BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005732
(680 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/695 (67%), Positives = 556/695 (80%), Gaps = 20/695 (2%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
KLY L + I+STN AI+ + +L AR LFDQMP RTVVSWNTM+ YSK
Sbjct: 60 KLYTAHQSNL----SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSK 115
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
+F E+L LV +MHRS++KL+E+TFS++LSVCA+L L DGK IHCLVLKSG E FE V
Sbjct: 116 HGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELV 175
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
GS LL+FYA+CFEI EA+RVFD L NE+LWSLMLVGYV CN+M DA VF+KMP++DV
Sbjct: 176 GSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDV 235
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
V WT LISG++K+ DGC KAL++FR M SGE PNE+TFD V+RAC RLG G+ VH
Sbjct: 236 VAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVH 295
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
GLL+KCG E+D SIGGAL+EFYC CEA D A+RV + NPCLNA NSLI GLISMGRIE
Sbjct: 296 GLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIE 355
Query: 302 DAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP---- 357
DAEL+FN +TE N +SYN MIKGYAV GQ+DDSKRLFEKMP R+I S NTMISV
Sbjct: 356 DAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGE 415
Query: 358 -----------EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
+ E++PVTWNSMISGY+ + E+AL+LY+TM +L+I +TRSTFS LFH
Sbjct: 416 IDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFH 475
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
ACSCLGSLQQGQLLHAHL+KTPFESNVYVGTSL+DMYS+CGSI +AQ SF SI SPNVAA
Sbjct: 476 ACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAA 535
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM- 525
WTAL+NG+++HGLGSEA+ LF+ M+EQ + PN ATFVGVLSAC RAGLVNEGMKIF SM
Sbjct: 536 WTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSME 595
Query: 526 KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
+ Y V PTLEHY CVVDLLGRSGH+ EAEEFIK MP+E D VVWGALLSACWFWM++EVG
Sbjct: 596 RCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVG 655
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
ER A+KMF D KPIS+YVILSNIYA LG+W +KM +RK L +VKKDPGCSWIELN++
Sbjct: 656 ERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNK 715
Query: 646 VHAFSVEDRNNPNCNVIYATLEHLTANLNSVVLFD 680
+H FS+EDR++P CN+IYATLEHLTAN+NSVV FD
Sbjct: 716 IHVFSIEDRSHPYCNMIYATLEHLTANINSVVHFD 750
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 976 bits (2523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/695 (67%), Positives = 555/695 (79%), Gaps = 20/695 (2%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
KLY L + I+STN AI+ + +L AR LFDQMP RTVVSWNTM+ YSK
Sbjct: 20 KLYTAHQSNL----SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSK 75
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
+F E+L LV +MHRS++KL+E+TFS++LSVCA+L L DGK IHCLVLKSG E FE V
Sbjct: 76 HGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELV 135
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
GS LL+FYA+CFEI EA+RVFD L NE+LWSLMLVGYV CN+M DA VF+KMP++DV
Sbjct: 136 GSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDV 195
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
V WT LISG++K+ DGC KAL++FR M SGE PNE+TFD V+RAC RLG G+ VH
Sbjct: 196 VAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVH 255
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
GLL+KCG E+D SIGGAL+EFYC CEA D A+RV + NPCLNA NSLI GLISMGRIE
Sbjct: 256 GLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIE 315
Query: 302 DAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP---- 357
DAEL+FN +TE N +SYN MIKGYAV GQ+DDSKRLFEKMP R+I S NTMISV
Sbjct: 316 DAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGE 375
Query: 358 -----------EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
+ E++PVTWNSMISGY+ + E+AL+LY+TM +L+I +T+STFS LFH
Sbjct: 376 IDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFH 435
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
ACSCLGSL QGQLLHAHL+KTPFESNVYVGTSL+DMYS+CGSI +AQ SF SI SPNVAA
Sbjct: 436 ACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAA 495
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM- 525
WTAL+NG+++HGLGSEA+ LF+ M+EQ + PN ATFVGVLSAC RAGLVNEGMKIF SM
Sbjct: 496 WTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSME 555
Query: 526 KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
+ Y V PTLEHY CVVDLLGRSGH+ EAEEFIK MP+E D VVWGALLSACWFWM++EVG
Sbjct: 556 RCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVG 615
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
ER A+KMF D KPIS+YVILSNIYA LG+W +KM +RK L +VKKDPGCSWIELN++
Sbjct: 616 ERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNK 675
Query: 646 VHAFSVEDRNNPNCNVIYATLEHLTANLNSVVLFD 680
+H FS+EDR++P CN+IYATLEHLTAN+NSVV FD
Sbjct: 676 IHVFSIEDRSHPYCNMIYATLEHLTANINSVVHFD 710
>gi|356519676|ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 728
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/694 (61%), Positives = 526/694 (75%), Gaps = 17/694 (2%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+L+ T QT ++STN +I + + G+L AR+LFDQMP RTV SWNTM+ GYS
Sbjct: 24 FRLFTTHLQTTEPHVGNVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYS 83
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
++ E+L+LVS MHRS V LNE +FS +LS CA+ S + GKQ+H L+LKSGYE F
Sbjct: 84 LLGRYPEALTLVSFMHRSCVALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGYERFGL 143
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
VGS LL+F +C I EA+ VF+EL + N++LWSLML GYV+ ++M DA D+F KMP +D
Sbjct: 144 VGSALLYFCVHCCGIREAEVVFEELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPVRD 203
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
VV WT LISGYAK DGCE+AL LF MR S E +PNE+T D V+R CARLG GKVV
Sbjct: 204 VVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVV 263
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC-LNASNSLINGLISMGR 299
HGL IK G +FD SIGGA+ EFYCGCEA D A RVY+ + LN +NSLI GL+S GR
Sbjct: 264 HGLCIKGGLDFDNSIGGAVTEFYCGCEAIDDAKRVYESMGGQASLNVANSLIGGLVSKGR 323
Query: 300 IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
IE+AEL+F L E N +SYN MIKGYA+ GQ + SKRLFEKM ++ SLNTMISV +
Sbjct: 324 IEEAELVFYELRETNPVSYNLMIKGYAMSGQFEKSKRLFEKMSPENLTSLNTMISVYSKN 383
Query: 360 ---------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
ERN V+WNSM+SGY+ N +++AL LY+ MR+L++D +RSTFSVL
Sbjct: 384 GELDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEALNLYVAMRRLSVDYSRSTFSVL 443
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
F ACSCL S +QGQLLHAHL+KTPF+ NVYVGT+LVD YS+CG + +AQ SF SI SPNV
Sbjct: 444 FRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQRSFISIFSPNV 503
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
AAWTAL+NGY++HGLGSEA+LLF ML Q IVPNAATFVGVLSAC AGLV EG++IF S
Sbjct: 504 AAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLRIFHS 563
Query: 525 M-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
M + YGV PT+EHYTCVVDLLGRSGHL EAEEFI MPIE D ++WGALL+A WFW +ME
Sbjct: 564 MQRCYGVTPTIEHYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGALLNASWFWKDME 623
Query: 584 VGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELN 643
VGERAA+K+F LD PI A+V+LSN+YA+LG+WG+K +RKRL LE++KDPGCSWIELN
Sbjct: 624 VGERAAEKLFSLDPNPIFAFVVLSNMYAILGRWGQKTKLRKRLQSLELRKDPGCSWIELN 683
Query: 644 SRVHAFSVEDRNNPNCNVIYATLEHLTANLNSVV 677
+++H FSVED+ + +VIYAT+EH+TA +NS++
Sbjct: 684 NKIHLFSVEDKTHLYSDVIYATVEHITATINSII 717
>gi|449527015|ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/689 (58%), Positives = 519/689 (75%), Gaps = 16/689 (2%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
++L++T + L T+ + I+STN I+ R+G L A+ LF++MP+R+VVSWN M+ GYS
Sbjct: 20 LELFSTLCEGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSWNIMISGYS 79
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
K+ K+ E+L+L S MH +NVKLNETTFS++LS+CA +GKQ HCLVLKSG + FE
Sbjct: 80 KFGKYSEALNLASEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFER 139
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
VGS L++FYAN +I AK+VFDELH+ N+LLW L+LVGYV+CNLM DA D+F+K+P +D
Sbjct: 140 VGSALVYFYANINDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRD 199
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
VV WT +IS YA+S C++ L+LF MR +GE PNE+TFDSV+RAC R+ GKVV
Sbjct: 200 VVAWTTMISAYARSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVV 259
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
HG+L K GF FD S+ ALI FYC CEA D A VYD +E PCL ASNSL+ GLI GRI
Sbjct: 260 HGILTKYGFHFDHSVCSALILFYCQCEAIDSAKAVYDSMERPCLKASNSLLEGLIFAGRI 319
Query: 301 EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP--- 357
DAE IF +L E N +SYN M+KGYA G+++ SKRLFE+M H++ SLNTMISV
Sbjct: 320 NDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSKRLFERMTHKTTSSLNTMISVYSRNG 379
Query: 358 ------------EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
+ E +PVTWNSMISGY+QN+ HE AL+LY+TM + +++R+RSTFS LF
Sbjct: 380 EIDKAFKLFESVKSEGDPVTWNSMISGYIQNHQHEGALKLYITMCRTSVERSRSTFSALF 439
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
AC+CL +Q GQ LH H ++ F+SNVYVGTSL+DMY++CGSI DAQ SF+S+ PNVA
Sbjct: 440 QACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCLPNVA 499
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
A+TAL+NGY HHGLG EA +F+ ML+ + PN AT +G+LSAC AG+V EGM +F SM
Sbjct: 500 AFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTVFHSM 559
Query: 526 -KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
K YGV+PTLEHY CVVDLLGRSG L+EAE FI+ MPIE D V+WGALL+ACWFWM++E+
Sbjct: 560 EKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFIRCMPIEADRVIWGALLNACWFWMDLEL 619
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
GE A+K+ LD K ISAY+ILSNIYA LGKW +K+++R++L L+VKK GCSWI++N+
Sbjct: 620 GESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRKLMSLKVKKIRGCSWIDVNN 679
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ FS DR++PNCN IY+TLEHL AN+
Sbjct: 680 KTCVFSAGDRSHPNCNAIYSTLEHLLANV 708
>gi|449456490|ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/689 (58%), Positives = 518/689 (75%), Gaps = 16/689 (2%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
++L++T + L T+ + I+STN I+ R+G L A+ LF++MP+R+VVSWN M+ GYS
Sbjct: 20 LELFSTLCEGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSWNIMISGYS 79
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
K+ K+ E+L+L S MH +NVKLNETTFS++LS+CA +GKQ HCLVLKSG + FE
Sbjct: 80 KFGKYSEALNLASEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFER 139
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
VGS L++FYAN +I AK+VFDELH+ N+LLW L+LVGYV+CNLM DA D+F+K+P +D
Sbjct: 140 VGSALVYFYANINDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRD 199
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
VV WT +IS YA+S C++ L+LF MR +GE PNE+TFDSV+RAC R+ GKVV
Sbjct: 200 VVAWTTMISAYARSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVV 259
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
HG+L K GF FD S+ ALI FYC CEA D A VYD +E PCL ASNSL+ GLI GRI
Sbjct: 260 HGILTKYGFHFDHSVCSALILFYCQCEAIDNAKAVYDSMERPCLKASNSLLEGLIFAGRI 319
Query: 301 EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP--- 357
DAE IF +L E N +SYN M+KGYA G+++ SKRLFE+M H++ SLNTMISV
Sbjct: 320 NDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSKRLFERMTHKTTSSLNTMISVYSRNG 379
Query: 358 ------------EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
+ E +PVTWNSMISG +QN+ HE AL+LY+TM + +++R+RSTFS LF
Sbjct: 380 EIDKAFKLFESVKSEGDPVTWNSMISGCIQNHQHEGALKLYITMCRTSVERSRSTFSALF 439
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
AC+CL +Q GQ LH H ++ F+SNVYVGTSL+DMY++CGSI DAQ SF+S+ PNVA
Sbjct: 440 QACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCFPNVA 499
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
A+TAL+NGY HHGLG EA +F+ ML+ + PN AT +G+LSAC AG+V EGM +F SM
Sbjct: 500 AFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTVFHSM 559
Query: 526 -KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
K YGV+PTLEHY CVVDLLGRSG L+EAE FI+ MPIE D V+WGALL+ACWFWM++E+
Sbjct: 560 EKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFIRCMPIEADRVIWGALLNACWFWMDLEL 619
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
GE A+K+ LD K ISAY+ILSNIYA LGKW +K+++R++L L+VKK GCSWI++N+
Sbjct: 620 GESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRQLMSLKVKKIRGCSWIDVNN 679
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ FS DR++PNCN IY+TLEHL AN+
Sbjct: 680 KTCVFSAGDRSHPNCNAIYSTLEHLLANV 708
>gi|357475531|ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509106|gb|AES90248.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 763
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/680 (58%), Positives = 497/680 (73%), Gaps = 17/680 (2%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++STN +I + G+LV AR++FD+MP+RTV SWNTM+ GYS+W K+ E+L+LVS MH
Sbjct: 37 VISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHS 96
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S VK NE +FS LS C + SL GKQIH L+ KSGY+ F VGS LL +Y C I E
Sbjct: 97 SCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIRE 156
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VF+EL ++N +LWSLML GYVQ +++ DA ++F KMP +DVV WT LISGYAK DG
Sbjct: 157 AEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDG 216
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
CE+AL LF MR S E +PNE+T D V+R CARL GKVVHGL IK GF+FD S+
Sbjct: 217 CERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSS 276
Query: 258 ALIEFYCGCEAFDGAMRVYDRL-ENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
AL EFYC +A D A RVY+ + C N ++SLI GL+SMGR+++A +IF L + I
Sbjct: 277 ALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGLRDKTLI 336
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM---------------ER 361
S N MIKGYA+ GQ SK+LFEKM + + SLNTMI+V + ER
Sbjct: 337 SNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGER 396
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
N VTWNSM+SGY+ N H +AL+LY+TMR+ ++ +RSTFSVLF AC+ L S QQGQLLH
Sbjct: 397 NCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLH 456
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
AHL KTP++ NVYVGT+LVD YS+CG + DAQ SF+SI SPNVAAWTAL+NGY++HG GS
Sbjct: 457 AHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGS 516
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCV 540
EA+ F ML+Q +VPNAATFV VLSAC AGLV+EG+K F SM+ +Y + PT+EHYTCV
Sbjct: 517 EAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCV 576
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
VDLLGRSG + EAEEFI MPI+ D V+WGALL+A FW N+E+GERAA K+F LD +
Sbjct: 577 VDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGERAAVKLFSLDPNSV 636
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
SA V LSN+YA G+WGKK IRKRL LE++KD G SWIELN+ VH FSVED +P +
Sbjct: 637 SALVTLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNVHLFSVEDTTHPYSD 696
Query: 661 VIYATLEHLTANLNSVVLFD 680
VIY T+EH+TA +NS+V F+
Sbjct: 697 VIYKTVEHITATINSIVPFN 716
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD------- 66
++ ++S N I +GQ ++ LF++M ++ + S NTM+ YSK + D
Sbjct: 331 RDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFD 390
Query: 67 -------------------------ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLI 101
E+L L TM R V+ + +TFS + CA L S
Sbjct: 391 KTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQ 450
Query: 102 DGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYV 161
G+ +H + K+ Y+ +VG+ L+ FY+ C + +A+R F + N W+ ++ GY
Sbjct: 451 QGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYA 510
Query: 162 QCNLMSDAFDVFIKMPKKDVV----VWTKLISG--YAKSVDGCEKALKLFRWMRESGENM 215
S+A F M + VV + ++S +A VD + LK F M+ +
Sbjct: 511 YHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVD---EGLKFFHSMQINYRIT 567
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
P + V+ R G E + +I+ + D I GAL+ C
Sbjct: 568 PTIEHYTCVVDLLGRSGRVKEAE---EFIIQMPIKADGVIWGALLNASC 613
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 58/269 (21%)
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
P + ++N I G++ +A +F+ + S+N+MI GY+ +G+ ++ L M
Sbjct: 35 PHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFM 94
Query: 342 PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
H S + N + +F
Sbjct: 95 -HSSCVKFNEV-----------------------------------------------SF 106
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
S AC+ GSL G+ +H+ L K+ ++ VG++L+ Y +C I +A+ F +
Sbjct: 107 SACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRD 166
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS---ACVRAGLVNEG 518
N W+ ++ GY + +A+ +FE M +D+V G C RA
Sbjct: 167 ENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERA------ 220
Query: 519 MKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
+ +F M +S V+P CV+ + R
Sbjct: 221 LDLFGCMRRSSEVLPNEFTLDCVLRVCAR 249
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 35/202 (17%)
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
P+ +V + +++ G + +A+ F + V++W +++GYS G +EA+ L
Sbjct: 32 PYPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLV 91
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI----FRS-MKSYGVVPT-LEHYTC-- 539
M + N +F LSAC R G + G +I F+S + +G V + L HY
Sbjct: 92 SFMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQC 151
Query: 540 --------VVDLLGRSGH---------------LHEAEEFIKDMPIELDAVVWGALLSAC 576
V + L H + +A E + MP+ D V W L+S
Sbjct: 152 CGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVR-DVVAWTTLISG- 209
Query: 577 WFWMNMEVGERAAQKMFGLDKK 598
+ E G A +FG ++
Sbjct: 210 --YAKREDGCERALDLFGCMRR 229
>gi|255545044|ref|XP_002513583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547491|gb|EEF48986.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/540 (63%), Positives = 417/540 (77%), Gaps = 15/540 (2%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+K Y+T + + VSTN AIT GQL AR LFD+MP RT VSWNTM+ Y
Sbjct: 18 VKCYSTHVHVSRSDDPCTVSTNIAITRYAIKGQLDFARCLFDKMPQRTSVSWNTMISSYL 77
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
KW KF ES SL+S MHRSN +L+ETTFSTILSVC + S DGKQIHCLVLKSG FE
Sbjct: 78 KWGKFKESFSLLSLMHRSNTQLDETTFSTILSVCTRTQSFCDGKQIHCLVLKSGCGSFEL 137
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
VGS LL+FY NC +I++AKRVFDELH+ NE++WS M+V YVQ L++DA+D+F+KMPKK+
Sbjct: 138 VGSVLLYFYGNCSQIDDAKRVFDELHDKNEVVWSSMVVCYVQRGLLTDAYDLFVKMPKKE 197
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
VV W+KLISGYAKS EKAL+LF+ MRESGE +PNE+T DSVIR C +LGA EG VV
Sbjct: 198 VVSWSKLISGYAKSEVRSEKALELFQLMRESGEVLPNEFTLDSVIRVCGKLGALSEGMVV 257
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
HG+LIK GFEFD+SI GAL++FYC CEA D A R+YD + PC +ASNSLI G + +GRI
Sbjct: 258 HGILIKTGFEFDQSISGALVQFYCDCEAIDDAKRIYDGIAYPCSSASNSLIEGYVLLGRI 317
Query: 301 EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP--- 357
+DA+LIFNR TE NS N M+K Y++ G+V+DSK LFEKMP ++IIS NTMISV
Sbjct: 318 KDADLIFNRATEKNSALCNLMVKAYSMSGRVEDSKTLFEKMPQKTIISSNTMISVYSRNG 377
Query: 358 ------------EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
+ +RNPVTWNSM+SGYVQN HE+AL+LY+TM++ ++D TRSTFSVLF
Sbjct: 378 ELDKALMLFEQTKDQRNPVTWNSMLSGYVQNEQHEEALKLYVTMKRSSVDCTRSTFSVLF 437
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
ACS +GSLQQG++LHA+L+KTPF SNVYVGTSLVDMYS+CGSI DA+ SFSSIS+PNVA
Sbjct: 438 RACSYIGSLQQGKMLHANLIKTPFASNVYVGTSLVDMYSKCGSIFDAKKSFSSISAPNVA 497
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
AWTAL+NGY+HHG GSEA+LLF+ MLEQ +VPN ATFVG+L+AC RAGL E + + +
Sbjct: 498 AWTALINGYAHHGFGSEAILLFQHMLEQKVVPNGATFVGILTACDRAGLTAEAVPFIQEV 557
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 188/406 (46%), Gaps = 60/406 (14%)
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
+F KMP++ V W +IS Y K +++ L M S + +E TF +++ C R
Sbjct: 57 LFDKMPQRTSVSWNTMISSYLK-WGKFKESFSLLSLMHRSNTQL-DETTFSTILSVCTRT 114
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
+FC+GK +H L++K G E +G L+ FY C
Sbjct: 115 QSFCDGKQIHCLVLKSGCGSFELVGSVLLYFYGNC------------------------- 149
Query: 292 NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
+I+DA+ +F+ L + N + ++SM+ Y G + D+ LF KMP + ++S
Sbjct: 150 ------SQIDDAKRVFDELHDKNEVVWSSMVVCYVQRGLLTDAYDLFVKMPKKEVVS--- 200
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLH-EKALQLYMTMRKLA-IDRTRSTFSVLFHACS 409
W+ +ISGY ++ + EKAL+L+ MR+ + T + C
Sbjct: 201 --------------WSKLISGYAKSEVRSEKALELFQLMRESGEVLPNEFTLDSVIRVCG 246
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
LG+L +G ++H L+KT FE + + +LV Y C +I+DA+ + I+ P +A +
Sbjct: 247 KLGALSEGMVVHGILIKTGFEFDQSISGALVQFYCDCEAIDDAKRIYDGIAYPCSSASNS 306
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
L+ GY G +A L+F E+ N+A ++ A +G V + +F M
Sbjct: 307 LIEGYVLLGRIKDADLIFNRATEK----NSALCNLMVKAYSMSGRVEDSKTLFEKMPQKT 362
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ + ++ + R+G L +A + + + V W ++LS
Sbjct: 363 IISS----NTMISVYSRNGELDKALMLFEQTKDQRNPVTWNSMLSG 404
>gi|38347497|emb|CAE05845.2| OSJNBa0091C07.7 [Oryza sativa Japonica Group]
Length = 749
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/656 (49%), Positives = 460/656 (70%), Gaps = 17/656 (2%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
AR +FD M R +SWN + +++ + ++L + MHRS L+E T+++ L CA
Sbjct: 64 AARGVFDGMRRRAALSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACA 123
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+ L G Q+HC V+KSG + F VG+ LL FY++C +++ A+ +FD LH +NELLWS
Sbjct: 124 RGRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSP 183
Query: 156 MLVGYVQCNLMSDAFDVFIKMPK-KDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGE 213
M+V V+ NL+SDA D+ +MP +D+ WT +ISGYA+ + C K+L+LF +
Sbjct: 184 MVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDG 243
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
MPNE+T+DSV+RAC ++GA G+ +HG LI+ GFE ++ I AL++ YC A D A+
Sbjct: 244 VMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAV 303
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
VY+ L+ P L SN+LI G ISMGR EDA+L+F+++TE +S SYN MIK YA G+++D
Sbjct: 304 MVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLED 363
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEM---------------ERNPVTWNSMISGYVQNNL 378
+R+FE MP R++++LN+M+SV+ + ERN VTWNSMISGYVQN+
Sbjct: 364 CRRMFEMMPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQ 423
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+AL+L+ M +L+I+ + STF L HAC+ +G+++QG+++HA L KTPFESN YVGT+
Sbjct: 424 SSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTA 483
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
LVDMYS+CG ++DA+A+FS I SPNVA+WT+L+NG + +G EA++ F ML+ ++ PN
Sbjct: 484 LVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPN 543
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
TF+G+L A RAGLVN+GM+ F SM+SYGVVPT+EHYTC VDLLGR+ + EAE+FI
Sbjct: 544 EITFLGILMASARAGLVNKGMRFFHSMESYGVVPTVEHYTCAVDLLGRARRVREAEKFIS 603
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
MPI D VVWGALL+ACW+ M++E+GE+ A+K+F + K ISAYV +SNIYA LGKW
Sbjct: 604 KMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWED 663
Query: 619 KMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+ +R RL + KK+PGCSWIE+ VH F VEDRN+P IY LE L +N++
Sbjct: 664 VVKVRTRLRSINAKKEPGCSWIEVKDMVHVFLVEDRNHPEREEIYLMLEDLVSNIS 719
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 169/417 (40%), Gaps = 106/417 (25%)
Query: 34 LVTARNLFDQM--------------------------------PIRTVVSWNTMLCGYSK 61
L AR LFD + P R + +W ++ GY++
Sbjct: 163 LDAARTLFDTLHANNELLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYAR 222
Query: 62 WAKFD--ESLSL-VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF 118
A +SL L V + V NE T+ ++L C ++ +L G+ IH +++SG+E
Sbjct: 223 GANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESE 282
Query: 119 EFVGSGLLFFYANCFEI-------------------------------EEAKRVFDELHE 147
+ + S L+ Y + E+AK VF ++ E
Sbjct: 283 QLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTE 342
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV-------------------------- 181
+ ++LM+ Y + D +F MP++++
Sbjct: 343 HDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQI 402
Query: 182 ------VVWTKLISGYAKSVDGCEKALKLFRWM-RESGENMPNEYTFDSVIRACARLGAF 234
V W +ISGY ++ D +ALKLF M R S E + TF +++ ACA +G
Sbjct: 403 KDERNTVTWNSMISGYVQN-DQSSEALKLFAVMCRLSIEC--SASTFPALLHACATIGTI 459
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
+GK+VH LL K FE + +G AL++ Y C A + + +P + + SLINGL
Sbjct: 460 EQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGL 519
Query: 295 ISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
G +A + F R+ + N I++ ++ A G V+ R F M ++
Sbjct: 520 AQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSMESYGVV 576
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 34/221 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPI-RTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
+V+ N ++ +NG+L R LF+Q+ R V+WN+M+ GY + + E+L L + M
Sbjct: 376 MVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAVMC 435
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R +++ + +TF +L CA + ++ GK +H L+ K+ +E +VG+ L+ Y+ C +
Sbjct: 436 RLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVS 495
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+A+ F + N V WT LI+G A++
Sbjct: 496 DARAAFSCIMSPN-------------------------------VASWTSLINGLAQNGH 524
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
E ++ R ++ + + PNE TF ++ A AR G +G
Sbjct: 525 WMEAIVQFARMLKNNVK--PNEITFLGILMASARAGLVNKG 563
>gi|357167336|ref|XP_003581113.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Brachypodium distachyon]
Length = 687
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/660 (49%), Positives = 460/660 (69%), Gaps = 17/660 (2%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
+G AR LFD M RTVV+WN M+ G+++ F ++L L + MHRS V +E TF+++
Sbjct: 9 SGDTAAARRLFDGMRRRTVVTWNAMVAGHARCGSFLDALDLAARMHRSGVSPSEATFASV 68
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L CA+ L G Q+HC V+KSG E FE VG+ LL FY++CF++ A +FD LH NE
Sbjct: 69 LGACARGRRLCVGAQVHCQVVKSGSENFEVVGASLLDFYSSCFDLSAAHMLFDTLHPRNE 128
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSV-DGCEKALKLFRWM 208
LWS M+V V+ NL+SDA D+ +MP +DV WT +ISGYA+ D C KA+ LF M
Sbjct: 129 RLWSPMVVALVRFNLLSDALDLLDRMPAPRDVFAWTAVISGYARGASDCCRKAIGLFVRM 188
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
MPNE+TFDSV+RAC ++GA G+ VHG L++ GF+ D+ I AL++ YC +A
Sbjct: 189 LADHGVMPNEFTFDSVLRACVKMGALDFGRSVHGCLLRSGFDTDKLITSALVDLYCSSDA 248
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
A+ VY+ LE P L SN+LI GLISM ++A+++F+++ E +S +YN MIK Y +
Sbjct: 249 VADALLVYNDLEMPSLITSNALIGGLISMHMTDEAKIVFSQMPEHDSSTYNLMIKAYGIE 308
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEM---------------ERNPVTWNSMISGY 373
G+++ +R+FEKMP R+I++LN+M+SV+ + ERN +TWNSMISGY
Sbjct: 309 GKLEQCQRMFEKMPRRNIVTLNSMMSVLLQNGKLEEGLKLFEQIKDERNTITWNSMISGY 368
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
+QNN +AL+L++TMR+L+I + STF L HAC +G+++QG+++HAHL KTPFESN
Sbjct: 369 IQNNHSSEALKLFVTMRRLSIICSPSTFPTLLHACGTVGTIEQGKMVHAHLCKTPFESNG 428
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
YVGT+LVDMYS+CG ++DA +F I+SPNVA+WT+++NG +H+G +A++ F ML
Sbjct: 429 YVGTALVDMYSKCGCVSDALDAFCCITSPNVASWTSVINGLAHNGQCLKAIVEFGRMLRH 488
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
I PN TF+G+L A RAGLVN+GM+ F SM+ YG++PT+EHYTC VDLLGR+G + EA
Sbjct: 489 RINPNEITFLGLLMASSRAGLVNKGMRFFHSMERYGLLPTVEHYTCAVDLLGRNGRIIEA 548
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
E+FI MP+ D V WGALL+ACW+ M++E+GE+ A+K+F + K SAYV +SNIYA L
Sbjct: 549 EKFISAMPVPADGVAWGALLTACWYSMDLEMGEKVAEKLFFMGTKHKSAYVAMSNIYAKL 608
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
GKW + +R RL L+ KK+PGCSWI + VH F VEDRN+P + IY LE L +N+
Sbjct: 609 GKWEDVVKVRTRLRSLDAKKEPGCSWIGVKDTVHVFLVEDRNHPERDEIYLMLEDLVSNI 668
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 65/248 (26%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVV------------------------------- 50
N I G G+L + +F++MP R +V
Sbjct: 299 NLMIKAYGIEGKLEQCQRMFEKMPRRNIVTLNSMMSVLLQNGKLEEGLKLFEQIKDERNT 358
Query: 51 -SWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCL 109
+WN+M+ GY + E+L L TM R ++ + +TF T+L C + ++ GK +H
Sbjct: 359 ITWNSMISGYIQNNHSSEALKLFVTMRRLSIICSPSTFPTLLHACGTVGTIEQGKMVHAH 418
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
+ K+ +E +VG+ L+ Y+ +C +SDA
Sbjct: 419 LCKTPFESNGYVGTALVDMYS-------------------------------KCGCVSDA 447
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
D F + +V WT +I+G A + C KA+ F M N PNE TF ++ A +
Sbjct: 448 LDAFCCITSPNVASWTSVINGLAHN-GQCLKAIVEFGRMLRHRIN-PNEITFLGLLMASS 505
Query: 230 RLGAFCEG 237
R G +G
Sbjct: 506 RAGLVNKG 513
>gi|125589995|gb|EAZ30345.1| hypothetical protein OsJ_14392 [Oryza sativa Japonica Group]
Length = 704
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/642 (49%), Positives = 453/642 (70%), Gaps = 17/642 (2%)
Query: 50 VSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCL 109
+SWN + +++ + ++L + MHRS L+E T+++ L CA+ L G Q+HC
Sbjct: 33 LSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQ 92
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
V+KSG + F VG+ LL FY++C +++ A+ +FD LH +NELLWS M+V V+ NL+SDA
Sbjct: 93 VVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDA 152
Query: 170 FDVFIKMP-KKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRA 227
D+ +MP +D+ WT +ISGYA+ + C K+L+LF + MPNE+T+DSV+RA
Sbjct: 153 LDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRA 212
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
C ++GA G+ +HG LI+ GFE ++ I AL++ YC A D A+ VY+ L+ P L S
Sbjct: 213 CVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITS 272
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N+LI G ISMGR EDA+L+F+++TE +S SYN MIK YA G+++D +R+FE MP R+++
Sbjct: 273 NTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMV 332
Query: 348 SLNTMISVIPEM---------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+LN+M+SV+ + ERN VTWNSMISGYVQN+ +AL+L+ M +L
Sbjct: 333 TLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAVMCRL 392
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+I+ + STF L HAC+ +G+++QG+++HA L KTPFESN YVGT+LVDMYS+CG ++DA
Sbjct: 393 SIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDA 452
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+A+FS I SPNVA+WT+L+NG + +G EA++ F ML+ ++ PN TF+G+L A RA
Sbjct: 453 RAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARA 512
Query: 513 GLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
GLVN+GM+ F SM+SYGVVPT+EHYTC VDLLGR+ + EAE+FI MPI D VVWGAL
Sbjct: 513 GLVNKGMRFFHSMESYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGAL 572
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
L+ACW+ M++E+GE+ A+K+F + K ISAYV +SNIYA LGKW + +R RL + K
Sbjct: 573 LTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWEDVVKVRTRLRSINAK 632
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
K+PGCSWIE+ VH F VEDRN+P IY LE L +N++
Sbjct: 633 KEPGCSWIEVKDMVHVFLVEDRNHPEREEIYLMLEDLVSNIS 674
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 169/417 (40%), Gaps = 106/417 (25%)
Query: 34 LVTARNLFDQM--------------------------------PIRTVVSWNTMLCGYSK 61
L AR LFD + P R + +W ++ GY++
Sbjct: 118 LDAARTLFDTLHANNELLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYAR 177
Query: 62 WAK--FDESLSL-VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF 118
A +SL L V + V NE T+ ++L C ++ +L G+ IH +++SG+E
Sbjct: 178 GANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESE 237
Query: 119 EFVGSGLLFFYANCFEI-------------------------------EEAKRVFDELHE 147
+ + S L+ Y + E+AK VF ++ E
Sbjct: 238 QLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTE 297
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV-------------------------- 181
+ ++LM+ Y + D +F MP++++
Sbjct: 298 HDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQI 357
Query: 182 ------VVWTKLISGYAKSVDGCEKALKLFRWM-RESGENMPNEYTFDSVIRACARLGAF 234
V W +ISGY ++ D +ALKLF M R S E + TF +++ ACA +G
Sbjct: 358 KDERNTVTWNSMISGYVQN-DQSSEALKLFAVMCRLSIEC--SASTFPALLHACATIGTI 414
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
+GK+VH LL K FE + +G AL++ Y C A + + +P + + SLINGL
Sbjct: 415 EQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGL 474
Query: 295 ISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
G +A + F R+ + N I++ ++ A G V+ R F M ++
Sbjct: 475 AQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSMESYGVV 531
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 34/221 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPI-RTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
+V+ N ++ +NG+L R LF+Q+ R V+WN+M+ GY + + E+L L + M
Sbjct: 331 MVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAVMC 390
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R +++ + +TF +L CA + ++ GK +H L+ K+ +E +VG+ L+ Y+ C +
Sbjct: 391 RLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVS 450
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+A+ F + N V WT LI+G A++
Sbjct: 451 DARAAFSCIMSPN-------------------------------VASWTSLINGLAQNGH 479
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
E ++ R ++ + + PNE TF ++ A AR G +G
Sbjct: 480 WMEAIVQFARMLKNNVK--PNEITFLGILMASARAGLVNKG 518
>gi|242092962|ref|XP_002436971.1| hypothetical protein SORBIDRAFT_10g012871 [Sorghum bicolor]
gi|241915194|gb|EER88338.1| hypothetical protein SORBIDRAFT_10g012871 [Sorghum bicolor]
Length = 726
Score = 639 bits (1649), Expect = e-180, Method: Compositional matrix adjust.
Identities = 310/664 (46%), Positives = 454/664 (68%), Gaps = 23/664 (3%)
Query: 28 CGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTF 87
CGR R LFD R VSWN M+ G+++ ++L + MH S E TF
Sbjct: 65 CGRT------RYLFDGTRHRDAVSWNAMVSGHARRGNVPDALGTAARMHSSGQPFTEATF 118
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
++++ CA+ G Q H V+KSG E +G+ LL FY++CF++ + +F+ LH+
Sbjct: 119 ASVVGACARGRMFRAGTQAHGQVIKSGCEGSAVIGASLLDFYSSCFDLRATRALFESLHQ 178
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVDGC-EKALKLF 205
NELLWS M+V V+ L+++A D+ P ++DV WT +ISGYAK D C KAL+LF
Sbjct: 179 RNELLWSPMVVALVRFGLLAEALDLLQITPARRDVFAWTAVISGYAKGTDQCCGKALQLF 238
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
+ MPNEYT+D V+RAC RLGA G+ VHG LI+CGF ++ I AL++ YC
Sbjct: 239 VKLLADDGAMPNEYTYDCVLRACVRLGALDFGRSVHGCLIRCGFWCEQLITSALVDLYCT 298
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
+A D A+ VY+ L+ P L SN+LI GLIS+GR EDA+++F+++ E +S SYN MIK Y
Sbjct: 299 SDALDDALLVYNDLDRPPLITSNTLIAGLISIGRTEDAKMVFSQMPEQDSGSYNLMIKAY 358
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM---------------ERNPVTWNSMI 370
A+ G+++ +R+FEKMP R+++SLN+M+SV+ + ER+ VTWNSMI
Sbjct: 359 AMEGKLEHCRRMFEKMPKRNMVSLNSMMSVLLQNGRLEEGLKLFKQIKDERDTVTWNSMI 418
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
SGY+QN+ +AL+L++ M +L I + STFS L HAC+ +G+L+QG+++HAHL KT F+
Sbjct: 419 SGYIQNDEPSEALKLFVVMCRLYIGCSPSTFSALLHACATIGTLEQGRMIHAHLCKTSFD 478
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
SN +VGT+L DMY +CG + DA+++F+ ++SPNVA+WT L+NG + +GL EA+L F M
Sbjct: 479 SNGHVGTALADMYFKCGCVIDARSAFTYVTSPNVASWTCLVNGLAQNGLWLEALLQFGRM 538
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
L+ + PN TF+G+L A RAGLVN+GMKIF SM+++G+VPT++HYTC VDLLGR+GH
Sbjct: 539 LKHHVSPNEITFLGLLMASARAGLVNKGMKIFYSMENFGLVPTVQHYTCAVDLLGRTGHT 598
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
EAE+FI +MP+ D ++W ALL+ACW+ +++E+GE+ AQ++F + K SAYV +SNIY
Sbjct: 599 REAEKFIYEMPLPADGIIWEALLTACWYSVDLEMGEKVAQRLFLMGTKHRSAYVAMSNIY 658
Query: 611 AVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
A LGKW + +R ++ L KK+PGCSWIE+ VH F V+D+N+P + +Y+ LE L
Sbjct: 659 AKLGKWEDVVKVRTQMRSLNEKKEPGCSWIEIKDIVHIFLVDDQNHPERDHVYSMLEGLV 718
Query: 671 ANLN 674
++++
Sbjct: 719 SHIS 722
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 111/286 (38%), Gaps = 51/286 (17%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVS---------------------------- 51
S N I G+L R +F++MP R +VS
Sbjct: 350 SYNLMIKAYAMEGKLEHCRRMFEKMPKRNMVSLNSMMSVLLQNGRLEEGLKLFKQIKDER 409
Query: 52 ----WNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIH 107
WN+M+ GY + + E+L L M R + + +TFS +L CA + +L G+ IH
Sbjct: 410 DTVTWNSMISGYIQNDEPSEALKLFVVMCRLYIGCSPSTFSALLHACATIGTLEQGRMIH 469
Query: 108 CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
+ K+ ++ VG+ L Y C + +A+ F + N W+ ++ G Q L
Sbjct: 470 AHLCKTSFDSNGHVGTALADMYFKCGCVIDARSAFTYVTSPNVASWTCLVNGLAQNGLWL 529
Query: 168 DAFDVFIKMPKKDV----VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+A F +M K V + + L+ A++ K +K+F M G +P +
Sbjct: 530 EALLQFGRMLKHHVSPNEITFLGLLMASARA-GLVNKGMKIFYSMENFGL-VPTVQHYTC 587
Query: 224 VIRACARLGAFCE-------------GKVVHGLLIKCGFEFDESIG 256
+ R G E G + LL C + D +G
Sbjct: 588 AVDLLGRTGHTREAEKFIYEMPLPADGIIWEALLTACWYSVDLEMG 633
>gi|218201765|gb|EEC84192.1| hypothetical protein OsI_30581 [Oryza sativa Indica Group]
Length = 715
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 310/642 (48%), Positives = 442/642 (68%), Gaps = 23/642 (3%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
AR +FD M R +SWN + +++ + ++L + MHRS L+E T+++ L CA
Sbjct: 64 AARGVFDGMRRRAALSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACA 123
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+ L G Q+HC V+KSG + F VG+ LL FY++C +++ A+ +FD LH +NELLWS
Sbjct: 124 RGRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSP 183
Query: 156 MLVGYVQCNLMSDAFDVFIKMPK-KDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGE 213
M+V V+ NL+SDA D+ +MP +D+ WT +ISGYA+ + C K+L+LF +
Sbjct: 184 MVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDG 243
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
MPNE+T+DSV+RAC ++GA G+ +HG LI+ GFE ++ I AL++ YC A D A+
Sbjct: 244 VMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAV 303
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
VY+ L+ P L SN+LI G ISMGR EDA+L+F+++TE +S SYN MIK YA G+++D
Sbjct: 304 MVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLED 363
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
+R+FE MP R++++LN+M+SV+ +QN E+ +L+ +R
Sbjct: 364 CRRMFEMMPRRNMVTLNSMMSVL-----------------LQNGKLEEGRKLFEQIR--- 403
Query: 394 IDRTR-STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ TR STF L HAC+ +G+++QG+++HA L KTPFESN YVGT+LVDMYS+CG ++DA
Sbjct: 404 MKGTRASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDA 463
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+A+FS I SPNVA+WT+L+NG + +G EA++ F ML+ ++ PN TF+G+L A RA
Sbjct: 464 RAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARA 523
Query: 513 GLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
GLVN+GM+ F SM+SYGVVPT+EHYTC VDLLGR+ + EAE+FI MPI D VVWGAL
Sbjct: 524 GLVNKGMRFFHSMESYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGAL 583
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
L+ACW+ M++E+GE+ A+K+F + K ISAYV +SNIYA LGKW + +R RL + K
Sbjct: 584 LTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWEDVVKVRTRLRSINAK 643
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
K+PGCSWIE+ VH F VEDRN+P IY LE L +N++
Sbjct: 644 KEPGCSWIEVKDMVHVFLVEDRNHPEREEIYLMLEDLVSNIS 685
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 162/384 (42%), Gaps = 74/384 (19%)
Query: 34 LVTARNLFDQM--------------------------------PIRTVVSWNTMLCGYSK 61
L AR LFD + P R + +W ++ GY++
Sbjct: 163 LDAARTLFDTLHANNELLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYAR 222
Query: 62 WAKFD--ESLSL-VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF 118
A +SL L V + V NE T+ ++L C ++ +L G+ IH +++SG+E
Sbjct: 223 GANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESE 282
Query: 119 EFVGSGLLFFYANCFEI-------------------------------EEAKRVFDELHE 147
+ + S L+ Y + E+AK VF ++ E
Sbjct: 283 QLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTE 342
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
+ ++LM+ Y + D +F MP++++V ++S ++ E+ KLF
Sbjct: 343 HDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVLLQN-GKLEEGRKLFEQ 401
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
+R G TF +++ ACA +G +GK+VH LL K FE + +G AL++ Y C
Sbjct: 402 IRMKGTRAS---TFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCG 458
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK 323
A + + +P + + SLINGL G +A + F R+ + N I++ ++
Sbjct: 459 CVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILM 518
Query: 324 GYAVYGQVDDSKRLFEKMPHRSII 347
A G V+ R F M ++
Sbjct: 519 ASARAGLVNKGMRFFHSMESYGVV 542
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N I G+L R +F+ MP R +V+ N+M+ + K +E L +
Sbjct: 347 SYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQIRMKG 406
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ +TF +L CA + ++ GK +H L+ K+ +E +VG+ L+ Y+ C + +A+
Sbjct: 407 TR--ASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDAR 464
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
F + N V WT LI+G A++ E
Sbjct: 465 AAFSCIMSPN-------------------------------VASWTSLINGLAQNGHWME 493
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
++ R ++ + + PNE TF ++ A AR G +G
Sbjct: 494 AIVQFARMLKNNVK--PNEITFLGILMASARAGLVNKG 529
>gi|413918046|gb|AFW57978.1| hypothetical protein ZEAMMB73_147394 [Zea mays]
Length = 729
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 303/654 (46%), Positives = 446/654 (68%), Gaps = 17/654 (2%)
Query: 38 RNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQL 97
R LFD R +SWN ++ G+++ ++L + MH S V E TF++++ CA+
Sbjct: 61 RYLFDGTRHRDAISWNAVVSGHARHGNVPDALDTAARMHSSGVPFTEATFASVVGACARG 120
Query: 98 NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
G Q H V+KSG E F G+ LL FY++CF++ + +F+ L NELLWS M+
Sbjct: 121 RMFCAGTQAHGQVIKSGCEGFAVTGASLLDFYSSCFDLRATRTLFESLRPKNELLWSPMV 180
Query: 158 VGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENM 215
V V+ L+++A D+ P +DV WT +ISGYAK D C KAL+LF + M
Sbjct: 181 VALVRFGLLAEALDLLQNTPAPRDVFAWTAVISGYAKGTDQCCGKALQLFVKLLADDGVM 240
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PNEYT+DSV+RAC RLGA G+ VHG LI+CGF ++ I AL++ YC +A D A+ V
Sbjct: 241 PNEYTYDSVLRACVRLGALDFGRSVHGCLIRCGFRSEQLITSALVDLYCTSDALDDALLV 300
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
Y+ L+ P SN+LI GLIS+GR E A+++F+++ E +S SYN MIK YA+ G+++ +
Sbjct: 301 YNDLDRPSSITSNTLIAGLISIGRTEHAKMVFSQMPEQDSGSYNLMIKAYAMEGELEHCR 360
Query: 336 RLFEKMPHRSIISLNTMISVIPEM---------------ERNPVTWNSMISGYVQNNLHE 380
R+FEKMP R+++SLN+M+SV+ + ER+ +TWNSMISGY+QN+
Sbjct: 361 RIFEKMPRRNMVSLNSMMSVLLQNGRLEEGLKLFKQIKDERDTITWNSMISGYIQNDKPS 420
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+AL+L++ M +L+I+ + STFS L HAC+ +G+L+QG+++H HL KT F+S+ +VGT+L
Sbjct: 421 EALKLFVVMCRLSIECSPSTFSALLHACATIGTLEQGRMVHCHLCKTSFDSSDHVGTALA 480
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
DMY +CG + DAQ++F+ ++SPNVA+WT+L+NG + +G EA+ F ML+ + PN
Sbjct: 481 DMYFKCGCVIDAQSAFTYVTSPNVASWTSLINGLAQNGHWLEALSQFGRMLKHHVKPNEI 540
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
TF+G+L A RAGLVN+GMKIF SM+++G+VPT++H TCVVDLLGR+G EAE+FI +M
Sbjct: 541 TFLGLLMASARAGLVNKGMKIFYSMENFGLVPTVQHCTCVVDLLGRTGRTREAEKFIYEM 600
Query: 561 PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKM 620
P+ D V+WGALL+ACW+ M++E+GE+ AQ++F + K SAYV +SNIYA LGKW +
Sbjct: 601 PLPADGVIWGALLTACWYSMDLEMGEKVAQRLFFMGTKHRSAYVAMSNIYAKLGKWEDVV 660
Query: 621 DIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+R L L +K+PGCSWIE+ VH F V+D+N+P +Y+ LE L ++++
Sbjct: 661 KVRTWLRSLNAEKEPGCSWIEIKGIVHVFLVDDQNHPERETMYSMLEALVSHIS 714
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 65/250 (26%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVS---------------------------- 51
S N I G+L R +F++MP R +VS
Sbjct: 342 SYNLMIKAYAMEGELEHCRRIFEKMPRRNMVSLNSMMSVLLQNGRLEEGLKLFKQIKDER 401
Query: 52 ----WNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIH 107
WN+M+ GY + K E+L L M R +++ + +TFS +L CA + +L G+ +H
Sbjct: 402 DTITWNSMISGYIQNDKPSEALKLFVVMCRLSIECSPSTFSALLHACATIGTLEQGRMVH 461
Query: 108 CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
C + K+ ++ + VG+ L Y +C +
Sbjct: 462 CHLCKTSFDSSDHVGTALADMY-------------------------------FKCGCVI 490
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
DA F + +V WT LI+G A++ E + R ++ + PNE TF ++ A
Sbjct: 491 DAQSAFTYVTSPNVASWTSLINGLAQNGHWLEALSQFGRMLKHHVK--PNEITFLGLLMA 548
Query: 228 CARLGAFCEG 237
AR G +G
Sbjct: 549 SARAGLVNKG 558
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/704 (33%), Positives = 363/704 (51%), Gaps = 122/704 (17%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVV------------------ 50
QT +E I N+ I G+ G L AR +FD+M R V
Sbjct: 52 QTPFCEEVFI--QNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGFVDES 109
Query: 51 -------------SWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQL 97
SWN+M+ G+++ +F+E+L MHR + LN+ +F + LS C++L
Sbjct: 110 AWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRL 169
Query: 98 NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
L G QIH L+ KS Y F+GSGL+ FY+ C + A+RVFD + E N + W+ ++
Sbjct: 170 KDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLI 229
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
Y Q +A + F +M T+L G+ P+
Sbjct: 230 TCYEQNGPAIEALEAFGRM--------TEL--GFK-----------------------PD 256
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGALIEFYCGCEAFDGAMRVY 276
E T SV+ ACA L AF EG +H ++K F D +G AL++ Y C
Sbjct: 257 EVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKC---------- 306
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
GR+ +A +F+R+ N++S +M+ GYA V ++
Sbjct: 307 ---------------------GRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARS 345
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F + + I+S WN++I+GY QN +E+AL L+ +++ ++
Sbjct: 346 MFATIKQKDIVS-----------------WNALIAGYTQNGENEEALGLFRMLKRESVCP 388
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF------ESNVYVGTSLVDMYSRCGSIN 450
T TF L +A + L L+ G+ H+H+VK F E +++VG SL+DMY +CGS+
Sbjct: 389 THYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVE 448
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
+ F ++ + +W ++ GY+ +G G EA+ LF+ MLE P+ T +G L AC
Sbjct: 449 EGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACS 508
Query: 511 RAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
AGLV EG + F SM K +G++P +HYTC+VDLLGR+G L EA++ I+ MP + DAVVW
Sbjct: 509 HAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVW 568
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
+LLSAC N+ +G+ A+K+F +D YV+L+N+Y+ LG+WG + +RK +
Sbjct: 569 SSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRR 628
Query: 630 EVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
V K PGCSWI++ S VH F V+D+ +P IY+ L+ LT ++
Sbjct: 629 GVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHM 672
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 152/343 (44%), Gaps = 49/343 (14%)
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
F ++ C +L + + + VHG LI+ F + I LI+ Y C D A +V+DR+
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
+ + NS+I+ L+ G ++++ +F+ + E + S+NSMI G+A + + +++ F +
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
M HR LN +
Sbjct: 147 M-HRDDFVLNDY-----------------------------------------------S 158
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
F ACS L L+ G +H + K+ + +V++G+ L+D YS+CG + A+ F +
Sbjct: 159 FGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGME 218
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
NV +W L+ Y +G EA+ F M E P+ T V+SAC EG++
Sbjct: 219 EKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQ 278
Query: 521 IF-RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
I R +KS L +VD+ + G ++EA MP+
Sbjct: 279 IHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPV 321
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
S F+ L C L S + + +H L++TPF V++ L+D+Y +CG ++ A+ F
Sbjct: 25 SPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDR 84
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+S NV ++ ++++ G E+ LF +M E+D
Sbjct: 85 MSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKD 120
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 238/710 (33%), Positives = 359/710 (50%), Gaps = 120/710 (16%)
Query: 6 TQSQTLMTQETL-IVSTNKAITECGRNGQLVTARNLFDQMPIRTVV-------------- 50
++ LMTQ ++ I N+ I G+ L AR LFD+MP R
Sbjct: 37 VHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGF 96
Query: 51 -----------------SWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
SWN+M+ G+++ +F+ESL MHR + LNE +F + LS
Sbjct: 97 LDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSA 156
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
CA L L G Q+H LV KS Y ++GS L+ Y+ C + A+ VF + E N + W
Sbjct: 157 CAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTW 216
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++ Y Q S+A +VF++M + SG
Sbjct: 217 NSLITCYEQNGPASEALEVFVRM----------MDSGLE--------------------- 245
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGALIEFYCGCEAFDGA 272
P+E T SV+ ACA L A EG +H ++K F D +G AL++ Y C + A
Sbjct: 246 --PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEA 303
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD 332
RV+DR+ + + S+++G ++ A +F+++T+ N +S+N++I GY G+ +
Sbjct: 304 RRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENE 363
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
++ RLF + SI W
Sbjct: 364 EALRLFRLLKRESI-------------------WP------------------------- 379
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF------ESNVYVGTSLVDMYSRC 446
T TF L AC+ L L G+ H H++K F ES+++VG SL+DMY +C
Sbjct: 380 ----THYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKC 435
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
GSI D F + + +W A++ GY+ +G G+EA+ +F ML P+ T +GVL
Sbjct: 436 GSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVL 495
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
AC AGLV EG F SM+ +G++P +HYTC+VDLLGR+G L+EA+ I+ MP+ DA
Sbjct: 496 CACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDA 555
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
VVWG+LL+AC N+E+G+ AA+K+ +D YV+LSN+YA LG+WG + +RK +
Sbjct: 556 VVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLM 615
Query: 627 THLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
V K PGCSWIE+ SRVH F V+D+++P+ IY+ L+ LT + V
Sbjct: 616 RQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRV 665
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 204/444 (45%), Gaps = 73/444 (16%)
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
+PN F ++ +C R + ++VH ++ F + I LI+ Y C+ D A +
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
++DR+ NSLI+ L G +++A +F + E + S+NSM+ G+A + + ++S
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 335 KRLFEKMPHRSIISLNT------------------------------------MISVIPE 358
F KM HR LN M S + +
Sbjct: 132 LEYFVKM-HREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALID 190
Query: 359 M------------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
M ERN VTWNS+I+ Y QN +AL++++ M ++ T
Sbjct: 191 MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVT 250
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+ + AC+ L +L++G +HA +VKT F ++ +G +LVDMY++C +N+A+ F +
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
S NV + T++++GY+ A +F M ++++V A G + G E +
Sbjct: 311 SIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGY----TQNGENEEAL 366
Query: 520 KIFRSMKSYGVVPTLEHYT-------C--VVD-LLGRSGHLHEAEE-FIKDMPIELDAVV 568
++FR +K + PT HYT C + D LLGR H H ++ F E D V
Sbjct: 367 RLFRLLKRESIWPT--HYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFV 424
Query: 569 WGALLSACWFWMNMEVGERAAQKM 592
+L+ ++E G R +KM
Sbjct: 425 GNSLIDMYMKCGSIEDGSRVFEKM 448
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 230/681 (33%), Positives = 366/681 (53%), Gaps = 58/681 (8%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
++ ET + N +T R G L+ A +F +M R +S+N+++ G ++ D +L L
Sbjct: 244 LSSETFVC--NALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQL 301
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M +K + T +++LS CA + + GKQ+H V+K G + LL Y
Sbjct: 302 FEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVK 361
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
CF+IE A F +N +LW++MLV Y Q +S+++ +F++M
Sbjct: 362 CFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQM--------------- 406
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
++G MPN+YT+ S++R C LGA G+ +H +IK GF+F
Sbjct: 407 --QIEGL----------------MPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQF 448
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF---- 307
+ + LI+ Y D A + RL + + ++I G +A +F
Sbjct: 449 NVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEME 508
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM---PHRSIISL-NTMISVIPEMER-- 361
N+ +++I ++S I A ++ +++ + + +S+ N ++S+ R
Sbjct: 509 NQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQ 568
Query: 362 ------------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
+ ++WN++ISG+ Q+ E+ALQ++ M + ++ TF A +
Sbjct: 569 DAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATA 628
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+++QG+ +HA ++KT ++S L+ +YS+CGSI DA+ F + NV +W A
Sbjct: 629 NTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNA 688
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSY 528
++ GYS HG GSEAV LFE M + ++PN TFVGVLSAC GLVNEG+ FRSM K +
Sbjct: 689 MITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEH 748
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+VP EHY CVVDLLGR+ L A EFI++MPIE DA++W LLSAC N+E+GE A
Sbjct: 749 GLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFA 808
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A+ + L+ + + YV+LSN+YAV GKW + R+ + VKK+PG SWIE+ + +HA
Sbjct: 809 ARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHA 868
Query: 649 FSVEDRNNPNCNVIYATLEHL 669
F V DR +P IY ++ L
Sbjct: 869 FFVGDRLHPLAEQIYEYIDDL 889
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 143/577 (24%), Positives = 265/577 (45%), Gaps = 58/577 (10%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I +NG + A+ +F+++ ++ VSW M+ G S+ + DE++ L MH+S V
Sbjct: 151 NPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI 210
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
FS++LS C ++ G+Q+H ++K G FV + L+ Y+ + A+++
Sbjct: 211 PTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQI 270
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F ++H + + ++ ++ G Q A +F KM C K
Sbjct: 271 FSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLD------------------CMK- 311
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
P+ T S++ ACA +GA +GK +H +IK G D I G+L++
Sbjct: 312 --------------PDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLD 357
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSIS 317
Y C + A + E + N ++ +G + ++ IF ++ N +
Sbjct: 358 LYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYT 417
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-SVIPEM----------------- 359
Y S+++ G +D +++ ++ +S N + SV+ +M
Sbjct: 418 YPSILRTCTSLGALDLGEQIHTQVI-KSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL 476
Query: 360 -ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
E + V+W +MI+GY Q++L +AL+L+ M I FS AC+ + +L QGQ
Sbjct: 477 REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQ 536
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+HA + + ++ +G +LV +Y+RCG DA +F I + + +W AL++G++ G
Sbjct: 537 QIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSG 596
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
EA+ +F M + + N TF +SA + +G +I M G E
Sbjct: 597 HCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASN 656
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ L + G + +A+ +MP E + V W A+++
Sbjct: 657 VLITLYSKCGSIEDAKREFFEMP-EKNVVSWNAMITG 692
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/573 (24%), Positives = 247/573 (43%), Gaps = 67/573 (11%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
+G++ A LFD +P V WN ++ G + L L S M NV +E+TF+++
Sbjct: 58 HGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASV 117
Query: 91 LSVCAQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
L C+ + +QIH ++ G+ V + L+ Y+ ++ AK VF+ L +
Sbjct: 118 LRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKD 177
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W M+ G Q +A +F +M K V+
Sbjct: 178 SVSWVAMISGLSQNGREDEAILLFCQMHKSAVI--------------------------- 210
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P Y F SV+ AC ++ F G+ +HG ++K G + + AL+ Y
Sbjct: 211 ------PTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNL 264
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGY 325
A +++ ++ + NSLI+GL G + A +F ++ + + ++ S++
Sbjct: 265 IAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSAC 324
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME-----------------------RN 362
A G K+L H +I + +I E N
Sbjct: 325 ASVGAGYKGKQL-----HSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETEN 379
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
V WN M+ Y Q ++ +++ M+ + + T+ + C+ LG+L G+ +H
Sbjct: 380 VVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHT 439
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
++K+ F+ NVYV + L+DMY++ G ++ A+ + +V +WTA++ GY+ H L +E
Sbjct: 440 QVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAE 499
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
A+ LF+ M Q I + F +SAC +N+G +I G L +V
Sbjct: 500 ALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVS 559
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
L R G +A + + + D + W AL+S
Sbjct: 560 LYARCGRAQDAYLAFEKIDAK-DNISWNALISG 591
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/543 (24%), Positives = 240/543 (44%), Gaps = 95/543 (17%)
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++ N T+ + C SL+D K++H + KSG++ + +GS L+ Y E
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG-YAK 193
++ A ++FD++ P +V W K+ISG AK
Sbjct: 61 VDNAIKLFDDI-------------------------------PSSNVSFWNKVISGLLAK 89
Query: 194 SVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGA-FCEGKVVHGLLIKCGFEF 251
+ + L LF M EN+ P+E TF SV+RAC+ A F + +H +I GF
Sbjct: 90 KL--ASQVLGLFSLMIT--ENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGS 145
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
+ LI+ Y D A V++RL + ++I+GL GR ++A L+F ++
Sbjct: 146 SPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMH 205
Query: 312 EANSISY---------------------------------------NSMIKGYAVYGQVD 332
++ I N+++ Y+ +G +
Sbjct: 206 KSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLI 265
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
++++F KM HR R+ +++NS+ISG Q ++ALQL+ M+
Sbjct: 266 AAEQIFSKM-HR----------------RDRISYNSLISGLAQRGFSDRALQLFEKMQLD 308
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ T + L AC+ +G+ +G+ LH++++K S++ + SL+D+Y +C I A
Sbjct: 309 CMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETA 368
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
F + + NV W ++ Y G SE+ +F M + ++PN T+ +L C
Sbjct: 369 HEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSL 428
Query: 513 GLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
G ++ G +I + G + + ++D+ + G L A ++ + E D V W A+
Sbjct: 429 GALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAM 487
Query: 573 LSA 575
++
Sbjct: 488 IAG 490
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 177/418 (42%), Gaps = 68/418 (16%)
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
N T+ + C G+ + K +H + K GF+ ++ +G LI+ Y D A++++
Sbjct: 9 NVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLF 68
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN---------------------- 314
D + + ++ N +I+GL++ +F+ + N
Sbjct: 69 DDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPF 128
Query: 315 ------------------SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+ N +I Y+ G VD +K +FE++
Sbjct: 129 QVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERL--------------- 173
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
++ V+W +MISG QN ++A+ L+ M K A+ T FS + AC+ + +
Sbjct: 174 --FLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKL 231
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ LH +VK S +V +LV +YSR G++ A+ FS + + ++ +L++G +
Sbjct: 232 GEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQ 291
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
G A+ LFE M + P+ T +LSAC G +G ++ + G+ L
Sbjct: 292 RGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLII 351
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA----------CWFWMNMEV 584
++DL + + A E+ E + V+W +L A W ++ M++
Sbjct: 352 EGSLLDLYVKCFDIETAHEYFLTTETE-NVVLWNVMLVAYGQLGNLSESYWIFLQMQI 408
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 226/656 (34%), Positives = 354/656 (53%), Gaps = 89/656 (13%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N ++ C R G+ A LF +P S+N ++ ++ + ++L ++ MH +
Sbjct: 83 SYNALLSACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADD 142
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
LN +F++ LS CA + G+Q+H LV KS + ++G+ L+ YA C EEA+
Sbjct: 143 FVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQ 202
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+V F MP++++V W LI+ Y ++ +
Sbjct: 203 KV-------------------------------FDAMPERNIVSWNSLITCYEQN-GPVD 230
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGA 258
+AL LF M + G +P+E T SV+ ACA L A EG+ VH ++K F D + A
Sbjct: 231 EALALFVRMMKDG-FVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNA 289
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
L++ Y C GR +A+ +F+R+ + +S
Sbjct: 290 LVDMYAKC-------------------------------GRTWEAKCVFDRMAIRSVVSE 318
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
SMI GYA V D++ +F +M +E+N V WN +I+ Y N+
Sbjct: 319 TSMITGYAKSANVGDAQAVFLQM-----------------VEKNVVAWNVLIATYAHNSE 361
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF------ESN 432
E+AL+L++ +++ ++ T T+ + +AC+ L +LQ GQ H H++K F ES+
Sbjct: 362 EEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESD 421
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V+VG SLVDMY + GSI+D F +++ + +W A++ GY+ +G +A+LLFE ML
Sbjct: 422 VFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLC 481
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
+ P++ T +GVLSAC +GLV EG + F+SM + +G++PT +HYTC++DLLGR+GHL
Sbjct: 482 SNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLK 541
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
E EE I++MP+E DAV+W +LL AC N+++GE AA K+F LD YV+LSN+YA
Sbjct: 542 EVEELIENMPMEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYA 601
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
LGKW +R+ + H V K PGCSWIE+ +V+ F D +P N I+ TL
Sbjct: 602 ELGKWADVFRVRRSMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTLR 657
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 15/260 (5%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER--------------NPV 364
N+++ YA G + D++R+F+ MPHR+ S N ++S + R +
Sbjct: 54 NTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQC 113
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
++N++++ Q+ AL+ M +F+ AC+ + + G+ +HA +
Sbjct: 114 SYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALV 173
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
K+ S+VY+GT+LVDMY++C +AQ F ++ N+ +W +L+ Y +G EA+
Sbjct: 174 TKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEAL 233
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF-RSMKSYGVVPTLEHYTCVVDL 543
LF M++ VP+ T V+SAC EG ++ R +KS + +VD+
Sbjct: 234 ALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDM 293
Query: 544 LGRSGHLHEAEEFIKDMPIE 563
+ G EA+ M I
Sbjct: 294 YAKCGRTWEAKCVFDRMAIR 313
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 168/406 (41%), Gaps = 92/406 (22%)
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
L+ Y + A RV+D + + + N+L++ +GR +DA +F + + + SY
Sbjct: 56 LLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQCSY 115
Query: 319 NSMIKGYAVYGQVDDSKR--------------------------------------LFEK 340
N+++ A +G+ D+ R L K
Sbjct: 116 NAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTK 175
Query: 341 MPHRSIISLNTMISVI------PE---------MERNPVTWNSMISGYVQNNLHEKALQL 385
H S + + T + + PE ERN V+WNS+I+ Y QN ++AL L
Sbjct: 176 SSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALAL 235
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP-FESNVYVGTSLVDMYS 444
++ M K T + + AC+ L + ++G+ +H +VK+ F ++ + +LVDMY+
Sbjct: 236 FVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYA 295
Query: 445 RCG-------------------------------SINDAQASFSSISSPNVAAWTALMNG 473
+CG ++ DAQA F + NV AW L+
Sbjct: 296 KCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIAT 355
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK----IFRSMKSYG 529
Y+H+ EA+ LF + + + P T+ VL+AC + G + + + +
Sbjct: 356 YAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFD 415
Query: 530 VVPTLEHY--TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
P + + +VD+ ++G + + + + M D V W A++
Sbjct: 416 SGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAAR-DNVSWNAMI 460
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 164/396 (41%), Gaps = 59/396 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS IT ++ + A+ +F QM + VV+WN ++ Y+ ++ +E+L L + R
Sbjct: 315 VVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKR 374
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY------ECFEFVGSGLLFFYAN 131
+V T+ +L+ CA L +L G+Q H VLK G+ E FVG+ L+ Y
Sbjct: 375 ESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLK 434
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKL 187
I + +VF+ + + + W+ M+VGY Q DA +F +M + D V +
Sbjct: 435 TGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGV 494
Query: 188 ISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
+S S ++ + F+ M E +P + +I R G K V L+
Sbjct: 495 LSACGHS-GLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHL---KEVEELIENM 550
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
E D + +L+ GA R++ I MG +L
Sbjct: 551 PMEPDAVLWASLL----------GACRLHKN----------------IDMGEWAAGKLF- 583
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI--------ISLNTMISVIPEM 359
L NS Y + YA G+ D R+ M HR + I + ++V +
Sbjct: 584 -ELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIEIGRKVNVF--L 640
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
R+ + +N +H+ + M M +++ID
Sbjct: 641 ARDNIH-------PCRNEIHDTLRIIQMQMSRMSID 669
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 36/181 (19%)
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQ-------------------------------AS 455
+PF ++ +L+ Y+R GS++DA+ A
Sbjct: 44 SPFAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALAL 103
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV--RAG 513
F +I P+ ++ A++ + HG G +A+ M D V NA +F LSAC +A
Sbjct: 104 FGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKAS 163
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
E + + S+G + T +VD+ + EA++ MP E + V W +L+
Sbjct: 164 RTGEQVHALVTKSSHGSDVYIG--TALVDMYAKCERPEEAQKVFDAMP-ERNIVSWNSLI 220
Query: 574 S 574
+
Sbjct: 221 T 221
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/668 (33%), Positives = 338/668 (50%), Gaps = 85/668 (12%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M ET + IT + G++ A +F +M R VVSW ++ ++ K +E+ L
Sbjct: 186 MGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFEL 245
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M ++ + N TF ++L+ C +L G++IH + + G E V + L+ Y
Sbjct: 246 YEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYC- 304
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+CN + +A ++F +M K+DV+ W+ +I+GY
Sbjct: 305 ------------------------------KCNSVQEAREIFDRMSKRDVISWSAMIAGY 334
Query: 192 AKS----VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
A+S + ++ +L MR G PN+ TF S++RAC GA +G+ +H L K
Sbjct: 335 AQSGYKDKESIDEVFQLLERMRREGV-FPNKVTFMSILRACTAHGALEQGRQIHAELSKV 393
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
GFE D S+ A+ Y C G I +AE +F
Sbjct: 394 GFELDRSLQTAIFNMYAKC-------------------------------GSIYEAEQVF 422
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
+++ N +++ S + Y G + ++++F +MP RN V+WN
Sbjct: 423 SKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMP-----------------TRNVVSWN 465
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
MI+GY QN K +L +M+ R T + AC L L++G+L+HA VK
Sbjct: 466 LMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKL 525
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
ES+ V TSL+ MYS+CG + +A+ F +S+ + AW A++ GY HG G EAV LF
Sbjct: 526 GLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLF 585
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGR 546
+ ML++ + PN T V+SAC RAGLV EG +IFR M+ + + P +HY C+VDLLGR
Sbjct: 586 KRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGR 645
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G L EAEEFI+ MP E D VW ALL AC N+++ ERAA + L+ S Y+ L
Sbjct: 646 AGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITL 705
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SNIYA G+W +R+ + +KKD G S IE++ R+H F ED +P + I+A L
Sbjct: 706 SNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAEL 765
Query: 667 EHLTANLN 674
E LT +
Sbjct: 766 ETLTKEMK 773
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 127/573 (22%), Positives = 250/573 (43%), Gaps = 92/573 (16%)
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
K + E++ L+ + + + +N T+ ++ CA+ DGK +H + + G E +
Sbjct: 33 KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
+G+ L+ FY+ ++ A++VF +M +D
Sbjct: 93 LGNSLINFYSKFEDVASAEQVFR-------------------------------RMTLRD 121
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
VV W+ +I+ YA + + KA F M ++ PN TF S+++AC +G+ +
Sbjct: 122 VVTWSSMIAAYAGN-NHPAKAFDTFERMTDANIE-PNRITFLSILKACNNYSILEKGRKI 179
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
H ++ G E D ++ ALI Y C A V+ ++ + + ++I ++
Sbjct: 180 HTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKL 239
Query: 301 EDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI----ISLNTM 352
+A ++ ++ +A N++++ S++ ++ +R+ + R + I N +
Sbjct: 240 NEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANAL 299
Query: 353 IS-------------VIPEM-ERNPVTWNSMISGYVQNNLHEK-----ALQLYMTMRKLA 393
I+ + M +R+ ++W++MI+GY Q+ +K QL MR+
Sbjct: 300 ITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREG 359
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+ + TF + AC+ G+L+QG+ +HA L K FE + + T++ +MY++CGSI +A+
Sbjct: 360 VFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAE 419
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV----------------- 496
FS +++ NV AWT+ ++ Y G S A +F M +++V
Sbjct: 420 QVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVK 479
Query: 497 --------------PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
P+ T + +L AC + G + G+ T ++
Sbjct: 480 VFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIG 539
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + G + EA M D V W A+L+
Sbjct: 540 MYSKCGQVAEARTVFDKMS-NRDTVAWNAMLAG 571
>gi|255575746|ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531775|gb|EEF33594.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 234/645 (36%), Positives = 358/645 (55%), Gaps = 38/645 (5%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N ++ + G+L A LF++MP R VVSW +MLCG + K E+ SL M
Sbjct: 42 VSYNALLSGLLQCGRLSEAMKLFEEMPERNVVSWTSMLCGLADAGKICEAKSLFEEMPDR 101
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS--GLLFFYANCFEIE 136
NV +S A + LI + + + S G++ YA +E
Sbjct: 102 NV----------VSWNAMIVGLIRNGDLEAARMVFDESPVKNAASWNGMIAGYAENGRME 151
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
EA+ +FDE+ + N + W+ M+ GY + + + + +F MPK+++V WT +I G+ + +
Sbjct: 152 EARALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFRTMPKRNIVSWTAMIGGF--TWN 209
Query: 197 GC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE---FD 252
G E AL LF M+ + PN TF S+ ACA LG GK +H LI G + +D
Sbjct: 210 GFYEDALLLFLEMKRGADITPNIETFISLAYACAGLGFHRLGKQLHARLITEGLDNDDYD 269
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENP-CLNASNSLINGLISMGRIEDAELIFNRLT 311
+ LI Y D A ++++ N + + N +ING I +G ++ A+ +F+ +
Sbjct: 270 GRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNYMINGYIRIGLLDKAQNLFDTMP 329
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
+ I++ SMI GY V G V ++ LF MP E++ V W +MIS
Sbjct: 330 VRDKITWTSMIDGYLVIGNVSEACSLFLYMP-----------------EKDAVAWTTMIS 372
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
G+V+N L +A L+ M + ST+++LF A + SL QG+ LHA L KT ++
Sbjct: 373 GHVRNELFAEATYLFSEMLTQGVRPLSSTYAILFGAAGAVASLDQGRQLHAMLTKTLSDN 432
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
++ + SL+ MY++CG I +A FS + S ++ +W +++ G+SHHGL +EA+ +FE M+
Sbjct: 433 DLILENSLISMYAKCGEIRNAYRIFSQMISHDLISWNSMIMGFSHHGLANEALEVFEAMV 492
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHL 550
+ PN+ TF+GVLSAC AGL+N+G +IF +M + V P LEHY C+V+LLGR+G L
Sbjct: 493 DSGTHPNSVTFLGVLSACSHAGLINQGWEIFNAMSDVFAVQPGLEHYICMVNLLGRAGKL 552
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWF-WMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
EAEE I +P+E + +WGALL C F N ++ +RAA ++ LD A+V+L NI
Sbjct: 553 KEAEELILGLPLERNHAIWGALLGVCSFSEKNADIAKRAATRILELDPLNAPAHVLLCNI 612
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
YA G+ ++ +RK + VKK PGCSWI LN RVH F D+
Sbjct: 613 YAASGQHIEEHKLRKEMGLKGVKKVPGCSWIVLNGRVHVFLSGDK 657
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 204/472 (43%), Gaps = 102/472 (21%)
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ LL Y+ ++EA+ +FD + E N + ++ +L G +QC +S+A +F +MP+++VV
Sbjct: 14 TSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFEEMPERNVV 73
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
WT ++ G A + CE A LF E MP+ R A G + +G
Sbjct: 74 SWTSMLCGLADAGKICE-AKSLF-------EEMPD--------RNVVSWNAMIVGLIRNG 117
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRI 300
L FDES P NA+ N +I G GR+
Sbjct: 118 DLEAARMVFDES---------------------------PVKNAASWNGMIAGYAENGRM 150
Query: 301 EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
E+A +F+ + + N I++ SM+ GY G+V++ LF MP R+I+S
Sbjct: 151 EEARALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFRTMPKRNIVS------------ 198
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACSCLGSLQQGQL 419
W +MI G+ N +E AL L++ M++ A I TF L +AC+ LG + G+
Sbjct: 199 -----WTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYACAGLGFHRLGKQ 253
Query: 420 LHAHLVKTPFESNVYVG---TSLVDMYS-------------------------------- 444
LHA L+ +++ Y G L+ MYS
Sbjct: 254 LHARLITEGLDNDDYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNYMINGYI 313
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
R G ++ AQ F ++ + WT++++GY G SEA LF M E+D A +
Sbjct: 314 RIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVSEACSLFLYMPEKD----AVAWTT 369
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
++S VR L E +F M + GV P Y + G L + +
Sbjct: 370 MISGHVRNELFAEATYLFSEMLTQGVRPLSSTYAILFGAAGAVASLDQGRQL 421
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 101/252 (40%), Gaps = 64/252 (25%)
Query: 17 LIVSTNKAITECGRNGQLVTARNLFDQMPIR----------------------------- 47
++ S N I R G L A+NLFD MP+R
Sbjct: 301 VVQSCNYMINGYIRIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVSEACSLFLYMP 360
Query: 48 --TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQ 105
V+W TM+ G+ + F E+ L S M V+ +T++ + + SL G+Q
Sbjct: 361 EKDAVAWTTMISGHVRNELFAEATYLFSEMLTQGVRPLSSTYAILFGAAGAVASLDQGRQ 420
Query: 106 IHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNL 165
+H ++ K+ + + + L+ YA C EI A R+F ++ + + W+ M++G+ L
Sbjct: 421 LHAMLTKTLSDNDLILENSLISMYAKCGEIRNAYRIFSQMISHDLISWNSMIMGFSHHGL 480
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
++A +V F M +SG + PN TF V+
Sbjct: 481 ANEALEV--------------------------------FEAMVDSGTH-PNSVTFLGVL 507
Query: 226 RACARLGAFCEG 237
AC+ G +G
Sbjct: 508 SACSHAGLINQG 519
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
++P VY TSL+ YSR G +++A+A F + N ++ AL++G G SEA+
Sbjct: 4 RSPLSRIVYW-TSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMK 62
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
LFE M E+++V ++ +L AG + E +F M VV + ++ L
Sbjct: 63 LFEEMPERNVV----SWTSMLCGLADAGKICEAKSLFEEMPDRNVVS----WNAMIVGLI 114
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
R+G L A + P++ +A W +++
Sbjct: 115 RNGDLEAARMVFDESPVK-NAASWNGMIAG 143
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+L+A ++TL + ++ N I+ + G++ A +F QM ++SWN+M+ G+S
Sbjct: 420 QLHAMLTKTLSDNDLIL--ENSLISMYAKCGEIRNAYRIFSQMISHDLISWNSMIMGFSH 477
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF 118
+E+L + M S N TF +LS C+ H ++ G+E F
Sbjct: 478 HGLANEALEVFEAMVDSGTHPNSVTFLGVLSACS-----------HAGLINQGWEIF 523
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/663 (33%), Positives = 353/663 (53%), Gaps = 87/663 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ + N +T + G L A +LF MP R +WN+M+ G+++ + +E+L + MH+
Sbjct: 86 VFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHK 145
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
LNE TF++ LS C+ LN + G QIH L+ KS ++GS L+ Y+ C + +
Sbjct: 146 EGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVND 205
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++VFDE+ + N VV W LI+ Y ++
Sbjct: 206 AQQVFDEMGDRN-------------------------------VVSWNSLITCYEQNGPA 234
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E ALK+F+ M ES P+E T SVI ACA L A G+ VH ++K
Sbjct: 235 VE-ALKVFQVMLESWVE-PDEVTLASVISACASLSAIKVGQEVHARVVK----------- 281
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
D+L N + SN+ ++ RI++A IF+ + N I+
Sbjct: 282 ------------------MDKLRNDII-LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
SM+ GYA+ ++ +F KM R+++S WN++I+GY QN
Sbjct: 323 ETSMVSGYAMAASTKAARLMFTKMAERNVVS-----------------WNALIAGYTQNG 365
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF------ES 431
+E+AL L+ +++ ++ T TF+ + AC+ L L G H H++K F E
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEED 425
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+++VG SL+DMY +CG + + F + + +W A++ G++ +G G+EA+ LF ML
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML 485
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHL 550
+ P+ T +GVLSAC AG V EG F SM + +GV P +HYTC+VDLLGR+G L
Sbjct: 486 DSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFL 545
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
EA+ I++MP++ D+V+WG+LL+AC N+ +G+ A+K+F ++ YV+LSN+Y
Sbjct: 546 EEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMY 605
Query: 611 AVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
A LGKWG M++RK + V K PGCSWI++ H F V+D+++P I++ L+ L
Sbjct: 606 AELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILI 665
Query: 671 ANL 673
A +
Sbjct: 666 AEM 668
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/689 (32%), Positives = 371/689 (53%), Gaps = 83/689 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES--------- 68
+V +N I+ + G LV AR LFD+MP R VSW+ ++ G K+ + +ES
Sbjct: 87 LVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPF 146
Query: 69 ----------------------LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
L L + S V+ N+ TF++++ C +L G I
Sbjct: 147 QNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSI 206
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
LV+K+G+E + V + L+ EI+ A+RVFD + + + + W+ +L YV+ +
Sbjct: 207 LGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDL 266
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
+A +F +MP+++ + W+ +I+ Y++S E+ALKLF M + G PN F +
Sbjct: 267 REARRIFDEMPERNEISWSAMIARYSQS-GYAEEALKLFSKMVQEGFK-PNISCFACTLS 324
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
A A L A G +HG + K G + D IG +LI+ YC C
Sbjct: 325 ALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKC-------------------- 364
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
G+ +D L+F+ + E N + +NSM+ GY++ G++++++ LFE +P
Sbjct: 365 -----------GKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIP---- 409
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
E+N V+W ++I+GY++N EK L+++ T+ +STFS +
Sbjct: 410 -------------EKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLC 456
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
AC+ + SL +G +H ++K + +++VGT+L DMY++CG I ++ F + N +
Sbjct: 457 ACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEIS 516
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLE-QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
WT ++ G + G E+++LFE M ++ PN + VL AC GLV++G+ F SM
Sbjct: 517 WTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSM 576
Query: 526 -KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
K YG+ P +HYTCVVDLL RSG L+EAEEFI+ +P + +A W ALLS C + + ++
Sbjct: 577 EKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKI 636
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
ER A+K++ L + + YV+LSNIYA G+W +IRK + +KK GCSW+E+ +
Sbjct: 637 AERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRN 696
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+VH+F ED ++ N IY TL+ L + +
Sbjct: 697 QVHSFYSEDGSHSQSNEIYGTLQLLRSEM 725
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/537 (24%), Positives = 229/537 (42%), Gaps = 111/537 (20%)
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
+ G +H ++K+G+ ++ LL Y NC + E ++ E + ++ + M+
Sbjct: 37 ITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISA 96
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK------------------------SV 195
YVQ + A +F +MP+++ V W+ LISG K ++
Sbjct: 97 YVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAI 156
Query: 196 DGCEK------ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
G + ALKLF + ESG PN+ TF SV+RAC LG F G + GL++K GF
Sbjct: 157 SGFVRNGLNFEALKLFFRLLESGVR-PNDVTFTSVVRACGELGDFGLGMSILGLVVKAGF 215
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
E S+ +LI D A RV+DR+E + + ++++ + G + +A IF+
Sbjct: 216 EHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDE 275
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ E N IS+++MI Y+ G +++ +LF KM
Sbjct: 276 MPERNEISWSAMIARYSQSGYAEEALKLFSKMVQE------------------------- 310
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
G+ N S F+ A + L +L G +H H+ K
Sbjct: 311 --GFKPN---------------------ISCFACTLSALASLRALSAGINIHGHVTKIGI 347
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS-------- 481
+ +V++G+SL+D+Y +CG +D + F I NV W +++ GYS +G
Sbjct: 348 DKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFEL 407
Query: 482 ----------------------EAVL-LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
E VL +F +L PN +TF VL AC +++G
Sbjct: 408 IPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKG 467
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
M + + G+ + T + D+ + G + +++ + MP E + + W ++
Sbjct: 468 MNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMP-EKNEISWTVMIQG 523
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 156/323 (48%), Gaps = 21/323 (6%)
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
S+++ + G +G V+H LIK GF I L+ Y C F ++ +
Sbjct: 26 SLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGS 85
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
L SN +I+ + G + A L+F+ + E N +S++++I G YG+V++S FE+ P
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
++++S W + ISG+V+N L+ +AL+L+ + + + TF+
Sbjct: 146 FQNVVS-----------------WTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFT 188
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ AC LG G + +VK FE + V SL+ + R G I+ A+ F +
Sbjct: 189 SVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKR 248
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
+V +WTA+++ Y G EA +F+ M E+ N ++ +++ ++G E +K+F
Sbjct: 249 DVVSWTAILDAYVETGDLREARRIFDEMPER----NEISWSAMIARYSQSGYAEEALKLF 304
Query: 523 RSMKSYGVVPTLEHYTCVVDLLG 545
M G P + + C + L
Sbjct: 305 SKMVQEGFKPNISCFACTLSALA 327
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 24/230 (10%)
Query: 381 KALQLYMTMRKLA-IDRTRSTFS---VLFHACSCLGSLQQGQLLHAHLV--KTPFESNVY 434
K L LY+ RK A ID+ F ++ C +Q G L+ A L+ + P E N
Sbjct: 61 KLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMP-ERNEV 119
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
++L+ + G + ++ F NV +WTA ++G+ +GL EA+ LF +LE
Sbjct: 120 SWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESG 179
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHL 550
+ PN TF V+ AC G GM I + G EHY V + L R G +
Sbjct: 180 VRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAG----FEHYLSVSNSLITLSLRMGEI 235
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE-RAAQKMFGLDKKP 599
A M + D V W A+L A +E G+ R A+++F D+ P
Sbjct: 236 DLARRVFDRME-KRDVVSWTAILDAY-----VETGDLREARRIF--DEMP 277
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/698 (32%), Positives = 347/698 (49%), Gaps = 90/698 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ R G L AR LF MP R ++SWN ++ GY++ E++ L M VK
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
TF +LS CA ++ DGK IH +L+SG + + + L+ Y C + EA+
Sbjct: 429 PGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ-- 486
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
+VF +DV+ W +I+G+A+ E A
Sbjct: 487 -----------------------------NVFEGTQARDVISWNSMIAGHAQH-GSYETA 516
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
KLF+ M+ E P+ TF SV+ C A GK +HG + + G + D ++G ALI
Sbjct: 517 YKLFQEMQNE-ELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALIN 575
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR-IEDAEL--------------- 305
Y C + A V+ L++ + + ++I G G ++ EL
Sbjct: 576 MYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKST 635
Query: 306 -----------------------IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
I N E ++ N++I Y+ G + D++ +F+KMP
Sbjct: 636 FSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMP 695
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
R I+S WN +I+GY QN L + A++ M++ + + +F
Sbjct: 696 SRDIVS-----------------WNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFV 738
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
L +ACS +L++G+ +HA +VK + +V VG +L+ MY++CGS +AQ F +I
Sbjct: 739 SLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEK 798
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
NV W A++N Y+ HGL S+A+ F M ++ I P+ +TF +LSAC AGLV EG +IF
Sbjct: 799 NVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIF 858
Query: 523 RSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMN 581
SM+S YGV+PT+EHY C+V LLGR+ EAE I MP DA VW LL AC N
Sbjct: 859 SSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGN 918
Query: 582 MEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
+ + E AA L+ + + Y++LSN+YA G+W IR+ + ++K+PG SWIE
Sbjct: 919 IALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIE 978
Query: 642 LNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSVVLF 679
+++ +H F DR++P IYA L+ L+ + F
Sbjct: 979 VDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYF 1016
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/573 (24%), Positives = 272/573 (47%), Gaps = 56/573 (9%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
+T C R G + +A+ F R VV +N ++ ++ E+ M V LN
Sbjct: 271 VTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNR 330
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
TT+ +IL+ C+ +L GK IH + + G+ +G+ L+ YA C ++ +A+ +F
Sbjct: 331 TTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYT 390
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ + + + W+ ++ +GYA+ D E A++L
Sbjct: 391 MPKRDLISWNAII-------------------------------AGYARREDRGE-AMRL 418
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
++ M+ G P TF ++ ACA A+ +GK++H +++ G + + + AL+ Y
Sbjct: 419 YKQMQSEGVK-PGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYR 477
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNS 320
C + A V++ + + + NS+I G G E A +F + E ++I++ S
Sbjct: 478 RCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFAS 537
Query: 321 MIK----------GYAVYGQVDDSKRLFEKMPHRSII-------SLNTMISVIPEME-RN 362
++ G ++G++ +S + ++I SL +V ++ R+
Sbjct: 538 VLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRD 597
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
++W +MI G KA++L+ M+ +STFS + C+ L +G+ + A
Sbjct: 598 VMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIA 657
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+++ + +E + VG +L+ YS+ GS+ DA+ F + S ++ +W ++ GY+ +GLG
Sbjct: 658 YILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQT 717
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
AV M EQD+VPN +FV +L+AC + EG ++ + + + ++
Sbjct: 718 AVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALIS 777
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + G EA+E ++ IE + V W A+++A
Sbjct: 778 MYAKCGSQGEAQEVFDNI-IEKNVVTWNAMINA 809
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/610 (23%), Positives = 260/610 (42%), Gaps = 101/610 (16%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
++ A +F +MP R V+SWN+++ Y++ ++ L M + N+ T+ +IL+
Sbjct: 78 VLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTA 137
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
C L +GK+IH ++K+GY+ V + LL Y C ++ A++
Sbjct: 138 CYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQ------------- 184
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
VF + +DVV + ++ YA+ ++ L LF M G
Sbjct: 185 ------------------VFAGISPRDVVSYNTMLGLYAQKAY-VKECLGLFGQMSSEGI 225
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
+ P++ T+ +++ A EGK +H L ++ G D +G AL+ C D A
Sbjct: 226 S-PDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAK 284
Query: 274 RVYDRLENPCLNASNSLINGLISMG----------RIEDAELIFNRLT------------ 311
+ + + + N+LI L G R+ + NR T
Sbjct: 285 QAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSK 344
Query: 312 --EANSISY---------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
EA + + N++I YA G + ++ LF MP R +IS
Sbjct: 345 ALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLIS------ 398
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
WN++I+GY + +A++LY M+ + R TF L AC+ +
Sbjct: 399 -----------WNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
G+++H ++++ +SN ++ +L++MY RCGS+ +AQ F + +V +W +++ G+
Sbjct: 448 ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
+ HG A LF+ M +++ P+ TF VLS C + G +I + G+ +
Sbjct: 508 AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV 567
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC-----------WFWMNME 583
++++ R G L +A + D + W A++ C FW
Sbjct: 568 NLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626
Query: 584 VGERAAQKMF 593
G R + F
Sbjct: 627 EGFRPVKSTF 636
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/571 (23%), Positives = 274/571 (47%), Gaps = 55/571 (9%)
Query: 135 IEEAKRVFDELHE----DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
+ EAKR+ ++ E + L +L++ YV+C + DA VF +MP++DV+ W LIS
Sbjct: 43 LPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISC 102
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
YA+ +KA +LF M+ +G +PN+ T+ S++ AC GK +H +IK G++
Sbjct: 103 YAQQ-GFKKKAFQLFEEMQNAG-FIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQ 160
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
D + +L+ Y C A +V+ + + + N+++ +++ +F ++
Sbjct: 161 RDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQM 220
Query: 311 TE----ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII--SLNTMISVIPEM----- 359
+ + ++Y +++ + +D+ KR+ H+ + LN+ I V +
Sbjct: 221 SSEGISPDKVTYINLLDAFTTPSMLDEGKRI-----HKLTVEEGLNSDIRVGTALVTMCV 275
Query: 360 ----------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
+R+ V +N++I+ Q+ + +A + Y MR + R+T+
Sbjct: 276 RCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLS 335
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ +ACS +L+ G+L+H+H+ + S+V +G +L+ MY+RCG + A+ F ++ +
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+ +W A++ GY+ EA+ L++ M + + P TF+ +LSAC + +G I
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
+ G+ ++++ R G L EA+ + D + W ++++ + E
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYE 514
Query: 584 VGERAAQKMFGLDKKP--ISAYVILS---NIYAV-LGKWGKKMDIRKRLTHLEVKKDPGC 637
+ Q+M + +P I+ +LS N A+ LGK I R+T ++ D
Sbjct: 515 TAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGK-----QIHGRITESGLQLDVNL 569
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+N + S++D N ++ +L+H
Sbjct: 570 GNALINMYIRCGSLQDARN-----VFHSLQH 595
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 168/378 (44%), Gaps = 23/378 (6%)
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T+ ++++ C R E K +H +++ D + LI Y C + A +V+ +
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSK 335
+ + NSLI+ G + A +F + A N I+Y S++ ++++ K
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 336 RL--------FEKMP--HRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQNN 377
++ +++ P S++S+ +P R+ V++N+M+ Y Q
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
++ L L+ M I + T+ L A + L +G+ +H V+ S++ VGT
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+LV M RCG ++ A+ +F + +V + AL+ + HG EA + M +
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
N T++ +L+AC + + G I + G ++ ++ + R G L +A E
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELF 388
Query: 558 KDMPIELDAVVWGALLSA 575
MP + D + W A+++
Sbjct: 389 YTMP-KRDLISWNAIIAG 405
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 1/186 (0%)
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
T + + R+T+ L C+ L + + +HA +V+ ++++ L++MY +C
Sbjct: 17 THQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCR 76
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
S+ DA F + +V +W +L++ Y+ G +A LFE M +PN T++ +L+
Sbjct: 77 SVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILT 136
Query: 508 ACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
AC + G KI + G ++ + G+ G L A + + D V
Sbjct: 137 ACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPR-DVV 195
Query: 568 VWGALL 573
+ +L
Sbjct: 196 SYNTML 201
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/689 (32%), Positives = 371/689 (53%), Gaps = 83/689 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES--------- 68
+V +N I+ + G LV AR LFD+MP R VSW+ ++ G K+ + +ES
Sbjct: 87 LVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPF 146
Query: 69 ----------------------LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
L L + S V+ N+ TF++++ C +L G I
Sbjct: 147 QNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSI 206
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
LV+K+G+E + V + L+ EI+ A+RVFD + + + + W+ +L YV+ +
Sbjct: 207 LGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDL 266
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
+A +F +MP+++ + W+ +I+ Y++S E+ALKLF M + G PN F +
Sbjct: 267 REARRIFDEMPERNEISWSAMIARYSQS-GYAEEALKLFSKMVQEGFK-PNISCFACTLS 324
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
A A L A G +HG + K G + D IG +LI+ YC C
Sbjct: 325 ALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKC-------------------- 364
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
G+ +D L+F+ + E N + +NSM+ GY++ G++++++ LFE +P
Sbjct: 365 -----------GKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIP---- 409
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
E+N V+W ++I+GY++N EK L+++ T+ +STFS +
Sbjct: 410 -------------EKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLC 456
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
AC+ + SL +G +H ++K + +++VGT+L DMY++CG I ++ F + N +
Sbjct: 457 ACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEIS 516
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLE-QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
WT ++ G + G E+++LFE M ++ PN + VL AC GLV++G+ F SM
Sbjct: 517 WTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSM 576
Query: 526 -KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
K YG+ P +HYTCVVDLL RSG L+EAEEFI+ +P + +A W ALLS C + + ++
Sbjct: 577 EKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKI 636
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
ER A+K++ L + + YV+LSNIYA G+W +IRK + +KK GCSW+E+ +
Sbjct: 637 AERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRN 696
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+VH+F ED ++ N IY TL+ L + +
Sbjct: 697 QVHSFYSEDGSHSQSNEIYGTLQLLRSEM 725
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 21/323 (6%)
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
S+++ + G +G V+H LIK GF I L+ Y C F ++ +
Sbjct: 26 SLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGS 85
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
L SN +I+ + G + A L+F+ + E N +S++++I G YG+V++S FE+ P
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
+N V+W + ISG+V+N L+ +AL+L+ + + + TF+
Sbjct: 146 F-----------------QNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFT 188
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ AC LG G + +VK FE + V SL+ + R G I+ A+ F +
Sbjct: 189 SVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKR 248
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
+V +WTA+++ Y G EA +F+ M E+ N ++ +++ ++G E +K+F
Sbjct: 249 DVVSWTAILDAYVETGDLREARRIFDEMPER----NEISWSAMIARYSQSGYAEEALKLF 304
Query: 523 RSMKSYGVVPTLEHYTCVVDLLG 545
M G P + + C + L
Sbjct: 305 SKMVQEGFKPNISCFACTLSALA 327
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 166/392 (42%), Gaps = 63/392 (16%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +V N + NG+L LF+ +P + VSW T++ GY + + ++ L + +T
Sbjct: 379 EKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNT 438
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
+ S N++TFS++L CA + SL G +H ++K G + FVG+ L YA C +
Sbjct: 439 LLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGD 498
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I +K+VF+ + E NE+ W++M+ G + SG+A
Sbjct: 499 IGSSKQVFERMPEKNEISWTVMIQGLAE--------------------------SGFAV- 531
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
++L LF M + E PNE SV+ AC+ G V GL E
Sbjct: 532 -----ESLILFEEMERTSEVAPNELMLLSVLFACSHCGL-----VDKGLWYFNSMEKVYG 581
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLE-------NPCLNASNSLINGLISMGRIEDAELIF 307
I + C + + R+Y+ E P NA +L++G + AE
Sbjct: 582 IKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTA 641
Query: 308 NR---LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV 364
+ L E NS Y + YA G+ D + + M + + +
Sbjct: 642 KKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGL------------KKSGGC 689
Query: 365 TW----NSMISGYVQNNLHEKALQLYMTMRKL 392
+W N + S Y ++ H ++ ++Y T++ L
Sbjct: 690 SWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLL 721
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 375 QNNLHEKALQLYMTMRKLA-IDRTRSTFS---VLFHACSCLGSLQQGQLLHAHLV--KTP 428
Q + K L LY+ RK A ID+ F ++ C +Q G L+ A L+ + P
Sbjct: 55 QRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMP 114
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
E N ++L+ + G + ++ F NV +WTA ++G+ +GL EA+ LF
Sbjct: 115 -ERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFF 173
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLL 544
+LE + PN TF V+ AC G GM I + G EHY V + L
Sbjct: 174 RLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAG----FEHYLSVSNSLITLS 229
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE-RAAQKMFGLDKKP 599
R G + A M + D V W A+L A +E G+ R A+++F D+ P
Sbjct: 230 LRMGEIDLARRVFDRME-KRDVVSWTAILDA-----YVETGDLREARRIF--DEMP 277
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/663 (32%), Positives = 350/663 (52%), Gaps = 87/663 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I + N +T + G L A +LF MP R +WN+M+ G+++ + +E+L + MH+
Sbjct: 86 IYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK 145
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
LNE +F+++LS C+ LN + G Q+H L+ KS + ++GS L+ Y+ C + +
Sbjct: 146 EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND 205
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+RVFDE+ + N + W+ ++ + Q +A DVF M + V
Sbjct: 206 AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRV---------------- 249
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
P+E T SVI ACA L A G+ VHG ++K
Sbjct: 250 -----------------EPDEVTLASVISACASLSAIKVGQEVHGRVVK----------- 281
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
D+L N + SN+ ++ RI++A IF+ + N I+
Sbjct: 282 ------------------NDKLRNDII-LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
SMI GYA+ ++ +F KM R+++S WN++I+GY QN
Sbjct: 323 ETSMISGYAMAASTKAARLMFTKMAERNVVS-----------------WNALIAGYTQNG 365
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF------ES 431
+E+AL L+ +++ ++ T +F+ + AC+ L L G H H++K F E
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+++VG SL+DMY +CG + + F + + +W A++ G++ +G G+EA+ LF ML
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML 485
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHL 550
E P+ T +GVLSAC AG V EG F SM + +GV P +HYTC+VDLLGR+G L
Sbjct: 486 ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFL 545
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
EA+ I++MP++ D+V+WG+LL+AC N+ +G+ A+K+ ++ YV+LSN+Y
Sbjct: 546 EEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMY 605
Query: 611 AVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
A LGKW M++RK + V K PGCSWI++ H F V+D+++P I++ L+ L
Sbjct: 606 AELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILI 665
Query: 671 ANL 673
A +
Sbjct: 666 AEM 668
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/689 (32%), Positives = 346/689 (50%), Gaps = 90/689 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ R G L AR LF+ MP R ++SWN ++ GY++ E++ L M VK
Sbjct: 424 NSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVK 483
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
TF +LS C ++ DGK IH +L+SG + + + L+ Y C I EA+
Sbjct: 484 PGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQ-- 541
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
+VF +D++ W +I+G+A+ E A
Sbjct: 542 -----------------------------NVFEGTRARDIISWNSMIAGHAQH-GSYEAA 571
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
KLF M++ G P++ TF SV+ C A G+ +H L+I+ G + D ++G ALI
Sbjct: 572 YKLFLEMKKEGLE-PDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALIN 630
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-EL--------------- 305
Y C + A V+ L + + + ++I G G A EL
Sbjct: 631 MYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKST 690
Query: 306 -----------------------IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
I N E ++ N++I Y+ G + D++++F+KMP
Sbjct: 691 FSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMP 750
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
+R I+S WN MI+GY QN L ALQ M++ + + +F
Sbjct: 751 NRDIMS-----------------WNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFV 793
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ +ACS +L++G+ +HA +VK + +V VG +L+ MY++CGS+ +AQ F + +
Sbjct: 794 SILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEK 853
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
NV W A++N Y+ HGL S+A+ F M ++ I P+ +TF +LSAC +GLV EG +IF
Sbjct: 854 NVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIF 913
Query: 523 RSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMN 581
S++S +G+ PT+EHY C+V LLGR+G EAE I MP DA VW LL AC N
Sbjct: 914 SSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGN 973
Query: 582 MEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
+ + E AA L+ + + YV+LSN+YA G+W IR+ + ++K+PG SWIE
Sbjct: 974 VALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIE 1033
Query: 642 LNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
+++ +H F DR++P IY L+ L+
Sbjct: 1034 VDNIIHEFIAADRSHPETAEIYEELKRLS 1062
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 238/467 (50%), Gaps = 29/467 (6%)
Query: 135 IEEAKRVFDELHE----DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
+ EAKR+ ++ E + L +L++ YV+C +SDA VF+KMP++DV+ W LIS
Sbjct: 98 LAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISC 157
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
YA+ +KA +LF M+ +G +P++ T+ S++ AC GK +H +I+ G++
Sbjct: 158 YAQQ-GFKKKAFQLFEEMQTAG-FIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQ 215
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
D + +L+ Y CE A +V+ + + + N+++ +E+ +F ++
Sbjct: 216 RDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQM 275
Query: 311 TE----ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS-------LNTMISVIPEM 359
+ + ++Y +++ + +D+ KR+ + + + S L TM ++
Sbjct: 276 SSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDV 335
Query: 360 -----------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
+R+ V +N++I+ Q+ +E+A + Y MR + R+T+ + +AC
Sbjct: 336 AGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNAC 395
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
S +L G+L+H+H+ + S+V +G SL+ MY+RCG + A+ F+++ ++ +W
Sbjct: 396 STSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWN 455
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
A++ GY+ EA+ L++ M + + P TF+ +LSAC + ++G I +
Sbjct: 456 AIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS 515
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G+ ++++ R G + EA+ + D + W ++++
Sbjct: 516 GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR-DIISWNSMIAG 561
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 128/569 (22%), Positives = 254/569 (44%), Gaps = 56/569 (9%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ L +AR +F + R VVS+NTML Y++ A +E + L M + ++ T+
Sbjct: 229 GKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYI 288
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L + L +GK+IH L + G VG+ L + C ++ AK+ + +
Sbjct: 289 NLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADR 348
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ ++++ ++ Q +AF+ + +M VV+
Sbjct: 349 DVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVM------------------------- 383
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
N T+ SV+ AC+ A G+++H + + G D IG +LI Y C
Sbjct: 384 --------NRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGD 435
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKG 324
A +++ + L + N++I G +A ++ ++ + +++ ++
Sbjct: 436 LPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSA 495
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTW 366
D K + E + I S + + + M R+ ++W
Sbjct: 496 CTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISW 555
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
NSMI+G+ Q+ +E A +L++ M+K ++ + TF+ + C +L+ G+ +H +++
Sbjct: 556 NSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIE 615
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ + +V +G +L++MY RCGS+ DA F S+ NV +WTA++ G++ G +A L
Sbjct: 616 SGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFEL 675
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
F M P +TF +L AC+ + ++EG K+ + + G ++ +
Sbjct: 676 FWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSK 735
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
SG + +A + MP D + W +++
Sbjct: 736 SGSMTDARKVFDKMP-NRDIMSWNKMIAG 763
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/578 (23%), Positives = 250/578 (43%), Gaps = 90/578 (15%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +F +MP R V+SWN+++ Y++ ++ L M + ++ T+ +IL+ C
Sbjct: 136 AHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCS 195
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L GK+IH ++++GY+ V + LL Y C ++ A++VF ++
Sbjct: 196 PAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIY---------- 245
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
++DVV + ++ YA+ E+ + LF M G P
Sbjct: 246 ---------------------RRDVVSYNTMLGLYAQKAY-VEECIGLFGQMSSEGIP-P 282
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
++ T+ +++ A EGK +H L + G D +G AL + C GA +
Sbjct: 283 DKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQAL 342
Query: 277 DRLENPCLNASNSLINGLISMGRIEDA--------------------------------- 303
+ + + N+LI L G E+A
Sbjct: 343 EAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALG 402
Query: 304 --ELIFNRLTEANSIS----YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
ELI + ++E S NS+I YA G + ++ LF MP R +IS
Sbjct: 403 AGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLIS--------- 453
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
WN++I+GY + +A++LY M+ + R TF L AC+ + G
Sbjct: 454 --------WNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDG 505
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+++H ++++ +SN ++ +L++MY RCGSI +AQ F + ++ +W +++ G++ H
Sbjct: 506 KMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQH 565
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
G A LF M ++ + P+ TF VL C + G +I + G+ +
Sbjct: 566 GSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLG 625
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++++ R G L +A E + + + W A++
Sbjct: 626 NALINMYIRCGSLQDAYEVFHSLR-HRNVMSWTAMIGG 662
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 167/381 (43%), Gaps = 23/381 (6%)
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
N + +++ C R + E K +H +++ G D + LI Y C + A +V+
Sbjct: 81 NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVF 140
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVD 332
++ + + NSLI+ G + A +F + A + I+Y S++ +++
Sbjct: 141 LKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELE 200
Query: 333 DSKRLFEKMP----HRSIISLNTMISVIPEME--------------RNPVTWNSMISGYV 374
K++ K+ R N+++++ + E R+ V++N+M+ Y
Sbjct: 201 YGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYA 260
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
Q E+ + L+ M I + T+ L A + L +G+ +H V S++
Sbjct: 261 QKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIR 320
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
VGT+L M+ RCG + A+ + + + +V + AL+ + HG EA + M
Sbjct: 321 VGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDG 380
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
+V N T++ VL+AC + + G I + G ++ ++ + R G L A
Sbjct: 381 VVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRAR 440
Query: 555 EFIKDMPIELDAVVWGALLSA 575
E MP + D + W A+++
Sbjct: 441 ELFNTMP-KRDLISWNAIIAG 460
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 84/179 (46%), Gaps = 1/179 (0%)
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ R+ + L C+ SL + + +HA +V+ ++++ L++MY +C S++DA
Sbjct: 79 ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F + +V +W +L++ Y+ G +A LFE M +P+ T++ +L+AC
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198
Query: 515 VNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G KI + G ++++ G+ L A + + D V + +L
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGI-YRRDVVSYNTML 256
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/665 (34%), Positives = 350/665 (52%), Gaps = 89/665 (13%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N ++ R G+ AR LF +P S+N ++ ++ ++ ++L ++ MH +
Sbjct: 828 SYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADD 887
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
LN +F++ LS CA G Q+H LV KS + ++GS LL YA C EEA+
Sbjct: 888 FVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEAR 947
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
R VF MP++++V W LI+ Y ++ E
Sbjct: 948 R-------------------------------VFEAMPERNIVSWNSLITCYEQNGPVGE 976
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGA 258
AL LF M ++G +P+E T SV+ ACA L A EG+ VH ++K F D + A
Sbjct: 977 -ALVLFVSMMKAG-FVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNA 1034
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
L++ Y C GR A +F+R+ + +S
Sbjct: 1035 LVDMYAKC-------------------------------GRTRAARCVFDRMASRSVVSE 1063
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
S+I GYA V+D++ +F +M +E+N + WN +I+ Y QN
Sbjct: 1064 TSLITGYARSANVEDAQMVFSQM-----------------VEKNVIAWNVLIAAYAQNGE 1106
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF------ESN 432
E+AL+L++ +++ ++ T T+ + +AC + LQ GQ H H++K F ES+
Sbjct: 1107 EEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESD 1166
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V+VG SLVDMY + GSI+D F +++ + +W A++ G++ +G +A+ LFE ML
Sbjct: 1167 VFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLC 1226
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
P++ T +GVLSAC +GLV EG + FRSM + +G++P+ +HYTC++DLLGR+GHL
Sbjct: 1227 SKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLK 1286
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
E EE IK+M +E DAV+W +LL +C N+E+GE AA K+F LD + YV+LSN+YA
Sbjct: 1287 EVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYA 1346
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
LGKW +R + H V K PGCSWIE+ +V F D +P N I+A L +
Sbjct: 1347 ELGKWADVFRVRSSMKHRGVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIHAILRIIQM 1406
Query: 672 NLNSV 676
++ V
Sbjct: 1407 QMSRV 1411
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 171/643 (26%), Positives = 304/643 (47%), Gaps = 91/643 (14%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N+AI G + AR LFD MP+R SWN ++ S+ E+LSL S M+ ++
Sbjct: 89 NRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIR 148
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T +++LS CA+ L +Q+H + K ++ +G+ L+ Y NCF + +A+R
Sbjct: 149 PKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRA 208
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD++ E N + W++++ Y + A D+F +M V
Sbjct: 209 FDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGV-------------------- 248
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
P YT + AC A EG+ +H +++ G+E + ++++
Sbjct: 249 -------------RPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVD 295
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
Y C A D A +++ + S S+++GL S GRI DA+ +F + E N +S+N+M
Sbjct: 296 MYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAM 355
Query: 322 IKGYA----------VYGQVDDSKRLFEKMPHRSIISLNTMISVIP-------------- 357
+ GY ++ Q+ R F+ + S++S T I I
Sbjct: 356 LTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGF 415
Query: 358 -----------------------------EM--ERNPVTWNSMISGYVQNNLHEKALQLY 386
EM ER+ +WNS+ISGY ++++ E AL
Sbjct: 416 FSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYAL 475
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
M+ + +STFS AC+ + L+QG +HA++++ +E + + + L+DMY +C
Sbjct: 476 TKMQS-EVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKC 534
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
+ + F + S +V W +++ G ++ G G + LF+ M +Q I ++ TF+G L
Sbjct: 535 RQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGAL 594
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
+C+ G V G F M ++P +EHY C+++LLG+ G + E E+F++ MP E
Sbjct: 595 VSCISEGHVRLGRSYFTLMMDESIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTT 654
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
+W + C + N ++GERAA+ + D P++ ++ +
Sbjct: 655 AMWLRIFDCCREYGNRKLGERAAKCIN--DSNPLTPVQFVATV 695
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 154/673 (22%), Positives = 273/673 (40%), Gaps = 116/673 (17%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
+F+ P R V+ WN+M+ G + K + L L M + +K + TF L C
Sbjct: 543 IFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGH 602
Query: 100 LIDGKQIHCLVLKSG-------YEC-FEFVGS-GLL-----FFYANCFEIEEAK--RVFD 143
+ G+ L++ YEC E +G G + F FE A R+FD
Sbjct: 603 VRLGRSYFTLMMDESIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFD 662
Query: 144 ELHE-DNELLWSLMLVGYVQCNLMSDA-FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
E N L N ++ F + D + S ++ +GCE+
Sbjct: 663 CCREYGNRKLGERAAKCINDSNPLTPVQFVATVDYESNDGGREAESTS-FSSEGEGCEEL 721
Query: 202 LKLFRWMRESGENMPNEYT-----------------FDSVIRACARLGAFCEGK------ 238
F E+ ++P T F S +RA A L
Sbjct: 722 P--FSLEGEASGSLPAPLTTRPLAIWYGMARHHHHHFVSHLRASAPLADLLRSAPNLPAA 779
Query: 239 -VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
H +K F + + L+ Y A RV+D + +P + N+L++ +
Sbjct: 780 RAAHARALKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARL 839
Query: 298 GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM---------------- 341
GR DA +F+ + + + SYN++I A + + D+ M
Sbjct: 840 GRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASAL 899
Query: 342 -------PHRSIISLNTMISVIPEM------------------------------ERNPV 364
R+ + ++ ++S P ERN V
Sbjct: 900 SACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIV 959
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+WNS+I+ Y QN +AL L+++M K T + + AC+ L + ++G+ +HA +
Sbjct: 960 SWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARV 1019
Query: 425 VKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
VK+ F ++ + +LVDMY++CG A+ F ++S +V + T+L+ GY+ +A
Sbjct: 1020 VKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDA 1079
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT----- 538
++F M+E++++ + +++A + G E +++F +K V PT HYT
Sbjct: 1080 QMVFSQMVEKNVI----AWNVLIAAYAQNGEEEEALRLFVRLKRESVWPT--HYTYGNVL 1133
Query: 539 --C--VVDL-LGRSGHLHEAEE-FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
C V DL LG+ H+H +E F D E D V +L+ +++ G + ++M
Sbjct: 1134 NACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERM 1193
Query: 593 FGLDKKPISAYVI 605
D +A ++
Sbjct: 1194 AARDNVSWNAMIV 1206
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 149/340 (43%), Gaps = 42/340 (12%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M T IVS + CGR + A+ +F+ M R +VSWN ML GY + +L L
Sbjct: 318 MVMSTSIVS---GLASCGR---IADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLL 371
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M + + + T ++LS C + + G+++H +K G+ + + L+ Y+
Sbjct: 372 FQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSK 431
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C + A+R+ +F ++D W LISGY
Sbjct: 432 CGCLRSAERLL-----------------------------LFEMGSERDSYSWNSLISGY 462
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
+ E AL M+ E PN+ TF S + ACA + +G +H +I+ G+E
Sbjct: 463 ERH-SMSEAALYALTKMQS--EVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEI 519
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
D+ + LI+ YC C FD ++R+++ + + NS+I G G+ E +F+ +
Sbjct: 520 DDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQ 579
Query: 312 ----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
+A+S+++ + G V + F M SII
Sbjct: 580 KQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDESII 619
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 167/389 (42%), Gaps = 45/389 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS IT R+ + A+ +F QM + V++WN ++ Y++ + +E+L L + R
Sbjct: 1060 VVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKR 1119
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY------ECFEFVGSGLLFFYAN 131
+V T+ +L+ C + L G+Q H VLK G+ E FVG+ L+ Y
Sbjct: 1120 ESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLK 1179
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKL 187
I++ +VF+ + + + W+ M+VG+ Q DA +F +M D V +
Sbjct: 1180 TGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGV 1239
Query: 188 ISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
+S S E+ + FR M E +P++ + +I R G K V L+ +
Sbjct: 1240 LSACGHS-GLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHL---KEVEELIKEM 1295
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
E D + +L+ G+ R++ +E MG +L
Sbjct: 1296 SMEPDAVLWASLL----------GSCRLHKNVE----------------MGEWAAGKLF- 1328
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
L NS Y + YA G+ D R+ M HR +S S I E+ R +
Sbjct: 1329 -ELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRG-VSKQPGCSWI-EIGRKVSVFL 1385
Query: 368 SMISGY-VQNNLHEKALQLYMTMRKLAID 395
+ +G+ +N +H + M M ++++D
Sbjct: 1386 ARDNGHPCKNEIHAILRIIQMQMSRVSVD 1414
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/656 (32%), Positives = 359/656 (54%), Gaps = 63/656 (9%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
L+ + F+ +L C + S+ + + +H ++K+ + F+ + L+ Y C +E+A++V
Sbjct: 17 LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKV 76
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD + + N W+ +L + + +A ++F MP++D W ++SG+A+ D E+A
Sbjct: 77 FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQR-DRFEEA 135
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
L+ M S + + NEY+F S + ACA L G +HGL+ K + D +G AL++
Sbjct: 136 LRFVVDM-HSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVD 194
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSIS 317
Y C A R +D ++ + + NSLI G A +F R+ E + I+
Sbjct: 195 MYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEIT 254
Query: 318 Y------------------------------------NSMIKGYAVYGQVDDSKRLFEKM 341
N+++ YA +V++++ +F++M
Sbjct: 255 LASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314
Query: 342 PHRSIISLNTMISVIPE--------------MERNPVTWNSMISGYVQNNLHEKALQLYM 387
P R ++S +M+S + MERN V+WN++I+GY QN +E+A++L++
Sbjct: 315 PLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFL 374
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF------ESNVYVGTSLVD 441
+++ +I T TF L +AC+ L L+ G+ H H++K F +S+++VG SL+D
Sbjct: 375 LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLID 434
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY +CG + D + F + + +W A++ GY+ +G G+EA+ +F ML P+ T
Sbjct: 435 MYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVT 494
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
+GVLSAC AGLV EG F+SM +G+VP +HYTC+VDLLGR+G L EA I+ M
Sbjct: 495 MIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTM 554
Query: 561 PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKM 620
P+E DAVVWG+LL+AC N+ +G+ A+++ +D YV+LSN+YA LG+W +
Sbjct: 555 PMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVV 614
Query: 621 DIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+RK++ + V K PGCSWI + S +H F V+D+ +P+ IY L+ LT + V
Sbjct: 615 RVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRV 670
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/505 (23%), Positives = 229/505 (45%), Gaps = 87/505 (17%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
+ +A+ FD M +R +VSWN+++ Y + ++L + M ++ +E T +++ S
Sbjct: 202 VASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASA 261
Query: 94 CAQLNSLIDGKQIHCLVLK-SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
CA L+++ +G QIH V+K Y +G+ L+ YA C + EA+ VFD + + +
Sbjct: 262 CASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVS 321
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM-RES 211
+ M+ GY + + + A +F M +++VV W LI+GY ++ + E+A++LF + RES
Sbjct: 322 ETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGEN-EEAVRLFLLLKRES 380
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P YTF +++ ACA L G+ H ++K GF F
Sbjct: 381 --IWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSG----------------- 421
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
E+ + NSLI+ + G +ED L+F R+ E +++S+N+MI GYA G
Sbjct: 422 --------EDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYG 473
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
++ +F +M ++SG +++
Sbjct: 474 TEALEIFREM---------------------------LVSGERPDHV------------- 493
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV----KTPFESNVYVGTSLVDMYSRCG 447
T + ACS G +++G+ + P + + T +VD+ R G
Sbjct: 494 --------TMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHY---TCMVDLLGRAG 542
Query: 448 SINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
+++A ++ P+ W +L+ HG + + E +LE D + N+ +V +
Sbjct: 543 CLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPL-NSGPYVLLS 601
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVV 531
+ G + +++ + M+ GV+
Sbjct: 602 NMYAELGRWKDVVRVRKQMRQMGVI 626
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 46/240 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS ++ + + AR +F M R VVSWN ++ GY++ + +E++ L + R
Sbjct: 319 VVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKR 378
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY------ECFEFVGSGLLFFYAN 131
++ TF +L+ CA L L G+Q H +LK G+ + FVG+ L+ Y
Sbjct: 379 ESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMK 438
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C +E+ + VF+ + E + + W+ M+VGY Q +GY
Sbjct: 439 CGLVEDGRLVFERMLERDNVSWNAMIVGYAQ--------------------------NGY 472
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK-------VVHGLL 244
+AL++FR M SGE P+ T V+ AC+ G EG+ + HGL+
Sbjct: 473 GT------EALEIFREMLVSGER-PDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLV 525
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/677 (31%), Positives = 348/677 (51%), Gaps = 89/677 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A +FD +P R +V+W +M+ G ++ +F ++ +L M V+ ++ F ++L
Sbjct: 260 GDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLL 319
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C +L GK++H + + G++ +VG+ +L Y
Sbjct: 320 RACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMY---------------------- 357
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+C M DA +VF + ++VV WT +I+G+A+ ++A F M ES
Sbjct: 358 ---------TKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQH-GRIDEAFLFFNKMIES 407
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PN TF S++ AC+ A G+ + +I+ G+ D+ + AL+ Y C +
Sbjct: 408 GIE-PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKD 466
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISY--------- 318
A RV++++ + A N++I + + ++A F L + NS ++
Sbjct: 467 AHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKS 526
Query: 319 --------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
N+++ + G + +K LF MP R ++S
Sbjct: 527 SDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVS---- 582
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
WN++I+G+VQ+ ++ A + M++ I + TF+ L +AC+
Sbjct: 583 -------------WNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPE 629
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+L +G+ LHA + + F+ +V VGT L+ MY++CGSI DA F + NV +WT+++
Sbjct: 630 ALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIT 689
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
GY+ HG G EA+ LF M ++ + P+ TFVG LSAC AGL+ EG+ F+SMK + + P
Sbjct: 690 GYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEP 749
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+EHY C+VDL GR+G L+EA EFI M +E D+ VWGALL AC +N+E+ E+AAQK
Sbjct: 750 RMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKK 809
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
LD +VILSNIYA G W + +RK + V K PG SWIE++ +VH F +
Sbjct: 810 LELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSD 869
Query: 653 DRNNPNCNVIYATLEHL 669
D+ +P I+A LE L
Sbjct: 870 DKTHPQTEEIHAELERL 886
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/593 (24%), Positives = 283/593 (47%), Gaps = 90/593 (15%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I + G ++A+ +FD M + V SWN +L GY + ++E+ L M + +VK
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVK 208
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ TF ++L+ CA ++ G++++ L+LK+G++ FVG+ L+ + C +I +A +V
Sbjct: 209 PDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKV 268
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD L P +D+V WT +I+G A+ ++A
Sbjct: 269 FDNL-------------------------------PTRDLVTWTSMITGLARH-GRFKQA 296
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
LF+ M E G P++ F S++RAC A +GK VH + + G++ + +G A++
Sbjct: 297 CNLFQRMEEEGVQ-PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILS 355
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSIS 317
Y C + + A+ V+D ++ + + ++I G GRI++A L FN++ E+ N ++
Sbjct: 356 MYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVT 415
Query: 318 YNSMIKG-----------------------------------YAVYGQVDDSKRLFEKMP 342
+ S++ YA G + D+ R+FEK+
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS 475
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
++N V WN+MI+ YVQ+ ++ AL + + K I STF+
Sbjct: 476 -----------------KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFT 518
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ + C SL+ G+ +H ++K ES+++V +LV M+ CG + A+ F+ +
Sbjct: 519 SILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKR 578
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
++ +W ++ G+ HG A F++M E I P+ TF G+L+AC + EG ++
Sbjct: 579 DLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLH 638
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + T ++ + + G + +A + +P + + W ++++
Sbjct: 639 ALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITG 690
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 266/552 (48%), Gaps = 56/552 (10%)
Query: 46 IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQ 105
I+ N +L SK +F+E++ ++ + S++++ T+S +L +C + +L DG++
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 106 IHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNL 165
I+ + KSG + F+ + L+ YA C AK++FD++ E + W+L+L GYVQ L
Sbjct: 132 IYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
+AF + +M + V P++ TF S++
Sbjct: 192 YEEAFKLHEQMVQDSV---------------------------------KPDKRTFVSML 218
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
ACA +G+ ++ L++K G++ D +G ALI + C A +V+D L L
Sbjct: 219 NACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLV 278
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
S+I GL GR + A +F R+ E + +++ S+++ ++ K++ +M
Sbjct: 279 TWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM 338
Query: 342 PH----------RSIISLNTMISVIPEM--------ERNPVTWNSMISGYVQNNLHEKAL 383
+I+S+ T + + RN V+W +MI+G+ Q+ ++A
Sbjct: 339 KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAF 398
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+ M + I+ R TF + ACS +L++GQ + H+++ + S+ V T+L+ MY
Sbjct: 399 LFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMY 458
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++CGS+ DA F IS NV AW A++ Y H A+ F+ +L++ I PN++TF
Sbjct: 459 AKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFT 518
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
+L+ C + + G + + G+ L +V + G L A+ DMP +
Sbjct: 519 SILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-K 577
Query: 564 LDAVVWGALLSA 575
D V W +++
Sbjct: 578 RDLVSWNTIIAG 589
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 234/723 (32%), Positives = 365/723 (50%), Gaps = 114/723 (15%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N A++ R G L AR L D+MP R VVSWNT++ ++ + E+L L M R
Sbjct: 76 SYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREG 135
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ T +++LS C + +L DG++ H L +K G + FV + LL Y C +E+A
Sbjct: 136 LVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAV 195
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
R+FD + NE+ ++ M+ G VQ + DA +F +M + V V +S S C
Sbjct: 196 RLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGS---CA 252
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+A FD V+RA F G+ +H L+++ GF D+ +G +L
Sbjct: 253 QACA---------------SEFD-VVRA------FRLGQCIHALIVRKGFGSDQHVGNSL 290
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR-------------------- 299
I+ Y C D A++V+D L N + N LI G G
Sbjct: 291 IDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNE 350
Query: 300 ---------------IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
+ A +F++++ + ++N+++ GY D+ LF +M H+
Sbjct: 351 VTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQ 410
Query: 345 S-------------------IISLNTMI----------------SVIPEM---------- 359
+ I+ L T + S + +M
Sbjct: 411 NVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIA 470
Query: 360 --------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
ER+ V WNSMISG ++L+E+A + MR + T S+++ + ++C+ L
Sbjct: 471 RIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARL 530
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
S+ QG+ +HA +VK ++ NVYVG++L+DMY++CG+++DA+ F + + N+ AW ++
Sbjct: 531 SSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMI 590
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGV 530
+GY+ +G G +AV LFE ML + P+ TF+ VL+ C +GLV+E + F SM+S YG+
Sbjct: 591 HGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGI 650
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
P EHYTC++D LGR+G L E E I +MP + D +VW LL+AC N E+GE AA+
Sbjct: 651 TPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAK 710
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
+F LD K S YV+LSNIYA LG+ G +R ++ V K G SWI+ VHAF
Sbjct: 711 HLFRLDPKNPSPYVLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWIDHKDGVHAFM 770
Query: 651 VED 653
V D
Sbjct: 771 VAD 773
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/589 (22%), Positives = 258/589 (43%), Gaps = 105/589 (17%)
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
VL +G F+ + L+ Y+ +A R F L N ++ L + + A
Sbjct: 34 VLAAGLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAA 93
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+ +MP ++VV W +I+ A+S E AL+L+ M G +P +T SV+ AC
Sbjct: 94 RALLDEMPDRNVVSWNTVIAALARSERAGE-ALELYEGMLREGL-VPTHFTLASVLSACG 151
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
+ A +G+ HGL +K G + + + AL+ Y C + A+R++D + +P + +
Sbjct: 152 AVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTA 211
Query: 290 LINGLISMGRIEDAELIFNRLTEAN------SISY------------------------- 318
++ GL+ G ++DA +F R+ + ++S
Sbjct: 212 MMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCI 271
Query: 319 ----------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------- 354
NS+I Y Q+D++ ++F+ +P+ S +S N +I+
Sbjct: 272 HALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSY 331
Query: 355 --------VIPEMERNP---------------------------------VTWNSMISGY 373
++ E P TWN+++SGY
Sbjct: 332 AKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGY 391
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
Q LH+ ++L+ M+ + R+T +V+ +CS LG L G +H+ V+ +++
Sbjct: 392 CQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDM 451
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+V + LVDMYS+CG I A+ F+ ++ +V W ++++G + H L EA F+ M
Sbjct: 452 FVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGN 511
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
++P +++ ++++C R V +G +I + G + + ++D+ + G++ +A
Sbjct: 512 GMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDA 571
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA---QKMFGLDKKP 599
F D + + V W ++ + GE+A + M +++P
Sbjct: 572 RVFF-DCMVTKNIVAWNEMIHG---YAQNGFGEKAVDLFEYMLTTEQRP 616
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 170/371 (45%), Gaps = 77/371 (20%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V+ + + C + +++AR +FD++ +V +WNT+L GY + +++ L M
Sbjct: 351 VTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQ 410
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
NV+ + TT + ILS C++L L G Q+H ++ FV SGL+ Y+ C +I A
Sbjct: 411 NVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIA 470
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +F+ + E + + W+ M+ G +L +AFD
Sbjct: 471 RIIFNRMTERDVVCWNSMISGLAIHSLNEEAFD--------------------------- 503
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
F+ MR +G MP E ++ S+I +CARL + +G+ +H ++K G++ + +G A
Sbjct: 504 -----FFKQMRGNGM-MPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSA 557
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
LI+ Y C G ++DA + F+ + N +++
Sbjct: 558 LIDMYAKC-------------------------------GNMDDARVFFDCMVTKNIVAW 586
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N MI GYA G + + LFE M + E + VT+ ++++G + L
Sbjct: 587 NEMIHGYAQNGFGEKAVDLFEYM-------------LTTEQRPDGVTFIAVLTGCSHSGL 633
Query: 379 HEKALQLYMTM 389
++A+ + +M
Sbjct: 634 VDEAIAFFNSM 644
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 188/455 (41%), Gaps = 73/455 (16%)
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA 303
++ G D + L+E Y A+R + L P + N+ ++ G ++ A
Sbjct: 34 VLAAGLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAA 93
Query: 304 ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN-TMISVIPE---- 358
+ + + + N +S+N++I A + ++ L+E M ++ + T+ SV+
Sbjct: 94 RALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAV 153
Query: 359 -----------------MERNPVTWNSMISGYVQNNLHEKALQLYMTM------------ 389
++ N N+++ Y + E A++L+ M
Sbjct: 154 AALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMM 213
Query: 390 ----RKLAIDRTRSTFSVLFHA---------CSCLGSLQQ--------------GQLLHA 422
+ ++D F+ + + S LGS Q GQ +HA
Sbjct: 214 GGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHA 273
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+V+ F S+ +VG SL+DMY++C +++A F S+ + + +W L+ G+ G ++
Sbjct: 274 LIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAK 333
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP--TLEHYTCV 540
A+ + +M E PN T+ +L++C++A V +F + V TL C
Sbjct: 334 ALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQ 393
Query: 541 VDLLGRSGHLHEAEEF--IKDMPIELDAVVWGALLSACWFWMNMEVGER--AAQKMFGLD 596
+L H E F ++ ++ D +LS+C +++G + +A F L
Sbjct: 394 EEL-----HQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLH 448
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
A ++ ++Y+ G+ G I R+T +V
Sbjct: 449 NDMFVASGLV-DMYSKCGQIGIARIIFNRMTERDV 482
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/677 (31%), Positives = 348/677 (51%), Gaps = 89/677 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A +FD +P R +V+W +M+ G ++ +F ++ +L M V+ ++ F ++L
Sbjct: 260 GDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLL 319
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C +L GK++H + + G++ +VG+ +L Y
Sbjct: 320 RACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMY---------------------- 357
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+C M DA +VF + ++VV WT +I+G+A+ ++A F M ES
Sbjct: 358 ---------TKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQH-GRIDEAFLFFNKMIES 407
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PN TF S++ AC+ A G+ + +I+ G+ D+ + AL+ Y C +
Sbjct: 408 GIE-PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKD 466
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISY--------- 318
A RV++++ + A N++I + + ++A F L + NS ++
Sbjct: 467 AHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKS 526
Query: 319 --------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
N+++ + G + +K LF MP R ++S
Sbjct: 527 SDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVS---- 582
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
WN++I+G+VQ+ ++ A + M++ I + TF+ L +AC+
Sbjct: 583 -------------WNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPE 629
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+L +G+ LHA + + F+ +V VGT L+ MY++CGSI DA F + NV +WT+++
Sbjct: 630 ALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIA 689
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
GY+ HG G EA+ LF M ++ + P+ TFVG LSAC AGL+ EG+ F+SMK + + P
Sbjct: 690 GYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEP 749
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+EHY C+VDL GR+G L+EA EFI M +E D+ VWGALL AC +N+E+ E+AAQK
Sbjct: 750 RMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKK 809
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
LD +VILSNIYA G W + +RK + V K PG SWIE++ +VH F +
Sbjct: 810 LELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSD 869
Query: 653 DRNNPNCNVIYATLEHL 669
D+ +P I+A LE L
Sbjct: 870 DKTHPQTEEIHAELERL 886
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/583 (25%), Positives = 277/583 (47%), Gaps = 89/583 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I N I + G ++A+ +FD M + V SWN +L GY + ++E+ L M +
Sbjct: 145 IFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQ 204
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+VK ++ TF ++L+ CA ++ G++++ L+LK+G++ FVG+ L+ + C +I +
Sbjct: 205 DSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGD 264
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +VFD L P +D+V WT +I+G A+
Sbjct: 265 ATKVFDNL-------------------------------PTRDLVTWTSMITGLARH-GR 292
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
++A LF+ M E G P++ F S++RAC A +GK VH + + G++ + +G
Sbjct: 293 FKQACNLFQRMEEEGVQ-PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGT 351
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA---- 313
A++ Y C + + A+ V+D ++ + + ++I G GRI++A L FN++ E+
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411
Query: 314 NSISYNSMIKG-----------------------------------YAVYGQVDDSKRLF 338
N +++ S++ YA G + D+ R+F
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVF 471
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
EK+ ++N V WN+MI+ YVQ+ ++ AL + + K I
Sbjct: 472 EKIS-----------------KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNS 514
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
STF+ + + C SL+ G+ +H ++K ES+++V +LV M+ CG + A+ F+
Sbjct: 515 STFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFND 574
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ ++ +W ++ G+ HG A F++M E I P+ TF G+L+AC + EG
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
++ + + T ++ + + G + +A + +P
Sbjct: 635 RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP 677
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 266/552 (48%), Gaps = 56/552 (10%)
Query: 46 IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQ 105
I+ N +L SK +F+E++ ++ + S++++ T+S +L +C + +L DG++
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 106 IHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNL 165
I+ + KSG + F+ + L+ YA C AK++FD++ E + W+L+L GYVQ L
Sbjct: 132 IYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
+AF + +M + V P++ TF S++
Sbjct: 192 YEEAFKLHEQMVQDSV---------------------------------KPDKRTFVSML 218
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
ACA +G+ ++ L++K G++ D +G ALI + C A +V+D L L
Sbjct: 219 NACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLV 278
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
S+I GL GR + A +F R+ E + +++ S+++ ++ K++ +M
Sbjct: 279 TWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM 338
Query: 342 PH----------RSIISLNTMISVIPEM--------ERNPVTWNSMISGYVQNNLHEKAL 383
+I+S+ T + + RN V+W +MI+G+ Q+ ++A
Sbjct: 339 KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAF 398
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+ M + I+ R TF + ACS +L++GQ + H+++ + S+ V T+L+ MY
Sbjct: 399 LFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMY 458
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++CGS+ DA F IS NV AW A++ Y H A+ F+ +L++ I PN++TF
Sbjct: 459 AKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFT 518
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
+L+ C + + G + + G+ L +V + G L A+ DMP +
Sbjct: 519 SILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-K 577
Query: 564 LDAVVWGALLSA 575
D V W +++
Sbjct: 578 RDLVSWNTIIAG 589
>gi|225437951|ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like [Vitis vinifera]
Length = 743
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/658 (34%), Positives = 364/658 (55%), Gaps = 32/658 (4%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +V+ N ++ + G+L A F++MP R VVSW ++LCG + + E+ L +
Sbjct: 104 ERNVVTYNAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNV 163
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M NV +++++L + L + +++ + + + +G YA
Sbjct: 164 MPERNV----VSWNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAG----YAEHSR 215
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+EEA+ +FD + + N + W+ M+ GY + + + + +F KMP+++VV WT +I G+A +
Sbjct: 216 MEEARVLFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWN 275
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
++AL LF M+ + + PN+ TF S+ ACA +G G H LI +++D+
Sbjct: 276 -GFYKEALLLFLEMKGNYDMKPNDETFISLAYACAGIGFPHLGMQFHAHLIINCWDYDDY 334
Query: 255 IG---GALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRL 310
G +LI Y D A ++ R S NS+ING I +G++E A+ +F+ +
Sbjct: 335 DGRLFKSLIHMYSMFGFMDFAWYIFFRNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTI 394
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
+ IS+ SMI GY GQ+ + LF MP +R+ V W M+
Sbjct: 395 PVRDKISWTSMINGYFNVGQIAKACYLFNNMP-----------------DRDAVAWTVMV 437
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
SG+VQN L +A L+ MR + STFS+L A + L QG+ H L+KT FE
Sbjct: 438 SGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFE 497
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
++ + SL+ MY++CG I DA + FS + S ++ +W +++ G+SHHGL SEA+ +FE M
Sbjct: 498 FDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSHHGLTSEALKVFEAM 557
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGH 549
L PN+ TF+G+LSAC AGL+N+G ++F +M + + P LEHY C+V+LLGR+G
Sbjct: 558 LTSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEHYVCMVNLLGRAGK 617
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWM-NMEVGERAAQKMFGLDKKPISAYVILSN 608
+ EAEEFI +P E D +WGALL C F M N V RAA+++ LD A+V+L N
Sbjct: 618 VEEAEEFISKLPFEPDLTIWGALLGVCGFGMINTGVARRAAKRLLELDPLNAPAHVVLCN 677
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
I+A +G+ ++ +RK + V+K PGCSWI L + F DR +P + + + L
Sbjct: 678 IHASIGQRAEEGQLRKEMGLKGVRKVPGCSWILLKGEPYVFLSGDRIHPQADEMLSLL 735
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 221/498 (44%), Gaps = 102/498 (20%)
Query: 134 EIEEAKRVFDELHE----DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
+ EA+ + DE+ D + W+ +L + + + +A +F MP+++VV + ++S
Sbjct: 56 RLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPERNVVTYNAMLS 115
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
GY + C + R+ E MP E VV + CG
Sbjct: 116 GYVQ----CGRLSDACRFFEE----MP-------------------ERNVVSWTSLLCGL 148
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
IG A +++ + + + NS++ GLI G++E+A +FN
Sbjct: 149 ANAGRIG--------------EARELFNVMPERNVVSWNSMLVGLIRSGQLEEARRVFNE 194
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------VI 356
+ + +S+N MI GYA + ++++++ LF+ M R++++ +MIS +
Sbjct: 195 MPVKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLF 254
Query: 357 PEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMR-KLAIDRTRSTFSVLFHACSCLGSL 414
+M ERN V+W +MI G+ N +++AL L++ M+ + TF L +AC+ +G
Sbjct: 255 QKMPERNVVSWTAMIGGFAWNGFYKEALLLFLEMKGNYDMKPNDETFISLAYACAGIGFP 314
Query: 415 QQGQLLHAHLVKTPFESNVYVG---TSLVDMYS--------------------------- 444
G HAHL+ ++ + Y G SL+ MYS
Sbjct: 315 HLGMQFHAHLIINCWDYDDYDGRLFKSLIHMYSMFGFMDFAWYIFFRNSMSYNTQSCNSM 374
Query: 445 -----RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
R G + AQ+ F +I + +WT+++NGY + G ++A LF M ++D A
Sbjct: 375 INGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMPDRD----A 430
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF--- 556
+ ++S V+ L E +F M+ GV P ++ ++ G +L + +F
Sbjct: 431 VAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCL 490
Query: 557 IKDMPIELDAVVWGALLS 574
+ E D ++ +L+S
Sbjct: 491 LMKTQFEFDLILQNSLIS 508
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/689 (32%), Positives = 369/689 (53%), Gaps = 83/689 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES--------- 68
+V +N I+ + G LV AR LFD+MP R VSW+ ++ G K+ + +ES
Sbjct: 87 LVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPF 146
Query: 69 ----------------------LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
L L + S V+ N+ TF++++ C +L G I
Sbjct: 147 QNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSI 206
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
LV+K+G+E + V + L+ EI+ A+RVFD + + + + W+ +L YV+ +
Sbjct: 207 LGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDL 266
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
+A +F +MP+++ + W+ +I+ Y++S E+ALKLF M + G PN F +
Sbjct: 267 REARRIFDEMPERNEISWSAMIARYSQS-GYAEEALKLFSKMVQEGFK-PNISCFACTLS 324
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
A A L A G +HG + K G + D IG +LI+ YC C
Sbjct: 325 ALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKC-------------------- 364
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
G+ +D L+F+ + E N + +NSM+ GY++ G++++ + LFE +P
Sbjct: 365 -----------GKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEELFELIP---- 409
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
E+N +W ++J+GY++N EK L+++ T+ +STFS +
Sbjct: 410 -------------EKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLC 456
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
AC+ + SL +G +H ++K + +++VGT+L DMY++CG I ++ F + N +
Sbjct: 457 ACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEIS 516
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLE-QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
WT ++ G + G E+++LFE M ++ PN + VL AC GLV++G+ F SM
Sbjct: 517 WTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSM 576
Query: 526 -KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
K YG+ P +HYTCVVDLL RSG L+EAEEFI+ +P + +A W ALLS C + + ++
Sbjct: 577 EKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKI 636
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
ER A+K++ L + + YV+LSNIYA G+W +IRK + +KK GCSW+E+ +
Sbjct: 637 AERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRN 696
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+VH+F ED ++ + IY TL+ L + +
Sbjct: 697 QVHSFYSEDGSHSQSDEIYGTLQLLRSEM 725
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 156/323 (48%), Gaps = 21/323 (6%)
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
S+++ + G +G V+H LIK GF I L+ Y C F ++ +
Sbjct: 26 SLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGS 85
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
L SN +I+ + G + A L+F+ + E N +S++++I G YG+V++S FE+ P
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
++++S W + ISG+V+N L+ +AL+L+ + + + TF+
Sbjct: 146 FQNVVS-----------------WTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFT 188
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ AC LG G + +VK FE + V SL+ + R G I+ A+ F +
Sbjct: 189 SVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKR 248
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
+V +WTA+++ Y G EA +F+ M E+ N ++ +++ ++G E +K+F
Sbjct: 249 DVVSWTAILDAYVETGDLREARRIFDEMPER----NEISWSAMIARYSQSGYAEEALKLF 304
Query: 523 RSMKSYGVVPTLEHYTCVVDLLG 545
M G P + + C + L
Sbjct: 305 SKMVQEGFKPNISCFACTLSALA 327
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 165/392 (42%), Gaps = 63/392 (16%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +V N + NG+L LF+ +P + SW T+J GY + + ++ L + +T
Sbjct: 379 EKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNT 438
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
+ S N++TFS++L CA + SL G +H ++K G + FVG+ L YA C +
Sbjct: 439 LLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGD 498
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I +K+VF+ + E NE+ W++M+ G + SG+A
Sbjct: 499 IGSSKQVFERMPEKNEISWTVMIQGLAE--------------------------SGFAV- 531
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
++L LF M + E PNE SV+ AC+ G V GL E
Sbjct: 532 -----ESLILFEEMERTSEVAPNELMLLSVLFACSHCGL-----VDKGLWYFNSMEKVYG 581
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLE-------NPCLNASNSLINGLISMGRIEDAELIF 307
I + C + + R+Y+ E P NA +L++G + AE
Sbjct: 582 IKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTA 641
Query: 308 NR---LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV 364
+ L E NS Y + YA G+ D + + M + + +
Sbjct: 642 KKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGL------------KKSGGC 689
Query: 365 TW----NSMISGYVQNNLHEKALQLYMTMRKL 392
+W N + S Y ++ H ++ ++Y T++ L
Sbjct: 690 SWVEVRNQVHSFYSEDGSHSQSDEIYGTLQLL 721
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 375 QNNLHEKALQLYMTMRKLA-IDRTRSTFS---VLFHACSCLGSLQQGQLLHAHLV--KTP 428
Q + K L LY+ RK A ID+ F ++ C +Q G L+ A L+ + P
Sbjct: 55 QRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMP 114
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
E N ++L+ + G + ++ F NV +WTA ++G+ +GL EA+ LF
Sbjct: 115 -ERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFF 173
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLL 544
+LE + PN TF V+ AC G GM I + G EHY V + L
Sbjct: 174 RLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAG----FEHYLSVSNSLITLS 229
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE-RAAQKMFGLDKKP 599
R G + A M + D V W A+L A +E G+ R A+++F D+ P
Sbjct: 230 LRMGEIDLARRVFDRME-KRDVVSWTAILDA-----YVETGDLREARRIF--DEMP 277
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 234/752 (31%), Positives = 377/752 (50%), Gaps = 95/752 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS N I+ G++ AR F +MP R VVSWN+++ G+ + + +S+ + M R
Sbjct: 115 VVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGR 174
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V + + + +L C L G Q+H LV+K G++C GS LL YA C +++
Sbjct: 175 CGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDD 234
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-------------------- 177
+ VF EL E N + WS M+ G VQ + + ++F +M
Sbjct: 235 SLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAA 294
Query: 178 -------------------KKDVVVWTKLISGYAK------------SVDGCE------- 199
D++V T + YAK S+ C
Sbjct: 295 LSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAI 354
Query: 200 -----------KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
+ALK F+ + ++G +E T + ACA + EG+ VHGL +K
Sbjct: 355 IVGYARSDRGFQALKSFQLLLKTGLGF-DEITLSGALNACASIRGDLEGRQVHGLAVKSI 413
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED-----A 303
+ + A+++ Y C+A A ++D +E + N++I G E+ A
Sbjct: 414 SMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFA 473
Query: 304 ELIFNRLTEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+I +R+ E + +Y S++K G ++ ++ S F+ +++ +
Sbjct: 474 SMIHSRM-EPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKC 532
Query: 354 SVIPEM--------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
+I + ++ V+WN++ISG+ E A + + M ++ ++ T++ +
Sbjct: 533 GMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVL 592
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
C+ L ++ G+ +HA ++K +S+VY+ ++LVDMYS+CG++ D+Q F + +
Sbjct: 593 DTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFV 652
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
W A++ GY+HHGLG EA+ LFE M ++ PN ATFV VL AC GLV++G+ F M
Sbjct: 653 TWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVM 712
Query: 526 KS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
S YG+ P EHY+C+VD+LGRSG + EA ++ MP E DAV+W LLS C N+EV
Sbjct: 713 LSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEV 772
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
E+A + + LD + SA V+LSNIYA G WG ++RK + H ++KK+PGCSWIEL
Sbjct: 773 AEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKD 832
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
VHAF V D+ +P IY L L + SV
Sbjct: 833 EVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSV 864
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 234/493 (47%), Gaps = 86/493 (17%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TFS I C++ NSL GKQ H ++ G+E FV + L+ Y C ++ A +VFD++
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ + + ++ ++ GY C M A F +MP++DVV W +ISG+ ++ + C K++ +F
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGE-CRKSIDVF 169
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M G + + V++AC L G VHGL++K GF+ D G AL+ Y
Sbjct: 170 LEMGRCGVGF-DRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAK 228
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
C+ R++D+ +F+ L E N +S+++MI G
Sbjct: 229 CK-------------------------------RLDDSLSVFSELPEKNWVSWSAMIAGC 257
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
+ + LF++M
Sbjct: 258 VQNDRNVEGLELFKEM-------------------------------------------- 273
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ + + ++S ++ LF +C+ L +L+ G+ LH+H +K+ F S++ VGT+ +DMY++
Sbjct: 274 ----QGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAK 329
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CG + DAQ SS+ ++ ++ A++ GY+ G +A+ F+++L+ + + T G
Sbjct: 330 CGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGA 389
Query: 506 LSAC--VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
L+AC +R L EG ++ + + ++D+ G+ L EA + DM
Sbjct: 390 LNACASIRGDL--EGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLF-DMMER 446
Query: 564 LDAVVWGALLSAC 576
DAV W A+++AC
Sbjct: 447 RDAVSWNAIIAAC 459
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/699 (32%), Positives = 360/699 (51%), Gaps = 124/699 (17%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES 68
++ + ET +++T ++ R G+L AR +FD++P+R S+N +L Y++ + DE+
Sbjct: 45 KSPVAGETFLLNT--LVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEA 102
Query: 69 ---------------------------------LSLVSTMHRSNVKLNETTFSTILSVCA 95
L ++ MH + LN +F++ LS CA
Sbjct: 103 RALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACA 162
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
G+Q+H LV +S H D+ + S
Sbjct: 163 AEKDSRTGEQVHGLVARSP-------------------------------HADDVHIRSA 191
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
++ Y +C DA VF MP+++VV W LI+ Y ++ E AL LF M +G +
Sbjct: 192 LVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGE-ALMLFVEMMAAGFS- 249
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI-GGALIEFYCGCEAFDGAMR 274
P+E T SV+ ACA L A EG+ VH ++KC D+ + AL++ Y C
Sbjct: 250 PDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKC-------- 301
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
GR +A IF+ + + +S S++ GYA V+D+
Sbjct: 302 -----------------------GRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDA 338
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+ +F +M +E+N + WN +I+ Y QN E+A++L++ +++ +I
Sbjct: 339 QVVFSQM-----------------VEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSI 381
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF------ESNVYVGTSLVDMYSRCGS 448
T T+ + +AC + LQ GQ H H++K F ES+V+VG SLVDMY + GS
Sbjct: 382 WPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGS 441
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
I+D F +++ + +W A++ GY+ +G +A+ LFE ML + P++ T +GVLSA
Sbjct: 442 IDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSA 501
Query: 509 CVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C +GLV+EG + F SM + +G+ P+ +HYTC+VDLLGR+GHL EAEE I DMP+E D+V
Sbjct: 502 CGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSV 561
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
+W +LL AC N+E+GE A ++F LD + YV+LSN+YA +GKW + +R+ +
Sbjct: 562 LWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMK 621
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
V K PGCSWIE+ +++ F D+ +P N I+ TL
Sbjct: 622 DRGVSKQPGCSWIEIGRKMNVFLARDKRHPCRNEIHNTL 660
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 82/213 (38%), Gaps = 48/213 (22%)
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+L + HA ++K+P ++ +LV Y+R G + DA+ F I N ++ AL++
Sbjct: 32 NLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLS 91
Query: 473 GYSHHGLGSEAVLLFE---------------------------------IMLEQDIVPNA 499
Y+ G EA LFE M D V NA
Sbjct: 92 AYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNA 151
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH------YTCVVDLLGRSGHLHEA 553
+F LSAC G ++ +G+V H + +VD+ + +A
Sbjct: 152 YSFASALSACAAEKDSRTGEQV------HGLVARSPHADDVHIRSALVDMYAKCERPEDA 205
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
MP E + V W +L++ + N VGE
Sbjct: 206 RRVFDAMP-ERNVVSWNSLITC--YEQNGPVGE 235
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/681 (32%), Positives = 361/681 (53%), Gaps = 56/681 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T R V+A +F +M + VS+N+++ G ++ D +L L + M R +K
Sbjct: 252 NALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLK 311
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T +++LS CA +L G+Q+H V+K+G V LL Y NC +I+ A +
Sbjct: 312 PDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEM 371
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F +N +LW++MLV + + + +S++F +F +M K ++
Sbjct: 372 FLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLI------------------- 412
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
PN++T+ S++R C +GA G+ +H +IK GF+F+ + LI+
Sbjct: 413 --------------PNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLID 458
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSIS 317
Y D A + L + + +LI+G +A + + NR ++++I
Sbjct: 459 MYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIG 518
Query: 318 YNSMI----------KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-------- 359
++S I +G ++ Q S + +++SL I E
Sbjct: 519 FSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKID 578
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
++ ++WN +ISG+ Q+ E AL+++ M + ++ + TF A + + +++QG+
Sbjct: 579 AKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQ 638
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+HA ++K F+S++ V +L+ Y++CGSI DA+ F + N +W A++ GYS HG
Sbjct: 639 IHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGY 698
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYT 538
G+EAV LFE M + +PN TFVGVLSAC GLV +G+ F SM K +G+VP HY
Sbjct: 699 GNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYA 758
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
CVVDL+ R+G L A +FI++MPIE DA +W LLSAC N+EVGE AAQ + L+ +
Sbjct: 759 CVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPE 818
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
+ YV+LSN+YAV GKW + R+ + + VKK+PG SWIE+ + VHAF V DR +P
Sbjct: 819 DSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPL 878
Query: 659 CNVIYATLEHLTANLNSVVLF 679
+ IY L L + F
Sbjct: 879 ADKIYEFLAELNKKAAEIGYF 899
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 142/598 (23%), Positives = 270/598 (45%), Gaps = 61/598 (10%)
Query: 4 YATQSQTLMTQETLIVS---TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
YA Q + L+ S +N I +NG +++AR +FD + + VSW M+ G+S
Sbjct: 130 YAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFS 189
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ +E++ L MH + + FS++LS C ++ G+Q+H LV K G +
Sbjct: 190 QNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETY 249
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
V + L+ Y+ A++VF ++ +E+ ++ ++ G Q A ++F KM K+D
Sbjct: 250 VCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKM-KRD 308
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
Y K P+ T S++ ACA GA C+G+ +
Sbjct: 309 ----------YLK----------------------PDCVTVASLLSACASNGALCKGEQL 336
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
H +IK G D + GAL++ Y C A ++ + + N ++ + +
Sbjct: 337 HSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNL 396
Query: 301 EDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-SV 355
++ IF ++ N +Y S+++ G +D +++ ++ ++ N + SV
Sbjct: 397 SESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVI-KTGFQFNVYVCSV 455
Query: 356 IPEM------------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
+ +M E + V+W ++ISGY Q+NL +AL+ + M I
Sbjct: 456 LIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSD 515
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
FS AC+ + +L QG+ +HA + + ++ +G +LV +Y+RCG I +A F
Sbjct: 516 NIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFE 575
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
I + + +W L++G++ G +A+ +F M + + TF +SA + +
Sbjct: 576 KIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQ 635
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G +I + G +E ++ + G + +A +MP E + V W A+++
Sbjct: 636 GKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMP-EKNDVSWNAMITG 692
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 146/568 (25%), Positives = 261/568 (45%), Gaps = 59/568 (10%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L +F+ MP R+V SW+ ++ G+ + + L L S M NV E +F+++L
Sbjct: 59 GDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVL 118
Query: 92 SVCAQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
C+ I +QIH ++ G C + + L+ YA I A++VFD L +
Sbjct: 119 RACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDS 178
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W M+ G+ Q +GY E+A+ LF M
Sbjct: 179 VSWVAMISGFSQ--------------------------NGYE------EEAIHLFCEMHT 206
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+G P Y F SV+ C ++ F G+ +H L+ K G + + AL+ Y F
Sbjct: 207 AG-IFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFV 265
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYA 326
A +V+ ++++ + NSLI+GL G + A +F ++ + + ++ S++ A
Sbjct: 266 SAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACA 325
Query: 327 VYGQVDDSKRLFEKMPHRSIIS------------LN-TMISVIPEM-----ERNPVTWNS 368
G + ++L + I S +N + I EM N V WN
Sbjct: 326 SNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNV 385
Query: 369 MISGYVQ-NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
M+ + + +NL E + +++ M+ + + T+ + C+ +G+L G+ +H ++KT
Sbjct: 386 MLVAFGKLDNLSE-SFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKT 444
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F+ NVYV + L+DMY++ G ++ A +++ +V +WTAL++GY+ H L +EA+ F
Sbjct: 445 GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHF 504
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
+ ML + I + F +SAC +N+G +I G L +V L R
Sbjct: 505 KEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARC 564
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + EA + + + D++ W L+S
Sbjct: 565 GRIKEAYLEFEKIDAK-DSISWNGLISG 591
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 126/529 (23%), Positives = 227/529 (42%), Gaps = 67/529 (12%)
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M + N T+ +L +C SL++ K++H +LK G+ + + L+ Y +
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
++ +VF++ MP + V W K+ISG+ +
Sbjct: 61 LDGVVKVFED-------------------------------MPNRSVRSWDKIISGFMEK 89
Query: 195 VDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACA--RLGAFCEGKVVHGLLIKCGFEF 251
+ L LF M E EN+ P E +F SV+RAC+ R+G + +H +I G
Sbjct: 90 -KMSNRVLDLFSCMIE--ENVSPTEISFASVLRACSGHRIG-IRYAEQIHARIICHGLLC 145
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS---LINGLISMGRIEDAELIFN 308
I LI Y A +V+D L C S S +I+G G E+A +F
Sbjct: 146 SPIISNPLIGLYAKNGLIISARKVFDNL---CTKDSVSWVAMISGFSQNGYEEEAIHLFC 202
Query: 309 RLTEANSIS----YNSMIKGYAVYGQVDDSKRL----FEKMPHRSIISLNTMISVIPEM- 359
+ A ++S++ G D ++L F+ N ++++ M
Sbjct: 203 EMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMP 262
Query: 360 -------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
++ V++NS+ISG Q + AL+L+ M++ + T + L
Sbjct: 263 NFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLS 322
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
AC+ G+L +G+ LH++++K S++ V +L+D+Y C I A F + + NV
Sbjct: 323 ACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVL 382
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
W ++ + SE+ +F M + ++PN T+ +L C G ++ G +I +
Sbjct: 383 WNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVI 442
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + + ++D+ + G L A ++ + E D V W AL+S
Sbjct: 443 KTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT-EDDVVSWTALISG 490
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N IT + G + AR F +MP + VSWN M+ GYS+ +E+++L M +
Sbjct: 655 SNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGE 714
Query: 81 KLNETTFSTILSVCAQLNSLIDG 103
N TF +LS C+ + + G
Sbjct: 715 MPNHVTFVGVLSACSHVGLVTKG 737
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/640 (34%), Positives = 348/640 (54%), Gaps = 87/640 (13%)
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
K + E+L ++ M + + + +T+ ++L C SL D K +H ++++ +EC +
Sbjct: 41 KQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDI 100
Query: 121 -VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
+G+ L+ Y + EA+RVFDE MP K
Sbjct: 101 SLGNKLVSIYVKLGSLVEARRVFDE-------------------------------MPVK 129
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
+VV WT +I+ YA+ G ++AL F M++ G PN +TF S++ AC L E
Sbjct: 130 NVVSWTAMIAAYARHEHG-QEALGFFYEMQDVGIQ-PNHFTFASILPACTDLEVLGE--- 184
Query: 240 VHGLLIKCGFEFDESIGGALIEFYC--GCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
H ++K GFE + +G L++ Y GC F A ++D++ + + N++I G +
Sbjct: 185 FHDEIVKGGFESNVFVGNGLVDMYAKRGCIEF--ARELFDKMPQRDVVSWNAMIAGYVQN 242
Query: 298 GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS--- 354
G IEDA +F + + + I++N+M+ GYA G V+++ LFEKMP ++++S NTMI+
Sbjct: 243 GLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYV 302
Query: 355 -------------VIPEM-----------------------------ERNPVTWNSMISG 372
++PE E N V+WN+MI+G
Sbjct: 303 QNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAG 362
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
Y QN E AL+L+ M+ + + TF+++ AC+ L L+QG H ++++ F+S+
Sbjct: 363 YSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSD 422
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V VG +LV MY++CGSI DA+ F + + A+ +A++ GY+ +G E++ LFE M
Sbjct: 423 VLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQF 482
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
+ P+ TFVGVLSAC AGLV+EG + F M + Y + P +EHY C++DLLGR+G
Sbjct: 483 TGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFD 542
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
EA + I MPI+ DA +WG+LLSAC N+++GE+ AQ + L+ + + YV+LSNIYA
Sbjct: 543 EANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYA 602
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
G+W +R R+ +VKK GCSWI + +VHAF V
Sbjct: 603 AAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAFLV 642
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 205/472 (43%), Gaps = 92/472 (19%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + N + + G + AR LFD+MP R VVSWN M+ GY + +++L L
Sbjct: 195 ESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQE 254
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
+ + +V T++T+++ YA C +
Sbjct: 255 IPKRDV----ITWNTMMA-----------------------------------GYAQCGD 275
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+E A +F+++ E N + W+ M+ GYVQ + +AF +F MP+++V+ W +ISG+A++
Sbjct: 276 VENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQN 335
Query: 195 VDGCEKALKLFRWMRE-----------------SGENM-------------PNEYTFDSV 224
E+ALKLF+ M E EN PN TF V
Sbjct: 336 -GQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIV 394
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+ ACA L +G H ++I+ GF+ D +G L+ Y C + + A +V+DR+
Sbjct: 395 LPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDS 454
Query: 285 NASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEK 340
+ +++I G G +++ +F ++ + + +++ ++ G VD+ ++ F+
Sbjct: 455 ASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDI 514
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
M + P ME + MI + ++A L + K+ I
Sbjct: 515 M--------TRFYHITPAMEH----YGCMIDLLGRAGCFDEANDL---INKMPIKPDADM 559
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGSIND 451
+ L AC ++ G+ + HL+ P YV L ++Y+ G +D
Sbjct: 560 WGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYV--LLSNIYAAAGRWDD 609
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 154/339 (45%), Gaps = 42/339 (12%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E ++S N I+ +NGQ+ A LF MP VVSWN M+ GYS+ + + +L L
Sbjct: 319 ERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQ 378
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++K N TF+ +L CA L L G + H +V++SG++ VG+ L+ YA C
Sbjct: 379 MQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGS 438
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
IE+A++VFD + + + S M+VGY +
Sbjct: 439 IEDARKVFDRMRQQDSASLSAMIVGY---------------------------------A 465
Query: 195 VDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
++GC K +L+LF M+ +G P+ TF V+ AC G EG+ ++ + +
Sbjct: 466 INGCSKESLELFEQMQFTGLK-PDRVTFVGVLSACCHAGLVDEGRQYFDIMTRF-YHITP 523
Query: 254 SIG--GALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNR- 309
++ G +I+ FD A + +++ P + SL++ + I+ E +
Sbjct: 524 AMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHL 583
Query: 310 --LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
L N Y + YA G+ DD + +M R +
Sbjct: 584 IALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKV 622
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 132/557 (23%), Positives = 236/557 (42%), Gaps = 89/557 (15%)
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK----------ALKLFRWMRESGEN 214
LM FD+ ++ + + TK G K DG K AL + + M E+G
Sbjct: 4 LMRPVFDIAYRIKARTNTLKTK--EGTGKGNDGLVKSLCKQGRLREALHILQDMVENGI- 60
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF-DESIGGALIEFYCGCEAFDGAM 273
P+ T+DS+++ C + + K++H +I+ FE D S+G L+ Y + A
Sbjct: 61 WPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEAR 120
Query: 274 RVYDRLENPCLNASNSLI-------NGLISMG---RIEDAELIFNRLT------------ 311
RV+D + + + ++I +G ++G ++D + N T
Sbjct: 121 RVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLE 180
Query: 312 --------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS--- 354
E+N N ++ YA G ++ ++ LF+KMP R ++S N MI+
Sbjct: 181 VLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYV 240
Query: 355 -------------VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
IP +R+ +TWN+M++GY Q E A++L+ M + + +
Sbjct: 241 QNGLIEDALKLFQEIP--KRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMI 298
Query: 402 SVLFHACSCLGSLQQGQLLHA-HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ G +Q G + A L + E NV +++ +++ G + +A F ++
Sbjct: 299 A---------GYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMP 349
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
NV +W A++ GYS +G A+ LF M D+ PN TF VL AC ++ +G +
Sbjct: 350 ECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNE 409
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE----LDAVVWGALLSAC 576
+ G + +V + + G + +A + M + L A++ G ++ C
Sbjct: 410 AHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGC 469
Query: 577 WFWMNMEVGERAAQKMF-GLDKKPISAYVILSN-IYAVLGKWGKK-MDIRKRLTHLEVKK 633
+ E E Q F GL ++ +LS +A L G++ DI R H+
Sbjct: 470 ----SKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAM 525
Query: 634 DPGCSWIELNSRVHAFS 650
+ I+L R F
Sbjct: 526 EHYGCMIDLLGRAGCFD 542
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/700 (32%), Positives = 358/700 (51%), Gaps = 124/700 (17%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES 68
++ + ET +++T ++ R G+L AR +FD +P+R S+N +L Y++ + DE+
Sbjct: 45 KSPVAGETFLLNT--LVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDEA 102
Query: 69 ---------------------------------LSLVSTMHRSNVKLNETTFSTILSVCA 95
L ++ MH + LN +F++ LS CA
Sbjct: 103 RALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACA 162
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L G+Q+H LV +S + +G+ L+ YA
Sbjct: 163 AEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYA------------------------- 197
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
+C DA VF MP+++VV W LI+ Y ++ E AL LF M +G
Sbjct: 198 ------KCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGE-ALVLFVEMMATG-FF 249
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI-GGALIEFYCGCEAFDGAMR 274
P+E T SV+ ACA L A EG+ VH ++K D+ + AL++ Y C
Sbjct: 250 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKC-------- 301
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
GR +A IF+ + + +S S++ GYA V+D+
Sbjct: 302 -----------------------GRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDA 338
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+ +F +M +E+N + WN +I+ Y QN E+A++L++ +++ +I
Sbjct: 339 QVVFSQM-----------------VEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSI 381
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF------ESNVYVGTSLVDMYSRCGS 448
T T+ + +AC + LQ GQ H H++K F ES+V+VG SLVDMY + GS
Sbjct: 382 WPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGS 441
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
I+D F +++ + +W A++ GY+ +G +A+ LFE ML + P++ T +GVLSA
Sbjct: 442 IDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSA 501
Query: 509 CVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C +GLV+EG + F M + +G+ P+ +HYTC+VDLLGR+GHL EAEE IKDMP E D+V
Sbjct: 502 CGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSV 561
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
+W +LL AC N+E+GER A ++F LD + YV+LSN+YA +GKW +R+ +
Sbjct: 562 LWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMK 621
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
V K PGCSWIE+ S+++ F D +P N I++TL
Sbjct: 622 DRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLR 661
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 232/731 (31%), Positives = 372/731 (50%), Gaps = 130/731 (17%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR L D+ +VSW+ ++ GY++ +L MH VK NE TFS++L C+
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ L GKQ+H +V+ SG+E FV + L+ YA C E ++KR+
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL--------------- 214
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
F ++P+++VV W L S Y + D C +A+ LF M SG P
Sbjct: 215 ----------------FDEIPERNVVSWNALFSCYVQX-DFCGEAVGLFYEMVLSGIK-P 256
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
NE++ S++ AC L GK++HG LIK G+++D AL++ Y A+ V+
Sbjct: 257 NEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVF 316
Query: 277 DRLENPCLNASNSLING----------------------------------LISMGRI-- 300
++++ P + + N++I G +S+G +
Sbjct: 317 EKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDM 376
Query: 301 -------EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP----------- 342
EDA + FN L E + I++N++I GY+ Y + ++ LF +M
Sbjct: 377 YSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTL 436
Query: 343 ----------------------------HRSIISLNTMI------SVIPEMER------- 361
H I +N++I S + + ER
Sbjct: 437 STILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTI 496
Query: 362 -NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
+ V++ SMI+ Y Q E+AL+L++ M+ + + R S L +AC+ L + +QG+ L
Sbjct: 497 GDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQL 556
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H H++K F +++ G SLV+MY++CGSI+DA +FS ++ + +W+A++ G + HG G
Sbjct: 557 HVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHG 616
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTC 539
+A+ LF ML++ + PN T V VL AC AGLV E F SM+ +G P EHY C
Sbjct: 617 RQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYAC 676
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
++DLLGR+G ++EA E + MP E +A VWGALL A ++E+G RAA+ +F L+ +
Sbjct: 677 MIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEK 736
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNC 659
+V+L+NIYA GKW ++R+ + +VKK+PG SWIE+ +V+ F V DR++
Sbjct: 737 SGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRS 796
Query: 660 NVIYATLEHLT 670
IYA L+ L+
Sbjct: 797 QEIYAKLDELS 807
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/550 (23%), Positives = 229/550 (41%), Gaps = 109/550 (19%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E + N + + + + ++ LFD++P R VVSWN + Y + E++ L
Sbjct: 189 EGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYE 248
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M S +K NE + S++++ C L GK IH ++K GY+ F + L+ YA +
Sbjct: 249 MVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGD 308
Query: 135 IEEAKRVFDELHEDNELLWSLMLVG----------------------------------- 159
+ +A VF+++ + + + W+ ++ G
Sbjct: 309 LADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLF 368
Query: 160 --------YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
Y +C+L+ DA F +P+KD++ W +ISGY++ + E AL LF M +
Sbjct: 369 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDME-ALSLFVEMHKE 427
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G N+ T +++++ A L + VHGL +K GF D + +LI+ Y C +
Sbjct: 428 GIGF-NQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVED 486
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-----------------AN 314
A R+++ L + S+I G+ E+A +F + + AN
Sbjct: 487 AERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACAN 546
Query: 315 SISY----------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
++ NS++ YA G +DD+ R F ++ R I+S
Sbjct: 547 LSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVS---- 602
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
W++MI G Q+ +ALQL+ M K + T + AC+ G
Sbjct: 603 -------------WSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAG 649
Query: 413 SLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAW 467
+ + +L + + P + + ++D+ R G IN+A + + N + W
Sbjct: 650 LVTEAKLYFESMEELFGFKPMQEHY---ACMIDLLGRAGKINEAVELVNKMPFEANASVW 706
Query: 468 TALMNGYSHH 477
AL+ H
Sbjct: 707 GALLGAARIH 716
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 132/555 (23%), Positives = 248/555 (44%), Gaps = 83/555 (14%)
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
++ ++++ + + N ++S +LS C SL G QIH + KSG + + L+
Sbjct: 39 QTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLI 98
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
Y+ C A+++ DE E D+V W+
Sbjct: 99 NLYSKCRXFGYARKLVDESSE-------------------------------PDLVSWSA 127
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
LISGYA++ G AL F M G NE+TF SV++AC+ + GK VHG+++
Sbjct: 128 LISGYAQNGLG-GGALMAFHEMHLLGVKC-NEFTFSSVLKACSIVKDLRIGKQVHGVVVV 185
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
GFE D + L+ Y C+ F + R++D + + + N+L + + +A +
Sbjct: 186 SGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGL 245
Query: 307 FNRLT----EANSISYNSMI----------KGYAVYGQVDDSKRLFEKMPHRSII----- 347
F + + N S +SM+ +G ++G + ++ +++
Sbjct: 246 FYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAK 305
Query: 348 --SLNTMISVIPEMER-NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
L ISV ++++ + V+WN++I+G V + HE+AL+L M++
Sbjct: 306 VGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR------------- 352
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
LH+ L+K ES+++V LVDMYS+C + DA+ +F+ + ++
Sbjct: 353 --------------QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDL 398
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
AW A+++GYS + EA+ LF M ++ I N T +L + +V+ ++
Sbjct: 399 IAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGL 458
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
G + ++D G+ H+ +AE ++ I D V + ++++A + E
Sbjct: 459 SVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIG-DLVSFTSMITAYAQYGQGEE 517
Query: 585 GERAAQKMFGLDKKP 599
+ +M ++ KP
Sbjct: 518 ALKLFLEMQDMELKP 532
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 16/266 (6%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I N I G+ + A +F++ I +VS+ +M+ Y+++ + +E+L L M
Sbjct: 468 IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQD 527
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+K + S++L+ CA L++ GKQ+H +LK G+ F G+ L+ YA C I++
Sbjct: 528 MELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDD 587
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV-WTKLIS--GYAKS 194
A R F EL E + WS M+ G Q A +F +M K+ V L+S G
Sbjct: 588 AGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNH 647
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+A F M E P + + +I R G E L+ K FE + S
Sbjct: 648 AGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAV---ELVNKMPFEANAS 704
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLE 280
+ GAL+ GA R++ +E
Sbjct: 705 VWGALL----------GAARIHKDVE 720
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/660 (32%), Positives = 354/660 (53%), Gaps = 55/660 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A +F+ +P R +++W +M+ G ++ +F ++ +L M V+ ++ F ++L
Sbjct: 254 GGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLL 313
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C +L GK++H + + G + +VG+ LL Y C +E+A VF+ + N +
Sbjct: 314 KACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVV 373
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ G+ Q M +AF F KM ES
Sbjct: 374 SWTAMIAGFAQHGRMEEAFLFFNKMI--------------------------------ES 401
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PN TF S++ AC+R A +G+ +H +IK G+ D+ + AL+ Y C +
Sbjct: 402 GIE-PNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMD 460
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAV 327
A V++R+ + A N++I + + ++A F L + +S ++ S++
Sbjct: 461 ARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKS 520
Query: 328 YGQVDDSKRL--------FEKMPH--RSIIS-------LNTMISVIPEM-ERNPVTWNSM 369
++ K + FE H +++S L + +++ +M ER+ V+WN++
Sbjct: 521 PDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTI 580
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
I+G+VQ+ ++ A + M++ + + TF+ L +AC+ +L +G+ LHA + +
Sbjct: 581 IAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAAL 640
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ +V VGT L+ MY++CGSI+DA F ++ NV +WT+++ GY+ HG G EA+ LF
Sbjct: 641 DCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQ 700
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
M ++ + P+ TFVG LSAC AGL+ EG+ F SMK + + P +EHY C+VDL GR+G
Sbjct: 701 MQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEPRMEHYGCMVDLFGRAGL 760
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
LHEA EFI M ++ D+ +WGALL AC +++E+ E+ AQK LD YVILSNI
Sbjct: 761 LHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNI 820
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
YA G W + +RK + V K PG SWIE++ RVH F +D+ +P I+A L L
Sbjct: 821 YAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRL 880
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/576 (23%), Positives = 285/576 (49%), Gaps = 56/576 (9%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ + G +A+ +FD+MP + V SWN +L GY + +++E+ L M + VK
Sbjct: 143 NMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVK 202
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ TF +L+ CA ++ G ++ L+L +G++ FVG+ L+ + C +++A +V
Sbjct: 203 PDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKV 262
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F+ L P++D++ WT +I+G A+ ++A
Sbjct: 263 FNNL-------------------------------PRRDLITWTSMITGLARHRQ-FKQA 290
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
LF+ M E G P++ F S+++AC A +GK VH + + G + + +G AL+
Sbjct: 291 CNLFQVMEEEGVQ-PDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLS 349
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSIS 317
Y C + + A+ V++ ++ + + ++I G GR+E+A L FN++ E+ N ++
Sbjct: 350 MYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVT 409
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ 359
+ S++ + + +++ +++ I+ + + + + M
Sbjct: 410 FMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS 469
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
++N V WN+MI+ YVQ+ ++ A+ + + K I STF+ + + C +L+ G+
Sbjct: 470 KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKW 529
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+ + +++ FES++++ +LV M+ CG + A F+ + ++ +W ++ G+ HG
Sbjct: 530 VQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGE 589
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
A F++M E + P+ TF G+L+AC + EG ++ + + + T
Sbjct: 590 NQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTG 649
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ + + G + +A ++P + + W ++++
Sbjct: 650 LISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITG 684
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/552 (25%), Positives = 259/552 (46%), Gaps = 56/552 (10%)
Query: 46 IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQ 105
I+ N L SK + E++ ++ ++ +++++ T+S++L +C + +L DG++
Sbjct: 66 IKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGER 125
Query: 106 IHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNL 165
IH + S + F+ + L+ YA C AK++FDE+ + + W+L+L GYVQ
Sbjct: 126 IHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRR 185
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
+AF + +M + DG + P++YTF ++
Sbjct: 186 YEEAFRLHEQMVQ-----------------DGVK----------------PDKYTFVYML 212
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
ACA +G + L++ G++ D +G ALI + C D A++V++ L L
Sbjct: 213 NACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLI 272
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
S+I GL + + A +F + E + +++ S++K ++ KR+ +M
Sbjct: 273 TWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARM 332
Query: 342 PHRSI-------ISLNTMISVIPEME-----------RNPVTWNSMISGYVQNNLHEKAL 383
+ +L +M + ME RN V+W +MI+G+ Q+ E+A
Sbjct: 333 KEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAF 392
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+ M + I+ R TF + ACS +L+QG+ +H ++K + ++ V T+L+ MY
Sbjct: 393 LFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMY 452
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++CGS+ DA+ F IS NV AW A++ Y H AV F+ +L++ I P+++TF
Sbjct: 453 AKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFT 512
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
+L+ C + G + + G L +V + G L A DMP E
Sbjct: 513 SILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-E 571
Query: 564 LDAVVWGALLSA 575
D V W +++
Sbjct: 572 RDLVSWNTIIAG 583
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/530 (24%), Positives = 233/530 (43%), Gaps = 62/530 (11%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
T+CG + A +F+ + R VVSW M+ G+++ + +E+ + M S ++ N
Sbjct: 352 TKCG---SMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRV 408
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TF +IL C++ ++L G+QIH ++K+GY + V + LL YA C + +A+ VF+ +
Sbjct: 409 TFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERI 468
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ N + W+ M+ YVQ +A F + K+ +
Sbjct: 469 SKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGI------------------------ 504
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
P+ TF S++ C A GK V L+I+ GFE D I AL+ +
Sbjct: 505 ---------KPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVN 555
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSM 321
C AM +++ + L + N++I G + G + A F + E+ + I++ +
Sbjct: 556 CGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGL 615
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRS----------IISLNTMISVIPEM--------ERNP 363
+ A + + +RL + + +IS+ T I + ++N
Sbjct: 616 LNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNV 675
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
+W SMI+GY Q+ ++AL+L+ M++ + TF AC+ G +++G
Sbjct: 676 YSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFES 735
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSE 482
+ E + +VD++ R G +++A + + P+ W AL+ H
Sbjct: 736 MKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVEL 795
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSAC-VRAGLVNEGMKIFRSMKSYGVV 531
A + + LE D PN +LS AG+ E K+ + M GVV
Sbjct: 796 AEKVAQKKLELD--PNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVV 843
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 200/452 (44%), Gaps = 69/452 (15%)
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T+ S+++ C + +G+ +H + + D + LI Y C + A +++D +
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 280 ENPCLNASNSLINGLISMGRIEDA------------------------------------ 303
+ + + N L+ G + R E+A
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGG 225
Query: 304 ---ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
LI N + + ++I + G VDD+ ++F +P R +I
Sbjct: 226 ELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLI------------- 272
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
TW SMI+G ++ ++A L+ M + + + F L AC+ +L+QG+ +
Sbjct: 273 ----TWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRV 328
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA + + ++ +YVGT+L+ MY++CGS+ DA F+ + NV +WTA++ G++ HG
Sbjct: 329 HARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRM 388
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
EA L F M+E I PN TF+ +L AC R + +G +I + G + T +
Sbjct: 389 EEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTAL 448
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
+ + + G L +A + + + + V W A+++A ++ E + A L K+ I
Sbjct: 449 LSMYAKCGSLMDARNVFERISKQ-NVVAWNAMITA---YVQHEKYDNAVATFQALLKEGI 504
Query: 601 ----SAYVILSNIYAV-----LGKWGKKMDIR 623
S + + N+ LGKW + + IR
Sbjct: 505 KPDSSTFTSILNVCKSPDALELGKWVQSLIIR 536
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
GS + Q + + N A +N S G SEA+L+ + I + T+ +L
Sbjct: 53 GSYSKGQGN-EFVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLL 111
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
C++ + +G +I +K + P + + ++ + + G+ + A++ +MP + D
Sbjct: 112 QLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMP-DKDV 170
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
W LL E R ++M KP
Sbjct: 171 YSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKP 203
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/735 (31%), Positives = 369/735 (50%), Gaps = 110/735 (14%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N + G + A+ LFD MP R VVSWN+++ GY + + + M R
Sbjct: 109 VSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRM 168
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ TTF+ +L C+ L G QIH L +K G++C GS LL YA C +++
Sbjct: 169 GTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLD-- 226
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
C++ F MP+K+ V W+ +I+G ++ D
Sbjct: 227 ------------------------CSI-----QFFHSMPEKNWVSWSAIIAGCVQN-DDL 256
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
L+LF+ M+++G + ++ TF SV R+CA L A G +HG +K F D IG A
Sbjct: 257 RGGLELFKEMQKAGVGV-SQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTA 315
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI--------------------------- 291
++ Y C A ++++ L N L + N++I
Sbjct: 316 TLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVI 375
Query: 292 -------------------------NGLISM----GRIEDAELIFNRLTEANSISYNSMI 322
N ++ M G + +A L+F + +++S+N++I
Sbjct: 376 KGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAII 435
Query: 323 KGYAVYGQVDDSKRLF-EKMPHRSIISLNTMISV-IPEM------------------ERN 362
+ G + + LF +S + L++ + + + +M E+
Sbjct: 436 AAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT 495
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
V+WN++ISG+ E+A + + M ++ +D T++ + C+ L +++ G+ +HA
Sbjct: 496 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA 555
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
++K +S+ Y+ ++LVDMYS+CG++ D Q F + + W A++ GY+ HGLG E
Sbjct: 556 QIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEE 615
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVV 541
A+ +FE M +++ PN ATF+ VL AC GLV +G+ F SM S YG+ P LEHY+CVV
Sbjct: 616 ALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVV 675
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
D++GRSG + +A E I+ MP E DAV+W LLS C N+EV E+AA + L+ + +
Sbjct: 676 DIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSA 735
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNV 661
AYV+LSNIYA G W + +RK + +KK+PGCSWIE+ S VHAF V D+ +P
Sbjct: 736 AYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKE 795
Query: 662 IYATLEHLTANLNSV 676
IY L+ LT + V
Sbjct: 796 IYENLDVLTDEMKWV 810
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 276/652 (42%), Gaps = 106/652 (16%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
T+R+LF PIR ++ SK +S S+ + K + TFS I C+
Sbjct: 5 TSRHLF---PIRFFFNFQ------SKSPFKTLPISPFSSYQATPTK--KKTFSHIFQECS 53
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+L GKQ H ++ + ++ FV + L+ Y C ++E A +VFD + + + + W+
Sbjct: 54 DRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNA 113
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
ML GY + A +F MP++DVV W LISGY + D K + +F M G +
Sbjct: 114 MLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDH-RKVIDVFLQMGRMG-TV 171
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+ TF V+++C+ L G +HGL +K GF+ D G AL++ Y C+ D +++
Sbjct: 172 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQF 231
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-------------------NSI 316
+ + + +++I G + + +F + +A +++
Sbjct: 232 FHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSAL 291
Query: 317 SYNSMIKGYAV---YG-----------------QVDDSKRLFEKMPHRSIISLNTMISVI 356
S + G+A+ +G + D+++LF +P+ ++ S N +I
Sbjct: 292 RLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGY 351
Query: 357 PEMERNPVTWNSMISG------YVQNNLHEKALQLY-MTMRKL---------AIDRTRST 400
++ +SG ++ +L + LQ++ ++M+ L AI
Sbjct: 352 ARSDKGLGLDEVSLSGAFRACAVIKGDL--EGLQVHGLSMKSLCQSNICVANAILDMYGK 409
Query: 401 FSVLFHACSCLGSL----------------QQGQ-------LLHAHLVKTPFESNVYVGT 437
L AC + Q G +H ++K+ + +VG
Sbjct: 410 CGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGI 469
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+L+DMYS+CG + A+ ++ V +W A+++G+S EA F MLE + P
Sbjct: 470 ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 529
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
+ T+ +L C V G +I + + + +VD+ + G++ + +
Sbjct: 530 DNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIF 589
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
+ P D V W A++ C + AQ G + I Y+ L N+
Sbjct: 590 EKAP-NRDFVTWNAMV--CGY----------AQHGLGEEALKIFEYMQLENV 628
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/663 (31%), Positives = 350/663 (52%), Gaps = 56/663 (8%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A LF MP + VSWN +L GY++ + L L M K ++ T ST+L CA
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
SL +GK +H L L+SG E EF+G L+ Y+
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYS-------------------------- 97
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+C + DA VF K+ DVV W+ +I+G + G ++A +LF MR G P
Sbjct: 98 -----KCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHG-QEAAELFHLMRRKGAR-P 150
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
N++T S++ +G G+ +HG + K GFE D + LI Y + +V+
Sbjct: 151 NQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVF 210
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIK--------- 323
+ + NP L + N+L++G IF ++ + N ++ S+++
Sbjct: 211 EAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPE 270
Query: 324 -GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE--------MERNPVTWNSMISGYV 374
G V+ + + + +++ + + + + R+ +W +ISGY
Sbjct: 271 FGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYA 330
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
Q + EKA++ + M++ I T + CS + +L+ G+ LHA VK +++
Sbjct: 331 QTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIF 390
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
VG++LVD+Y +CG + A+A F + S ++ +W +++GYS HG G +A+ F +ML +
Sbjct: 391 VGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEG 450
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
I+P+ ATF+GVLSAC GLV EG K F SM K YG+ P++EHY C+VD+LGR+G +E
Sbjct: 451 IMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEV 510
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
+ FI++M + +++W +L AC N++ GE+AA+K+F ++ S+Y++LSNI+A
Sbjct: 511 KIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASK 570
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
G+W +IR +T +KK+PGCSW+E++ +VH F +D ++P IYA L+ L +L
Sbjct: 571 GRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSL 630
Query: 674 NSV 676
S+
Sbjct: 631 MSI 633
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 199/471 (42%), Gaps = 57/471 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A +F ++ VV+W+ M+ G + E+ L M R + N+ T S+++
Sbjct: 100 GTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLV 159
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S + L G+ IH + K G+E V + L+ Y +E+ +VF+
Sbjct: 160 STATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFE-------- 211
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
M D+V W L+SG+ S C + ++F M
Sbjct: 212 -----------------------AMTNPDLVSWNALLSGFYDS-QTCGRGPRIFYQMLLE 247
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PN +TF SV+R+C+ L GK VH +IK + D+ +G AL++ Y +
Sbjct: 248 GFK-PNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLED 306
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAV 327
A +DRL N + + +I+G + E A F ++ + N + S + G +
Sbjct: 307 AGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSH 366
Query: 328 YGQVDDSKRLFE---KMPH-------RSIISLNTMISVIPEME--------RNPVTWNSM 369
+++ ++L K H +++ L + E R+ V+WN++
Sbjct: 367 MATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTI 426
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-P 428
ISGY Q+ EKAL+ + M I +TF + ACS +G +++G+ + K
Sbjct: 427 ISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYG 486
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
++ +VD+ R G N+ + ++ +P W ++ HG
Sbjct: 487 INPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHG 537
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G + A +F + R +VSWNT++ GYS+ + +++L M + +E TF
Sbjct: 400 GKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFI 459
Query: 89 TILSVCAQLNSLIDGKQ 105
+LS C+ + + +GK+
Sbjct: 460 GVLSACSFMGLVEEGKK 476
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 226/736 (30%), Positives = 371/736 (50%), Gaps = 118/736 (16%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLC----- 57
L + + T + E+ I TN+ + + ++GQ+ AR LFD+MP + SWNTM+
Sbjct: 51 LRSIHTTTAASYES-IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNV 109
Query: 58 --------------------------GYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
GY K+ E+ L +M K ++ T ++L
Sbjct: 110 GRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVL 169
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
VC+ L + G+ IH V+K+G+E FV +GL+ YA C + EA+ +F L D
Sbjct: 170 RVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFD--- 226
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+K+ V+WT +++GYA++ DG KA++ FR+M
Sbjct: 227 --------------------------RKNHVLWTAMVTGYAQNGDG-YKAVEFFRYMHAQ 259
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G N+YTF +++ AC+ + A C G+ VHG ++K GF + + AL++ Y C
Sbjct: 260 GVEC-NQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKN 318
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----------------- 314
A + + +E+ + + NSL+ G + G E+A +F + N
Sbjct: 319 AKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVV 378
Query: 315 --------------------SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
+ N+++ YA G +D + +FEKM
Sbjct: 379 GSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKM------------- 425
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+E++ ++W S+++GY QNN HE++L+++ MR ++ + + + AC+ L L
Sbjct: 426 ----LEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLL 481
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ G+ +H +K+ + V SLV MY++CG ++DA A F S+ +V WTA++ GY
Sbjct: 482 EFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGY 541
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPT 533
+ +G G ++ ++ M+ P+ TF+G+L AC AGLV+EG K F+ M K YG+ P
Sbjct: 542 AQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPG 601
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
EHY C++DL GRSG L EA++ + M ++ DA VW +LLSAC N+E+ ERAA +F
Sbjct: 602 PEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLF 661
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
L+ YV+LSN+Y+ KW IRK + + K+PGCSW+E+NSRV+ F +D
Sbjct: 662 ELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDD 721
Query: 654 RNNPNCNVIYATLEHL 669
R +P IY ++ +
Sbjct: 722 RGHPREAEIYTKIDEI 737
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/690 (32%), Positives = 344/690 (49%), Gaps = 98/690 (14%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
V T + ++ C Q F Q IR V W + GY K ++++L L M R
Sbjct: 61 VKTTREVSACANQTQ-------FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQR 113
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + ++ F +++ C + L G+++H ++ G+E VG+ L Y C +E
Sbjct: 114 TGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLEN 173
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++ VF +MPK+DVV W +I+GY+++
Sbjct: 174 ARQ-------------------------------VFDRMPKRDVVSWNAIIAGYSQNGQP 202
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E AL LF M+ +G PN T SV+ CA L A +GK +H I+ G E D +
Sbjct: 203 YE-ALALFSEMQVNGIK-PNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVN 260
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT------ 311
L+ Y C + A ++++R+ + + N++I G + +A FNR+
Sbjct: 261 GLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKP 320
Query: 312 ---------------------------------EANSISYNSMIKGYAVYGQVDDSKRLF 338
E+N + N+++ YA G V+ + +LF
Sbjct: 321 NSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLF 380
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
E+MP ++N V WN++ISGY Q+ +AL L++ M+ I
Sbjct: 381 ERMP-----------------KKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDS 423
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
+ AC+ +L+QG+ +H + +++ FESNV VGT LVD+Y++CG++N AQ F
Sbjct: 424 FAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFER 483
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ +V +WT ++ Y HG G +A+ LF M E + F +L+AC AGLV++G
Sbjct: 484 MPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQG 543
Query: 519 MKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
++ F+ MKS YG+ P LEHY C+VDLLGR+GHL EA IK+M +E DA VWGALL AC
Sbjct: 544 LQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACR 603
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
N+E+GE+AA+ +F LD YV+LSNIYA +W +RK + VKK PGC
Sbjct: 604 IHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGC 663
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
S + ++ V F V DR +P IYA LE
Sbjct: 664 SVVAVHRDVQTFLVGDRTHPQSEQIYAMLE 693
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/653 (32%), Positives = 356/653 (54%), Gaps = 63/653 (9%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
L+ + F+ +L C + S ID ++IH ++K+ + F+ + L+ Y C E+A++V
Sbjct: 17 LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD + + N ++ +L + + +AF+VF MP+ D W ++SG+A+ D E+A
Sbjct: 77 FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQH-DRFEEA 135
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
L+ F M S + + NEY+F S + ACA L G +H L+ K + D +G AL++
Sbjct: 136 LRFFVDM-HSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVD 194
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----------NRLT 311
Y C A R +D + + + NSLI G A +F + +T
Sbjct: 195 MYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEIT 254
Query: 312 EANSISY------------------------------NSMIKGYAVYGQVDDSKRLFEKM 341
A+ +S N+++ YA +V++++ +F++M
Sbjct: 255 LASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314
Query: 342 PHRSIISLNTMISVIPE--------------MERNPVTWNSMISGYVQNNLHEKALQLYM 387
P R+++S +M+ ME+N V+WN++I+GY QN +E+A++L++
Sbjct: 315 PLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFL 374
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF------ESNVYVGTSLVD 441
+++ +I T TF L +AC+ L L+ G+ H ++K F ES+++VG SL+D
Sbjct: 375 LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLID 434
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY +CG + D F + +V +W A++ GY+ +G G+ A+ +F ML P+ T
Sbjct: 435 MYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVT 494
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
+GVLSAC AGLV EG + F SM++ G+ P +H+TC+VDLLGR+G L EA + I+ M
Sbjct: 495 MIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTM 554
Query: 561 PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKM 620
P++ D VVWG+LL+AC N+E+G+ A+K+ +D YV+LSN+YA LG+W +
Sbjct: 555 PMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVV 614
Query: 621 DIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+RK++ V K PGCSWIE+ SRVH F V+D+ +P I+ L+ LT +
Sbjct: 615 RVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQM 667
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 148/344 (43%), Gaps = 50/344 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS + R + AR +F M + VVSWN ++ GY++ + +E++ L + R
Sbjct: 319 VVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKR 378
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY------ECFEFVGSGLLFFYAN 131
++ TF +L+ CA L L G+Q H +LK G+ E FVG+ L+ Y
Sbjct: 379 ESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMK 438
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C +E+ VF+ + E + + W+ M+VGY Q +GY
Sbjct: 439 CGMVEDGCLVFERMVERDVVSWNAMIVGYAQ--------------------------NGY 472
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFE 250
+ AL++FR M SG+ P+ T V+ AC+ G EG + H + + G
Sbjct: 473 GTN------ALEIFRKMLVSGQK-PDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLA 525
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM----GRIEDAELI 306
+ +++ D A D ++ + N + L++ G IE + +
Sbjct: 526 PMKDHFTCMVDLLGRAGCLDEA---NDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYV 582
Query: 307 FNRLTEA---NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
+L E NS Y + YA G+ D R+ ++M R +I
Sbjct: 583 AEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVI 626
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/625 (33%), Positives = 338/625 (54%), Gaps = 53/625 (8%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N + ++G L AR+LF++MPI+ VS+ TM+ G ++ + E++ + M +
Sbjct: 119 VSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFA 178
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
V NE T ++++S + + +++ + +H L K G E V + L+ Y C + A
Sbjct: 179 GVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNA 238
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +FDE+ E N + W++ML GY + L+ A D+F ++P KDVV W +I GY + ++
Sbjct: 239 RVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQ-IERL 297
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+AL+++R M +G PNE +I AC R A EG+ HG++++ GF+ + I
Sbjct: 298 GEALRMYRSMLRTGVG-PNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQAT 356
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
+I FY C G I A L F ++ + S+
Sbjct: 357 IIHFYAAC-------------------------------GEINLAFLQFELGSKDHVSSW 385
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N++I G+ G ++ +++LF++MP R + S W+SMISGY QN
Sbjct: 386 NALISGFVRNGMIEQARQLFDEMPERDVFS-----------------WSSMISGYSQNEQ 428
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+ ALQL+ M + T +F A + LG+L +G+ H +++ N + +
Sbjct: 429 PDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAA 488
Query: 439 LVDMYSRCGSINDAQASFSSISS--PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
L+DMY++CGSI A F I +V+ W A++ G + HG + ++ LF + I
Sbjct: 489 LIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIK 548
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
PN+ TF+GVLSAC AGLV+ G K F+ MK+ Y + P ++HY C++DLLGR+G L EA E
Sbjct: 549 PNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAE 608
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
I+ MP++ D V+WG LL+AC N+E+GERAA+ + LD + V+LSNIYA G+
Sbjct: 609 MIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGR 668
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWI 640
W +R+ + +KK PGCS +
Sbjct: 669 WDDAFLVRRAMQSQRMKKSPGCSGV 693
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 236/494 (47%), Gaps = 59/494 (11%)
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
E T + L C+ L +L G+QIH LV KSG FV + L+ FY C I A+ +FD
Sbjct: 52 ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFD 111
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKAL 202
+ + ++ML GYV+ + +A +F KMP K V +T ++ G A+ + C +A+
Sbjct: 112 TCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQ--NNCWLEAI 169
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
+F+ MR +G +PNE T SVI A + +G +++H L K G E + L+
Sbjct: 170 GVFKDMRFAGV-IPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHM 228
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI 322
YC C + + +A ++F+ + E N +++N M+
Sbjct: 229 YCVCSS-------------------------------LGNARVLFDEIPERNVVTWNVML 257
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
GY+ G VD ++ LFE++P + ++S W ++I GYVQ +A
Sbjct: 258 NGYSKSGLVDLARDLFERIPAKDVVS-----------------WGTIIDGYVQIERLGEA 300
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L++Y +M + + L AC ++ +GQ H +V+T F+ ++ +++
Sbjct: 301 LRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHF 360
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
Y+ CG IN A F S +V++W AL++G+ +G+ +A LF+ M E+D+ ++
Sbjct: 361 YAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVF----SW 416
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE---AEEFIKD 559
++S + + +++F M + GV P V + G L E A E+I
Sbjct: 417 SSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILS 476
Query: 560 MPIELDAVVWGALL 573
I L+ + AL+
Sbjct: 477 NSIPLNDNLNAALI 490
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 230/445 (51%), Gaps = 26/445 (5%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +V+ N + ++G + AR+LF+++P + VVSW T++ GY + + E+L + +
Sbjct: 247 ERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRS 306
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M R+ V NE ++S C + ++ +G+Q H +++++G++C++F+ + ++ FYA C E
Sbjct: 307 MLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGE 366
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I A F+ +D+ W+ ++ G+V+ ++ A +F +MP++DV W+ +ISGY+++
Sbjct: 367 INLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQN 426
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ + AL+LF M G PNE T SV A A LG EG+ H ++ +++
Sbjct: 427 -EQPDLALQLFHEMVAGGVQ-PNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDN 484
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRLT- 311
+ ALI+ Y C + A++++ +++ + S N++I GL G + +F++L
Sbjct: 485 LNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQR 544
Query: 312 ---EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
+ NSI++ ++ G VD ++ F+ M + + +E N +
Sbjct: 545 VRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKN------------LYNIEPNIKHYGC 592
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
MI + ++A ++ +RK+ + + L AC G+++ G+ +L K
Sbjct: 593 MIDLLGRAGRLKEAAEM---IRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLD 649
Query: 429 FESNVYVGTSLV-DMYSRCGSINDA 452
G L+ ++Y+ G +DA
Sbjct: 650 ISHG--AGRVLLSNIYADAGRWDDA 672
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 222/685 (32%), Positives = 353/685 (51%), Gaps = 83/685 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL-------- 69
+V N I+ + G L AR LFD+MP +SW ++ G+ K+ + ES+
Sbjct: 87 LVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPF 146
Query: 70 -----------------------SLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
L + S VK N+ TF++++ CA L G +
Sbjct: 147 QNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSV 206
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
L++K+GYE V + L+ EI A+ VFD + E + + W+ +L YV+ + +
Sbjct: 207 LGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDEL 266
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
+A +F +MP+++ V W+ +I+ Y +S E++L+LF M + G PN F S++
Sbjct: 267 GEARRIFDEMPQRNEVSWSAMIARYCQS-GYPEESLRLFCRMIQEGFK-PNISCFSSILS 324
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
A A + A G +HG + K GFE D + +LI+ YC C
Sbjct: 325 ALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKC-------------------- 364
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
G +D +F+ + E N +S+N+M+ GY++ G ++++K LF MP
Sbjct: 365 -----------GETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMP---- 409
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
RN V+W+++I+G++ ++ +++ M L +STFS L
Sbjct: 410 -------------VRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLC 456
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
AC+ SL +G+ LH +VK + + YVGT+L DMY++ G I ++ F+ + N +
Sbjct: 457 ACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVS 516
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLE-QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
WTA++ G + GL E++ LFE M + I PN F+ VL AC +GLV++G+ F SM
Sbjct: 517 WTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSM 576
Query: 526 KS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
++ YG+ P H+TCVVD+L R+G L EAEEFI MP + + W ALLS C + N E+
Sbjct: 577 EAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEEL 636
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
ER A K++ + +K + YV+LSNIYA G+W + +RK + +KK GCSW+E+
Sbjct: 637 AERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCSWVEIRD 696
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHL 669
RVH+F ED + IY LE L
Sbjct: 697 RVHSFYSEDGAHSQSAEIYEILELL 721
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 171/392 (43%), Gaps = 49/392 (12%)
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
S+++ G +G +H L K G ++ I L+ Y A ++ +
Sbjct: 26 SLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGF 85
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
L N +I+ + G +++A +F+ + + N IS+ ++I G+ YG+V +S FE+ P
Sbjct: 86 DLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNP 145
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
++++S W + ISGYVQN +A++L++ + + + + TF+
Sbjct: 146 FQNVVS-----------------WTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFT 188
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ AC+ LG G + +VKT +E ++ V SL+ + R G I+ A+ F +
Sbjct: 189 SVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEK 248
Query: 463 NVAAWTALMN-------------------------------GYSHHGLGSEAVLLFEIML 491
+V +WTA+++ Y G E++ LF M+
Sbjct: 249 DVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMI 308
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
++ PN + F +LSA + GM I + G + + ++D+ + G
Sbjct: 309 QEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETK 368
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
+ F+ D +E + V W A++ +ME
Sbjct: 369 DG-RFLFDTILEKNMVSWNAMVGGYSLNGHME 399
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/692 (31%), Positives = 368/692 (53%), Gaps = 63/692 (9%)
Query: 1 MKLYATQSQTLMTQETLI------VSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSW 52
+ LY T S L T L V+ ++ G+L + FD +P+ R V
Sbjct: 67 LHLY-TLSPDLATPAVLFRADPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLH 125
Query: 53 NTMLCGYSKWAKFDESLSLVSTMHRSN--VKLNETTFSTILSVCAQLNSLIDGK--QIHC 108
N M+ +++ + ++S+ ++ S+ ++ ++ +F+++LS Q++ L Q+HC
Sbjct: 126 NAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHC 185
Query: 109 LVLKSGYECFEFVGSGLLFFYANCFE---IEEAKRVFDELHEDNELLWSLMLVGYVQCNL 165
V K G V + L+ Y C +A++V DE+ E +EL W+ ++VG+V+
Sbjct: 186 AVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGD 245
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
+ A F ++ + VVW +ISGY +S C +A +LFR M S P+E+TF S++
Sbjct: 246 VHAARSAFEEIDGEFDVVWNAMISGYVQS-GMCAEAFELFRRM-VSKRIPPDEFTFTSLL 303
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
ACA G F GK VHG I+ +F + L
Sbjct: 304 SACANAGFFLHGKSVHGQFIRLQPDF---------------------------VPEAALP 336
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
+N+L+ G+I A IF+ +T + +S+N+++ GY G +D++ R+F++MP++S
Sbjct: 337 VNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKS 396
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
+S W M+SGYV L E AL+L+ MR + T++
Sbjct: 397 ELS-----------------WMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAV 439
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
AC LG+L+ G+ LHAHLV+ FE++ G +L+ MY+RCG++ DA+ F + + +
Sbjct: 440 AACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSV 499
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
+W A+++ HG G EA+ LF+ M+ Q I P+ +F+ +L+AC AGLV++G + F SM
Sbjct: 500 SWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESM 559
Query: 526 -KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
+ +G+ P +HY ++DLLGR+G + EA + IK MP E +W A+LS C +ME+
Sbjct: 560 ERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMEL 619
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
G AA ++F + + Y++LSN Y+ G+W +RK + VKK+PGCSWIE+ +
Sbjct: 620 GAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGN 679
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+VH F V D +P+ + +Y LE + A + +
Sbjct: 680 KVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKL 711
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 227/693 (32%), Positives = 359/693 (51%), Gaps = 94/693 (13%)
Query: 7 QSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD 66
++ + + + IV N AIT RNGQ +A LF+ MP R+ +SWN M+ G KF
Sbjct: 38 KTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFY 97
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQL---------------------NSLIDGKQ 105
+ L M ++ +++ ++S C + N+++ G
Sbjct: 98 LARQLFEKMPTRDL----VSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYA 153
Query: 106 IHCLVLKSGYECFEFVG-------SGLLFFYANCFEIEEAKRVFDELHEDNELL-WSLML 157
+ V K E F+ + +G+L Y IE+A+R+F E D EL+ W+ M+
Sbjct: 154 QNGYV-KEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF-ESKADWELISWNCMM 211
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
GYV+ N + DA +F +MP++D V W +ISGYA++ + E A +LF
Sbjct: 212 GGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLE-AQRLFE----------- 259
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
+S +R A G V +G+L D A RV+D
Sbjct: 260 ----ESPVRDVFTWTAMVSGYVQNGML-------------------------DEARRVFD 290
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRL 337
+ + N++I G + R++ A +F + N S+N+MI GYA G + ++
Sbjct: 291 GMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNF 350
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
F++MP +R+ ++W ++I+GY Q+ E+AL L++ M++
Sbjct: 351 FDRMP-----------------QRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLN 393
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
RSTF+ C+ + +L+ G+ +H +VK ES YVG +L+ MY +CG+I+DA F
Sbjct: 394 RSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFE 453
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
I V +W ++ GY+ HG G EA++LFE M + I+P+ T VGVLSAC GLV++
Sbjct: 454 GIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDK 513
Query: 518 GMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
G + F SM + YG+ +HYTC++DLLGR+G L +A+ +K+MP E DA WGALL A
Sbjct: 514 GTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGAS 573
Query: 577 WFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPG 636
N E+GE+AA+ +F ++ YV+LSN+YA G+WG +R R+ VKK PG
Sbjct: 574 RIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPG 633
Query: 637 CSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
SW+E+ +++H F+V D +P + IY LE L
Sbjct: 634 YSWVEVQNKIHTFTVGDSVHPERDRIYTFLEEL 666
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 221/669 (33%), Positives = 348/669 (52%), Gaps = 67/669 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMP--IRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
IV+ I G AR +F P IR V +N M+ GYS ++ L +
Sbjct: 81 IVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDL 140
Query: 76 HRSNVKLNETTFSTILSVCAQL-NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC-- 132
R+ + + TF+++L A + +QIHC V+KSG V + LL + C
Sbjct: 141 LRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCAS 200
Query: 133 -------FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
+ A+++FDE+ E +EL W+ M+ GYV+ + A M +K VV W
Sbjct: 201 SPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWN 260
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
+ISGY E AL++FR M G +E+T+ SV+ ACA G F GK VH ++
Sbjct: 261 AMISGYVHHGFFLE-ALEMFRKMYLLGIQW-DEFTYTSVLSACANAGFFLHGKQVHAYIL 318
Query: 246 KC----GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
+ +F S+ AL Y C G+++
Sbjct: 319 RTEPRPSLDFSLSVNNALATLYWKC-------------------------------GKVD 347
Query: 302 DAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
+A +FN++ + +S+N+++ GY G++D++K FE+MP ER
Sbjct: 348 EARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMP-----------------ER 390
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
N +TW MISG QN E++L+L+ M+ + F+ AC+ L +L G+ LH
Sbjct: 391 NLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLH 450
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
A LV+ F+S++ G +L+ MY++CG + A F ++ + +W A++ HG G+
Sbjct: 451 AQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGA 510
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCV 540
+A+ LFE+ML++DI+P+ TF+ VLS C AGLV EG + F+SM YG+ P +HY +
Sbjct: 511 QALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARM 570
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
+DLL R+G EA++ I+ MP+E +W ALL+ C NM++G +AA+++F L +
Sbjct: 571 IDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHD 630
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
YV+LSN+YA +G+W +RK + VKK+PGCSWIE+ ++VH F V+D +P
Sbjct: 631 GTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQ 690
Query: 661 VIYATLEHL 669
+Y LE L
Sbjct: 691 AVYNYLEEL 699
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 222/464 (47%), Gaps = 54/464 (11%)
Query: 78 SNVKLNETTFSTILSVCAQLN--SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+NV+ ++ L C N S + +H ++ SG++ ++ + L+ Y ++
Sbjct: 7 ANVRRLANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDL 66
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK--KDVVVWTKLISGYAK 193
A +FDE+ + + + + ++ + + A ++F P +D V + +I+GY+
Sbjct: 67 VSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSH 126
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL-GAFCEGKVVHGLLIKCGFEFD 252
+ DG A++LFR + +G P+ +TF SV+ A A + + + +H ++K G F
Sbjct: 127 NNDGF-GAIELFRDLLRNGFR-PDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFV 184
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
S+ AL+ + C + + S + A +F+ +TE
Sbjct: 185 TSVLNALLSVFVKC----------------------ASSPLVSSSSLMAAARKLFDEMTE 222
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
+ +S+ +MI GY G++D +++ + M + + V WN+MISG
Sbjct: 223 RDELSWTTMIAGYVRNGELDAARQFLDGMTEKLV-----------------VAWNAMISG 265
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT----P 428
YV + +AL+++ M L I T++ + AC+ G G+ +HA++++T
Sbjct: 266 YVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPS 325
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
+ ++ V +L +Y +CG +++A+ F+ + ++ +W A+++GY + G EA FE
Sbjct: 326 LDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFE 385
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
M E++++ T+ ++S + G E +K+F MKS G P
Sbjct: 386 EMPERNLL----TWTVMISGLAQNGFGEESLKLFNRMKSEGFEP 425
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/668 (30%), Positives = 352/668 (52%), Gaps = 56/668 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++V A +F MP + VSWN +L G+++ ++ L+L M S + ++ T ST+L
Sbjct: 278 GEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVL 337
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
CA +L G+ +H L ++ G E EF+ L+ Y+
Sbjct: 338 KGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYS--------------------- 376
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+C L DA VF+++ DVV W+ +I+ + E A ++F+ MR S
Sbjct: 377 ----------KCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAA-EVFKRMRHS 425
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G +PN++T S++ A LG G+ +H + K GFE+D ++ AL+ Y +
Sbjct: 426 GV-IPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQD 484
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAV 327
RV++ N L + N+L++G + IFN++ N ++ S+++ +
Sbjct: 485 GCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSS 544
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNSM 369
VD K++ ++ S+ + + + + +M +R+ W +
Sbjct: 545 LSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVI 604
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
++GY Q+ EKA++ ++ M++ + T + CS + +L G+ LH+ +K
Sbjct: 605 VAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ 664
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+++V ++LVDMY++CG + DA+ F + S + +W ++ GYS HG G +A+ FE
Sbjct: 665 SGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEA 724
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSG 548
ML++ VP+ TF+GVLSAC GL+ EG K F S+ K YG+ PT+EHY C+VD+LGR+G
Sbjct: 725 MLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAG 784
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
HE E FI++M + + ++W +L AC N+E GERAA K+F L+ + S Y++LSN
Sbjct: 785 KFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSN 844
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
++A G W ++R ++ VKK+PGCSW+E+N +VH F D ++P I+ L+
Sbjct: 845 MFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQD 904
Query: 669 LTANLNSV 676
L L SV
Sbjct: 905 LHQKLMSV 912
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 155/576 (26%), Positives = 259/576 (44%), Gaps = 90/576 (15%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +F ++P R VVSW ++ G+ +++L M R V+ NE T++T L C+
Sbjct: 182 ACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSM 241
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L GKQ+H +K G FVGS L+ YA C E+ A+RVF + + N + W+ +
Sbjct: 242 CLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNAL 301
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
L G+ Q M DA EK L LF M S N
Sbjct: 302 LNGFAQ---MGDA-----------------------------EKVLNLFCRMTGSEINF- 328
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+++T +V++ CA G G++VH L I+ G E DE I L++ Y C A++V+
Sbjct: 329 SKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVF 388
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRL-------------------TEANSIS 317
R+E+P + + +++I L G+ +A +F R+ T+ +
Sbjct: 389 VRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLY 448
Query: 318 Y--------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
Y N+++ Y G V D R+FE +R +IS
Sbjct: 449 YGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLIS--------- 499
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
WN+++SG+ N + L+++ M + TF + +CS L + G
Sbjct: 500 --------WNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 551
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+ +HA +VK + N +VGT+LVDMY++ + DA+ F+ + ++ AWT ++ GY+
Sbjct: 552 KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQD 611
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
G G +AV F M + + PN T LS C R ++ G ++ G +
Sbjct: 612 GQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVA 671
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ +VD+ + G + +A E + D + D V W ++
Sbjct: 672 SALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTII 706
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 133/539 (24%), Positives = 236/539 (43%), Gaps = 65/539 (12%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+S +L CA L +GK IH V+KSG + + L+ YA C A +VF E+
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
E + + W+ ++ G+V GY A+ LF
Sbjct: 191 ERDVVSWTALITGFVA--------------------------EGYGSG------AVNLFC 218
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
MR G NE+T+ + ++AC+ GK VH IK G D +G AL++ Y C
Sbjct: 219 EMRREGVE-ANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKC 277
Query: 267 EAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRLTEA----NSISYNS 320
A RV+ L P NA N+L+NG MG E +F R+T + + + ++
Sbjct: 278 GEMVLAERVF--LCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLST 335
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS------------------VIPEMER- 361
++KG A G + + ++ + R L+ IS V +E
Sbjct: 336 VLKGCANSGNL-RAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDP 394
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ V+W+++I+ Q +A +++ MR + + T + L A + LG L G+ +H
Sbjct: 395 DVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIH 454
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
A + K FE + V +LV MY + GS+ D F + ++ ++ +W AL++G+ +
Sbjct: 455 ACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCD 514
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
+ +F ML + PN TF+ +L +C V+ G ++ + + T +V
Sbjct: 515 TGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALV 574
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
D+ ++ L +AE + I+ D W +++ + GE+A + + ++ +
Sbjct: 575 DMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAG---YAQDGQGEKAVKCFIQMQREGV 629
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 139/309 (44%), Gaps = 35/309 (11%)
Query: 271 GAMRVYDRLENPC-----LNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
G +R Y + C LN ++ +I G D+ L +NS++ Y
Sbjct: 126 GRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHL------------WNSLVNVY 173
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
A G + + ++F ++P ER+ V+W ++I+G+V A+ L
Sbjct: 174 AKCGSANYACKVFGEIP-----------------ERDVVSWTALITGFVAEGYGSGAVNL 216
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ MR+ ++ T++ ACS L+ G+ +HA +K S+++VG++LVD+Y++
Sbjct: 217 FCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAK 276
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CG + A+ F + N +W AL+NG++ G + + LF M +I + T V
Sbjct: 277 CGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTV 336
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
L C +G + G + G C+VD+ + G +A + + + D
Sbjct: 337 LKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIE-DPD 395
Query: 566 AVVWGALLS 574
V W A+++
Sbjct: 396 VVSWSAIIT 404
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 33/210 (15%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
+N L A +F+++ R + +W ++ GY++ + ++++ M R VK NE T +
Sbjct: 578 AKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLA 637
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+ LS C+++ +L G+Q+H + +K+G FV S L+ YA C +E+A+ VFD L
Sbjct: 638 SSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSR 697
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ ++ GY Q G KALK F M
Sbjct: 698 DTVSWNTIICGYSQ--------------------------HGQGG------KALKAFEAM 725
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGK 238
+ G +P+E TF V+ AC+ +G EGK
Sbjct: 726 LDEG-TVPDEVTFIGVLSACSHMGLIEEGK 754
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 217/655 (33%), Positives = 353/655 (53%), Gaps = 57/655 (8%)
Query: 32 GQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNETTFS 88
G+L A FD +P R V N M+ +++ + ++S+ + S +++ ++ +F+
Sbjct: 106 GRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFT 165
Query: 89 TILSVCAQLNSLIDGK--QIHCLVLKSGYECFEFVGSGLLFFYANCFEIE---EAKRVFD 143
++S Q+++L Q+HC VLKSG V + L+ Y C E +A++V D
Sbjct: 166 ALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLD 225
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
E+ + ++L W+ M+VGYV+ ++ A VF ++ K VVW +ISGY +S C A +
Sbjct: 226 EMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQS-GMCADAFE 284
Query: 204 LFRWMRESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
LFR R E +P +E+TF SV+ ACA G F GK VHG +I+ F
Sbjct: 285 LFR--RMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNF----------- 331
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI 322
+ L +N+L+ G+I A+ IF+ + + +S+N+++
Sbjct: 332 ----------------VPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTIL 375
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
GY G +D + +F+ MP++ N ++W M+SGYV L E A
Sbjct: 376 SGYIDSGCLDKAVEVFKVMPYK-----------------NDLSWMVMVSGYVHGGLSEDA 418
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L+L+ MR + T++ AC LG+L+ G+ LHAHLV+ FE++ G +L+ M
Sbjct: 419 LKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTM 478
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
Y++CG++NDA+ F + + + +W A+++ HG G EA+ LF+ M+ + I P+ +F
Sbjct: 479 YAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISF 538
Query: 503 VGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+ +L+AC AGLV+EG F SMK +G+ P +HY ++DLLGRSG + EA + IK MP
Sbjct: 539 LTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMP 598
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
E +W A+LS C +ME G AA ++F + + Y++LSN Y+ G+W
Sbjct: 599 FEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAAR 658
Query: 622 IRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+RK + VKK+PGCSWIE+ S++H F V D +P +Y LE + A + +
Sbjct: 659 VRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKL 713
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 179/379 (47%), Gaps = 36/379 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G + AR++F+++ + V WN M+ GY + ++ L M V L+E TF++
Sbjct: 244 RRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTS 303
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSG----YECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+LS CA + GK +H +++ E V + L+ Y+ +I AKR+FD +
Sbjct: 304 VLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM 363
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG--CEKALK 203
+ + + W+ +L GY+ + A +VF MP K+ + W ++SGY V G E ALK
Sbjct: 364 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGY---VHGGLSEDALK 420
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
LF MR + P +YT+ I AC LGA G+ +H L++CGFE S G AL+ Y
Sbjct: 421 LFNQMRAE-DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMY 479
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYN 319
C A + A V+ + N + N++I+ L G +A +F+++ + + IS+
Sbjct: 480 AKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFL 539
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIIS---------------------LNTMISVIPE 358
+++ G VD+ FE M IS +I +P
Sbjct: 540 TILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMP- 598
Query: 359 MERNPVTWNSMISGYVQNN 377
E P W +++SG N
Sbjct: 599 FEPTPSIWEAILSGCRTNG 617
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 106/260 (40%), Gaps = 64/260 (24%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-- 66
Q E + N +T + G++V A+ +FD M ++ VVSWNT+L GY D
Sbjct: 328 QPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKA 387
Query: 67 -----------------------------ESLSLVSTMHRSNVKLNETTFSTILSVCAQL 97
++L L + M +VK + T++ ++ C +L
Sbjct: 388 VEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGEL 447
Query: 98 NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
+L G+Q+H +++ G+E G+ LL YA C + +A+
Sbjct: 448 GALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARL----------------- 490
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
VF+ MP D V W +IS + G E AL+LF M G + P+
Sbjct: 491 --------------VFLVMPNLDSVSWNAMISALGQHGHGRE-ALELFDQMVAEGID-PD 534
Query: 218 EYTFDSVIRACARLGAFCEG 237
+F +++ AC G EG
Sbjct: 535 RISFLTILTACNHAGLVDEG 554
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 219/656 (33%), Positives = 348/656 (53%), Gaps = 68/656 (10%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V+ N I+ N + AR +F++MP R ++SWN ML GY K + +L + M
Sbjct: 92 VTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEK 151
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+V +++ +LS AQ + + ++I +L E +GLL Y IE+A
Sbjct: 152 DV----VSWNAMLSGFAQNGFVEEARKIFDQMLVKN----EISWNGLLSAYVQNGRIEDA 203
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+R+FD + + W+ ++ GYV+ + DA +F +MP +D + W +I+GYA++
Sbjct: 204 RRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN-GLL 262
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+A +LF E +P IR A G V +G+L
Sbjct: 263 SEARRLF-------EELP--------IRDVFAWTAMVSGFVQNGML-------------- 293
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
D A R+++ + + N++I G + +IE A +F+++ N+ S+
Sbjct: 294 -----------DEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSW 342
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+M+ GYA G +D +K LF++MP R IS W +MISGY Q+
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCIS-----------------WAAMISGYAQSGQ 385
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
E+AL L++ M++ RS + +C+ + +L+ G+ LH LVK F++ G +
Sbjct: 386 SEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNA 445
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+ MY +CGSI +A F I+ ++ +W ++ GY+ HG G EA+ LFE M + I P+
Sbjct: 446 LLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPD 504
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
T VGVLSAC GLV++GM+ F SM ++YG+ +HYTC++DLLGR+G L EA +
Sbjct: 505 DVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLM 564
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
K MP DA WGALL A + E+GE+AA+K+F ++ YV+LSN+YA G+W
Sbjct: 565 KSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWR 624
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ ++R ++ VKK PG SW+E+ ++ H F+V D ++P IYA LE L L
Sbjct: 625 EVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLEL 680
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 135/523 (25%), Positives = 222/523 (42%), Gaps = 103/523 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IVS N + R +L AR+LFD+MP+R +SWN M+ GY++ E+ L +
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPI 274
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+V ++ ++S Q N ++D + + E E + ++ Y +IE+
Sbjct: 275 RDV----FAWTAMVSGFVQ-NGMLDEA---TRIFEEMPEKNEVSWNAMIAGYVQSQQIEK 326
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ +FD++ N W+ M+ GY QC + A +F +MP++D + W +ISGYA+S
Sbjct: 327 ARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQ- 385
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E+AL LF M+ G + N + +CA + A GK +HG L+K GF+ G
Sbjct: 386 SEEALHLFIKMKRDG-GILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGN 444
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL+ Y C G IE+A +F +TE + +S
Sbjct: 445 ALLAMYGKC-------------------------------GSIEEAFDVFEDITEKDIVS 473
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+N+MI GYA +G ++ LFE M
Sbjct: 474 WNTMIAGYARHGFGKEALALFESM------------------------------------ 497
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVG 436
K+ I T + ACS G + +G + ++ +N
Sbjct: 498 -------------KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHY 544
Query: 437 TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSEAV-LLFEIML 491
T ++D+ R G +++A S+ P+ A W AL+ HG LG +A +FE +
Sbjct: 545 TCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFE--M 602
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV--VP 532
E D N+ +V + + +G E ++ M+ GV VP
Sbjct: 603 EPD---NSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVP 642
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 144/289 (49%), Gaps = 32/289 (11%)
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N I+ + G+ E A +FN + ++++YN+MI GY + D ++++FEKMP R +I
Sbjct: 64 NRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLI 123
Query: 348 SLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
S N M+S + +M E++ V+WN+M+SG+ QN E+A +++ M
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM---- 179
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHA-HLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ + +++ L A +Q G++ A L + + + L+ Y R ++DA
Sbjct: 180 LVKNEISWNGLLSAY-----VQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDA 234
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
++ F + + +W ++ GY+ +GL SEA LFE + +D+ + ++S V+
Sbjct: 235 RSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVF----AWTAMVSGFVQN 290
Query: 513 GLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
G+++E +IF M V + ++ +S + +A E MP
Sbjct: 291 GMLDEATRIFEEMPEKNEVS----WNAMIAGYVQSQQIEKARELFDQMP 335
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 160/326 (49%), Gaps = 38/326 (11%)
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
CE+ A+ V++ + N++I+G +S + + A +F ++ + + IS+N M+ GY
Sbjct: 76 CES---ALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGY 132
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE--------------MERNPVTWNSMIS 371
G + ++ LF +MP + ++S N M+S + + +N ++WN ++S
Sbjct: 133 VKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLS 192
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV--KTPF 429
YVQN E A +L+ ++ + ++ C G +++ +L A + + P
Sbjct: 193 AYVQNGRIEDARRLF---------DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPV 243
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ ++ Y++ G +++A+ F + +V AWTA+++G+ +G+ EA +FE
Sbjct: 244 RDKISWNI-MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEE 302
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
M E+ N ++ +++ V++ + + ++F M S + +V + G+
Sbjct: 303 MPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSRNT----SSWNTMVTGYAQCGN 354
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSA 575
+ +A+ +MP + D + W A++S
Sbjct: 355 IDQAKILFDEMP-QRDCISWAAMISG 379
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
V WN IS Y++ E AL ++ MR+ R+ T++ + G L + A
Sbjct: 61 VKWNRKISAYMRKGQCESALSVFNGMRR----RSTVTYNAMIS-----GYLSNNKFDCAR 111
Query: 424 LV--KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
V K P + ++ ++ Y + G+++ A+A F+ + +V +W A+++G++ +G
Sbjct: 112 KVFEKMP-DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
EA +F+ ML V N ++ G+LSA V+ G + + ++F S + +V + C++
Sbjct: 171 EARKIFDQML----VKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVS----WNCLM 222
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
R L +A MP+ D + W +++
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVR-DKISWNIMITG 255
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T ++ N + G+ G + A ++F+ + + +VSWNTM+ GY++ E+L+L +
Sbjct: 437 QTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFES 496
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLID 102
M + +K ++ T +LS C+ L+D
Sbjct: 497 M-KMTIKPDDVTLVGVLSACSH-TGLVD 522
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
T +S++ + Y R G A + F+ + + + A+++GY + A +
Sbjct: 54 TIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKV 113
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
FE M ++D++ ++ +LS V+ G ++ +F M VV + ++ +
Sbjct: 114 FEKMPDRDLI----SWNVMLSGYVKNGNLSAARALFNQMPEKDVVS----WNAMLSGFAQ 165
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+G + EA + M ++ + + W LLSA
Sbjct: 166 NGFVEEARKIFDQMLVK-NEISWNGLLSA 193
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 218/668 (32%), Positives = 356/668 (53%), Gaps = 57/668 (8%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
V+ + G+L A FD +P R V N M+ +++ + ++S+ +
Sbjct: 95 VAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALL 154
Query: 77 RS-NVKLNETTFSTILSVCAQLNSLIDGK--QIHCLVLKSGYECFEFVGSGLLFFYANCF 133
S +++ ++ +F+ ++S Q+++L Q+HC VLKSG V + L+ Y C
Sbjct: 155 GSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCD 214
Query: 134 EIE---EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
E +A++V DE+ + ++L W+ M+VGYV+ ++ A VF ++ K VVW +ISG
Sbjct: 215 TPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISG 274
Query: 191 YAKSVDGCEKALKLFRWMRESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
Y +S C A +LFR R E +P +E+TF SV+ ACA G F GK VHG +I+
Sbjct: 275 YVQS-GMCADAFELFR--RMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQP 331
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
F + L +N+L+ G+I A+ IF+
Sbjct: 332 NF---------------------------VPEAALPVNNALVTLYSKGGKIVIAKRIFDT 364
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ + +S+N+++ GY G +D + +F+ MP++ N ++W M
Sbjct: 365 MNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK-----------------NDLSWMVM 407
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+SGYV L E AL+L+ MR + T++ AC LG+L+ G+ LHAHLV+ F
Sbjct: 408 VSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGF 467
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
E++ G +L+ MY++CG++NDA+ F + + + +W A+++ HG G EA+ LF+
Sbjct: 468 EASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQ 527
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSG 548
M+ + I P+ +F+ +L+AC AGLV+EG F SMK +G+ P +HY ++DLLGRSG
Sbjct: 528 MVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSG 587
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
+ EA + IK MP E +W A+LS C +ME G AA ++F + + Y++LSN
Sbjct: 588 RIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSN 647
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
Y+ G+W +RK + VKK+PGCSWIE+ S++H F V D +P +Y LE
Sbjct: 648 TYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEV 707
Query: 669 LTANLNSV 676
+ A + +
Sbjct: 708 IGARMRKL 715
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 106/260 (40%), Gaps = 64/260 (24%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-- 66
Q E + N +T + G++V A+ +FD M ++ VVSWNT+L GY D
Sbjct: 330 QPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKA 389
Query: 67 -----------------------------ESLSLVSTMHRSNVKLNETTFSTILSVCAQL 97
++L L + M +VK + T++ ++ C +L
Sbjct: 390 VEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGEL 449
Query: 98 NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
+L G+Q+H +++ G+E G+ LL YA C + +A+
Sbjct: 450 GALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARL----------------- 492
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
VF+ MP D V W +IS + G E AL+LF M G + P+
Sbjct: 493 --------------VFLVMPNLDSVSWNAMISALGQHGHGRE-ALELFDQMVAEGID-PD 536
Query: 218 EYTFDSVIRACARLGAFCEG 237
+F +++ AC G EG
Sbjct: 537 RISFLTILTACNHAGLVDEG 556
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 214/647 (33%), Positives = 333/647 (51%), Gaps = 51/647 (7%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N ++ + G L +AR +FD++P VSW TM+ GY+ F ++ M S
Sbjct: 81 SWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSG 140
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ + TF+ +L+ CA +L GK++H V+K G V + LL YA C + AK
Sbjct: 141 ISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAK 200
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VFD + + W+ M+ ++Q A +F +M D+V W +I+GY G +
Sbjct: 201 VVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQ--GYD 258
Query: 200 -KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+AL+ F +M +S P+++T SV+ ACA + GK +H +++ + ++G A
Sbjct: 259 IRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNA 318
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
LI Y A + A R+ + P LN I++
Sbjct: 319 LISMYAKSGAVEVAHRIVEITGTPSLNV-----------------------------IAF 349
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
S++ GY G +D ++ +F+ + HR + V W +MI GY QN L
Sbjct: 350 TSLLDGYFKIGDIDPARAIFDSLKHRDV-----------------VAWTAMIVGYAQNGL 392
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
AL L+ M + T + + S L SL G+ LHA ++ S+V VG +
Sbjct: 393 ISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNA 452
Query: 439 LVDMYSRCGSINDAQASFSSISS-PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
L+ MYSR GSI DA+ F+ I S + WT+++ + HGLG+EA+ LFE ML ++ P
Sbjct: 453 LITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKP 512
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
+ T+VGVLSAC GLV +G F MK+ + + PT HY C++DLLGR+G L EA F
Sbjct: 513 DHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNF 572
Query: 557 IKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
I++MPIE D V WG+LLS+C +++ + AA+K+ +D AY+ L+N + GKW
Sbjct: 573 IRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKW 632
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
+RK + VKK+ G SW+++ ++VH F VED +P + IY
Sbjct: 633 EDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIY 679
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 232/534 (43%), Gaps = 89/534 (16%)
Query: 103 GKQIHCLVLKSGYECFE-FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYV 161
G+ IH ++K G F+ + LL Y +A R+FDE+ W+ +L +
Sbjct: 31 GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHA 90
Query: 162 QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTF 221
+ + A VF ++P+ D V WT +I GY + + A+ F M SG + P ++TF
Sbjct: 91 KAGNLDSARRVFDEIPQPDSVSWTTMIVGY-NHLGLFKSAVHAFLRMVSSGIS-PTQFTF 148
Query: 222 DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
+V+ +CA A GK VH ++K G + +L+ Y C D M
Sbjct: 149 TNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCG--DSVM-------- 198
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
A+++F+R+ ++ ++N+MI + + Q D + LF++M
Sbjct: 199 ---------------------AKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQM 237
Query: 342 PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK-LAIDRTRST 400
I+S WNS+I+GY +AL+ + M K ++ + T
Sbjct: 238 TDPDIVS-----------------WNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFT 280
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVK---------------------------------- 426
+ AC+ SL+ G+ +HAH+V+
Sbjct: 281 LGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITG 340
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
TP NV TSL+D Y + G I+ A+A F S+ +V AWTA++ GY+ +GL S+A++L
Sbjct: 341 TP-SLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVL 399
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
F +M+ + PN T VLS ++ G ++ V ++ ++ + R
Sbjct: 400 FRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSR 459
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGAL-LSACWFWMNMEVGERAAQKMFGLDKKP 599
SG + +A + + D + W ++ LS + E E +KM ++ KP
Sbjct: 460 SGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIE-LFEKMLRINLKP 512
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 132/560 (23%), Positives = 231/560 (41%), Gaps = 127/560 (22%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
+ Q ++ N + + G V A+ +FD+M ++ +WNTM+ + ++ +FD +L+L
Sbjct: 174 LGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALAL 233
Query: 72 VSTM----------------HR----------------SNVKLNETTFSTILSVCAQLNS 99
M H+ S++K ++ T ++LS CA S
Sbjct: 234 FDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRES 293
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED--NELLWSLML 157
L GKQIH ++++ + VG+ L+ YA +E A R+ + N + ++ +L
Sbjct: 294 LKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLL 353
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
GY + + A +F + +DVV WT +I GYA++ AL LFR M G PN
Sbjct: 354 DGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQN-GLISDALVLFRLMIREGPK-PN 411
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
YT +V+ + L + GK +H + I+ S+G ALI Y
Sbjct: 412 NYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRS----------- 460
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRL-TEANSISYNSMIKGYAVYGQVDDSKR 336
G I+DA IFN + + +++++ SMI A +G +++
Sbjct: 461 --------------------GSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIE 500
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-ID 395
LFEKM + +N ++ + +T+ ++S L E+ + M+ + I+
Sbjct: 501 LFEKM-----LRIN--------LKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIE 547
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
T S + AC ++D+ R G + +A
Sbjct: 548 PTSSHY-----AC------------------------------MIDLLGRAGLLEEAYNF 572
Query: 456 FSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA----TFVGVLSACV 510
++ P+V AW +L++ H A + E +L D PN + LSAC
Sbjct: 573 IRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLID--PNNSGAYLALANTLSAC- 629
Query: 511 RAGLVNEGMKIFRSMKSYGV 530
G + K+ +SMK V
Sbjct: 630 --GKWEDAAKVRKSMKDKAV 647
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 46/271 (16%)
Query: 297 MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-- 354
+GR A +I + L N+++ Y G D+ RLF++MP ++ S NT++S
Sbjct: 30 IGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAH 89
Query: 355 -----------VIPEMER-NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
V E+ + + V+W +MI GY L + A+ ++ M I T+ TF+
Sbjct: 90 AKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFT 149
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG--------------- 447
+ +C+ +L G+ +H+ +VK V V SL++MY++CG
Sbjct: 150 NVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLK 209
Query: 448 ----------------SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+ A A F ++ P++ +W +++ GY H G A+ F ML
Sbjct: 210 DTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFML 269
Query: 492 E-QDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+ + P+ T VLSAC + G +I
Sbjct: 270 KSSSLKPDKFTLGSVLSACANRESLKLGKQI 300
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 215/669 (32%), Positives = 344/669 (51%), Gaps = 56/669 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I N IT R G A +F MP R V++NT++ G+++ + +L + M
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S + + T S++L+ CA L L G Q+H + K+G + LL Y C ++E
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVET 297
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F+ N +LW+LMLV + Q N ++ +F++F +M +
Sbjct: 298 ALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI---------------- 341
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
PN++T+ ++R C G+ +H L +K GFE D + G
Sbjct: 342 -----------------RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSG 384
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----- 312
LI+ Y + A RV + L+ + + S+I G + +DA F + +
Sbjct: 385 VLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWP 444
Query: 313 -----ANSIS----YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM---- 359
A++IS N+M +G ++ ++ S + ++++L I E
Sbjct: 445 DNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSF 504
Query: 360 ----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ +TWN ++SG+ Q+ LHE+AL+++M M + + TF A + L ++
Sbjct: 505 EEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIK 564
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
QG+ +HA ++KT VG +L+ +Y +CGS DA+ FS +S N +W ++ S
Sbjct: 565 QGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCS 624
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTL 534
HG G EA+ LF+ M ++ I PN TF+GVL+AC GLV EG+ F+SM YG+ P
Sbjct: 625 QHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRP 684
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
+HY CV+D+ GR+G L A++FI++MPI DA+VW LLSAC N+EVGE AA+ +
Sbjct: 685 DHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLE 744
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
L+ ++YV+LSN YAV KW + +RK + V+K+PG SWIE+ + VHAF V DR
Sbjct: 745 LEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDR 804
Query: 655 NNPNCNVIY 663
+P IY
Sbjct: 805 LHPLAEQIY 813
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/572 (24%), Positives = 259/572 (45%), Gaps = 62/572 (10%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+NG ++ AR +F+++ R VSW ML GY++ +E+L L MHR+ V S+
Sbjct: 89 KNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS 148
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C + G+ IH K G+ FVG+ ++ Y C A+RVF ++ +
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ ++ ++ G+ QC G+ E AL++F M+
Sbjct: 209 TVTFNTLISGHAQC--------------------------GHG------EHALEIFEEMQ 236
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
SG + P+ T S++ ACA LG +G +H L K G D + G+L++ Y C
Sbjct: 237 FSGLS-PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDV 295
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-------ANSISYNSMI 322
+ A+ +++ + + N + L++ G+I D F + N +Y ++
Sbjct: 296 ETALVIFNSSDRTNVVLWNLM---LVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCIL 352
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPV 364
+ ++D +++ S + V+ +M E++ V
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+W SMI+GYVQ+ + AL + M+K I + C+ + +++QG +HA +
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
+ + +V + +LV++Y+RCG I +A +SF I + W L++G++ GL EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
+F M + + N TFV LSA + +G +I + G E ++ L
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
G+ G +A+ +M E + V W ++++C
Sbjct: 593 GKCGSFEDAKMEFSEMS-ERNEVSWNTIITSC 623
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 158/679 (23%), Positives = 284/679 (41%), Gaps = 84/679 (12%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
M R S L G+ + LSL + R + L F+ L C +G
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRG-----NG 55
Query: 104 K------QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
+ +IH + G + VG+ L+ Y+ + A+RVF+EL
Sbjct: 56 RRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL------------ 103
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
+D V W ++SGYA++ G E+AL L+R M +G +P
Sbjct: 104 -------------------SARDNVSWVAMLSGYAQNGLG-EEALGLYRQMHRAG-VVPT 142
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
Y SV+ +C + F +G+++H K GF + +G A+I Y C +F A RV+
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDD 333
+ + N+LI+G G E A IF + + ++ +S++ A G +
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 334 SKRLFEKMPHRSIIS-----------------LNTMISVIPEMER-NPVTWNSMISGYVQ 375
+L + I S + T + + +R N V WN M+ + Q
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N K+ +L+ M+ I + T+ + C+C + G+ +H+ VKT FES++YV
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
L+DMYS+ G + A+ + +V +WT+++ GY H +A+ F+ M + I
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P+ +S C + +G++I + G + + +V+L R G + EA
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFS 502
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI--SAYVILSNIYAVL 613
+++ + D + W L+S + + E A + +D+ + + + +S + A
Sbjct: 503 SFEEIEHK-DEITWNGLVSG---FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASA 558
Query: 614 G----KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF--------SVEDRNNPNCNV 661
K GK++ R T + + G + I L + +F + +RN + N
Sbjct: 559 NLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNT 618
Query: 662 IYATLEHLTANLNSVVLFD 680
I + L ++ LFD
Sbjct: 619 IITSCSQHGRGLEALDLFD 637
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 215/669 (32%), Positives = 344/669 (51%), Gaps = 56/669 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I N IT R G A +F MP R V++NT++ G+++ + +L + M
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S + + T S++L+ CA L L G Q+H + K+G + LL Y C ++E
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVET 297
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F+ N +LW+LMLV + Q N ++ +F++F +M +
Sbjct: 298 ALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI---------------- 341
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
PN++T+ ++R C G+ +H L +K GFE D + G
Sbjct: 342 -----------------RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSG 384
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----- 312
LI+ Y + A RV + L+ + + S+I G + +DA F + +
Sbjct: 385 VLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWP 444
Query: 313 -----ANSIS----YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM---- 359
A++IS N+M +G ++ ++ S + ++++L I E
Sbjct: 445 DNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSF 504
Query: 360 ----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ +TWN ++SG+ Q+ LHE+AL+++M M + + TF A + L ++
Sbjct: 505 EEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIK 564
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
QG+ +HA ++KT VG +L+ +Y +CGS DA+ FS +S N +W ++ S
Sbjct: 565 QGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCS 624
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTL 534
HG G EA+ LF+ M ++ I PN TF+GVL+AC GLV EG+ F+SM YG+ P
Sbjct: 625 QHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRP 684
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
+HY CV+D+ GR+G L A++FI++MPI DA+VW LLSAC N+EVGE AA+ +
Sbjct: 685 DHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLE 744
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
L+ ++YV+LSN YAV KW + +RK + V+K+PG SWIE+ + VHAF V DR
Sbjct: 745 LEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDR 804
Query: 655 NNPNCNVIY 663
+P IY
Sbjct: 805 LHPLAEQIY 813
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 141/572 (24%), Positives = 259/572 (45%), Gaps = 62/572 (10%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+NG ++ AR +F+++ R VSW ML GY++ +E+L L MHR+ V S+
Sbjct: 89 KNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS 148
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C + G+ IH K G+ FVG+ ++ Y C A+RVF ++ +
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ ++ ++ G+ QC G+ E AL++F M+
Sbjct: 209 TVTFNTLISGHAQC--------------------------GHG------EHALEIFEEMQ 236
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
SG + P+ T S++ ACA LG +G +H L K G D + G+L++ Y C
Sbjct: 237 FSGLS-PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDV 295
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-------ANSISYNSMI 322
+ A+ +++ + + N + L++ G+I D F + N +Y ++
Sbjct: 296 ETALVIFNSSDRTNVVLWNLM---LVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCIL 352
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPV 364
+ ++D +++ S + V+ +M E++ V
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+W SMI+GYVQ+ + AL + M+K I + C+ + +++QG +HA +
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
+ + +V + +LV++Y+RCG I +A +SF I + W L++G++ GL EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEAL 532
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
+F M + + N TFV LSA + +G +I + G E ++ L
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
G+ G +A+ +M E + V W ++++C
Sbjct: 593 GKCGSFEDAKMEFSEMS-ERNEVSWNTIITSC 623
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 158/679 (23%), Positives = 284/679 (41%), Gaps = 84/679 (12%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
M R S L G+ + LSL + R + L F+ L C +G
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRG-----NG 55
Query: 104 K------QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
+ +IH + G + VG+ L+ Y+ + A+RVF+EL
Sbjct: 56 RRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL------------ 103
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
+D V W ++SGYA++ G E+AL L+R M +G +P
Sbjct: 104 -------------------SARDNVSWVAMLSGYAQNGLG-EEALGLYRQMHRAGV-VPT 142
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
Y SV+ +C + F +G+++H K GF + +G A+I Y C +F A RV+
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDD 333
+ + N+LI+G G E A IF + + ++ +S++ A G +
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 334 SKRLFEKMPHRSIIS-----------------LNTMISVIPEMER-NPVTWNSMISGYVQ 375
+L + I S + T + + +R N V WN M+ + Q
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N K+ +L+ M+ I + T+ + C+C + G+ +H+ VKT FES++YV
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
L+DMYS+ G + A+ + +V +WT+++ GY H +A+ F+ M + I
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P+ +S C + +G++I + G + + +V+L R G + EA
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFS 502
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI--SAYVILSNIYAVL 613
+++ + D + W L+S + + E A + +D+ + + + +S + A
Sbjct: 503 SFEEIEHK-DEITWNGLVSG---FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASA 558
Query: 614 G----KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF--------SVEDRNNPNCNV 661
K GK++ R T + + G + I L + +F + +RN + N
Sbjct: 559 NLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNT 618
Query: 662 IYATLEHLTANLNSVVLFD 680
I + L ++ LFD
Sbjct: 619 IITSCSQHGRGLEALDLFD 637
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 212/651 (32%), Positives = 342/651 (52%), Gaps = 69/651 (10%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
GR G L A +F +MP R + SW +L + F+E+LSL + ++ L F
Sbjct: 105 GRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFP 164
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L +C L L G+Q+H +V+K C ++ A ++F
Sbjct: 165 VVLKLCGGLRVLELGRQLHGVVIK------------------RCADMGSALKIFSGFSVK 206
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMP--KKDVVVWTKLISGYAKSVDGCEKALKLFR 206
N + ++ M+VGY + + A ++F +M KD + W +ISGYA ++ ++AL +FR
Sbjct: 207 NVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLL-FDEALSMFR 265
Query: 207 --WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
M E E + +T SV+ ACA + + GK VH + G ++ +GGAL+E Y
Sbjct: 266 DLLMEEGIE--ADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYS 323
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG 324
CE ++ A+L F+ +TE ++ ++N +I G
Sbjct: 324 KCE-------------------------------DLKAAQLAFDGVTERDTATWNVLISG 352
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
YA Q+++ + L +KM E N TWN +ISG+V+N +E AL+
Sbjct: 353 YACCNQLENIQNLIQKMKGDGF-------------EPNVYTWNGIISGHVENGHNELALR 399
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
L+ M+ ++ T ++ AC+ L ++ +G+ +HAH ++ +E +V++G +LVDMY+
Sbjct: 400 LFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYA 459
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+CGSI A ++ IS+PN+ + A++ Y+ HG G E + LF ML P+ TF+
Sbjct: 460 KCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLS 519
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
VLS+CV AG V G + F M Y V P+L+HYTC+VDLL R+G L EA E +K +P +
Sbjct: 520 VLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKP 579
Query: 565 DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRK 624
D+V+WGALL C W N+E+GE AA+ + L+ YV+L+N+YA G+W R+
Sbjct: 580 DSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQ 639
Query: 625 RLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
+ + K PGCSWIE +H F D+++ IY TL++L ++ +
Sbjct: 640 MIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNLNTHMRT 690
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 191/387 (49%), Gaps = 32/387 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLV-ST 74
+VS N I NG + A+ LFDQM + + +SWN+M+ GY+ FDE+LS+
Sbjct: 208 VVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDL 267
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
+ ++ + T ++L+ CA + SL GK++H + G FVG L+ Y+ C +
Sbjct: 268 LMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCED 327
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISG 190
++ A+ FD + E + W++++ GY CN + + ++ KM + +V W +ISG
Sbjct: 328 LKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISG 387
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
+ ++ E AL+LF M+ S P+ YT ++ ACARL GK VH I+ G+E
Sbjct: 388 HVENGHN-ELALRLFTEMQTSSLR-PDIYTVGIILPACARLATIARGKQVHAHSIRQGYE 445
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
D IG AL++ Y C + AM+VY+R+ NP L + N+++ G ++ +F +
Sbjct: 446 LDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNM 505
Query: 311 T----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS-----------------L 349
+ +++ S++ G V+ F+ M + ++ L
Sbjct: 506 LGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRL 565
Query: 350 NTMISVIPEMERNP--VTWNSMISGYV 374
+ ++ ++ R P V W +++ G V
Sbjct: 566 DEAYELVKKIPRKPDSVMWGALLGGCV 592
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 27/217 (12%)
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
+L A ++++ ID ST++ L +C +L G+ +HAH +KT F + +V
Sbjct: 43 HLSTAAHHTHLSLLDKQIDS--STYASLLESCR---TLNLGKQVHAHTLKTGFHGHEFVE 97
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
T L+ MY R G ++DA F + N+ +WTA+++ + HG EA+ LFE + DI
Sbjct: 98 TKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIG 157
Query: 497 PNAATFVGVLSAC-----------------VRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
F VL C R + +KIF VV Y
Sbjct: 158 LEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVS----YNT 213
Query: 540 VVDLLGRSGHLHEAEEFIKDMP-IELDAVVWGALLSA 575
++ +G++ +A+E M + D + W +++S
Sbjct: 214 MIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISG 250
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 228/717 (31%), Positives = 358/717 (49%), Gaps = 62/717 (8%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRT--VVSWNTMLCGYSKWAKFDESLS 70
T I + N I + ++ A LFD+MP+R VSW TM+ GYS+ S
Sbjct: 69 THHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFE 128
Query: 71 LVSTMHRSN----VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
S M R + +F++++ C L Q+H LV K G+ + + ++
Sbjct: 129 TFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVV 188
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
Y C +++ A+ VF ++ + W+ M+ GY Q A +F +MP++D V W
Sbjct: 189 GMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNT 248
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
LIS +++ G + L +F M G + PN T+ SV+ ACA G +H +++
Sbjct: 249 LISIFSQHGFGVQ-CLAMFVEMCNQGFS-PNFMTYGSVLSACASTSDLKWGAHLHARILR 306
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
D G LI+ Y C D A RV+ L + NSLI G++ G EDA ++
Sbjct: 307 MEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALIL 366
Query: 307 FNRLTEANSI----------------SY-----------------------NSMIKGYAV 327
FN++ ++ + Y N++I YA
Sbjct: 367 FNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAK 426
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNSMISGY 373
G D + +F MP R+ IS MI+ ERN VTWNSM+S Y
Sbjct: 427 CGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTY 486
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
VQN E+ L+LY++MR + TF+ AC+ L ++ G + H K NV
Sbjct: 487 VQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNV 546
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
V S+V MYSRCG I +A+ +F SI ++ +W A++ ++ +GLG + + FE ML+
Sbjct: 547 SVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKT 606
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ PN ++V VLS C GLV EG F SM + +G+ PT EH++C+VDLLGR+G L +
Sbjct: 607 ECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQ 666
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A++ I+ MP + +A VW ALL +C ++ + E AA+K+ LD + YV+LSN+Y+
Sbjct: 667 AKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSE 726
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
G+ D+RK + ++ GCSWIE+++RVH F+V++ ++P +Y LE +
Sbjct: 727 SGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEM 783
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 211/478 (44%), Gaps = 55/478 (11%)
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
+++H ++ SG + F+ + LL Y+NC +A +VF E H N W+ M+ V
Sbjct: 27 ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86
Query: 163 CNLMSDAFDVFIKMPK--KDVVVWTKLISGYAKS---VDGCEKALKLFRWMRESGENMPN 217
+ MSDA +F +MP KD V WT +ISGY+++ E + R + G+N +
Sbjct: 87 SSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNY-D 145
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
++F SV++AC LG +H L+ K GF + I +++ Y C D A V+
Sbjct: 146 PFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFF 205
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRL 337
+E P L NS+I G M A IFNR+ E + +S+N++I
Sbjct: 206 DIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLI--------------- 250
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
SI S Q+ + L +++ M
Sbjct: 251 -------SIFS--------------------------QHGFGVQCLAMFVEMCNQGFSPN 277
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
T+ + AC+ L+ G LHA +++ ++ G L+DMY++CG ++ A+ F
Sbjct: 278 FMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFK 337
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
S+ + +W +L+ G H GLG +A++LF M +V + +L C +
Sbjct: 338 SLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYAST 397
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + G+ + ++ + + G +A+ + MP+ + + W A+++A
Sbjct: 398 GELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITA 454
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 218/656 (33%), Positives = 347/656 (52%), Gaps = 68/656 (10%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V+ N I+ N + AR +F++MP R ++SWN ML GY K + +L + M
Sbjct: 92 VTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEK 151
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+V +++ +LS AQ + + ++I +L E +GLL Y IE+A
Sbjct: 152 DV----VSWNAMLSGFAQNGFVEEARKIFDQMLVKN----EISWNGLLSAYVQNGRIEDA 203
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+R+FD + + W+ ++ GYV+ + DA +F +MP +D + W +I+GYA++
Sbjct: 204 RRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN-GLL 262
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+A +LF E +P IR A G V +G+L
Sbjct: 263 SEARRLF-------EELP--------IRDVFAWTAMVSGFVQNGML-------------- 293
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
D A R+++ + + N++I G + +IE A +F+++ N+ S+
Sbjct: 294 -----------DEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSW 342
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+M+ GYA G +D +K LF++MP R IS W +MISGY Q+
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCIS-----------------WAAMISGYAQSGQ 385
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
E+AL L++ M++ RS + +C+ + +L+ G+ LH LVK F++ G +
Sbjct: 386 SEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNA 445
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+ MY +CGSI +A F I+ ++ +W ++ GY+ HG G EA+ LFE M + I P+
Sbjct: 446 LLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPD 504
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
T VGVLSAC G V++GM+ F SM ++YG+ +HYTC++DLLGR+G L EA +
Sbjct: 505 DVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLM 564
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
K MP DA WGALL A + E+GE+AA+K+F ++ YV+LSN+YA G+W
Sbjct: 565 KSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWR 624
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ ++R ++ VKK PG SW+E+ ++ H F+V D ++P IYA LE L L
Sbjct: 625 EVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLEL 680
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 135/523 (25%), Positives = 222/523 (42%), Gaps = 103/523 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IVS N + R +L AR+LFD+MP+R +SWN M+ GY++ E+ L +
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPI 274
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+V ++ ++S Q N ++D + + E E + ++ Y +IE+
Sbjct: 275 RDV----FAWTAMVSGFVQ-NGMLDEA---TRIFEEMPEKNEVSWNAMIAGYVQSQQIEK 326
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ +FD++ N W+ M+ GY QC + A +F +MP++D + W +ISGYA+S
Sbjct: 327 ARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQ- 385
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E+AL LF M+ G + N + +CA + A GK +HG L+K GF+ G
Sbjct: 386 SEEALHLFIKMKRDG-GILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGN 444
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL+ Y C G IE+A +F +TE + +S
Sbjct: 445 ALLAMYGKC-------------------------------GSIEEAFDVFEDITEKDIVS 473
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+N+MI GYA +G ++ LFE M
Sbjct: 474 WNTMIAGYARHGFGKEALALFESM------------------------------------ 497
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVG 436
K+ I T + ACS G + +G + ++ +N
Sbjct: 498 -------------KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHY 544
Query: 437 TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSEAV-LLFEIML 491
T ++D+ R G +++A S+ P+ A W AL+ HG LG +A +FE +
Sbjct: 545 TCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFE--M 602
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV--VP 532
E D N+ +V + + +G E ++ M+ GV VP
Sbjct: 603 EPD---NSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVP 642
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 144/289 (49%), Gaps = 32/289 (11%)
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N I+ + G+ E A +FN + ++++YN+MI GY + D ++++FEKMP R +I
Sbjct: 64 NRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLI 123
Query: 348 SLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
S N M+S + +M E++ V+WN+M+SG+ QN E+A +++ M
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM---- 179
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHA-HLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ + +++ L A +Q G++ A L + + + L+ Y R ++DA
Sbjct: 180 LVKNEISWNGLLSAY-----VQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDA 234
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
++ F + + +W ++ GY+ +GL SEA LFE + +D+ + ++S V+
Sbjct: 235 RSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVF----AWTAMVSGFVQN 290
Query: 513 GLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
G+++E +IF M V + ++ +S + +A E MP
Sbjct: 291 GMLDEATRIFEEMPEKNEVS----WNAMIAGYVQSQQIEKARELFDQMP 335
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 160/326 (49%), Gaps = 38/326 (11%)
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
CE+ A+ V++ + N++I+G +S + + A +F ++ + + IS+N M+ GY
Sbjct: 76 CES---ALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGY 132
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE--------------MERNPVTWNSMIS 371
G + ++ LF +MP + ++S N M+S + + +N ++WN ++S
Sbjct: 133 VKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLS 192
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV--KTPF 429
YVQN E A +L+ ++ + ++ C G +++ +L A + + P
Sbjct: 193 AYVQNGRIEDARRLF---------DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPV 243
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ ++ Y++ G +++A+ F + +V AWTA+++G+ +G+ EA +FE
Sbjct: 244 RDKISWNI-MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEE 302
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
M E+ N ++ +++ V++ + + ++F M S + +V + G+
Sbjct: 303 MPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSRNT----SSWNTMVTGYAQCGN 354
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSA 575
+ +A+ +MP + D + W A++S
Sbjct: 355 IDQAKILFDEMP-QRDCISWAAMISG 379
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
V WN IS Y++ E AL ++ MR+ R+ T++ + G L + A
Sbjct: 61 VKWNRKISAYMRKGQCESALSVFNGMRR----RSTVTYNAMIS-----GYLSNNKFDCAR 111
Query: 424 LV--KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
V K P + ++ ++ Y + G+++ A+A F+ + +V +W A+++G++ +G
Sbjct: 112 KVFEKMP-DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
EA +F+ ML V N ++ G+LSA V+ G + + ++F S + +V + C++
Sbjct: 171 EARKIFDQML----VKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVS----WNCLM 222
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
R L +A MP+ D + W +++
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVR-DKISWNIMITG 255
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T ++ N + G+ G + A ++F+ + + +VSWNTM+ GY++ E+L+L +
Sbjct: 437 QTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFES 496
Query: 75 MHRSNVKLNETTFSTILSVCAQ 96
M + +K ++ T +LS C+
Sbjct: 497 M-KMTIKPDDVTLVGVLSACSH 517
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
T +S++ + Y R G A + F+ + + + A+++GY + A +
Sbjct: 54 TIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKV 113
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
FE M ++D++ ++ +LS V+ G ++ +F M VV + ++ +
Sbjct: 114 FEKMPDRDLI----SWNVMLSGYVKNGNLSAARALFNQMPEKDVVS----WNAMLSGFAQ 165
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+G + EA + M ++ + + W LLSA
Sbjct: 166 NGFVEEARKIFDQMLVK-NEISWNGLLSA 193
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 220/715 (30%), Positives = 359/715 (50%), Gaps = 112/715 (15%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E + S N +T ++ AR LFDQMP R VSW M+ GY + + E+ +
Sbjct: 292 EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVK 351
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M R+ + +++ F +LS L+ L + + +K+GYE VGS +L Y
Sbjct: 352 MCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGS 411
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK--------------- 179
++ A F+ + E NE W+ M+ + QC + DA ++ ++P++
Sbjct: 412 LDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQV 471
Query: 180 ----------------DVVVWTKLISGYAKSVDGCEKALKLFRWM--------------- 208
+VV W +I+GY ++ ++A LF+ M
Sbjct: 472 GRIQKARLIFDEILNPNVVAWNAIIAGYTQN-GMLKEAKDLFQKMPVKNSASWAAMIAGF 530
Query: 209 ------RESGE---------NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
RE+ E ++P++ +F S + ACA +G G+V+H L IK G +F+
Sbjct: 531 VQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNS 590
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
+ LI Y C G +ED +F +
Sbjct: 591 YVMNGLISMYAKC-------------------------------GNVEDGSHVFRTIRVK 619
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
+++S+NS+I G + +DD++ +FEKMP R ++S W ++IS Y
Sbjct: 620 DTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVS-----------------WTAIISAY 662
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
VQ E AL L++ M I + T + L AC LG+++ G+ HA + K F++ +
Sbjct: 663 VQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFL 722
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+VG SL+ MY +CG D F + ++ W A++ G + +GLG EA+ +FE M +
Sbjct: 723 FVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVE 781
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHE 552
I+P+ +F+GVL AC AGLV+EG F SM + YG++P + HYTC+VDLLGR+G+L E
Sbjct: 782 GILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSE 841
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
AE I++MP++ D+V+W ALL AC N+E+G+R A+++F + K + YV+LSN++A
Sbjct: 842 AEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFAS 901
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
G W K +IRK + + K+PG SWI++ +++H F DR + IY+ L+
Sbjct: 902 QGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALK 956
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 150/575 (26%), Positives = 282/575 (49%), Gaps = 62/575 (10%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLV 72
T +T + N I E GR G++ AR +F++M R VVSWN+M+ GYS+ K DE+ L
Sbjct: 166 TPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF 225
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
N++ T++ +L+ A+ + + +++ + + + + SG Y
Sbjct: 226 DAFVGKNIR----TWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISG----YVQN 277
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
+++ A+++FDE+ E N W+ ++ GY C MS+A ++F +MP+++ V W +ISGY
Sbjct: 278 GDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYV 337
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
D E + R P++ F V+ A L + + IK G+E D
Sbjct: 338 HISDYWEAWDVFVKMCRTVAR--PDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGD 395
Query: 253 ESIGGALIEFY-------------------------------CGCEAFDGAMRVYDRLEN 281
+G A++ Y C D A+++Y+R+
Sbjct: 396 VVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPE 455
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ +++ +GRI+ A LIF+ + N +++N++I GY G + ++K LF+KM
Sbjct: 456 QTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKM 515
Query: 342 PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
P +N +W +MI+G+VQN +AL+L + + + + S+F
Sbjct: 516 P-----------------VKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSF 558
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
+ AC+ +G ++ G+++H+ +KT + N YV L+ MY++CG++ D F +I
Sbjct: 559 TSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRV 618
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+ +W +L++G S + + +A ++FE M ++D+V ++ ++SA V+AG + +
Sbjct: 619 KDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVV----SWTAIISAYVQAGHGEVALDL 674
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
F M + G+ P T ++ G G + E+F
Sbjct: 675 FLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQF 709
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 209/416 (50%), Gaps = 34/416 (8%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG---ENMPNEYTF--DSVIRACARLGA 233
K + +KL + +A+ +D ++ + R +SG + P + F ++ I+ RLG
Sbjct: 129 KHLTSQSKLNTRHARWMDYLQQFKFVIR--HKSGAKNKETPQTHLFQCNTRIQELGRLGR 186
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
E + V +I + D ++I Y D A ++D + L+ G
Sbjct: 187 VEEARRVFNEMI----QRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTG 242
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
GRIE+A +F +TE N +S+N+MI GY G + ++++LF++MP +++ S N+++
Sbjct: 243 YAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVV 302
Query: 354 S-------------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+ + +M ERN V+W MISGYV + + +A +++ M + +S
Sbjct: 303 TGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQS 362
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
F V+ A + L L+ L +KT +E +V VG+++++ Y+R GS++ A F ++
Sbjct: 363 IFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETM 422
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
N +WT ++ ++ G +A+ L+E + EQ + AT +++A + G + +
Sbjct: 423 PERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTV----ATKTAMMTAYAQVGRIQKAR 478
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
IF + + P + + ++ ++G L EA++ + MP++ ++ W A+++
Sbjct: 479 LIFDEI----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK-NSASWAAMIAG 529
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 241/766 (31%), Positives = 368/766 (48%), Gaps = 123/766 (16%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS NK I ++ + A + F+ MP+R VVSWN+ML GY + + +S+ + M R
Sbjct: 72 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 131
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ + TF+ IL VC+ L G QIH +V++ G + S LL YA E
Sbjct: 132 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 191
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK------------------- 178
+ RVF + E N + WS ++ G VQ NL+S A F +M K
Sbjct: 192 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 251
Query: 179 --------------------KDVVVWTKLISGYAKSVDGCEKALKLF----RWMRESGEN 214
D +V T + YAK D + A LF R+S
Sbjct: 252 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAK-CDNMQDAQILFDNSENLNRQSYNA 310
Query: 215 MPNEYT---------------------FD-----SVIRACARLGAFCEGKVVHGLLIKCG 248
M Y+ FD V RACA + EG ++GL IK
Sbjct: 311 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 370
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI-----NG--------LI 295
D + A I+ Y C+A A RV+D + + N++I NG +
Sbjct: 371 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 430
Query: 296 SM--GRIEDAELIFNRLTEA---NSISYN--------------------SMIKGYAVYGQ 330
SM RIE E F + +A S+ Y S+I Y+ G
Sbjct: 431 SMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 490
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNP--------VTWNSMISGYVQNNLHEKA 382
+++++++ + R+ +S + E+E+ V+WNS+ISGYV E A
Sbjct: 491 IEEAEKIHSRFFQRANVS-----GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDA 545
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L+ M ++ I + T++ + C+ L S G+ +HA ++K +S+VY+ ++LVDM
Sbjct: 546 QMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDM 605
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
YS+CG ++D++ F + W A++ GY+HHG G EA+ LFE M+ ++I PN TF
Sbjct: 606 YSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 665
Query: 503 VGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+ +L AC GL+++G++ F MK YG+ P L HY+ +VD+LG+SG + A E I++MP
Sbjct: 666 ISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMP 725
Query: 562 IELDAVVWGALLSACWFWM-NMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKM 620
E D V+W LL C N+EV E A + LD + SAY +LSN+YA G W K
Sbjct: 726 FEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVS 785
Query: 621 DIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
D+R+ + ++KK+PGCSW+EL +H F V D+ +P IY L
Sbjct: 786 DLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEEL 831
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 225/484 (46%), Gaps = 25/484 (5%)
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
CA+ +L GKQ H ++ SG+ FV + LL Y N + A VFD++ + + W
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ M+ GY + N M A F MP +DVV W ++SGY ++ + K++++F M G
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESL-KSIEVFVDMGREGI 134
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
TF +++ C+ L G +HG++++ G + D AL++ Y + F ++
Sbjct: 135 EFDGR-TFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 193
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS-IS---YNSMIKGYAVYG 329
RV+ + + +++I G + + A F + + N+ +S Y S+++ A
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 253
Query: 330 QVD-----DSKRLFEKMPHRSIISLNT--MISVIPEMER-----------NPVTWNSMIS 371
++ + L I+ T M + M+ N ++N+MI+
Sbjct: 254 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 313
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
GY Q KAL L+ + + + S +F AC+ + L +G ++ +K+
Sbjct: 314 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 373
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+V V + +DMY +C ++ +A F + + +W A++ + +G G E + LF ML
Sbjct: 374 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 433
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
I P+ TF +L AC G + GM+I S+ G+ ++D+ + G +
Sbjct: 434 RSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIE 492
Query: 552 EAEE 555
EAE+
Sbjct: 493 EAEK 496
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 241/766 (31%), Positives = 368/766 (48%), Gaps = 123/766 (16%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS NK I ++ + A + F+ MP+R VVSWN+ML GY + + +S+ + M R
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ + TF+ IL VC+ L G QIH +V++ G + S LL YA E
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK------------------- 178
+ RVF + E N + WS ++ G VQ NL+S A F +M K
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 179 --------------------KDVVVWTKLISGYAKSVDGCEKALKLF----RWMRESGEN 214
D +V T + YAK D + A LF R+S
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAK-CDNMQDAQILFDNSENLNRQSYNA 352
Query: 215 MPNEYT---------------------FD-----SVIRACARLGAFCEGKVVHGLLIKCG 248
M Y+ FD V RACA + EG ++GL IK
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI-----NG--------LI 295
D + A I+ Y C+A A RV+D + + N++I NG +
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 296 SM--GRIEDAELIFNRLTEA---NSISYN--------------------SMIKGYAVYGQ 330
SM RIE E F + +A S+ Y S+I Y+ G
Sbjct: 473 SMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNP--------VTWNSMISGYVQNNLHEKA 382
+++++++ + R+ +S + E+E+ V+WNS+ISGYV E A
Sbjct: 533 IEEAEKIHSRFFQRANVS-----GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDA 587
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L+ M ++ I + T++ + C+ L S G+ +HA ++K +S+VY+ ++LVDM
Sbjct: 588 QMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDM 647
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
YS+CG ++D++ F + W A++ GY+HHG G EA+ LFE M+ ++I PN TF
Sbjct: 648 YSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 707
Query: 503 VGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+ +L AC GL+++G++ F MK YG+ P L HY+ +VD+LG+SG + A E I++MP
Sbjct: 708 ISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMP 767
Query: 562 IELDAVVWGALLSACWFWM-NMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKM 620
E D V+W LL C N+EV E A + LD + SAY +LSN+YA G W K
Sbjct: 768 FEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVS 827
Query: 621 DIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
D+R+ + ++KK+PGCSW+EL +H F V D+ +P IY L
Sbjct: 828 DLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 132/531 (24%), Positives = 245/531 (46%), Gaps = 26/531 (4%)
Query: 47 RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
R+VVS+N L + + +++ N ++ T FS + CA+ +L GKQ
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVN-SVSTTNFSFVFKECAKQGALELGKQA 70
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H ++ SG+ FV + LL Y N + A VFD++ + + W+ M+ GY + N M
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
A F MP +DVV W ++SGY ++ + K++++F M G TF +++
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQNGESL-KSIEVFVDMGREGIEFDGR-TFAIILK 188
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
C+ L G +HG++++ G + D AL++ Y + F ++RV+ + +
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANS-IS---YNSMIKGYAVYGQVD-----DSKRL 337
+++I G + + A F + + N+ +S Y S+++ A ++ + L
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 338 FEKMPHRSIISLNT--MISVIPEMER-----------NPVTWNSMISGYVQNNLHEKALQ 384
I+ T M + M+ N ++N+MI+GY Q KAL
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
L+ + + + S +F AC+ + L +G ++ +K+ +V V + +DMY
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 428
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+C ++ +A F + + +W A++ + +G G E + LF ML I P+ TF
Sbjct: 429 KCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGS 488
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
+L AC G + GM+I S+ G+ ++D+ + G + EAE+
Sbjct: 489 ILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 538
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 214/671 (31%), Positives = 348/671 (51%), Gaps = 53/671 (7%)
Query: 4 YATQSQTLMTQETL--IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
YA ++ L + L S N ++ + G + ++ FD++P R VSW TM+ GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
++ +++ ++ M R ++ ++ T + +L+ A L GK++H ++K G V
Sbjct: 124 IGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSV 183
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+ LL YA C + AK VFD + + W+ M+ ++Q M A F +M ++D+
Sbjct: 184 SNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 182 VVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
V W +ISGY + G + +AL +F M P+ +T SV+ ACA L C G+ +
Sbjct: 244 VTWNSMISGYNQR--GYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQI 301
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
H ++ GF+ + ALI Y C + A R+ ++ L +I
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL--------------KI 347
Query: 301 EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
E + +++ GY G ++++K +F+ + +
Sbjct: 348 E---------------GFTALLDGYIKLGDMNEAKNIFDSLK-----------------D 375
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
R+ V W +MI GY Q+ L+ +A+ L+ +M T + + S L SL G+ +
Sbjct: 376 RDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQI 435
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGL 479
H VK+ +V V +L+ MY++ GSI A +F I + +WT+++ + HG
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG-VVPTLEHYT 538
EA+ LFE ML + + P+ T+VGV SAC AGLVN+G + F MK ++PTL HY
Sbjct: 496 AEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYA 555
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
C+VDL GR+G L EA+EFI+ MPIE D V WG+LLSAC + N+++G+ AA+++ L+ +
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPE 615
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
AY L+N+Y+ GKW + IRK + VKK+ G SWIE+ +VHAF VED +P
Sbjct: 616 NSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQ 675
Query: 659 CNVIYATLEHL 669
N IY T++ +
Sbjct: 676 KNEIYITMKKI 686
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 234/532 (43%), Gaps = 92/532 (17%)
Query: 86 TFSTILSVCAQL--------NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ ST+L +C L N + +HC V+KSG ++ + L+ Y+
Sbjct: 8 SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALH 67
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+++FDE+ W+ +L Y + M + + F ++P++D V WT +I GY K++
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGY-KNIGQ 126
Query: 198 CEKALKLF-RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
KA+++ MRE E P+++T +V+ + A GK VH ++K G + S+
Sbjct: 127 YHKAIRIMGEMMREGIE--PSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVS 184
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
+L+ Y C A V+DR+ +++ N++I + +G+++ A F ++ E + +
Sbjct: 185 NSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
++NSMI GY G + +F KM S++S P+
Sbjct: 245 TWNSMISGYNQRGYDLRALDMFSKMLRDSMLS--------PD------------------ 278
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
R T + + AC+ L L G+ +H+H+V T F+ + V
Sbjct: 279 ---------------------RFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVL 317
Query: 437 TSLVDMYSRCGSI---------------------------------NDAQASFSSISSPN 463
+L+ MYSRCG + N+A+ F S+ +
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRD 377
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V AWTA++ GY HGL EA+ LF M+ ++ PN+ T +LS + G +I
Sbjct: 378 VVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHG 437
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
S G + ++ ++ + ++G + A + E D V W +++ A
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIA 489
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/654 (31%), Positives = 341/654 (52%), Gaps = 56/654 (8%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
+L A N+F +MP R V W+ ++ GY + +F E L L M + +++ TF++
Sbjct: 220 KLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFR 279
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
CA L++ G Q+H LK+ + VG+ L YA
Sbjct: 280 SCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYA---------------------- 317
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
+C+ M DA VF P LI GYA+ D +AL++FR +++S
Sbjct: 318 ---------KCDRMVDARKVFNTFPNPTRQSHNALIVGYARQ-DQVLEALEIFRSLQKSY 367
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+ +E + + AC+ + + EG +HGL +KCG +F+ + +++ Y C A A
Sbjct: 368 LDF-DEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEA 426
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK----- 323
++D +E + N++I +E+ +F + E + ++ S++K
Sbjct: 427 CLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGK 486
Query: 324 -----GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTWNSMI 370
G V+G+V S + +II + ++ E E R V+WNS+I
Sbjct: 487 KALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSII 546
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
SG+ E AL + M ++ + T++ + C+ L +++ G+ +H ++K
Sbjct: 547 SGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLH 606
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
S+VY+ +++VDMYS+CG++ D++ F + W+A++ Y++HGLG +A+ LFE M
Sbjct: 607 SDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEM 666
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGH 549
Q++ PN F+ VL AC G V++G+ FR M+S YG+ P +EHY+C+VDLLGRSG
Sbjct: 667 QLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQ 726
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
++EA E I+ MP E D V+W LL C N+EV E+AA + LD + SAYV+LSN+
Sbjct: 727 VNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNV 786
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
YA+ G WG+ IR + + ++KK+PGCSWI++ VHAF V D+ +P IY
Sbjct: 787 YAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIY 840
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/580 (24%), Positives = 272/580 (46%), Gaps = 56/580 (9%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S N I G + A+ LFD MP R VVSWN+ML Y + +S+ + + M
Sbjct: 104 VISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRL 163
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ + TF+ +L C + G Q+HCL ++ G++ G+ L+ Y+ C +++
Sbjct: 164 LEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDH 223
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F E+ E N + WS ++ GYV+ +D F
Sbjct: 224 AFNIFCEMPERNSVCWSAVIAGYVR----NDRF--------------------------- 252
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+ LKL++ M + G + ++ TF S R+CA L AF G +H +K F +D +G
Sbjct: 253 -TEGLKLYKVMLDEGMGV-SQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGT 310
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----- 312
A ++ Y C+ A +V++ NP + N+LI G ++ +A IF L +
Sbjct: 311 ATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDF 370
Query: 313 -----ANSISYNSMIKGY----AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE----- 358
+ +++ S IKGY ++G F +I+ + + E
Sbjct: 371 DEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIF 430
Query: 359 --ME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
ME ++ V+WN++I+ + QN E+ L L+++M + ++ TF + AC+ +L
Sbjct: 431 DDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALN 490
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G +H ++K+ + +VG++++DMY +CG + +A+ + +W ++++G+S
Sbjct: 491 YGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFS 550
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
G A+ F ML+ ++P+ T+ VL C V G +I + + +
Sbjct: 551 SEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVY 610
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ +VD+ + G++ ++ + P + D V W A++ A
Sbjct: 611 IASTIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICA 649
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 131/527 (24%), Positives = 245/527 (46%), Gaps = 36/527 (6%)
Query: 78 SNVKLNET---TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
S+ ++N T TFS I C+ L ++ GKQ H + +G+ FV + LL FY C
Sbjct: 29 SSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLN 88
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+ A VFD++ + + + W+ M+ GY M A +F MP++DVV W ++S Y ++
Sbjct: 89 LNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQN 148
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
K++++F MR E + TF V++AC + + G VH L I+ GF+ D
Sbjct: 149 -GFHRKSIEIFTKMRLL-EIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVV 206
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRLTE 312
G AL++ Y C+ D A ++ E P N+ +++I G + R + ++ + +
Sbjct: 207 TGTALVDMYSTCKKLDHAFNIF--CEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLD 264
Query: 313 A-------------------NSISYNSMIKGYAV-----YGQVDDSKRLFEKMPHRSIIS 348
++ + + YA+ Y + + L ++
Sbjct: 265 EGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVD 324
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
+ + P R + N++I GY + + +AL+++ +++K +D + S AC
Sbjct: 325 ARKVFNTFPNPTRQ--SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTAC 382
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
S + +G LH VK + N+ V +++DMY++CG++ +A F + + +W
Sbjct: 383 SAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWN 442
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
A++ + + E + LF ML + P+ TF V+ AC +N GM++ +
Sbjct: 443 AIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKS 502
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G+ + ++D+ + G L EAE+ I + E V W +++S
Sbjct: 503 GMGLDWFVGSAIIDMYCKCGMLVEAEK-IHERLEERTTVSWNSIISG 548
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 33/206 (16%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G LV A + +++ RT VSWN+++ G+S + + +LS S M + V + T++T+L
Sbjct: 522 GMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVL 581
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+CA L ++ GKQIH +LK ++ S ++ Y+ C +++++ +F++ + + +
Sbjct: 582 DICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYV 641
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS M+ Y L DA +F +M ++V
Sbjct: 642 TWSAMICAYAYHGLGEDAIKLFEEMQLQNV------------------------------ 671
Query: 212 GENMPNEYTFDSVIRACARLGAFCEG 237
PN F SV+RACA +G +G
Sbjct: 672 ---KPNHTIFISVLRACAHMGFVDKG 694
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 224/685 (32%), Positives = 352/685 (51%), Gaps = 93/685 (13%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
+CG G AR+LFD +P R+VVSWN + Y E++SL M S ++ NE
Sbjct: 56 AKCGGFGD---ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEF 112
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+ S++++VC L + G++IH ++K GY+ F + L+ YA
Sbjct: 113 SLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYA--------------- 157
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ ++ DA VF ++ K D+V W +I+G + +AL+L
Sbjct: 158 ----------------KVGILEDASSVFDEIAKPDIVSWNAIIAGCVLH-EYHHRALELL 200
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
R M +SG PN +T S ++ACA + G+ +H LIK D +G LI+ Y
Sbjct: 201 REMNKSG-MCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSK 259
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----------NRLT---- 311
C + D A V+ + + A N++I+G E+A +F N+ T
Sbjct: 260 CNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTV 319
Query: 312 -------------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
E ++ NS+I Y G V+D+ R+FE+ P I
Sbjct: 320 LKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESP---I 376
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
+ L V + S+++ Y Q+ E+AL+LY+ M+ I S L +
Sbjct: 377 VDL--------------VLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLN 422
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
AC+ L + +QG+ +H H++K F S+++ G SLV+MY++CGSI DA +FS I + +
Sbjct: 423 ACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVS 482
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
W+A++ G + HG G EA+ LF+ ML+ + PN T V VL AC AGLV E F SMK
Sbjct: 483 WSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMK 542
Query: 527 S-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
+G+ P EHY C++DLLGR+G L A E + MP + +A+VWGALL A N+++G
Sbjct: 543 ILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLG 602
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
E+AA+ + L+ + +V+L+NIYA +G W K +R+ + +VKK+PG SW+E+ +
Sbjct: 603 EQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDK 662
Query: 646 VHAFSVEDRNNPNCNVIYATLEHLT 670
V+ F V DR++ IYA L+ L+
Sbjct: 663 VYTFIVGDRSHSRSTEIYAKLDELS 687
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/541 (23%), Positives = 235/541 (43%), Gaps = 92/541 (17%)
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
MH +K NE F ++L C L+ GKQ+H +V+ +G++ EFV + L+ YA C
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+A+ +FD + + + + W+ + YV ++ +A +F M ++SG
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDM----------VLSGI--- 107
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
PNE++ S+I C L +G+ +HG LIK G++ D
Sbjct: 108 --------------------RPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAF 147
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING--------------------- 293
AL++ Y + A V+D + P + + N++I G
Sbjct: 148 SANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSG 207
Query: 294 -------------------LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
L +GR + LI + ++S +I Y+ +DD+
Sbjct: 208 MCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMG-SDSFLGVGLIDMYSKCNSMDDA 266
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+ +F+ MP ER+ + WN++ISG+ QN E+A L+ M I
Sbjct: 267 RLVFKLMP-----------------ERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGI 309
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
++T S + + + L + + +HA +K+ FE + YV SL+D Y +CG + DA
Sbjct: 310 GFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATR 369
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F ++ +T+L+ Y+ G G EA+ L+ M ++ I P++ +L+AC
Sbjct: 370 VFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSA 429
Query: 515 VNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+G ++ + +G + + +V++ + G + +A +P+ V W A++
Sbjct: 430 YEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVR-GIVSWSAMIG 488
Query: 575 A 575
Sbjct: 489 G 489
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 123/551 (22%), Positives = 227/551 (41%), Gaps = 98/551 (17%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N + + G L A ++FD++ +VSWN ++ G +L L+ M++S
Sbjct: 148 SANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSG 207
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ N T S+ L CA + G+Q+H ++K F+G GL+ Y+ C +++A+
Sbjct: 208 MCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDAR 267
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VF + E +D++ W +ISG++++ + E
Sbjct: 268 LVFKLMPE-------------------------------RDMIAWNAVISGHSQNEED-E 295
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+A LF M G N+ T +V+++ A L A + +H L +K GFEFD + +L
Sbjct: 296 EAASLFPLMHTEGIGF-NQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSL 354
Query: 260 IEFYCGCEAFDGAMRVY-----------------------------------DRLENPCL 284
I+ Y C + A RV+ DR P
Sbjct: 355 IDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDS 414
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEK 340
+SL+N S+ E + + + + ++ + NS++ YA G ++D+ F +
Sbjct: 415 FVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSR 474
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+P R I+S W++MI G Q+ ++ALQL+ M K+ + T
Sbjct: 475 IPVRGIVS-----------------WSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHIT 517
Query: 401 FSVLFHACSCLGSLQQGQ-LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+ AC+ G + + + ++ + E ++D+ R G + A + +
Sbjct: 518 LVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKM 577
Query: 460 S-SPNVAAWTALMNGYSHH---GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
N W AL+ H LG +A + + LE + + T V + + G+
Sbjct: 578 PFQANALVWGALLGAARIHKNIDLGEQAAEML-LALEPE---KSGTHVLLANIYASVGMW 633
Query: 516 NEGMKIFRSMK 526
++ ++ R MK
Sbjct: 634 DKVARVRRLMK 644
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M L I F + AC+ L G+ +H +V T F+S+ +V SLV +Y++CG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
DA++ F +I +V +W AL + Y H + EAV LF M+ I PN + +++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 509 CVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
C +G KI + G +VD+ + G L +A ++ + D V
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIA-KPDIVS 179
Query: 569 WGALLSAC 576
W A+++ C
Sbjct: 180 WNAIIAGC 187
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I + N + + G + A F ++P+R +VSW+ M+ G ++ E+L L M +
Sbjct: 449 IFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLK 508
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQ-IHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
V N T ++L C + + K + + + G E + + ++ ++E
Sbjct: 509 VGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLE 568
Query: 137 EAKRVFDEL-HEDNELLWSLML 157
A + +++ + N L+W +L
Sbjct: 569 AAMELVNKMPFQANALVWGALL 590
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 220/702 (31%), Positives = 351/702 (50%), Gaps = 92/702 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + + +F +M +R VV+W++M+ Y+ ++ M +N++ N TF +IL
Sbjct: 127 GDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSIL 186
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C + L ++IH +V SG E V + L+ Y+ C EI A +F ++ E N +
Sbjct: 187 KACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVV 246
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ++ Q +++AF+++ KM L +G +
Sbjct: 247 SWTAIIQANAQHRKLNEAFELYEKM----------LQAGIS------------------- 277
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
PN TF S++ +C A G+ +H + + G E D + ALI YC C
Sbjct: 278 ----PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQD 333
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAEL--IFNRLTE-------ANSISYNSMI 322
A +DR+ + + +++I G G + L +F L N +++ S++
Sbjct: 334 ARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSIL 393
Query: 323 KGYAVYGQVD-----------------------------------DSKRLFEKMPHRSII 347
K +V+G ++ +++++F KM +++++
Sbjct: 394 KACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVV 453
Query: 348 SLNTMIS-------------VIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
+ ++++ V EM RN V+WN MI+GY Q+ K +L +M+
Sbjct: 454 AWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEG 513
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
R T + AC L +L++G+L+HA VK ES+ V TSL+ MYS+CG + +A+
Sbjct: 514 FQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEAR 573
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F IS+ + AW A++ GY HG+G EAV LF+ ML++ + PN TF V+SAC RAG
Sbjct: 574 TVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAG 633
Query: 514 LVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
LV EG +IFR M+ + + P +HY C+VDLLGR+G L EAEEFI+ MP E D VW AL
Sbjct: 634 LVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHAL 693
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
L AC N+++ E AA + L+ S YV LSNIYA G+W +RK + +K
Sbjct: 694 LGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLK 753
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
KD G S IE++ R+H F ED +P + I+A LE LT +
Sbjct: 754 KDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMK 795
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/580 (24%), Positives = 250/580 (43%), Gaps = 102/580 (17%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
ET + IT + G++ A +F +M R VVSW ++ ++ K +E+ L
Sbjct: 211 ETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEK 270
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++ + N TF ++L+ C +L G++IH + + G E V + L+ Y C
Sbjct: 271 MLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNC 330
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I++A+ FD + + + + WS M+ GY Q SGY +
Sbjct: 331 IQDARETFDRMSKRDVISWSAMIAGYAQ--------------------------SGY-QD 363
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ ++ +L MR G PN+ TF S+++AC+ GA +G+ +H + K GFE D S
Sbjct: 364 KESLDEVFQLLERMRREGV-FPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRS 422
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+ A+ Y C + A +V+ ++EN + A SL+ I G + AE +F+ ++ N
Sbjct: 423 LQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRN 482
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKM------PHR-SIISLNTMISVIPEME------- 360
+S+N MI GYA G + L M P R +IIS+ + +E
Sbjct: 483 VVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHA 542
Query: 361 ---------------------------------------RNPVTWNSMISGYVQNNLHEK 381
R+ V WN+M++GY Q+ + +
Sbjct: 543 EAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPE 602
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG----QLLHAHLVKTPFESNVYVGT 437
A+ L+ M K + TF+ + AC G +Q+G +++ P + +
Sbjct: 603 AVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHY---G 659
Query: 438 SLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFE------IM 490
+VD+ R G + +A+ + P+++ W AL+ H + V L E +
Sbjct: 660 CMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSH----DNVQLAEWAAHHILR 715
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
LE NA+ +V + + +AG ++ K+ + M G+
Sbjct: 716 LEPS---NASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGL 752
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 215/453 (47%), Gaps = 36/453 (7%)
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
++A++L +++ G + N T+ +I CA+L F +GK+VH L + G D +G +
Sbjct: 60 KEAIQLLGIIKQRGL-LVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNS 118
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN---- 314
LI FY +V+ R+ + +S+I A F R+ +AN
Sbjct: 119 LINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPN 178
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI-------ISLNTMISVIPEM-------- 359
I++ S++K Y ++ ++ + + + +L TM S E+
Sbjct: 179 RITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQ 238
Query: 360 ---ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
ERN V+W ++I Q+ +A +LY M + I TF L ++C+ +L +
Sbjct: 239 KMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNR 298
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +H+H+ + E++V V +L+ MY +C I DA+ +F +S +V +W+A++ GY+
Sbjct: 299 GRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQ 358
Query: 477 HGLGSEAVL-----LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
G + L L E M + + PN TF+ +L AC G + +G +I + G
Sbjct: 359 SGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFE 418
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE-RAAQ 590
T + ++ + G ++EAE+ M + + V W +LL+ M ++ G+ +A+
Sbjct: 419 SDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK-NVVAWASLLT-----MYIKCGDLTSAE 472
Query: 591 KMFG-LDKKPISAYVILSNIYAVLGKWGKKMDI 622
K+F + + + ++ ++ YA G K ++
Sbjct: 473 KVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFEL 505
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 221/711 (31%), Positives = 359/711 (50%), Gaps = 122/711 (17%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+++A ++ ET I N+ I G+ G + AR LFD+M R + SWN+++C ++K
Sbjct: 40 RVHACIIKSPFASETFI--QNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTK 97
Query: 62 ---------------------W----------AKFDESLSLVSTMHRSNVKLNETTFSTI 90
W +FDE+L + MH +NE +F +
Sbjct: 98 SGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSA 157
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
LS CA L L G QIH LV +S Y ++GS L+ Y+ C +E A+ VFDE+ +
Sbjct: 158 LSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSR 217
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W+ ++ Y Q + +A +F++M K V
Sbjct: 218 VSWNSLITCYEQNGPVDEALKIFVEMIKCGV----------------------------- 248
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGALIEFYCGCEAF 269
P+E T SV+ ACA + A EG+ +H ++KC F D +G AL++ Y C
Sbjct: 249 ----EPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKC--- 301
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
RI +A +IF+ + + +S SM+ GYA
Sbjct: 302 ----------------------------NRINEARIIFDMMPIRSVVSETSMVSGYAKAS 333
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
+V ++ +F M M ++ +TWN++I+G QN +E+AL L+ +
Sbjct: 334 KVKVARYMFSNM-----------------MVKDVITWNALIAGCTQNGENEEALILFRLL 376
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF------ESNVYVGTSLVDMY 443
++ ++ T TF L +AC+ L LQ G+ H+H++K F +S+V+VG SL+DMY
Sbjct: 377 KRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMY 436
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
+CGS+ + F + + +W A++ GY+ +G G++A+ +F MLE P+ T +
Sbjct: 437 MKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMI 496
Query: 504 GVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
GVL AC AGL++EG FRSM + +G++P +HYTC+VDLLGR+G+L EA+ I++M +
Sbjct: 497 GVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSM 556
Query: 563 ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
+ DA+VWG+LL+AC N+++GE +K+ +D + YV+LSN+YA W + +
Sbjct: 557 QPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRV 616
Query: 623 RKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
RK + V K PGCSWIE+ ++ F V+D+ + IY L + +
Sbjct: 617 RKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQM 667
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 218/645 (33%), Positives = 332/645 (51%), Gaps = 102/645 (15%)
Query: 28 CGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNETT 86
C R L AR LFDQMP R VVSWN ML GY++ E+ + M ++++ N
Sbjct: 40 CVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWN--- 96
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
G+L Y IE+A+R+F E
Sbjct: 97 -------------------------------------GMLAAYVQNGRIEDARRLF-ESK 118
Query: 147 EDNELL-WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
D EL+ W+ M+ GYV+ N + DA +F +MP++D V W +ISGYA++ + E A +LF
Sbjct: 119 ADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLE-AQRLF 177
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
+S +R A G V +G+L
Sbjct: 178 E---------------ESPVRDVFTWTAMVSGYVQNGML--------------------- 201
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
D A RV+D + + N++I G + R++ A +F + N S+N+MI GY
Sbjct: 202 ----DEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGY 257
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
A G + ++ F++MP +R+ ++W ++I+GY Q+ E+AL L
Sbjct: 258 AQNGDIAQARNFFDRMP-----------------QRDSISWAAIIAGYAQSGYGEEALHL 300
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
++ M++ RSTF+ C+ + +L+ G+ +H +VK ES YVG +L+ MY +
Sbjct: 301 FVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCK 360
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CG+I+DA F I V +W ++ GY+ HG G EA++LFE M + I+P+ T VGV
Sbjct: 361 CGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGV 420
Query: 506 LSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
LSAC GLV++G + F SM + YG+ +HYTC++DLLGR+G L +A+ +K+MP E
Sbjct: 421 LSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEP 480
Query: 565 DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRK 624
DA WGALL A N E+GE+AA+ +F ++ YV+LSN+YA G+WG +R
Sbjct: 481 DAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRL 540
Query: 625 RLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
R+ VKK PG SW+E+ +++H F+V D +P + IY LE L
Sbjct: 541 RMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEEL 585
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/547 (24%), Positives = 223/547 (40%), Gaps = 165/547 (30%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS N ++ +NG + A+ +FD+MP + +SWN ML Y + + +++ L +
Sbjct: 58 ERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFES 117
Query: 75 -----------MHRSNVKLN----------------ETTFSTILSVCAQLNSLIDGKQIH 107
M VK N E +++T++S AQ L++ +++
Sbjct: 118 KADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRL- 176
Query: 108 CLVLKSGYECFE-------FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
FE F + ++ Y ++EA+RVFD + E N + W+ ++ GY
Sbjct: 177 ----------FEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGY 226
Query: 161 VQCNLMSDAFDV-------------------------------FIKMPKKDVVVWTKLIS 189
VQC M A ++ F +MP++D + W +I+
Sbjct: 227 VQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIA 286
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
GYA+S G E+AL LF M+ GE + N TF S + CA + A GK VHG ++K G
Sbjct: 287 GYAQSGYG-EEALHLFVEMKRDGERL-NRSTFTSTLSTCAEIAALELGKQVHGRVVKAGL 344
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
E +G AL+ YC C G I+DA ++F
Sbjct: 345 ESGCYVGNALLVMYCKC-------------------------------GNIDDAYIVFEG 373
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN-TMISVIPEMERNPVTWNS 368
+ E +S+N+MI GYA +G ++ LFE M I+ + TM+ V+
Sbjct: 374 IEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLS----------- 422
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKT 427
ACS G + +G + ++
Sbjct: 423 --------------------------------------ACSHTGLVDKGTEYFYSMTQDY 444
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSEA 483
+N T ++D+ R G ++DAQ ++ P+ A W AL+ HG LG +A
Sbjct: 445 GITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKA 504
Query: 484 V-LLFEI 489
++FE+
Sbjct: 505 AKMIFEM 511
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 154/334 (46%), Gaps = 38/334 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N IT +NG + ARN FD+MP R +SW ++ GY++ +E+L L M R
Sbjct: 247 VSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKR 306
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+LN +TF++ LS CA++ +L GKQ+H V+K+G E +VG+ LL Y C I++
Sbjct: 307 DGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDD 366
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK----KDVVVWTKLISGYAK 193
A VF+ + E + W+ M+ GY + +A +F M K D V ++S A
Sbjct: 367 AYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLS--AC 424
Query: 194 SVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
S G +K + F M + N + +I R G + + L+ FE D
Sbjct: 425 SHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQ---NLMKNMPFEPD 481
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+ GAL+ GA R I+G +G + A++IF +
Sbjct: 482 AATWGALL----------GASR----------------IHGNTELGE-KAAKMIFE-MEP 513
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
NS Y + YA G+ D R+ +M R +
Sbjct: 514 DNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGV 547
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 143/287 (49%), Gaps = 38/287 (13%)
Query: 291 INGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
+ G + + A L+F+++ E + +S+N+M+ GYA G V ++K +F++MP
Sbjct: 37 LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPC------- 89
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
+N ++WN M++ YVQN E A +L+ +++ + ++ C
Sbjct: 90 ----------KNSISWNGMLAAYVQNGRIEDARRLF---------ESKADWELISWNCMM 130
Query: 411 LGSLQQGQLLHAHLV--KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
G +++ +L+ A + + P V T ++ Y++ G + +AQ F +V WT
Sbjct: 131 GGYVKRNRLVDARGIFDRMPERDEVSWNT-MISGYAQNGELLEAQRLFEESPVRDVFTWT 189
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
A+++GY +G+ EA +F+ M E+ N+ ++ +++ V+ +++ ++F +M
Sbjct: 190 AMVSGYVQNGMLDEARRVFDGMPEK----NSVSWNAIIAGYVQCKRMDQARELFEAMPCQ 245
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
V + ++ ++G + +A F MP + D++ W A+++
Sbjct: 246 NV----SSWNTMITGYAQNGDIAQARNFFDRMP-QRDSISWAAIIAG 287
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 241/766 (31%), Positives = 367/766 (47%), Gaps = 123/766 (16%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS NK I ++ +V A F+ MP+R VVSWN+ML GY + + +S+ + M R
Sbjct: 72 VVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGR 131
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + + TF+ IL VC+ L G QIH +V++ G + S LL YA E
Sbjct: 132 AGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVE 191
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK------------------- 178
+ RVF + E N + WS ++ G VQ NL+S A F +M K
Sbjct: 192 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 251
Query: 179 --------------------KDVVVWTKLISGYAKSVDGCEKALKLF----RWMRESGEN 214
D +V T + YAK D + A LF R+S
Sbjct: 252 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAK-CDNMQDAQILFDKSENLNRQSYNA 310
Query: 215 MPNEYT---------------------FD-----SVIRACARLGAFCEGKVVHGLLIKCG 248
M Y+ FD V RACA + EG ++ L IK
Sbjct: 311 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSS 370
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI-----NG--------LI 295
D + A I+ Y C+A A RV+D + + N++I NG +
Sbjct: 371 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 430
Query: 296 SM--GRIEDAELIFNRLTEA---NSISYN--------------------SMIKGYAVYGQ 330
SM RIE E F + +A S+ Y S+I Y+ G
Sbjct: 431 SMLRSRIEPDEFTFGSVLKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 490
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNP--------VTWNSMISGYVQNNLHEKA 382
+++++++ + R+ +S + E+E+ V+WNS+ISGYV E A
Sbjct: 491 IEEAEKIHSRFFQRTNVS-----GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDA 545
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L+ M ++ I + T++ + C+ L S G+ +HA ++K +S+VY+ ++LVDM
Sbjct: 546 QMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDM 605
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
YS+CG ++D++ F + W A++ GY+HHG G EA+ LFE M+ ++I PN TF
Sbjct: 606 YSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 665
Query: 503 VGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+ +L AC GL+++G++ F MK YG+ P L HY+ +VD+LG+SG + A E I++MP
Sbjct: 666 ISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMP 725
Query: 562 IELDAVVWGALLSACWFWM-NMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKM 620
E D V+W LL C N+EV E A + LD + SAY +LSN+YA G W K
Sbjct: 726 FEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVS 785
Query: 621 DIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
D+R+ + ++KK+PGCSW+EL +H F V D+ +P IY L
Sbjct: 786 DLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEEL 831
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 225/484 (46%), Gaps = 25/484 (5%)
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
CA+ +L GKQ H ++ SG+ FV + LL Y N + A VFD + + + W
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ M+ GY + N M A F MP +DVV W ++SGY ++ + K++++F M +G
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETL-KSIEVFVDMGRAGT 134
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
TF +++ C+ L G +HG++++ G + D AL++ Y + F ++
Sbjct: 135 EFDGR-TFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESL 193
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS-IS---YNSMIKGYAVYG 329
RV+ + + +++I G + + A F + + N+ +S Y S+++ A
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 253
Query: 330 QVD-----DSKRLFEKMPHRSIISLNT--MISVIPEMER-----------NPVTWNSMIS 371
++ + L I+ T M + M+ N ++N+MI+
Sbjct: 254 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMIT 313
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
GY Q KAL L+ + + + S +F AC+ + L +G ++ +K+
Sbjct: 314 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSL 373
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+V V + +DMY +C ++ +A F + + +W A++ + +G G E + LF ML
Sbjct: 374 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 433
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
I P+ TF VL AC G + GM+I S+ G+ ++D+ + G +
Sbjct: 434 RSRIEPDEFTFGSVLKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIE 492
Query: 552 EAEE 555
EAE+
Sbjct: 493 EAEK 496
>gi|224126355|ref|XP_002329533.1| predicted protein [Populus trichocarpa]
gi|222870242|gb|EEF07373.1| predicted protein [Populus trichocarpa]
Length = 693
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 219/652 (33%), Positives = 357/652 (54%), Gaps = 32/652 (4%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E IVS N ++ + G+L AR LF++MP R VVSW +MLCG + + E+ L
Sbjct: 61 ERNIVSYNVMLSGYLQCGRLSEARGLFEEMPERNVVSWTSMLCGLADAGRICEARELFKE 120
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M NV +++ +++ + L + +++ + + + + G +A +
Sbjct: 121 MPERNV----VSWNAMVAGLIKNEDLEEARRVFDEIPEKNVVSWNAMIKG----FAENGK 172
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+EEA+ +F+E+ + N + W+ M+ GY + + +A+ F ++P+++VV WT +ISG+ +
Sbjct: 173 MEEARVLFEEMEDRNVITWTTMIAGYCRIGDVREAYCFFCRIPERNVVSWTAMISGFTWN 232
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF--- 251
E AL LF M+ PN TF S+ ACA + GK +H LI G E+
Sbjct: 233 GYYGE-ALLLFLEMKRRSNIAPNGETFISLAYACAGMRFHHLGKQLHAQLIINGLEYEDY 291
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDR-LENPCLNASNSLINGLISMGRIEDAELIFNRL 310
D I +LI Y A D A V+++ L + + + N +ING +G++E A +F+ +
Sbjct: 292 DGRIAKSLIHMYSLFGAMDYAHYVFNKNLNSHAVQSCNHMINGYTRIGQVEKARELFDTI 351
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
++I++ SMI GY G V ++ LFE MP +++ V W SMI
Sbjct: 352 PARDNITWTSMIVGYFDIGNVSEACYLFENMP-----------------DKDSVAWTSMI 394
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
SG VQN L KA + M ST+++LF A + L G+ LH L+KT +
Sbjct: 395 SGLVQNELFLKATSFLLRMLAHGAPPLSSTYAILFGAAGAIAHLDFGRQLHNMLMKTLSD 454
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
++ + SL+ MY++CG I+DA + F+++ ++ +W ++ G +HH L +E + +FE M
Sbjct: 455 CDLILSNSLISMYAKCGEIHDAYSIFTNMIYRDLISWNTMIMGLAHHALANETLKVFETM 514
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGH 549
L+ PN+ TF+G+LSAC AGLV++G K+F++M+ Y + P LEHY +++LLGR+G
Sbjct: 515 LQSGTRPNSVTFLGILSACSHAGLVSQGCKLFKAMRDVYAIQPGLEHYISMINLLGRAGK 574
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFW-MNMEVGERAAQKMFGLDKKPISAYVILSN 608
+ EAEE I +P E + +WGALL C N ++ + AA+++ LD A+V L N
Sbjct: 575 VREAEELILGLPFETNHAIWGALLGVCGVAEKNADIAQHAARRLLELDPLNAPAHVALCN 634
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
IYA GK ++ +RK + V+K PGCSWI LN V F D+ +P +
Sbjct: 635 IYAACGKHIEEQKLRKEMGLKGVRKVPGCSWIVLNGNVCVFLSGDKLDPEAD 686
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 205/464 (44%), Gaps = 98/464 (21%)
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ LL Y+ I+E++ +FD + E N + +++ML GY+QC +S+A +F +MP+++VV
Sbjct: 37 TSLLTKYSRIGFIDESRVLFDIMPERNIVSYNVMLSGYLQCGRLSEARGLFEEMPERNVV 96
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
WT ++ G A + CE A +LF+ M E N ++++++
Sbjct: 97 SWTSMLCGLADAGRICE-ARELFKEMPER-----NVVSWNAMVAG--------------- 135
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
LIK E + A RV+D + + + N++I G G++E+
Sbjct: 136 -LIK-------------------NEDLEEARRVFDEIPEKNVVSWNAMIKGFAENGKMEE 175
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
A ++F + + N I++ +MI GY G V ++ F ++P ERN
Sbjct: 176 ARVLFEEMEDRNVITWTTMIAGYCRIGDVREAYCFFCRIP-----------------ERN 218
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
V+W +MISG+ N + +AL L++ M R+ I TF L +AC+ + G+ LH
Sbjct: 219 VVSWTAMISGFTWNGYYGEALLLFLEMKRRSNIAPNGETFISLAYACAGMRFHHLGKQLH 278
Query: 422 AHLVKTPFESNVYVG---TSLVDMYS--------------------------------RC 446
A L+ E Y G SL+ MYS R
Sbjct: 279 AQLIINGLEYEDYDGRIAKSLIHMYSLFGAMDYAHYVFNKNLNSHAVQSCNHMINGYTRI 338
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G + A+ F +I + + WT+++ GY G SEA LFE M ++D V + ++
Sbjct: 339 GQVEKARELFDTIPARDNITWTSMIVGYFDIGNVSEACYLFENMPDKDSV----AWTSMI 394
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
S V+ L + M ++G P Y + G HL
Sbjct: 395 SGLVQNELFLKATSFLLRMLAHGAPPLSSTYAILFGAAGAIAHL 438
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 215/491 (43%), Gaps = 122/491 (24%)
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
+L+ Y D + ++D + + + N +++G + GR+ +A +F + E N +S
Sbjct: 38 SLLTKYSRIGFIDESRVLFDIMPERNIVSYNVMLSGYLQCGRLSEARGLFEEMPERNVVS 97
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEM-ERNP 363
+ SM+ G A G++ +++ LF++MP R+++S N M++ V E+ E+N
Sbjct: 98 WTSMLCGLADAGRICEARELFKEMPERNVVSWNAMVAGLIKNEDLEEARRVFDEIPEKNV 157
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
V+WN+MI G+ +N E+A L+ M DR
Sbjct: 158 VSWNAMIKGFAENGKMEEARVLFEEME----DR--------------------------- 186
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
NV T+++ Y R G + +A F I NV +WTA+++G++ +G EA
Sbjct: 187 --------NVITWTTMIAGYCRIGDVREAYCFFCRIPERNVVSWTAMISGFTWNGYYGEA 238
Query: 484 VLLF-EIMLEQDIVPNAATFVGVLSAC-----------VRAGLVNEGM-------KIFRS 524
+LLF E+ +I PN TF+ + AC + A L+ G+ +I +S
Sbjct: 239 LLLFLEMKRRSNIAPNGETFISLAYACAGMRFHHLGKQLHAQLIINGLEYEDYDGRIAKS 298
Query: 525 M-KSYGVVPTLE--HY------------TC--VVDLLGRSGHLHEAEEFIKDMPIELDAV 567
+ Y + ++ HY +C +++ R G + +A E +P D +
Sbjct: 299 LIHMYSLFGAMDYAHYVFNKNLNSHAVQSCNHMINGYTRIGQVEKARELFDTIPAR-DNI 357
Query: 568 VWGALL----------SACWFWMNMEVGERAA--QKMFGLDKKPI----SAYVI------ 605
W +++ AC+ + NM + A + GL + + +++++
Sbjct: 358 TWTSMIVGYFDIGNVSEACYLFENMPDKDSVAWTSMISGLVQNELFLKATSFLLRMLAHG 417
Query: 606 ---LSNIYAVL-GKWG--KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS----VEDRN 655
LS+ YA+L G G +D ++L ++ +K C I NS + ++ + D
Sbjct: 418 APPLSSTYAILFGAAGAIAHLDFGRQLHNMLMKTLSDCDLILSNSLISMYAKCGEIHDAY 477
Query: 656 NPNCNVIYATL 666
+ N+IY L
Sbjct: 478 SIFTNMIYRDL 488
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
LQQ + L + S + TSL+ YSR G I++++ F + N+ ++ +++G
Sbjct: 14 LQQARNLLDKFPERSRHSRIAHWTSLLTKYSRIGFIDESRVLFDIMPERNIVSYNVMLSG 73
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT 533
Y G SEA LFE M E+++V ++ +L AG + E ++F+ M VV
Sbjct: 74 YLQCGRLSEARGLFEEMPERNVV----SWTSMLCGLADAGRICEARELFKEMPERNVVS- 128
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ +V L ++ L EA ++P E + V W A++
Sbjct: 129 ---WNAMVAGLIKNEDLEEARRVFDEIP-EKNVVSWNAMIKG 166
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 224/701 (31%), Positives = 362/701 (51%), Gaps = 63/701 (8%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH---------------RSNVK 81
A +FD MP R VSWN ML GY+ + L M R
Sbjct: 96 AFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTV 155
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF----EIEE 137
+ TTF+ +L C+ L G QIH L +K G++C GS LL YA C ++
Sbjct: 156 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRG 215
Query: 138 AKRVFDELHE------------------DNELLWSLMLVGYVQCNLMSDAFD-VFIKMPK 178
+F E+ + + ++ + L Y++CN +SD + +F +P
Sbjct: 216 GLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPN 275
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
++ + +I GYA+S G E AL +FR +++SG + +E + RACA + EG
Sbjct: 276 HNLQSYNAIIVGYARSDKGIE-ALGMFRLLQKSGLGL-DEVSLSGAXRACAVIKGDLEGL 333
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
VHGL +K + + + A+++ Y C A A V++ + + + N++I G
Sbjct: 334 QVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNG 393
Query: 299 RIEDAELIF----NRLTEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHR 344
E +F E + +Y S++K G ++ ++ S+ +
Sbjct: 394 NEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGI 453
Query: 345 SIISLNTMISVIPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
++I + + ++ + E+ V+WN++ISG+ E+A + + M ++ +D
Sbjct: 454 ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 513
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
T++ + C+ L +++ G+ +HA ++K +S+ Y+ ++LVDMYS+CG++ D Q F
Sbjct: 514 DNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIF 573
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+ + W A++ GY+ HGLG EA+ +FE M +++ PN ATF+ VL AC GLV
Sbjct: 574 EKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVE 633
Query: 517 EGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+G+ F SM S YG+ P LEHY+CVVD++GRSG + +A E I+ MP E DAV+W LLS
Sbjct: 634 KGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSX 693
Query: 576 CWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
C N+EV E+AA + L+ + +AYV+LSNIYA G W + +RK + +KK+P
Sbjct: 694 CKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEP 753
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
GCSWIE+ S VHAF V D+ +P IY L+ LT + V
Sbjct: 754 GCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWV 794
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 145/606 (23%), Positives = 268/606 (44%), Gaps = 79/606 (13%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
T+R+LF PIR ++ SK +S S+ + K + TFS I C+
Sbjct: 5 TSRHLF---PIRFFFNFQ------SKSPFKTLPISPFSSYQATPTK--KKTFSHIFQECS 53
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+L GKQ H ++ + ++ FV + L+ Y C ++ A +VFD + + + + W+
Sbjct: 54 DRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNA 113
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
ML GY + A +F MP GC ++LF + +
Sbjct: 114 MLFGYAGRGDIGVAQKLFDAMPGT-----------------GC-GVVELFDFRMGRMGTV 155
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC----EAFDG 271
+ TF V+++C+ L G +HGL +K GF+ D G AL++ Y C + G
Sbjct: 156 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRG 215
Query: 272 AMRVYDRLENPCLNA----SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAV 327
+ ++ ++ + A ++L + I A L + + N++S
Sbjct: 216 GLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATL--DMYMKCNNLS---------- 263
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
D S +LF +P+ ++ S +N++I GY +++ +AL ++
Sbjct: 264 ----DCSNQLFNSLPNHNLQS-----------------YNAIIVGYARSDKGIEALGMFR 302
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
++K + + S AC+ + +G +H +K+ +SN+ V +++DMY +CG
Sbjct: 303 LLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCG 362
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
++ +A F + S + +W A++ + +G + + LF ML+ + P+ T+ VL
Sbjct: 363 ALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLK 422
Query: 508 ACVRAGLVNEGMKIF-RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
AC +N GM+I R +KS + + ++D+ + G + +AE+ + D E
Sbjct: 423 ACAGWQALNCGMEIHNRIIKSRMGLDSFVGIA-LIDMYSKCGMMEKAEK-LHDRLAEQTV 480
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMF--GLDKKPISAYVIL---SNIYAV-LGKWGKKM 620
V W A++S E ++ KM G+D + IL +N+ V LGK
Sbjct: 481 VSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQ 540
Query: 621 DIRKRL 626
I+K L
Sbjct: 541 IIKKEL 546
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 206/477 (43%), Gaps = 84/477 (17%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I N + G+ G LV A +F++M R VSWN ++ + + +++LSL M +
Sbjct: 348 ICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQ 407
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S ++ +E T+ ++L CA +L G +IH ++KS FVG L+ Y+ C +E+
Sbjct: 408 SGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEK 467
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+++ D L E + VV W +ISG++
Sbjct: 468 AEKLHDRLAE-------------------------------QTVVSWNAIISGFSLQKQS 496
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E+A K F M E G + P+ +T+ +++ CA L GK +H +IK + D I
Sbjct: 497 -EEAQKTFSKMLEMGVD-PDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISS 554
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
L++ Y C G ++D +LIF + + ++
Sbjct: 555 TLVDMYSKC-------------------------------GNMQDFQLIFEKAPNRDFVT 583
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+N+M+ GYA +G +++ ++FE M + ++ N T+ +++
Sbjct: 584 WNAMVCGYAQHGLGEEALKIFEYMQ-------------LENVKPNHATFLAVLRACGHMG 630
Query: 378 LHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
L EK L + +M +D +S + G + + L + PFE++ +
Sbjct: 631 LVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL---IEGMPFEADAVIW 687
Query: 437 TSLVDMYSRCGSINDAQASFSSI---SSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+L+ G++ A+ + SI + AA+ L N Y++ G+ +E L ++M
Sbjct: 688 RTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMM 744
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 214/646 (33%), Positives = 336/646 (52%), Gaps = 63/646 (9%)
Query: 54 TMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS 113
++LC K + E+L +++TM ++ F +L CA+L SL G+++H +LKS
Sbjct: 69 SILC---KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKS 125
Query: 114 GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
G + N L + +L Y +C ++DA VF
Sbjct: 126 GIQ-------------------------------PNRYLENTLLSMYAKCGSLTDARRVF 154
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
+ +++V WT +I + E A K + M+ +G P++ TF S++ A
Sbjct: 155 DGIRDRNIVSWTAMIEAFVAGNQNLE-AYKCYETMKLAG-CKPDKVTFVSLLNAFTNPEL 212
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
G+ VH + K G E + +G +L+ Y C A ++D+L + LI G
Sbjct: 213 LQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAG 272
Query: 294 LISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPH----RS 345
G+++ A + ++ +A N I+Y S+++G ++ K++ + R
Sbjct: 273 YAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGRE 332
Query: 346 IISLNTMISV----------------IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
I +N +I++ +P R+ VTW +M++GY Q H++A+ L+ M
Sbjct: 333 IWVVNALITMYCKCGGLKEARKLFGDLPH--RDVVTWTAMVTGYAQLGFHDEAIDLFRRM 390
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
++ I + TF+ +CS LQ+G+ +H LV + +VY+ ++LV MY++CGS+
Sbjct: 391 QQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSM 450
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+DA+ F+ +S NV AWTA++ G + HG EA+ FE M +Q I P+ TF VLSAC
Sbjct: 451 DDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSAC 510
Query: 510 VRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
GLV EG K FRSM YG+ P +EHY+C VDLLGR+GHL EAE I MP + V
Sbjct: 511 THVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSV 570
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
WGALLSAC ++E GERAA+ + LD AYV LSNIYA G++ +R+ +
Sbjct: 571 WGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEK 630
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+V K+PG SWIE++ +VH F VED+++P IYA L LT +
Sbjct: 631 RDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIK 676
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/534 (22%), Positives = 236/534 (44%), Gaps = 58/534 (10%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N ++ + G L AR +FD + R +VSW M+ + + E+ TM + K
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ TF ++L+ L G+++H + K+G E VG+ L+ YA C +I +A+ +
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVI 254
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD+L E N + W+L++ GY Q + A ++ KM + +V
Sbjct: 255 FDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVA------------------- 295
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
PN+ T+ S+++ C A GK VH +I+ G+ + + ALI
Sbjct: 296 --------------PNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALIT 341
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSIS 317
YC C A +++ L + + +++ G +G ++A +F R+ + + ++
Sbjct: 342 MYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMT 401
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPH----------RSIISLNTMISVIPEM-------- 359
+ S + + + + K + +++ H +++S+ + +
Sbjct: 402 FTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMS 461
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
ERN V W +MI+G Q+ +AL+ + M+K I + TF+ + AC+ +G +++G+
Sbjct: 462 ERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 521
Query: 420 -LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
+ + + V + VD+ R G + +A+ ++ P + W AL++ H
Sbjct: 522 HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIH 581
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
E +L+ D + A +V + + AG + K+ + M+ VV
Sbjct: 582 SDVERGERAAENVLKLDPDDDGA-YVALSNIYAAAGRYEDAEKVRQVMEKRDVV 634
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 227/672 (33%), Positives = 357/672 (53%), Gaps = 67/672 (9%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
+FD+MP R VS+ T++ GY++ KF E+ L + +H +LN F+T+L + +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
G+ +H VLK GY F+G+ L+ Y+ + A+ VFDE+
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEI-------------- 107
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
KD+V WT +I+ YA++ D +AL+ F MR +G PN +
Sbjct: 108 -----------------SSKDMVSWTGMIASYAEN-DCFSEALEFFSQMRVAGFK-PNNF 148
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
TF V++AC L F GK VH ++K +E D +G L+E Y C D A R + +
Sbjct: 149 TFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDM 208
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSK 335
+ + +I+ G+ E A IF ++ A N +++S+++ A +D SK
Sbjct: 209 PKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSK 268
Query: 336 RLFEKMPHRSIISLNTMIS------------VIPEME-------RNPVTWNSMISGYVQN 376
+ ++ +S + +S + ME RN V+WN++I YVQ
Sbjct: 269 TI-HGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQL 327
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
E+AL L+ M + + T T+S + AC+ L +L+ G +H KT + +V VG
Sbjct: 328 GDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVG 387
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+L+DMY++CGSI DA+ F + + +W A++ GYS HGLG EA+ +F +M E
Sbjct: 388 NALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCK 447
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P+ TFVGVLSAC G ++EG + F SMK YG+ P +EHYTC+V L+GRSG+L +A +
Sbjct: 448 PDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVK 507
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
FI+D+P E ++W ALL AC ++E+G +AQ++ L+ + +++V+LSNIYA +
Sbjct: 508 FIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARR 567
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL------ 669
WG +RK + VKK+PG SWIE VH F+V D ++ + +I LE L
Sbjct: 568 WGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRK 627
Query: 670 ---TANLNSVVL 678
+ LN+V+L
Sbjct: 628 AGYSPQLNAVLL 639
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 213/471 (45%), Gaps = 57/471 (12%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
+G + AR +FD++ + +VSW M+ Y++ F E+L S M + K N TF+ +
Sbjct: 94 SGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGV 153
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L C L + GK +HC VLK+ YE +VG GLL Y C + ++A R F ++ +++
Sbjct: 154 LKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDV 213
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ WS M+ + Q A ++F +M + V+
Sbjct: 214 IPWSFMISRFAQSGQSEKALEIFCQMRRAFVI---------------------------- 245
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
PN++TF SV++A A + + K +HG +K G D + AL+ Y C +
Sbjct: 246 -----PNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYA 326
+M +++ L + + N++I + +G E A +F+ + +A ++Y+S+++ A
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360
Query: 327 VYGQVD--------DSKRLFEK--MPHRSIISLNTMISVIPEME--------RNPVTWNS 368
++ +K ++ + ++I + I + R+ V+WN+
Sbjct: 361 TLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNA 420
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT- 427
+I GY + L +A++++ M++ TF + ACS G L +G+ + +
Sbjct: 421 IICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDY 480
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
E + T +V + R G+++ A I P+V W AL+ H
Sbjct: 481 GIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIH 531
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 149/322 (46%), Gaps = 40/322 (12%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
T CG N A F MP V+ W+ M+ +++ + +++L + M R+ V N+
Sbjct: 193 TRCGDNDD---AWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQF 249
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TFS++L A + SL K IH LK+G FV + L+ YA C IE++ +F+ L
Sbjct: 250 TFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEAL 309
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ N++ W+ ++V YVQ DG E+AL LF
Sbjct: 310 SDRNDVSWNTIIVSYVQLG-------------------------------DG-ERALSLF 337
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M + E T+ S++RACA L A G VH L K + D ++G ALI+ Y
Sbjct: 338 SNMLRY-QVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAK 396
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSM 321
C + A ++D L+ + N++I G G +A +FN + E + +++ +
Sbjct: 397 CGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGV 456
Query: 322 IKGYAVYGQVDDSKRLFEKMPH 343
+ + G++D+ K+ F M
Sbjct: 457 LSACSNTGRLDEGKQYFTSMKQ 478
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 34/221 (15%)
Query: 19 VSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
V + A+ C + G + + LF+ + R VSWNT++ Y + + +LSL S M R
Sbjct: 283 VFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLR 342
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V+ E T+S+IL CA L +L G Q+HCL K+ Y VG+ L+ YA C I++
Sbjct: 343 YQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKD 402
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ +FD L +++ W+ ++ GY L G
Sbjct: 403 ARFMFDMLDLRDKVSWNAIICGYSMHGL-------------------------------G 431
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
E A+K+F M+E+ + P+E TF V+ AC+ G EGK
Sbjct: 432 VE-AIKMFNLMKET-KCKPDELTFVGVLSACSNTGRLDEGK 470
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
++++ ++T+ Q+ + N I + G + AR +FD + +R VSWN ++CGYS
Sbjct: 369 LQVHCLTAKTIYGQDVAV--GNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYS 426
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQ 105
E++ + + M + K +E TF +LS C+ L +GKQ
Sbjct: 427 MHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ 471
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 216/669 (32%), Positives = 345/669 (51%), Gaps = 56/669 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I N IT R G A +F MP R V++NT++ G+++ + +L + M
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S + + T S++L+ CA L L G Q+H + K+G + LL Y C ++E
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVET 297
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F+ N +LW+LMLV + Q N ++ +F++F +M +
Sbjct: 298 ALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI---------------- 341
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
PN++T+ ++R C G+ +H L +K GFE D + G
Sbjct: 342 -----------------RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSG 384
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----- 312
LI+ Y + A RV + L+ + + S+I G + +DA F + +
Sbjct: 385 VLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWP 444
Query: 313 -----ANSIS----YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL-------NTMISVI 356
A++IS N+M +G ++ ++ S + ++++L S
Sbjct: 445 DNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSF 504
Query: 357 PEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
EME ++ +T N ++SG+ Q+ LHE+AL+++M M + + TF A + L ++
Sbjct: 505 EEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIK 564
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
QG+ +HA ++KT VG +L+ +Y +CGS DA+ FS +S N +W ++ S
Sbjct: 565 QGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCS 624
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTL 534
HG G EA+ LF+ M ++ I PN TF+GVL+AC GLV EG+ F+SM YG+ P
Sbjct: 625 QHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRP 684
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
+HY CV+D+ GR+G L A++FI++MPI DA+VW LLSAC N+EVGE AA+ +
Sbjct: 685 DHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLE 744
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
L+ ++YV+LSN YAV KW + +RK + V+K+PG SWIE+ + VHAF V DR
Sbjct: 745 LEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDR 804
Query: 655 NNPNCNVIY 663
+P IY
Sbjct: 805 LHPLAEQIY 813
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 139/572 (24%), Positives = 258/572 (45%), Gaps = 62/572 (10%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+NG ++ AR +F+++ R VSW ML GY++ +E+L L MHR+ V S+
Sbjct: 89 KNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS 148
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C + G+ IH K G+ FVG+ ++ Y C A+RVF ++ +
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ ++ ++ G+ QC G+ E AL++F M+
Sbjct: 209 TVTFNTLISGHAQC--------------------------GHG------EHALEIFEEMQ 236
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
SG + P+ T S++ ACA LG +G +H L K G D + G+L++ Y C
Sbjct: 237 FSGLS-PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDV 295
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-------ANSISYNSMI 322
+ A+ +++ + + N + L++ G+I D F + N +Y ++
Sbjct: 296 ETALVIFNSSDRTNVVLWNLM---LVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCIL 352
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPV 364
+ ++D +++ S + V+ +M E++ V
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+W SMI+GYVQ+ + AL + M+K I + C+ + +++QG +HA +
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
+ + +V + +LV++Y+RCG I +A +SF + + L++G++ GL EA+
Sbjct: 473 YVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEAL 532
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
+F M + + N TFV LSA + +G +I + G E ++ L
Sbjct: 533 KVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLY 592
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
G+ G +A+ +M E + V W ++++C
Sbjct: 593 GKCGSFEDAKMEFSEMS-ERNEVSWNTIITSC 623
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 159/681 (23%), Positives = 284/681 (41%), Gaps = 88/681 (12%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
M R S L G+ + LSL + R + L F+ L C +G
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRG-----NG 55
Query: 104 K------QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
+ +IH + G + VG+ L+ Y+ + A+RVF+EL
Sbjct: 56 RRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL------------ 103
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
+D V W ++SGYA++ G E+AL L+R M +G +P
Sbjct: 104 -------------------SARDNVSWVAMLSGYAQNGLG-EEALGLYRQMHRAGV-VPT 142
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
Y SV+ +C + F +G+++H K GF + +G A+I Y C +F A RV+
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDD 333
+ + N+LI+G G E A IF + + ++ +S++ A G +
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 334 SKRLFEKMPHRSIIS-----------------LNTMISVIPEMER-NPVTWNSMISGYVQ 375
+L + I S + T + + +R N V WN M+ + Q
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N K+ +L+ M+ I + T+ + C+C + G+ +H+ VKT FES++YV
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
L+DMYS+ G + A+ + +V +WT+++ GY H +A+ F+ M + I
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P+ +S C + +G++I + G + + +V+L R G + EA
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFS 502
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP--------ISAYVILS 607
++M ++ D + L+S + + E A + +D+ +SA +
Sbjct: 503 SFEEMELK-DGITGNGLVSG---FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASA 558
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF--------SVEDRNNPNC 659
N+ + K GK++ R T + + G + I L + +F + +RN +
Sbjct: 559 NLAEI--KQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSW 616
Query: 660 NVIYATLEHLTANLNSVVLFD 680
N I + L ++ LFD
Sbjct: 617 NTIITSCSQHGRGLEALDLFD 637
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 233/688 (33%), Positives = 350/688 (50%), Gaps = 61/688 (8%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N + + G L +R LF + R VVSWN + Y + E++ L M RS +
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGI 179
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
NE + S IL+ CA L G++IH L+LK G + +F + L+ Y+ EIE A
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVA 239
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF ++ DVV W +I+G D +
Sbjct: 240 VFQDI-------------------------------AHPDVVSWNAIIAGCVLH-DCNDL 267
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL L M+ SG PN +T S ++ACA +G G+ +H LIK D L+
Sbjct: 268 ALMLLDEMKGSGTR-PNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLV 326
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSI 316
+ Y CE D A R YD + + A N+LI+G G DA +F+++ + N
Sbjct: 327 DMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQT 386
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS----LNTMISV------IPEMER----- 361
+ ++++K A + K++ I S +N+++ I E +
Sbjct: 387 TLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEER 446
Query: 362 ---NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+ V + SMI+ Y Q E+AL+LY+ M+ I S L +AC+ L + +QG+
Sbjct: 447 TWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGK 506
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
LH H +K F +++ SLV+MY++CGSI DA +FS I + + +W+A++ GY+ HG
Sbjct: 507 QLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHG 566
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHY 537
G EA+ LF ML + PN T V VL AC AGLVNEG + F M+ +G+ PT EHY
Sbjct: 567 HGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHY 626
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
C++DLLGRSG L+EA E + +P E D VWGALL A N+E+G++AA+ +F L+
Sbjct: 627 ACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEP 686
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+ +V+L+NIYA G W +RK + +VKK+PG SWIE+ +V+ F V DR++
Sbjct: 687 EKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHS 746
Query: 658 NCNVIYATLEHL-----TANLNSVVLFD 680
+ IYA L+ L A +S+V D
Sbjct: 747 RSDEIYAKLDQLGDLLSKAGYSSIVEID 774
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 145/589 (24%), Positives = 270/589 (45%), Gaps = 93/589 (15%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
++C R G AR L D+ VVSW+++L GY + +E+L + + M VK NE
Sbjct: 27 SKCRRFGY---ARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEF 83
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TF ++L C+ L G+++H + + +G+E FV + L+ YA C +++++R+F +
Sbjct: 84 TFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGI 143
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
E N + W+ + YVQ L C +A+ LF
Sbjct: 144 VERNVVSWNALFSCYVQSEL--------------------------------CGEAVGLF 171
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
+ M SG MPNE++ ++ ACA L G+ +HGL++K G + D+ AL++ Y
Sbjct: 172 KEMVRSG-IMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSK 230
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSM 321
+GA+ V+ + +P + + N++I G + + A ++ + + T N + +S
Sbjct: 231 AGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSA 290
Query: 322 IKGYAVYG-----------------------------------QVDDSKRLFEKMPHRSI 346
+K A G +DD++R ++ MP + I
Sbjct: 291 LKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDI 350
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
I+ WN++ISGY Q H A+ L+ M ID ++T S +
Sbjct: 351 IA-----------------WNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLK 393
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
+ + L +++ + +H +K+ S+ YV SL+D Y +C I++A F + ++ A
Sbjct: 394 SVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVA 453
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
+T+++ YS +G G EA+ L+ M + DI P+ +L+AC +G ++
Sbjct: 454 YTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAI 513
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+G + + +V++ + G + +A+ ++P V W A++
Sbjct: 514 KFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIP-NRGIVSWSAMIGG 561
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 227/517 (43%), Gaps = 56/517 (10%)
Query: 105 QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
++H ++K G+ + + L+ Y+ C A+++ DE E + + WS +L GYVQ
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
+ +A VF +M C +K NE+TF SV
Sbjct: 62 FVEEALLVFNEM---------------------CLLGVKC------------NEFTFPSV 88
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
++AC+ G+ VHG+ + GFE D + L+ Y C D + R++ + +
Sbjct: 89 LKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNV 148
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEK 340
+ N+L + + +A +F + + N S + ++ A + D +++
Sbjct: 149 VSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGL 208
Query: 341 M-------PHRSIISLNTMISVIPEME-----------RNPVTWNSMISGYVQNNLHEKA 382
M S +L M S E+E + V+WN++I+G V ++ ++ A
Sbjct: 209 MLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLA 268
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L L M+ T S AC+ +G + G+ LH+ L+K S+++ LVDM
Sbjct: 269 LMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDM 328
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
YS+C ++DA+ ++ S+ ++ AW AL++GYS G +AV LF M +DI N T
Sbjct: 329 YSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTL 388
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
VL + + +I G+ ++D G+ H+ EA + ++
Sbjct: 389 STVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTW 448
Query: 563 ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
E D V + ++++A + + E + +M D KP
Sbjct: 449 E-DLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKP 484
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 125/556 (22%), Positives = 226/556 (40%), Gaps = 100/556 (17%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N + + G++ A +F + VVSWN ++ G D +L L+ M S
Sbjct: 220 SANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSG 279
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ N T S+ L CA + G+Q+H ++K F GL+ Y+ C +++A+
Sbjct: 280 TRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDAR 339
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
R +D + + + + W+ ++ GY QC DA +F KM +D+
Sbjct: 340 RAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDF---------------- 383
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
N+ T +V+++ A L A K +H + IK G D + +L
Sbjct: 384 -----------------NQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSL 426
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----- 314
++ Y C D A ++++ L A S+I G E+A ++ ++ +A+
Sbjct: 427 LDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDP 486
Query: 315 -------------------------SISY---------NSMIKGYAVYGQVDDSKRLFEK 340
+I + NS++ YA G ++D+ R F +
Sbjct: 487 FICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSE 546
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+P+R I+S W++MI GY Q+ ++AL+L+ M + + T
Sbjct: 547 IPNRGIVS-----------------WSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHIT 589
Query: 401 FSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+ AC+ G + +G Q V + ++D+ R G +N+A +SI
Sbjct: 590 LVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSI 649
Query: 460 S-SPNVAAWTALMNGYSHHG---LGSEAV-LLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
+ W AL+ H LG +A +LF++ E+ + T V + + AG+
Sbjct: 650 PFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEK-----SGTHVLLANIYASAGM 704
Query: 515 VNEGMKIFRSMKSYGV 530
K+ + MK V
Sbjct: 705 WENVAKVRKFMKDSKV 720
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I ++N + + G + A F ++P R +VSW+ M+ GY++ E+L L + M R
Sbjct: 521 IFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLR 580
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQ 105
V N T ++L C + +GKQ
Sbjct: 581 DGVPPNHITLVSVLCACNHAGLVNEGKQ 608
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 207/667 (31%), Positives = 360/667 (53%), Gaps = 55/667 (8%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIR----TVVSWNTMLCGYSKWAKFDE 67
MTQ+ VS N IT C NG + A +L + M + VV+W+ ++ G+S A E
Sbjct: 195 MTQKD-CVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVE 253
Query: 68 SLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLF 127
S+ L + M + V + T +++L C+++ L GK++H +++ FV + L+
Sbjct: 254 SVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVG 313
Query: 128 FYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK----KDVVV 183
Y C +++ A ++F + ++ M+VGY++ + A ++F +M + +D +
Sbjct: 314 MYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRIS 373
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
W +ISG+ + + AL LFR + G P+ +T S++ A + +GK +H +
Sbjct: 374 WNCMISGHVDNF-MFDDALMLFRDLLMEGIE-PDSFTLGSILTGFADMTCIRQGKEIHSI 431
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA 303
I G + + +GGAL+E YC C N +I+ A
Sbjct: 432 AIVKGLQSNSFVGGALVEMYCKC-------------------------NDIIA------A 460
Query: 304 ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP 363
++ F+ ++E ++ ++N++I GYA Q+ + L E+M E N
Sbjct: 461 QMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGF-------------EPNV 507
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
TWNS+++G V+N ++ A+QL+ M+ ++ T ++ ACS L ++ +G+ +HA+
Sbjct: 508 YTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAY 567
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
++ ++S+ ++G +LVDMY++CGSI ++ IS+PN+ A++ Y+ HG G E
Sbjct: 568 SIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEG 627
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
+++F ML+ + P+ TF+ VLS+CV AG + G + F M++Y + PTL+HYTC+VDL
Sbjct: 628 IVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMETYNITPTLKHYTCMVDL 687
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
L R+G L EA + IK+MP+E D+V W ALL C+ + +GE AA+K+ L+ Y
Sbjct: 688 LSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNY 747
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
V+L+N+YA G+W R+ + ++K PGCSWIE VH F D+++ IY
Sbjct: 748 VLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEEIY 807
Query: 664 ATLEHLT 670
L++LT
Sbjct: 808 FMLDNLT 814
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 196/451 (43%), Gaps = 78/451 (17%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
L TT+STIL NSL GKQ+H +K+G+ FV + LL Y+ E+A +
Sbjct: 32 LTSTTYSTILQSS---NSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHM 88
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD++ N W+ +L ++ L F +F + DG +
Sbjct: 89 FDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFL-----------------CDGLGEK 131
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
L F F V+ C LG G+ VHG+++K GF + +G ALI+
Sbjct: 132 LDFF--------------VFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALID 177
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
Y C G +++A+ + +T+ + +S+NS+
Sbjct: 178 MYGKC-------------------------------GSLDEAKKVLEGMTQKDCVSWNSI 206
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK 381
I G V ++ L E M ++ E+E N VTW+++I G+ N +
Sbjct: 207 ITACVANGVVYEALDLLENM-------------LLSELEPNVVTWSAVIGGFSSNAYDVE 253
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
+++L+ M + T + + ACS + L G+ LH ++V+ SN +V +LV
Sbjct: 254 SVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVG 313
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY RCG + A FS + A++ ++ GY +G +A LF M ++ + + +
Sbjct: 314 MYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRIS 373
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
+ ++S V + ++ + +FR + G+ P
Sbjct: 374 WNCMISGHVDNFMFDDALMLFRDLLMEGIEP 404
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 96/182 (52%), Gaps = 6/182 (3%)
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
T +T+S + + + SL G+ LH+H +KT F ++ +V T L+ MYS S DA F
Sbjct: 33 TSTTYSTILQSSN---SLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMF 89
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG--VLSACVRAGL 514
++ N+ +WTA++ + + GL + +LFE L + FV VL+ C G
Sbjct: 90 DKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGD 149
Query: 515 VNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+ G ++ + +G V + ++D+ G+ G L EA++ ++ M + D V W ++++
Sbjct: 150 LELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGM-TQKDCVSWNSIIT 208
Query: 575 AC 576
AC
Sbjct: 209 AC 210
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 216/652 (33%), Positives = 348/652 (53%), Gaps = 67/652 (10%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N I+ RN + AR+LFD+MP R + SWN ML GY + + E+ L M +
Sbjct: 78 VSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKK 137
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+V +++ +LS AQ N +D + V +GLL Y + ++EA
Sbjct: 138 DV----VSWNAMLSGYAQ-NGFVDEAR---EVFNKMPHRNSISWNGLLAAYVHNGRLKEA 189
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+R+F+ + W+ ++ GYV+ N++ DA +F +MP +DV+ W +ISGYA+ V
Sbjct: 190 RRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQ-VGDL 248
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+A +LF +S IR A G V +G++ + FDE
Sbjct: 249 SQAKRLFN---------------ESPIRDVFTWTAMVSGYVQNGMVDEARKYFDE----- 288
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
M V + + + N+++ G + ++ A +F + N S+
Sbjct: 289 --------------MPVKNEI------SYNAMLAGYVQYKKMVIAGELFEAMPCRNISSW 328
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+MI GY G + +++LF+ MP +R+ V+W ++ISGY QN
Sbjct: 329 NTMITGYGQNGGIAQARKLFDMMP-----------------QRDCVSWAAIISGYAQNGH 371
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+E+AL +++ M++ RSTFS C+ + +L+ G+ +H +VK FE+ +VG +
Sbjct: 372 YEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNA 431
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+ MY +CGS ++A F I +V +W ++ GY+ HG G +A++LFE M + + P+
Sbjct: 432 LLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPD 491
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
T VGVLSAC +GL++ G + F SM + Y V PT +HYTC++DLLGR+G L EAE +
Sbjct: 492 EITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLM 551
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
++MP + A WGALL A N E+GE+AA+ +F ++ + YV+LSN+YA G+W
Sbjct: 552 RNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWV 611
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+R ++ V+K G SW+E+ +++H FSV D +P + IYA LE L
Sbjct: 612 DVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEEL 663
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 147/325 (45%), Gaps = 68/325 (20%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I S N IT G+NG + AR LFD MP R VSW ++ GY++ ++E+L++ M R
Sbjct: 325 ISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKR 384
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
N +TFS LS CA + +L GKQ+H V+K+G+E FVG+ LL Y C +E
Sbjct: 385 DGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDE 444
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A VF+ + E + + W+ M+ GY + G+ +
Sbjct: 445 ANDVFEGIEEKDVVSWNTMIAGYAR--------------------------HGFGR---- 474
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+AL LF M+++G P+E T V+ AC+ H LI G E+
Sbjct: 475 --QALVLFESMKKAGVK-PDEITMVGVLSACS-----------HSGLIDRGTEY------ 514
Query: 258 ALIEFYCGCEAFDGAMRVYDRLEN--PCLNASNSLINGLISMGRIEDAE-LIFNRLTEAN 314
FY DR N P +I+ L GR+E+AE L+ N +
Sbjct: 515 ----FYS-----------MDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPG 559
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFE 339
+ S+ +++ ++G + ++ E
Sbjct: 560 AASWGALLGASRIHGNTELGEKAAE 584
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 157/322 (48%), Gaps = 35/322 (10%)
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
D A+RV++ + + N++I+G + + A +F+++ E + S+N M+ GY
Sbjct: 63 DSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNR 122
Query: 330 QVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQ 375
++ ++ +LF+ MP + ++S N M+S V +M RN ++WN +++ YV
Sbjct: 123 RLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVH 182
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV--KTPFESNV 433
N ++A +L+ ++S + ++ C G +++ L A + + P +V
Sbjct: 183 NGRLKEARRLF---------ESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVR-DV 232
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+++ Y++ G ++ A+ F+ +V WTA+++GY +G+ EA F+ M
Sbjct: 233 ISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEM--- 289
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
V N ++ +L+ V+ + ++F +M + + ++ G++G + +A
Sbjct: 290 -PVKNEISYNAMLAGYVQYKKMVIAGELFEAMP----CRNISSWNTMITGYGQNGGIAQA 344
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
+ MP + D V W A++S
Sbjct: 345 RKLFDMMP-QRDCVSWAAIISG 365
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 225/672 (33%), Positives = 348/672 (51%), Gaps = 59/672 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
IV+ I G L +R +F P+ R V +N M+ YS ++ L M
Sbjct: 79 IVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDM 138
Query: 76 HRSNVKLNETTFSTILSVCAQL-NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
R N + + TF+++L A + +Q+HC V+KSG V + L+ Y C
Sbjct: 139 QRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAA 198
Query: 135 ---------IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
+ EA+++FDE+ +EL W+ ++ GYV+ N + A + KK V W
Sbjct: 199 SPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWN 258
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
+ISGYA E A ++FR M S + +E+TF SVI CA G F GK +H +
Sbjct: 259 AMISGYAHRGLYLE-AFEMFRKMIMSKIQL-DEFTFTSVISVCANAGCFRLGKEMHAYFL 316
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
K A D AM V +N+LI G+++ A+
Sbjct: 317 KT----------------VANPAPDVAMPV-----------NNALITFYWKCGKVDIAQE 349
Query: 306 IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
IFN++ E + +S+N ++ GY +D++K F +MP E+N ++
Sbjct: 350 IFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMP-----------------EKNILS 392
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
W MISG Q E+AL+ + M+ + F+ +CS LGSL+ G+ LHA +V
Sbjct: 393 WIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVV 452
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ +ES++ G +L+ MY+RCG ++ A F ++ + +W A++ HG G++A+
Sbjct: 453 RYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIE 512
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLL 544
LFE ML++ I+P+ +F+ V+SAC AGLV EG K F SM + YGV P EHY ++DLL
Sbjct: 513 LFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLL 572
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
R+G EA+E ++ MP E A +W ALL+ C N+++G AA+++F L + YV
Sbjct: 573 CRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYV 632
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+LSN+YAV G+W +RK + VKK+PGCSWIE+ ++VH+F V D N+P IY
Sbjct: 633 LLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYN 692
Query: 665 TLEHLTANLNSV 676
LE L + +
Sbjct: 693 YLEQLVLEMRKI 704
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 158/380 (41%), Gaps = 66/380 (17%)
Query: 296 SMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
S+ R A +I + I N +I Y+ +++ ++ LF+++P I++ T+I+
Sbjct: 30 SLARPVHAHMIASGFQPRGHI-LNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAA 88
Query: 356 ----------------IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
P R+ V +N+MI+ Y N+ A++L+ M++
Sbjct: 89 YSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNY 148
Query: 400 TFSVLFHACSCLGSLQQG-QLLHAHLVK--TPFESNV-------YVG------------- 436
TF+ + A + + ++ Q LH +VK T F ++V YV
Sbjct: 149 TFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLM 208
Query: 437 ------------------TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
T+++ Y + ++ A+ + S AW A+++GY+H G
Sbjct: 209 AEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRG 268
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI----FRSMKSYGVVPTL 534
L EA +F M+ I + TF V+S C AG G ++ +++ + +
Sbjct: 269 LYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAM 328
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
++ + G + A+E MP E D V W +LS ++N+ + A
Sbjct: 329 PVNNALITFYWKCGKVDIAQEIFNKMP-ERDLVSWNIILSG---YVNVRCMDEAKSFFNE 384
Query: 595 LDKKPISAYVILSNIYAVLG 614
+ +K I +++I+ + A +G
Sbjct: 385 MPEKNILSWIIMISGLAQIG 404
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + + N IT R G + A LF MP +SWN M+ + + +++ L
Sbjct: 457 ESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEE 516
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQ 105
M + + + +F T++S C+ + +G++
Sbjct: 517 MLKEGILPDRISFLTVISACSHAGLVKEGRK 547
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 224/666 (33%), Positives = 353/666 (53%), Gaps = 55/666 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+NG + AR +FDQ+ +T V+W T++ GY+K + SL L + M +NV + S+
Sbjct: 84 KNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSS 143
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C+ L L GKQIH VL+ G E V + L+ FY C ++ +++FD+
Sbjct: 144 VLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQ----- 198
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
M K+++ WT +ISGY ++ E A+KLF M
Sbjct: 199 --------------------------MVVKNIISWTTMISGYMQNSFDWE-AMKLFGEMN 231
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G P+ + SV+ +C L A +G+ VH IK E +E + LI+ Y
Sbjct: 232 RLGWK-PDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLL 290
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN----RLTEANSISYNSMIKGY 325
A +V+D + + + N++I G S ++ +A +F+ RL + +++ S++
Sbjct: 291 XDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVS 350
Query: 326 AVYGQVDDSKRL----------FEKMPHRSIISLNTMIS-------VIPEM-ERNPVTWN 367
A ++ SK++ + ++I + + S V EM E++ V WN
Sbjct: 351 ASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWN 410
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+M GY Q+ +E+AL+LY T++ TF+ L A S L SL+ GQ H LVK
Sbjct: 411 AMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM 470
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ +V +LVDMY++CGSI +A+ F+S +V W ++++ ++ HG EA+ +F
Sbjct: 471 GLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMF 530
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
M+++ I PN TFV VLSAC AG V +G+ F SM +G+ P EHY CVV LLGRS
Sbjct: 531 REMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRS 590
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L EA+EFI+ MPIE A+VW +LLSAC N+E+G+ AA+ D K +Y++LS
Sbjct: 591 GKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLS 650
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NI+A G W +R R+ EV K+PG SWIE+N++V+ F + ++I + L+
Sbjct: 651 NIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLD 710
Query: 668 HLTANL 673
L ++
Sbjct: 711 ILIQHI 716
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/556 (23%), Positives = 239/556 (42%), Gaps = 94/556 (16%)
Query: 58 GYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYEC 117
GYS+ A + V +S NE ++++ C QL + G Q+H V++SG++
Sbjct: 15 GYSEEAL----MVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQ 70
Query: 118 FEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
+VG+ L+ FY+ +IE A+ VFD+L E + W+ ++ GY +C + ++F +M
Sbjct: 71 DVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMR 130
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+ +VV P+ Y SV+ AC+ L G
Sbjct: 131 ETNVV---------------------------------PDRYVVSSVLSACSMLEFLEGG 157
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
K +H +++ G E D S+ LI+FY C +++D++ + + ++I+G +
Sbjct: 158 KQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQN 217
Query: 298 GRIEDAELIF---NRL------------------------------------TEANSISY 318
+A +F NRL E+N
Sbjct: 218 SFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVK 277
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N +I YA + D+K++F+ M E+N +++N+MI GY
Sbjct: 278 NGLIDMYAKSNLLXDAKKVFDVMA-----------------EQNVISYNAMIEGYSSQEK 320
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+AL+L+ MR + TF L + L +L+ + +H ++K +++ G++
Sbjct: 321 LSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSA 380
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+D+YS+C + DA+ F ++ ++ W A+ GY+ H EA+ L+ + PN
Sbjct: 381 LIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPN 440
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
TF +++A + G + + G+ +VD+ + G + EA +
Sbjct: 441 EFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMF- 499
Query: 559 DMPIELDAVVWGALLS 574
+ I D V W +++S
Sbjct: 500 NSSIWRDVVCWNSMIS 515
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 185/430 (43%), Gaps = 84/430 (19%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I ++ L A+ +FD M + V+S+N M+ GYS K E+L L M
Sbjct: 278 NGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFP 337
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ TF ++L V A L +L KQIH L++K G F GS L+ Y+ C +++A+ V
Sbjct: 338 PSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHV 397
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F+E++E + ++W+ M GY Q +L + E+A
Sbjct: 398 FEEMNEKDIVVWNAMFFGYTQ-HLEN-------------------------------EEA 425
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
LKL+ ++ S + PNE+TF ++I A + L + G+ H L+K G +F + AL++
Sbjct: 426 LKLYSTLQFSRQK-PNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVD 484
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
Y C G IE+A +FN + + +NSM
Sbjct: 485 MYAKC-------------------------------GSIEEARKMFNSSIWRDVVCWNSM 513
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK 381
I +A +G+ +++ +F +M I + N VT+ +++S E
Sbjct: 514 ISTHAQHGEAEEALGMFREMMKEGI-------------QPNYVTFVAVLSACSHAGXVED 560
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH--LVKTPFESNVYVGTSL 439
L + +M I ++ + S LG + G+L A + K P E V SL
Sbjct: 561 GLNHFNSMPGFGIKPGTEHYACV---VSLLG--RSGKLFEAKEFIEKMPIEPAAIVWRSL 615
Query: 440 VDMYSRCGSI 449
+ G++
Sbjct: 616 LSACRIAGNV 625
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 2/197 (1%)
Query: 380 EKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
E+AL +++ + RK + + AC+ LG +++G LH +V++ F+ +VYVGTS
Sbjct: 18 EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 77
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+D YS+ G I A+ F + WT ++ GY+ G ++ LF M E ++VP+
Sbjct: 78 LIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPD 137
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
VLSAC + G +I + G + ++D + + +
Sbjct: 138 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 197
Query: 559 DMPIELDAVVWGALLSA 575
M ++ + + W ++S
Sbjct: 198 QMVVK-NIISWTTMISG 213
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
TN + + G + AR +F+ R VV WN+M+ +++ + +E+L + M + +
Sbjct: 479 TNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGI 538
Query: 81 KLNETTFSTILSVCAQLNSLIDG 103
+ N TF +LS C+ + DG
Sbjct: 539 QPNYVTFVAVLSACSHAGXVEDG 561
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 227/748 (30%), Positives = 355/748 (47%), Gaps = 93/748 (12%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N +T G TA +LF MP VVSWNT++ GY + F S+ L M R
Sbjct: 86 VSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRR 145
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
V L+ TT + +L C L+ L G QIH L +K+G E GS L+ Y C +++A
Sbjct: 146 GVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDA 205
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK-------------------- 178
R F + E N + W + G VQ + ++F++M +
Sbjct: 206 LRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAM 265
Query: 179 -------------------KDVVVWTKLISGYAKS-----------------VDGCE--- 199
D VV T ++ YAK+ V+ C
Sbjct: 266 PCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMM 325
Query: 200 ----------KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
+A++LF++M SG + + V ACA + + +G VH L +K GF
Sbjct: 326 VGLVRTGLGAEAMQLFQFMTRSGVGF-DVISLSGVFSACAEVKGYFQGLQVHCLAVKSGF 384
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
+ D + A+++ Y C+A A V+ +E + N++I L ED N
Sbjct: 385 DVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNE 444
Query: 310 L----TEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
+ E + +Y S++K G V+G+ S + +++ +
Sbjct: 445 MLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGA 504
Query: 356 IPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
I E ++ V+WNS+ISG+ E+A + + M + + T++ +
Sbjct: 505 ITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDT 564
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ L +++ G+ +H ++K + Y+ ++LVDMY++CG++ D+ F + +W
Sbjct: 565 CANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSW 624
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
A++ GY+ HG G EA+ +FE M ++VPN ATFV VL AC GL+++G + F M S
Sbjct: 625 NAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTS 684
Query: 528 -YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
Y +VP LEH+ C+VD+LGRS EA EFI+ MPIE DAVVW LLS C ++EV E
Sbjct: 685 RYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAE 744
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
AA + LD S Y++LSN+YA GKW R+ + ++K+PGCSWIE+ S +
Sbjct: 745 TAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEM 804
Query: 647 HAFSVEDRNNPNCNVIYATLEHLTANLN 674
H F V D+ +P +Y L L +
Sbjct: 805 HGFLVGDKVHPRSKEVYEMLNSLIGEMK 832
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/562 (24%), Positives = 230/562 (40%), Gaps = 73/562 (12%)
Query: 85 TTFSTILSVCAQL--NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
TFS + +CA ++L G+ H +L SG+ FV + LL YA C A VF
Sbjct: 18 ATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVF 77
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
D + + + W+ ML YV A +F MP DVV W LISGY + ++
Sbjct: 78 DTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQH-GMFRNSV 136
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
L M G + + T ++++C L G +H L +K G E D G AL++
Sbjct: 137 GLSMEMSRRGVAL-DRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDM 195
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLI--------------------------- 295
Y C + D A+R + + + + I G +
Sbjct: 196 YGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAY 255
Query: 296 -------------SMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
S R A I N + ++ + +++ YA G + D++R F +P
Sbjct: 256 ASAFRSCAAMPCLSTARQLHAHAIKNVFS-SDRVVGTAIVDVYAKAGNLVDARRAFIGLP 314
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
H N T N+M+ G V+ L +A+QL+ M + + + S
Sbjct: 315 H-----------------HNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLS 357
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+F AC+ + QG +H VK+ F+ +V V +++D+Y +C ++ +A F +
Sbjct: 358 GVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQR 417
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC-----VRAGLVNE 517
+ +W A++ + + + ML + P+ T+ VL AC + GLV
Sbjct: 418 DSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVH 477
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
G I + V + VVD+ + G + EA++ + D + V W +++S
Sbjct: 478 GKAIKSGLGLDAFVS-----STVVDMYCKCGAITEAQK-LHDRIGGQELVSWNSIISGFS 531
Query: 578 FWMNMEVGERAAQKMFGLDKKP 599
E +R +M + KP
Sbjct: 532 LTKQSEEAQRFFSEMLDMGVKP 553
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 144/361 (39%), Gaps = 66/361 (18%)
Query: 211 SGENMPNEYTFDSVIRACARLG--AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+G TF + + CA G A G+ H ++ GF + L++ Y C
Sbjct: 10 AGAGFVATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARC-- 67
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
G A +F+ + +++S+N+M+ Y
Sbjct: 68 -----------------------------GGTAHAHGVFDTMPHRDTVSWNTMLTAYVHA 98
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G D + LF MP ++S WN++ISGY Q+ + ++ L M
Sbjct: 99 GDTDTAASLFGTMPDPDVVS-----------------WNTLISGYCQHGMFRNSVGLSME 141
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M + + R+T +VL +C L L G +HA VKT E++V G++LVDMY +C S
Sbjct: 142 MSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRS 201
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
++DA F + N +W A + G + + + LF M + + + +
Sbjct: 202 LDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRS 261
Query: 509 CVRAGLVNEGMK--------IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
C ++ + +F S + G T +VD+ ++G+L +A +
Sbjct: 262 CAAMPCLSTARQLHAHAIKNVFSSDRVVG--------TAIVDVYAKAGNLVDARRAFIGL 313
Query: 561 P 561
P
Sbjct: 314 P 314
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 210/668 (31%), Positives = 345/668 (51%), Gaps = 56/668 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ A +F MP + V+WN +L GY++ L L +M +VK NE T +T+L
Sbjct: 262 GEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVL 321
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
CA +L G+ IH L++K GYE EF+G GL+ Y+
Sbjct: 322 KGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYS--------------------- 360
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+C L DA VF + K D+VVW+ LI+ + E+++KLF MR
Sbjct: 361 ----------KCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQS-EESIKLFHLMR-L 408
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G+ +PN+YT S++ A G G+ +H + K GFE D ++ AL+ Y
Sbjct: 409 GDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHD 468
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----------------- 314
++Y+ + + L + N+ ++GL G + IF + E
Sbjct: 469 GTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSC 528
Query: 315 --SISYNSMIKGYAVYGQVDDSKRL---FEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ Y + + + Q+DD+ + M + + + ++ R+ TW +
Sbjct: 529 LFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVI 588
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
I+ Y Q N EKAL + M++ + T + CS L SL+ GQ LH+ + K+
Sbjct: 589 ITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGH 648
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
S+++VG++LVDMY++CG + +A+A F ++ + AW ++ GY+ +G G++A+ F +
Sbjct: 649 VSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRM 708
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSG 548
ML++ I P+ TF G+LSAC GLV EG + F SM + +G+ PT++H C+VD+LGR G
Sbjct: 709 MLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVG 768
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
E E+FI+ M + +A++W +L A N+ +GE+AA K+F L + S+Y++LSN
Sbjct: 769 KFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSN 828
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
I+A G+W +R ++ VKK+PGCSW+E N +VH F D ++P I+ L+
Sbjct: 829 IFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDE 888
Query: 669 LTANLNSV 676
L L S+
Sbjct: 889 LDRELASI 896
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 148/576 (25%), Positives = 257/576 (44%), Gaps = 90/576 (15%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR + +MP R VVSW ++ G ++S+ L M + NE T +T L C+
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSL 225
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+L GKQ+H K G FVGS L+ YA C EIE A ++F + E N++ W+++
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
L GY Q ++ +F M + DV
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVKC--------------------------------- 312
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
NE+T +V++ CA +G+V+H L+IKCG+E +E IG L++ Y C A+ V+
Sbjct: 313 NEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVF 372
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRL-------------------TEANSIS 317
++ P + ++LI L G+ E++ +F+ + T ++
Sbjct: 373 KTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432
Query: 318 Y--------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
Y N+++ Y G V D +L+E M R +IS
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLIS--------- 483
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
WN+ +SG ++++ L ++ M + TF + +CSCL + G
Sbjct: 484 --------WNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYG 535
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+ +HAH++K + N +V T+L+DMY++C + DA +F+ +S ++ WT ++ Y+
Sbjct: 536 RQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQT 595
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
G +A+ F M ++ + PN T G LS C + G ++ + G V +
Sbjct: 596 NQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVG 655
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ +VD+ + G + EAE + + I D + W ++
Sbjct: 656 SALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 201/490 (41%), Gaps = 115/490 (23%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+S++L CA SL K IH L++K D ++
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVK------------------------------DVIN 144
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLF 205
D+ L SL+ V Y +C + A V KMP +DVV WT LI G +G ++ LF
Sbjct: 145 PDSHLWVSLVNV-YAKCRYSAYARLVLAKMPDRDVVSWTALIQGLV--AEGFANDSIYLF 201
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
+ M+ G MPNE+T + ++AC+ A GK +H K G D +G AL++ Y
Sbjct: 202 QEMQNEGI-MPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAK 260
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
C G IE A +F + E N +++N ++ GY
Sbjct: 261 C-------------------------------GEIELASKMFIGMPEQNDVTWNVLLNGY 289
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
A G V +LF
Sbjct: 290 AQRGDVTGVLKLF----------------------------------------------- 302
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+M +L + T + + C+ +L+QGQ++H+ ++K +E N ++G LVDMYS+
Sbjct: 303 -CSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSK 361
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CG DA F +I P++ W+AL+ G E++ LF +M D +PN T +
Sbjct: 362 CGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSL 421
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
LSA G + G I + YG + +V + ++G +H+ + + M ++ D
Sbjct: 422 LSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRD 480
Query: 566 AVVWGALLSA 575
+ W A LS
Sbjct: 481 LISWNAYLSG 490
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 138/332 (41%), Gaps = 64/332 (19%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
ET + +N +T +NG + L++ M R ++SWN L G +D L++
Sbjct: 447 ETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYH 506
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M N TF +IL C+ L + G+Q+H ++K+ + FV + L+ YA C
Sbjct: 507 MLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMY 566
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+E+A F+ L + W++++ Y Q N
Sbjct: 567 LEDADVAFNRLSVRDLFTWTVIITNYAQTN------------------------------ 596
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
EKAL FR M++ G PNE+T + C+ L + G+ +H ++ K G D
Sbjct: 597 --QGEKALNYFRQMQQEGVK-PNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMF 653
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+G AL++ Y C G +E+AE +F L +
Sbjct: 654 VGSALVDMYAKC-------------------------------GCMEEAEALFEALIRRD 682
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
+I++N++I GYA GQ + + F M I
Sbjct: 683 TIAWNTIICGYAQNGQGNKALTAFRMMLDEGI 714
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 208/639 (32%), Positives = 334/639 (52%), Gaps = 86/639 (13%)
Query: 39 NLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR--SNVKLNETTFSTILSVCAQ 96
+LF M R VS+N ++ G+S ++ L T+ R S+V+ + T S ++ +
Sbjct: 93 SLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASA 152
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L G+Q HC +L+ G+ FVGS L+ YA I +AKRVFDE+ N ++++ M
Sbjct: 153 LGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTM 212
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENM 215
+ G ++C ++ +A +F M +D + WT +++G+ + +G E +AL FR MR G +
Sbjct: 213 ITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQ--NGLESQALNFFRRMRFQGIAI 270
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
++YTF S++ AC L A +GK +H +I+ ++ + +G AL++ Y C +
Sbjct: 271 -DQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRS------- 322
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
I+ AE F R++ N IS+ ++I GY G +++
Sbjct: 323 ------------------------IKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAV 358
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
R+F EM+R+ ID
Sbjct: 359 RVFS------------------EMQRD------------------------------GID 370
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
T + +C+ L SL++G H + + + V +LV +Y +CGSI DA
Sbjct: 371 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRL 430
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F + + +WTAL+ GY+ G E + LFE ML +D+ P+ TF+GVLSAC RAG V
Sbjct: 431 FDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFV 490
Query: 516 NEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+G F SM K +G+VP +HYTC++DL RSG L EAEEFIK MP+ DA+ WG LLS
Sbjct: 491 EKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLS 550
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
AC +ME+G+ AA+ + +D + ++YV+L +++A G W + +R+ + +VKK+
Sbjct: 551 ACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKE 610
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
PGCSWI+ ++VH FS +D+++P IY LE L + +
Sbjct: 611 PGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKM 649
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 179/418 (42%), Gaps = 95/418 (22%)
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A RV+D +P L N+L++ L ++D + +F + + +++SYN++I G++ G
Sbjct: 60 ARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAH 119
Query: 332 DDSKRLFEKM--------PHRSIISLNTMIS----------------------------- 354
+ RL+ + P R +S M +
Sbjct: 120 ARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGS 179
Query: 355 -----------------VIPEME-RNPVTWNSMISG------------------------ 372
V EM+ +N V +N+MI+G
Sbjct: 180 PLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCIT 239
Query: 373 -------YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
+ QN L +AL + MR I + TF + AC L +L+QG+ +HA+++
Sbjct: 240 WTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYII 299
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+T ++ NV+VG++LVDMYS+C SI A+ +F +S N+ +WTAL+ GY +G EAV
Sbjct: 300 RTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVR 359
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----V 541
+F M I P+ T V+S+C + EG + +V L HY V V
Sbjct: 360 VFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQF----HCLALVSGLMHYITVSNALV 415
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
L G+ G + +A +M D V W AL++ + + +KM D KP
Sbjct: 416 TLYGKCGSIEDAHRLFDEMLFH-DQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKP 472
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/515 (23%), Positives = 215/515 (41%), Gaps = 115/515 (22%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N IT R + AR LF+ M R ++W TM+ G+++ ++L+ M
Sbjct: 206 VVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRF 265
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ +++ TF +IL+ C L++L GKQIH ++++ Y+ FVGS L+ Y+ C I+
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKP 325
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ F + N + W+ ++VGY Q +G
Sbjct: 326 AETAFRRMSCKNIISWTALIVGYGQ---------------------------------NG 352
Query: 198 C-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
C E+A+++F M+ G + P+++T SVI +CA L + EG H L + G ++
Sbjct: 353 CSEEAVRVFSEMQRDGID-PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVS 411
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
AL+ Y C G IEDA +F+ + + +
Sbjct: 412 NALVTLYGKC-------------------------------GSIEDAHRLFDEMLFHDQV 440
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S+ +++ GYA +G+ ++ LFEKM + +++ + VT+ ++S +
Sbjct: 441 SWTALVTGYAQFGRAKETIDLFEKM-------------LAKDVKPDGVTFIGVLSACSRA 487
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
EK CS S+Q+ + P + +
Sbjct: 488 GFVEK-------------------------GCSYFHSMQKDHGI------VPIDDHY--- 513
Query: 437 TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
T ++D+YSR G + +A+ + P+ W L++ G E +LE D
Sbjct: 514 TCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEID- 572
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
N A++V + S G N+ ++ R M+ V
Sbjct: 573 PQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQV 607
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
P + N L+ GR A +F+ N +YN+++ A +DD LF M
Sbjct: 39 PPTHLLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASM 98
Query: 342 PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL--AIDRTRS 399
+R+ V++N++I+G+ H +A++LY T+ + ++ +R
Sbjct: 99 A-----------------QRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRI 141
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T S + A S LG G+ H +++ F N +VG+ LV MY++ G I DA+ F +
Sbjct: 142 TMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEM 201
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
NV + ++ G + EA LFE+M ++D + T+ +++ + GL ++ +
Sbjct: 202 DGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCI----TWTTMVTGFTQNGLESQAL 257
Query: 520 KIFRSMKSYGVVPTLEHYT 538
FR M+ G+ ++ YT
Sbjct: 258 NFFRRMRFQGIA--IDQYT 274
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 224/708 (31%), Positives = 377/708 (53%), Gaps = 64/708 (9%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
MT + L V+ N I+ +N ++ AR LFDQM +R +VSWNTM+ GY +E+ L
Sbjct: 43 MTHKNL-VTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASEL 101
Query: 72 VSTM-HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL-KSGYECFEFVGSGLLFFY 129
M R N +++ +++ + L +++ LV K C+ + +G Y
Sbjct: 102 FDVMPERDNF-----SWALMITCYTRKGKLEKARELLELVPDKLDTACWNAMIAG----Y 152
Query: 130 ANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
A + +AK+VF+++ + + ++ ML GY Q M A F M +++VV W +++
Sbjct: 153 AKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVA 212
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC--ARLGAFCEGK--------- 238
GY KS D A +LF E +PN V C A+ G E +
Sbjct: 213 GYVKSGD-LSSAWQLF-------EKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSK 264
Query: 239 --VVHGLLIKC---GFEFDESIG-------------GALIEFYCGCEAFDGAMRVYDRLE 280
V +I + DE++ +I Y D A +VY+++
Sbjct: 265 NVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMP 324
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
+ A +L++GLI GRI++A+ +F+R+ + + +NSMI GY+ G++D++ LF +
Sbjct: 325 CKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQ 384
Query: 341 MPHRSIISLNTMISVIPEM--------------ERNPVTWNSMISGYVQNNLHEKALQLY 386
MP ++ +S NTMIS + E+N V+WNS+I+G++QNNL+ AL+
Sbjct: 385 MPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSL 444
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
+ M K +STF+ AC+ L +LQ G LH +++K+ + ++++VG +L+ MY++C
Sbjct: 445 VMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKC 504
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G + A+ F I ++ +W +L++GY+ +G ++A FE M + +VP+ TF+G+L
Sbjct: 505 GRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGML 564
Query: 507 SACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
SAC AGL N+G+ IF+ M + + + P EHY+C+VDLLGR G L EA ++ M ++ +
Sbjct: 565 SACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKAN 624
Query: 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKR 625
A +WG+LL AC N+E+G AA+++F L+ S Y+ LSN++A G+W + +R
Sbjct: 625 AGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRML 684
Query: 626 LTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ K PGCSWIE+ +++ F D I L L A++
Sbjct: 685 MRGKRAGKQPGCSWIEVQNQIQHFLSHDPAKLRPKNIQIILNTLAAHM 732
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/510 (22%), Positives = 227/510 (44%), Gaps = 78/510 (15%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++EEA R+F + N + ++ M+ + + DA +F +M +++V W +I+GY
Sbjct: 32 KVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLH 91
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ + E+A +LF M E + +++ +I R G + + + L+ + D
Sbjct: 92 N-NMVEEASELFDVMPER-----DNFSWALMITCYTRKGKLEKARELLELVPD---KLDT 142
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
+ A+I Y F+ A +V++++ L + NS++ G G++ A F +TE
Sbjct: 143 ACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTER 202
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-------------- 359
N +S+N M+ GY G + + +LFEK+P+ + +S TM+ + +
Sbjct: 203 NVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMP 262
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTM----------------RKLAIDRTRSTFSV 403
+N V+WN+MI+ YVQ+ ++A++L+ M R +D R ++
Sbjct: 263 SKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQ 322
Query: 404 L----FHACSCL--GSLQQGQLLHA-HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ A + L G +Q G++ A + +V S++ YSR G +++A F
Sbjct: 323 MPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLF 382
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV-------------------- 496
+ N +W +++GY+ G A +F+ M E++IV
Sbjct: 383 RQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALK 442
Query: 497 -----------PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
P+ +TF LSAC + G ++ + G + L ++ +
Sbjct: 443 SLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYA 502
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G + AE+ +D+ +D + W +L+S
Sbjct: 503 KCGRVQSAEQVFRDIEC-VDLISWNSLISG 531
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 170/329 (51%), Gaps = 38/329 (11%)
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N I L +G++E+A IF +T N ++YNSMI A ++ D+++LF++M
Sbjct: 21 NRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQM------ 74
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
SL RN V+WN+MI+GY+ NN+ E+A +L+ M +R +++++
Sbjct: 75 SL-----------RNLVSWNTMIAGYLHNNMVEEASELFDVMP----ERDNFSWALMITC 119
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
+ G L++ + L L P + + +++ Y++ G NDA+ F + + ++ ++
Sbjct: 120 YTRKGKLEKAREL---LELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSY 176
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
+++ GY+ +G A+ FE M E+++V ++ +++ V++G ++ ++F + +
Sbjct: 177 NSMLAGYTQNGKMHLALQFFESMTERNVV----SWNLMVAGYVKSGDLSSAWQLFEKIPN 232
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
P + ++ L + G + EA E MP + + V W A+++ + +++V E
Sbjct: 233 ----PNAVSWVTMLCGLAKYGKMAEARELFDRMPSK-NVVSWNAMIAT--YVQDLQVDE- 284
Query: 588 AAQKMF-GLDKKPISAYVILSNIYAVLGK 615
A K+F + K ++ + N Y +GK
Sbjct: 285 -AVKLFKKMPHKDSVSWTTIINGYIRVGK 312
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 210/668 (31%), Positives = 345/668 (51%), Gaps = 56/668 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ A +F MP + V+WN +L GY++ L L +M +VK NE T +T+L
Sbjct: 262 GEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVL 321
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
CA +L G+ IH L++K GYE EF+G GL+ Y+
Sbjct: 322 KGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYS--------------------- 360
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+C L DA VF + K D+VVW+ LI+ + E+++KLF MR
Sbjct: 361 ----------KCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQS-EESIKLFHLMR-L 408
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G+ +PN+YT S++ A G G+ +H + K GFE D ++ AL+ Y
Sbjct: 409 GDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHD 468
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----------------- 314
++Y+ + + L + N+ ++GL G + IF + E
Sbjct: 469 GTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSC 528
Query: 315 --SISYNSMIKGYAVYGQVDDSKRL---FEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ Y + + + Q+DD+ + M + + + ++ R+ TW +
Sbjct: 529 LFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVI 588
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
I+ Y Q N EKAL + M++ + T + CS L SL+ GQ LH+ + K+
Sbjct: 589 ITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGH 648
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
S+++VG++LVDMY++CG + +A+A F ++ + AW ++ GY+ +G G++A+ F +
Sbjct: 649 VSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRM 708
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSG 548
ML++ I P+ TF G+LSAC GLV EG + F SM + +G+ PT++H C+VD+LGR G
Sbjct: 709 MLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVG 768
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
E E+FI+ M + +A++W +L A N+ +GE+AA K+F L + S+Y++LSN
Sbjct: 769 KFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSN 828
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
I+A G+W +R ++ VKK+PGCSW+E N +VH F D ++P I+ L+
Sbjct: 829 IFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDE 888
Query: 669 LTANLNSV 676
L L S+
Sbjct: 889 LDRELASI 896
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 148/576 (25%), Positives = 257/576 (44%), Gaps = 90/576 (15%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR + +MP R VVSW ++ G ++S+ L M + NE T +T L C+
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSL 225
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+L GKQ+H K G FVGS L+ YA C EIE A ++F + E N++ W+++
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
L GY Q ++ +F M + DV
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVKC--------------------------------- 312
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
NE+T +V++ CA +G+V+H L+IKCG+E +E IG L++ Y C A+ V+
Sbjct: 313 NEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVF 372
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRL-------------------TEANSIS 317
++ P + ++LI L G+ E++ +F+ + T ++
Sbjct: 373 KTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432
Query: 318 Y--------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
Y N+++ Y G V D +L+E M R +IS
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLIS--------- 483
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
WN+ +SG ++++ L ++ M + TF + +CSCL + G
Sbjct: 484 --------WNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYG 535
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+ +HAH++K + N +V T+L+DMY++C + DA +F+ +S ++ WT ++ Y+
Sbjct: 536 RQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQT 595
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
G +A+ F M ++ + PN T G LS C + G ++ + G V +
Sbjct: 596 NQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVG 655
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ +VD+ + G + EAE + + I D + W ++
Sbjct: 656 SALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 201/490 (41%), Gaps = 115/490 (23%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+S++L CA SL K IH L++K D ++
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVK------------------------------DVIN 144
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLF 205
D+ L SL+ V Y +C + A V KMP +DVV WT LI G +G ++ LF
Sbjct: 145 PDSHLWVSLVNV-YAKCRYSAYARLVLAKMPDRDVVSWTALIQGLV--AEGFANDSIYLF 201
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
+ M+ G MPNE+T + ++AC+ A GK +H K G D +G AL++ Y
Sbjct: 202 QEMQNEGI-MPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAK 260
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
C G IE A +F + E N +++N ++ GY
Sbjct: 261 C-------------------------------GEIELASKMFIGMPEQNDVTWNVLLNGY 289
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
A G V +LF
Sbjct: 290 AQRGDVTGVLKLF----------------------------------------------- 302
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+M +L + T + + C+ +L+QGQ++H+ ++K +E N ++G LVDMYS+
Sbjct: 303 -CSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSK 361
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CG DA F +I P++ W+AL+ G E++ LF +M D +PN T +
Sbjct: 362 CGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSL 421
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
LSA G + G I + YG + +V + ++G +H+ + + M ++ D
Sbjct: 422 LSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRD 480
Query: 566 AVVWGALLSA 575
+ W A LS
Sbjct: 481 LISWNAYLSG 490
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 138/332 (41%), Gaps = 64/332 (19%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
ET + +N +T +NG + L++ M R ++SWN L G +D L++
Sbjct: 447 ETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYH 506
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M N TF +IL C+ L + G+Q+H ++K+ + FV + L+ YA C
Sbjct: 507 MLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMY 566
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+E+A F+ L + W++++ Y Q N
Sbjct: 567 LEDADVAFNRLSVRDLFTWTVIITNYAQTN------------------------------ 596
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
EKAL FR M++ G PNE+T + C+ L + G+ +H ++ K G D
Sbjct: 597 --QGEKALNYFRQMQQEGVK-PNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMF 653
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+G AL++ Y C G +E+AE +F L +
Sbjct: 654 VGSALVDMYAKC-------------------------------GCMEEAEALFEALIRRD 682
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
+I++N++I GYA GQ + + F M I
Sbjct: 683 TIAWNTIICGYAQNGQGNKALTAFRMMLDEGI 714
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 218/679 (32%), Positives = 348/679 (51%), Gaps = 80/679 (11%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
++ V KAI+ RNG A +FD MP+R VS+N M+ GY + AKF + L
Sbjct: 29 EDPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFD 88
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M ++ F + +L YA
Sbjct: 89 KMPHKDL---------------------------------------FSWNLMLTGYARNR 109
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+ +A+ +FD + E + + W+ ML GYV+ + +A DVF +MP K+ + W L++ Y +
Sbjct: 110 RLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVR 169
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
S E+A +LF E D + +C G V +L FD+
Sbjct: 170 S-GRLEEARRLF------------ESKSDWELISC---NCLMGGYVKRNMLGDARQLFDQ 213
Query: 254 SIGGALIEFYCGCEAF--DGAMRVYDRL--ENPCLNASN--SLINGLISMGRIEDAELIF 307
LI + + DG + RL E+P + +++ + G +++A +F
Sbjct: 214 IPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVF 273
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS------------- 354
+ + + +SYN MI GYA Y ++D + LFE+MP +I S N MIS
Sbjct: 274 DEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARN 333
Query: 355 ---VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
++P+ R+ V+W ++I+GY QN L+E+A+ + + M++ RSTF AC+ +
Sbjct: 334 LFDMMPQ--RDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADI 391
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
+L+ G+ +H +V+T +E VG +LV MY +CG I++A F + ++ +W ++
Sbjct: 392 AALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTML 451
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGV 530
GY+ HG G +A+ +FE M+ + P+ T VGVLSAC GL + G + F SM K YG+
Sbjct: 452 AGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGI 511
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
P +HY C++DLLGR+G L EA+ I++MP E DA WGALL A NME+GE+AA+
Sbjct: 512 TPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAE 571
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
+F ++ YV+LSN+YA G+W +R ++ + V+K PG SW+E+ +++H F+
Sbjct: 572 MVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFT 631
Query: 651 VEDRNNPNCNVIYATLEHL 669
V D +P IYA LE L
Sbjct: 632 VGDCFHPEKGRIYAFLEEL 650
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 208/669 (31%), Positives = 350/669 (52%), Gaps = 54/669 (8%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMP-----IRTVVSWNTMLCGYSKWAKFDESLSLVS 73
V+ N IT C NG + A ++M + VVSW+ ++ G+++ +E++ ++
Sbjct: 227 VTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLF 286
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M + N T + +L CA+L L GKQ+H + + + V + L+ Y C
Sbjct: 287 RMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCG 346
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLIS 189
++ A ++F + N L + M+VGY + +S A ++F M ++ ++ W +IS
Sbjct: 347 DMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIIS 406
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
GY ++ ++A +F+ M P+ +T SV+ ACA + +GK +H I G
Sbjct: 407 GYVRNF-MFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGL 465
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
+ D +GGAL+E Y C+ A ++ F+
Sbjct: 466 QSDTFVGGALVEMYSKCQDLTAA-------------------------------QVAFDE 494
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ E + ++N++I GY Q++ + L EKM N TWNS+
Sbjct: 495 VMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDG-------------YHPNIYTWNSI 541
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
++G V+N + +QL+ M+ + T ++ ACS L +L++G+ HAH +K +
Sbjct: 542 LAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGY 601
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+++V++G +LVDMY++CGS+ AQ ++ IS+PN+ + A++ + HG G E + LF+
Sbjct: 602 DTDVHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQT 661
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
ML +P+ TF+ VLS+CV G V G + F M Y V PTL+HYT +VDLL RSG
Sbjct: 662 MLALGFIPDHVTFLSVLSSCVHVGSVETGCEFFDLMGYYNVKPTLKHYTSMVDLLSRSGQ 721
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
LHEA E IK MP+E D+V+WGALL C N+E+GE AA+++ L+ YV+L+N+
Sbjct: 722 LHEAYELIKKMPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANL 781
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+A +W +R + + K PGCSWIE + +H+F DR++ IYATL++L
Sbjct: 782 HAYARRWTDLARVRGMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHKRAEEIYATLDYL 841
Query: 670 TANLNSVVL 678
++ + ++
Sbjct: 842 ALHMKTGIV 850
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 237/512 (46%), Gaps = 52/512 (10%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
R G L A LF+ MP+R + SW +L Y F+E+ L + V+L+ F
Sbjct: 105 ARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFP 164
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+ C+ L S+ G+Q+H LV+K + +V + L+ Y C +++AK+V ++ E
Sbjct: 165 LVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPER 224
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD-----VVVWTKLISGYAKSVDGCEKALK 203
+ + W+ ++ ++ +A + KM D VV W+ +I G+A++ E
Sbjct: 225 DSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEM 284
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
LFR E +PN T V+ ACARL GK +HG + + F + + AL++ Y
Sbjct: 285 LFRMQVEG--LVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVY 342
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIK 323
C GA + IF + + N +S N+MI
Sbjct: 343 RRCGDMGGAAK-------------------------------IFLKFSVKNVLSCNTMIV 371
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
GY G V +K LF+ M + +ER ++WNS+ISGYV+N + ++A
Sbjct: 372 GYCESGDVSKAKELFDCMD-------------VLGIERGLISWNSIISGYVRNFMFDEAF 418
Query: 384 QLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
++ M + I+ T + AC+ SL+QG+ +HA + +S+ +VG +LV+M
Sbjct: 419 SMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEM 478
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
YS+C + AQ +F + +V W AL++GY+ L E M PN T+
Sbjct: 479 YSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTW 538
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
+L+ V ++ M++F M+ + P +
Sbjct: 539 NSILAGLVENRQLDLTMQLFSEMQISKLRPDI 570
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 131/538 (24%), Positives = 235/538 (43%), Gaps = 97/538 (18%)
Query: 50 VSWNTMLCGYSKWAKFDESLSLVSTMHRSNV------KLNETTFSTILSVCAQLNSLIDG 103
+ N + K + + +++ +RSN LN + ++++L C + L G
Sbjct: 22 IPHNLTALSFQKLKQAHQPVNISQQKNRSNFSLLDNKPLNTSKYASVLDSC-KCPKL--G 78
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
KQ+H +K+G++ F+ + LL YA C
Sbjct: 79 KQVHAHTIKTGFDADGFIDTKLLQMYARC------------------------------- 107
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
L+ DA +F MP +++ W ++S Y E+A LF+ ++ G + + + F
Sbjct: 108 GLLKDADFLFETMPMRNLHSWKAILSVYLDH-GLFEEAFLLFQVLQFDGVEL-DFFVFPL 165
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
V +AC+ LG+ G+ +HGL+IK F + + ALI+ Y C
Sbjct: 166 VFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKC----------------- 208
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
G ++DA+ + ++ E +S+++NS+I A G V ++ EKM
Sbjct: 209 --------------GSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKM-- 252
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
++ +P N V+W+++I G+ QN E+A+++ M+ + T +
Sbjct: 253 ------KSLDYSMP----NVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAG 302
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ AC+ L L G+ LH ++ + F SN V +LVD+Y RCG + A F S N
Sbjct: 303 VLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKN 362
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V + ++ GY G S+A LF+ M I ++ ++S VR + +E +F+
Sbjct: 363 VLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQ 422
Query: 524 SM-KSYGVVPTLEHYT-------CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+M G+ P + +T C + R G A+ +K + + D V GAL+
Sbjct: 423 NMLMEEGIEP--DSFTLGSVLTACADTISLRQGKEIHAQAIVKGL--QSDTFVGGALV 476
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
S ++ + +C C + G+ +HAH +KT F+++ ++ T L+ MY+RCG + DA F +
Sbjct: 63 SKYASVLDSCKCP---KLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFET 119
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ N+ +W A+++ Y HGL EA LLF+++ + + F V AC G V G
Sbjct: 120 MPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELG 179
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
++ + + + ++D+ G+ G L +A++ + MP E D+V W ++++AC
Sbjct: 180 RQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMP-ERDSVTWNSVITAC 236
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 222/654 (33%), Positives = 346/654 (52%), Gaps = 55/654 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+NG + AR +FDQ+ +T V+W T++ GY+K + SL L + M +NV + S+
Sbjct: 176 KNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSS 235
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C+ L L GKQIH VL+ G E V + L+ FY C ++ +++FD+
Sbjct: 236 VLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQ----- 290
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
M K+++ WT +ISGY ++ E A+KLF M
Sbjct: 291 --------------------------MVVKNIISWTTMISGYMQNSFDWE-AMKLFGEMN 323
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G P+ + SV+ +C A +G+ VH IK E DE + LI+ Y
Sbjct: 324 RLGWK-PDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLL 382
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN----RLTEANSISYNSMIKGY 325
A +V+D + + + N++I G S ++ +A +F+ RL + +++ S++
Sbjct: 383 IDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVS 442
Query: 326 AVYGQVDDSKRL----------FEKMPHRSIISLNTMIS-------VIPEM-ERNPVTWN 367
A ++ SK++ + ++I + + S V EM E++ V WN
Sbjct: 443 ASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWN 502
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+M GY Q+ +E+AL+LY T++ TF+ L A S L SL+ GQ H LVK
Sbjct: 503 AMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM 562
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ +V +LVDMY++CGSI +A+ F+S +V W ++++ ++ HG EA+ +F
Sbjct: 563 GLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMF 622
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
M+++ I PN TFV VLSAC AG V +G+ F SM +G+ P EHY CVV LLGRS
Sbjct: 623 REMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRS 682
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L EA+EFI+ MPIE A+VW +LLSAC N+E+G+ AA+ D K +Y++LS
Sbjct: 683 GKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLS 742
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNV 661
NI+A G W +R R+ EV K+PG SWIE+N++V+ F D + ++
Sbjct: 743 NIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREADI 796
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/594 (23%), Positives = 266/594 (44%), Gaps = 91/594 (15%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-SN 79
N I C ++ ++ AR +FD+MP + +++W++M+ YS+ +E+L + + R S
Sbjct: 65 ANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSG 124
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
NE ++++ C QL + G Q+H V++SG++ +VG+ L+ FY+ IEEA+
Sbjct: 125 EHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEAR 184
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VFD+L E + W+ ++ GY +C + + ++F +M + +VV
Sbjct: 185 LVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVV----------------- 227
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
P+ Y SV+ AC+ L GK +H +++ G E D S+ L
Sbjct: 228 ----------------PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVL 271
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF---NRL------ 310
I+FY C +++D++ + + ++I+G + +A +F NRL
Sbjct: 272 IDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDG 331
Query: 311 ------------------------------TEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
E++ N +I YA + D+K++F+
Sbjct: 332 FACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDV 391
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
M E+N +++N+MI GY +AL+L+ MR + T
Sbjct: 392 MA-----------------EQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLT 434
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
F L + L +L+ + +H ++K +++ G++L+D+YS+C + DA+ F ++
Sbjct: 435 FVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMN 494
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
++ W A+ GY+ H EA+ L+ + PN TF +++A + G +
Sbjct: 495 EKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQ 554
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+ G+ +VD+ + G + EA + + I D V W +++S
Sbjct: 555 FHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMF-NSSIWRDVVCWNSMIS 607
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 240/517 (46%), Gaps = 55/517 (10%)
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
N++ F+ +L + N +I K IH ++ SG + F+ + L+ + ++ A
Sbjct: 22 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 81
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ VFD KMP K+++ W+ ++S Y++
Sbjct: 82 RVVFD-------------------------------KMPHKNLITWSSMVSMYSQQGYSE 110
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
E + R+SGE+ PNE+ SVIRAC +LG +G +HG +++ GF+ D +G +
Sbjct: 111 EALMVFVDLQRKSGEH-PNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 169
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS- 317
LI+FY + A V+D+L ++I G GR + +F ++ E N +
Sbjct: 170 LIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPD 229
Query: 318 ---YNSMIKGYAVYGQVDDSKRLFEKMPHR----SIISLNTMISVIPEMER--------- 361
+S++ ++ ++ K++ + R + +N +I + R
Sbjct: 230 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 289
Query: 362 -----NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
N ++W +MISGY+QN+ +A++L+ M +L + + +C +L+Q
Sbjct: 290 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQ 349
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +HA+ +K ES+ +V L+DMY++ + DA+ F ++ NV ++ A++ GYS
Sbjct: 350 GRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSS 409
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
SEA+ LF M + P+ TFV +L + +I + +GV L
Sbjct: 410 QEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFA 469
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ ++D+ + ++ +A ++M E D VVW A+
Sbjct: 470 GSALIDVYSKCSYVKDARHVFEEMN-EKDIVVWNAMF 505
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 149/310 (48%), Gaps = 32/310 (10%)
Query: 280 ENPCLNASN---------SLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYA 326
ENPCL N +L+ IS I ++I ++ ++++ N +I +
Sbjct: 14 ENPCLQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCS 73
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
+VD+++ +F+KMPH+++I TW+SM+S Y Q E+AL ++
Sbjct: 74 KSDRVDNARVVFDKMPHKNLI-----------------TWSSMVSMYSQQGYSEEALMVF 116
Query: 387 MTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ + RK + + AC+ LG +++G LH +V++ F+ +VYVGTSL+D YS+
Sbjct: 117 VDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSK 176
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
G+I +A+ F +S WT ++ GY+ G + ++ LF M E ++VP+ V
Sbjct: 177 NGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSV 236
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
LSAC + G +I + G + ++D + + + M ++ +
Sbjct: 237 LSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVK-N 295
Query: 566 AVVWGALLSA 575
+ W ++S
Sbjct: 296 IISWTTMISG 305
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
TN + + G + AR +F+ R VV WN+M+ +++ + +E+L + M + +
Sbjct: 571 TNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGI 630
Query: 81 KLNETTFSTILSVCAQLNSLIDG 103
+ N TF +LS C+ + DG
Sbjct: 631 QPNYVTFVAVLSACSHAGRVEDG 653
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 213/687 (31%), Positives = 350/687 (50%), Gaps = 117/687 (17%)
Query: 22 NKAITECGRNGQLVTARNLFDQMP-------------------------------IRTVV 50
N +T G+ G+ AR +FD MP R +V
Sbjct: 45 NHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIV 104
Query: 51 SWNTMLCGYSKWAKFDESLSLVSTMHR--SNVKLNETTFSTILSVCAQLNSLIDGKQIHC 108
S+N ++ G+S +++ + + + S+V+ + T ST++ + L GKQ HC
Sbjct: 105 SYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHC 164
Query: 109 LVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD 168
+L+ G+ FVGS L+ YA + +AKR FDE+ N ++++ M+ G ++C ++ +
Sbjct: 165 QILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEE 224
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSVIRA 227
A +F M +D + WT +++G+ + +G E +AL++FR MR G + ++YTF S++ A
Sbjct: 225 ARRLFEVMTDRDSITWTTMVTGFTQ--NGLESEALEIFRRMRFQGIAI-DQYTFGSILTA 281
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
C L A +GK +H +I+ ++ + +G AL++ Y C +
Sbjct: 282 CGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRS------------------- 322
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
I+ AE +F R+T N IS+ ++I GY G +++ R+F
Sbjct: 323 ------------IKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFS-------- 362
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
EM+R+ ID T + +
Sbjct: 363 ----------EMQRD------------------------------GIDPDDYTLGSVISS 382
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ L SL++G H + + + V +LV +Y +CGSI DA F +S + +W
Sbjct: 383 CANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 442
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
TAL++GY+ G E + LFE ML + + P+ TF+GVLSAC RAG V +G F SM K
Sbjct: 443 TALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQK 502
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+G+VP +HYTC++DL RSG L EAEEFIK MP+ DA+ WG LLSAC +ME+G+
Sbjct: 503 DHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGK 562
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
AA+ + +D + ++YV+L +++A G+W + +R+ + +VKK+PGCSWI+ ++V
Sbjct: 563 WAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKV 622
Query: 647 HAFSVEDRNNPNCNVIYATLEHLTANL 673
H FS +D+++P IY LE L + +
Sbjct: 623 HIFSADDQSHPCSKGIYEKLEWLNSKM 649
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/515 (23%), Positives = 216/515 (41%), Gaps = 115/515 (22%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N IT R + AR LF+ M R ++W TM+ G+++ E+L + M
Sbjct: 206 VVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRF 265
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ +++ TF +IL+ C L++L GKQIH ++++ Y+ FVGS L+ Y+ C I+
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKL 325
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VF + N + W+ ++VGY Q +G
Sbjct: 326 AETVFRRMTCKNIISWTALIVGYGQ---------------------------------NG 352
Query: 198 C-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
C E+A+++F M+ G + P++YT SVI +CA L + EG H L + G ++
Sbjct: 353 CSEEAVRVFSEMQRDGID-PDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVS 411
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
AL+ Y C G IEDA +F+ ++ + +
Sbjct: 412 NALVTLYGKC-------------------------------GSIEDAHRLFDEMSFHDQV 440
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S+ +++ GYA +G+ ++ LFEKM + + + + VT+ ++S +
Sbjct: 441 SWTALVSGYAQFGRAKETIDLFEKMLAKGV-------------KPDGVTFIGVLSACSRA 487
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
EK + +M+K H + P + +
Sbjct: 488 GFVEKGRSYFHSMQK------------------------------DHGI-VPIDDHY--- 513
Query: 437 TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
T ++D+YSR G + +A+ + P+ W L++ G E +LE D
Sbjct: 514 TCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEID- 572
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
N A++V + S G NE ++ R M+ V
Sbjct: 573 PQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQV 607
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 420 LHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
LH +++T P Y+ L+ Y + G A+ F ++ PN+ + AL++ +H
Sbjct: 27 LHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHAR 86
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVG 504
L S+ LF M ++DIV A G
Sbjct: 87 LLSDMEALFASMTQRDIVSYNAVIAG 112
>gi|357482291|ref|XP_003611431.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512766|gb|AES94389.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 735
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 217/679 (31%), Positives = 357/679 (52%), Gaps = 63/679 (9%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V +T ++G + ARNLFD MP R +V++N ML Y + ++ M
Sbjct: 72 VVHWTSMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDMPE 131
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
NV +++ +LS A L + D +++ + + + + GL+ ++EE
Sbjct: 132 RNV----VSWTAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLI----RNGDLEE 183
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++VFD+ + N + W+ M+ GYV+ M DA D+F ++ ++V+ WT +ISGY + V
Sbjct: 184 ARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCR-VGD 242
Query: 198 CEKALKLFRWMRES-------------------------------GENMPNEYTFDSVIR 226
+A +LF+ M E + PNE TF S++
Sbjct: 243 VNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVY 302
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDE---SIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
ACA +G C GK +H +I ++ D+ +G +L+ Y C D A V++ C
Sbjct: 303 ACAGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNC 362
Query: 284 LNAS-NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
+ S NS+ING + G++ A+ +F+ + N I++ MI GY GQV + LF+ MP
Sbjct: 363 DDQSFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMP 422
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
+ +++ + W MI GYVQN L +A+ L+ M ST++
Sbjct: 423 ---------------DSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYA 467
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKT--PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
VLF A + L G LHA +KT +E +VY+ SL+ MY++CG I DA FS+++
Sbjct: 468 VLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMN 527
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ +W +++ G S HG +EA+ ++E MLE + P+A TF+GVL+AC AG V++G +
Sbjct: 528 CRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCE 587
Query: 521 IFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF- 578
+F M Y + P LEHY ++++LGR+G + +AEEF+ +P+E + +WGAL+ C
Sbjct: 588 LFSVMLNDYALQPGLEHYVSIINILGRAGRVKDAEEFVLRLPVEPNHTIWGALIGVCGLS 647
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
+ ++ RAA ++ LD +V L NIYA + ++ +R+ + V+K PGCS
Sbjct: 648 KTDADIARRAATRLLELDPLNAPGHVTLCNIYAANDRHLEETSLRREMRMKGVRKAPGCS 707
Query: 639 WIELNSRVHAFSVEDRNNP 657
WI + +VHAFS DR +P
Sbjct: 708 WILVKGKVHAFSSGDRLDP 726
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 165/400 (41%), Gaps = 104/400 (26%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLV 72
T + +VS N I NG++ A++LFDQ+ R V++W +M+ GY + +E+ L
Sbjct: 191 TPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCRVGDVNEAFRLF 250
Query: 73 STMHRSNV--------------------------------KLNETTFSTILSVCAQLNSL 100
M NV K NE TF +++ CA +
Sbjct: 251 QIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMGFP 310
Query: 101 IDGKQIHCLVLKSGYECFEF---VGSGLLFFYANCFEIEEAKRVFD-------------- 143
GKQ+H ++ + ++ ++ +G L+ Y+ C ++ A+ VF+
Sbjct: 311 CLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQSFNSM 370
Query: 144 --------ELHEDNELL----------WSLMLVGYVQCNLMSDAFDVFIKMP--KKDVVV 183
+LH+ EL W+ M+ GY+ + A ++F MP KD +
Sbjct: 371 INGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSDKDSIA 430
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
WT +I GY ++ + +A+ LF M G + P T+ + A + G +H +
Sbjct: 431 WTLMIYGYVQN-ELIAEAINLFAEMMAQGAS-PINSTYAVLFGAVGSVAYLDLGWQLHAM 488
Query: 244 LIKC--GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
+K +E+D + +LI Y C G IE
Sbjct: 489 QLKTIYEYEYDVYLENSLISMYAKC-------------------------------GEIE 517
Query: 302 DAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
DA IF+ + + IS+NSMI G + +G+ +++ ++E M
Sbjct: 518 DAYRIFSNMNCRDKISWNSMIMGLSDHGRANEALNMYETM 557
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+L+A Q +T+ E + N I+ + G++ A +F M R +SWN+M+ G S
Sbjct: 484 QLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLSD 543
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL 111
+ +E+L++ TM V + TF +L+ CA + G ++ ++L
Sbjct: 544 HGRANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVML 593
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 222/689 (32%), Positives = 352/689 (51%), Gaps = 64/689 (9%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYS 60
+YA + + Q +I T IT G L AR +F++ P+ R V +N M+ GYS
Sbjct: 65 VYARKLFDEIPQPDVIARTT-LITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYS 123
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQ---IHCLVLKSGYEC 117
++ L M +N + ++ TF+++LS + D +Q +H V+K G E
Sbjct: 124 HMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLI--FYDERQCGQMHGTVVKFGIEI 181
Query: 118 FEFVGSGLLFFYANC---------FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD 168
F V + LL Y C + A+++FDE+ + NE +W+ ++ GYV+ ++
Sbjct: 182 FPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTG 241
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A ++ M ++ + W +ISGY E AL LFR MR G + +E T+ SVI AC
Sbjct: 242 AREILDTMTEQPGIAWNAMISGYLHH-GLFEDALTLFRKMRLLGVQV-DESTYTSVISAC 299
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A G F GK VH ++K D L+ N
Sbjct: 300 ADGGFFLLGKQVHAYILKNELNPDRDF---------------------------LLSVGN 332
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
+LI G+++ A IF + + I++N+++ GY G+++++K F +MP
Sbjct: 333 TLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMP------ 386
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
E+N +TW MISG QN E+AL+L+ M+ + F+ AC
Sbjct: 387 -----------EKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITAC 435
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
S LG+L+ G+ LHA +V +S + VG +++ MY+RCG + A+ F ++ + +W
Sbjct: 436 SVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWN 495
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KS 527
+++ HG G +A+ L+E ML++ I+P+ TF+ VLSAC AGLV EG + F SM ++
Sbjct: 496 SMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLEN 555
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
YG+ P +HY ++DL R+G +A+ I MP E A +W ALL+ C NM++G
Sbjct: 556 YGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIE 615
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVH 647
AA+K+F L + YV+LSN+YA LG+W RK + VKK+P CSW E+ ++VH
Sbjct: 616 AAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVH 675
Query: 648 AFSVEDRNNPNCNVIYATLEHLTANLNSV 676
F V+D +P IY LE L + +
Sbjct: 676 VFLVDDTVHPEVLSIYNYLEKLNLEMKKI 704
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 180/476 (37%), Gaps = 132/476 (27%)
Query: 231 LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSL 290
L ++ + VHG +I GF+ I LI+ Y F A +++D + P + A +L
Sbjct: 26 LSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTL 85
Query: 291 INGLISMGRIEDAELIFNR--LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP------ 342
I ++G ++ A IFN L +++ YN+MI GY+ + LF M
Sbjct: 86 ITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQP 145
Query: 343 -------------------------HRSIIS---------LNTMISV------------- 355
H +++ LN ++SV
Sbjct: 146 DDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSS 205
Query: 356 ---------IPEMER-NPVTWNSMISGYVQN----------------------------- 376
EM + N W ++I+GYV+N
Sbjct: 206 SLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYL 265
Query: 377 --NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN-- 432
L E AL L+ MR L + ST++ + AC+ G G+ +HA+++K +
Sbjct: 266 HHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRD 325
Query: 433 --VYVGTSLVDMYSRCGSIN-------------------------------DAQASFSSI 459
+ VG +L+ +Y + G ++ +A++ F+ +
Sbjct: 326 FLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQM 385
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
N+ WT +++G + +G G +A+ LF M PN F G ++AC G + G
Sbjct: 386 PEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGR 445
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ + G TL ++ + R G + A MP +D V W ++++A
Sbjct: 446 QLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPF-VDPVSWNSMIAA 500
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 219/683 (32%), Positives = 354/683 (51%), Gaps = 65/683 (9%)
Query: 8 SQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKF 65
+ TL + VS + +L A + FD +P R V N ++ Y++ +
Sbjct: 78 AATLFCADPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHA 137
Query: 66 DESLSLVSTMHRS-NVKLNETTFSTILSVCAQLN--SLIDGKQIHCLVLKSGYECFEFVG 122
++++ ++ S +++ ++ +F+ +LS L S+ Q+HC VLKSG V
Sbjct: 138 APAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVC 197
Query: 123 SGLLFFYANCFEIE---EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
+ L+ Y C E +A++V DE+ ++L W+ M+VGYV+ + A VF ++ K
Sbjct: 198 NALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGK 257
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP-NEYTFDSVIRACARLGAFCEGK 238
VVW +ISGY S E A +LFR M E +P +E+TF SV+ ACA +G F GK
Sbjct: 258 FDVVWNAMISGYVHSGMAVE-AFELFRRMVL--ERVPLDEFTFTSVLSACANVGLFAHGK 314
Query: 239 VVHGLLIKCGFEFDE----SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
VHG +I+ F + AL+ FY C
Sbjct: 315 SVHGQIIRLQPNFVPEAALPVNNALVTFYSKC---------------------------- 346
Query: 295 ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
G I A IF+ +T + +S+N+++ GY +D + +FE+MP++
Sbjct: 347 ---GNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK---------- 393
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
N ++W M+SGYV E AL+L+ MR + T++ AC LG+L
Sbjct: 394 -------NELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGAL 446
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ G+ LH H+V+ FE + G +L+ MY+RCG++ +A F + + + +W A+++
Sbjct: 447 KHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISAL 506
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPT 533
HG G EA+ LF+ M+ + I P+ +F+ VL+AC +GLV+EG + F SMK +G++P
Sbjct: 507 GQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPG 566
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
+HYT ++DLLGR+G + EA + IK MP E +W A+LS C +ME+G AA ++F
Sbjct: 567 EDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLF 626
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
+ + Y++LSN Y+ G W +RK + VKK+PGCSWIE ++VH F V D
Sbjct: 627 KMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGD 686
Query: 654 RNNPNCNVIYATLEHLTANLNSV 676
+P + +Y LE + A + +
Sbjct: 687 TKHPEAHEVYKFLEMVGAKMRKL 709
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 216/679 (31%), Positives = 353/679 (51%), Gaps = 57/679 (8%)
Query: 8 SQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKF 65
+ TL + V+ + G+L A + FD +P R V N ++ Y++ +
Sbjct: 78 AATLFRADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHA 137
Query: 66 DESLSLVSTMHRS-NVKLNETTFSTILSVCAQLN--SLIDGKQIHCLVLKSGYECFEFVG 122
++++ ++ S +++ ++ +F+ +LS L S+ Q+ C VLKSG V
Sbjct: 138 APAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVS 197
Query: 123 SGLLFFYANCFEIE---EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
+ L+ Y C +E +A++V DE+ + + L W+ M+VGYV+ + A VF ++ K
Sbjct: 198 NALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVK 257
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP-NEYTFDSVIRACARLGAFCEGK 238
VVW +ISGY S E A +LFR M E +P +E+TF SV+ ACA G F GK
Sbjct: 258 FDVVWNAMISGYVHSGMVVE-AFELFRRMVL--ERVPLDEFTFTSVLSACANAGFFAHGK 314
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
VHG + + F + L +N+L+ G
Sbjct: 315 SVHGQITRLQPNF---------------------------VPEAALPVNNALVTLYSKCG 347
Query: 299 RIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE 358
I A IF+ + + +S+N+++ GY +D + +FE+MP++
Sbjct: 348 NIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK-------------- 393
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
N ++W M+SGYV E AL+L+ MR + T++ AC LGSL+ G+
Sbjct: 394 ---NELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGK 450
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
LH HLV+ FE + G +L+ MY+RCG++ +A F + + + +W A+++ HG
Sbjct: 451 QLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHG 510
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHY 537
G EA+ LF+ M+ + I P+ +F+ VL+AC +GLV+EG + F SMK +G++P +HY
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHY 570
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
T ++DLLGR+G + EA + IK MP E +W A+LS C +ME+G AA ++F +
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTP 630
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+ Y++LSN Y+ G+W +RK + VKK+PGCSWIE ++VH F V D +P
Sbjct: 631 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHP 690
Query: 658 NCNVIYATLEHLTANLNSV 676
+ +Y LE + A + +
Sbjct: 691 EAHKVYKFLEMVGARMRKL 709
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 75/281 (26%)
Query: 6 TQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKF 65
T+ Q E + N +T + G + AR +FD M + VVSWNT+L GY + +
Sbjct: 321 TRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCL 380
Query: 66 D-------------------------------ESLSLVSTMHRSNVKLNETTFSTILSVC 94
D ++L L + M +VK + T++ +S C
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISAC 440
Query: 95 AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
+L SL GKQ+H +++ G+E G+ L+ YA C ++EA
Sbjct: 441 GELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEA---------------- 484
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN 214
NLM F+ MP D V W +IS + G E AL+LF M G
Sbjct: 485 ---------NLM------FLVMPNIDSVSWNAMISALGQHGHGRE-ALELFDRMVAEG-I 527
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
P+ +F +V+ AC H L+ GF++ ES+
Sbjct: 528 YPDRISFLTVLTACN-----------HSGLVDEGFQYFESM 557
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 218/670 (32%), Positives = 355/670 (52%), Gaps = 56/670 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R+ +L++A +F M R VS+N+++ G + D +L L + M R +K + T ++
Sbjct: 308 RSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVAS 367
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS CA + +L G Q+H +K+G + LL Y+ C ++E A + F
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF------- 420
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ +++V+W ++ Y + +D + ++FR M+
Sbjct: 421 ------------------------LXTETENIVLWNVMLVAYGQ-LDNLSDSFEIFRQMQ 455
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G +PN++T+ S++R C LGA G+ +H +IK GF+ + + LI+ Y
Sbjct: 456 MEGM-IPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQL 514
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN----RLTEANSISYNSMI--- 322
A+R+ RL + + ++I G + +A +F R + ++I + S I
Sbjct: 515 ALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC 574
Query: 323 -------KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------ERNPVTWN 367
+G ++ Q + + + ++ISL I E ++N ++WN
Sbjct: 575 AGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWN 634
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
S++SG Q+ E+ALQ+++ M + + T+ A + L +++QGQ +H+ ++KT
Sbjct: 635 SLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKT 694
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
++S V SL+ +Y++ GSI+DA F+ +S NV +W A++ GYS HG G EA+ LF
Sbjct: 695 GYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLF 754
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
E M I+PN TFVGVLSAC GLV EG+ F SM K + +VP EHY CVVDLLGR
Sbjct: 755 EEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGR 814
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G L A E+IK+MPI DA++W LLSAC N+E+GERAA + L+ + + YV++
Sbjct: 815 AGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLI 874
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SNIYAV +W + RK + VKK+PG SWIE+ + VHAF D+ +P N IY +
Sbjct: 875 SNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYI 934
Query: 667 EHLTANLNSV 676
HL + +
Sbjct: 935 GHLNRRTSEI 944
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 150/599 (25%), Positives = 263/599 (43%), Gaps = 61/599 (10%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
M+L+ S++ E L++ + + R+G A +FD+ R+V SWN M+ +
Sbjct: 78 MRLHCRISKSGFDGEPLLIDS--LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFV 135
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG-KQIHCLVLKSGYECFE 119
+ L M + N TF+ +L C + + KQ+H G++
Sbjct: 136 AQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSP 195
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
V + L+ Y+ IE AK+VF+ C M K
Sbjct: 196 LVANLLIDLYSKNGYIESAKKVFN-------------------CICM------------K 224
Query: 180 DVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
D+V W +ISG ++ +G E+ A+ LF M S E P Y SV+ A ++ F G+
Sbjct: 225 DIVTWVAMISGLSQ--NGLEEEAILLFCDMHAS-EIFPTPYVLSSVLSASTKIQLFELGE 281
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+H L+IK GF + + L+ Y A R++ + + + NSLI+GL+ G
Sbjct: 282 QLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 341
Query: 299 RIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEK-----MPHRSII-- 347
+ A +F ++ + + I+ S++ A G + +L M I+
Sbjct: 342 FSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEG 401
Query: 348 SLNTMISVIPEME-----------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
SL + S ++E N V WN M+ Y Q + + +++ M+ +
Sbjct: 402 SLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP 461
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ T+ + C+ LG+L G+ +H H++KT F+ NVYV + L+DMY++ G + A
Sbjct: 462 NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRIL 521
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+ +V +WTA++ GY H + SEA+ LFE M + I + F +SAC +
Sbjct: 522 RRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALR 581
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+G +I + G L ++ L R G + EA + + + + + W +L+S
Sbjct: 582 QGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLVSG 639
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/538 (23%), Positives = 231/538 (42%), Gaps = 69/538 (12%)
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
+ + L++ M V+ N + +L C SL + ++HC + KSG++ + L+
Sbjct: 41 KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
Y + A +VFDE + W+ M+ +V F VF
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVA---QKSNFQVFC------------ 145
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG-AFCEGKVVHGLLI 245
LFR M G PN YTF V++AC AF K VH
Sbjct: 146 -----------------LFRRMLAEGIT-PNGYTFAGVLKACVGGDIAFNYVKQVHSRTF 187
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
GF+ + LI+ Y + A +V++ + + ++I+GL G E+A L
Sbjct: 188 YYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAIL 247
Query: 306 IFNRLTE----------ANSISYNSMIKGYAVYGQV----------------DDSKRLFE 339
+F + ++ +S ++ I+ + + Q+ + L+
Sbjct: 248 LFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYS 307
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+ R +IS + S + R+ V++NS+ISG VQ ++AL+L+ M++ +
Sbjct: 308 R--SRKLISAERIFSTMN--SRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T + L AC+ +G+L +G LH+H +K +++ + SL+D+YS+C + A F
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXT 423
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+ N+ W ++ Y S++ +F M + ++PN T+ +L C G + G
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 520 KIFRSMKSYGVVPTLEHYTC--VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+I + G L Y C ++D+ + G L A ++ +P E D V W A+++
Sbjct: 484 QIHTHVIKTGF--QLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAG 538
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ R G++ A F+++ + +SWN+++ G ++ F+E+L + M R+ +
Sbjct: 603 NALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAE 662
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+N T+ + +S A L ++ G+QIH +VLK+GY+ V + L+ YA I +A R
Sbjct: 663 VNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWRE 722
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-K 200
F+++ E N + W+ M+ GY Q GC +
Sbjct: 723 FNDMSERNVISWNAMITGYSQ---------------------------------HGCGME 749
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
AL+LF M+ G MPN TF V+ AC+ +G EG
Sbjct: 750 ALRLFEEMKVCGI-MPNHVTFVGVLSACSHIGLVKEG 785
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 7/207 (3%)
Query: 375 QNNLH-----EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
Q LH K +QL M + + + L C GSL + LH + K+ F
Sbjct: 30 QTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGF 89
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ + SLVD Y R G + A F S+ +V +W +++ + + LF
Sbjct: 90 DGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRR 149
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSG 548
ML + I PN TF GVL ACV + +K S YG + ++DL ++G
Sbjct: 150 MLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNG 209
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSA 575
++ A++ + ++ D V W A++S
Sbjct: 210 YIESAKKVFNCICMK-DIVTWVAMISG 235
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I+ ++G + A F+ M R V+SWN M+ GYS+ E+L L M +
Sbjct: 703 SNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGI 762
Query: 81 KLNETTFSTILSVCAQLNSLIDGK-------QIHCLVLKS 113
N TF +LS C+ + + +G +IH LV KS
Sbjct: 763 MPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKS 802
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 216/705 (30%), Positives = 370/705 (52%), Gaps = 63/705 (8%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V+ N I+ +NG++ AR LFD MP R +VSWN+M+ Y + +E+ L M
Sbjct: 47 VTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTR 106
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
++ +++ +++ + L + + L+ Y+ + ++ YA + +EA
Sbjct: 107 DL----YSWTLMITCYTRNGELAKARNLFNLL---PYKWNPVCCNAMVAGYAKNRQFDEA 159
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+R+FD + + + W+ ML GY + M F +M ++DVV W ++ G+ + V
Sbjct: 160 RRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVE-VGDL 218
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRAC--ARLGAFCEGK----------------VV 240
+ + F E +PN T V C AR G E + ++
Sbjct: 219 NSSWEFF-------EKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMI 271
Query: 241 HGLLIKCGFEFDESIG-------------GALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
+ C DE+I +I Y D A ++ +++ + A
Sbjct: 272 AAYVQNC--HVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQ 329
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
++I+G + R++DA IFN+++ + + +N+MI GY+ G++D++ LF++M + I+
Sbjct: 330 TAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIV 389
Query: 348 SLNTM-------------ISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
S NTM I + EM E+N V+WNS+ISG QN + AL+ +M M
Sbjct: 390 SWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEG 449
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+STF+ +C+ L +LQ G+ LH ++K+ + ++++V +L+ MY++CGSI+ A+
Sbjct: 450 QKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAE 509
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F I +V +W +L+ Y+ +G G EA+ LF M + + P+ TFVG+LSAC G
Sbjct: 510 LLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVG 569
Query: 514 LVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
L+++G+K+F+ M ++Y + P EHY C+VDLLGR+G L EA + ++ M I +A +WGAL
Sbjct: 570 LIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGAL 629
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
L AC N+E+ + AA+K+ + S YV+LSN+ A G+W + +R+ + +
Sbjct: 630 LGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAE 689
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSVV 677
K PG SWIEL +RVHAF ED +P + L LTA++ +
Sbjct: 690 KQPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSLTAHMRNTA 734
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 208/414 (50%), Gaps = 39/414 (9%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+I+EA +VF + N + + M+ + + +SDA +F MP++++V W +I+ Y
Sbjct: 30 QIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLH 89
Query: 194 SVDGCEKALKLFRWMRESGENMPNE--YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
+ D E+A +LF + MP Y++ +I R G + + + LL +++
Sbjct: 90 N-DRVEEARQLF-------DKMPTRDLYSWTLMITCYTRNGELAKARNLFNLL---PYKW 138
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
+ A++ Y FD A R++D + L + NS++ G G + F +
Sbjct: 139 NPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMA 198
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPE 358
E + +S+N M+ G+ G ++ S FEK+P+ + +S TM+ + +
Sbjct: 199 ERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQ 258
Query: 359 ME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
M RN V WN+MI+ YVQN ++A+ L+M M ++ +++ + + +G L +
Sbjct: 259 MPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP----EKNSISWTTVINGYVRMGKLDEA 314
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+ L L + P+ NV T+++ Y + ++DA+ F+ IS +V W ++ GYS
Sbjct: 315 RQL---LNQMPYR-NVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQC 370
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
G EA+ LF+ M+++DIV ++ ++++ + G ++ +KIF MK +V
Sbjct: 371 GRMDEALHLFKQMVKKDIV----SWNTMVASYAQVGQMDAAIKIFEEMKEKNIV 420
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 146/309 (47%), Gaps = 35/309 (11%)
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
D A++V+ + + NS+I+ GRI DA +F+ + + N +S+NSMI Y
Sbjct: 32 DEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHND 91
Query: 330 QVDDSKRLFEKMPHRSIISLNTMIS----------------VIPEMERNPVTWNSMISGY 373
+V+++++LF+KMP R + S MI+ ++P + NPV N+M++GY
Sbjct: 92 RVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLP-YKWNPVCCNAMVAGY 150
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL-LHAHLVKTPFESN 432
+N ++A +L+ M + S + G + G++ L + E +
Sbjct: 151 AKNRQFDEARRLFDAMPAKDLVSWNSMLT---------GYTRNGEMRLGLQFFEEMAERD 201
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V +VD + G +N + F I +PN +W ++ G++ G +EA LF+ M
Sbjct: 202 VVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQM-- 259
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ N + +++A V+ V+E + +F M + +T V++ R G L E
Sbjct: 260 --PIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSIS----WTTVINGYVRMGKLDE 313
Query: 553 AEEFIKDMP 561
A + + MP
Sbjct: 314 ARQLLNQMP 322
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 159/328 (48%), Gaps = 36/328 (10%)
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N I L G+I++A +F +T N++++NSMI +A G++ D+++LF+ MP R+I+
Sbjct: 19 NLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIV 78
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
S WNSMI+ Y+ N+ E+A QL+ M R +++++
Sbjct: 79 S-----------------WNSMIAAYLHNDRVEEARQLFDKMPT----RDLYSWTLMITC 117
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
+ G L + + L L P++ N ++V Y++ ++A+ F ++ + ++ +W
Sbjct: 118 YTRNGELAKARNLFNLL---PYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSW 174
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
+++ GY+ +G + FE M E+D+V ++ ++ V G +N + F + +
Sbjct: 175 NSMLTGYTRNGEMRLGLQFFEEMAERDVV----SWNLMVDGFVEVGDLNSSWEFFEKIPN 230
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
P + ++ R G + EA MPI + V W A+++A + N V E
Sbjct: 231 ----PNTVSWVTMLCGFARFGKIAEARRLFDQMPIR-NVVAWNAMIAA--YVQNCHVDEA 283
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGK 615
+ M +K IS + + N Y +GK
Sbjct: 284 ISLFMEMPEKNSIS-WTTVINGYVRMGK 310
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 207/668 (30%), Positives = 354/668 (52%), Gaps = 56/668 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L++A ++F M R V++NT++ G S+ ++++ L MH ++ + T ++++
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ +L G+Q+H K G+ + LL YA C +IE A
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA------------- 443
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
D F++ ++VV+W ++ Y +D + ++FR M+
Sbjct: 444 ------------------LDYFLETEVENVVLWNVMLVAYGL-LDDLRNSFRIFRQMQIE 484
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
E +PN+YT+ S+++ C RLG G+ +H +IK F+ + + LI+ Y D
Sbjct: 485 -EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 543
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----------ANSIS---- 317
A + R + + ++I G + A F ++ + N++S
Sbjct: 544 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 603
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE----MER----NPVTWNSM 369
++ +G ++ Q S + ++++L + I E E+ + + WN++
Sbjct: 604 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNAL 663
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+SG+ Q+ +E+AL++++ M + ID TF A S +++QG+ +HA + KT +
Sbjct: 664 VSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 723
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+S V +L+ MY++CGSI+DA+ F +S+ N +W A++N YS HG GSEA+ F+
Sbjct: 724 DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQ 783
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSG 548
M+ ++ PN T VGVLSAC GLV++G+ F SM S YG+ P EHY CVVD+L R+G
Sbjct: 784 MIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAG 843
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L A+EFI++MPI+ DA+VW LLSAC NME+GE AA + L+ + + YV+LSN
Sbjct: 844 LLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN 903
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YAV KW + R+++ VKK+PG SWIE+ + +H+F V D+N+P + I+ +
Sbjct: 904 LYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQD 963
Query: 669 LTANLNSV 676
LT + +
Sbjct: 964 LTKRASEI 971
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 149/568 (26%), Positives = 240/568 (42%), Gaps = 59/568 (10%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A +FD+MP RT+ +WN M+ + E L M NV NE TFS +L
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 92 SVCAQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
C + D +QIH +L G V + L+ Y+ ++ A+RVFD L
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR---- 249
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMR 209
KD W +ISG +K + CE +A++LF M
Sbjct: 250 ---------------------------LKDHSSWVAMISGLSK--NECEAEAIRLFCDMY 280
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G MP Y F SV+ AC ++ + G+ +HGL++K GF D + AL+ Y
Sbjct: 281 VLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 339
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGY 325
A ++ + N+LINGL G E A +F R+ E +S + S++
Sbjct: 340 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLN-----------------TMISVIPEME-RNPVTWN 367
+ G + ++L S N T + E E N V WN
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
M+ Y + + +++ M+ I + T+ + C LG L+ G+ +H+ ++KT
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F+ N YV + L+DMY++ G ++ A + +V +WT ++ GY+ + +A+ F
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
ML++ I + +SAC + EG +I G L +V L R
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 639
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + E+ + D + W AL+S
Sbjct: 640 GKIEESYLAFEQTEAG-DNIAWNALVSG 666
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 144/587 (24%), Positives = 257/587 (43%), Gaps = 72/587 (12%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V N I RNG + AR +FD + ++ SW M+ G SK E++ L M+
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 282
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ FS++LS C ++ SL G+Q+H LVLK G+ +V + L+ Y + + A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +F + + + + ++ ++ G QC GY
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQC--------------------------GYG------ 370
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
EKA++LF+ M G P+ T S++ AC+ G G+ +H K GF + I GA
Sbjct: 371 EKAMELFKRMHLDGLE-PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE------ 312
L+ Y C + A+ + E + N + L++ G ++D F +
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVM---LVAYGLLDDLRNSFRIFRQMQIEEI 486
Query: 313 -ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-----SVIPEM------- 359
N +Y S++K G ++ +++ H II N + SV+ +M
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQI-----HSQIIKTNFQLNAYVCSVLIDMYAKLGKL 541
Query: 360 -----------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
++ V+W +MI+GY Q N +KAL + M I + AC
Sbjct: 542 DTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC 601
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ L +L++GQ +HA + F S++ +LV +YSRCG I ++ +F + + AW
Sbjct: 602 AGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWN 661
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
AL++G+ G EA+ +F M + I N TF + A + +G ++ +
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G E ++ + + G + +AE+ ++ + + V W A+++A
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINA 767
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 137/588 (23%), Positives = 237/588 (40%), Gaps = 113/588 (19%)
Query: 43 QMPIRTVVSWNTMLCGYSKWAKF---------DESLS--LVSTMHRSNVKLNETTFSTIL 91
++ RTV LCG ++ A F DES + ++ ++ N T +L
Sbjct: 36 KLKTRTVFP---TLCG-TRRASFAAISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLL 91
Query: 92 SVCAQLN-SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
C + N SL +G+++H +LK G + + L FY ++ A +VFDE+ E
Sbjct: 92 EGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTI 151
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
W+ M+ NL+ + F +F++M ++V
Sbjct: 152 FTWNKMIKELASRNLIGEVFGLFVRMVSENVT---------------------------- 183
Query: 211 SGENMPNEYTFDSVIRACARLG--AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
PNE TF V+ AC R G AF + +H ++ G + LI+ Y
Sbjct: 184 -----PNEGTFSGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGF 237
Query: 269 FDGAMRVYDRL----------------ENPCLNASNSLINGLISMG-------------- 298
D A RV+D L +N C + L + +G
Sbjct: 238 VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 297
Query: 299 --RIEDAE-------LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
+IE E L+ +++ N+++ Y G + ++ +F M
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS------- 350
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
+R+ VT+N++I+G Q EKA++L+ M ++ +T + L ACS
Sbjct: 351 ----------QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
G+L +GQ LHA+ K F SN + +L+++Y++C I A F NV W
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
++ Y + +F M ++IVPN T+ +L C+R G + G +I +
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 530 VVPTLEHYTC--VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
L Y C ++D+ + G L A + + + D V W +++
Sbjct: 521 F--QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 565
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 83/160 (51%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T R G++ + F+Q ++WN ++ G+ + +E+L + M+R +
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
N TF + + ++ ++ GKQ+H ++ K+GY+ V + L+ YA C I +A++
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
F E+ NE+ W+ ++ Y + S+A D F +M +V
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNV 789
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 33/190 (17%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+++A ++T ET + N I+ + G + A F ++ + VSWN ++ YSK
Sbjct: 713 QVHAVITKTGYDSETEVC--NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
E+L M SNV+ N T +LS C+ H ++ G FE +
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS-----------HIGLVDKGIAYFESM 819
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKD 180
S Y + E V D L + L+S A + +MP K D
Sbjct: 820 NSE----YGLSPKPEHYVCVVDML---------------TRAGLLSRAKEFIQEMPIKPD 860
Query: 181 VVVWTKLISG 190
+VW L+S
Sbjct: 861 ALVWRTLLSA 870
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 207/668 (30%), Positives = 354/668 (52%), Gaps = 56/668 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L++A ++F M R V++NT++ G S+ ++++ L MH ++ + T ++++
Sbjct: 297 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 356
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ +L G+Q+H K G+ + LL YA C +IE A
Sbjct: 357 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA------------- 403
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
D F++ ++VV+W ++ Y +D + ++FR M+
Sbjct: 404 ------------------LDYFLETEVENVVLWNVMLVAYGL-LDDLRNSFRIFRQMQIE 444
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
E +PN+YT+ S+++ C RLG G+ +H +IK F+ + + LI+ Y D
Sbjct: 445 -EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 503
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----------ANSIS---- 317
A + R + + ++I G + A F ++ + N++S
Sbjct: 504 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 563
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE----MER----NPVTWNSM 369
++ +G ++ Q S + ++++L + I E E+ + + WN++
Sbjct: 564 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNAL 623
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+SG+ Q+ +E+AL++++ M + ID TF A S +++QG+ +HA + KT +
Sbjct: 624 VSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 683
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+S V +L+ MY++CGSI+DA+ F +S+ N +W A++N YS HG GSEA+ F+
Sbjct: 684 DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQ 743
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSG 548
M+ ++ PN T VGVLSAC GLV++G+ F SM S YG+ P EHY CVVD+L R+G
Sbjct: 744 MIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAG 803
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L A+EFI++MPI+ DA+VW LLSAC NME+GE AA + L+ + + YV+LSN
Sbjct: 804 LLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN 863
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YAV KW + R+++ VKK+PG SWIE+ + +H+F V D+N+P + I+ +
Sbjct: 864 LYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQD 923
Query: 669 LTANLNSV 676
LT + +
Sbjct: 924 LTKRASEI 931
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 149/568 (26%), Positives = 240/568 (42%), Gaps = 59/568 (10%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A +FD+MP RT+ +WN M+ + E L M NV NE TFS +L
Sbjct: 94 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 153
Query: 92 SVCAQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
C + D +QIH +L G V + L+ Y+ ++ A+RVFD L
Sbjct: 154 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR---- 209
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMR 209
KD W +ISG +K + CE +A++LF M
Sbjct: 210 ---------------------------LKDHSSWVAMISGLSK--NECEAEAIRLFCDMY 240
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G MP Y F SV+ AC ++ + G+ +HGL++K GF D + AL+ Y
Sbjct: 241 VLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 299
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGY 325
A ++ + N+LINGL G E A +F R+ E +S + S++
Sbjct: 300 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 359
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLN-----------------TMISVIPEME-RNPVTWN 367
+ G + ++L S N T + E E N V WN
Sbjct: 360 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 419
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
M+ Y + + +++ M+ I + T+ + C LG L+ G+ +H+ ++KT
Sbjct: 420 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 479
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F+ N YV + L+DMY++ G ++ A + +V +WT ++ GY+ + +A+ F
Sbjct: 480 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 539
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
ML++ I + +SAC + EG +I G L +V L R
Sbjct: 540 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 599
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + E+ + D + W AL+S
Sbjct: 600 GKIEESYLAFEQTEAG-DNIAWNALVSG 626
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 144/587 (24%), Positives = 257/587 (43%), Gaps = 72/587 (12%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V N I RNG + AR +FD + ++ SW M+ G SK E++ L M+
Sbjct: 183 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 242
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ FS++LS C ++ SL G+Q+H LVLK G+ +V + L+ Y + + A
Sbjct: 243 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 302
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +F + + + + ++ ++ G QC GY
Sbjct: 303 EHIFSNMSQRDAVTYNTLINGLSQC--------------------------GYG------ 330
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
EKA++LF+ M G P+ T S++ AC+ G G+ +H K GF + I GA
Sbjct: 331 EKAMELFKRMHLDGLE-PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 389
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE------ 312
L+ Y C + A+ + E + N + L++ G ++D F +
Sbjct: 390 LLNLYAKCADIETALDYFLETEVENVVLWNVM---LVAYGLLDDLRNSFRIFRQMQIEEI 446
Query: 313 -ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-----SVIPEM------- 359
N +Y S++K G ++ +++ H II N + SV+ +M
Sbjct: 447 VPNQYTYPSILKTCIRLGDLELGEQI-----HSQIIKTNFQLNAYVCSVLIDMYAKLGKL 501
Query: 360 -----------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
++ V+W +MI+GY Q N +KAL + M I + AC
Sbjct: 502 DTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC 561
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ L +L++GQ +HA + F S++ +LV +YSRCG I ++ +F + + AW
Sbjct: 562 AGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWN 621
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
AL++G+ G EA+ +F M + I N TF + A + +G ++ +
Sbjct: 622 ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 681
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G E ++ + + G + +AE+ ++ + + V W A+++A
Sbjct: 682 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINA 727
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 129/556 (23%), Positives = 225/556 (40%), Gaps = 100/556 (17%)
Query: 66 DESLS--LVSTMHRSNVKLNETTFSTILSVCAQLN-SLIDGKQIHCLVLKSGYECFEFVG 122
DES + ++ ++ N T +L C + N SL +G+++H +LK G + +
Sbjct: 24 DESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLS 83
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
L FY ++ A +VFDE+ E W+ M+ NL+ + F +F++M ++V
Sbjct: 84 EKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVT 143
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG--AFCEGKVV 240
PNE TF V+ AC R G AF + +
Sbjct: 144 ---------------------------------PNEGTFSGVLEAC-RGGSVAFDVVEQI 169
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL----------------ENPCL 284
H ++ G + LI+ Y D A RV+D L +N C
Sbjct: 170 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 229
Query: 285 NASNSLINGLISMG----------------RIEDAE-------LIFNRLTEANSISYNSM 321
+ L + +G +IE E L+ +++ N++
Sbjct: 230 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 289
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK 381
+ Y G + ++ +F M +R+ VT+N++I+G Q EK
Sbjct: 290 VSLYFHLGNLISAEHIFSNMS-----------------QRDAVTYNTLINGLSQCGYGEK 332
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
A++L+ M ++ +T + L ACS G+L +GQ LHA+ K F SN + +L++
Sbjct: 333 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 392
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
+Y++C I A F NV W ++ Y + +F M ++IVPN T
Sbjct: 393 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 452
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC--VVDLLGRSGHLHEAEEFIKD 559
+ +L C+R G + G +I + L Y C ++D+ + G L A + +
Sbjct: 453 YPSILKTCIRLGDLELGEQIHSQIIKTNF--QLNAYVCSVLIDMYAKLGKLDTAWDILIR 510
Query: 560 MPIELDAVVWGALLSA 575
+ D V W +++
Sbjct: 511 FAGK-DVVSWTTMIAG 525
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 83/160 (51%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T R G++ + F+Q ++WN ++ G+ + +E+L + M+R +
Sbjct: 590 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 649
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
N TF + + ++ ++ GKQ+H ++ K+GY+ V + L+ YA C I +A++
Sbjct: 650 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 709
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
F E+ NE+ W+ ++ Y + S+A D F +M +V
Sbjct: 710 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNV 749
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 33/190 (17%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+++A ++T ET + N I+ + G + A F ++ + VSWN ++ YSK
Sbjct: 673 QVHAVITKTGYDSETEVC--NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 730
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
E+L M SNV+ N T +LS C+ H ++ G FE +
Sbjct: 731 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS-----------HIGLVDKGIAYFESM 779
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKD 180
S Y + E V D L + L+S A + +MP K D
Sbjct: 780 NSE----YGLSPKPEHYVCVVDML---------------TRAGLLSRAKEFIQEMPIKPD 820
Query: 181 VVVWTKLISG 190
+VW L+S
Sbjct: 821 ALVWRTLLSA 830
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 209/652 (32%), Positives = 344/652 (52%), Gaps = 67/652 (10%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N I+ RN + ARNLFDQMP R + SWN ML GY + + ++ L M
Sbjct: 81 VSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEK 140
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+V +++++LS AQ + + ++ V + E +GLL Y + IEEA
Sbjct: 141 DV----VSWNSLLSGYAQNGYVDEARE----VFDNMPEKNSISWNGLLAAYVHNGRIEEA 192
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+F+ + + + W+ ++ G+V+ + DA +F KMP +D + W +ISGYA+ G
Sbjct: 193 CLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQG-GGL 251
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+A +LF +S R A G V +G+L
Sbjct: 252 SQARRLFD---------------ESPTRDVFTWTAMVSGYVQNGML-------------- 282
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
D A +D + + N++I G + +++ A +F + N S+
Sbjct: 283 -----------DEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSW 331
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+MI GY G + +++ F+ MP +R+ V+W ++I+GY Q+
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMP-----------------QRDCVSWAAIIAGYAQSGH 374
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+E+AL +++ +++ R+TF C+ + +L+ G+ +H VK + + +VG +
Sbjct: 375 YEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNA 434
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+ MY +CGSI++A +F I +V +W ++ GY+ HG G +A+ +FE M + P+
Sbjct: 435 LLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPD 494
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
T VGVLSAC GL++ G + F SM K YGV+PT +HYTC++DLLGR+G L EA++ I
Sbjct: 495 EITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLI 554
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
++MP + A WGALL A N E+GE+AA+ +F ++ + YV+LSN+YA G+W
Sbjct: 555 RNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWV 614
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+R ++ + V+K PG SW+E+ +++H FSV D ++P IYA LE L
Sbjct: 615 DADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEEL 666
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 38/329 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I S N IT G+ G + AR FD MP R VSW ++ GY++ ++E+L++ + +
Sbjct: 328 ISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ 387
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
LN TF LS CA + +L GKQIH +K GY FVG+ LL Y C I+E
Sbjct: 388 DGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDE 447
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAK 193
A F+ + E + + W+ ML GY + A VF M K D + ++S A
Sbjct: 448 ANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLS--AC 505
Query: 194 SVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
S G ++ + F M + +P + +I R G E + L+ F+
Sbjct: 506 SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQ---DLIRNMPFQPG 562
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+ GAL+ GA R I+G +G + AE++F ++
Sbjct: 563 AASWGALL----------GASR----------------IHGNTELGE-KAAEMVF-KMEP 594
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
NS Y + YA G+ D+ ++ KM
Sbjct: 595 QNSGMYVLLSNLYAASGRWVDADKMRSKM 623
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 159/322 (49%), Gaps = 35/322 (10%)
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
D A+ V++ + + N++I+G + + A +F+++ E + S+N M+ GY
Sbjct: 66 DSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNC 125
Query: 330 QVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQ 375
++ D++RLF+ MP + ++S N+++S V M E+N ++WN +++ YV
Sbjct: 126 RLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVH 185
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV--KTPFESNV 433
N E+A L+ ++S + ++ C G +++ +L A + K P +
Sbjct: 186 NGRIEEACLLF---------ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAI 236
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
T ++ Y++ G ++ A+ F + +V WTA+++GY +G+ EA F+ M E+
Sbjct: 237 SWNT-MISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK 295
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
N ++ +++ V+ ++ ++F SM + + ++ G+ G + +A
Sbjct: 296 ----NEVSYNAMIAGYVQTKKMDIARELFESMP----CRNISSWNTMITGYGQIGDIAQA 347
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
+F MP + D V W A+++
Sbjct: 348 RKFFDMMP-QRDCVSWAAIIAG 368
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 66/147 (44%), Gaps = 39/147 (26%)
Query: 506 LSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
L + GL++ G + F M + Y V PT +HYTC++DLLGR L E
Sbjct: 771 LLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE------------ 818
Query: 565 DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRK 624
GALL A N E+GE+AAQ F K G +
Sbjct: 819 -----GALLGASRIHGNTELGEKAAQMFF---------------------KMGPQNSGIS 852
Query: 625 RLTHLEVKKDPGCSWIELNSRVHAFSV 651
++ + V+K PG SW E+ +++H FSV
Sbjct: 853 KMRDVGVQKVPGYSWFEVQNKIHTFSV 879
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 218/670 (32%), Positives = 355/670 (52%), Gaps = 56/670 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R+ +L++A +F M R VS+N+++ G + D +L L + M R +K + T ++
Sbjct: 308 RSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVAS 367
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS CA + +L G Q+H +K+G + LL Y+ C ++E A + F
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF------- 420
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ +++V+W ++ Y + +D + ++FR M+
Sbjct: 421 ------------------------LTTETENIVLWNVMLVAYGQ-LDNLSDSFEIFRQMQ 455
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G +PN++T+ S++R C LGA G+ +H +IK GF+ + + LI+ Y
Sbjct: 456 MEGM-IPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQL 514
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN----RLTEANSISYNSMI--- 322
A+R+ RL + + ++I G + +A +F R + ++I + S I
Sbjct: 515 ALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC 574
Query: 323 -------KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------ERNPVTWN 367
+G ++ Q + + + ++ISL I E ++N ++WN
Sbjct: 575 AGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWN 634
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
S++SG Q+ E+ALQ+++ M + + T+ A + L +++QGQ +H+ ++KT
Sbjct: 635 SLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKT 694
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
++S V SL+ +Y++ GSI+DA F+ +S NV +W A++ GYS HG G EA+ LF
Sbjct: 695 GYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLF 754
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
E M I+PN TFVGVLSAC GLV EG+ F SM K + +VP EHY CVVDLLGR
Sbjct: 755 EEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGR 814
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G L A E+IK+MPI DA++W LLSAC N+E+GERAA + L+ + + YV++
Sbjct: 815 AGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLI 874
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SNIYAV +W + RK + VKK+PG SWIE+ + VHAF D+ +P N IY +
Sbjct: 875 SNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYI 934
Query: 667 EHLTANLNSV 676
HL + +
Sbjct: 935 GHLNRRTSEI 944
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 150/599 (25%), Positives = 263/599 (43%), Gaps = 61/599 (10%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
M+L+ S++ E L++ + + R+G A +FD+ R+V SWN M+ +
Sbjct: 78 MRLHCRISKSGFDGEPLLIDS--LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFV 135
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG-KQIHCLVLKSGYECFE 119
+ L M + N TF+ +L C + + KQ+H G++
Sbjct: 136 AQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSP 195
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
V + L+ Y+ IE AK+VF+ C M K
Sbjct: 196 LVANLLIDLYSKNGYIESAKKVFN-------------------CICM------------K 224
Query: 180 DVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
D+V W +ISG ++ +G E+ A+ LF M S E P Y SV+ A ++ F G+
Sbjct: 225 DIVTWVAMISGLSQ--NGLEEEAILLFCDMHAS-EIFPTPYVLSSVLSASTKIQLFELGE 281
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+H L+IK GF + + L+ Y A R++ + + + NSLI+GL+ G
Sbjct: 282 QLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 341
Query: 299 RIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEK-----MPHRSII-- 347
+ A +F ++ + + I+ S++ A G + +L M I+
Sbjct: 342 FSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEG 401
Query: 348 SLNTMISVIPEME-----------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
SL + S ++E N V WN M+ Y Q + + +++ M+ +
Sbjct: 402 SLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP 461
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ T+ + C+ LG+L G+ +H H++KT F+ NVYV + L+DMY++ G + A
Sbjct: 462 NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRIL 521
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+ +V +WTA++ GY H + SEA+ LFE M + I + F +SAC +
Sbjct: 522 RRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALR 581
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+G +I + G L ++ L R G + EA + + + + + W +L+S
Sbjct: 582 QGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLVSG 639
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/538 (23%), Positives = 232/538 (43%), Gaps = 69/538 (12%)
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
+ + L++ M V+ N + +L C SL + ++HC + KSG++ + L+
Sbjct: 41 KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
Y + A +VFDE + W+ M+ +V F VF
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVA---QKSNFQVFC------------ 145
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG-AFCEGKVVHGLLI 245
LFR M G PN YTF V++AC AF K VH
Sbjct: 146 -----------------LFRRMLAEGIT-PNGYTFAGVLKACVGGDIAFNYVKQVHSRTF 187
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
GF+ + LI+ Y + A +V++ + + ++I+GL G E+A L
Sbjct: 188 YYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAIL 247
Query: 306 IFNRLTE----------ANSISYNSMIKGYAVYGQV----------------DDSKRLFE 339
+F + ++ +S ++ I+ + + Q+ + L+
Sbjct: 248 LFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYS 307
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+ R +IS + S + R+ V++NS+ISG VQ ++AL+L+ M++ +
Sbjct: 308 R--SRKLISAERIFSTMN--SRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T + L AC+ +G+L +G LH+H +K +++ + SL+D+YS+C + A F +
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTT 423
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+ N+ W ++ Y S++ +F M + ++PN T+ +L C G + G
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 520 KIFRSMKSYGVVPTLEHYTC--VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+I + G L Y C ++D+ + G L A ++ +P E D V W A+++
Sbjct: 484 QIHTHVIKTGF--QLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAG 538
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ R G++ A F+++ + +SWN+++ G ++ F+E+L + M R+ +
Sbjct: 603 NALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAE 662
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+N T+ + +S A L ++ G+QIH +VLK+GY+ V + L+ YA I +A R
Sbjct: 663 VNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWRE 722
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-K 200
F+++ E N + W+ M+ GY Q GC +
Sbjct: 723 FNDMSERNVISWNAMITGYSQ---------------------------------HGCGME 749
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
AL+LF M+ G MPN TF V+ AC+ +G EG
Sbjct: 750 ALRLFEEMKVCGI-MPNHVTFVGVLSACSHIGLVKEG 785
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 7/207 (3%)
Query: 375 QNNLH-----EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
Q LH K +QL M + + + L C GSL + LH + K+ F
Sbjct: 30 QTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGF 89
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ + SLVD Y R G + A F S+ +V +W +++ + + LF
Sbjct: 90 DGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRR 149
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSG 548
ML + I PN TF GVL ACV + +K S YG + ++DL ++G
Sbjct: 150 MLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNG 209
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSA 575
++ A++ + ++ D V W A++S
Sbjct: 210 YIESAKKVFNCICMK-DIVTWVAMISG 235
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I+ ++G + A F+ M R V+SWN M+ GYS+ E+L L M +
Sbjct: 703 SNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGI 762
Query: 81 KLNETTFSTILSVCAQLNSLIDGK-------QIHCLVLKS 113
N TF +LS C+ + + +G +IH LV KS
Sbjct: 763 MPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKS 802
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 209/652 (32%), Positives = 344/652 (52%), Gaps = 67/652 (10%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N I+ RN + ARNLFDQMP R + SWN ML GY + + ++ L M
Sbjct: 81 VSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEK 140
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+V +++++LS AQ + + ++ V + E +GLL Y + IEEA
Sbjct: 141 DV----VSWNSLLSGYAQNGYVDEARE----VFDNMPEKNSISWNGLLAAYVHNGRIEEA 192
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+F+ + + + W+ ++ G+V+ + DA +F KMP +D + W +ISGYA+ G
Sbjct: 193 CLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQG-GGL 251
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+A +LF +S R A G V +G+L
Sbjct: 252 SQARRLFD---------------ESPTRDVFTWTAMVSGYVQNGML-------------- 282
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
D A +D + + N++I G + +++ A +F + N S+
Sbjct: 283 -----------DEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSW 331
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+MI GY G + +++ F+ MP +R+ V+W ++I+GY Q+
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMP-----------------QRDCVSWAAIIAGYAQSGH 374
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+E+AL +++ +++ R+TF C+ + +L+ G+ +H VK + + +VG +
Sbjct: 375 YEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNA 434
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+ MY +CGSI++A +F I +V +W ++ GY+ HG G +A+ +FE M + P+
Sbjct: 435 LLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPD 494
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
T VGVLSAC GL++ G + F SM K YGV+PT +HYTC++DLLGR+G L EA++ I
Sbjct: 495 EITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLI 554
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
++MP + A WGALL A N E+GE+AA+ +F ++ + YV+LSN+YA G+W
Sbjct: 555 RNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWV 614
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+R ++ + V+K PG SW+E+ +++H FSV D ++P IYA LE L
Sbjct: 615 DADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEEL 666
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 38/329 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I S N IT G+ G + AR FD MP R VSW ++ GY++ ++E+L++ + +
Sbjct: 328 ISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ 387
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
LN TF LS CA + +L GKQIH +K GY FVG+ LL Y C I+E
Sbjct: 388 DGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDE 447
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAK 193
A F+ + E + + W+ ML GY + A VF M K D + ++S A
Sbjct: 448 ANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLS--AC 505
Query: 194 SVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
S G ++ + F M + +P + +I R G E + L+ F+
Sbjct: 506 SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQ---DLIRNMPFQPG 562
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+ GAL+ GA R I+G +G + AE++F ++
Sbjct: 563 AASWGALL----------GASR----------------IHGNTELGE-KAAEMVF-KMEP 594
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
NS Y + YA G+ D+ ++ KM
Sbjct: 595 QNSGMYVLLSNLYAASGRWVDADKMRSKM 623
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 159/322 (49%), Gaps = 35/322 (10%)
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
D A+ V++ + + N++I+G + + A +F+++ E + S+N M+ GY
Sbjct: 66 DSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNC 125
Query: 330 QVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQ 375
++ D++RLF+ MP + ++S N+++S V M E+N ++WN +++ YV
Sbjct: 126 RLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVH 185
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV--KTPFESNV 433
N E+A L+ ++S + ++ C G +++ +L A + K P +
Sbjct: 186 NGRIEEACLLF---------ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAI 236
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
T ++ Y++ G ++ A+ F + +V WTA+++GY +G+ EA F+ M E+
Sbjct: 237 SWNT-MISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK 295
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
N ++ +++ V+ ++ ++F SM + + ++ G+ G + +A
Sbjct: 296 ----NEVSYNAMIAGYVQTKKMDIARELFESMP----CRNISSWNTMITGYGQIGDIAQA 347
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
+F MP + D V W A+++
Sbjct: 348 RKFFDMMP-QRDCVSWAAIIAG 368
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 213/685 (31%), Positives = 349/685 (50%), Gaps = 90/685 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR LFD+ ++VVSWN M+ GY+ E+ +L + M + ++ ++ TF +IL
Sbjct: 93 GSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSIL 152
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S C+ +L G+++H V+++G VG+ L+ YA C +
Sbjct: 153 SACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVR--------------- 197
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
DA VF M +D V WT L YA+S +++LK + M +
Sbjct: 198 ----------------DARRVFDAMASRDEVSWTTLTGAYAES-GYAQESLKTYHAMLQE 240
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+ T+ +V+ AC L A +GK +H +++ D + AL + Y C A
Sbjct: 241 GVR-PSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKD 299
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISY--------- 318
A V++ L N + A N++I GL+ G++E+A +F+R+ + + ++Y
Sbjct: 300 AREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACAR 359
Query: 319 --------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
N++I Y+ G + D++++F++MP R ++S
Sbjct: 360 PGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVS---- 415
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
W +++ GY ++ + M + ++ + T+ + ACS
Sbjct: 416 -------------WTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPV 462
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+L+ G+ +HA +VK +++ V +L+ MY +CGS+ DA +S+ +V W L+
Sbjct: 463 ALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIG 522
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVV 531
G + +G G EA+ FE+M +++ PNA TFV V+SAC LV EG + F SM K YG+V
Sbjct: 523 GLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIV 582
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
PT +HY C+VD+L R+GHL EAE+ I MP + A +WGALL+AC N+E+GE+AA++
Sbjct: 583 PTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQ 642
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
L+ + YV LS IYA G W +RK + VKK+PG SWIE+ VH+F
Sbjct: 643 CLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVA 702
Query: 652 EDRNNPNCNVIYATLEHLTANLNSV 676
D+++P IY+ LE LT + S+
Sbjct: 703 GDQSHPRTEEIYSELEALTKQIKSL 727
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/539 (25%), Positives = 234/539 (43%), Gaps = 70/539 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ + G + AR +FD M R VSW T+ Y++ ESL M + V+
Sbjct: 184 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVR 243
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T+ +LS C L +L GKQIH +++S + V + L Y C +++A+ V
Sbjct: 244 PSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREV 303
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F+ L + + W+ M+ G V + +A +F +M K+ V
Sbjct: 304 FECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVA------------------- 344
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
P+ T+ +++ ACAR G GK +H +K G D G ALI
Sbjct: 345 --------------PDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALIN 390
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSIS 317
Y + A +V+DR+ + + +L+ G G++ ++ F ++ EAN I+
Sbjct: 391 MYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKIT 450
Query: 318 YNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISL-------NTMISVIPEME 360
Y ++K G ++ +V + + +++S+ I V M
Sbjct: 451 YMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMS 510
Query: 361 -RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
R+ VTWN++I G QN +ALQ + M+ + +TF + AC +++G+
Sbjct: 511 TRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRR 570
Query: 420 LHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGY 474
A + K P E + +VD+ +R G + +A+ ++ P+ A W AL+
Sbjct: 571 QFASMRKDYGIVPTEKHY---ACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAAC 627
Query: 475 SHHGLGSEAVLLFEIMLEQ--DIVP-NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
HG V + E EQ + P NA T+V + AG+ + K+ + MK GV
Sbjct: 628 RAHG----NVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGV 682
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
L +C L G+ +H H+++ + NVY+ +L+ +Y CGS+N+A+ F S+ +
Sbjct: 50 LLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKS 109
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V +W +++GY+H GLG EA LF +M ++ + P+ TFV +LSAC +N G ++
Sbjct: 110 VVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHV 169
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G+ ++ + + G + +A M D V W L A
Sbjct: 170 RVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMA-SRDEVSWTTLTGA 220
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 225/677 (33%), Positives = 351/677 (51%), Gaps = 87/677 (12%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N I+ RNG+ AR LFD+MP R +VSWN M+ GY + ++ L M
Sbjct: 91 VSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPER 150
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+V +++TILS AQ N +D +A
Sbjct: 151 DV----CSWNTILSGYAQ-NGCVD----------------------------------DA 171
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+RVFD + E N++ W+ +L YVQ + + +A +F +V W L+ G+ K
Sbjct: 172 RRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIV 231
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES---- 254
E A + F M+ + + +++++I A+ G E + + FDES
Sbjct: 232 E-ARQFFDSMK-----VRDVVSWNTIITGYAQNGEIDEARQL----------FDESPVHD 275
Query: 255 --IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
A++ Y + A ++DR+ + N+++ G + R+E A+ +F+ +
Sbjct: 276 VFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPC 335
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
N ++N+MI GYA G++ ++K LF+KMP +R+PV+W +MI+G
Sbjct: 336 RNVSTWNTMITGYAQCGKISEAKNLFDKMP-----------------KRDPVSWAAMIAG 378
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
Y Q+ +AL+L++ M + RS+FS C+ + +L+ G+ LH LVK +E+
Sbjct: 379 YSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 438
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
+VG +L+ MY +CGSI +A F ++ ++ +W ++ GYS HG G EA+ FE M
Sbjct: 439 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKR 498
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
+ + P+ AT V VLSAC GLV++G + F +M + YGV P +HY C+VDLLGR+G L
Sbjct: 499 EGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLE 558
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
EA +K+MP E DA +WG LL A N E+ E AA K+F ++ + YV+LSN+YA
Sbjct: 559 EAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 618
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
G+WG +R R+ VKK PG SWIE+ ++ H FSV D +P + I+A LE L
Sbjct: 619 SSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDL 678
Query: 672 NLN--------SVVLFD 680
+ SVVL D
Sbjct: 679 RMKKAGYVSKTSVVLHD 695
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 163/324 (50%), Gaps = 43/324 (13%)
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A+RV+ R+ + N++I+G + G E A ++F+ + E + +S+N MIKGY +
Sbjct: 78 ALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNL 137
Query: 332 DDSKRLFEKMPHRSIISLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQNN 377
++ LFE+MP R + S NT++S V M E+N V+WN+++S YVQN+
Sbjct: 138 GKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNS 197
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES----NV 433
E+A L+ +R ++++ C G +++ +++ A + F+S +V
Sbjct: 198 KLEEACVLFG---------SRENWALVSWNCLLGGFVKKKKIVEA---RQFFDSMKVRDV 245
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+++ Y++ G I++A+ F +V WTA+++GY + + EA LF+ M E+
Sbjct: 246 VSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER 305
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP--TLEHYTCVVDLLGRSGHLH 551
+ V A G + +G ++ + + + V+P + + ++ + G +
Sbjct: 306 NEVSWNAMLAGYV----------QGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKIS 355
Query: 552 EAEEFIKDMPIELDAVVWGALLSA 575
EA+ MP + D V W A+++
Sbjct: 356 EAKNLFDKMP-KRDPVSWAAMIAG 378
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 405 FHACSCLGSLQQGQLLHAHLVKTP--FESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
FH+ S Q Q+ + P +S++ + Y R G ++A F +
Sbjct: 32 FHSSK---SSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRW 88
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
+ ++ A+++GY +G A +LF+ M E+D+V ++ ++ VR + + ++F
Sbjct: 89 SSVSYNAMISGYLRNGEFELARMLFDEMPERDLV----SWNVMIKGYVRNRNLGKARELF 144
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
M V + ++ ++G + +A MP E + V W ALLSA
Sbjct: 145 ERMPERDVCS----WNTILSGYAQNGCVDDARRVFDRMP-EKNDVSWNALLSA 192
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 224/748 (29%), Positives = 353/748 (47%), Gaps = 93/748 (12%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N +T G A +LF MP VVSWN +L GY + F +S+ L M R
Sbjct: 71 VSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARR 130
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
V + TT + +L C L L G QIH + +K+G E GS L+ Y C +E+A
Sbjct: 131 GVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDA 190
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK-------------------- 178
R F + E N + W + G VQ + ++F++M +
Sbjct: 191 LRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAI 250
Query: 179 -------------------KDVVVWTKLISGYAK-----------------SVDGCE--- 199
D VV T ++ YAK +V C
Sbjct: 251 TCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMM 310
Query: 200 ----------KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
+AL+LF++M SG + + V ACA + + +G VH L IK GF
Sbjct: 311 VGLVRTGLGAEALQLFQFMTRSGIGF-DVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGF 369
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
+ D + A+++ Y C+A A V+ +E + N++I L ED N
Sbjct: 370 DVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNE 429
Query: 310 L----TEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
+ E + +Y S++K G V+G+ S + +++ + +
Sbjct: 430 MLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGM 489
Query: 356 IPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
I E ++ V+WNS+ISG+ N E+A + + M + + T++ +
Sbjct: 490 ITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDT 549
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ L +++ G+ +H ++K + Y+ ++LVDMY++CG++ D+ F + +W
Sbjct: 550 CANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSW 609
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
A++ GY+ HG G EA+ +FE M + ++VPN ATFV VL AC GL+++G + F M S
Sbjct: 610 NAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTS 669
Query: 528 -YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
Y + P LEH+ C+VD+LGRS EA +FI+ MP+E DAV+W LLS C ++EV E
Sbjct: 670 RYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAE 729
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
AA + LD S Y++LSN+YA GKW R+ + +KK+PGCSWIE+ S +
Sbjct: 730 TAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEM 789
Query: 647 HAFSVEDRNNPNCNVIYATLEHLTANLN 674
H F D+ +P +Y L +L +
Sbjct: 790 HGFLAGDKVHPRSREVYEMLNNLIVEMK 817
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 207/498 (41%), Gaps = 94/498 (18%)
Query: 85 TTFSTILSVCAQL--NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
TFS + +CA ++L G+ H +L SG+ FV + LL YA C A+ VF
Sbjct: 3 ATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVF 62
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
D + + + W+ ML Y A +F MP DVV W L+SGY C++ +
Sbjct: 63 DVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGY------CQRGM 116
Query: 203 -----KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
L M G P+ T +++AC L G +H + +K G E D G
Sbjct: 117 FRDSVGLSVEMARRGV-APDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGS 175
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL++ Y C + + A+R F+ + E NS+S
Sbjct: 176 ALVDMYGKCRSLEDALR-------------------------------FFHGMGERNSVS 204
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+ + I G Q LF +M
Sbjct: 205 WGAAIAGCVQNEQYTRGLELFVQM------------------------------------ 228
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
++L + ++ ++ +F +C+ + L + LHAH +K F ++ VGT
Sbjct: 229 ------------QRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGT 276
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
++VD+Y++ S+ DA+ +F S+ + V A A+M G GLG+EA+ LF+ M I
Sbjct: 277 AIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGF 336
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
+ + GV SAC +G+++ G + ++DL G+ L EA
Sbjct: 337 DVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVF 396
Query: 558 KDMPIELDAVVWGALLSA 575
++M + D+V W A+++A
Sbjct: 397 QEME-QRDSVSWNAIIAA 413
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 19/252 (7%)
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A + L C A S + + G+ A ++ + +S N +++ YA G
Sbjct: 1 ATATFSHLYQLCAGAGRSAL----ATGQAAHARMLVSGFMPTTFVS-NCLLQMYARCGGA 55
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNSMISGYVQNN 377
++ +F+ MPHR +S NTM++ + + V+WN+++SGY Q
Sbjct: 56 AHARGVFDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRG 115
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+ ++ L + M + + R+T +VL AC L L G +HA VKT E +V G+
Sbjct: 116 MFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGS 175
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+LVDMY +C S+ DA F + N +W A + G + + + LF M +
Sbjct: 176 ALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGV 235
Query: 498 NAATFVGVLSAC 509
+ + V +C
Sbjct: 236 SQPAYASVFRSC 247
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 219/691 (31%), Positives = 351/691 (50%), Gaps = 51/691 (7%)
Query: 8 SQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDE 67
S T +V N IT+ GRNG + A ++F++MP + VSW +L Y++ ++ ++
Sbjct: 45 SATRQKSSKFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINK 104
Query: 68 SL---------------SLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
+ ++++ HR N + + F + S Q NS+ I V
Sbjct: 105 AREVFNKIPDPNVASYNAMITAYHRRN--MVDEAFE-LFSSMPQRNSVSYATMITGFVHA 161
Query: 113 SGYECFE--------FVGSGLLF-FYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
++ E V S +L Y+ +E+A R+FD + E + + WS M+ G +
Sbjct: 162 GMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRV 221
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+ +A +F KMP ++VV WT +I GY K ++ + LF MR G + N T
Sbjct: 222 GKIVEARKLFDKMPDRNVVTWTLMIDGYMK-MNFLKDGFILFLNMRREGVEV-NATTLTV 279
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
++ AC + EG +HGL++ GF+ D + ++I Y C + D A + +D +
Sbjct: 280 LLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKD 339
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+ NSLI G + G +E A +F + + + +S+ ++I G+A G++D+ LF+ MP
Sbjct: 340 IVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMP- 398
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
E++ + W ++ISG V +E A ++ M + I T S
Sbjct: 399 ----------------EKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSC 442
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ A + + L QG +HA + K E+++ + SLV MYS+CG+++DA F I PN
Sbjct: 443 VLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPN 502
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V A+ ++ G + +GLG EA+ +F M + +VPN TF+GVLSACV GLV EG + F
Sbjct: 503 VVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFD 562
Query: 524 SMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
M+S Y + P +HY C+VDLL R+G EA + MP + VWGA+L A W + +
Sbjct: 563 LMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRL 622
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
+V E AAQ +F L+ + YVILSN++++ G K IR +KK PGCSWI L
Sbjct: 623 DVAELAAQNLFELEPNSATPYVILSNLHSISGDERKHELIRLMKKSRGLKKSPGCSWIIL 682
Query: 643 NSRVHAFSVEDRNNPN----CNVIYATLEHL 669
VH F ++ N +IYA E +
Sbjct: 683 KDEVHLFHAGHQSIKNIKEMTEIIYALAEEV 713
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 219/666 (32%), Positives = 349/666 (52%), Gaps = 90/666 (13%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
MP R VS+ T++ GY + + DE + L S +HR +LN F+TIL + +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
+H + K G+E FVG+ L+ Y C
Sbjct: 61 YSLHACIYKLGHESNAFVGTALI-------------------------------DAYAVC 89
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
++ A F + KD+V WT +++ YA++ D + +L+LF MR G N PN +TF
Sbjct: 90 GSVNSARQAFDAIACKDMVSWTGMVACYAEN-DRFQDSLQLFAEMRMVGFN-PNHFTFAG 147
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
V++AC L AF GK VHG ++K +E D +G L++ Y + +RV++ +
Sbjct: 148 VLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHD 207
Query: 284 L----------NASNSLINGLISMGRIEDAELIFNRLT---------------------- 311
+ SN + G++ A ++ N+ T
Sbjct: 208 VIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHC 267
Query: 312 -------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV 364
+ N N+++ YA G++D+S +LF ++P+ RN V
Sbjct: 268 HVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPN-----------------RNEV 310
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
TWN+MI GYVQ+ +KAL LY M + + + T+S + AC+ L +++ G +H+
Sbjct: 311 TWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLS 370
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
+KT ++ +V VG +L+DMY++CGSI +A+ F +S + +W A+++GYS HGL EA+
Sbjct: 371 LKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEAL 430
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDL 543
F++M E + VPN TFV +LSAC AGL++ G F+SM + YG+ P +EHYTC+V L
Sbjct: 431 KAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWL 490
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
LGRSGHL +A + I+++P+E + VW ALL AC ++++G +AQ++ +D + + +
Sbjct: 491 LGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATH 550
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
V+LSNIYA +W +RK + + VKK+PG SWIE VH FSV D ++P+ +I
Sbjct: 551 VLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMIS 610
Query: 664 ATLEHL 669
LE L
Sbjct: 611 GMLEWL 616
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/523 (25%), Positives = 236/523 (45%), Gaps = 58/523 (11%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + +AR FD + + +VSW M+ Y++ +F +SL L + M N TF+ +L
Sbjct: 90 GSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVL 149
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C L + GK +H VLK+ YE +VG GLL Y + + RVF+E+ + + +
Sbjct: 150 KACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVI 209
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS M+ Y Q N +A ++F +M + V
Sbjct: 210 PWSFMISRYAQSNQSREAVELFGQMRRAFV------------------------------ 239
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+PN++TF SV+++CA + GK VH ++K G + + + AL++ Y C D
Sbjct: 240 ---LPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDN 296
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAV 327
+M+++ L N N++I G + G + A ++ + E A+ ++Y+S+++ A
Sbjct: 297 SMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACAS 356
Query: 328 YGQVDDSKRL----FEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNSM 369
++ ++ + + + ++ N +I + + ER+ ++WN+M
Sbjct: 357 LAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAM 416
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-P 428
ISGY + L +AL+ + M++ + TF + ACS G L GQ +V+
Sbjct: 417 ISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYG 476
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLF 487
E + T +V + R G ++ A I PNV W AL+ H ++
Sbjct: 477 IEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSA 536
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
+ +L+ D + AT V + + R N + + MK+ GV
Sbjct: 537 QQILQID-PQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGV 578
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 36/207 (17%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
+CGR L + LF ++P R V+WNTM+ GY + D++LSL M V+ +E
Sbjct: 289 AKCGR---LDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEV 345
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T+S++L CA L ++ G QIH L LK+ Y+ VG+ L+ YA C I+ A+ VFD L
Sbjct: 346 TYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDML 405
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
E +E+ W+ M+ GY L+ + ALK F
Sbjct: 406 SERDEISWNAMISGYSMHGLVGE--------------------------------ALKAF 433
Query: 206 RWMRESGENMPNEYTFDSVIRACARLG 232
+ M+E+ E +PN+ TF S++ AC+ G
Sbjct: 434 QMMQET-ECVPNKLTFVSILSACSNAG 459
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N I + G + AR +FD + R +SWN M+ GYS E+L M
Sbjct: 379 VVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQE 438
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQ-IHCLVLKSGYE-CFEFVGSGLLFFYANCFEI 135
+ N+ TF +ILS C+ L G+ +V G E C E + +++ +
Sbjct: 439 TECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHY-TCMVWLLGRSGHL 497
Query: 136 EEAKRVFDELH-EDNELLWSLML 157
++A ++ +E+ E N +W +L
Sbjct: 498 DKAVKLIEEIPLEPNVKVWRALL 520
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 220/684 (32%), Positives = 347/684 (50%), Gaps = 96/684 (14%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-SN 79
N I C ++ ++ AR +FD+MP + +++W++M+ YS+ +E+L + + R S
Sbjct: 87 ANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSG 146
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
NE ++++ C QL + G Q+H V++SG++ +VG+ L+ FY+ IEEA+
Sbjct: 147 EHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEAR 206
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VFD+L E K V WT +I+GY K C
Sbjct: 207 LVFDQLSE-------------------------------KTAVTWTTIIAGYTK----CG 231
Query: 200 KA---LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
++ L+LF MRE+ +P+ Y SV+ AC+ L GK +H +++ G E D S+
Sbjct: 232 RSAVSLELFAQMRETNV-VPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVV 290
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF---NRLT-- 311
LI+FY C +++D++ + + ++I+G + +A +F NRL
Sbjct: 291 NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWK 350
Query: 312 ----------------------------------EANSISYNSMIKGYAVYGQVDDSKRL 337
E++ N +I YA + D+K++
Sbjct: 351 PDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKV 410
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
F+ M E+N +++N+MI GY +AL+L+ MR
Sbjct: 411 FDVMA-----------------EQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPN 453
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
TF+ L A S L SL+ GQ H LVK + +V +LVDMY++CGSI +A+ F+
Sbjct: 454 EFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFN 513
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
S +V W ++++ ++ HG EA+ +F M+++ I PN TFV VLSAC AG V +
Sbjct: 514 SSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVED 573
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
G+ F SM +G+ P EHY CVV LLGRSG L EA+EFI+ MPIE A+VW +LLSAC
Sbjct: 574 GLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACR 633
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
N+E+G+ AA+ D K +Y++LSNI+A G W +R R+ EV K+PG
Sbjct: 634 IAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGR 693
Query: 638 SWIELNSRVHAFSVEDRNNPNCNV 661
SWIE+N++V+ F D + ++
Sbjct: 694 SWIEVNNKVNVFIARDTTHREADI 717
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/518 (24%), Positives = 238/518 (45%), Gaps = 55/518 (10%)
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
N++ F+ +L + N +I K IH ++ SG + F+ + L+ + ++ A
Sbjct: 44 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 103
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ VFD KMP K+++ W+ ++S Y++
Sbjct: 104 RVVFD-------------------------------KMPHKNLITWSSMVSMYSQQGYSE 132
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
E + R+SGE+ PNE+ SVIRAC +LG +G +HG +++ GF+ D +G +
Sbjct: 133 EALMVFVDLQRKSGEH-PNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 191
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS- 317
LI+FY + A V+D+L ++I G GR + +F ++ E N +
Sbjct: 192 LIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPD 251
Query: 318 ---YNSMIKGYAVYGQVDDSKRLFEKMPHR----SIISLNTMISVIPEMER--------- 361
+S++ ++ ++ K++ + R + +N +I + R
Sbjct: 252 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 311
Query: 362 -----NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
N ++W +MISGY+QN+ +A++L+ M +L + + +C +L+Q
Sbjct: 312 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQ 371
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +HA+ +K ES+ +V L+DMY++ + DA+ F ++ NV ++ A++ GYS
Sbjct: 372 GRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSS 431
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
SEA+ LF M + PN TF +++A + G + + G+
Sbjct: 432 QEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFV 491
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+VD+ + G + EA + + I D V W +++S
Sbjct: 492 TNALVDMYAKCGSIEEARKMF-NSSIWRDVVCWNSMIS 528
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 219/691 (31%), Positives = 351/691 (50%), Gaps = 51/691 (7%)
Query: 8 SQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDE 67
S T +V N IT+ GRNG + A ++F++MP + VSW +L Y++ ++ ++
Sbjct: 37 SATRQKSSKFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINK 96
Query: 68 SL---------------SLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
+ ++++ HR N + + F + S Q NS+ I V
Sbjct: 97 AREVFNKIPDPNVASYNAMITAYHRRN--MVDEAFE-LFSSMPQRNSVSYATMITGFVHA 153
Query: 113 SGYECFE--------FVGSGLLF-FYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
++ E V S +L Y+ +E+A R+FD + E + + WS M+ G +
Sbjct: 154 GMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRV 213
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+ +A +F KMP ++VV WT +I GY K ++ + LF MR G + N T
Sbjct: 214 GKIVEARKLFDKMPDRNVVTWTLMIDGYMK-MNFLKDGFILFLNMRREGVEV-NATTLTV 271
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
++ AC + EG +HGL++ GF+ D + ++I Y C + D A + +D +
Sbjct: 272 LLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKD 331
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+ NSLI G + G +E A +F + + + +S+ ++I G+A G++D+ LF+ MP
Sbjct: 332 IVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMP- 390
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
E++ + W ++ISG V +E A ++ M + I T S
Sbjct: 391 ----------------EKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSC 434
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ A + + L QG +HA + K E+++ + SLV MYS+CG+++DA F I PN
Sbjct: 435 VLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPN 494
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V A+ ++ G + +GLG EA+ +F M + +VPN TF+GVLSACV GLV EG + F
Sbjct: 495 VVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFD 554
Query: 524 SMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
M+S Y + P +HY C+VDLL R+G EA + MP + VWGA+L A W + +
Sbjct: 555 LMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRL 614
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
+V E AAQ +F L+ + YVILSN++++ G K IR +KK PGCSWI L
Sbjct: 615 DVAELAAQNLFELEPNSATPYVILSNLHSISGDERKHELIRLMKKSRGLKKSPGCSWIIL 674
Query: 643 NSRVHAFSVEDRNNPN----CNVIYATLEHL 669
VH F ++ N +IYA E +
Sbjct: 675 KDEVHLFHAGHQSIKNIKEMTEIIYALAEEV 705
>gi|297744236|emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 228/652 (34%), Positives = 344/652 (52%), Gaps = 47/652 (7%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIR----TVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ I EC +L AR++ D+MP R VV W ++L +SK DE+ +L M
Sbjct: 45 DSQILECLSQQRLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPE 104
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
NV T++ +LS Q L D C + E + LL AN I E
Sbjct: 105 RNV----VTYNAMLSGYVQCGRLSDA----CRFFEEMPERNVVSWTSLLCGLANAGRIGE 156
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ +F+ + E N + W+ MLVG ++ + +A VF +MP K V W +I+GYA+
Sbjct: 157 ARELFNVMPERNVVSWNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEH-SR 215
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK-VVHGLLIKCGFEFDESIG 256
E+A LF M + N T+ S+I R G EG + + + + IG
Sbjct: 216 MEEARVLFDGMGDR-----NVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIG 270
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
G A++G + + + NS+ING I +G++E A+ +F+ + + I
Sbjct: 271 GF---------AWNGFYKEALNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDKI 321
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S+ SMI GY GQ+ + LF MP +R+ V W M+SG+VQN
Sbjct: 322 SWTSMINGYFNVGQIAKACYLFNNMP-----------------DRDAVAWTVMVSGHVQN 364
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
L +A L+ MR + STFS+L A + L QG+ H L+KT FE ++ +
Sbjct: 365 ELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDLILQ 424
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
SL+ MY++CG I DA + FS + S ++ +W +++ G+SHHGL SEA+ +FE ML
Sbjct: 425 NSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSHHGLTSEALKVFEAMLTSGTH 484
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
PN+ TF+G+LSAC AGL+N+G ++F +M + + P LEHY C+V+LLGR+G + EAEE
Sbjct: 485 PNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEHYVCMVNLLGRAGKVEEAEE 544
Query: 556 FIKDMPIELDAVVWGALLSACWFWM-NMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
FI +P E D +WGALL C F M N V RAA+++ LD A+V+L NI+A +G
Sbjct: 545 FISKLPFEPDLTIWGALLGVCGFGMINTGVARRAAKRLLELDPLNAPAHVVLCNIHASIG 604
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
+ ++ +RK + V+K PGCSWI L + F DR +P + + + L
Sbjct: 605 QRAEEGQLRKEMGLKGVRKVPGCSWILLKGEPYVFLSGDRIHPQADEMLSLL 656
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 204/485 (42%), Gaps = 116/485 (23%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS N + R+GQL AR +F++MP+++ VSWN M+ GY++ ++ +E+ L
Sbjct: 166 ERNVVSWNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDG 225
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK-------------SGYECFEFV 121
M NV T+++++S + ++ +G +CL K G+ F
Sbjct: 226 MGDRNV----VTWTSMISGYCRAGNVQEG---YCLFQKMPERNVVSWTAMIGGFAWNGFY 278
Query: 122 GSGL-------------LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD 168
L + Y ++E+A+ +FD + +++ W+ M+ GY ++
Sbjct: 279 KEALNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAK 338
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A +F MP +D V WT ++SG+ ++ + +A LF MR G + P TF ++ A
Sbjct: 339 ACYLFNNMPDRDAVAWTVMVSGHVQN-ELFAEATYLFSEMRVKGVS-PLNSTFSILLGAA 396
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
+ +G+ H LL+K FEFD + +LI Y C
Sbjct: 397 GAMAYLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKC---------------------- 434
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
G I DA IF+++ + IS+NSMI G++ +G ++ ++FE M
Sbjct: 435 ---------GEIGDAYSIFSKMISRDLISWNSMIMGFSHHGLTSEALKVFEAM------- 478
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
+ SG N++ TF + AC
Sbjct: 479 --------------------LTSGTHPNSV---------------------TFLGILSAC 497
Query: 409 SCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAA 466
S G L QG +L A + + +V++ R G + +A+ S + P++
Sbjct: 498 SHAGLLNQGWELFDAMSDVFAIQPQLEHYVCMVNLLGRAGKVEEAEEFISKLPFEPDLTI 557
Query: 467 WTALM 471
W AL+
Sbjct: 558 WGALL 562
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 208/641 (32%), Positives = 338/641 (52%), Gaps = 62/641 (9%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+ +L +C + ++ K +H ++K+ F+ + L+ YA I A +VFD++
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE---KALK 203
N W+ +L Y + +S+ +F MP++D V W LISGYA GC +++K
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYA----GCGLIYQSVK 127
Query: 204 LFRWM-RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
+ M + G N TF +++ ++ G G+ +HG ++K GF +G L++
Sbjct: 128 AYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDM 187
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI 322
Y A +V+D L + N+LI GL+ GR+ED++ +F + E +SIS+ SMI
Sbjct: 188 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247
Query: 323 KGYAVYGQVDDSKRLFEKMP------------------------------HRSII----- 347
G+ G D+ +F +M H II
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK 307
Query: 348 -----------------SLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTM 389
++ + +V +M +N V+W +M+ GY QN E+A++ + M
Sbjct: 308 DNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDM 367
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+K I+ T + +C+ L SL++G HA + + S + V +LV +Y +CGSI
Sbjct: 368 QKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSI 427
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
D+ F+ IS + WTAL++GY+ G +E + LFE ML + P+ TF+GVLSAC
Sbjct: 428 EDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSAC 487
Query: 510 VRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
RAGLV +G +IF SM +G+VP +HYTC++DL R+G + EA FI MP DA+
Sbjct: 488 SRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAIS 547
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W LLS+C F+ NM++G+ AA+ + LD ++YV+LS++YA GKW + +RK +
Sbjct: 548 WATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRD 607
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
++K+PGCSWI+ ++VH FS +D++NP + IY+ LE L
Sbjct: 608 KGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKL 648
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 135/543 (24%), Positives = 270/543 (49%), Gaps = 37/543 (6%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N ++ + G++ LFD MP R VSWN+++ GY+ +S+ + M +
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134
Query: 78 SN--VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
++ LN TFST+L + ++ + G+QIH V+K G+ + FVGS L+ Y+ I
Sbjct: 135 NDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMI 194
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A++VFDEL E N ++++ +++G ++C + D+ +F +M ++D + WT +I+G+ +
Sbjct: 195 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQ-- 252
Query: 196 DGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+G ++ A+ +FR M+ M ++YTF SV+ AC + A EGK VH +I+ ++ +
Sbjct: 253 NGLDRDAIDIFREMKLENLQM-DQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT--- 311
+ AL++ YC C+ A V+ ++ + + +++ G G E+A F+ +
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371
Query: 312 -EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME---------- 360
E + + S+I A +++ + + +IS T+ + + +
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSH 431
Query: 361 --------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
++ VTW +++SGY Q + + L+ +M + + TF + ACS G
Sbjct: 432 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAG 491
Query: 413 SLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAW 467
+++G + ++ P + + T ++D++SR G I +A+ + + SP+ +W
Sbjct: 492 LVEKGNQIFESMINEHGIVPIQDHY---TCMIDLFSRAGRIEEARNFINKMPFSPDAISW 548
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
L++ +G E ++E D N A++V + S G E ++ + M+
Sbjct: 549 ATLLSSCRFYGNMDIGKWAAEFLMELD-PHNTASYVLLSSVYAAKGKWEEVARLRKDMRD 607
Query: 528 YGV 530
G+
Sbjct: 608 KGL 610
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 214/671 (31%), Positives = 359/671 (53%), Gaps = 56/671 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T R G + A +F+ M R VS+N+++ G S+ D++L L M +K
Sbjct: 310 NALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLK 369
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T +++LS C+ + +L+ GKQ H +K+G
Sbjct: 370 PDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMS------------------------- 404
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
+ +L +L YV+C+ + A + F+ ++VV+W ++ Y +D ++
Sbjct: 405 ------SDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGL-LDNLNES 457
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
K+F M+ G PN++T+ S++R C+ L A G+ +H ++K GF+F+ + LI+
Sbjct: 458 FKIFTQMQMEGIE-PNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLID 516
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSIS 317
Y D A++++ RL+ + + ++I G + +A +F + + +++I
Sbjct: 517 MYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIG 576
Query: 318 YNSMI----------KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE--------M 359
+ S I +G ++ Q S + +++SL + +
Sbjct: 577 FASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIF 636
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
++ ++WNS+ISG+ Q+ E+AL L+ M K + TF A + + +++ G+
Sbjct: 637 SKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQ 696
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+HA ++KT +S V L+ +Y++CG+I+DA+ F + N +W A++ GYS HG
Sbjct: 697 IHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGH 756
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYT 538
G +A+ LFE M + ++PN TFVGVLSAC GLV+EG+K F+SM+ +G+VP EHY
Sbjct: 757 GFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYA 816
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
CVVDLLGRSG L A F+++MPI+ DA+V LLSAC N+++GE AA + L+ K
Sbjct: 817 CVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPK 876
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
+ YV+LSN+YAV GKWG + R+ + VKK+PG SWIE+N+ VHAF D+ +PN
Sbjct: 877 DSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPN 936
Query: 659 CNVIYATLEHL 669
+ IY L L
Sbjct: 937 VDKIYEYLRDL 947
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 147/569 (25%), Positives = 260/569 (45%), Gaps = 58/569 (10%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+NG L +A+ +FD + R VSW ML G S+ +E++ L MH S V FS+
Sbjct: 217 KNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSS 276
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C ++ G+Q+H LVLK G+ +V + L+ Y+ A++VF+ + + +
Sbjct: 277 VLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRD 336
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
E+ ++ ++ G Q A ++F KM C LK
Sbjct: 337 EVSYNSLISGLSQQGYSDKALELFKKM---------------------CLDCLK------ 369
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P+ T S++ AC+ +GA GK H IK G D + GAL++ Y C
Sbjct: 370 ------PDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDI 423
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGY 325
A + E + N ++ + + ++ IF ++ E N +Y S+++
Sbjct: 424 KTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTC 483
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMI-SVIPEM------------------ERNPVTW 366
+ VD +++ ++ ++ N + SV+ +M E++ V+W
Sbjct: 484 SSLRAVDLGEQIHTQVL-KTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSW 542
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+MI+GY Q+ +AL L+ M+ I F+ AC+ + +L QGQ +HA
Sbjct: 543 TAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACV 602
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ + ++ VG +LV +Y+RCG + DA +F I S + +W +L++G++ G EA+ L
Sbjct: 603 SGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSL 662
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
F M + N+ TF +SA V G +I + G E ++ L +
Sbjct: 663 FSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAK 722
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G++ +AE +MP E + + W A+L+
Sbjct: 723 CGNIDDAERQFFEMP-EKNEISWNAMLTG 750
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 151/574 (26%), Positives = 252/574 (43%), Gaps = 71/574 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A +FD+MP+R + WN +L + L L M + VK +E T++ +L
Sbjct: 117 GDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVL 176
Query: 92 SVCAQLNSLIDG-KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
C + ++IH + GYE FV + L+ Y + AK+VFD L + +
Sbjct: 177 RGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDS 236
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMR 209
+ W ML G Q GC E+A+ LF M
Sbjct: 237 VSWVAMLSGLSQ---------------------------------SGCEEEAVLLFCQMH 263
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
SG P Y F SV+ AC ++ + G+ +HGL++K GF + + AL+ Y F
Sbjct: 264 TSGV-YPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNF 322
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGY 325
A +V++ + + NSLI+GL G + A +F ++ + + ++ S++
Sbjct: 323 IPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSAC 382
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE-----------------------MERN 362
+ G + L K H I +I E N
Sbjct: 383 SSVGAL-----LVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETEN 437
Query: 363 PVTWNSMISGY-VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
V WN M+ Y + +NL+E + +++ M+ I+ + T+ + CS L ++ G+ +H
Sbjct: 438 VVLWNVMLVAYGLLDNLNE-SFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIH 496
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
++KT F+ NVYV + L+DMY++ G ++ A F + +V +WTA++ GY+ H +
Sbjct: 497 TQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFA 556
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
EA+ LF+ M +Q I + F +SAC +N+G +I G L +V
Sbjct: 557 EALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALV 616
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
L R G + +A F D D + W +L+S
Sbjct: 617 SLYARCGKVRDA-YFAFDKIFSKDNISWNSLISG 649
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/532 (23%), Positives = 231/532 (43%), Gaps = 61/532 (11%)
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
++ + M V+ N T+ +L C DG ++H +LK G+
Sbjct: 53 INFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGF------------- 99
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
C E+ +R+ D Y+ + A VF +MP + + W K++
Sbjct: 100 ---CAEVVLCERLMDL---------------YIAFGDLDGAVTVFDEMPVRPLSCWNKVL 141
Query: 189 SGY-AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC--ARLGAFCEGKVVHGLLI 245
+ A + G + L LFR M + + P+E T+ V+R C + C K +H I
Sbjct: 142 HRFVAGKMAG--RVLGLFRRMLQE-KVKPDERTYAGVLRGCGGGDVPFHCVEK-IHARTI 197
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
G+E + LI+ Y + A +V+D L+ + ++++GL G E+A L
Sbjct: 198 THGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVL 257
Query: 306 IFNRLTEANSIS----YNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNT 351
+F ++ + ++S++ G ++G V E ++++L +
Sbjct: 258 LFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYS 317
Query: 352 MI-SVIPE-------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
+ + IP ++R+ V++NS+ISG Q +KAL+L+ M + T +
Sbjct: 318 RLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVAS 377
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
L ACS +G+L G+ H++ +K S++ + +L+D+Y +C I A F S + N
Sbjct: 378 LLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETEN 437
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V W ++ Y +E+ +F M + I PN T+ +L C V+ G +I
Sbjct: 438 VVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHT 497
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G + + ++D+ + G L A + + + E D V W A+++
Sbjct: 498 QVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAG 548
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 183/413 (44%), Gaps = 34/413 (8%)
Query: 191 YAKSVD-GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
YA S D G + M E G N T+ ++ C G F +G +HG ++K GF
Sbjct: 41 YAYSNDEGEANGINFLHLMEERGVR-ANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGF 99
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL-IFN 308
+ + L++ Y DGA+ V+D + L+ N +++ ++ G++ L +F
Sbjct: 100 CAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVA-GKMAGRVLGLFR 158
Query: 309 RL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS---------------- 348
R+ + + +Y +++G G D EK+ R+I
Sbjct: 159 RMLQEKVKPDERTYAGVLRGC---GGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLY 215
Query: 349 -----LNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
LN+ V ++ R+ V+W +M+SG Q+ E+A+ L+ M + T FS
Sbjct: 216 FKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFS 275
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ AC+ + + G+ LH ++K F YV +LV +YSR G+ A+ F+++
Sbjct: 276 SVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQR 335
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
+ ++ +L++G S G +A+ LF+ M + P+ T +LSAC G + G +
Sbjct: 336 DEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFH 395
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G+ + ++DL + + A EF E + V+W +L A
Sbjct: 396 SYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETE-NVVLWNVMLVA 447
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 23/186 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N IT + G + A F +MP + +SWN ML GYS+ ++LSL M + V
Sbjct: 713 SNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGV 772
Query: 81 KLNETTFSTILSVCAQLNSLIDG-------KQIHCLVLK-SGYEC-FEFVG-SGLLFFYA 130
N TF +LS C+ + + +G +++H LV K Y C + +G SGLL
Sbjct: 773 LPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLL---- 828
Query: 131 NCFEIEEAKRVFDEL--HEDNELLWSLMLVGYVQCNLMSDAFDV--FIKMPKKDVVVWTK 186
A+R +E+ D + +L+ V N+ F +++ KD +
Sbjct: 829 -----SRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVL 883
Query: 187 LISGYA 192
L + YA
Sbjct: 884 LSNMYA 889
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 221/702 (31%), Positives = 369/702 (52%), Gaps = 67/702 (9%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E V+ N I+ +NG++ ARNLFD+MP R +VSWNTM+ GY KFDE+ L
Sbjct: 3 EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVI 62
Query: 75 MHRSNVKLNETTFS-TILSVCAQLNSLIDGKQ-----IHCLVLKSGYECFEFVGSGLLFF 128
M R ++ FS T++ C N ++ + + C + G C+ + SG
Sbjct: 63 MPRRDL------FSWTLMITCYTRNGEVEKARELFDSLPC-SYRKGVACWNAMISG---- 111
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
Y + EAKR+FDE+ N + W+ ML GY Q M + F +M ++DVV W ++
Sbjct: 112 YVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMV 171
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK---------- 238
G+ + V + A K F+ ++ PN ++ +++ AR G E +
Sbjct: 172 DGFIQ-VGDLDSAWKFFQETQK-----PNVVSWVTMLSGFARNGNILESRRLFDQMPSRN 225
Query: 239 ------VVHGLLIKCGF-----------EFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
++ + +C E D +I Y D A + + +
Sbjct: 226 IVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPY 285
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ A ++I+G I ++++A F+ + + + +N+MI GYA +G+++++ L ++M
Sbjct: 286 RNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRM 345
Query: 342 PHRSIISLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYM 387
++ +++ NTMIS + EM ER+ V+WNS+I+G++ N + AL+ +
Sbjct: 346 VNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFA 405
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
M + +F+ +C+ + +LQ G LH +VK + + + V +L+ MY++CG
Sbjct: 406 LMGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCG 465
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
I +A F+ I +V +W +L+ GY+ +G G EA+ LFE M + + P+ TF+G+LS
Sbjct: 466 RILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILS 525
Query: 508 ACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
AC AG+V+ G+K+F+ M K Y + P EHY C+VDLLGR G L EA E ++ M ++ A
Sbjct: 526 ACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATA 585
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
VWGALL AC N+E+G AA K+ + S YV+LSNI+A +W + ++R +
Sbjct: 586 GVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVRMLM 645
Query: 627 THLEVKKDPGCSWIELNSRVHAFSVED--RNNPNCNVIYATL 666
K+PGCSW+E+ ++VH F +D R+ P+ V A+L
Sbjct: 646 NASSTVKEPGCSWVEVRNQVHGFLSDDSTRSRPDIGVTLASL 687
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 197/436 (45%), Gaps = 84/436 (19%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLV 72
TQ+ +VS ++ RNG ++ +R LFDQMP R +VSWN M+ Y + + DE+ L
Sbjct: 190 TQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEASRLF 249
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M + +++T+++ ++ L + ++ L+ + Y + ++ Y C
Sbjct: 250 EEMPER----DSVSWTTMINGYVRIGKLDEARE---LLNEMPYRNIG-AQTAMISGYIQC 301
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
+++EA+R FDE+ + + W+ M+ GY +++A + +M KD+V W +IS YA
Sbjct: 302 NKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYA 361
Query: 193 KSVDGCEKALKLFRWMRE---------------SGENM---------------PNEYTFD 222
+ V ++A+K+F M E +G+N+ P++ +F
Sbjct: 362 Q-VGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFA 420
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
+ +CA + A G +H +++K G+ + ALI Y C
Sbjct: 421 CGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKC---------------- 464
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
GRI +A L+FN + A+ IS+NS+I GYA+ G ++ +LFE+M
Sbjct: 465 ---------------GRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMA 509
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL-AIDRTRSTF 401
M + VT+ ++S + + L+L+ M K+ AI+ +
Sbjct: 510 SEG-------------MAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHY 556
Query: 402 SVLFHACSCLGSLQQG 417
+ + +G L +
Sbjct: 557 ACMVDLLGRVGRLDEA 572
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 135/293 (46%), Gaps = 54/293 (18%)
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ E N+++YNSMI YA G+++ ++ LF+KMP R+++S WN+M
Sbjct: 1 MAEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVS-----------------WNTM 43
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+SGY+ N ++A +L++ M + R +++++ + G +++ + L L +
Sbjct: 44 VSGYLHNGKFDEAYKLFVIMPR----RDLFSWTLMITCYTRNGEVEKARELFDSL-PCSY 98
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
V +++ Y + G +N+A+ F + N+ +W +++ GY+ + + F
Sbjct: 99 RKGVACWNAMISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNE 158
Query: 490 MLEQDIV---------------------------PNAATFVGVLSACVRAGLVNEGMKIF 522
M E+D+V PN ++V +LS R G + E ++F
Sbjct: 159 MDERDVVSWNLMVDGFIQVGDLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLF 218
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
M S +V + ++ + + EA ++MP E D+V W +++
Sbjct: 219 DQMPSRNIVS----WNAMISAYVQRCEIDEASRLFEEMP-ERDSVSWTTMING 266
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 247/778 (31%), Positives = 375/778 (48%), Gaps = 124/778 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS N I + +V A F+ MP R VVSWN+ML G+ + + ES+ + M R
Sbjct: 115 VVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGR 174
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S V+ + +FS IL VC+ L + G QIH + L+ GY+ GS LL YA C ++E
Sbjct: 175 SGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDE 234
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK------------------- 178
+ VF + + N + WS ++ G VQ N + +F +M K
Sbjct: 235 SFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCAT 294
Query: 179 --------------------KDVVVWTKLISGYAKSVDGCEKALKLFRWMR----ESGEN 214
KD +V T + YAK + + A +LF +S
Sbjct: 295 LPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAK-CNNMQDAQRLFDMSENLNLQSYNA 353
Query: 215 MPNEYT---------------------FDSV-----IRACARLGAFCEGKVVHGLLIKCG 248
M Y+ FD + +RACA + EG +HGL K
Sbjct: 354 MITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSN 413
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI-------------NGLI 295
F + + A I+ Y CEA D A RV+D + + N++I N L+
Sbjct: 414 FSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILV 473
Query: 296 SMGR--IEDAELIFNRLTEA-----------------------NSISYNSMIKGYAVYGQ 330
SM R +E E F + +A N +S++ Y+ G
Sbjct: 474 SMLRSGMEPDEYTFGSVLKACAGDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGM 533
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNP------------VTWNSMISGYVQNNL 378
+D+++++ K+ I NT S PE P V+WN++ISGYV
Sbjct: 534 IDEAEKIHNKI-FIGIGDSNT-YSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQ 591
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
E A + + M ++ I + T+S + C+ L S+ G+ +HAH++K + +VY+ ++
Sbjct: 592 SEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICST 651
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
LVDMYS+CG+++D++ F + W A++ GY+HHG+G EA+ LFE M+ +I+PN
Sbjct: 652 LVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPN 711
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
ATFV +L AC GLV G+ F MK YG+ P LEHY+ +VD+LG+SG + +A E I
Sbjct: 712 HATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELI 771
Query: 558 KDMPIELDAVVWGALLSACWF-WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
++MP E D V+W LLSAC N+E E AA + LD + S Y++LSNIYA G W
Sbjct: 772 QEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMW 831
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
K ++R + ++KK+PGCSW+E+ H F V D+ +P IY L + +N
Sbjct: 832 DKASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIYNGLALIYNEMN 889
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 235/492 (47%), Gaps = 27/492 (5%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
FS + CA+ + GKQ H ++ SG+ FV + LL Y NC + A ++FD +
Sbjct: 52 FSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMP 111
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ + W+ M+ GY N M A F MP +DVV W ++SG+ ++ + E ++K+F
Sbjct: 112 LRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLE-SVKVFI 170
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M SG N+ +F +++ C+ L + G +HG+ ++ G++ D G AL++ Y C
Sbjct: 171 EMGRSGVEFDNK-SFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKC 229
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-----ANSISYNSM 321
+ D + V+ + + +++I G + ++ +F + + + SI Y S+
Sbjct: 230 KRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSI-YASV 288
Query: 322 IK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER--------NP 363
+K G ++ S + + + + + + + + + +R N
Sbjct: 289 LKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNL 348
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
++N+MI+GY Q + +AL L+ + K ++ + S AC+ + L +G LH
Sbjct: 349 QSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGL 408
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
K+ F N+ V + +DMY +C ++++A F + + +W A++ + + S+
Sbjct: 409 ATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKT 468
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
+ + ML + P+ TF VL AC L N GM+I ++ G+ + +VD+
Sbjct: 469 LNILVSMLRSGMEPDEYTFGSVLKACAGDSL-NHGMEIHTTIVKLGMASNPYIGSSLVDM 527
Query: 544 LGRSGHLHEAEE 555
+ G + EAE+
Sbjct: 528 YSKCGMIDEAEK 539
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
+ FS +F C+ + + G+ HAH++ + F V+V L+ +Y CG++ A F
Sbjct: 50 ANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDG 109
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ +V +W A++ GY+ A L FE+M +D+V ++ +LS ++ G E
Sbjct: 110 MPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVV----SWNSMLSGFLQTGENLES 165
Query: 519 MKIFRSMKSYGV 530
+K+F M GV
Sbjct: 166 VKVFIEMGRSGV 177
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 228/713 (31%), Positives = 360/713 (50%), Gaps = 60/713 (8%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+E +++ N + + G L A LFD+MP R V SWNT++ GY + +F + L
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 74 TMHRSNVKL-NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
+MHRS L N TF ++ C L Q+ L K + V + L+ + C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
++ A R+F ++ + ML GY + + A + F M ++DVV W +I+ +
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+S +AL L M G + + T+ S + ACARL + GK +H +I+ + D
Sbjct: 247 QS-GRVREALGLVVEMHRKGVRL-DSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID 304
Query: 253 ESIGGALIEFYCGCEAFDGAMRVY----DR------------LENPCLNASNSLING--- 293
+ ALIE Y C +F A RV+ DR L+ C + S L N
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364
Query: 294 -LISMGRIEDAELI---FNRL-----------------TEANSISYNSMIKGYAVYGQVD 332
L+++ + A LI FNR+ A +S NS+I YA G +
Sbjct: 365 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVS-NSLISLYAKCGDLQ 423
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNSMISGYVQNNL 378
+++ +F M R I+S +MI+ ++ RN +TWN+M+ Y+Q+
Sbjct: 424 NAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGA 483
Query: 379 HEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
E L++Y M + + T+ LF C+ +G+ + G + H VK NV V
Sbjct: 484 EEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVAN 543
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+ + MYS+CG I++AQ F ++ +V +W A++ GYS HG+G +A F+ ML + P
Sbjct: 544 AAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKP 603
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
+ ++V VLS C +GLV EG F M + +G+ P LEH++C+VDLLGR+GHL EA++
Sbjct: 604 DYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDL 663
Query: 557 IKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
I MP++ A VWGALLSAC N E+ E AA+ +F LD +Y++L+ IY+ GK
Sbjct: 664 IDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKS 723
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+RK + +KK+PG SW+E+ ++VH F +D ++P I L+ L
Sbjct: 724 DDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDEL 776
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/615 (23%), Positives = 271/615 (44%), Gaps = 108/615 (17%)
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD-ELHEDN 149
L C +L + +H ++ G F+ + LL Y +C + +A+R+ ++ E N
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS---VDGCEKALKLFR 206
+ ++M+ GY + +SDA ++F +MP++DV W L+SGY ++ +DG L+ F
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDG----LETFV 126
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M SG+++PN +TF V+++C LG + GL K F D + AL++ + C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
D A R++ ++E P + NS++ G + I+ A F + E + +S+N MI +
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNT-------------------------MISVIPEM-- 359
G+V ++ L +M HR + L++ +I +P++
Sbjct: 247 QSGRVREALGLVVEM-HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305
Query: 360 ---------------------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRK- 391
+RN V+W +I G +Q K+++L+ MR
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365
Query: 392 -LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+AID+ + L C L G+ LH+ +K+ + V SL+ +Y++CG +
Sbjct: 366 LMAIDQF--ALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQ 423
Query: 451 DAQASFSSISSPNVAAWTALMNGYS-------------------------------HHGL 479
+A+ FSS+S ++ +WT+++ YS HG
Sbjct: 424 NAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGA 483
Query: 480 GSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
+ + ++ ML Q D+ P+ T+V + C G G +I G++ +
Sbjct: 484 EEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVAN 543
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ---KMFGL 595
+ + + G + EA++ D+ D V W A+++ + +G++AA+ M
Sbjct: 544 AAITMYSKCGRISEAQKLF-DLLNGKDVVSWNAMITG---YSQHGMGKQAAKTFDDMLSK 599
Query: 596 DKKP--ISAYVILSN 608
KP IS +LS
Sbjct: 600 GAKPDYISYVAVLSG 614
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 215/685 (31%), Positives = 344/685 (50%), Gaps = 90/685 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR LFD+ ++VVSWN M+ GY+ E+ +L + M + ++ ++ TF +IL
Sbjct: 77 GSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSIL 136
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S C+ L G++IH V+++G VG+ L+ YA C + +A+R
Sbjct: 137 SACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARR----------- 185
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
VF M +D V WT L YA+S G E++LK + M +
Sbjct: 186 --------------------VFDAMASRDEVSWTTLTGAYAESGYG-EESLKTYHAMLQE 224
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+ T+ +V+ AC L A +GK +H +++ + D + AL + Y C AF
Sbjct: 225 -RVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKD 283
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISY--------- 318
A V++ L + A N++I G + G++E+A F+R+ E + +Y
Sbjct: 284 AREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACAR 343
Query: 319 --------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
N++I Y+ G + D++++F++MP R ++S
Sbjct: 344 PGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVS---- 399
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
W +++ Y + ++ + M + + + T+ + ACS
Sbjct: 400 -------------WTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPV 446
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+L+ G+ +HA +VK +++ V +L+ MY +CGS+ DA F +S +V W L+
Sbjct: 447 ALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIG 506
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVV 531
G +G G EA+ +E+M + + PNAATFV VLSAC LV EG + F M K YG+V
Sbjct: 507 GLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIV 566
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
PT +HY C+VD+L R+GHL EAE+ I +P++ A +WGALL+AC N+E+GERAA+
Sbjct: 567 PTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEH 626
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
L+ + YV LS IYA G W +RK + VKK+PG SWIE+ VH+F
Sbjct: 627 CLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVA 686
Query: 652 EDRNNPNCNVIYATLEHLTANLNSV 676
D+++P IYA LE L + S+
Sbjct: 687 RDQSHPRTQEIYAELETLKKQMKSL 711
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
L +C L G+ +H H+++ + NVY+ +L+ +Y+ CGS+N+A+ F S+ +
Sbjct: 34 LLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKS 93
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V +W +++GY+H GL EA LF +M ++ + P+ TFV +LSAC ++N G +I
Sbjct: 94 VVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHV 153
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G+ ++ + + G + +A M D V W L A
Sbjct: 154 RVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMA-SRDEVSWTTLTGA 204
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 212/713 (29%), Positives = 352/713 (49%), Gaps = 121/713 (16%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VSTN I+ + G + +AR+LFD MP RTVV+W ++ Y++ + FDE+ L M RS
Sbjct: 80 VSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRS 139
Query: 79 N--VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ + TF+T+L C Q+H +K G++ F+
Sbjct: 140 SSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFL--------------- 184
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+ +++L Y + + A +F ++P+KD V + LI+GY K D
Sbjct: 185 --------------TVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK--D 228
Query: 197 GC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
G +++ LF MR+SG + P+++TF V++A L F G+ +H L + GF D S+
Sbjct: 229 GLYTESIHLFLKMRQSG-HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
G +++FY + R+ + ++F+ + E +
Sbjct: 288 GNQILDFYSKHD-------------------------------RVLETRMLFDEMPELDF 316
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMP----HRSIISLNTMISVIPEM------------ 359
+SYN +I Y+ Q + S F +M R TM+S+ +
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 360 -------------------------------------ERNPVTWNSMISGYVQNNLHEKA 382
+R V+W ++ISGYVQ LH
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L+L+ MR + +STF+ + A + SL G+ LHA ++++ NV+ G+ LVDM
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
Y++CGSI DA F + N +W AL++ ++ +G G A+ F M+E + P++ +
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+GVL+AC G V +G + F++M YG+ P +HY C++DLLGR+G EAE+ + +MP
Sbjct: 557 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 616
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK-KPISAYVILSNIYAVLGKWGKKM 620
E D ++W ++L+AC N + ERAA+K+F ++K + +AYV +SNIYA G+W K
Sbjct: 617 FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 676
Query: 621 DIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
D++K + +KK P SW+E+N ++H FS D+ +PN + I + LTA +
Sbjct: 677 DVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEI 729
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 33/227 (14%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS 70
L T ++++ N + + A +F +P RT VSW ++ GY + L
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 438
Query: 71 LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
L + M SN++ +++TF+T+L A SL+ GKQ+H +++SG F GSGL+ YA
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
C I++A +VF+E MP ++ V W LIS
Sbjct: 499 KCGSIKDAVQVFEE-------------------------------MPDRNAVSWNALISA 527
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+A + DG E A+ F M ESG P+ + V+ AC+ G +G
Sbjct: 528 HADNGDG-EAAIGAFAKMIESGLQ-PDSVSILGVLTACSHCGFVEQG 572
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 215/725 (29%), Positives = 359/725 (49%), Gaps = 114/725 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N AI+ R G L AR+L +MP R VSWNT++ ++ E+L + M +
Sbjct: 76 VYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQ 135
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ T +++LS C + +L DG++ H L +K G + +FV +GLL Y C + +
Sbjct: 136 EGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVAD 195
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A R+FD + NE+ ++ M+ G Q + DA +F +M + + V +S +
Sbjct: 196 AVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSV---LGA 252
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
C +A +Y IR + +H L+++ GF+ D+ +G
Sbjct: 253 CAQACA-------------GDYNVARAIRL---------AQSIHALVVRKGFDSDQHVGN 290
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG------------------- 298
+LI+ Y D AM+V++ + + + + N L+ G +G
Sbjct: 291 SLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEP 350
Query: 299 ----------------RIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM- 341
+ A +F+++++ + ++N+++ GY D+ LF +M
Sbjct: 351 NEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQ 410
Query: 342 -----PHRSIISL---------------------------NTMI---------------- 353
P R+ +++ N M
Sbjct: 411 HQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVG 470
Query: 354 --SVIPEM--ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
+I M ER+ V WNSMISG ++L+E+A + MR+ + T S+++ + ++C+
Sbjct: 471 IAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCA 530
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
L S+ QG+ +HA ++K ++ NVYVG+SL+DMY++CG+++DA+ F+ + N+ AW
Sbjct: 531 RLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNE 590
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-Y 528
+++GY+ +G G +AV LFE ML P++ TF+ VL+ C +GLV+E + F SM+S Y
Sbjct: 591 MIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNY 650
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P +EHYTC++D LGR+G E I MP + DA++W LL+AC N E+GE A
Sbjct: 651 GIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFA 710
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A+ +F LD K S YV+LSNIYA LG+ G +R ++ V K G SW+ A
Sbjct: 711 AKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGARA 770
Query: 649 FSVED 653
F V D
Sbjct: 771 FMVAD 775
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 137/595 (23%), Positives = 263/595 (44%), Gaps = 105/595 (17%)
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
VL +G F+ + L+ Y+ A R F L N ++ + + ++ A
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAA 95
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
D+ +MP ++ V W +I+ A+S D +AL+++R M + G P +T SV+ AC
Sbjct: 96 RDLLGRMPDRNAVSWNTVIAAVARS-DSPGEALEMYRGMLQEGL-APTNFTLASVLSACG 153
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
+ A +G+ HGL +K G + ++ + L+ Y C + A+R++D + +P + +
Sbjct: 154 AVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTA 213
Query: 290 LINGLISMGRIEDAELIFNRLTE---------------------------------ANSI 316
++ GL G ++DA +F R++ A SI
Sbjct: 214 MMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSI 273
Query: 317 SY--------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--- 359
NS+I YA ++D++ ++FE M SI+S N +++ ++
Sbjct: 274 HALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCY 333
Query: 360 ---------------ERNPV-------------------------------TWNSMISGY 373
E N V TWN+++SGY
Sbjct: 334 ERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGY 393
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
Q LH+ ++L+ M+ + R+T +V+ CS LG L+ G+ +H+ VK +++
Sbjct: 394 GQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDM 453
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+V + L+DMYS+CG + AQ F+ ++ +V W ++++G + H L EA F+ M E
Sbjct: 454 FVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMREN 513
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
+ P +++ ++++C R + +G +I + G + + ++D+ + G++ +A
Sbjct: 514 GMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDA 573
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA---QKMFGLDKKPISAYVI 605
F M ++ + V W ++ + GE+A + M +KP S I
Sbjct: 574 RLFFNCMIVK-NIVAWNEMIHG---YAQNGFGEKAVELFEYMLTTKQKPDSVTFI 624
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 218/702 (31%), Positives = 356/702 (50%), Gaps = 64/702 (9%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQM----PIRTVVSWNTMLC 57
+++A T + + + N + G G + AR +FD+ R VSWNTM+
Sbjct: 121 QVHALAVATRLVHDVFV--ANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMIS 178
Query: 58 GYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYEC 117
Y K + +++ + M S + NE FS +++ C L G+Q+H V+++GYE
Sbjct: 179 AYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEK 238
Query: 118 FEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
F + L+ Y+ +IE A VF+ KMP
Sbjct: 239 DVFTANALVDMYSKLGDIEMAATVFE-------------------------------KMP 267
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
DVV W ISG +AL+L M+ SG +PN +T SV++ACA GAF G
Sbjct: 268 AADVVSWNAFISGCVTHGHD-HRALELLLQMKSSGL-VPNVFTLSSVLKACAGAGAFNLG 325
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
+ +HG ++K +FDE + L++ Y D A +V+D + L N+LI+G
Sbjct: 326 RQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHD 385
Query: 298 GRIEDAELIFNRLT------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS--- 348
GR + +F+R+ + N + S++K A + ++++ ++S
Sbjct: 386 GRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSH 445
Query: 349 --------------LNTMISVIPEMERNPV-TWNSMISGYVQNNLHEKALQLYMTMRKLA 393
L+ I V E + + + +M++ Q + E A++L++ M +
Sbjct: 446 VINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKG 505
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
++ S L +AC+ L + +QG+ +HAHL+K F S+V+ G +LV Y++CGSI DA
Sbjct: 506 LEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDAD 565
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
+FS + + +W+A++ G + HG G A+ LF ML++ + PN T VLSAC AG
Sbjct: 566 MAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAG 625
Query: 514 LVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
LV++ K F SMK ++G+ T EHY C++D+LGR+G L +A E + +MP + +A VWGAL
Sbjct: 626 LVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGAL 685
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
L A + E+G AA+K+F L+ + +V+L+N YA G W + +RK + VK
Sbjct: 686 LGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVK 745
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
K+P SW+E+ +VH F V D+++P IY L L +N
Sbjct: 746 KEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMN 787
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 137/588 (23%), Positives = 237/588 (40%), Gaps = 133/588 (22%)
Query: 119 EFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG--------YVQCNLMSDAF 170
E +GS L F ++ +F H + LL S +L G Y +C L S A
Sbjct: 5 ETIGSALARF-------GTSRSLFAGAHLHSHLLKSGLLAGFSNHLLTLYSRCRLPSAAR 57
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMP-NEYTFDSVIRAC 228
VF ++P V W+ L++ Y S +G + AL FR MR G +P NE+ V++ C
Sbjct: 58 AVFDEIPDPCHVSWSSLVTAY--SNNGMPRDALLAFRAMR--GRGVPCNEFALPVVLK-C 112
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS- 287
A F G VH L + D + AL+ Y G D A R++D +
Sbjct: 113 APDVRF--GAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNA 170
Query: 288 ---NSLINGLISMGRIEDAELIFNRLT--------------------------------- 311
N++I+ + + DA +F +
Sbjct: 171 VSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGA 230
Query: 312 ------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
E + + N+++ Y+ G ++ + +FEKMP ++S
Sbjct: 231 VVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVS----------------- 273
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WN+ ISG V + +AL+L + M+ + T S + AC+ G+ G+ +H +V
Sbjct: 274 WNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMV 333
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K + + +V LVDMY++ G ++DA+ F + ++ W AL++G SH G E +
Sbjct: 334 KAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLS 393
Query: 486 LFEIMLEQ--DIVPNAATFVGVLSACV--------------------------------- 510
LF M ++ D+ N T VL +
Sbjct: 394 LFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDS 453
Query: 511 --RAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM---PIELD 565
+ G ++ +K+F+ +S ++ + T ++ L + H +A + M +E D
Sbjct: 454 YWKCGQLDYAIKVFKESRSDDIISS----TTMMTALSQCDHGEDAIKLFVQMLRKGLEPD 509
Query: 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN--IYA 611
+ V +LL+AC ++ E+ Q L K+ ++ V N +YA
Sbjct: 510 SFVLSSLLNAC---TSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYA 554
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 220/664 (33%), Positives = 340/664 (51%), Gaps = 61/664 (9%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I + G + AR +FDQM + VSW TM+ GY+ F E L L M NV
Sbjct: 266 SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV 325
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
++N+ + + A+ L GK+IH L+ + V + L+ YA C E E+AK+
Sbjct: 326 RINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQ 385
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+F L + + WS ++ VQ +GY E+
Sbjct: 386 LFWGLQGRDLVAWSAIIAALVQ--------------------------TGYP------EE 413
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL LF+ M ++ + PN T S++ ACA L GK +H +K + D S G AL+
Sbjct: 414 ALSLFQEM-QNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALV 472
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN--RLTEANSIS- 317
Y C F A+ ++R+ + + NSLING +G +A +F RL+ N +
Sbjct: 473 SMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAG 532
Query: 318 -----------YNSMIKGYAVYGQVDDSKRLFEKMPH--RSIISLNTMISVIPEME---- 360
N + +G ++G + K FE H ++I + +P E
Sbjct: 533 TMVGVVPACALLNDLDQGTCIHGLI--VKLGFESDCHVKNALIDMYAKCGSLPSAEFLFN 590
Query: 361 -----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ VTWN +I+ Y+QN ++A+ + MR TF + A + L + +
Sbjct: 591 KTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFR 650
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+G HA +++ F SN VG SL+DMY++CG ++ ++ F+ + + +W A+++GY+
Sbjct: 651 EGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYA 710
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTL 534
HG G A+ LF +M E + ++ +FV VLSAC AGLV EG KIF SM Y + P L
Sbjct: 711 VHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDL 770
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY C+VDLLGR+G E FIK MP+E DA VWGALL +C N+++GE A +
Sbjct: 771 EHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVK 830
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
L+ + + +V+LS+IYA G+W R ++ L +KK PGCSW+EL ++VHAF V D+
Sbjct: 831 LEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDK 890
Query: 655 NNPN 658
++P
Sbjct: 891 SHPQ 894
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/561 (24%), Positives = 259/561 (46%), Gaps = 57/561 (10%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR++FD P + + WN+M+ Y++ +++E+L + M ++ ++ TF+ +L C
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+L +G H + + G E F+G+GL+ Y+ +++ A+ VFD
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFD------------- 188
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
KMPK+DVV W +I+G ++S D CE A+ FR M+ G P
Sbjct: 189 ------------------KMPKRDVVAWNAMIAGLSQSEDPCE-AVDFFRSMQLVGVE-P 228
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ + ++ +L + +HG + + +F ++ LI+ Y C D A RV+
Sbjct: 229 SSVSLLNLFPGICKLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVF 286
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN-SISYNSMIKGYAVYGQVDDSK 335
D++ + + +++ G G + +F+++ N I+ S + + + D +
Sbjct: 287 DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLE 346
Query: 336 R--------LFEKMPHRSIIS--LNTMISVIPEME-----------RNPVTWNSMISGYV 374
+ L +++ +++ L M + E E R+ V W+++I+ V
Sbjct: 347 KGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALV 406
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
Q E+AL L+ M+ + R T + AC+ L L+ G+ +H VK +S++
Sbjct: 407 QTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLS 466
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
GT+LV MY++CG A +F+ +SS ++ W +L+NGY+ G A+ +F +
Sbjct: 467 TGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSA 526
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
I P+A T VGV+ AC +++G I + G ++D+ + G L AE
Sbjct: 527 INPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAE 586
Query: 555 EFIKDMPIELDAVVWGALLSA 575
D V W +++A
Sbjct: 587 FLFNKTDFTKDEVTWNVIIAA 607
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 129/539 (23%), Positives = 222/539 (41%), Gaps = 100/539 (18%)
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S+ N + +LS C LN L+ QIH ++ SG
Sbjct: 26 SSTYTNYLHYPRLLSSCKHLNPLL---QIHAQIIVSG----------------------- 59
Query: 138 AKRVFDELHEDNEL--LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
F H L L+SL + +C+L FD P ++W +I Y +S
Sbjct: 60 ----FKHHHSITHLINLYSL----FHKCDLARSVFD---STPNPSRILWNSMIRAYTRSK 108
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
E AL+++ M E G P++YTF V++AC EG HG + + G E D I
Sbjct: 109 QYNE-ALEMYYCMVEKGLE-PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFI 166
Query: 256 GGALIEFYCGCEAFDGAMRVYDRL------------------ENPC-------------- 283
G L++ Y A V+D++ E+PC
Sbjct: 167 GAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGV 226
Query: 284 LNASNSLINGLISMGRIEDAEL-------IFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
+S SL+N + ++ + EL +F R + +S N +I Y+ G VD ++R
Sbjct: 227 EPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARR 284
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F++M ++++ V+W +M++GY N + L+L+ M+ +
Sbjct: 285 VFDQM-----------------VDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI 327
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ + F A + L++G+ +H ++ +S++ V T L+ MY++CG A+ F
Sbjct: 328 NKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLF 387
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+ ++ AW+A++ G EA+ LF+ M Q + PN T + +L AC L+
Sbjct: 388 WGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLK 447
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G I + L T +V + + G A M D V W +L++
Sbjct: 448 LGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLING 505
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 217/484 (44%), Gaps = 62/484 (12%)
Query: 19 VSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ST A+ + G A F++M R +V+WN+++ GY++ ++ + +
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S + + T ++ CA LN L G IH L++K G+E V + L+ YA C +
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPS 584
Query: 138 AKRVFDELH-EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+ +F++ +E+ W++++ Y+Q +G+AK
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQ--------------------------NGHAK--- 615
Query: 197 GCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+A+ F MR EN PN TF SV+ A A L AF EG H +I+ GF + +
Sbjct: 616 ---EAISSFHQMRL--ENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLV 670
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-- 313
G +LI+ Y C D + ++++ +++ + N++++G G + A +F+ + E+
Sbjct: 671 GNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQV 730
Query: 314 --NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
+S+S+ S++ G V++ +++F M + I P++E + M+
Sbjct: 731 QIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIK--------PDLEH----YACMVD 778
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
+ L ++ L ++ + ++ + L +C +++ G++ HLVK +
Sbjct: 779 LLGRAGLFDETLGF---IKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN 835
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA-----AWTALMNGYSHHGLGSEAVLL 486
+ L +Y++ G DA + S ++ + +W L N +G ++
Sbjct: 836 PAHF-VVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQ 894
Query: 487 FEIM 490
E M
Sbjct: 895 LESM 898
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 169/425 (39%), Gaps = 88/425 (20%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPI-RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N I + G L +A LF++ + V+WN ++ Y + E++S M N
Sbjct: 570 NALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENF 629
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
N TF ++L A L + +G H +++ G+ VG+ L+ YA C +++ +++
Sbjct: 630 HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEK 689
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+F+E+ + + W+ ML GY + G+ ++
Sbjct: 690 LFNEMDHKDTVSWNAMLSGYA--------------------------VHGHG------DR 717
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIGGAL 259
A+ LF M+ES + + +F SV+ AC G EG K+ H + K + D +
Sbjct: 718 AIALFSLMQESQVQI-DSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACM 776
Query: 260 IEFYCGCEAFDGAM------------RVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
++ FD + V+ L C SN + +G + L+
Sbjct: 777 VDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSN------VKLGEVALDHLV- 829
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM--------PHRSIISLNTMISVI--- 356
+L N + + YA G+ D+ + KM P S + L +
Sbjct: 830 -KLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVG 888
Query: 357 ----PEMERNPVTWNSMIS-----GYVQN------NLHE--KALQLYMTMRKLAIDRTRS 399
P++E + WN+++ GYV + N+ E K + LY +LAI
Sbjct: 889 DKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAI----- 943
Query: 400 TFSVL 404
TF++L
Sbjct: 944 TFALL 948
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 227/713 (31%), Positives = 360/713 (50%), Gaps = 60/713 (8%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+E +++ N + + G L A LFD+MP R V SWNT++ GY + +F + L
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 74 TMHRSNVKL-NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
+MHRS L N TF ++ C L Q+ L K + V + L+ + C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
++ A R+F ++ + ML GY + + A + F M ++DVV W +I+ +
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+S +AL L M G + + T+ S + ACARL + GK +H +I+ + D
Sbjct: 247 QS-GRVREALGLVVEMHRKGVRL-DSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID 304
Query: 253 ESIGGALIEFYCGCEAFDGAMRVY----DR------------LENPCLNASNSLING--- 293
+ ALIE Y C +F A RV+ DR L+ C + S L N
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364
Query: 294 -LISMGRIEDAELI---FNRL-----------------TEANSISYNSMIKGYAVYGQVD 332
L+++ + A LI FNR+ A +S NS+I YA G +
Sbjct: 365 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVS-NSLISLYAKCGDLQ 423
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNSMISGYVQNNL 378
+++ +F M R I+S +MI+ ++ RN +TWN+M+ Y+Q+
Sbjct: 424 NAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGA 483
Query: 379 HEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
E L++Y M + + T+ LF C+ +G+ + G + H VK NV V
Sbjct: 484 EEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVAN 543
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+ + MYS+CG I++AQ F ++ +V +W A++ GYS HG+G +A F+ ML + P
Sbjct: 544 AAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKP 603
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
+ ++V VLS C +GLV EG F M + +G+ P LEH++C+VDLLGR+GHL EA++
Sbjct: 604 DYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDL 663
Query: 557 IKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
I MP++ A VWGALLSAC N E+ E AA+ +F LD +Y++L+ IY+ GK
Sbjct: 664 IDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKS 723
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+RK + +KK+PG SW+E+ ++VH F +D ++P I ++ L
Sbjct: 724 DDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDEL 776
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/615 (23%), Positives = 271/615 (44%), Gaps = 108/615 (17%)
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD-ELHEDN 149
L C +L + +H ++ G F+ + LL Y +C + +A+R+ ++ E N
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS---VDGCEKALKLFR 206
+ ++M+ GY + +SDA ++F +MP++DV W L+SGY ++ +DG L+ F
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDG----LETFV 126
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M SG+++PN +TF V+++C LG + GL K F D + AL++ + C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
D A R++ ++E P + NS++ G + I+ A F + E + +S+N MI +
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNT-------------------------MISVIPEM-- 359
G+V ++ L +M HR + L++ +I +P++
Sbjct: 247 QSGRVREALGLVVEM-HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305
Query: 360 ---------------------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRK- 391
+RN V+W +I G +Q K+++L+ MR
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365
Query: 392 -LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+AID+ + L C L G+ LH+ +K+ + V SL+ +Y++CG +
Sbjct: 366 LMAIDQF--ALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQ 423
Query: 451 DAQASFSSISSPNVAAWTALMNGYS-------------------------------HHGL 479
+A+ FSS+S ++ +WT+++ YS HG
Sbjct: 424 NAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGA 483
Query: 480 GSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
+ + ++ ML Q D+ P+ T+V + C G G +I G++ +
Sbjct: 484 EEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVAN 543
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ---KMFGL 595
+ + + G + EA++ D+ D V W A+++ + +G++AA+ M
Sbjct: 544 AAITMYSKCGRISEAQKLF-DLLNGKDVVSWNAMITG---YSQHGMGKQAAKTFDDMLSK 599
Query: 596 DKKP--ISAYVILSN 608
KP IS +LS
Sbjct: 600 GAKPDYISYVAVLSG 614
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 213/675 (31%), Positives = 342/675 (50%), Gaps = 96/675 (14%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
++ ++ N I R GQ+ +AR +FD+MP + +VSWN+M+ GY + + E+ L M
Sbjct: 14 SVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM 73
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
N N LI G Y +
Sbjct: 74 PERNT--------------VSWNGLISG-------------------------YVKNRMV 94
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
EA++ FD + E N + W+ M+ GYVQ L+S+A +F +MP+K+VV WT ++ G + V
Sbjct: 95 SEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQ-V 153
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
++A LF + MP + D V R
Sbjct: 154 RRIDEARGLF-------DIMPVK---DVVART---------------------------- 175
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
+I YC A ++D + + + ++I+G + G+++ A +F + E N
Sbjct: 176 --NMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNE 233
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ER 361
+S+ +M+ GY G+++++ LF+ MP +++++ N MI V ++ E+
Sbjct: 234 VSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREK 293
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ TW++MI Y + +AL L+ M++ + + + C+ L SL G+ +H
Sbjct: 294 DDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVH 353
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
A LVK+ F+S+V+V + L+ MY +CG + A+ F S ++ W +++ GY+ HGL
Sbjct: 354 AELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVE 413
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCV 540
EA+ +F M + + TFVGVLSAC G V EG++IF SMKS Y V P EHY C+
Sbjct: 414 EALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACM 473
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
VDLLGR+G +++A + I+ MP+E DA++WGALL AC MNM + E AA+K+ L+ K
Sbjct: 474 VDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNA 533
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE-DRNNPNC 659
Y++LSNIYA G+WG ++R+ + +V K PGCSWIE+ RVH F+ +P
Sbjct: 534 GPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPEL 593
Query: 660 NVIYATLEHLTANLN 674
+ I LE L L
Sbjct: 594 SSIMKMLEKLDGMLR 608
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 150/348 (43%), Gaps = 52/348 (14%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS 70
+M + ++ TN C + G+L AR LFD+MP R V+SW TM+ GY + + D +
Sbjct: 165 IMPVKDVVARTNMISGYC-QEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARK 223
Query: 71 LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
L M N E + +L Y
Sbjct: 224 LFEVMPEKN---------------------------------------EVSWTAMLMGYT 244
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
IEEA +FD + + + M++G+ Q ++ A VF ++ +KD W+ +I
Sbjct: 245 QGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKV 304
Query: 191 YAKSVDGCE-KALKLFRWMRESG--ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
Y + G E +AL LF M+ G N P + SV+ CA L + G+ VH L+K
Sbjct: 305 YERK--GFEVEALNLFALMQREGVQSNFP---SLISVLSVCASLASLDHGRQVHAELVKS 359
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
F+ D + LI Y C A +++DR + NS+I G G +E+A +F
Sbjct: 360 QFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVF 419
Query: 308 NRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
+ + + + +++ ++ + G+V + +FE M + ++ T
Sbjct: 420 HEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKT 467
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 208/655 (31%), Positives = 346/655 (52%), Gaps = 85/655 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N ++ + G L + +F+ MP R VSWN + GY+ + +++ + M +
Sbjct: 71 LFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLK 130
Query: 78 -SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ + LN TFST+L +C++ + G+QI+ +LK G+ FVGS L+ Y I
Sbjct: 131 DAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIY 190
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+AKR FDE+ E N ++ + M+ G ++C ++ ++ +F + ++D + WT +I+G + +
Sbjct: 191 DAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ--N 248
Query: 197 GCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
G E+ AL +FR MR +G M +++TF SV+ AC L A EGK +H +I+ + + +
Sbjct: 249 GLEREALDMFREMRLAGFAM-DQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
G AL++ Y C + I+ AE +F R+ + N
Sbjct: 308 GSALVDMYSKCRS-------------------------------IKSAETVFKRMPQKNV 336
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
IS+ +M+ GY G +++ ++F EM+RN V + G V
Sbjct: 337 ISWTAMLVGYGQNGFSEEAVKIFF------------------EMQRNGVEPDDFTLGSV- 377
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
+C+ L SL++G H + + S + V
Sbjct: 378 -----------------------------ISSCANLASLEEGAQFHCRALVSGLISFITV 408
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
+L+ +Y +CGS ++ F+ ++ + +WTAL+ GY+ G +E + LFE ML +
Sbjct: 409 SNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGL 468
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
P+ TF+GVLSAC RAGLV +G++ F SM K +G++P ++H TC++DLLGR+G L EA
Sbjct: 469 KPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEAR 528
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
FI +MP D V W LLS+C +ME+G+ AA + L+ + ++YV+LS++YA G
Sbjct: 529 NFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKG 588
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
KW K +R+ + V+K+PG SWI+ +VH FS +D+++P IYA LE L
Sbjct: 589 KWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKL 643
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 234/489 (47%), Gaps = 50/489 (10%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
++++L +C + + K++HCL+LK+ + F+ + L+ Y + A VFD +
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ N W+ +L Y + L+S +F MP +D V W ISGYA + C A+++++
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYA-NYGSCSDAVRVYK 126
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M + N TF +++ C++ G+ ++G ++K GF D +G L++ Y
Sbjct: 127 LMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMY--- 183
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
+G I DA+ F+ + E N + N+MI G
Sbjct: 184 ----------------------------TKLGLIYDAKRYFDEMPERNVVMCNTMITGLM 215
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G +++S+RLF + ER+ ++W MI+G +QN L +AL ++
Sbjct: 216 RCGMIEESQRLFCGLK-----------------ERDSISWTIMITGLMQNGLEREALDMF 258
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
MR + TF + AC L +L +G+ +HA++++T + NV+VG++LVDMYS+C
Sbjct: 259 REMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKC 318
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
SI A+ F + NV +WTA++ GY +G EAV +F M + P+ T V+
Sbjct: 319 RSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVI 378
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
S+C + EG + G++ + ++ L G+ G + +M I D
Sbjct: 379 SSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIR-DE 437
Query: 567 VVWGALLSA 575
V W ALL+
Sbjct: 438 VSWTALLAG 446
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 196/465 (42%), Gaps = 112/465 (24%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +V N IT R G + ++ LF + R +SW M+ G + E+L +
Sbjct: 201 ERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFRE 260
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M + +++ TF ++L+ C L +L +GKQIH V+++ ++ FVGS L+ Y+ C
Sbjct: 261 MRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRS 320
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I+ A+ VF + + N + W+ MLVGY Q +G++
Sbjct: 321 IKSAETVFKRMPQKNVISWTAMLVGYGQ--------------------------NGFS-- 352
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
E+A+K+F M+ +G P+++T SVI +CA L + EG H + G +
Sbjct: 353 ----EEAVKIFFEMQRNGVE-PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFIT 407
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+ ALI Y C G E++ +F + +
Sbjct: 408 VSNALITLYGKC-------------------------------GSTENSHRLFTEMNIRD 436
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
+S+ +++ GYA +G+ +++ LFE+M + ++ + VT+ ++S
Sbjct: 437 EVSWTALLAGYAQFGKANETIGLFERM-------------LAHGLKPDGVTFIGVLSACS 483
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
+ L EK LQ + +M K ++ H C+C
Sbjct: 484 RAGLVEKGLQYFESMIK-----EHGIMPIVDH-CTC------------------------ 513
Query: 435 VGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
++D+ R G + +A+ +++ P+V W L++ HG
Sbjct: 514 ----IIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
+ I +N IT G+ G + LF +M IR VSW +L GY+++ K +E++ L M
Sbjct: 404 SFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERM 463
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQ-IHCLVLKSGYECFEFVGSGLLFFYANCFE 134
+K + TF +LS C++ + G Q ++ + G + ++
Sbjct: 464 LAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGR 523
Query: 135 IEEAKRVFDEL--HEDNELLWSLMLVGYVQCNLMSD------AFDVFIKMPKKDVVVWTK 186
+EEA+ + + H D + W+ +L C + D A D I + ++ +
Sbjct: 524 LEEARNFINNMPCHPD-VVGWATLL---SSCRVHGDMEIGKWAADSLIALEPQNPASYVL 579
Query: 187 LISGYAKSVDGCEKALKLFRWMRE 210
L S YA S +K +L R MR+
Sbjct: 580 LSSLYA-SKGKWDKVAQLRRGMRD 602
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 204/649 (31%), Positives = 346/649 (53%), Gaps = 51/649 (7%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N ++ + G+L A +F++MP VSW M+ GY++ +F+ ++ + M
Sbjct: 79 VFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVS 138
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+V + T + +L+ CA + L G+++H V+K G + V + LL YA +
Sbjct: 139 DDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVT 198
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AK VFD + + W+ M+ ++Q L+ A F +M ++DVV W +ISGY + G
Sbjct: 199 AKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQH--G 256
Query: 198 CEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
++ AL +F M + P+++T S + ACA L GK +H +I+ F+ ++G
Sbjct: 257 FDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVG 316
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
ALI Y + A ++ ++ S+I+ L + I
Sbjct: 317 NALISMYSKSGGVEIAQKIIEQ----------SMISNL-------------------DVI 347
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
++ +++ GY G ++ ++R+F+ + R + V W +MI GYVQN
Sbjct: 348 AFTALLDGYVKLGDINPARRIFDSLRVRDV-----------------VAWTAMIVGYVQN 390
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
++ A++L+ +M K T + + S L SL G+ +HA ++ S+V V
Sbjct: 391 GFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVS 450
Query: 437 TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
+L+ MY++ GSINDA+ F+ I + WT+++ + HGLG EA+ LFE MLE I
Sbjct: 451 NALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGI 510
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
P+ T+VGVLSAC GLV +G + M+ ++ ++PT HY C++DL GR+G L EA
Sbjct: 511 KPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAH 570
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
FI++MPIE D + WG+LL++C N+E+ E AA+++ ++ + AY L+N+Y+ G
Sbjct: 571 AFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACG 630
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
+W +IRK + VKKD G SW+++ ++VH F V+D +P + IY
Sbjct: 631 QWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIY 679
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 218/448 (48%), Gaps = 55/448 (12%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+++ L + GK IH ++K+G F+ + L+ FYA I +A RVFDE+
Sbjct: 16 YTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMP 75
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ W+++L GY + + +A VF +MP+ D V WT +I GY + + E A+ +FR
Sbjct: 76 VKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQ-MGQFENAIGMFR 134
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M S + P ++T +V+ +CA + G+ VH ++K G S+ +L+ Y
Sbjct: 135 EMV-SDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKS 193
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
A V+DR++ ++ N++I+ + G ++ A++ F ++ E + +S+N+MI GY
Sbjct: 194 GDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYN 253
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
+G ++ +F KM S S P+
Sbjct: 254 QHGFDREALDIFSKMLMDS--------SSKPD---------------------------- 277
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
+ T + AC+ L +L+ G+ +HAH+++T F++ VG +L+ MYS+
Sbjct: 278 -----------KFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKS 326
Query: 447 GSINDAQASF--SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
G + AQ S IS+ +V A+TAL++GY G + A +F+ + +D+V A VG
Sbjct: 327 GGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVG 386
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVP 532
V+ G + M++FRSM G P
Sbjct: 387 Y----VQNGFNQDAMELFRSMIKEGPKP 410
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 205/662 (30%), Positives = 344/662 (51%), Gaps = 56/662 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD+M ++VVSW + GY+ + + + + M + V N T+ ++L
Sbjct: 175 GSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVL 234
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ + +L GK +H +L +G+E VG+ L+ YA
Sbjct: 235 NAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYA--------------------- 273
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+C D VF K+ +D++ W +I G A+ E+A +++ M+
Sbjct: 274 ----------KCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG-GYWEEASEVYNQMQRE 322
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G MPN+ T+ ++ AC A GK +H + K GF D + ALI Y C +
Sbjct: 323 GV-MPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKD 381
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIK---- 323
A V+D++ + + ++I GL G +A ++ + +A N ++Y S++
Sbjct: 382 ARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSS 441
Query: 324 ------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE--------MERNPVTWNSM 369
G ++ QV ++ + +++++ +M + + ++R+ V +N+M
Sbjct: 442 PAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAM 501
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
I GY +NL ++AL+L+ +++ + + T+ + +AC+ GSL+ + +H + K F
Sbjct: 502 IGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGF 561
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
S+ VG +LV Y++CGS +DA F ++ NV +W A++ G + HG G +A+ LFE
Sbjct: 562 FSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFER 621
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSG 548
M + + P+ TFV +LSAC AGL+ EG + F SM + + ++PT+EHY C+VDLLGR+G
Sbjct: 622 MKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAG 681
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L EAE IK MP + + +WGALL AC N+ V ERAA+ LD YV LS+
Sbjct: 682 QLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSH 741
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YA G W +RK + V K+PG SWI++ ++H F EDR++P IYA L+
Sbjct: 742 MYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDR 801
Query: 669 LT 670
LT
Sbjct: 802 LT 803
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/610 (25%), Positives = 287/610 (47%), Gaps = 96/610 (15%)
Query: 7 QSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAK 64
Q +T+ Q T+ N I +CG + AR ++ ++ RTV SWN M+ GY ++
Sbjct: 51 QHRTVPDQYTVNALINMYI-QCG---SIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGY 106
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
+++L L+ M + + + TT + LS C +L G++IH +++G V +
Sbjct: 107 IEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANC 166
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
+L YA C IEEA+ VFD++ + + + W++ + GY C AF++F KM ++ VV
Sbjct: 167 ILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVV-- 224
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
PN T+ SV+ A + A GK VH +
Sbjct: 225 -------------------------------PNRITYISVLNAFSSPAALKWGKAVHSRI 253
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
+ G E D ++G AL++ Y C ++ +V+++L N L A N++I GL G E+A
Sbjct: 254 LNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEAS 313
Query: 305 LIFNRLTE----ANSISY-----------------------------------NSMIKGY 325
++N++ N I+Y N++I Y
Sbjct: 314 EVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMY 373
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
+ G + D++ +F+KM + +IS W +MI G ++ +AL +
Sbjct: 374 SRCGSIKDARLVFDKMVRKDVIS-----------------WTAMIGGLAKSGFGAEALTV 416
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
Y M++ ++ R T++ + +ACS +L+ G+ +H +V+ ++ +VG +LV+MYS
Sbjct: 417 YQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSM 476
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CGS+ DA+ F + ++ A+ A++ GY+ H LG EA+ LF+ + E+ + P+ T++ +
Sbjct: 477 CGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINM 536
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
L+AC +G + +I ++ G +V + G +A + M + +
Sbjct: 537 LNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKM-TKRN 595
Query: 566 AVVWGALLSA 575
+ W A++
Sbjct: 596 VISWNAIIGG 605
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/551 (24%), Positives = 248/551 (45%), Gaps = 92/551 (16%)
Query: 66 DESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
D ++ +V + + ++N + + +L C ++ L+ G+Q+H +++ ++ + L
Sbjct: 5 DGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNAL 64
Query: 126 LFFYANCFEIEEAKRVFDELH--EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
+ Y C IEEA++V+ +L E W+ M+VGY+Q
Sbjct: 65 INMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQ--------------------- 103
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
GY EKALKL R M++ G P+ T S + +C GA G+ +H
Sbjct: 104 -----YGY------IEKALKLLRQMQQHGL-APDRTTIMSFLSSCKSPGALEWGREIHFQ 151
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA 303
++ G FD + ++ Y C + + A V+D++E + + I G GR E A
Sbjct: 152 AMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETA 211
Query: 304 ELIFNRLTE----ANSISY-----------------------------------NSMIKG 324
IF ++ + N I+Y +++K
Sbjct: 212 FEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKM 271
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
YA G D +++FEK+ +R +I+ WN+MI G + E+A +
Sbjct: 272 YAKCGSYKDCRQVFEKLVNRDLIA-----------------WNTMIGGLAEGGYWEEASE 314
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
+Y M++ + + T+ +L +AC +L G+ +H+ + K F S++ V +L+ MYS
Sbjct: 315 VYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYS 374
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
RCGSI DA+ F + +V +WTA++ G + G G+EA+ +++ M + + PN T+
Sbjct: 375 RCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTS 434
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
+L+AC + G +I + + G+ +V++ G + +A + M I+
Sbjct: 435 ILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQR 493
Query: 565 DAVVWGALLSA 575
D V + A++
Sbjct: 494 DIVAYNAMIGG 504
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 153/327 (46%), Gaps = 31/327 (9%)
Query: 306 IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
I T + + N++I Y G +++++++++K+ + MER +
Sbjct: 49 IIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSY---------------MERTVHS 93
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WN+M+ GY+Q EKAL+L M++ + R+T +C G+L+ G+ +H +
Sbjct: 94 WNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAM 153
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ +V V +++MY++CGSI +A+ F + +V +WT + GY+ G A
Sbjct: 154 QAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFE 213
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
+F+ M ++ +VPN T++ VL+A + G + + + G T +V +
Sbjct: 214 IFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYA 273
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGAL---LSACWFWMNMEVGERAAQKMFGLDKKPIS- 601
+ G + + + + + D + W + L+ +W E A++ + ++ +
Sbjct: 274 KCGSYKDCRQVFEKL-VNRDLIAWNTMIGGLAEGGYW------EEASEVYNQMQREGVMP 326
Query: 602 ---AYVILSN--IYAVLGKWGKKMDIR 623
YVIL N + + WGK++ R
Sbjct: 327 NKITYVILLNACVNSAALHWGKEIHSR 353
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 4 YATQSQTLMTQETLIVST---NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+A + TL+ + T N ++ + G A +F++M R V+SWN ++ G +
Sbjct: 548 WAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSA 607
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHC 108
+ + ++L L M VK + TF ++LS C+ L +G++ C
Sbjct: 608 QHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFC 655
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/613 (31%), Positives = 339/613 (55%), Gaps = 53/613 (8%)
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYE-CFEFVG 122
K +E++S + + R ++L+ T +++L CA +L +GK++H + +G + F+
Sbjct: 39 KLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLS 98
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ L+ YA C + EA++VFD++ N W+ ML GY + ++ A +F KMP+KDVV
Sbjct: 99 NHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVV 158
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W ++ +A+ ++AL+ + R+ G N ++F V+ C +L + VHG
Sbjct: 159 SWNTMVIAHAQ-CGYWDEALRFYSEFRQLGIQC-NGFSFAGVLTVCVKLKEVGLTRQVHG 216
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
++ GF L N L S+S+++ + G + D
Sbjct: 217 QILVAGF-----------------------------LSNVVL--SSSVLDAYVKCGLMGD 245
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
A +F+ ++ + +++ +M+ GYA +G + + LF +MP E+N
Sbjct: 246 ARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMP-----------------EKN 288
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
PV+W ++ISGY +N + KAL+L+ M + + TFS AC+ + SL+ G+ +HA
Sbjct: 289 PVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHA 348
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGS 481
+L++ F+ N V ++L+DMYS+CGS+ + F + + +V W +++ + HG G
Sbjct: 349 YLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGE 408
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCV 540
EA+ + + M+ P+ TFV +L+AC +GLV +G+ F SM YG+VP+ EHY C+
Sbjct: 409 EAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACL 468
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
+DLLGR+G E + ++ MP + D VW ALL C ++E+G +AA+++ L+ +
Sbjct: 469 IDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSS 528
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
+AYV+LS+IYAVLG+W +R+ + +VKK+ SW+E+ ++VH+FSV D ++P
Sbjct: 529 TAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSFSVSDSSHPLKE 588
Query: 661 VIYATLEHLTANL 673
IY+ LE L +
Sbjct: 589 QIYSVLEQLAGQM 601
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 178/329 (54%), Gaps = 7/329 (2%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N ++ + G + AR LFD+MP + VVSWNTM+ +++ +DE+L S +
Sbjct: 126 LYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQ 185
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ N +F+ +L+VC +L + +Q+H +L +G+ + S +L Y C + +
Sbjct: 186 LGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGD 245
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+++FDE+ + L W+ M+ GY + M A ++F++MP+K+ V WT LISGYA++ G
Sbjct: 246 ARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMG 305
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
KAL+LF M P+++TF S + ACA + + GK +H L++ F+ + +
Sbjct: 306 -HKALELFTKMMLF-HVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVS 363
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPC-LNASNSLINGLISMGRIEDAELIFNRLTEA--- 313
ALI+ Y C + +V+D + N + N++I+ L G E+A + + + +
Sbjct: 364 ALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAK 423
Query: 314 -NSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ I++ ++ + G V FE M
Sbjct: 424 PDKITFVVILNACSHSGLVQQGLNFFESM 452
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 216/683 (31%), Positives = 350/683 (51%), Gaps = 90/683 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E ++ +NKAIT R G++ A LF MP R+ ++N ML GYS + L L ++
Sbjct: 35 EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSA----NGRLPLAAS 90
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQI---------------------HCLV-LK 112
+ R+ + + +++T+L A +SL D + + H LV L
Sbjct: 91 LFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLA 150
Query: 113 SGY-----ECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
Y E +G+L Y +EEA+ +F+ E + + W+ ++ GYVQ MS
Sbjct: 151 RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMS 210
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
+A ++F +MP +DVV W ++SGYA+ D E A +LF + + +T+ +V+
Sbjct: 211 EARELFDRMPGRDVVSWNIMVSGYARRGDMVE-ARRLF-----DAAPVRDVFTWTAVVSG 264
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
A+ G E + RV+D + +
Sbjct: 265 YAQNGMLEEAR-----------------------------------RVFDAMPERNAVSW 289
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N+++ I +++A+ +FN + N S+N+M+ GYA G ++++K +F+ MP
Sbjct: 290 NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP----- 344
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
+++ V+W +M++ Y Q E+ LQL++ M + RS F+ +
Sbjct: 345 ------------QKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLST 392
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ + +L+ G LH L++ + +VG +L+ MY +CG++ DA+ +F + +V +W
Sbjct: 393 CADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSW 452
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
++ GY+ HG G EA+ +F++M P+ T VGVL+AC +GLV +G+ F SM
Sbjct: 453 NTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHH 512
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+GV EHYTC++DLLGR+G L EA + +KDMP E D+ +WGALL A N E+G
Sbjct: 513 DFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGR 572
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
AA+K+F L+ + YV+LSNIYA GKW +R + VKK PG SWIE+ ++V
Sbjct: 573 SAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKV 632
Query: 647 HAFSVEDRNNPNCNVIYATLEHL 669
H FS D +P IYA LE L
Sbjct: 633 HTFSAGDCVHPEKEKIYAFLEDL 655
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 159/346 (45%), Gaps = 69/346 (19%)
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD----- 332
RLE P + SN I + GR+ DAE +F + ++ +YN+M+ GY+ G++
Sbjct: 33 RLE-PEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASL 91
Query: 333 --------------------------DSKRLFEKMPHRSIISLNTMIS------------ 354
D++ LF++MP R ++ N MIS
Sbjct: 92 FRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLAR 151
Query: 355 ----VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
+ P E++ V+WN M++ YV+N E+A L+ +R+ + +
Sbjct: 152 HYFDLAP--EKDAVSWNGMLAAYVRNGRVEEARGLF---------NSRTEWDAISWNALM 200
Query: 411 LGSLQQGQLLHAH-LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
G +Q G++ A L +V +V Y+R G + +A+ F + +V WTA
Sbjct: 201 SGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTA 260
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
+++GY+ +G+ EA +F+ M E+ NA ++ +++A ++ +++E ++F M
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMMPCRN 316
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
V + ++ ++G L EA+ MP + DAV W A+L+A
Sbjct: 317 VAS----WNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 209/648 (32%), Positives = 349/648 (53%), Gaps = 80/648 (12%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
N + F+ +L C + S + +H +L + + F+ + L+ Y C +++A+++F
Sbjct: 14 NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
D + + N W+ ++ + + +A +F MP+ D W ++SG+A+ D E++L
Sbjct: 74 DRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH-DRFEESL 132
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
+ F M + + NEY+F S + ACA L G VH L+ K + D +G ALI+
Sbjct: 133 EYFVKMHRE-DFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 263 YCGC-------EAFDG------------------------AMRVYDRLENPCLNASN--- 288
Y C E F G A+ V+ R+ + L
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 289 -SLINGLISMGRIEDAELIFNRLTEANS-----ISYNSMIKGYAVYGQVDDSKRLFEKMP 342
S+++ S+ +++ I R+ + N + N+++ YA +V++++R+F++M
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311
Query: 343 HRSIISLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMT 388
R+++S +M+S + +M +RN V+WN++I+GY QN +E+AL+L+
Sbjct: 312 IRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRL 371
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
+++ +I T TF G LL +S+++VG SL+DMY +CGS
Sbjct: 372 LKRESIWPTHYTF---------------GNLL---------KSDIFVGNSLIDMYMKCGS 407
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
I D F + + +W A++ GY+ +G G+EA+ +F ML P+ T +GVL A
Sbjct: 408 IEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCA 467
Query: 509 CVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
C AGLV EG F SM+ +G++P +HYTC+VDLLGR+G L+EA+ I+ MP+ DAVV
Sbjct: 468 CSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVV 527
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
WG+LL+AC N+E+G+ AA+K+ +D YV+LSN+YA LG+WG + +RK +
Sbjct: 528 WGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQ 587
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
V K PGCSWIE+ SRVH F V+D+++P+ IY+ L+ LT + V
Sbjct: 588 QGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRV 635
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 152/548 (27%), Positives = 256/548 (46%), Gaps = 79/548 (14%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ ++G L A LF MP SWN+M+ G+++ +F+ESL MHR +
Sbjct: 85 NSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFL 144
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
LNE +F + LS CA L L G Q+H LV KS Y ++GS L+ Y+ C + A+ V
Sbjct: 145 LNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEV 204
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F + E N + W+ ++ Y Q S+A +VF++M + SG
Sbjct: 205 FSGMIERNLVTWNSLITCYEQNGPASEALEVFVRM----------MDSGLE--------- 245
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGALI 260
P+E T SV+ ACA L A EG +H ++K F D +G AL+
Sbjct: 246 --------------PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALV 291
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNS 320
+ Y C + A RV+DR+ + + S+++G ++ A +F+++T+ N +S+N+
Sbjct: 292 DMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNA 351
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISL---------------NTMIS----------- 354
+I GY G+ +++ RLF + SI N++I
Sbjct: 352 LIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDG 411
Query: 355 --VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
V +M ER+ V+WN++I GY QN +ALQ++ M T + ACS
Sbjct: 412 SRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHA 471
Query: 412 GSLQQGQLLHAHLVK---TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAW 467
G +++G+ + + P + + T +VD+ R G +N+A+ ++ +P+ W
Sbjct: 472 GLVEEGRHYFFSMEEHGLIPLKDHY---TCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVW 528
Query: 468 TALMNGYSHHG---LGSEAVLLFEIMLEQDIVP-NAATFVGVLSACVRAGLVNEGMKIFR 523
+L+ HG +G A E +LE D P N+ +V + + G + +++ +
Sbjct: 529 GSLLAACKVHGNIEMGKHAA---EKLLEID--PWNSGPYVLLSNMYAELGRWGDVVRVRK 583
Query: 524 SMKSYGVV 531
M+ GV
Sbjct: 584 LMRQQGVT 591
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 158/349 (45%), Gaps = 49/349 (14%)
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
+PN F ++ +C R + ++VH ++ F + I LI+ Y C+ D A +
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
++DR+ NSLI+ L G +++A +F + E + S+NSM+ G+A + + ++S
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
F KM HR LN
Sbjct: 132 LEYFVKM-HREDFLLNEY------------------------------------------ 148
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+F AC+ L L G +HA + K+ + ++VY+G++L+DMYS+CGS+ A+
Sbjct: 149 -----SFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEE 203
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
FS + N+ W +L+ Y +G SEA+ +F M++ + P+ T V+SAC
Sbjct: 204 VFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCA 263
Query: 515 VNEGMKIF-RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+ EG++I R +K+ L +VD+ + ++EA M I
Sbjct: 264 LKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI 312
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 24/159 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS ++ R + AR +F +M R VVSWN ++ GY++ + +E+L L + R
Sbjct: 315 VVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKR 374
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ TF + LKS FVG+ L+ Y C IE+
Sbjct: 375 ESIWPTHYTFGNL--------------------LKSDI----FVGNSLIDMYMKCGSIED 410
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM 176
RVF+++ E + + W+ ++VGY Q ++A +F KM
Sbjct: 411 GSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKM 449
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 216/683 (31%), Positives = 350/683 (51%), Gaps = 90/683 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E ++ +NKAIT R G++ A LF MP R+ ++N ML GYS + L L ++
Sbjct: 35 EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSA----NGRLPLAAS 90
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQI---------------------HCLV-LK 112
+ R+ + + +++T+L A +SL D + + H LV L
Sbjct: 91 LFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLA 150
Query: 113 SGY-----ECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
Y E +G+L Y +EEA+ +F+ E + + W+ ++ GYVQ MS
Sbjct: 151 RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMS 210
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
+A ++F +MP +DVV W ++SGYA+ D E A +LF + + +T+ +V+
Sbjct: 211 EARELFDRMPGRDVVSWNIMVSGYARRGDMVE-ARRLF-----DAAPVRDVFTWTAVVSG 264
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
A+ G E + RV+D + +
Sbjct: 265 YAQNGMLEEAR-----------------------------------RVFDAMPERNAVSW 289
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N+++ I +++A+ +FN + N S+N+M+ GYA G ++++K +F+ MP
Sbjct: 290 NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP----- 344
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
+++ V+W +M++ Y Q E+ LQL++ M + RS F+ +
Sbjct: 345 ------------QKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLST 392
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ + +L+ G LH L++ + +VG +L+ MY +CG++ DA+ +F + +V +W
Sbjct: 393 CADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSW 452
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
++ GY+ HG G EA+ +F++M P+ T VGVL+AC +GLV +G+ F SM
Sbjct: 453 NTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHH 512
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+GV EHYTC++DLLGR+G L EA + +KDMP E D+ +WGALL A N E+G
Sbjct: 513 DFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGR 572
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
AA+K+F L+ + YV+LSNIYA GKW +R + VKK PG SWIE+ ++V
Sbjct: 573 SAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKV 632
Query: 647 HAFSVEDRNNPNCNVIYATLEHL 669
H FS D +P IYA LE L
Sbjct: 633 HTFSAGDCVHPEKEKIYAFLEDL 655
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 223/670 (33%), Positives = 347/670 (51%), Gaps = 60/670 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G + AR +FD +P ++ V+W TM+ G K + SL L + NV + ST
Sbjct: 195 KEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILST 254
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C+ L L GKQIH +L+ G+E + + L+ Y C + A ++FD + N
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKN 314
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ +L GY Q +L +A ++F MPK +
Sbjct: 315 IISWTTLLSGYKQNSLHKEAMELFTSMPKFGL---------------------------- 346
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P+ + S++ +CA L A G VH IK D + +LI+ Y C+
Sbjct: 347 -----KPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMG---RIEDAELIFN----RLTEANSISYNSMI 322
A +V+D + N++I G +G + DA IF+ RL + +++ S++
Sbjct: 402 TEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLL 461
Query: 323 KGYAVYGQVDDSKR----LFEKMPHRSIISLNTMIS-------------VIPEME-RNPV 364
+ A + SK+ +F+ + I + + +I+ V EM+ ++ V
Sbjct: 462 RASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLV 521
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHAH 423
WNSM SGYVQ + +E+AL L++ + +L+ DR TF + A L SLQ GQ H
Sbjct: 522 IWNSMFSGYVQQSENEEALNLFLEL-QLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQ 580
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
L+K E N Y+ +L+DMY++CGS DA +F S +S +V W ++++ Y++HG G +A
Sbjct: 581 LLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKA 640
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
+ + E M+ + I PN TFVGVLSAC AGLV +G+K F M +G+ P EHY C+V L
Sbjct: 641 LQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSL 700
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
LGR+G L+EA E I+ MP + A+VW +LLS C N+E+ E AA+ D K ++
Sbjct: 701 LGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSF 760
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
+LSNIYA G W +R+R+ V K+PG SWIE+N VH F +D+++ N IY
Sbjct: 761 TLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIY 820
Query: 664 ATLEHLTANL 673
L+ L +
Sbjct: 821 EVLDDLLVQI 830
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 215/473 (45%), Gaps = 63/473 (13%)
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
E + L ++++ Y + M A VF KMP++++V W+ ++S E++L +F
Sbjct: 76 ELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSA-CNHHGFYEESLVVFL 134
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKV--VHGLLIKCGFEFDESIGGALIEFYC 264
+ +N PNEY S I+AC+ L V + L+K F+ D +G LI+FY
Sbjct: 135 DFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYL 194
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS------- 317
D A V+D L ++I+G + MGR + +F +L E N +
Sbjct: 195 KEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILST 254
Query: 318 --------------------------------YNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
N +I Y G+V + +LF+ MP+++
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKN 314
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
IIS W +++SGY QN+LH++A++L+ +M K + S +
Sbjct: 315 IIS-----------------WTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSIL 357
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
+C+ L +L+ G +HA+ +K ++ YV SL+DMY++C + +A+ F ++ +V
Sbjct: 358 TSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVV 417
Query: 466 AWTALMNGYSHHGLGSE---AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
+ A++ GYS G E A+ +F M + I P+ TFV +L A + +I
Sbjct: 418 LFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIH 477
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
M +G+ + + ++ + L ++ +M ++ D V+W ++ S
Sbjct: 478 GLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFSG 529
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 138/600 (23%), Positives = 261/600 (43%), Gaps = 83/600 (13%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV-KLNETTFS 88
R G +V AR +F++MP R +V+W+TM+ + ++ESL + R+ NE S
Sbjct: 91 RAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILS 150
Query: 89 TILSVCAQLNSLIDGK----QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
+ + C+ L+ G+ Q+ ++KS ++ +VG+ L+ FY I+ A+ VFD
Sbjct: 151 SFIQACSGLDG--SGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDA 208
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
L E K V WT +ISG K + +L+L
Sbjct: 209 LPE-------------------------------KSTVTWTTMISGCVK-MGRSYVSLQL 236
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F + E G +P+ Y +V+ AC+ L GK +H +++ G E D S+ LI+ Y
Sbjct: 237 FYQLME-GNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYV 295
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE------------ 312
C A +++D + N + + +L++G ++A +F + +
Sbjct: 296 KCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSS 355
Query: 313 -------ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER---- 361
+++ + + + Y + + + + S+I + + E +
Sbjct: 356 ILTSCASLHALEFGTQVHAYTIKANLGNDSYV-----TNSLIDMYAKCDCLTEARKVFDI 410
Query: 362 ----NPVTWNSMISGY----VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
+ V +N+MI GY Q LH+ AL ++ MR I + TF L A + L S
Sbjct: 411 FAADDVVLFNAMIEGYSRLGTQWELHD-ALNIFHDMRFRLIRPSLLTFVSLLRASASLTS 469
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L + +H + K +++ G++L+ +YS C + D++ F + ++ W ++ +G
Sbjct: 470 LGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSG 529
Query: 474 YSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
Y EA+ LF E+ L +D P+ TFV +++A + G + + G+
Sbjct: 530 YVQQSENEEALNLFLELQLSRD-RPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLEC 588
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
++D+ + G +A + D D V W +++S+ + N G +A Q +
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAF-DSAASRDVVCWNSVISS---YANHGEGRKALQML 644
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 205/482 (42%), Gaps = 86/482 (17%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA---KFDESLSLVSTMHR 77
TN I + L AR +FD VV +N M+ GYS+ + ++L++ M
Sbjct: 388 TNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRF 447
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ + TF ++L A L SL KQIH L+ K G F GS L+ Y+NC+ +++
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKD 507
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
++ VFDE+ + ++W+ M GYVQ + +A ++F++
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLE---------------------- 545
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
L+L R + P+E+TF ++ A L + G+ H L+K G E + I
Sbjct: 546 ----LQLSR-------DRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITN 594
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL++ Y C G EDA F+ + +
Sbjct: 595 ALLDMYAKC-------------------------------GSPEDAHKAFDSAASRDVVC 623
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+NS+I YA +G+ + ++ EKM I E N +T+ ++S
Sbjct: 624 WNSVISSYANHGEGRKALQMLEKMMCEGI-------------EPNYITFVGVLSACSHAG 670
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
L E L+ + M + I+ + + G L + + L + K P + V
Sbjct: 671 LVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEAREL---IEKMPTKPAAIVWR 727
Query: 438 SLVDMYSRCGSINDAQ--ASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
SL+ ++ G++ A+ A + +S P + ++T L N Y+ G+ ++A + E M +
Sbjct: 728 SLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEG 787
Query: 495 IV 496
+V
Sbjct: 788 VV 789
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
R R F+ L + L ++H ++ + E + Y+ L+++YSR G + A+
Sbjct: 42 RGRREFARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKV 101
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGL 514
F + N+ W+ +++ +HHG E++++F + + PN + AC +GL
Sbjct: 102 FEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQAC--SGL 159
Query: 515 VNEGMKIFRSMKSYGVVPTLEH----YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
G + ++S+ V + T ++D + G++ A +P E V W
Sbjct: 160 DGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALP-EKSTVTWT 218
Query: 571 ALLSAC 576
++S C
Sbjct: 219 TMISGC 224
>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 225/690 (32%), Positives = 355/690 (51%), Gaps = 57/690 (8%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK-------WAKF 65
T T I N I++ RNG L A +F QM R++VSWN M+ Y++ W F
Sbjct: 45 TTSTAIFQCNSQISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVF 104
Query: 66 DESL--------SLVSTMHRSNVKL-------------NETTFSTILSVCAQLNSLIDGK 104
DE ++++ M ++ L N +++T+++ +
Sbjct: 105 DEMPVRATTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRF---D 161
Query: 105 QIHCLVLKSGYECFEFVGSGLLFF-YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
+ CL ++ + + V S +L Y + EA RVF+ + + +S M+ GY +
Sbjct: 162 EAECLYAETPVKFRDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKM 221
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+ DA +F +MP+++V+ WT +I GY K+ E LF MR+ G+ N T
Sbjct: 222 GRILDARSLFDRMPERNVITWTAMIDGYFKA-GFFEDGFGLFLRMRQEGDVRVNSNTLAV 280
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
+ RAC + EG +HGLL + EFD +G +LI Y A V+ ++
Sbjct: 281 MFRACRDFFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKD 340
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+ NSLI GL+ +I +A +F ++ + +S+ MIKG++ G++ LF MP
Sbjct: 341 SVSWNSLITGLVQREQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMP- 399
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
E++ +TW +MIS +V N +E+AL + M + + TFS
Sbjct: 400 ----------------EKDDITWTAMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSS 443
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ A + L L +G +H +VK +++ V SLV MY +CG+ NDA FS IS PN
Sbjct: 444 VLSATASLADLIEGLQIHGRVVKMNMANDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPN 503
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+ ++ +++G+S++G G EAV LF ++ PN TF+ +LSACV G V+ G K F+
Sbjct: 504 IVSYNTMISGFSYNGFGKEAVKLFSMLESTGKEPNGVTFLALLSACVHVGYVDLGWKYFK 563
Query: 524 SMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
SMK SYG+ P +HY C+VDL GRSG L EA I MP E + VWG+LLSA + +
Sbjct: 564 SMKFSYGIEPGPDHYACMVDLFGRSGLLDEAYNLISTMPCEPHSGVWGSLLSASKTHLRV 623
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGK---WGKKMDIRKRLTHLEVKKDPGCSW 639
++ E AA+K+ L+ + YV+LS +Y+++GK + M+I+K +KKDPG SW
Sbjct: 624 DLAELAAKKLIELEPDSATPYVVLSQLYSMVGKNSDCDRIMNIKK---SKRIKKDPGSSW 680
Query: 640 IELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
I L +VH F D ++ N I TL+ +
Sbjct: 681 IILKGQVHNFLAGDESHLNLEEIAFTLDMI 710
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 222/676 (32%), Positives = 347/676 (51%), Gaps = 90/676 (13%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A LFD+MP R VS+ T++ GYS+ +F E++ L S + +LN FST+L +
Sbjct: 95 LPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKL 154
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
G +H V K G++ FVG+ L+ Y+ C
Sbjct: 155 LVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVC--------------------- 193
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
GY +C A VF + KD+V WT +++ Y ++ + E++LKLF MR G
Sbjct: 194 -----GYAEC-----ARQVFDAIEYKDMVSWTGMVACYVEN-ECFEESLKLFSRMRIVGF 242
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
PN +TF SV++AC L F GK VHG K + + +G LI+ Y D A+
Sbjct: 243 K-PNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDAL 301
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT---------------------- 311
+V++ + + + +I + E+A +F R+
Sbjct: 302 QVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLV 361
Query: 312 -----------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
+ N N+++ YA G++++S +LF + P+ +
Sbjct: 362 DLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCT--------- 412
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
V+WN++I GYVQ EKAL L+ M + + T T+S + AC+ + +L
Sbjct: 413 --------DVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAAL 464
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ G +H+ VKT ++ N VG +L+DMY++CG+I DA+ F + + +W A+++GY
Sbjct: 465 EPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGY 524
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPT 533
S HGL EA+ FE MLE + P+ TFVG+LSAC AGL++ G F+SM + Y + P
Sbjct: 525 SVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPC 584
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
EHYTC+V LLGRSGHL +A + + ++P E +VW ALLSAC ++E+G +AQ++
Sbjct: 585 AEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVL 644
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
++ + + +V+LSNIYA +WG IR + ++K+PG SWIE RVH FSV D
Sbjct: 645 EIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGD 704
Query: 654 RNNPNCNVIYATLEHL 669
++P+ +I LE L
Sbjct: 705 TSHPDTKLINGMLEWL 720
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 242/531 (45%), Gaps = 64/531 (12%)
Query: 71 LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
L S+ + N + ++L C + GK +HC ++K G C + + +L +
Sbjct: 31 LAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKG-NCLDLFANNILLNF- 88
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
YV+ + + DA +F +MP ++ V + LI G
Sbjct: 89 -----------------------------YVKYDSLPDAAKLFDEMPDRNTVSFVTLIQG 119
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
Y++ + E A+ LF ++ G + N + F +V++ G VH + K GF+
Sbjct: 120 YSQCLRFSE-AIGLFSRLQGEGHEL-NPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFD 177
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
D +G ALI+ Y C + A +V+D +E + + ++ + E++ +F+R+
Sbjct: 178 SDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRM 237
Query: 311 T----EANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISL------- 349
+ N+ ++ S++K G AV+G + L E +I L
Sbjct: 238 RIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDV 297
Query: 350 NTMISVIPEMERNPV-TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
+ + V EM ++ V W+ MI+ Y Q+ E+A++++ MR+ + + T + L AC
Sbjct: 298 DDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQAC 357
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ L LQ G +H H+VK + NV+V +L+DMY++CG + ++ FS + +W
Sbjct: 358 ASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWN 417
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
++ GY G G +A++LF+ MLE + T+ VL AC + G +I S
Sbjct: 418 TVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQI----HSL 473
Query: 529 GVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
V + T V +D+ + G++ +A + DM E D V W A++S
Sbjct: 474 SVKTIYDKNTVVGNALIDMYAKCGNIKDA-RLVFDMLREHDQVSWNAMISG 523
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 191/426 (44%), Gaps = 86/426 (20%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++G + A +F++MP V+ W+ M+ Y++ + +E++ + M R V N+ T ++
Sbjct: 293 KSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLAS 352
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L CA L L G QIHC V+K G + FV + L+ YA C +E + ++F E
Sbjct: 353 LLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCT 412
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
++ W+ ++VGYVQ EKAL LF+ M
Sbjct: 413 DVSWNTVIVGYVQAG--------------------------------NGEKALILFKDML 440
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E + E T+ SV+RACA + A G +H L +K ++ + +G ALI+ Y C
Sbjct: 441 EC-QVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKC--- 496
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
G I+DA L+F+ L E + +S+N+MI GY+V+G
Sbjct: 497 ----------------------------GNIKDARLVFDMLREHDQVSWNAMISGYSVHG 528
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
++ + FE M L T E + + VT+ ++S L ++ + +M
Sbjct: 529 LYGEALKTFESM-------LET------ECKPDKVTFVGILSACSNAGLLDRGQAYFKSM 575
Query: 390 -RKLAIDRTRSTFSVLFHACSCLGSLQQ-GQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
+ I+ ++ + G L + +L+H + PFE +V V +L+ S C
Sbjct: 576 VEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVH----EIPFEPSVMVWRALL---SACV 628
Query: 448 SINDAQ 453
ND +
Sbjct: 629 IHNDVE 634
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 7/169 (4%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
+CGR + + LF + P T VSWNT++ GY + +++L L M V+ E
Sbjct: 393 AKCGR---MENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEV 449
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T+S++L CA + +L G QIH L +K+ Y+ VG+ L+ YA C I++A+ VFD L
Sbjct: 450 TYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDML 509
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISG 190
E +++ W+ M+ GY L +A F M K D V + ++S
Sbjct: 510 REHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSA 558
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
++++ +T+ + T++ N I + G + AR +FD + VSWN M+ GYS
Sbjct: 469 QIHSLSVKTIYDKNTVV--GNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSV 526
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
+ E+L +M + K ++ TF ILS C+ L G+
Sbjct: 527 HGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQ 569
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 216/683 (31%), Positives = 350/683 (51%), Gaps = 90/683 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E ++ +NKAIT R G++ A LF MP R+ ++N ML GYS + L L ++
Sbjct: 35 EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSA----NGRLPLAAS 90
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQI---------------------HCLV-LK 112
+ R+ + + +++T+L A +SL D + + H LV L
Sbjct: 91 LFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLA 150
Query: 113 SGY-----ECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
Y E +G+L Y +EEA+ +F+ E + + W+ ++ GYVQ MS
Sbjct: 151 RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMS 210
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
+A ++F +MP +DVV W ++SGYA+ D E A +LF + + +T+ +V+
Sbjct: 211 EARELFDRMPGRDVVSWNIMVSGYARRGDMVE-ARRLF-----DAAPVRDVFTWTAVVSG 264
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
A+ G E + RV+D + +
Sbjct: 265 YAQNGMLEEAR-----------------------------------RVFDAMPERNAVSW 289
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N+++ I +++A+ +FN + N S+N+M+ GYA G ++++K +F+ MP
Sbjct: 290 NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP----- 344
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
+++ V+W +M++ Y Q E+ LQL++ M + RS F+ +
Sbjct: 345 ------------QKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLST 392
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ + +L+ G LH L++ + +VG +L+ MY +CG++ DA+ +F + +V +W
Sbjct: 393 CADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSW 452
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
++ GY+ HG G EA+ +F++M P+ T VGVL+AC +GLV +G+ F SM
Sbjct: 453 NTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHH 512
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+GV EHYTC++DLLGR+G L EA + +KDMP E D+ +WGALL A N E+G
Sbjct: 513 DFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGR 572
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
AA+K+F L+ + YV+LSNIYA GKW +R + VKK PG SWIE+ ++V
Sbjct: 573 SAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKV 632
Query: 647 HAFSVEDRNNPNCNVIYATLEHL 669
H FS D +P IYA LE L
Sbjct: 633 HTFSAGDCVHPEKEKIYAFLEDL 655
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 205/662 (30%), Positives = 349/662 (52%), Gaps = 56/662 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD+M ++VVSW ++ GY+ + + + M + V N T+ +L
Sbjct: 293 GSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVL 352
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ + +L GK +H +L +G+E VG+ L+ YA C ++ ++
Sbjct: 353 NAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQ----------- 401
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
VF K+ +D++ W +I G A+ + E+A +++ M+
Sbjct: 402 --------------------VFEKLVNRDLIAWNTMIGGLAEGGN-WEEASEIYHQMQRE 440
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G MPN+ T+ ++ AC A G+ +H ++K GF FD S+ ALI Y C +
Sbjct: 441 GM-MPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKD 499
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAV 327
A +++++ + + ++I GL G +A +F + +A N ++Y S++ +
Sbjct: 500 ARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSS 559
Query: 328 YGQVDDSKRLFEKMPHRSIIS----LNTMIS-------------VIPEM-ERNPVTWNSM 369
+D +R+ +++ + + NT+++ V M +R+ V +N+M
Sbjct: 560 PAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAM 619
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
I GY +NL ++AL+L+ +++ + + T+ + +AC+ GSL+ + +H+ ++K +
Sbjct: 620 IGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGY 679
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
S+ +G +LV Y++CGS +DA F + NV +W A++ G + HG G + + LFE
Sbjct: 680 LSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFER 739
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSG 548
M + I P+ TFV +LSAC AGL+ EG + F SM + +G+ PT+EHY C+VDLLGR+G
Sbjct: 740 MKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAG 799
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L E E IK MP + + +WGALL AC N+ V ERAA+ LD + YV LS+
Sbjct: 800 QLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSH 859
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YA G W +RK + V K+PG SWIE+ ++H F EDR++P IYA L+
Sbjct: 860 MYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDK 919
Query: 669 LT 670
LT
Sbjct: 920 LT 921
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 157/611 (25%), Positives = 286/611 (46%), Gaps = 96/611 (15%)
Query: 7 QSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQM--PIRTVVSWNTMLCGYSKWAK 64
Q T++ Q T+ N I +CG + AR +++++ RTV SWN M+ GY ++
Sbjct: 169 QHCTVLDQYTVNALINMYI-QCG---SIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGY 224
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
+E+L L+ M + + L T +LS C ++L G++IH +K+ V +
Sbjct: 225 IEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANC 284
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
+L YA C I EA+ VFD++ + + W++++ GY C AF++F KM ++ VV
Sbjct: 285 ILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVV-- 342
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
PN T+ +V+ A + A GK VH +
Sbjct: 343 -------------------------------PNRITYINVLNAFSGPAALKWGKTVHSHI 371
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
+ G E D ++G AL++ Y C ++ +V+++L N L A N++I GL G E+A
Sbjct: 372 LNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEAS 431
Query: 305 LIFNRLTE----ANSISY-----------------------------------NSMIKGY 325
I++++ N I+Y N++I Y
Sbjct: 432 EIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMY 491
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
A G + D++ LF KM + IIS W +MI G ++ L +AL +
Sbjct: 492 ARCGSIKDARLLFNKMVRKDIIS-----------------WTAMIGGLAKSGLGAEALAV 534
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ M++ + R T++ + +ACS +L G+ +H +++ ++ +V +LV+MYS
Sbjct: 535 FQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSM 594
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CGS+ DA+ F ++ ++ A+ A++ GY+ H LG EA+ LF+ + E+ + P+ T++ +
Sbjct: 595 CGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINM 654
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
L+AC +G + +I + G + +V + G +A + D ++ +
Sbjct: 655 LNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDA-LLVFDKMMKRN 713
Query: 566 AVVWGALLSAC 576
+ W A++ C
Sbjct: 714 VISWNAIIGGC 724
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/551 (22%), Positives = 248/551 (45%), Gaps = 92/551 (16%)
Query: 66 DESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
D ++ +V + + ++N + +L C ++ L+ G+++H +++ ++ + L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELL--WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
+ Y C IEEA++V+++L+ + W+ M+VGYVQ
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQ--------------------- 221
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
GY E+ALKL R M++ G + T ++ +C A G+ +H
Sbjct: 222 -----YGY------IEEALKLLREMQQHGLALGRATTM-RLLSSCKSPSALECGREIHVE 269
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA 303
+K FD ++ ++ Y C + A V+D++E + + +I G G E A
Sbjct: 270 AMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIA 329
Query: 304 ELIFNRLTE----ANSISY-----------------------------------NSMIKG 324
IF ++ + N I+Y +++K
Sbjct: 330 FEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKM 389
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
YA G D +++FEK+ +R +I+ WN+MI G + E+A +
Sbjct: 390 YAKCGSYKDCRQVFEKLVNRDLIA-----------------WNTMIGGLAEGGNWEEASE 432
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
+Y M++ + + T+ +L +AC +L G+ +H+ +VK F ++ V +L+ MY+
Sbjct: 433 IYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYA 492
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
RCGSI DA+ F+ + ++ +WTA++ G + GLG+EA+ +F+ M + + PN T+
Sbjct: 493 RCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTS 552
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
+L+AC ++ G +I + + G+ +V++ G + +A + M +
Sbjct: 553 ILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRM-TQR 611
Query: 565 DAVVWGALLSA 575
D V + A++
Sbjct: 612 DIVAYNAMIGG 622
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 220/484 (45%), Gaps = 86/484 (17%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I N I+ R G + AR LF++M + ++SW M+ G +K E+L++ M +
Sbjct: 481 ISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQ 540
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ +K N T+++IL+ C+ +L G++IH V+++G V + L+ Y+ C +++
Sbjct: 541 AGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKD 600
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++VFD + + + + ++ M+ GY NL
Sbjct: 601 ARQVFDRMTQRDIVAYNAMIGGYAAHNL-------------------------------- 628
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
++ALKLF ++E G P++ T+ +++ ACA G+ K +H L++K G+ D S+G
Sbjct: 629 GKEALKLFDRLQEEGLK-PDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGN 687
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL+ Y C +F A+ V+D++ + + N++I G GR
Sbjct: 688 ALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGR------------------ 729
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
GQ D +LFE+M M + P++ VT+ S++S
Sbjct: 730 -----------GQ--DVLQLFERMK---------MEGIKPDI----VTFVSLLSACSHAG 763
Query: 378 LHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYV 435
L E+ + + +M R I T + + G L + + L+KT PF++N +
Sbjct: 764 LLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEA----LIKTMPFQANTRI 819
Query: 436 GTSLVDMYSRCGSINDAQASFSS---ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
+L+ G++ A+ + S + N A + AL + Y+ G+ A L ++M +
Sbjct: 820 WGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQ 879
Query: 493 QDIV 496
+ +
Sbjct: 880 RGVT 883
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 152/324 (46%), Gaps = 21/324 (6%)
Query: 304 ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP 363
E I T + + N++I Y G ++++++++ K+ H ER
Sbjct: 165 EHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNH---------------TERTV 209
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
+WN+M+ GYVQ E+AL+L M++ + R+T L +C +L+ G+ +H
Sbjct: 210 HSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVE 269
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
+K +V V +++MY++CGSI++A+ F + + +V +WT ++ GY+ G A
Sbjct: 270 AMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIA 329
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
+F+ M ++ +VPN T++ VL+A + G + + + G L T +V +
Sbjct: 330 FEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKM 389
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF--GLDKKPIS 601
+ G + + + + + D + W ++ N E +M G+ I+
Sbjct: 390 YAKCGSYKDCRQVFEKL-VNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKIT 448
Query: 602 AYVILSN--IYAVLGKWGKKMDIR 623
YVIL N + WG+++ R
Sbjct: 449 -YVILLNACVNPTALHWGREIHSR 471
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 219/664 (32%), Positives = 338/664 (50%), Gaps = 61/664 (9%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I + G + AR +FDQM + VSW TM+ GY+ F E L L M NV
Sbjct: 266 SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV 325
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
++N+ + + A+ L GK+IH L+ + V + L+ YA C E E+AK+
Sbjct: 326 RINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQ 385
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+F L + + WS ++ VQ +GY E+
Sbjct: 386 LFWGLQGRDLVAWSAIIAALVQ--------------------------TGYP------EE 413
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL LF+ M ++ + PN T S++ ACA L GK +H +K + D S G AL+
Sbjct: 414 ALSLFQEM-QNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALV 472
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN--RLTEANSIS- 317
Y C F A+ ++R+ + + NSLING +G +A +F RL+ N +
Sbjct: 473 SMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAG 532
Query: 318 -----------YNSMIKGYAVYGQVDDSKRLFEKMPH--RSIISLNTMISVIPEME---- 360
N + +G ++G + K FE H ++I + +P E
Sbjct: 533 TMVGVVPACALLNDLDQGTCIHGLI--VKLGFESDCHVKNALIDMYAKCGSLPSAEFLFN 590
Query: 361 -----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ VTWN +I+ Y+QN ++A+ + MR TF + A + L + +
Sbjct: 591 KTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFR 650
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+G HA +++ F SN VG SL+DMY++CG + ++ F+ + + +W A+++GY+
Sbjct: 651 EGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYA 710
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTL 534
HG G A+ LF +M E + ++ +FV VLSAC GLV EG KIF SM Y + P L
Sbjct: 711 VHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDL 770
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY C+VDLLGR+G E FIK MP+E DA VWGALL +C N+++GE A +
Sbjct: 771 EHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVK 830
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
L+ + + +V+LS+IYA G+W R ++ L +KK PGCSW+EL ++VHAF V D+
Sbjct: 831 LEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDK 890
Query: 655 NNPN 658
++P
Sbjct: 891 SHPQ 894
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/561 (24%), Positives = 259/561 (46%), Gaps = 57/561 (10%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR++FD P + + WN+M+ Y++ +++E+L + M ++ ++ TF+ +L C
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+L +G H + + G E F+G+GL+ Y+ +++ A+ VFD
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFD------------- 188
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
KMPK+DVV W +I+G ++S D CE A+ FR M+ G P
Sbjct: 189 ------------------KMPKRDVVAWNAMIAGLSQSEDPCE-AVDFFRSMQLVGVE-P 228
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ + ++ +L + +HG + + +F ++ LI+ Y C D A RV+
Sbjct: 229 SSVSLLNLFPGICKLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVF 286
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN-SISYNSMIKGYAVYGQVDDSK 335
D++ + + +++ G G + +F+++ N I+ S + + + D +
Sbjct: 287 DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLE 346
Query: 336 R--------LFEKMPHRSIIS--LNTMISVIPEME-----------RNPVTWNSMISGYV 374
+ L +++ +++ L M + E E R+ V W+++I+ V
Sbjct: 347 KGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALV 406
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
Q E+AL L+ M+ + R T + AC+ L L+ G+ +H VK +S++
Sbjct: 407 QTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLS 466
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
GT+LV MY++CG A +F+ +SS ++ W +L+NGY+ G A+ +F +
Sbjct: 467 TGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSA 526
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
I P+A T VGV+ AC +++G I + G ++D+ + G L AE
Sbjct: 527 INPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAE 586
Query: 555 EFIKDMPIELDAVVWGALLSA 575
D V W +++A
Sbjct: 587 FLFNKTDFTKDEVTWNVIIAA 607
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 129/539 (23%), Positives = 222/539 (41%), Gaps = 100/539 (18%)
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S+ N + +LS C LN L+ QIH ++ SG
Sbjct: 26 SSTYTNYLHYPRLLSSCKHLNPLL---QIHAQIIVSG----------------------- 59
Query: 138 AKRVFDELHEDNEL--LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
F H L L+SL + +C+L FD P ++W +I Y +S
Sbjct: 60 ----FKHHHSITHLINLYSL----FHKCDLARSVFD---STPNPSRILWNSMIRAYTRSK 108
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
E AL+++ M E G P++YTF V++AC EG HG + + G E D I
Sbjct: 109 QYNE-ALEMYYCMVEKGLE-PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFI 166
Query: 256 GGALIEFYCGCEAFDGAMRVYDRL------------------ENPC-------------- 283
G L++ Y A V+D++ E+PC
Sbjct: 167 GAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGV 226
Query: 284 LNASNSLINGLISMGRIEDAEL-------IFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
+S SL+N + ++ + EL +F R + +S N +I Y+ G VD ++R
Sbjct: 227 EPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARR 284
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F++M ++++ V+W +M++GY N + L+L+ M+ +
Sbjct: 285 VFDQM-----------------VDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRI 327
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ + F A + L++G+ +H ++ +S++ V T L+ MY++CG A+ F
Sbjct: 328 NKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLF 387
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+ ++ AW+A++ G EA+ LF+ M Q + PN T + +L AC L+
Sbjct: 388 WGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLK 447
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G I + L T +V + + G A M D V W +L++
Sbjct: 448 LGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLING 505
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 209/500 (41%), Gaps = 94/500 (18%)
Query: 19 VSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ST A+ + G A F++M R +V+WN+++ GY++ ++ + +
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S + + T ++ CA LN L G IH L++K G+E V + L+ YA C +
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPS 584
Query: 138 AKRVFDELH-EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+ +F++ +E+ W++++ Y+Q +G+AK
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQ--------------------------NGHAK--- 615
Query: 197 GCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+A+ F MR EN PN TF SV+ A A L AF EG H +I+ GF + +
Sbjct: 616 ---EAISSFHQMRL--ENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLV 670
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
G +LI+ Y C G++ +E +FN + ++
Sbjct: 671 GNSLIDMYAKC-------------------------------GQLXYSEKLFNEMDHKDT 699
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI-ISLNTMISVIPE------MERNPVTWNS 368
+S+N+M+ GYAV+G D + LF M + I + +SV+ +E ++S
Sbjct: 700 VSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHS 759
Query: 369 MISGY-VQNNLHEKALQLYMTMRKLAIDRTRSTFSV------------LFHACSCLGSLQ 415
M Y ++ +L A + + R D T V L +C +++
Sbjct: 760 MSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVK 819
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA-----AWTAL 470
G++ HLVK + + L +Y++ G DA + S ++ + +W L
Sbjct: 820 LGEVALDHLVKLEPRNPAHF-VVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVEL 878
Query: 471 MNGYSHHGLGSEAVLLFEIM 490
N +G ++ E M
Sbjct: 879 KNKVHAFRVGDKSHPQLESM 898
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 168/425 (39%), Gaps = 88/425 (20%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPI-RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N I + G L +A LF++ + V+WN ++ Y + E++S M N
Sbjct: 570 NALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENF 629
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
N TF ++L A L + +G H +++ G+ VG+ L+ YA C ++ +++
Sbjct: 630 HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEK 689
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+F+E+ + + W+ ML GY + G+ ++
Sbjct: 690 LFNEMDHKDTVSWNAMLSGYA--------------------------VHGHG------DR 717
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIGGAL 259
A+ LF M+ES + + +F SV+ AC G EG K+ H + K + D +
Sbjct: 718 AIALFSLMQESQVQI-DSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACM 776
Query: 260 IEFYCGCEAFDGAM------------RVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
++ FD + V+ L C SN + +G + L+
Sbjct: 777 VDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSN------VKLGEVALDHLV- 829
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM--------PHRSIISLNTMISVI--- 356
+L N + + YA G+ D+ + KM P S + L +
Sbjct: 830 -KLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVG 888
Query: 357 ----PEMERNPVTWNSMIS-----GYVQN------NLHE--KALQLYMTMRKLAIDRTRS 399
P++E + WN+++ GYV + N+ E K + LY +LAI
Sbjct: 889 DKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAI----- 943
Query: 400 TFSVL 404
TF++L
Sbjct: 944 TFALL 948
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 203/622 (32%), Positives = 334/622 (53%), Gaps = 55/622 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G+L LF++M R V+SWNTM+ Y + E+L L M S V +E T +++
Sbjct: 182 GKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLV 241
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED--N 149
S CA+L L GK++H ++ + + + L+ Y+ C +++EA + E +
Sbjct: 242 STCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVD 301
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+LW+ ++ GYV+ N + A +F KM ++ +V WT ++SGY + CE +L+LF+ MR
Sbjct: 302 VVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCE-SLELFQQMR 360
Query: 210 ESGEN-MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
EN +P+E +V+ AC L F G+ VH ++ G D +G AL++ Y C
Sbjct: 361 --FENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGK 418
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
D A+R +++L PC +A+ S+NSM+ G+
Sbjct: 419 LDEALRTFEQL--PCKSAA-----------------------------SWNSMLDGFCRS 447
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G VD ++ F K+P + I+S WN+M++ YV+++L ++ +++
Sbjct: 448 GGVDKARDFFNKIPEKDIVS-----------------WNTMVNAYVKHDLFNESFEIFCK 490
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M+ + ++T L +C+ +G+L G ++ ++ K + +GT+L+DMY +CG
Sbjct: 491 MQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGC 550
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+ A F+ I NV WTA+M Y+ G EA+ L+ M E+ + P+ TF+ +L+A
Sbjct: 551 VEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAA 610
Query: 509 CVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C GLV+EG K F ++S Y ++PT+ HY C+VDLLGR GHL E +FI+ MPIE D
Sbjct: 611 CSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVS 670
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
+W +L+ AC N+E+ E+A +++ +D A+V+LSNIYA G+W +R +L
Sbjct: 671 IWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLH 730
Query: 628 HLEVKKDPGCSWIELNSRVHAF 649
V K PG + IE N VH F
Sbjct: 731 ETGVPKQPGFTMIEQNGVVHEF 752
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 128/504 (25%), Positives = 226/504 (44%), Gaps = 75/504 (14%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++ ++ AR LFD+M R++VSW TM+ GY + + ESL L M NV +E T
Sbjct: 314 KSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVT 373
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C L G+ +H ++ G F+G+ LL YA C +++EA R F++L +
Sbjct: 374 VLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKS 433
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
W+ ML G+ + + A D F K+P+KD+V W +++ Y K D ++ ++F M+
Sbjct: 434 AASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKH-DLFNESFEIFCKMQ 492
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY--CGCE 267
S P++ T S++ +CA++GA G V+ + K D +G ALI+ Y CGC
Sbjct: 493 SSNVK-PDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGC- 550
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAV 327
+E A IF ++ E N + +M+ YA+
Sbjct: 551 --------------------------------VEMAYEIFTQIIEKNVFVWTAMMAAYAM 578
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
GQ ++ L+ +M R + + + VT+ ++++ L ++ + +
Sbjct: 579 EGQALEAIDLYLEMEERGV-------------KPDHVTFIALLAACSHGGLVDEGYKYF- 624
Query: 388 TMRKLAIDRTRSTFSVL--FHACSCLGSLQQGQLLHAH-----LVKTPFESNVYVGTSLV 440
++ RS ++++ H C+ L G++ H + + P E +V + +SL+
Sbjct: 625 -------NKLRSFYNIIPTIHHYGCMVDL-LGRVGHLEETVKFIERMPIEPDVSIWSSLM 676
Query: 441 DMYSRCGSINDAQASFSS---ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
++ A+ +F I N A L N Y+ G + V L + VP
Sbjct: 677 RACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDD-VSKVRTKLHETGVP 735
Query: 498 NAATFV-----GVLSACVRAGLVN 516
F GV+ V + LV+
Sbjct: 736 KQPGFTMIEQNGVVHEFVASNLVS 759
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 202/457 (44%), Gaps = 60/457 (13%)
Query: 182 VVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
++W L+ K +GC ++ L+ + M G + + TF +I AC + G V
Sbjct: 99 IIWNTLLENKLK--EGCPQEVLECYYHMVTQGV-LLDISTFHFLIHACCKNFDVKLGSEV 155
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
HG ++KCGF ++S+ L+ Y C G++
Sbjct: 156 HGRILKCGFGRNKSLNNNLMGLYSKC-------------------------------GKL 184
Query: 301 EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
++ +F ++T + IS+N+MI Y + G ++ LF++M ++S V+P+
Sbjct: 185 KEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEM----LVS-----GVLPD-- 233
Query: 361 RNPVTWNSMISGYVQNNLHE--KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+T S++S + E K L LY+ KL I S + L S G + +
Sbjct: 234 --EITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWI--RGSLLNCLVDMYSKCGKMDEAH 289
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
L + ++ E +V + T+LV Y + I+ A+ F ++ ++ +WT +M+GY G
Sbjct: 290 GLLSRCDES--EVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGG 347
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
E++ LF+ M ++++P+ V VLSACV + G + + +YG++
Sbjct: 348 YYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGN 407
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG-LDK 597
++DL + G L EA + +P + A W ++L G A+ F + +
Sbjct: 408 ALLDLYAKCGKLDEALRTFEQLPCK-SAASWNSMLDG----FCRSGGVDKARDFFNKIPE 462
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
K I ++ + N Y + + +I ++ VK D
Sbjct: 463 KDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPD 499
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/543 (18%), Positives = 217/543 (39%), Gaps = 124/543 (22%)
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
+ S +L F + ++ A ++ HE ++W+ +L ++ + + + M +
Sbjct: 69 ITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQG 128
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
V++ + TF +I AC + G V
Sbjct: 129 VLL---------------------------------DISTFHFLIHACCKNFDVKLGSEV 155
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
HG ++KCGF ++S+ L+ Y C ++++++ + + + N++I+ + G
Sbjct: 156 HGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMY 215
Query: 301 EDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+A +F+ + + + I+ S++ A ++ KRL + + ++++ +
Sbjct: 216 REALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCL 275
Query: 357 PEM--------------------ERNPVTWNSMISGYVQNNLHEKA-------------- 382
+M E + V W +++SGYV++N +KA
Sbjct: 276 VDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVS 335
Query: 383 -----------------LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
L+L+ MR + + AC L G+ +HA +V
Sbjct: 336 WTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIV 395
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ ++G +L+D+Y++CG +++A +F + + A+W ++++G+ G +A
Sbjct: 396 TYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARD 455
Query: 486 LFEIMLEQDIV-------------------------------PNAATFVGVLSACVRAGL 514
F + E+DIV P+ T + +LS+C + G
Sbjct: 456 FFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGA 515
Query: 515 VNEGM--KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+N G+ ++ G+ L T ++D+ G+ G + A E + IE + VW A+
Sbjct: 516 LNHGIWVNVYIEKNEIGIDAMLG--TALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAM 572
Query: 573 LSA 575
++A
Sbjct: 573 MAA 575
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 139/304 (45%), Gaps = 15/304 (4%)
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
E + WN+++ ++ ++ L+ Y M + STF L HAC ++ G
Sbjct: 95 EPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSE 154
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+H ++K F N + +L+ +YS+CG + + F ++ +V +W +++ Y G+
Sbjct: 155 VHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGM 214
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
EA+ LF+ ML ++P+ T V ++S C + + G ++ + + C
Sbjct: 215 YREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNC 274
Query: 540 VVDLLGRSGHLHEAEEFIKDM-PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
+VD+ + G + EA + E+D V+W L+S ++ ++A Q ++++
Sbjct: 275 LVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSG---YVKSNKIDKARQLFDKMNER 331
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD--------PGCSWIE---LNSRVH 647
+ ++ + + Y G + + +++ +++ V D C +E L VH
Sbjct: 332 SLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVH 391
Query: 648 AFSV 651
AF V
Sbjct: 392 AFIV 395
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 225/749 (30%), Positives = 368/749 (49%), Gaps = 94/749 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIR-TVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
IVS N + C G++ A+ +F+ MP VVSWN+++ GY + +S+++ M
Sbjct: 90 IVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMR 149
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
V + TT + L +C+ L + G QIH + ++ G++ GS L+ YA C +E
Sbjct: 150 DLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLE 209
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----------------- 179
++ VF EL + N + WS + G VQ + + +F +M +K
Sbjct: 210 DSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCA 269
Query: 180 ----------------------DVVVWTKLISGYAKSVDGCEKALKLFRWM--------- 208
DV+V T + YAK D A KLF +
Sbjct: 270 GLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAK-CDNMSDAYKLFSLLPDHNLQSYN 328
Query: 209 --------RESG--------ENMPNEYTFDSV-----IRACARLGAFCEGKVVHGLLIKC 247
E G + N ++FD V + A A + EG +HGL IK
Sbjct: 329 AMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKS 388
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL---ISMGR-IEDA 303
+ + A+++ Y C A A ++D +E + N++I S G+ +
Sbjct: 389 NLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHF 448
Query: 304 ELIFNRLTEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+ E + +Y S++K G V+G++ S + +++ + +
Sbjct: 449 GAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKC 508
Query: 354 SVIPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
++ E E+ V+WN++ISG+ E + + + M ++ ++ T++ +
Sbjct: 509 GMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVL 568
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
C+ L ++ G+ +HA ++K S+VY+ ++LVDMYS+CG+++D+ F +
Sbjct: 569 DTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSV 628
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
W A++ G+++HGLG EA+ LFE ML ++I PN ATFV VL AC G +G+ F+ M
Sbjct: 629 TWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKM 688
Query: 526 KS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
S Y + P LEHY+C+VD+LGRSG + EA I+DMP E DA++W LLS C N+EV
Sbjct: 689 ASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEV 748
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
E+AA + LD + SAY +LSNIYA G W + IR+ + +KK+PGCSWIE+
Sbjct: 749 AEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKD 808
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANL 673
VH F V D+ +P C +IY+ L+ L ++
Sbjct: 809 EVHTFLVCDKAHPKCEMIYSLLDLLICDM 837
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 137/590 (23%), Positives = 257/590 (43%), Gaps = 61/590 (10%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TFS I C+ +L GK+ H ++ SG+ FV + L+ Y C +E A +VF+E+
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK-DVVVWTKLISGYAKSVDGCEKALKL 204
+ + + W+ M+ G M A VF MP DVV W LISGY ++ D +K++ +
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGD-IQKSIAV 144
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F MR+ G M + T ++ C+ L G +HG+ ++ GF++D G AL++ Y
Sbjct: 145 FLKMRDLGV-MFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYA 203
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNS 320
C + + ++ V+ L + + ++ I G + ++ +F + + +Y S
Sbjct: 204 KCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYAS 263
Query: 321 MIKGYA--------------------------------VYGQVD---DSKRLFEKMPHRS 345
+ + A +Y + D D+ +LF +P
Sbjct: 264 VFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLP--- 320
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
+ N ++N+MI GY +N +A +L++ ++K + + S
Sbjct: 321 --------------DHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGAL 366
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
A + + +G LH +K+ SN+ V +++DMY +CG++ +A F + +
Sbjct: 367 SAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPV 426
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
+W A++ + + + F ML + P+ T+ VL AC + GM++ +
Sbjct: 427 SWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRI 486
Query: 526 KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
G+ + + +VD+ + G + EAE+ + E V W A++S E
Sbjct: 487 IKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLE-EQTMVSWNAIISGFSLQKKSEDS 545
Query: 586 ERAAQKMFGLDKKPIS-AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
+R M + +P + Y + + A L G I ++ LE+ D
Sbjct: 546 QRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSD 595
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
R TFS +F CS +L+ G+ HAH++ + F V+V L+ MY +C ++ A F
Sbjct: 24 RKTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFE 83
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVN 516
+ ++ +W ++ G + G A +F M D+V ++ ++S ++ G +
Sbjct: 84 EMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVV----SWNSLISGYLQNGDIQ 139
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDL 543
+ + +F M+ GV+ +H T V L
Sbjct: 140 KSIAVFLKMRDLGVM--FDHTTLAVSL 164
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 234/786 (29%), Positives = 369/786 (46%), Gaps = 131/786 (16%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
++++AT + + LI N I +NG + AR +F ++ R VSW ML GY+
Sbjct: 63 LEIHATSVVRGLGADRLI--GNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYA 120
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ E+ L S MH + V S++LS C + G+ IH V K + F
Sbjct: 121 QRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180
Query: 121 VGSGLLFFY-------------------------------ANCFEIEEAKRVFDE----- 144
VG+ L+ Y A C E A ++FDE
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSG 240
Query: 145 --------------------LHEDNELLWSLMLVG--------------YVQCNLMSDAF 170
L + +L L+ G YV+C + A
Sbjct: 241 LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAH 300
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACAR 230
D+F + +VV+W ++ Y + D K+ ++F M+ +G + PN++T+ ++R C
Sbjct: 301 DIFNLGDRTNVVLWNLMLVAYGQISD-LAKSFEIFGQMQATGIH-PNKFTYPCILRTCTC 358
Query: 231 LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSL 290
G G+ +H L IK GFE D + G LI+ Y D A ++ + LE + + S+
Sbjct: 359 TGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSM 418
Query: 291 INGLISMGRIEDAELIFNRLTE-------------------------------------- 312
I G + E+A F + +
Sbjct: 419 IAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY 478
Query: 313 ANSIS-YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
A IS +N+++ YA G+ +++ LF ++ H+ + +TWN +IS
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREIDHK-----------------DEITWNGLIS 521
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
G+ Q+ L+E+AL ++M M + TF A + L ++QG+ +H VKT S
Sbjct: 522 GFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTS 581
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
V +L+ +Y +CGSI DA+ FS +S N +W ++ S HG G EA+ LF+ M
Sbjct: 582 ETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMK 641
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHL 550
++ + PN TF+GVL+AC GLV EG+ F+SM + YG+ P +HY CVVD+LGR+G L
Sbjct: 642 QEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQL 701
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
A F+ +MPI +A++W LLSAC N+E+GE AA+ + L+ ++YV+LSN Y
Sbjct: 702 DRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAY 761
Query: 611 AVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
AV GKW + +RK + ++K+PG SWIE+ + VHAF V DR +P + IY L L
Sbjct: 762 AVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELN 821
Query: 671 ANLNSV 676
L+ +
Sbjct: 822 DRLSKI 827
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/536 (24%), Positives = 226/536 (42%), Gaps = 69/536 (12%)
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVC-AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLF 127
LSLV+ + L + L C + N +IH + G +G+ L+
Sbjct: 27 LSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLID 86
Query: 128 FYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKL 187
YA + +A++VF EL + + W ML GY Q L +AF ++ +M WT +
Sbjct: 87 LYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMH------WTAV 140
Query: 188 ISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
I P Y SV+ AC + F +G+++H + K
Sbjct: 141 I---------------------------PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQ 173
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVY------DRLENPCLNASNSLINGLISMGRIE 301
F + +G ALI Y G +F A RV+ DR+ N+LI+G G E
Sbjct: 174 AFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRV------TFNTLISGHAQCGHGE 227
Query: 302 DAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRL----------FEKMPHRSII 347
A IF+ + + ++ S++ A G + K+L F+ + S++
Sbjct: 228 CALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLL 287
Query: 348 SLNTMISVIPEM--------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
L I N V WN M+ Y Q + K+ +++ M+ I +
Sbjct: 288 DLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKF 347
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T+ + C+C G ++ G+ +H+ +K FES++YV L+DMYS+ ++ A+ +
Sbjct: 348 TYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEML 407
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+V +WT+++ GY H EA+ F+ M + + P+ SAC + +G+
Sbjct: 408 EKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGL 467
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+I + G + + +V+L R G EA +++ + D + W L+S
Sbjct: 468 QIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHK-DEITWNGLISG 522
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 199/642 (30%), Positives = 336/642 (52%), Gaps = 84/642 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-VKLNETTFSTI 90
G + A +F + R VS+N +L GY + K +E+L L M + ++ ++ TF+T+
Sbjct: 426 GMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTL 485
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L++CA + G+QIH ++++ V + L+ Y+ C + AK +F+
Sbjct: 486 LTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFN------- 538
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+M +++ W +I GY ++ + ++AL+LF+ M+
Sbjct: 539 ------------------------RMAERNAYSWNSMIEGYQQNGE-TQEALRLFKQMQL 573
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+G P+ ++ S++ +C L +G+ +H +++ E + + L++ Y C + D
Sbjct: 574 NGIK-PDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMD 632
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
A +VYD+ + + I N M+ + G+
Sbjct: 633 YAWKVYDQT-------------------------------IKKDVILNNVMVSAFVNSGR 661
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+D+K LF++M +RN WNS+++GY L +++ ++ M
Sbjct: 662 ANDAKNLFDQME-----------------QRNTALWNSILAGYANKGLKKESFNHFLEML 704
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGSI 449
+ I+ T + + CS L +L+ G LH+ ++K F +V + T+LVDMYS+CG+I
Sbjct: 705 ESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAI 764
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
A+ F +++ N+ +W A+++GYS HG EA++L+E M ++ + PN TF+ +LSAC
Sbjct: 765 TKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSAC 824
Query: 510 VRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
GLV EG++IF SM+ Y + EHYTC+VDLLGR+G L +A+EF++ MPIE +
Sbjct: 825 SHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVST 884
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
WGALL AC +M++G AAQ++F LD + YVI+SNIYA G+W + DIR+ +
Sbjct: 885 WGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKM 944
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
VKKDPG SWIE+NS + F + +P IY L HLT
Sbjct: 945 KGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLT 986
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 155/569 (27%), Positives = 268/569 (47%), Gaps = 65/569 (11%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L AR LF++MP R + +WNTM+ Y++ + E L L M S ++ TF +++
Sbjct: 125 LCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKA 184
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
C + + +Q+ V+K+G C FVG L+
Sbjct: 185 CIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALV--------------------------- 217
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
GY + M DA ++ VV W +I+GY K + E+A +F M + G
Sbjct: 218 ----DGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVK-ILSWEEAWGIFDRMLKIGV 272
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+ +TF S +R C L + GK VH LI CGF+ D +G ALI+ Y C+ + +
Sbjct: 273 -CPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCL 331
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYG 329
+V+D + NS+I+ G DA ++F R+ E +N + S++ A
Sbjct: 332 KVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLA 391
Query: 330 QVDDSKRLFEKMPHR----------SIISLNTMISVIPE--------MERNPVTWNSMIS 371
+ + L + +++ + + ++ E +ERN V++N++++
Sbjct: 392 DIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLA 451
Query: 372 GYVQNNLHEKALQLYMTMR-KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
GYVQ E+AL+LY M+ + I + TF+ L C+ + QG+ +HAHL++
Sbjct: 452 GYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANIT 511
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
N+ V T LV MYS CG +N A+ F+ ++ N +W +++ GY +G EA+ LF+ M
Sbjct: 512 KNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQM 571
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH----YTCVVDLLGR 546
I P+ + +LS+CV +G R + ++ V T+E +VD+ +
Sbjct: 572 QLNGIKPDCFSLSSMLSSCVSLSDSQKG----RELHNFIVRNTMEEEGILQVVLVDMYAK 627
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + A + + D I+ D ++ ++SA
Sbjct: 628 CGSMDYAWK-VYDQTIKKDVILNNVMVSA 655
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 154/635 (24%), Positives = 258/635 (40%), Gaps = 155/635 (24%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
R G + A D++ +VV+WN ++ GY K ++E+ + M + V + TF+
Sbjct: 221 ARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFA 280
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+ L VC L S GKQ+H ++ G++ FVG+ L+ YA C + E +VFDE+ E
Sbjct: 281 SALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER 340
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N++ W+ ++ Q +DA +F++M + SGY
Sbjct: 341 NQVTWNSIISAEAQFGHFNDALVLFLRMQE----------SGYKS--------------- 375
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
N + S++ A A L +G+ +HG L++ D +G AL++ Y C
Sbjct: 376 --------NRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKC-- 425
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
G +E+A +F L E N +SYN+++ GY
Sbjct: 426 -----------------------------GMVEEAHQVFRSLLERNEVSYNALLAGYVQE 456
Query: 329 GQVDDSKRLFEKMP-------------------------------HRSIISLNTMISVIP 357
G+ +++ L+ M H +I N ++I
Sbjct: 457 GKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIV 516
Query: 358 EM-----------------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
E ERN +WNSMI GY QN ++AL+L+ M+ I
Sbjct: 517 ETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGI 576
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI----- 449
+ S + +C L Q+G+ LH +V+ E + LVDMY++CGS+
Sbjct: 577 KPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWK 636
Query: 450 --------------------------NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
NDA+ F + N A W +++ GY++ GL E+
Sbjct: 637 VYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKES 696
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP---TLEHYTCV 540
F MLE DI + T V +++ C + G ++ + G V LE T +
Sbjct: 697 FNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLE--TAL 754
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
VD+ + G + +A +M + + V W A++S
Sbjct: 755 VDMYSKCGAITKARTVFDNMNGK-NIVSWNAMISG 788
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 245/531 (46%), Gaps = 62/531 (11%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE---A 138
+N +S+++ C NS GK IH ++ +GY ++ + +L YA +++ A
Sbjct: 69 VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+++F+E MP++++ W +I YA+ VD
Sbjct: 129 RKLFEE-------------------------------MPERNLTAWNTMILAYAR-VDDY 156
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+ L+L+ MR SG N +++TF SVI+AC + + + ++K G + +GGA
Sbjct: 157 MEVLRLYGRMRGSG-NFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGA 215
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----AN 314
L++ Y D A+ D +E + N++I G + + E+A IF+R+ + +
Sbjct: 216 LVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPD 275
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKM----------PHRSIISL-------NTMISVIP 357
+ ++ S ++ D K++ K+ ++I + + + V
Sbjct: 276 NFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFD 335
Query: 358 EM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
EM ERN VTWNS+IS Q AL L++ M++ R + A + L + +
Sbjct: 336 EMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGK 395
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ LH HLV+ S++ +G++LVDMYS+CG + +A F S+ N ++ AL+ GY
Sbjct: 396 GRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQ 455
Query: 477 HGLGSEAVLLFEIMLEQD-IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
G EA+ L+ M +D I P+ TF +L+ C N+G +I + + +
Sbjct: 456 EGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNII 515
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
T +V + G L+ A+E M E +A W +++ + N E E
Sbjct: 516 VETELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEG--YQQNGETQE 563
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 169/398 (42%), Gaps = 77/398 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++ N ++ +G+ A+NLFDQM R WN++L GY+ ES + M
Sbjct: 646 VILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLE 705
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY-ECFEFVGSGLLFFYANCFEIE 136
S+++ + T TI+++C+ L +L G Q+H L++K G+ C + + L+ Y+ C I
Sbjct: 706 SDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAIT 765
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+A+ VFD ++ N + W+ M+ GY + +A ++ +MPKK +
Sbjct: 766 KARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMY-------------- 811
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
PNE TF +++ AC+ G V GL I + D +I
Sbjct: 812 -------------------PNEVTFLAILSACSHTGL-----VEEGLRIFTSMQEDYNIE 847
Query: 257 GALIEFYCGCEAFDGAMRVYDRLE-------NPCLNASNSLINGL-----ISMGRIEDAE 304
+ C + A R+ D E P ++ +L+ + MGR+ A+
Sbjct: 848 AKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLA-AQ 906
Query: 305 LIFNRLTEANSISYNSMIKGYAVYG---QVDDSKRLF-----EKMPHRSIISLNTMISVI 356
+F L N Y M YA G +V+D +++ +K P S I +N+ I +
Sbjct: 907 RLF-ELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIF 965
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+ + H K ++Y +R L +
Sbjct: 966 ----------------HAGSKTHPKTEEIYNNLRHLTL 987
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 6/189 (3%)
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
K A D +S L C S Q+G+ +H ++ + + Y+ T ++ +Y+R G ++
Sbjct: 64 KPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLD 123
Query: 451 D---AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
D A+ F + N+ AW ++ Y+ E + L+ M + TF V+
Sbjct: 124 DLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIK 183
Query: 508 ACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
AC+ + ++ S+ G+ L +VD R G + +A + + IE +V
Sbjct: 184 ACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDE--IEGTSV 241
Query: 568 V-WGALLSA 575
V W A+++
Sbjct: 242 VTWNAVIAG 250
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 210/625 (33%), Positives = 328/625 (52%), Gaps = 53/625 (8%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
+S N + + GQL AR LFD MP + VS+ TM+ G + F E+L + M
Sbjct: 336 ISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSD 395
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
V N+ T ++ C+ +++ + IH + +K E V + L+ Y C + EA
Sbjct: 396 GVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEA 455
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+R+FD + E N + W++ML GY + L+ A ++F ++P KDV+ W +I GY ++
Sbjct: 456 RRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYIL-MNRL 514
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+AL ++R M SG + NE +++ AC RL A +G +HG+++K GF+ I
Sbjct: 515 HEALVMYRAMLRSGLAL-NEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTT 573
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
+I FY C D A CL +G + E S+
Sbjct: 574 IIHFYAACGMMDLA----------CLQ---------FEVGAKDHLE------------SW 602
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+++ G+ VD ++++F+ MP R + S W++MISGY Q +
Sbjct: 603 NALVSGFIKNRMVDQARKIFDDMPERDVFS-----------------WSTMISGYAQTDQ 645
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
AL+L+ M I T +F A + LG+L++G+ H ++ N + +
Sbjct: 646 SRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAA 705
Query: 439 LVDMYSRCGSINDAQASFSSISSP--NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
L+DMY++CGSIN A F+ I +V+ W A++ G + HG S + +F M +I
Sbjct: 706 LIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIK 765
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
PN TF+GVLSAC AGLV G +IFR MKS Y V P ++HY C+VDLLGR+G L EAEE
Sbjct: 766 PNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEE 825
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
I+ MP++ D V+WG LL+AC ++ +GERAA+ + GL V+LSNIYA G+
Sbjct: 826 MIRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYADAGR 885
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWI 640
W +R+ + + +++ PGCS +
Sbjct: 886 WEDVSLVRRAIQNQRMERMPGCSGV 910
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 210/410 (51%), Gaps = 23/410 (5%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS N + + G + AR LF+++P + V+SW TM+ GY + E+L +
Sbjct: 464 EVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRA 523
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M RS + LNE ++S C +LN++ DG Q+H +V+K G++C+ F+ + ++ FYA C
Sbjct: 524 MLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGM 583
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
++ A F+ +D+ W+ ++ G+++ ++ A +F MP++DV W+ +ISGYA++
Sbjct: 584 MDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQT 643
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
D AL+LF M SG PNE T SV A A LG EG+ H + +++
Sbjct: 644 -DQSRIALELFHKMVASGIK-PNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDN 701
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRLT- 311
+ ALI+ Y C + + A++ ++++ + + S N++I GL S G +F+ +
Sbjct: 702 LRAALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQR 761
Query: 312 ---EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
+ N I++ ++ G V+ +R+F M + +V P+++ +
Sbjct: 762 YNIKPNPITFIGVLSACCHAGLVEPGRRIFRIM--------KSAYNVEPDIKH----YGC 809
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
M+ + L E+A ++ +R + + + L AC G + G+
Sbjct: 810 MVDLLGRAGLLEEAEEM---IRSMPMKADIVIWGTLLAACRTHGDVNIGE 856
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/528 (23%), Positives = 239/528 (45%), Gaps = 68/528 (12%)
Query: 60 SKWAKFDESLSLVSTMHRS--------NVKLNETTFSTILSVCAQL---NSLIDGKQIHC 108
SKW F S + + N +L++ + L++ + L +S G+Q+H
Sbjct: 234 SKWVSFSSSTNASPHVQDPQHFIGIFCNARLHQNHYECELALVSALKYCSSSSQGRQLHS 293
Query: 109 LVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD 168
LVLK G F+ + L+ YA I++A+ +FD N + ++M+ GY + + +
Sbjct: 294 LVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDN 353
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A +F MP K V +T +I G ++ + +AL++F+ MR G +PN+ T +VI AC
Sbjct: 354 ARKLFDIMPDKGCVSYTTMIMGLVQN-ECFREALEVFKDMRSDGV-VPNDLTLVNVIYAC 411
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
+ G +++H + IK E + L+ YC C A R++DR+ L + N
Sbjct: 412 SHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWN 471
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
++NG G ++ A +F R+ + + IS+ +MI GY + ++ ++ ++ M RS ++
Sbjct: 472 VMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAM-LRSGLA 530
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
LN ++ V L AC
Sbjct: 531 LNEILVV-----------------------------------------------NLVSAC 543
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
L ++ G LH +VK F+ ++ T+++ Y+ CG ++ A F + ++ +W
Sbjct: 544 GRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWN 603
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
AL++G+ + + +A +F+ M E+D+ ++ ++S + +++F M +
Sbjct: 604 ALVSGFIKNRMVDQARKIFDDMPERDVF----SWSTMISGYAQTDQSRIALELFHKMVAS 659
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHE---AEEFIKDMPIELDAVVWGALL 573
G+ P V + G L E A E+I + I L+ + AL+
Sbjct: 660 GIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALI 707
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 217/681 (31%), Positives = 356/681 (52%), Gaps = 62/681 (9%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYS 60
+YA Q + I T C G L R +F+ P+ R V +N M+ GY+
Sbjct: 65 VYARQLFEEIPNPDAIARTTLITAYCAL-GNLELGREIFNGTPLYMRDSVFYNAMITGYA 123
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ-LNSLIDGKQIHCLVLKSGYECFE 119
+L L M R + + ++ TF+++LS + + Q+HC V+K+G C
Sbjct: 124 HNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVS 183
Query: 120 F-VGSGLLFFYA--------NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAF 170
V + LL Y +C + A+++FDE+ + +EL W+ M+ GYV+ + ++ A
Sbjct: 184 SSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAR 243
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+VF M + W +ISGY GC ++AL L R MR G ++ T+ ++I ACA
Sbjct: 244 EVFEAMVENLGAAWNAMISGYVHC--GCFQEALTLCRKMRFLGIQF-DDITYTTIISACA 300
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
+G+F GK VH ++K + S CL+ SN+
Sbjct: 301 NVGSFQMGKQVHAYILKNELNPNHSF---------------------------CLSVSNA 333
Query: 290 LINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
LI ++++A IF + N I++N+++ GY G+++++K FE+MP +++++L
Sbjct: 334 LITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTL 393
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
MIS G QN ++ L+L+ MR + F+ ACS
Sbjct: 394 TVMIS-----------------GLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACS 436
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
LG+L+ G+ LHA LV +ES++ VG +++ MY++CG + A++ F ++ S ++ +W +
Sbjct: 437 VLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNS 496
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSY 528
++ HG G +A+ LF+ ML++ + P+ TF+ VL+AC AGLV +G F SM +SY
Sbjct: 497 MIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESY 556
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P +HY +VDL R+G A I MP + A VW ALL+ C NM++G A
Sbjct: 557 GITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEA 616
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A+++F L + YV+LSNIYA +G+W + +RK + V+K+P CSWIE+ ++VH
Sbjct: 617 AEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHV 676
Query: 649 FSVEDRNNPNCNVIYATLEHL 669
F V+D +P +Y LE L
Sbjct: 677 FMVDDDVHPEVLSVYRYLEQL 697
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 143/389 (36%), Gaps = 92/389 (23%)
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
+F + VH +I GF+ L+E YC A ++++ + NP
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNP--------- 77
Query: 292 NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
++I+ ++I Y G ++ + +F
Sbjct: 78 ----------------------DAIARTTLITAYCALGNLELGREIFNG----------- 104
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF-SVLFHACSC 410
P R+ V +N+MI+GY N AL+L+ MR+ TF SVL
Sbjct: 105 ----TPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLF 160
Query: 411 LGSLQQGQLLHAHLVKTPFES----------NVYVG------------------------ 436
+G+ QQ +H +VKT +VYV
Sbjct: 161 VGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPK 220
Query: 437 ------TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
T+++ Y R +N A+ F ++ AAW A+++GY H G EA+ L M
Sbjct: 221 RDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKM 280
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT----LEHYTCVVDLLGR 546
I + T+ ++SAC G G ++ + + P L ++ L +
Sbjct: 281 RFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCK 340
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + EA + MP+ + + W A+LS
Sbjct: 341 NNKVDEARKIFYAMPVR-NIITWNAILSG 368
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 205/660 (31%), Positives = 339/660 (51%), Gaps = 86/660 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V+ N ++ R G + LF +P R VS+N +L G+S+ + + R
Sbjct: 77 LVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLR 136
Query: 78 --SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ V+ + T S ++ V + L G+Q+HC +L+ G+ + F GS L+ YA I
Sbjct: 137 DEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPI 196
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
+A+RVFDE+ N ++ + M+ G ++C ++++A +F + ++D + WT +++G +
Sbjct: 197 GDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQ-- 254
Query: 196 DGCE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+G E +AL +FR MR G + ++YTF S++ AC L A EGK +H + + +E +
Sbjct: 255 NGLESEALDVFRRMRAEGVGI-DQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVF 313
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+G AL++ Y C + + AE +F R+ N
Sbjct: 314 VGSALVDMYSKCRS-------------------------------VRLAEAVFRRMMWKN 342
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
IS+ +MI GY G +++ R+F EM+R+ + + G V
Sbjct: 343 IISWTAMIVGYGQNGCGEEAVRVFS------------------EMQRDGIKPDDFTLGSV 384
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
+C+ L SL++G H + + V
Sbjct: 385 ------------------------------ISSCANLASLEEGAQFHCLALVSGLRPYVT 414
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
V +LV +Y +CGSI DA F +S + +WTAL+ GY+ G E + LFE ML +
Sbjct: 415 VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKG 474
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEA 553
+ P+ TF+GVLSAC R+GLV++G F SM+ + +VP +HYTC++DL RSG L +A
Sbjct: 475 VKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQA 534
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
EEFIK MP DA W LLSAC +ME+G+ AA+ + LD + ++YV+L +++A
Sbjct: 535 EEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASK 594
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
G+W +R+ + +VKK+PGCSWI+ ++VH FS +D+++P IY L+ L + +
Sbjct: 595 GEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKM 654
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 125/253 (49%), Gaps = 25/253 (9%)
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N+L+ S G + A +F+ + N ++ NS++ A G V D +RLF +P
Sbjct: 50 NTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLP----- 104
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK--LAIDRTRSTFSVLF 405
+R+ V++N++++G+ + H +A Y+ + + + +R T S +
Sbjct: 105 ------------QRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVV 152
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
S LG G+ +H +++ F + + G+ LVDMY++ G I DA+ F + NV
Sbjct: 153 MVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVV 212
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
++ G + +EA LFE + E+D + T+ +++ + GL +E + +FR M
Sbjct: 213 MCNTMITGLLRCKMVAEARALFEAIEERDSI----TWTTMVTGLTQNGLESEALDVFRRM 268
Query: 526 KSYGVVPTLEHYT 538
++ GV ++ YT
Sbjct: 269 RAEGV--GIDQYT 279
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 209/676 (30%), Positives = 362/676 (53%), Gaps = 56/676 (8%)
Query: 23 KAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL 82
K ++ + G + A +F+ + + ++TML GY+K + + +L+ + M +VK
Sbjct: 86 KLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKP 145
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
F+ +L VC L GK+IH ++ + + F +G++ YA C +I+
Sbjct: 146 VVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQID------ 199
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
DA+ +F +MP++D+V W +I+G++++ +KAL
Sbjct: 200 -------------------------DAYKMFDRMPERDLVSWNTIIAGFSQN-GFAKKAL 233
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
+L M++ G+ P+ T +V+ A A +G GK +HG I+ GF +I AL +
Sbjct: 234 ELVLRMQDEGQR-PDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISY 318
Y C + + A ++D ++ + + NS+++G + G E A +F ++ E ++
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352
Query: 319 NSMIKGYAVYGQVDDSK---RLFEKMPHRSIIS-LNTMISVIPEMER------------- 361
+ A G ++ K + +++ S IS +N++IS+ + +R
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412
Query: 362 -NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
V+WN+MI GY QN +AL + M+ L + T + A + L + + +
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWI 472
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H ++++ + N++V T+LVDMYS+CG+I+ A+ F IS +V W A+++GY HGLG
Sbjct: 473 HGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLG 532
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTC 539
A+ LF+ M + + PN T++ V+SAC +GLV+EG++ F+SMK YG+ P+++HY
Sbjct: 533 RAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGA 592
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
+VDLLGR+G + EA +FI++MPI V+GA+L AC N+EVGE+AA+K+F L+
Sbjct: 593 MVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDE 652
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNC 659
+V+L+NIYA KW K ++RK + +KK PGCS +EL + VH+F +P
Sbjct: 653 GGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQS 712
Query: 660 NVIYATLEHLTANLNS 675
IYA LE L + +
Sbjct: 713 KRIYAFLEELVYEIKA 728
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 130/537 (24%), Positives = 225/537 (41%), Gaps = 71/537 (13%)
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
+ +L +C + L QI LV+K+G + L+ ++ I EA RVF+ + +
Sbjct: 53 AVLLELCTSMKEL---HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
+ L+ ML GY + + + A +M DV
Sbjct: 110 KLDALYHTMLKGYAKNSSLETALAFLCRMRYDDV-------------------------- 143
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
P Y F +++ C GK +HG LI F + ++ Y C
Sbjct: 144 -------KPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCR 196
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEA---NSISYNSMIK 323
D A +++DR+ L + N++I G G + A EL+ E +SI+ +++
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLP 256
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVT 365
A G + K + L + + + +M ++ V+
Sbjct: 257 AAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS 316
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WNSM+ GYVQN EKA+ ++ M + ID T T HAC+ LG L++G+ +H +
Sbjct: 317 WNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD 376
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ S++ V SL+ MYS+C ++ A F++++ +W A++ GY+ +G SEA+
Sbjct: 377 QLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALN 436
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM----KIFRSMKSYGVVPTLEHYTCVV 541
F M + P++ T V V+ A + I RS + T T +V
Sbjct: 437 CFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVT----TALV 492
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
D+ + G +H A + DM + + W A++ + +G RAA +F KK
Sbjct: 493 DMYSKCGAIHMARKLF-DMISDRHVITWNAMIDG---YGTHGLG-RAALDLFDKMKK 544
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 110/220 (50%), Gaps = 5/220 (2%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ + ++ A ++F+ + RT VSWN M+ GY++ + E+L+ S M +K
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMK 447
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T +++ A+L+ K IH L+++S + FV + L+ Y+ C I A+++
Sbjct: 448 PDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKL 507
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV----VVWTKLISGYAKSVDG 197
FD + + + + W+ M+ GY L A D+F KM K V + + +IS + S
Sbjct: 508 FDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS-GL 566
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
++ L+ F+ M++ P+ + +++ R G E
Sbjct: 567 VDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA 606
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 213/716 (29%), Positives = 343/716 (47%), Gaps = 93/716 (12%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N +T G + TA LFD MP VVSWN ++ GY + F ES+ L M R
Sbjct: 84 VSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARR 143
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
V + TTF+ +L C+ L L G Q+H L +K+G E GS L+ Y C ++
Sbjct: 144 GVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD-- 201
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
DA F MP+++ V W I+G ++ +
Sbjct: 202 -----------------------------DALCFFYGMPERNWVSWGSAIAGCVQN-EQY 231
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+ L+LF M+ G + ++ ++ S R+CA + G+ +H IK F D +G A
Sbjct: 232 VRGLELFIEMQRLGLGV-SQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTA 290
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM--------------------- 297
+++ Y + A R + L N + SN+++ GL +
Sbjct: 291 IVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAET 350
Query: 298 ---------------------GRIE---DAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
G+ + +A LIF + + +S+S+N++I G DD
Sbjct: 351 KGYFPGQQVHCLAIKSVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDD 410
Query: 334 SKRLFEKMPH------RSIISLNTMISVIPEMER--------NPVTWNSMISGYVQNNLH 379
+ F +M +++ + +I E ++ V+WN+++SG+ N
Sbjct: 411 TILHFNEMLRFDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKES 470
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
E A + + M + + TF+ + C+ L +++ G+ +H ++K + Y+ ++L
Sbjct: 471 EAAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTL 530
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
VDMY++CG + D+ F + + +W A++ GY+ HGLG EA+ +FE M ++++VPN
Sbjct: 531 VDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNH 590
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
ATFV VL AC GL ++G + F M + Y + P LEH+ C+VD+LGRS EA +FI
Sbjct: 591 ATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFIN 650
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
MP + DAV+W LLS C ++E+ E AA + LD S Y++LSN+YA GKW
Sbjct: 651 SMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWAD 710
Query: 619 KMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
R+ L +KK+PGCSWIE S +H F V D+ +P +Y L L +
Sbjct: 711 VSRTRRLLKQGRLKKEPGCSWIEAQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMK 766
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 125/551 (22%), Positives = 228/551 (41%), Gaps = 68/551 (12%)
Query: 86 TFSTILSVCAQLN--SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
TFS + CAQ +L G+ H ++ SG+ FV + LL YA C A+RVFD
Sbjct: 17 TFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACARRVFD 76
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ + + W+ ML Y +S A +F MP DVV W L+SGY + ++++
Sbjct: 77 AMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQR-GMFQESVD 135
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
LF M G + P+ TF ++++C+ L G VH L +K G E D G AL++ Y
Sbjct: 136 LFVEMARRGVS-PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMY 194
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLI---------------------------- 295
C + D A+ + + + S I G +
Sbjct: 195 GKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYA 254
Query: 296 ------------SMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+ GR A I N+ + ++ + +++ YA + D++R F +P+
Sbjct: 255 SAFRSCAAMSCLNTGRQLHAHAIKNKFS-SDRVVGTAIVDVYAKANSLTDARRAFFGLPN 313
Query: 344 RSIISLNTMIS----VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
++ + N M+ + + + V+ + + S + + Q++ K +D
Sbjct: 314 HTVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLD-LYG 372
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN-----------------VYVGTSLVDM 442
L A ++Q + + + E N +V +++VDM
Sbjct: 373 KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDM 432
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
Y +CG I++AQ I V +W A+++G+S + A F ML+ + P+ TF
Sbjct: 433 YCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTF 492
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
VL C + G +I + ++ + +VD+ + G + ++ + +
Sbjct: 493 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVE- 551
Query: 563 ELDAVVWGALL 573
+ D V W A++
Sbjct: 552 KRDFVSWNAMI 562
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 178/416 (42%), Gaps = 83/416 (19%)
Query: 216 PNEYTFDSVIRACARLG--AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P TF V ++CA+ G A G+ H ++ GF + L++ Y C A
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 72
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
RV+D + + N+++ G I A +F+ + + + +S+N+++ GY G +
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 334 SKRLFEKMPHRSIISLNTMISVIPE----------------------MERNPVTWNSMIS 371
S LF +M R + T +V+ + +E + T ++++
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192
Query: 372 GY-------------------------------VQNNLHEKALQLYMTMRKLAIDRTRST 400
Y VQN + + L+L++ M++L + ++ +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
++ F +C+ + L G+ LHAH +K F S+ VGT++VD+Y++ S+ DA+ +F +
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ V A+M G LF M+ I + + GV SAC G +
Sbjct: 313 NHTVETSNAMMVG------------LF--MIRSSIRFDVVSLSGVFSACAETKGYFPGQQ 358
Query: 521 IF-RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ ++KS V+DL G+ L EA + M + D+V W A+++A
Sbjct: 359 VHCLAIKS------------VLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 401
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 42/217 (19%)
Query: 397 TRSTFSVLFHACSCLG--SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
R TFS +F +C+ G +L G+ HA +V + F +V L+ MY+RC A+
Sbjct: 14 ARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACARR 73
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F ++ + +W ++ YSH G S AV LF+ M + D+V ++ ++S + G+
Sbjct: 74 VFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVV----SWNALVSGYCQRGM 129
Query: 515 VNEGMKIFRSMKSYGVVPTLEHY-----------------------------------TC 539
E + +F M GV P + +
Sbjct: 130 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSA 189
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+VD+ G+ L +A F MP E + V WG+ ++ C
Sbjct: 190 LVDMYGKCRSLDDALCFFYGMP-ERNWVSWGSAIAGC 225
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 226/740 (30%), Positives = 360/740 (48%), Gaps = 95/740 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G + AR +F+++ +R VSW +L GY++ +E++ L MHRS V S+
Sbjct: 89 KKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSS 148
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY-------------------- 129
ILS C + G+ IH V K G+ FVG+ L+ Y
Sbjct: 149 ILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCD 208
Query: 130 -----------ANCFEIEEAKRVFDE-------------------------LHEDNELLW 153
A C + A +FDE L + +L
Sbjct: 209 SVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHS 268
Query: 154 SLMLVG--------------YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
L+ G YV+ + +A +F + +VV+W ++ Y + +D
Sbjct: 269 YLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQ-IDDLA 327
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
K+ +F M +G PN++T+ ++R C G G+ +H L IK GF+ D + G L
Sbjct: 328 KSFDIFYRMLAAGVR-PNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVL 386
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE------- 312
I+ Y D A R+ D +E + + S+I G + ++A F +
Sbjct: 387 IDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDN 446
Query: 313 ---ANSISYNSMIK----GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------ 359
A++IS + IK G ++ +V S + ++ L + E
Sbjct: 447 IGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEA 506
Query: 360 --ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
+ +TWN +ISG+ Q+ L+E+AL+++M M + TF A + L ++QG
Sbjct: 507 IEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQG 566
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+ +HA ++KT + S + +L+ +Y +CGSI DA+ F ++ N +W ++ S H
Sbjct: 567 KQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQH 626
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEH 536
G G EA+ LF+ M +Q + P+ TFVGVL+AC GLV EG+ F+SM + +G+ P +H
Sbjct: 627 GRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDH 686
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
Y CVVD+LGR+G L A+ F+++MPI D++VW LLSAC N+E+GE AA+ + L+
Sbjct: 687 YACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELE 746
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
++YV+LSN YAV GKW + IRK + V+K+PG SWIE+ + VHAF V DR +
Sbjct: 747 PHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLH 806
Query: 657 PNCNVIYATLEHLTANLNSV 676
P + IY L HL L +
Sbjct: 807 PLADQIYNFLSHLNDRLYKI 826
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 161/677 (23%), Positives = 281/677 (41%), Gaps = 80/677 (11%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVC---AQLNSL 100
M R S+N L G+ ++ L L + R + L F+ L C + L
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPL 60
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
+ +IH + G + +G+ L+ YA + A+RVF+EL
Sbjct: 61 V--PEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEEL--------------- 103
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
+D V W ++SGYA++ G E+A++L+R M SG +P Y
Sbjct: 104 ----------------SVRDNVSWVAVLSGYAQNGLG-EEAVRLYREMHRSGV-VPTPYV 145
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
S++ AC + F G+++H + K GF + +G ALI Y C +F A RV+ +
Sbjct: 146 LSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDML 205
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKR 336
N+LI+G G + A IF+ + +S++ S++ + G + K+
Sbjct: 206 YCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQ 265
Query: 337 L----------FEKMPHRSIISLNTMISVIPEM--------ERNPVTWNSMISGYVQNNL 378
L + + S++ L I E N V WN M+ Y Q +
Sbjct: 266 LHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDD 325
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
K+ ++ M + + T+ + C+ G + G+ +H+ +K F+S++YV
Sbjct: 326 LAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGV 385
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+DMYS+ G ++ AQ I +V +WT+++ GY H EA+ F+ M I P+
Sbjct: 386 LIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPD 445
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
+SAC V++G +I + G + + +V L R G EA F
Sbjct: 446 NIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEA--FSS 503
Query: 559 DMPIE-LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK--KPISAYVILSNIYAVLG- 614
IE + + W L+S + + E A + +D+ + + +S+I A
Sbjct: 504 FEAIEHKEGITWNGLISG---FAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANL 560
Query: 615 ---KWGKKMDIRKRLTHLEVKKDPGCSWIEL--------NSRVHAFSVEDRNNPNCNVIY 663
K GK++ R T + + + I L ++++ F + RN + N I
Sbjct: 561 ADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTII 620
Query: 664 ATLEHLTANLNSVVLFD 680
L ++ LFD
Sbjct: 621 TCCSQHGRGLEALDLFD 637
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+++A +T T ET I +N I+ G+ G + A+ F +M R VSWNT++ S+
Sbjct: 568 QIHARVIKTGYTSETEI--SNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQ 625
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
+ E+L L M + +K ++ TF +L+ C+ + + +G
Sbjct: 626 HGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEG 667
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 200/653 (30%), Positives = 328/653 (50%), Gaps = 55/653 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ + N ++ ++G+L AR +F +MP R VSW M+ G ++ +F E++ + M
Sbjct: 96 VFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVT 155
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + T + +LS CA + G+++H V+K G V + +L Y C + E
Sbjct: 156 DGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAET 215
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VF+ + E + W+ M+ M A +F MP + +V W +I+GY + +G
Sbjct: 216 ARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQ--NG 273
Query: 198 CE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
KAL F M P+E+T SV+ ACA LG GK VH +++ + +
Sbjct: 274 LNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVT 333
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR--LTEAN 314
ALI Y G +E+A + + + + N
Sbjct: 334 NALISMYA-------------------------------KSGSVENARGVMQQAVMADLN 362
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
IS+ ++++GY G + ++ +F+ M +R + V W +MI GY
Sbjct: 363 VISFTALLEGYVKLGDMKHAREMFDVMSNRDV-----------------VAWTAMIVGYE 405
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
QN +++A++L+ M + + T + + C+ L L+ G+ +H +++ E +
Sbjct: 406 QNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSS 465
Query: 435 VGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
V S+V MY+R GS+ A+ F + WT+++ + HGLG +AV LFE ML
Sbjct: 466 VSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRV 525
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHE 552
+ P+ TFVGVLSAC G V+EG + F+ ++ +G+VP + HY C+VDLL R+G E
Sbjct: 526 GVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSE 585
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A+EFI+ MP+E DA+ WG+LLSAC N ++ E AA+K+ +D AY LSN+Y+
Sbjct: 586 AQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSA 645
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
G+W I KR VKK+ G SW + +RVH F +D +P + +Y T
Sbjct: 646 CGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRT 698
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 138/535 (25%), Positives = 239/535 (44%), Gaps = 103/535 (19%)
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE-----IEEAKRVF 142
+ +L C + G+ IH +K+G ++ + LL +YA EA+R+F
Sbjct: 27 ARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLF 86
Query: 143 DEL--HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
DE+ + N W+ +L Y + ++DA VF +MP++D V WT ++ G + V +
Sbjct: 87 DEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNR-VGRFGE 145
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
A+K+F M G + P ++T +V+ +CA A G+ VH ++K G
Sbjct: 146 AIKMFLDMVTDGLS-PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGL----------- 193
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNS 320
+ C+ +NS++N G E A +F R+ E + S+N+
Sbjct: 194 --------------------SSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNA 233
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
M+ A G++D + LFE MP R+I+S WN++I+GY QN L+
Sbjct: 234 MVSLDAHLGRMDLALSLFENMPDRTIVS-----------------WNAVIAGYNQNGLNA 276
Query: 381 KALQLYMTM---RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
KAL + M +A D T + + AC+ LG + G+ +HA+++++ V
Sbjct: 277 KALWFFSRMLSYSTMAPDEF--TITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTN 334
Query: 438 SLVDMYSRCGSINDAQA-------------SFSSI--------------------SSPNV 464
+L+ MY++ GS+ +A+ SF+++ S+ +V
Sbjct: 335 ALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDV 394
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI--- 521
AWTA++ GY +G EA+ LF +M+ PN+ T VLS C + G +I
Sbjct: 395 VAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCK 454
Query: 522 -FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
RS++ + +V + RSG L A + + V W +++ A
Sbjct: 455 AIRSLQEQSSSVS----NSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVA 505
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 228/485 (47%), Gaps = 35/485 (7%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E + S N ++ G++ A +LF+ MP RT+VSWN ++ GY++ ++L S
Sbjct: 225 ERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSR 284
Query: 75 M-HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M S + +E T +++LS CA L + GKQ+H +L+S V + L+ YA
Sbjct: 285 MLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSG 344
Query: 134 EIEEAKRVFDE--LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+E A+ V + + + N + ++ +L GYV+ M A ++F M +DVV WT +I GY
Sbjct: 345 SVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGY 404
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
++ ++A++LFR M SG PN YT +V+ CA L GK +H I+ E
Sbjct: 405 EQNGHN-DEAMELFRLMIRSGPE-PNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQ 462
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRL 310
S+ +++ Y + A RV+DR+ + S+I L G EDA +F +
Sbjct: 463 SSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEM 522
Query: 311 ----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
+ + I++ ++ G VD+ KR F+++ + ++PEM +
Sbjct: 523 LRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKH--------GIVPEMSH----Y 570
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
M+ + L +A + ++++ ++ + L AC + +L L+
Sbjct: 571 ACMVDLLARAGLFSEAQEF---IQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLS 627
Query: 427 -TPFESNVYVGTSLVDMYSRCGSINDAQASF-----SSISSPNVAAWTALMNGYSHHGLG 480
P S Y ++L ++YS CG NDA + S+ +WT + N H G
Sbjct: 628 IDPGNSGAY--SALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRV--HVFG 683
Query: 481 SEAVL 485
++ VL
Sbjct: 684 ADDVL 688
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 42/184 (22%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLV 72
QE +N +T R+G L AR +FD++ R V+W +M+ ++ ++++ L
Sbjct: 460 QEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLF 519
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M R VK + TF +LS C + G+
Sbjct: 520 EEMLRVGVKPDRITFVGVLSACTHV----------------GF----------------- 546
Query: 133 FEIEEAKRVFDELHEDNELL-----WSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTK 186
++E KR F +L + + ++ ++ M+ + L S+A + +MP + D + W
Sbjct: 547 --VDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGS 604
Query: 187 LISG 190
L+S
Sbjct: 605 LLSA 608
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 207/638 (32%), Positives = 327/638 (51%), Gaps = 85/638 (13%)
Query: 39 NLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNETTFSTILSVCAQL 97
LF MP R VS+N ++ G+S S+ L + R +V+ T S ++ V + L
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159
Query: 98 NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
+ G +HC VL+ G+ + FVGS L+ YA I +A+RVF E+ ++++ ++
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMP 216
G ++C ++ DA +F M +D + WT +++G + +G + +AL +FR MR G +
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ--NGLQLEALDVFRRMRAEGVGI- 276
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
++YTF S++ AC L A EGK +H + + +E + +G AL++ Y C +
Sbjct: 277 DQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRS-------- 328
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
I AE +F R+T N IS+ +MI GY +++ R
Sbjct: 329 -----------------------IRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
F +M M + P + T S+IS
Sbjct: 366 AFSEM---------QMDGIKP----DDFTLGSVIS------------------------- 387
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+C+ L SL++G H + + + V +LV +Y +CGSI DA F
Sbjct: 388 ----------SCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLF 437
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+S + +WTAL+ GY+ G E + LFE ML + P+ TF+GVLSAC RAGLV
Sbjct: 438 DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVE 497
Query: 517 EGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+G F SM K +G+VP +HYTC++DL RSG EAEEFIK MP DA W LLS+
Sbjct: 498 KGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Query: 576 CWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
C NME+G+ AA+ + D + ++YV+L +++A G+W + +R+ + +VKK+P
Sbjct: 558 CRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEP 617
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
GCSWI+ ++VH FS +D+++P + IY LE L + +
Sbjct: 618 GCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 205/514 (39%), Gaps = 113/514 (21%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N IT R + A+ LF M R ++W TM+ G ++ E+L + M
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V +++ TF +IL+ C L +L +GKQIH + ++ YE FVGS L+ Y+ C I
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VF + N + W+ M+VGY Q +A F +M +DG
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM-----------------QMDG 374
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+ P+++T SVI +CA L + EG H L + G ++
Sbjct: 375 IK----------------PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSN 418
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL+ Y C G IEDA +F+ ++ + +S
Sbjct: 419 ALVTLYGKC-------------------------------GSIEDAHRLFDEMSFHDQVS 447
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+ +++ GYA +G+ ++ LFEKM + ++ + VT+ ++S +
Sbjct: 448 WTALVTGYAQFGKAKETIDLFEKM-------------LANGLKPDGVTFIGVLSACSRAG 494
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
L EK C S+Q+ + P + + T
Sbjct: 495 LVEK-------------------------GCDYFDSMQKDHGI------VPIDDHY---T 520
Query: 438 SLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
++D+YSR G +A+ + SP+ W L++ G E +LE D
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETD-P 579
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
N A++V + S G E + R M+ V
Sbjct: 580 QNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/668 (30%), Positives = 350/668 (52%), Gaps = 56/668 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L++A ++F M R V++NT++ G S+ ++++ L M ++ + T ++++
Sbjct: 320 GSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLV 379
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ +L G+Q+H K G+ + + LL YA C +IE A
Sbjct: 380 VACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETA------------- 426
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+ F++ ++VV+W ++ Y +D + ++FR M+
Sbjct: 427 ------------------LNYFLETEVENVVLWNVMLVAYGL-LDDLRNSFRIFRQMQIE 467
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
E +PN+YT+ S+++ C RLG G+ +H +IK F+ + + LI+ Y D
Sbjct: 468 -EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDT 526
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----------ANSIS---- 317
A + R + + ++I G + A F ++ + N++S
Sbjct: 527 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 586
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------ERNPVTWNSM 369
++ +G ++ Q S + ++++L + I E + + WN++
Sbjct: 587 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNAL 646
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+SG+ Q+ +E+AL+++ M + ID TF A S +++QG+ +HA + KT +
Sbjct: 647 VSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 706
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+S V +++ MY++CGSI+DA+ F +S N +W A++N YS HG GSEA+ F+
Sbjct: 707 DSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQ 766
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSG 548
M+ ++ PN T VGVLSAC GLV++G++ F SM + YG+ P EHY CVVD+L R+G
Sbjct: 767 MIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAG 826
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L A++FI +MPIE DA+VW LLSAC NME+GE AA + L+ + + YV+LSN
Sbjct: 827 LLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN 886
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YAV KW + R+++ VKK+PG SWIE+ + +H+F V D+N+P + I+ +
Sbjct: 887 LYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKD 946
Query: 669 LTANLNSV 676
LT + +
Sbjct: 947 LTKRASEI 954
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/580 (24%), Positives = 261/580 (45%), Gaps = 64/580 (11%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I RNG + AR +FD + ++ SW M+ G SK E++ L M+ +
Sbjct: 209 NPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIM 268
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
FS++LS C ++ SL G+Q+H LVLK G+ +V + L+ Y + + A+ +
Sbjct: 269 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHI 328
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F + + + + ++ ++ G QC GY EKA
Sbjct: 329 FSNMSQRDAVTYNTLINGLSQC--------------------------GYG------EKA 356
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
++LF+ M+ G P+ T S++ AC+ G G+ +H K GF ++ I GAL+
Sbjct: 357 MELFKRMQLDGLE-PDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLN 415
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-------AN 314
Y C + A+ + E + N + L++ G ++D F + N
Sbjct: 416 LYAKCSDIETALNYFLETEVENVVLWNVM---LVAYGLLDDLRNSFRIFRQMQIEEIVPN 472
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-SVIPEM-------------- 359
+Y S++K G ++ +++ ++ S LN + SV+ +M
Sbjct: 473 QYTYPSILKTCIRLGDLELGEQIHSQIIKTS-FQLNAYVCSVLIDMYAKLGKLDTAWDIL 531
Query: 360 ----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ V+W +MI+GY Q N +KAL + M I + AC+ L +L+
Sbjct: 532 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 591
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+GQ +HA + F S++ +LV +YS+CG+I +A +F + + AW AL++G+
Sbjct: 592 EGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQ 651
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
G EA+ +F M + I N TF + A + +G ++ + G E
Sbjct: 652 QSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE 711
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ + + G + +A++ ++ ++ + V W A+++A
Sbjct: 712 VCNAIISMYAKCGSISDAKKQFLELSMK-NEVSWNAMINA 750
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 150/585 (25%), Positives = 250/585 (42%), Gaps = 59/585 (10%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A +FD+MP RT+ +WN M+ + + + L M NV NE TFS +L
Sbjct: 117 GDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVL 176
Query: 92 SVCAQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
C + D +QIH ++ G V + L+ Y+ ++ A+RVFD L+
Sbjct: 177 EACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLY---- 232
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMR 209
KD W +ISG +K + CE +A++LF M
Sbjct: 233 ---------------------------LKDHSSWVAMISGLSK--NECEVEAIRLFCDMY 263
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G MP Y F SV+ AC ++ + G+ +HGL++K GF D + AL+ Y +
Sbjct: 264 VLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSL 322
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGY 325
A ++ + N+LINGL G E A +F R+ E +S + S++
Sbjct: 323 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVAC 382
Query: 326 AVYGQVDDSKRLFEKMPHRSIIS-----------------LNTMISVIPEME-RNPVTWN 367
+ G + ++L S + T ++ E E N V WN
Sbjct: 383 SSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWN 442
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
M+ Y + + +++ M+ I + T+ + C LG L+ G+ +H+ ++KT
Sbjct: 443 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 502
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F+ N YV + L+DMY++ G ++ A + +V +WT ++ GY+ + +A+ F
Sbjct: 503 SFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 562
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
ML++ I + +SAC + EG +I G L +V L +
Sbjct: 563 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKC 622
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
G++ EA + D + W AL+S N E R +M
Sbjct: 623 GNIEEAYLAFEQTEAG-DNIAWNALVSGFQQSGNNEEALRVFARM 666
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 133/550 (24%), Positives = 227/550 (41%), Gaps = 102/550 (18%)
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLN-SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
+ ++ ++ N T +L C + N SL +G+++H +LK G++ + LL FY
Sbjct: 55 IDSVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYL 114
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
+++ A +VFDE MP++ + W K+I
Sbjct: 115 FKGDLDGALKVFDE-------------------------------MPERTIFTWNKMIKE 143
Query: 191 YA-KSVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLG--AFCEGKVVHGLLIK 246
A +S+ G K LF R EN+ PNE TF V+ AC R G AF + +H +I
Sbjct: 144 LASRSLSG--KVFCLFG--RMVNENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARIIY 198
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL----------------ENPCLNASNSL 290
G + LI+ Y D A RV+D L +N C + L
Sbjct: 199 QGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRL 258
Query: 291 INGLISMG----------------RIEDAE-------LIFNRLTEANSISYNSMIKGYAV 327
+ +G +IE E L+ +++ N+++ Y
Sbjct: 259 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 318
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G + ++ +F M +R+ VT+N++I+G Q EKA++L+
Sbjct: 319 LGSLISAEHIFSNMS-----------------QRDAVTYNTLINGLSQCGYGEKAMELFK 361
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
M+ ++ +T + L ACS G+L GQ LHA+ K F SN + +L+++Y++C
Sbjct: 362 RMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCS 421
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
I A F NV W ++ Y + +F M ++IVPN T+ +L
Sbjct: 422 DIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 481
Query: 508 ACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC--VVDLLGRSGHLHEAEEFIKDMPIELD 565
C+R G + G +I + L Y C ++D+ + G L A + + + D
Sbjct: 482 TCIRLGDLELGEQIHSQIIKTSF--QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-D 538
Query: 566 AVVWGALLSA 575
V W +++
Sbjct: 539 VVSWTTMIAG 548
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 83/160 (51%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T + G + A F+Q ++WN ++ G+ + +E+L + + M+R +
Sbjct: 613 NALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGID 672
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
N TF + + ++ ++ GKQ+H ++ K+GY+ V + ++ YA C I +AK+
Sbjct: 673 SNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQ 732
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
F EL NE+ W+ M+ Y + S+A D F +M +V
Sbjct: 733 FLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNV 772
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 135/310 (43%), Gaps = 43/310 (13%)
Query: 292 NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
NG + GR ++ I + N+ ++ Y G +D + ++F++MP R+I
Sbjct: 81 NGSLDEGRKLHSQ-ILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIF---- 135
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
TWN MI +L K L+ M + TFS + AC
Sbjct: 136 -------------TWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG- 181
Query: 412 GSLQQG--QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
GS+ + +HA ++ + V L+D+YSR G ++ A+ F + + ++W A
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVA 241
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
+++G S + EA+ LF M I+P F VLSAC + E ++I + +G
Sbjct: 242 MISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKI----ESLEIGEQL--HG 295
Query: 530 VVPTL----EHYTC--VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL---LSACWFWM 580
+V L + Y C +V L G L AE +M + DAV + L LS C +
Sbjct: 296 LVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMS-QRDAVTYNTLINGLSQCGY-- 352
Query: 581 NMEVGERAAQ 590
GE+A +
Sbjct: 353 ----GEKAME 358
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 33/190 (17%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+++A ++T ET + N I+ + G + A+ F ++ ++ VSWN M+ YSK
Sbjct: 696 QVHAVITKTGYDSETEVC--NAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSK 753
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
E+L M SNV+ N T +LS C+ H ++ G E FE +
Sbjct: 754 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS-----------HIGLVDKGIEYFESM 802
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKD 180
+ Y + E V D L + L+S A D ++MP + D
Sbjct: 803 NTE----YGLAPKPEHYVCVVDML---------------TRAGLLSRAKDFILEMPIEPD 843
Query: 181 VVVWTKLISG 190
+VW L+S
Sbjct: 844 ALVWRTLLSA 853
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 232/769 (30%), Positives = 370/769 (48%), Gaps = 97/769 (12%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
++++AT + + LI N I +NG + AR +F ++ R VSW ML GY+
Sbjct: 63 LEIHATSVVRGLGADRLI--GNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYA 120
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ E+ L S MH + V S++LS C + G+ IH V K + F
Sbjct: 121 QSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180
Query: 121 VGSGLLFFY-------------------------------ANCFEIEEAKRVFDE----- 144
VG+ L+ Y A C E A ++FDE
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSG 240
Query: 145 --------------------LHEDNELLWSLMLVG--------------YVQCNLMSDAF 170
L + +L L+ G YV+C + A
Sbjct: 241 LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAH 300
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACAR 230
D+F + +VV+W ++ Y + D K+ ++F M+ +G + PN++T+ ++R C
Sbjct: 301 DIFNLGDRTNVVLWNLMLVAYGQISD-LAKSFEIFGQMQATGIH-PNQFTYPCILRTCTC 358
Query: 231 LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSL 290
G G+ +H L IK GFE D + G LI+ Y D A ++ + LE + + S+
Sbjct: 359 TGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSM 418
Query: 291 INGLISMGRIEDAELIFNRLTEANSISYN--------------SMIKGYAVYGQVDDSKR 336
I G + E+A F + + N +M +G ++ +V S
Sbjct: 419 IAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY 478
Query: 337 LFEKMPHRSIISL-------NTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMT 388
+ ++++L S+ E+E ++ +TWN +ISG+ Q+ L+++AL ++M
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMK 538
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M + TF A + L ++QG+ +H VKT S V +L+ +Y +CGS
Sbjct: 539 MGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGS 598
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
I DA+ FS +S N +W ++ S HG G EA+ LF+ M ++ + PN TF+GVL+A
Sbjct: 599 IEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAA 658
Query: 509 CVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C GLV EG+ F+SM + YG+ P +HY CVVD+LGR+G L A F+ +MPI +A+
Sbjct: 659 CSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAM 718
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
+W LLSAC N+E+GE AA+ + L+ ++YV+LSN YAV GKW + +RK +
Sbjct: 719 IWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMK 778
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
++K+PG SWIE+ + VHAF V DR +P + IY L L L+ +
Sbjct: 779 DRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKI 827
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 143/578 (24%), Positives = 255/578 (44%), Gaps = 62/578 (10%)
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ L+ +L++ Y + L+ A VF ++ +D V W ++SGYA+S G E A +L+ M
Sbjct: 77 DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKE-AFRLYSQM 135
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ +P Y SV+ AC + F +G+++H + K F + +G ALI Y G +
Sbjct: 136 HWTAV-IPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGS 194
Query: 269 FDGAMRVY------DRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISY 318
F A RV+ DR+ N+LI+G G E A IF+ + + ++
Sbjct: 195 FKLAERVFCDMLFCDRV------TFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTV 248
Query: 319 NSMIKGYAVYGQVDDSKRL----------FEKMPHRSIISLNTMISVIPEM--------E 360
S++ A G + K+L F+ + S++ L I
Sbjct: 249 ASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDR 308
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
N V WN M+ Y Q + K+ +++ M+ I + T+ + C+C G ++ G+ +
Sbjct: 309 TNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQI 368
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H+ +K FES++YV L+DMYS+ G ++ A+ + +V +WT+++ GY H
Sbjct: 369 HSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFC 428
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
EA+ F+ M + + P+ SAC + +G++I + G + + +
Sbjct: 429 EEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTL 488
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW--------FWMNMEVGERAAQKM 592
V+L R G EA +++ + D + W L+S + M++G+ A+
Sbjct: 489 VNLYARCGRSEEAFSLFREIEHK-DEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYN 547
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
ISA L++I K GK++ R T + + + I L + S+E
Sbjct: 548 VFTFISAISALANLADI-----KQGKQVHGRAVKTGHTSETEVANALISLYGKCG--SIE 600
Query: 653 D----------RNNPNCNVIYATLEHLTANLNSVVLFD 680
D RN + N I + L ++ LFD
Sbjct: 601 DAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFD 638
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 212/654 (32%), Positives = 337/654 (51%), Gaps = 74/654 (11%)
Query: 54 TMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS 113
++LC K + E+L +++TM ++ F +L CA+L SL G+++H +LKS
Sbjct: 20 SVLC---KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKS 76
Query: 114 GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
G + N L + +L Y +C ++DA VF
Sbjct: 77 GIQ-------------------------------PNRYLENTLLSMYAKCGSLTDARRVF 105
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
+ +++V WT +I + E A K + M+ +G P++ TF S++ A
Sbjct: 106 DSIRDRNIVSWTAMIEAFVAGNKNLE-AFKCYETMKLAG-CKPDKVTFVSLLNAFTNPEL 163
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
G+ VH +++ G E + +G +L+ Y C A ++DRL + LI G
Sbjct: 164 LQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAG 223
Query: 294 LISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS- 348
G+++ A + + +A N I++ S+++G ++ K++ HR II
Sbjct: 224 YAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKV-----HRYIIQS 278
Query: 349 --------LNTMISV----------------IPEMERNPVTWNSMISGYVQNNLHEKALQ 384
+N++I++ +P R+ VTW +M++GY Q H++A+
Sbjct: 279 GYGRELWVVNSLITMYCKCGGLEEARKLFSDLPH--RDVVTWTAMVTGYAQLGFHDEAIN 336
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
L+ M++ I + TF+ + +CS LQ+G+ +H LV + +VY+ ++LV MY+
Sbjct: 337 LFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYA 396
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGY-SHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
+CGS++DA F+ +S NV AWTA++ G + HG EA+ F+ M +Q I P+ TF
Sbjct: 397 KCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFT 456
Query: 504 GVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
VLSAC GLV EG K FRSM YG+ P +EHY+C VDLLGR+GHL EAE I MP
Sbjct: 457 SVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPF 516
Query: 563 ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
VWGALLSAC ++E GERAA+ + LD AYV LS+IYA G++ +
Sbjct: 517 IPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKV 576
Query: 623 RKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
R+ + +V K+PG SWIE++ +VH F VED+++P IY L LT + +
Sbjct: 577 RQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEM 630
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 123/535 (22%), Positives = 241/535 (45%), Gaps = 59/535 (11%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N ++ + G L AR +FD + R +VSW M+ + K E+ TM + K
Sbjct: 86 NTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCK 145
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ TF ++L+ L G+++H ++++G E VG+ L+ YA C +I +A+ +
Sbjct: 146 PDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVI 205
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD L E N + W+L++ GY Q DV A
Sbjct: 206 FDRLPEKNVVTWTLLIAGYAQ----QGQVDV----------------------------A 233
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
L+L M+++ E PN+ TF S+++ C A GK VH +I+ G+ + + +LI
Sbjct: 234 LELLETMQQA-EVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLIT 292
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSIS 317
YC C + A +++ L + + +++ G +G ++A +F R+ + + ++
Sbjct: 293 MYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMT 352
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPH----------RSIISLNTMISVIPEM-------- 359
+ S++ + + + KR+ +++ H +++S+ + +
Sbjct: 353 FTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMS 412
Query: 360 ERNPVTWNSMISG-YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
ERN V W ++I+G Q+ +AL+ + M+K I + TF+ + AC+ +G +++G+
Sbjct: 413 ERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR 472
Query: 419 L-LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSH 476
+ + + V + VD+ R G + +A+ S+ P + W AL++
Sbjct: 473 KHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRV 532
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
H E +L+ D + A +V + S AG + K+ + M+ VV
Sbjct: 533 HSDVERGERAAENVLKLDPDDDGA-YVALSSIYAAAGRYEDAEKVRQVMEKRDVV 586
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 172/384 (44%), Gaps = 61/384 (15%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N IT + G L AR LF +P R VV+W M+ GY++ DE+++L M + +K
Sbjct: 288 NSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIK 347
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ TF+++L+ C+ L +GK+IH ++ +GY ++ S L+ YA C +++A V
Sbjct: 348 PDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLV 407
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F+++ E N + W T +I+G C +A
Sbjct: 408 FNQMSERNVVAW-------------------------------TAIITGCCAQHGRCREA 436
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIGGALI 260
L+ F M++ G P++ TF SV+ AC +G EG K + + G + ++
Sbjct: 437 LEYFDQMKKQGIK-PDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIK-------PMV 488
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLN----ASNSLINGLISMGRI-------EDAELIFNR 309
E Y G + EN L+ S+ L+S R+ E A +
Sbjct: 489 EHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLK 548
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
L + +Y ++ YA G+ +D++++ + M R V+ E ++ + +
Sbjct: 549 LDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKR---------DVVKEPGQSWIEVDGK 599
Query: 370 ISGY-VQNNLHEKALQLYMTMRKL 392
+ + V++ H ++ Q+Y+ + KL
Sbjct: 600 VHVFHVEDKSHPESEQIYVELGKL 623
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 216/681 (31%), Positives = 354/681 (51%), Gaps = 62/681 (9%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYS 60
+YA Q + I T C G L R +F+ P+ R V +N M+ GY+
Sbjct: 65 VYARQLFEEIPNPDAIARTTLITAYCAL-GNLELGREIFNGTPLYMRDSVFYNAMITGYA 123
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ-LNSLIDGKQIHCLVLKSGYECFE 119
+L L M R + + ++ TF+++LS + + Q+HC V+K+G C
Sbjct: 124 HNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVS 183
Query: 120 F-VGSGLLFFYAN--------CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAF 170
V + LL Y C + A+++FDE+ + +EL W+ M+ GYV+ + ++ A
Sbjct: 184 SSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAR 243
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+VF M + W +ISGY GC ++AL L R MR G ++ T+ ++I ACA
Sbjct: 244 EVFEAMVENLGAAWNAMISGYVHC--GCFQEALTLCRKMRFLGIQF-DDITYTTIISACA 300
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
+G+F GK +H ++K + S CL+ SN+
Sbjct: 301 NVGSFQMGKQMHAYILKNELNPNHSF---------------------------CLSVSNA 333
Query: 290 LINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
LI ++++A IF + N I++N+++ GY G+++++K FE+MP +++++L
Sbjct: 334 LITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTL 393
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
MIS G QN ++ L+L+ MR + F+ ACS
Sbjct: 394 TVMIS-----------------GLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACS 436
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
LG+L+ G+ LHA LV +ES++ VG +++ MY++CG + A++ F ++ S ++ +W +
Sbjct: 437 VLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNS 496
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSY 528
++ HG G +A+ LF+ ML++ + P+ TF+ VL+AC AGLV +G F SM +SY
Sbjct: 497 MIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESY 556
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P +HY +VDL R+G A I MP + A VW ALL+ C NM++G A
Sbjct: 557 GITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEA 616
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A+++F L + YV+LSNIYA +G+W +RK + V+K+P CSWIE+ ++VH
Sbjct: 617 AEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHV 676
Query: 649 FSVEDRNNPNCNVIYATLEHL 669
F V+D +P +Y LE L
Sbjct: 677 FMVDDDVHPEVLSVYRYLEQL 697
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 166/401 (41%), Gaps = 104/401 (25%)
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
+F + VH +I GF+ L+E YC A ++++ + NP A +LI
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLI 86
Query: 292 NGLISMGRIEDAELIFN--RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH------ 343
++G +E IFN L +S+ YN+MI GYA G + LF M
Sbjct: 87 TAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPD 146
Query: 344 ----RSIIS-------------------------------LNTMISV---------IP-- 357
S++S LN ++SV IP
Sbjct: 147 DFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCS 206
Query: 358 ----------EM-ERNPVTWNSMISGYVQNN---------------------------LH 379
EM +R+ +TW +MI+GYV+N+ +H
Sbjct: 207 AMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVH 266
Query: 380 ----EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN--- 432
++AL L MR L I T++ + AC+ +GS Q G+ +HA+++K N
Sbjct: 267 CGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSF 326
Query: 433 -VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+ V +L+ +Y + +++A+ F ++ N+ W A+++GY + G EA FE M
Sbjct: 327 CLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEM- 385
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
V N T ++S + G +EG+K+F+ M+ G P
Sbjct: 386 ---PVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEP 423
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 173/421 (41%), Gaps = 91/421 (21%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKF--------------- 65
+N IT +N ++ AR +F MP+R +++WN +L GY +
Sbjct: 331 SNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL 390
Query: 66 ----------------DESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCL 109
DE L L M + + F+ L+ C+ L +L +G+Q+H
Sbjct: 391 LTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQ 450
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
++ GYE VG+ ++ YA C +E A+
Sbjct: 451 LVHLGYESSLSVGNAMISMYAKCGVVEAAE------------------------------ 480
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
VF+ MP D+V W +I+ + G KA++LF M + G P+ TF +V+ AC+
Sbjct: 481 -SVFVTMPSVDLVSWNSMIAALGQHGHGV-KAIELFDQMLKEGV-FPDRITFLTVLTACS 537
Query: 230 RLGAFCEGK-VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN----PCL 284
G +G+ + +L G E +++ +C F A V D + + P
Sbjct: 538 HAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVW 597
Query: 285 NA--SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
A + I+G + +G IE AE +F +L N +Y + YA G+ +D ++ + M
Sbjct: 598 EALLAGCRIHGNMDLG-IEAAEQLF-KLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMR 655
Query: 343 HRSIISLNTMISVIPEMERNPV-TW----NSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
+++ + P +W N + V +++H + L +Y + +L ++
Sbjct: 656 DQAV-------------RKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMK 702
Query: 398 R 398
+
Sbjct: 703 K 703
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 128/318 (40%), Gaps = 62/318 (19%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV----------------IPEMERN 362
N +++ Y V +++LFE++P+ I+ T+I+ P R+
Sbjct: 52 NRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRD 111
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF-SVLFHACSCLGSLQQGQLLH 421
V +N+MI+GY N AL+L+ MR+ TF SVL +G+ QQ +H
Sbjct: 112 SVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMH 171
Query: 422 AHLVKTPFES----------NVYVG------------------------------TSLVD 441
+VKT +VYV T+++
Sbjct: 172 CAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMIT 231
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
Y R +N A+ F ++ AAW A+++GY H G EA+ L M I + T
Sbjct: 232 GYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDIT 291
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT----LEHYTCVVDLLGRSGHLHEAEEFI 557
+ ++SAC G G ++ + + P L ++ L ++ + EA +
Sbjct: 292 YTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIF 351
Query: 558 KDMPIELDAVVWGALLSA 575
MP+ + + W A+LS
Sbjct: 352 YAMPVR-NIITWNAILSG 368
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 223/675 (33%), Positives = 351/675 (52%), Gaps = 64/675 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++G + AR +FD +P ++ V+W TM+ G K + SL L + NV + ST
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILST 254
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C+ L L GKQIH +L+ G E +
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEM-------------------------------D 283
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
L ++++ YV+C + A +F MP K+++ WT L+SGY ++ E A++LF M
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE-AMELFTSMS 342
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+ G P+ Y S++ +CA L A G VH IK D + +LI+ Y C+
Sbjct: 343 KFGLK-PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMG---RIEDAELIFN----RLTEANSISYNSMI 322
A +V+D + N++I G +G + +A IF RL + +++ S++
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 323 KGYAVYGQVDDSKR----LFEKMPHRSIISLNTMISV-------------IPEME-RNPV 364
+ A + SK+ +F+ + I + + +I V EM+ ++ V
Sbjct: 462 RASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLV 521
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACSCLGSLQQGQLLH 421
WNSM +GYVQ + +E+AL L++ +L + R R TF+ + A L S+Q GQ H
Sbjct: 522 IWNSMFAGYVQQSENEEALNLFL---ELQLSRERPDEFTFANMVTAAGNLASVQLGQEFH 578
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
L+K E N Y+ +L+DMY++CGS DA +F S +S +V W ++++ Y++HG G
Sbjct: 579 CQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGK 638
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
+A+ + E M+ + I PN TFVGVLSAC AGLV +G+K F M +G+ P EHY C+V
Sbjct: 639 KALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMV 698
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
LLGR+G L++A E I+ MP + A+VW +LLS C N+E+ E AA+ D K
Sbjct: 699 SLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSG 758
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNV 661
++ +LSNIYA G W + +R+R+ V K+PG SWI +N VH F +D+++ N
Sbjct: 759 SFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQ 818
Query: 662 IYATLEHLTANLNSV 676
IY L+ L + V
Sbjct: 819 IYEVLDDLLVQIRGV 833
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 131/565 (23%), Positives = 235/565 (41%), Gaps = 127/565 (22%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I R G +V AR +F++MP R +VSW+TM+ + ++ESL + R+
Sbjct: 82 SNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRK 141
Query: 81 -KLNETTFSTILSVCAQLNSLIDGK------QIHCLVLKSGYECFEFVGSGLLFFYANCF 133
NE S+ + C+ L DG+ Q+ ++KSG++ +VG+ L+ FY
Sbjct: 142 DSPNEYILSSFIQACSGL----DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDG 197
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
I+ A+ VFD L E + + W+ M+ G V+ + +F ++ + +VV
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV----------- 246
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
P+ Y +V+ AC+ L GK +H +++ G E D
Sbjct: 247 ----------------------PDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
S+ LI+ Y C GR+ A +FN +
Sbjct: 285 SLMNVLIDSYVKC-------------------------------GRVIAAHKLFNGMPNK 313
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
N IS+ +++ GY
Sbjct: 314 NIISWTTLLSGYK----------------------------------------------- 326
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
QN LH++A++L+ +M K + S + +C+ L +L G +HA+ +K ++
Sbjct: 327 -QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDS 385
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG---SEAVLLFEIM 490
YV SL+DMY++C + DA+ F ++ +V + A++ GYS G EA+ +F M
Sbjct: 386 YVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM 445
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
+ I P+ TFV +L A + +I M YG+ + + ++D+ L
Sbjct: 446 RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCL 505
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
++ +M ++ D V+W ++ +
Sbjct: 506 KDSRLVFDEMKVK-DLVIWNSMFAG 529
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 210/492 (42%), Gaps = 87/492 (17%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA---KFDESLSLVSTMHR 77
TN I + L AR +FD VV +N M+ GYS+ + E+L++ M
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ + TF ++L A L SL KQIH L+ K G F GS L+ Y+NC+ +++
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
++ VFDE+ + ++W+ M GYVQ + +A ++F++
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE---------------------- 545
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
L+L R P+E+TF +++ A L + G+ H L+K G E + I
Sbjct: 546 ----LQLSR-------ERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL++ Y C G EDA F+ + +
Sbjct: 595 ALLDMYAKC-------------------------------GSPEDAHKAFDSAASRDVVC 623
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+NS+I YA +G+ + ++ EKM I E N +T+ ++S
Sbjct: 624 WNSVISSYANHGEGKKALQMLEKMMSEGI-------------EPNYITFVGVLSACSHAG 670
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
L E L+ + M + I+ + + G L + + L + K P + V
Sbjct: 671 LVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKAREL---IEKMPTKPAAIVWR 727
Query: 438 SLVDMYSRCGSINDAQ--ASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
SL+ ++ G++ A+ A + +S P + ++T L N Y+ G+ +EA + E M +
Sbjct: 728 SLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEG 787
Query: 495 IVPNAA-TFVGV 505
+V +++G+
Sbjct: 788 VVKEPGRSWIGI 799
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 21/267 (7%)
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
E ++ N +I Y+ G + ++++FEKMP ERN V+W++M+S
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMP-----------------ERNLVSWSTMVS 118
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQL--LHAHLVKTP 428
+ ++E++L +++ + D S ACS L + + L + LVK+
Sbjct: 119 ACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSG 178
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
F+ +VYVGT L+D Y + G+I+ A+ F ++ + WT +++G G ++ LF
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFY 238
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548
++E ++VP+ VLSAC + G +I + YG+ ++D + G
Sbjct: 239 QLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSA 575
+ A + MP + + + W LLS
Sbjct: 299 RVIAAHKLFNGMPNK-NIISWTTLLSG 324
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 161/381 (42%), Gaps = 68/381 (17%)
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
VVHG +I G E D + LI Y A +V++++ L + +++++ G
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 299 RIEDAELIF-----NRLTEANSISYNSMIKG----------------------------- 324
E++ ++F R N +S I+
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 325 --------YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
Y G +D ++ +F+ +P E++ VTW +MISG V+
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALP-----------------EKSTVTWTTMISGCVKM 227
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
+LQL+ + + + S + ACS L L+ G+ +HAH+++ E + +
Sbjct: 228 GRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM 287
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
L+D Y +CG + A F+ + + N+ +WT L++GY + L EA+ LF M + +
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHE 552
P+ +L++C + G ++ +Y + L + + V +D+ + L +
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQV----HAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 553 AEEFIKDMPIELDAVVWGALL 573
A + + D+ D V++ A++
Sbjct: 404 ARK-VFDIFAAADVVLFNAMI 423
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
R R F+ L + L ++H ++ E + Y+ L+++YSR G + A+
Sbjct: 42 RGRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKV 101
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGL 514
F + N+ +W+ +++ +HHG+ E++++F E + PN + AC +GL
Sbjct: 102 FEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGL 159
Query: 515 VNEGMKIFRSMKSYGVVPTLEH----YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
G + ++S+ V + T ++D + G++ A +P E V W
Sbjct: 160 DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWT 218
Query: 571 ALLSAC 576
++S C
Sbjct: 219 TMISGC 224
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 223/703 (31%), Positives = 341/703 (48%), Gaps = 78/703 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N I+ +GQ+ A LF++MP R VSWN+M+ GY
Sbjct: 70 VYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGY------------------ 111
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + L L Q+H K + V + +L Y C ++
Sbjct: 112 ----FHNGELEATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDF 167
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++VF + W+ M+ GY + + A ++F KMP++D V W +IS ++ G
Sbjct: 168 AQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFG 227
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E L F M G PN T+ SV+ AC + G +H +++ D G
Sbjct: 228 AE-TLNTFLEMWNQGFR-PNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGC 285
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----- 312
LI+ Y C + A +V+D L + SLI G+ G E+A ++FN++ E
Sbjct: 286 GLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVAS 345
Query: 313 -------------------------ANSISY---------NSMIKGYAVYGQVDDSKRLF 338
A++I+ N+++ YA G V + F
Sbjct: 346 DQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAF 405
Query: 339 EKMPHRSIISLNTMISVIPEM--------------ERNPVTWNSMISGYVQNNLHEKALQ 384
E MP R IIS MI+ + ERN ++WNSM++ Y+Q E+ L+
Sbjct: 406 ELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLK 465
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
+Y+ M + + TFS AC+ L L G + A K F SNV V S+V MYS
Sbjct: 466 VYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYS 525
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
RCG I +AQ FSSI N+ +W A+M GY+ +G G + + +FE ML VP+ ++V
Sbjct: 526 RCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVS 585
Query: 505 VLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
VLS C +G V+EG F SM K +G+ P EH+ C+VDLLGR+G L +A+ I MP +
Sbjct: 586 VLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFK 645
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
+A +WGALL+AC N ++ E A + + LD + +Y +L+NIY+ GK ++R
Sbjct: 646 PNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVR 705
Query: 624 KRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
K + V+K+PGCSWIE+++RVH F+V+D N+P ++ L
Sbjct: 706 KLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 748
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 246/562 (43%), Gaps = 80/562 (14%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
F + CA L S+ +++H ++ G + F+ + LL Y+NC I +A RVF +
Sbjct: 7 FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIM 66
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
N W+ M+ G+ M +A +F KMP++D V W ++SGY
Sbjct: 67 FPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYF-------------- 112
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
+GE ++ I+A LG +HG K F D + ++++ Y C
Sbjct: 113 ---HNGE-------LEATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKC 162
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
A D A +V+ R NP L +NSMI GY+
Sbjct: 163 GAMDFAQKVFCRTPNPSL-------------------------------FCWNSMIYGYS 191
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
YG V + LF KMP ER+ V+WN+MIS Q+ + L +
Sbjct: 192 KYGSVKKALELFAKMP-----------------ERDTVSWNTMISILSQHGFGAETLNTF 234
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
+ M T++ + AC+ + L+ G LHA +V+ +VY G L+DMY++C
Sbjct: 235 LEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKC 294
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G + A+ F ++ N +WT+L+ G + G EA++LF M E + + T VL
Sbjct: 295 GRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVL 354
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
C+ ++ G ++ + G+ ++ +V + + G + +A + MPI D
Sbjct: 355 GVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIR-DI 413
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
+ W A+++A F +V E+A + + ++ + ++ + Y G W + + + ++
Sbjct: 414 ISWTAMITA--FSQAGDV-EKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQM 470
Query: 627 THLEVKKDPGCSWIELNSRVHA 648
VK D WI ++ + A
Sbjct: 471 LREGVKTD----WITFSTSISA 488
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 207/638 (32%), Positives = 327/638 (51%), Gaps = 85/638 (13%)
Query: 39 NLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNETTFSTILSVCAQL 97
LF MP R VS+N ++ G+S S+ L + R +V+ T S ++ V + L
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159
Query: 98 NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
+ G +HC VL+ G+ + FVGS L+ YA I +A+RVF E+ ++++ ++
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMP 216
G ++C ++ DA +F M +D + WT +++G + +G + +AL +FR MR G +
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ--NGLQLEALDVFRRMRAEGVGI- 276
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
++YTF S++ AC L A EGK +H + + +E + +G AL++ Y C +
Sbjct: 277 DQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRS-------- 328
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
I AE +F R+T N IS+ +MI GY +++ R
Sbjct: 329 -----------------------IRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
F +M M + P + T S+IS
Sbjct: 366 AFSEM---------QMDGIKP----DDFTLGSVIS------------------------- 387
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+C+ L SL++G H + + + V +LV +Y +CGSI DA F
Sbjct: 388 ----------SCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLF 437
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+S + +WTAL+ GY+ G E + LFE ML + P+ TF+GVLSAC RAGLV
Sbjct: 438 DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVE 497
Query: 517 EGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+G F SM K +G+VP +HYTC++DL RSG EAEEFIK MP DA W LLS+
Sbjct: 498 KGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Query: 576 CWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
C NME+G+ AA+ + D + ++YV+L +++A G+W + +R+ + +VKK+P
Sbjct: 558 CRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEP 617
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
GCSWI+ ++VH FS +D+++P + IY LE L + +
Sbjct: 618 GCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 124/515 (24%), Positives = 207/515 (40%), Gaps = 115/515 (22%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N IT R + A+ LF M R ++W TM+ G ++ E+L + M
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V +++ TF +IL+ C L +L +GKQIH + ++ YE FVGS L+ Y+ C I
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VF + N + W+ M+VGY Q +
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQ---------------------------------NA 358
Query: 198 C-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
C E+A++ F M+ G P+++T SVI +CA L + EG H L + G ++
Sbjct: 359 CSEEAVRAFSEMQMDGIK-PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVS 417
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
AL+ Y C G IEDA +F+ ++ + +
Sbjct: 418 NALVTLYGKC-------------------------------GSIEDAHRLFDEMSFHDQV 446
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S+ +++ GYA +G+ ++ LFEKM + ++ + VT+ ++S +
Sbjct: 447 SWTALVTGYAQFGKAKETIDLFEKM-------------LANGLKPDGVTFIGVLSACSRA 493
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
L EK C S+Q+ + P + +
Sbjct: 494 GLVEK-------------------------GCDYFDSMQKDHGI------VPIDDHY--- 519
Query: 437 TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
T ++D+YSR G +A+ + SP+ W L++ G E +LE D
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETD- 578
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
N A++V + S G E + R M+ V
Sbjct: 579 PQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 208/661 (31%), Positives = 347/661 (52%), Gaps = 56/661 (8%)
Query: 39 NLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLN 98
F MP + VSW+ ++ G + L L M ++ V ++++TF+++ CA L+
Sbjct: 230 QFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLS 289
Query: 99 SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLV 158
+L G Q+H LK+ + +G+ L Y
Sbjct: 290 ALRLGSQLHGHALKTDFGTDVVIGTATLDMY----------------------------- 320
Query: 159 GYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
++CN +SDA +F +P ++ + +I GYA+S G E AL +FR +++SG + +E
Sbjct: 321 --MKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIE-ALGMFRLLQKSGLGL-DE 376
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
+ RACA + EG VHGL +K + + + A+++ Y C A A V++
Sbjct: 377 VSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEE 436
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIF----NRLTEANSISYNSMIK----------G 324
+ + + N++I G E +F E + +Y S++K G
Sbjct: 437 MVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCG 496
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER--------NPVTWNSMISGYVQN 376
++ ++ S+ + ++I + + ++ + E+ V+WN++ISG+
Sbjct: 497 MEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQ 556
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
E+A + + M ++ +D T++ + C+ L +++ G+ +HA ++K +S+ Y+
Sbjct: 557 KQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYIS 616
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
++LVDMYS+CG++ D Q F + + W A++ GY+ HGLG EA+ +FE M +++
Sbjct: 617 STLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVK 676
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
PN ATF+ VL AC GLV +G+ F SM S YG+ P LEHY+CVVD++GRSG + +A E
Sbjct: 677 PNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALE 736
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
I+ MP E DAV+W LLS C N+EV E+AA + L+ + +AYV+LSNIYA G
Sbjct: 737 LIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGM 796
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
W + +RK + +KK+PGCSWIE+ S VHAF V D+ +P IY L+ LT +
Sbjct: 797 WNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKW 856
Query: 676 V 676
V
Sbjct: 857 V 857
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 157/614 (25%), Positives = 272/614 (44%), Gaps = 70/614 (11%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N + G + A+ LFD MP R VVSWN+++ GY + + + M R
Sbjct: 109 VSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRM 168
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ TTF+ +L C+ L G QIH L +K G++C GS LL YA C +++ +
Sbjct: 169 GTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCS 228
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ F + E N + WS ++ G VQ D
Sbjct: 229 IQFFHSMPEKNWVSWSAIIAGCVQ--------------------------------NDDL 256
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
L+LF+ M+++G + ++ TF SV R+CA L A G +HG +K F D IG A
Sbjct: 257 RGGLELFKEMQKAGVGV-SQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTA 315
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----N 314
++ Y C A ++++ L N L + N++I G + +A +F L ++ +
Sbjct: 316 TLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLD 375
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS------------------VI 356
+S + + AV + D + +S+ N ++ V
Sbjct: 376 EVSLSGAFRACAVI-KGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVF 434
Query: 357 PEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
EM R+ V+WN++I+ + QN EK L L++ M + ++ T+ + AC+ +L
Sbjct: 435 EEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALN 494
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G +H ++K+ + +VG +L+DMYS+CG + A+ ++ V +W A+++G+S
Sbjct: 495 CGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFS 554
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
EA F MLE + P+ T+ +L C V G +I + +
Sbjct: 555 LQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAY 614
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
+ +VD+ + G++ + + + P D V W A++ C + AQ G
Sbjct: 615 ISSTLVDMYSKCGNMQDFQLIFEKAP-NRDFVTWNAMV--CGY----------AQHGLGE 661
Query: 596 DKKPISAYVILSNI 609
+ I Y+ L N+
Sbjct: 662 EALKIFEYMQLENV 675
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 157/622 (25%), Positives = 292/622 (46%), Gaps = 48/622 (7%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
T+R+LF PIR ++ SK +S S+ + K + TFS I C+
Sbjct: 5 TSRHLF---PIRFFFNFQ------SKSPFKTLPISPFSSYQATPTK--KKTFSHIFQECS 53
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+L GKQ H ++ + ++ FV + L+ Y C ++E A +VFD + + + + W+
Sbjct: 54 DRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNA 113
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
ML GY + A +F MP++DVV W LISGY + D K + +F M G +
Sbjct: 114 MLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDH-RKVIDVFLQMGRMG-TV 171
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+ TF V+++C+ L G +HGL +K GF+ D G AL++ Y C+ D +++
Sbjct: 172 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQF 231
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-------------------NSI 316
+ + + +++I G + + +F + +A +++
Sbjct: 232 FHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSAL 291
Query: 317 SYNSMIKGYAV---YGQ--VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
S + G+A+ +G V + L M ++ + + +P N ++N++I
Sbjct: 292 RLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLP--NHNLQSYNAIIV 349
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
GY +++ +AL ++ ++K + + S F AC+ + +G +H +K+ +S
Sbjct: 350 GYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQS 409
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
N+ V +++DMY +CG++ +A F + S + +W A++ + +G + + LF ML
Sbjct: 410 NICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWML 469
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIF-RSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
+ + P+ T+ VL AC +N GM+I R +KS + + ++D+ + G +
Sbjct: 470 QSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVG-IALIDMYSKCGMM 528
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF--GLDKKPISAYVIL-- 606
+AE+ + D E V W A++S E ++ KM G+D + IL
Sbjct: 529 EKAEK-LHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDT 587
Query: 607 -SNIYAV-LGKWGKKMDIRKRL 626
+N+ V LGK I+K L
Sbjct: 588 CANLVTVELGKQIHAQIIKKEL 609
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 207/477 (43%), Gaps = 84/477 (17%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I N + G+ G LV A +F++M R VSWN ++ + + +++LSL M +
Sbjct: 411 ICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQ 470
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S ++ +E T+ ++L CA +L G +IH ++KS FVG L+ Y+ C +E+
Sbjct: 471 SGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEK 530
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+++ D L E + VV W +ISG++
Sbjct: 531 AEKLHDRLAE-------------------------------QTVVSWNAIISGFSLQKQS 559
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E+A K F M E G + P+ +T+ +++ CA L GK +H +IK + D I
Sbjct: 560 -EEAQKTFSKMLEMGVD-PDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISS 617
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
L++ Y C G ++D +LIF + + ++
Sbjct: 618 TLVDMYSKC-------------------------------GNMQDFQLIFEKAPNRDFVT 646
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+N+M+ GYA +G +++ ++FE M + ++ N T+ +++
Sbjct: 647 WNAMVCGYAQHGLGEEALKIFEYMQ-------------LENVKPNHATFLAVLRACGHMG 693
Query: 378 LHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
L EK L + +M +D +S + G + + L + PFE++ +
Sbjct: 694 LVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL---IEGMPFEADAVIW 750
Query: 437 TSLVDMYSRCGSINDAQASFSSI---SSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+L+ + G++ A+ + SI + AA+ L N Y++ G+ +E L ++M
Sbjct: 751 RTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMM 807
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 202/658 (30%), Positives = 352/658 (53%), Gaps = 26/658 (3%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
GR L A +F +MP + WN + + K + + L M S +K T
Sbjct: 179 GRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIV 238
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L C ++ +L KQIH V + G + + + L+ Y+ ++E A+RVFD +
Sbjct: 239 RVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENR 298
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGC-EKALK 203
N W+ M+ Y ++DA+ +F ++ K D+V W L+SG+ + G E+ L
Sbjct: 299 NTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHF--LHGYKEEVLN 356
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
+ + M+ G PN + SV++A + LG GK HG +++ GF+ D +G +LI+ Y
Sbjct: 357 ILQRMQGEGFK-PNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMY 415
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYN 319
+ A V+D ++N + A NSL++G G EDA + N++ + + +++N
Sbjct: 416 VKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWN 475
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
MI GYA++G ++ +++ + + P N V+W ++ISG Q +
Sbjct: 476 GMISGYAMWGCGKEA---------LAVLHQTKSLGLTP----NVVSWTALISGSSQAGNN 522
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
+L+ + M++ + ++ + L AC+ L LQ+G+ +H ++ F +V+V T+L
Sbjct: 523 RDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATAL 582
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+DMYS+ S+ +A F I + +A+W ++ G++ GLG EA+ +F M + + P+A
Sbjct: 583 IDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDA 642
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
TF +LSAC +GL+ EG K F SM Y +VP LEHY C+VDLLGR+G+L EA + I
Sbjct: 643 ITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIH 702
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
MP++ DA +WGALL +C N++ E AA+ +F L+ + Y+++ N+Y++ +W
Sbjct: 703 TMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWED 762
Query: 619 KMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+R+ + V+ SWI++N RVH FS +++ +P+ IY L L + + +
Sbjct: 763 MDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKL 820
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/545 (22%), Positives = 237/545 (43%), Gaps = 72/545 (13%)
Query: 47 RTVVSWNTMLCGY-SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQ 105
R + WN+ + + S L + +H V + +S L C ++ + G +
Sbjct: 95 RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGME 154
Query: 106 IHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNL 165
IH ++K G++ ++ L+ FY C+ +E+A +VF E+ LLW+ ++ NL
Sbjct: 155 IHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAII----LNL 210
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
S+ +K ++LFR M+ S T V+
Sbjct: 211 QSEKL----------------------------QKGVELFRKMQFSFLKAETA-TIVRVL 241
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
+AC ++GA K +HG + + G + D S+ LI Y + A RV+D +EN +
Sbjct: 242 QACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTS 301
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTEANS----ISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ NS+I+ ++G + DA +F L ++ +++N ++ G+ ++G ++ + ++M
Sbjct: 302 SWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRM 361
Query: 342 ------PHRSIISLNTMISVIPEME-------------RNPVTWN-----SMISGYVQNN 377
P+ S S+ +++ I E+ RN + S+I YV+N+
Sbjct: 362 QGEGFKPNSS--SMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNH 419
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
A ++ M+ +R ++ L S G + L + K + ++
Sbjct: 420 SLTSAQAVFDNMK----NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWN 475
Query: 438 SLVDMYSRCGSINDAQASFSSISS----PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
++ Y+ G +A A S PNV +WTAL++G S G +++ F M ++
Sbjct: 476 GMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQE 535
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
++PN+A+ +L AC L+ +G +I G + + T ++D+ +S L A
Sbjct: 536 GVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNA 595
Query: 554 EEFIK 558
+ +
Sbjct: 596 HKVFR 600
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 175/399 (43%), Gaps = 82/399 (20%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS-------KWAKF--------- 65
N I+ +NG+L AR +FD M R SWN+M+ Y+ W+ F
Sbjct: 273 NPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMK 332
Query: 66 -------------------DESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
+E L+++ M K N ++ +++L ++L L GK+
Sbjct: 333 PDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKET 392
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H VL++G++C +VG+ L+ Y + A+ VFD + N W+ ++ GY +
Sbjct: 393 HGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMF 452
Query: 167 SDAFDVFIKMPKK----DVVVWTKLISGYAKSVDGCEK---------------------- 200
DA + +M K+ D+V W +ISGYA + GC K
Sbjct: 453 EDALRLLNQMEKEGIKPDLVTWNGMISGYA--MWGCGKEALAVLHQTKSLGLTPNVVSWT 510
Query: 201 --------------ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
+LK F M++ G MPN + ++RACA L +GK +H L I+
Sbjct: 511 ALISGSSQAGNNRDSLKFFAQMQQEGV-MPNSASITCLLRACASLSLLQKGKEIHCLSIR 569
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
GF D + ALI+ Y + A +V+ R++N L + N +I G G ++A +
Sbjct: 570 NGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISV 629
Query: 307 FNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
FN + + ++I++ +++ G + + + F+ M
Sbjct: 630 FNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSM 668
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 216/676 (31%), Positives = 346/676 (51%), Gaps = 82/676 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++ N+AIT R G++ A LF MP R+ ++NTML GY+ + ++LS ++ R
Sbjct: 107 VIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR 166
Query: 78 S-----NVKLNETTFSTILSVCAQL------------NSLIDGKQIHCLV-LKSGY---- 115
N L+ S+ L+ L N +I H LV L Y
Sbjct: 167 PDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLA 226
Query: 116 -ECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI 174
E +G+L Y I+EA+ +FD E + + W+ ++ GYVQ + + +A +F
Sbjct: 227 PEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFN 286
Query: 175 KMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAF 234
KMP++DVV W ++SGYA+ D E A +LF + + +T+ +++ A+ G
Sbjct: 287 KMPQRDVVSWNTMVSGYARRGDMAE-ARRLF-----DVAPIRDVFTWTAIVSGYAQNGML 340
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
E K RV+D + + + N+++
Sbjct: 341 EEAK-----------------------------------RVFDAMPDKNAVSWNAMMAAY 365
Query: 295 ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
+ +E+A+ +F+ + N S+N+M+ GYA G +D+++ +F MP
Sbjct: 366 VQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMP------------ 413
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+++ V+W +M++ Y Q E+ LQL+ M + RS F+ + C+ + +L
Sbjct: 414 -----QKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAAL 468
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ G LH+ L+K + +VG +L+ MY +CGS+ +A ++F + +V +W ++ GY
Sbjct: 469 ECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGY 528
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPT 533
+ HG G EA+ +F+ M + P+ T VGVL+AC +GLV +G+ F SM + +GV
Sbjct: 529 ARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATK 588
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
EHYTC++DLLGR+G L EA +KDMP E D+ +WGALL A N E+G AA+K+F
Sbjct: 589 PEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIF 648
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
L+ + YV+LSNIYA GKW +R + VKK PG SWIE+ ++VH FSV D
Sbjct: 649 ELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGD 708
Query: 654 RNNPNCNVIYATLEHL 669
+P IYA LE L
Sbjct: 709 SVHPEREDIYAFLEDL 724
>gi|15228064|ref|NP_181235.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206293|sp|Q9SJK9.1|PP189_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g36980, mitochondrial; Flags: Precursor
gi|4883614|gb|AAD31583.1| hypothetical protein [Arabidopsis thaliana]
gi|330254236|gb|AEC09330.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 625
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 208/671 (30%), Positives = 346/671 (51%), Gaps = 73/671 (10%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
+++V I ++G++ +AR +FD MP V+WNTML YS+ E+++L + +
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
S+ K ++ +F+ ILS CA L ++ G++I LV++SG+ V + L+ Y C +
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 136 EEAKRVFDELHED--NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
A +VF ++ D NE+ W +L Y+ A DVF++MPK+ W +ISG+A
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC-ARLGAFCEGKVVHGLLIKCGFEFD 252
E L LF+ M ES E P+ YTF S++ AC A G++VH +++K G+
Sbjct: 182 -CGKLESCLSLFKEMLES-EFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSA 239
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+++ FY + D AMR + +E LT+
Sbjct: 240 VEAKNSVLSFYTKLGSRDDAMRELESIE----------------------------VLTQ 271
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
+S+NS+I G+ + + +F P E+N VTW +MI+G
Sbjct: 272 ---VSWNSIIDACMKIGETEKALEVFHLAP-----------------EKNIVTWTTMITG 311
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
Y +N E+AL+ ++ M K +D + + HACS L L G+++H L+ F+
Sbjct: 312 YGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGY 371
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
YVG +LV++Y++CG I +A +F I++ ++ +W ++ + HGL +A+ L++ M+
Sbjct: 372 AYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIA 431
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
I P+ TF+G+L+ C +GLV EG IF SM K Y + ++H TC++D+ GR GHL
Sbjct: 432 SGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLA 491
Query: 552 EAEEFIKDMPIELDAVV--------WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
EA KD+ ++V W LL AC + E+G ++ + + ++
Sbjct: 492 EA----KDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSF 547
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
V+LSN+Y G+W + D+R+ + +KK PGCSWIE+ ++V F V D ++P
Sbjct: 548 VLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPR----- 602
Query: 664 ATLEHLTANLN 674
LE L+ LN
Sbjct: 603 --LEELSETLN 611
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 213/657 (32%), Positives = 326/657 (49%), Gaps = 59/657 (8%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N I+ + G +R L +MP VSW ++ GY+++ FD ++ + + M
Sbjct: 78 SWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISER 137
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V ++ T S +LS CA +L G++IH V+K G V + LL YA C + AK
Sbjct: 138 VPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAK 197
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VFD + N W+ ++ Y+Q A F KMP +D+V W +ISGY++ E
Sbjct: 198 VVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLE 257
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
AL +F M P+ +T S++ ACA L GK +H +++ E ++G AL
Sbjct: 258 -ALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNAL 316
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF--NRLTEANSIS 317
I Y G +E A LI NR + N I+
Sbjct: 317 ISMYAKS-------------------------------GGVEIARLIVEHNRTSNLNIIA 345
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+ S++ GY G V ++ +F K+ +R+ V W +MI GYVQN
Sbjct: 346 FTSLLDGYTKLGNVKPAREIFNKL-----------------RDRDVVAWTAMIVGYVQNG 388
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
L AL+L+ M + T + + S L L+ G+ +HA +K S V
Sbjct: 389 LWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN 448
Query: 438 SLVDMYSRCGSINDAQASFSSISSPN----VAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+L+ MY++ G+IN A+ F PN + +WT+++ + HGLG EA+ LFE ML
Sbjct: 449 ALIAMYAKTGNINVAKRVFDL---PNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHE 552
+ P+ T+VGVLSAC GLV +G K + M + + PTL HY C++DL GR+G L E
Sbjct: 506 GMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQE 565
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A FI+ MPIE D + WG+LL++C N ++ + AA+++ +D AY+ L+N+Y+
Sbjct: 566 AYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSA 625
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
GKW RK + V+K+ G SWI + + VHAF VED +P + IY + +
Sbjct: 626 CGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEI 682
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 152/600 (25%), Positives = 255/600 (42%), Gaps = 95/600 (15%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK-------------------- 61
N +T + G L A ++FD+MP+++ SWNT++ GY+K
Sbjct: 49 NNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPV 108
Query: 62 -WAK----------FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLV 110
W FD ++ + + M V ++ T S +LS CA +L G++IH V
Sbjct: 109 SWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFV 168
Query: 111 LKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAF 170
+K G V + LL YA C + AK VFD + N W+ ++ Y+Q A
Sbjct: 169 VKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAA 228
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACAR 230
F KMP +D+V W +ISGY++ E AL +F M P+ +T S++ ACA
Sbjct: 229 SQFEKMPDRDIVSWNSMISGYSQQGYNLE-ALAIFSKMLNEPSLKPDNFTLASILSACAN 287
Query: 231 LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV--YDRLENPCLNASN 288
L GK +H +++ E ++G ALI Y + A + ++R N + A
Sbjct: 288 LEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFT 347
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM----PHR 344
SL++G +G ++ A IFN+L + + +++ +MI GY G +D+ LF M P
Sbjct: 348 SLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEP 407
Query: 345 SIISLNTMISV------------------------------------------------- 355
+ +L M+SV
Sbjct: 408 NSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVF 467
Query: 356 -IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+P ++ V+W SMI Q+ L ++A+ L+ M + + T+ + AC+ +G +
Sbjct: 468 DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLV 527
Query: 415 QQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMN 472
+QG+ + + + E + ++D+Y R G + +A S+ P+ AW +L+
Sbjct: 528 EQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLA 587
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAA--TFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
H A + E +L D + A V SAC G + + MK GV
Sbjct: 588 SCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC---GKWENAAQTRKLMKDRGV 644
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 236/502 (47%), Gaps = 18/502 (3%)
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M N + F+ IL ++ G+ +HC ++K G ++ + L+ FYA
Sbjct: 1 MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+ A VFDE+ + W+ ++ GY + + + +MP D V WT +I GY +
Sbjct: 61 LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQ- 119
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ A+ +F M S P+++T +V+ +CA G+ +H ++K G
Sbjct: 120 FGLFDNAIWMFAKMI-SERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVP 178
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+ +L+ Y C A V+DR+ ++ N+LI+ + G+ E A F ++ + +
Sbjct: 179 VATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRD 238
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
+S+NSMI GY+ G ++ +F KM LN P ++ + T S++S
Sbjct: 239 IVSWNSMISGYSQQGYNLEALAIFSKM-------LNE-----PSLKPDNFTLASILSACA 286
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
Q++ + + + + + + L + G ++ +L+ H + N+
Sbjct: 287 NLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNL--NII 344
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
TSL+D Y++ G++ A+ F+ + +V AWTA++ GY +GL ++A+ LF +M+ +
Sbjct: 345 AFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEG 404
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
PN+ T +LS ++ G +I S G T ++ + ++G+++ A+
Sbjct: 405 PEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAK 464
Query: 555 EFIKDMPI-ELDAVVWGALLSA 575
+ D+P + + V W +++ A
Sbjct: 465 R-VFDLPNGKKEIVSWTSMIMA 485
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 210/445 (47%), Gaps = 30/445 (6%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-H 76
I + N I+ ++GQ A + F++MP R +VSWN+M+ GYS+ E+L++ S M +
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLN 267
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
++K + T ++ILS CA L L GKQIH +L++ E VG+ L+ YA +E
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327
Query: 137 EAKRVFDELHEDNE--LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
A+ + + N + ++ +L GY + + A ++F K+ +DVV WT +I GY +
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQ- 386
Query: 195 VDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+G AL+LFR M G PN YT +++ + L GK +H IK G
Sbjct: 387 -NGLWNDALELFRLMVNEGPE-PNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTP 444
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRL-- 310
S+ ALI Y + A RV+D S S+I L G ++A +F R+
Sbjct: 445 SVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLS 504
Query: 311 --TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
+ + I+Y ++ G V+ ++ + M++ + E+E +
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYY------------NMMTEVHEIEPTLSHYAC 552
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT- 427
MI Y + L ++A Y+ + + I+ + L +C + ++ L+
Sbjct: 553 MIDLYGRAGLLQEA---YLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLID 609
Query: 428 PFESNVYVGTSLVDMYSRCGSINDA 452
P S Y+ +L ++YS CG +A
Sbjct: 610 PGNSGAYL--ALANVYSACGKWENA 632
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 213/711 (29%), Positives = 345/711 (48%), Gaps = 119/711 (16%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VSTN I+ + G L +AR+LFD MP RTVV+W ++ Y+ FDE+ L M RS
Sbjct: 76 VSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRS 135
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ TF+T+L C Q+H +K G++ F+
Sbjct: 136 CTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFL----------------- 178
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +++L Y + + A +F ++ KD V + LI+GY K DG
Sbjct: 179 ------------TVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEK--DGL 224
Query: 199 -EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+A+ LF MR+SG P+++TF V++A L F G+ +HGL + GF D S+G
Sbjct: 225 YTEAIHLFLKMRQSGHK-PSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGN 283
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
++ FY + R+ + +FN + E + +S
Sbjct: 284 QILHFYSKHD-------------------------------RVLETRNLFNEMPELDFVS 312
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMP----HRSIISLNTMISVIPEM-------------- 359
YN +I Y+ Q ++S LF +M R TM+S+ +
Sbjct: 313 YNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAI 372
Query: 360 -----------------------------------ERNPVTWNSMISGYVQNNLHEKALQ 384
+R+ V+W ++ISGYVQ LH L+
Sbjct: 373 VATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLK 432
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
L+ MR + +STF+ + A + SL G+ LHA ++++ NV+ G+ LVDMY+
Sbjct: 433 LFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 492
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+CGSI DA F + N +W AL++ Y+ +G G A+ F M++ + P++ + +G
Sbjct: 493 KCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILG 552
Query: 505 VLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
VL AC G V +G + F++M YG+ P +HY C++DLLGR+G EAE+ + +MP E
Sbjct: 553 VLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE 612
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK-KPISAYVILSNIYAVLGKWGKKMDI 622
D ++W ++L+AC + N + ERAA+++F ++K + +AYV +SNIYA GKW +
Sbjct: 613 PDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHV 672
Query: 623 RKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+K + +KK P SW+E+N ++H FS D+ +PN + I + LT +
Sbjct: 673 KKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEI 723
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 239/500 (47%), Gaps = 35/500 (7%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++ A +V+DE+ N + + M+ GYV+ +S A +F MP + VV WT L+ YA
Sbjct: 59 QVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAG 118
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD- 252
+ + ++A KLFR M S +P+ TF +++ C VH +K GF+ +
Sbjct: 119 N-NHFDEAFKLFRQMCRSC-TLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNL 176
Query: 253 -ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
++ L++ YC D A +++ + + N+LI G G +A +F ++
Sbjct: 177 FLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMR 236
Query: 312 EA----NSISYNSMIKGYAVYGQVD----------------------DSKRLFEKMPHRS 345
++ + +++ ++K AV G D ++ L H
Sbjct: 237 QSGHKPSDFTFSGVLK--AVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDR 294
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
++ + + +PE++ V++N +IS Y Q +E++L L+ M+ + DR F+ +
Sbjct: 295 VLETRNLFNEMPELDF--VSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATML 352
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
+ L SLQ G+ +H + +S ++VG SLVDMY++C ++A+ F S+S +
Sbjct: 353 SIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTV 412
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
+WTAL++GY GL + LF M ++ + +TF VL A + G ++ +
Sbjct: 413 SWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFI 472
Query: 526 KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
G + + + +VD+ + G + +A + ++MP + +AV W AL+SA + E
Sbjct: 473 IRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAYADNGDGEAA 531
Query: 586 ERAAQKMFGLDKKPISAYVI 605
A KM +P S ++
Sbjct: 532 IGAFTKMIQSGLQPDSVSIL 551
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 20/291 (6%)
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
SN + L+ G++ A +++ + N++S N+MI GY G + ++ LF+ MP R++
Sbjct: 47 SNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTV 106
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
VTW ++ Y NN ++A +L+ M + TF+ L
Sbjct: 107 -----------------VTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLP 149
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVY--VGTSLVDMYSRCGSINDAQASFSSISSPNV 464
C+ +HA VK F++N++ V L+ Y ++ A F I +
Sbjct: 150 GCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDS 209
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
+ L+ GY GL +EA+ LF M + P+ TF GVL A V G ++
Sbjct: 210 VTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGL 269
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G ++ + + E +MP ELD V + ++S+
Sbjct: 270 SVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMP-ELDFVSYNVVISS 319
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 160/397 (40%), Gaps = 64/397 (16%)
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
+ V +IK GF D +E A++VYD + + ++N++I+G + M
Sbjct: 29 RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88
Query: 298 GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM---------------- 341
G + A +F+ + + +++ ++ YA D++ +LF +M
Sbjct: 89 GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148
Query: 342 -------PHRSIISL------------------NTMISVIPEMER--------------N 362
P ++ + N ++ E+ R +
Sbjct: 149 PGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKD 208
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
VT+N++I+GY ++ L+ +A+ L++ MR+ + TFS + A L GQ LH
Sbjct: 209 SVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHG 268
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
V T F + VG ++ YS+ + + + F+ + + ++ +++ YS E
Sbjct: 269 LSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEE 328
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV-- 540
++ LF M F +LS + A L +++ R + +V T + V
Sbjct: 329 SLNLFREMQCMGFDRRNFPFATMLS--IAANL--SSLQVGRQVHCQAIVATADSILHVGN 384
Query: 541 --VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
VD+ + EAE K + + V W AL+S
Sbjct: 385 SLVDMYAKCEMFDEAELIFKSLS-QRSTVSWTALISG 420
>gi|357490363|ref|XP_003615469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516804|gb|AES98427.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 404
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 194/381 (50%), Positives = 250/381 (65%), Gaps = 44/381 (11%)
Query: 236 EGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL-ENPCLNASNSLINGL 294
+GKVVHGL IK GF+FD S+ AL EFYC C+A D A RVY+ + C N ++SLI GL
Sbjct: 16 KGKVVHGLYIKDGFDFDNSVSSALAEFYCVCDAVDDAKRVYENMVGEACSNVADSLIGGL 75
Query: 295 ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
+S+GRI++AE+IF L + IS N MIKGYA+ G++ SK+LFEKM + + SLNTMI+
Sbjct: 76 VSIGRIKEAEMIFYGLRDKTLISNNLMIKGYAMSGRIRKSKKLFEKMSLKHLTSLNTMIT 135
Query: 355 VIPEM---------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
V + ERN V+WNSM+SGY+ N H +AL+LY+TMR+ +++ RS
Sbjct: 136 VYSKNGELDEAVKLFDKTKGERNCVSWNSMMSGYIHNGQHSEALKLYVTMRRYSVEYRRS 195
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
TFSVL C+ L S QQGQLLHAHL KTP++ NVYVGT+LVD YS+CG + DAQ SF+SI
Sbjct: 196 TFSVLSGGCAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSI 255
Query: 460 SSPNV-AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
SPNV AAWTAL+NGY++HG A LV+EG
Sbjct: 256 FSPNVAAAWTALINGYAYHGCDLRR--------------------------FHASLVDEG 289
Query: 519 MKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
++ F SM+ +Y V PT+EHYT VVDLLGRSG + EAEEFI PI+ D ++ GALL+A
Sbjct: 290 LEFFHSMQINYRVTPTIEHYTWVVDLLGRSGRVKEAEEFIIQTPIKADGLIRGALLNASC 349
Query: 578 FWMNMEVGERAAQKMFGLDKK 598
FW N+EVGE MF ++ K
Sbjct: 350 FWNNVEVGENNNVHMFSVEDK 370
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 7 QSQTLMTQETL--IVSTNKAITECGRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWA 63
+S+ L + +L + S N IT +NG+L A LFD+ R VSWN+M+ GY
Sbjct: 114 KSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVSWNSMMSGYIHNG 173
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS 123
+ E+L L TM R +V+ +TFS + CA L S G+ +H + K+ Y+ +VG+
Sbjct: 174 QHSEALKLYVTMRRYSVEYRRSTFSVLSGGCAYLCSFQQGQLLHAHLAKTPYQENVYVGT 233
Query: 124 GLLFFYANCFEIEEAKRVFDELHEDN-ELLWSLMLVGYVQ--CNL 165
L+ FY+ C + +A+R F + N W+ ++ GY C+L
Sbjct: 234 ALVDFYSKCGHLADAQRSFTSIFSPNVAAAWTALINGYAYHGCDL 278
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKL 187
YA I ++K++F+++ + + M+ Y + + +A +F K +++ V W +
Sbjct: 106 YAMSGRIRKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVSWNSM 165
Query: 188 ISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
+SGY + E ALKL+ MR TF + CA L +F +G+++H L K
Sbjct: 166 MSGYIHNGQHSE-ALKLYVTMRRYSVEYRRS-TFSVLSGGCAYLCSFQQGQLLHAHLAKT 223
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMG 298
++ + +G AL++FY C A R + + +P + A+ +LING G
Sbjct: 224 PYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAAWTALINGYAYHG 275
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 213/657 (32%), Positives = 326/657 (49%), Gaps = 59/657 (8%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N I+ + G +R L +MP VSW ++ GY+++ FD ++ + + M
Sbjct: 78 SWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISER 137
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V ++ T S +LS CA +L G++IH V+K G V + LL YA C + AK
Sbjct: 138 VPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAK 197
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VFD + N W+ ++ Y+Q A F KMP +D+V W +ISGY++ E
Sbjct: 198 VVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLE 257
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
AL +F M P+ +T S++ ACA L GK +H +++ E ++G AL
Sbjct: 258 -ALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNAL 316
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF--NRLTEANSIS 317
I Y G +E A LI NR + N I+
Sbjct: 317 ISMYAKS-------------------------------GGVEIARLIVEHNRTSNLNIIA 345
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+ S++ GY G V ++ +F K+ +R+ V W +MI GYVQN
Sbjct: 346 FTSLLDGYTKLGNVKPAREIFNKL-----------------RDRDVVAWTAMIVGYVQNG 388
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
L AL+L+ M + T + + S L L+ G+ +HA +K S V
Sbjct: 389 LWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN 448
Query: 438 SLVDMYSRCGSINDAQASFSSISSPN----VAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+L+ MY++ G+IN A+ F PN + +WT+++ + HGLG EA+ LFE ML
Sbjct: 449 ALIAMYAKTGNINVAKRVFDL---PNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHE 552
+ P+ T+VGVLSAC GLV +G K + M + + PTL HY C++DL GR+G L E
Sbjct: 506 GMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQE 565
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A FI+ MPIE D + WG+LL++C N ++ + AA+++ +D AY+ L+N+Y+
Sbjct: 566 AYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSA 625
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
GKW RK + V+K+ G SWI + + VHAF VED +P + IY + +
Sbjct: 626 CGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEI 682
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 152/600 (25%), Positives = 255/600 (42%), Gaps = 95/600 (15%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK-------------------- 61
N +T + G L A ++FD+MP+++ SWNT++ GY+K
Sbjct: 49 NNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPV 108
Query: 62 -WAK----------FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLV 110
W FD ++ + + M V ++ T S +LS CA +L G++IH V
Sbjct: 109 SWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFV 168
Query: 111 LKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAF 170
+K G V + LL YA C + AK VFD + N W+ ++ Y+Q A
Sbjct: 169 VKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAA 228
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACAR 230
F KMP +D+V W +ISGY++ E AL +F M P+ +T S++ ACA
Sbjct: 229 SQFEKMPDRDIVSWNSMISGYSQQGYNLE-ALVIFSKMLNEPSLKPDNFTLASILSACAN 287
Query: 231 LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV--YDRLENPCLNASN 288
L GK +H +++ E ++G ALI Y + A + ++R N + A
Sbjct: 288 LEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFT 347
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM----PHR 344
SL++G +G ++ A IFN+L + + +++ +MI GY G +D+ LF M P
Sbjct: 348 SLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEP 407
Query: 345 SIISLNTMISV------------------------------------------------- 355
+ +L M+SV
Sbjct: 408 NSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVF 467
Query: 356 -IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+P ++ V+W SMI Q+ L ++A+ L+ M + + T+ + AC+ +G +
Sbjct: 468 DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLV 527
Query: 415 QQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMN 472
+QG+ + + + E + ++D+Y R G + +A S+ P+ AW +L+
Sbjct: 528 EQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLA 587
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAA--TFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
H A + E +L D + A V SAC G + + MK GV
Sbjct: 588 SCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC---GKWENAAQTRKLMKDRGV 644
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 236/502 (47%), Gaps = 18/502 (3%)
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M N + F+ IL ++ G+ +HC ++K G ++ + L+ FYA
Sbjct: 1 MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+ A VFDE+ + W+ ++ GY + + + +MP D V WT +I GY +
Sbjct: 61 LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQ- 119
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ A+ +F M S P+++T +V+ +CA G+ +H ++K G
Sbjct: 120 FGLFDNAIWMFAKMI-SERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVP 178
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+ +L+ Y C A V+DR+ ++ N+LI+ + G+ E A F ++ + +
Sbjct: 179 VATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRD 238
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
+S+NSMI GY+ G ++ +F KM LN P ++ + T S++S
Sbjct: 239 IVSWNSMISGYSQQGYNLEALVIFSKM-------LNE-----PSLKPDNFTLASILSACA 286
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
Q++ + + + + + + L + G ++ +L+ H + N+
Sbjct: 287 NLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNL--NII 344
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
TSL+D Y++ G++ A+ F+ + +V AWTA++ GY +GL ++A+ LF +M+ +
Sbjct: 345 AFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEG 404
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
PN+ T +LS ++ G +I S G T ++ + ++G+++ A+
Sbjct: 405 PEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAK 464
Query: 555 EFIKDMPI-ELDAVVWGALLSA 575
+ D+P + + V W +++ A
Sbjct: 465 R-VFDLPNGKKEIVSWTSMIMA 485
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 209/445 (46%), Gaps = 30/445 (6%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-H 76
I + N I+ ++GQ A + F++MP R +VSWN+M+ GYS+ E+L + S M +
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLN 267
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
++K + T ++ILS CA L L GKQIH +L++ E VG+ L+ YA +E
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327
Query: 137 EAKRVFDELHEDNE--LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
A+ + + N + ++ +L GY + + A ++F K+ +DVV WT +I GY +
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQ- 386
Query: 195 VDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+G AL+LFR M G PN YT +++ + L GK +H IK G
Sbjct: 387 -NGLWNDALELFRLMVNEGPE-PNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTP 444
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRL-- 310
S+ ALI Y + A RV+D S S+I L G ++A +F R+
Sbjct: 445 SVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLS 504
Query: 311 --TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
+ + I+Y ++ G V+ ++ + M++ + E+E +
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYY------------NMMTEVHEIEPTLSHYAC 552
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT- 427
MI Y + L ++A Y+ + + I+ + L +C + ++ L+
Sbjct: 553 MIDLYGRAGLLQEA---YLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLID 609
Query: 428 PFESNVYVGTSLVDMYSRCGSINDA 452
P S Y+ +L ++YS CG +A
Sbjct: 610 PGNSGAYL--ALANVYSACGKWENA 632
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 219/672 (32%), Positives = 345/672 (51%), Gaps = 61/672 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++G + AR +FD M R + SW M+ G ++ + E+ SL M R N TT+ +
Sbjct: 178 KSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLS 237
Query: 90 ILSVCA--QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
IL+ A +L K++H K+G+ VG+ L+ YA C I++A+ VFD + +
Sbjct: 238 ILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCD 297
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
+ + W+ M+ G Q +AF +F+KM ++ V
Sbjct: 298 RDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFV------------------------- 332
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
P+ T+ S++ GA+ K VH ++ G D +G A + Y C
Sbjct: 333 --------PDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCG 384
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISM----------------GRIEDAELIFNRLT 311
+ D A ++D+L + N++I G+ G DA N L+
Sbjct: 385 SIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILS 444
Query: 312 E---ANSISYNSMIKGYAV-YGQVDDSKRLFEKMPHRSIISLNTMIS--VIPEM-ERNPV 364
++ + + YA+ G VD R+ + H NTM + V +M ERN
Sbjct: 445 ANVGEEALEWVKEVHSYAIDAGLVD--LRVGNALVHMYAKCGNTMYAKQVFDDMVERNVT 502
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
TW MISG Q+ +A L++ M + I +T+ + AC+ G+L+ + +H+H
Sbjct: 503 TWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHA 562
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
V S++ VG +LV MY++CGS++DA+ F + +V +WT ++ G + HG G +A+
Sbjct: 563 VNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDAL 622
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDL 543
LF M + PN +FV VLSAC AGLV+EG + F S+ + YG+ PT+EHYTC+VDL
Sbjct: 623 DLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDL 682
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
LGR+G L EA+ FI +MPIE WGALL AC + N+E+ E AA++ L K S Y
Sbjct: 683 LGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTY 742
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
V+LSNIYA G W +K+ +R + ++K+PG SWIE+++++H+F V D ++P IY
Sbjct: 743 VLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIY 802
Query: 664 ATLEHLTANLNS 675
A L+ L L +
Sbjct: 803 AKLKDLIKRLKA 814
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 142/565 (25%), Positives = 249/565 (44%), Gaps = 99/565 (17%)
Query: 55 MLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG 114
M+ GY+++ ++++ + S M R + NE T+ +IL C SL GK+IH +++SG
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 115 YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI 174
++ V + L+ Y C I++A+ +FD++ E N + W++M+ G +AF F+
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 175 KMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAF 234
+M ++ + PN YT+ S++ A A GA
Sbjct: 121 QMQREGFI---------------------------------PNSYTYVSILNANASAGAL 147
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
K VH + G D +G AL+ Y + D A V+D + + + +I GL
Sbjct: 148 EWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGL 207
Query: 295 ISMGRIEDAELIFNRLTEA----NSISY-------------------------------- 318
GR ++A +F ++ N +Y
Sbjct: 208 AQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFIS 267
Query: 319 -----NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
N++I YA G +DD++ +F+ M R +IS WN+MI G
Sbjct: 268 DLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVIS-----------------WNAMIGGL 310
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
QN +A +++ M++ +T+ L + G+ + + +H H V+ S++
Sbjct: 311 AQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDL 370
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
VG++ V MY RCGSI+DAQ F ++ NV W A++ G + G EA+ LF M +
Sbjct: 371 RVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRRE 430
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV---VPTLEHYTCVVDLLGRSGHL 550
P+A TFV +LSA V E ++ + + SY + + L +V + + G+
Sbjct: 431 GFFPDATTFVNILSANVG----EEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNT 486
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
A++ DM +E + W ++S
Sbjct: 487 MYAKQVFDDM-VERNVTTWTVMISG 510
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 150/568 (26%), Positives = 253/568 (44%), Gaps = 59/568 (10%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A+ +FD+M R V+SW M+ G + + + E+ M R N T+ +IL
Sbjct: 79 GSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSIL 138
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ A +L K++H + +G VG+ L+ YA I++A+ VFD + E +
Sbjct: 139 NANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIF 198
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W++M+ G Q +AF +F++M E
Sbjct: 199 SWTVMIGGLAQHGRGQEAFSLFLQM---------------------------------ER 225
Query: 212 GENMPNEYTFDSVIRACA--RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G +PN T+ S++ A A GA K VH K GF D +G ALI Y C +
Sbjct: 226 GGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSI 285
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGY 325
D A V+D + + + + N++I GL G +A IF ++ + +S +Y S++ +
Sbjct: 286 DDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTH 345
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME------------------RNPVTWN 367
G + K + + ++S + S M RN TWN
Sbjct: 346 VSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWN 405
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+MI G Q +AL L++ MR+ +TF + A +L+ + +H++ +
Sbjct: 406 AMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDA 465
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
++ VG +LV MY++CG+ A+ F + NV WT +++G + HG G EA LF
Sbjct: 466 GL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLF 524
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
ML + IVP+A T+V +LSAC G + ++ + G+V L +V + +
Sbjct: 525 LQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKC 584
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + +A DM +E D W ++
Sbjct: 585 GSVDDARRVFDDM-LERDVYSWTVMIGG 611
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 198/466 (42%), Gaps = 40/466 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I + G + AR +FD M R V+SWN M+ G ++ E+ ++ M +
Sbjct: 273 NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFV 332
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ TT+ ++L+ + K++H ++ G VGS + Y C I++A+ +
Sbjct: 333 PDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLI 392
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAKSVDG 197
FD+L N W+ M+ G Q +A +F++M ++ D + ++S
Sbjct: 393 FDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVG---- 448
Query: 198 CEKALKLFRWMRESGENMPNEYTFD-----SVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
E+AL+ W++E + D +++ A+ G K V +++
Sbjct: 449 -EEALE---WVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTW 504
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+ L + CG EAF +++ P S+++ S G +E + + +
Sbjct: 505 TVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVN 564
Query: 313 ANSIS----YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
A +S N+++ YA G VDD++R+F+ M +ER+ +W
Sbjct: 565 AGLVSDLRVGNALVHMYAKCGSVDDARRVFDDM-----------------LERDVYSWTV 607
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT- 427
MI G Q+ AL L++ M+ +F + ACS G + +G+ L +
Sbjct: 608 MIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDY 667
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMN 472
E + T +VD+ R G + +A+ ++ P A W AL+
Sbjct: 668 GIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLG 713
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 193/652 (29%), Positives = 340/652 (52%), Gaps = 49/652 (7%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N ++ + G+L A +FD +P+R VSW T++ GY++ +F++++ + M +
Sbjct: 43 SWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDK 102
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V + T + +L+ CA S GK++H V+K G V + LL YA +++ AK
Sbjct: 103 VLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAK 162
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VFD + N W+ M+ ++ C + A F + ++D+V W +I+G + E
Sbjct: 163 VVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNE 222
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
AL+ F + + P+ ++ S + ACA L GK +HG +++ F+ ++G AL
Sbjct: 223 -ALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNAL 281
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYN 319
I Y + A R+ ++ + +++ + I++
Sbjct: 282 ISMYAKSGGVEIARRIIEQ-----------------------------SGISDLDVIAFT 312
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
+++ GY G + ++++F + + V W +MI GYVQN L+
Sbjct: 313 ALLNGYVKLGDITPARQIFNSLKDPDV-----------------VAWTAMIVGYVQNGLN 355
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
A++++ TM T + + A S + SL G+ +HA +++ + VG +L
Sbjct: 356 NDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNAL 415
Query: 440 VDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
MY++ GSIN A+ F+ + + + +WT+++ + HGLG EA+ LFE ML I P+
Sbjct: 416 TTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPD 475
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
T+VGVLSAC GLV +G F MK+ + + PTL HY C+VDL GR+G L EA +F+
Sbjct: 476 HITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFV 535
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
++MP+E D + WG+LLS+C + N+++ + AA+++ ++ AY L+N+Y+ GKW
Sbjct: 536 ENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWD 595
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
IRK + VKK+ G SW+++ ++ H F VED +P + IY ++ +
Sbjct: 596 DAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKI 647
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/527 (24%), Positives = 237/527 (44%), Gaps = 90/527 (17%)
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
++K G ++ + L+ YA +A +F+E+ W+ +L GY + + A
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
VF +P +D V WT +I GY + + E A+K+F M + + +P ++T +V+ +CA
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQ-MGRFEDAIKIFVDMVKD-KVLPTQFTLTNVLASCA 118
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
G+ GK VH ++K G + C+ +NS
Sbjct: 119 ATGSRGIGKKVHSFVVKLGL-------------------------------HACVPVANS 147
Query: 290 LINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
L+N G ++ A+++F+R+ N+ S+N+MI + G+VD + FE + R I+S
Sbjct: 148 LLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVS- 206
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT-MRKLAIDRTRSTFSVLFHAC 408
WNSMI+G Q+ +ALQ + + ++ ++ R + + AC
Sbjct: 207 ----------------WNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSAC 250
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC---------------------- 446
+ L L G+ +H ++V+T F+++ VG +L+ MY++
Sbjct: 251 ANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIA 310
Query: 447 -----------GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
G I A+ F+S+ P+V AWTA++ GY +GL ++A+ +F+ M+ +
Sbjct: 311 FTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGP 370
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
PN+ T +LSA +N G +I S G + + + ++G ++ A +
Sbjct: 371 RPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARK 430
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAA---QKMFGLDKKP 599
+ D V W +++ A +GE A ++M L KP
Sbjct: 431 VFNLLRQNRDTVSWTSMIMAL---AQHGLGEEAIELFEQMLTLGIKP 474
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/676 (30%), Positives = 360/676 (53%), Gaps = 56/676 (8%)
Query: 23 KAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL 82
K ++ + G + A +F+ + + ++TML GY+K + + +L+ + M +VK
Sbjct: 86 KLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKP 145
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
F+ +L VC L GK+IH ++ + + F +G++ YA C +I+
Sbjct: 146 VVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQID------ 199
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
DA+ +F +MP++D+V W +I+G++++ +KAL
Sbjct: 200 -------------------------DAYKMFDRMPERDLVSWNTIIAGFSQN-GFAKKAL 233
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
+L M++ G+ P+ T +V+ A A +G GK +HG I+ GF +I AL +
Sbjct: 234 ELVLRMQDEGQR-PDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISY 318
Y C + + A ++D ++ + + NS+++G + G E A +F ++ E ++
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352
Query: 319 NSMIKGYAVYGQVDDSK---RLFEKMPHRSIIS-LNTMISVIPEMER------------- 361
+ A G ++ K + +++ S IS +N++IS+ + +R
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412
Query: 362 -NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
V+WN+MI GY QN +AL + M+ L + T + A + L + + +
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWI 472
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H ++++ + N++V T+LVDMYS+CG+I+ A+ F IS +V W A+++GY HGLG
Sbjct: 473 HGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLG 532
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTC 539
A+ LF+ M + + PN T++ V+SAC +GLV+EG++ F+SMK YG+ P+++HY
Sbjct: 533 RAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGA 592
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
+VDLLGR+G + EA +FI++MPI V+GA AC N+EVGE+AA+K+F L+
Sbjct: 593 MVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDE 652
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNC 659
+V+L+NIYA KW K ++RK + +KK PGCS +EL + VH+F +P
Sbjct: 653 GGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQS 712
Query: 660 NVIYATLEHLTANLNS 675
IYA LE L + +
Sbjct: 713 KRIYAFLEELVYEIKA 728
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 215/514 (41%), Gaps = 67/514 (13%)
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
+ +L +C + L QI LV+K+G + L+ ++ I EA RVF+ + +
Sbjct: 53 AVLLELCTSMKEL---HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
+ L+ ML GY + + + A +M DV
Sbjct: 110 KLDALYHTMLKGYAKNSSLETALAFLCRMRYDDV-------------------------- 143
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
P Y F +++ C GK +HG LI F + ++ Y C
Sbjct: 144 -------KPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCR 196
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEA---NSISYNSMIK 323
D A +++DR+ L + N++I G G + A EL+ E +SI+ +++
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLP 256
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVT 365
A G + K + L + + + +M ++ V+
Sbjct: 257 AAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS 316
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WNSM+ GYVQN EKA+ ++ M + ID T T HAC+ LG L++G+ +H +
Sbjct: 317 WNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD 376
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ S++ V SL+ MYS+C ++ A F++++ +W A++ GY+ +G SEA+
Sbjct: 377 QLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALN 436
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM----KIFRSMKSYGVVPTLEHYTCVV 541
F M + P++ T V V+ A + I RS + T T +V
Sbjct: 437 CFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVT----TALV 492
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
D+ + G +H A + DM + + W A++
Sbjct: 493 DMYSKCGAIHMARKLF-DMISDRHVITWNAMIDG 525
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 110/220 (50%), Gaps = 5/220 (2%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ + ++ A ++F+ + RT VSWN M+ GY++ + E+L+ S M +K
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMK 447
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T +++ A+L+ K IH L+++S + FV + L+ Y+ C I A+++
Sbjct: 448 PDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKL 507
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV----VVWTKLISGYAKSVDG 197
FD + + + + W+ M+ GY L A D+F KM K V + + +IS + S
Sbjct: 508 FDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS-GL 566
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
++ L+ F+ M++ P+ + +++ R G E
Sbjct: 567 VDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA 606
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 217/679 (31%), Positives = 359/679 (52%), Gaps = 56/679 (8%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E + N + + + + ++ LFD++P R VVSWN + Y + E++ L
Sbjct: 189 EGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYE 248
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M S +K NE + S++++ C L GK IH ++K GY+ F + L+ YA
Sbjct: 249 MVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYA---- 304
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+V D ++DA VF K+ + D+V W +I+G
Sbjct: 305 -----KVGD----------------------LADAISVFEKIKQPDIVSWNAVIAGCVLH 337
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ E+AL+L M+ SG PN +T S ++ACA +G G+ +H L+K E D
Sbjct: 338 -EHHEQALELLGQMKRSG-ICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLF 395
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA- 313
+ L++ Y C+ + A ++ L L A N++I+G +A +F + +
Sbjct: 396 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 455
Query: 314 ---NSISYNSMIKGYAVYGQVDDSKRL----FEKMPHRSIISLNTMI------SVIPEME 360
N + ++++K A V +++ + H I +N++I S + + E
Sbjct: 456 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAE 515
Query: 361 R--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
R + V++ SMI+ Y Q E+AL+L++ M+ + + R S L +AC+ L
Sbjct: 516 RIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLS 575
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+ +QG+ LH H++K F +++ G SLV+MY++CGSI+DA +FS ++ + +W+A++
Sbjct: 576 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 635
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVV 531
G + HG G +A+ LF ML++ + PN T V VL AC AGLV E F SM+ +G
Sbjct: 636 GLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFK 695
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P EHY C++DLLGR+G ++EA E + MP E +A VWGALL A ++E+G RAA+
Sbjct: 696 PMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEM 755
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+F L+ + +V+L+NIYA GKW ++R+ + +VKK+PG SWIE+ +V+ F V
Sbjct: 756 LFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLV 815
Query: 652 EDRNNPNCNVIYATLEHLT 670
DR++ IYA L+ L+
Sbjct: 816 GDRSHYRSQEIYAKLDELS 834
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/561 (26%), Positives = 271/561 (48%), Gaps = 56/561 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR L D+ +VSW+ ++ GY++ +L MH VK NE TFS++L C+
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ L GKQ+H +V+ SG+E FV + L+ YA C E ++KR+
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL--------------- 214
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
F ++P+++VV W L S Y + +D C +A+ LF M SG P
Sbjct: 215 ----------------FDEIPERNVVSWNALFSCYVQ-IDFCGEAVGLFYEMVLSGIK-P 256
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
NE++ S++ AC L GK++HG LIK G+++D AL++ Y A+ V+
Sbjct: 257 NEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVF 316
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVD 332
++++ P + + N++I G + E A + ++ + N + +S +K A G +
Sbjct: 317 EKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKE 376
Query: 333 DSKRLFE---KMPHRS-------IISLNTMISVIPEM--------ERNPVTWNSMISGYV 374
++L KM S ++ + + ++ + E++ + WN++ISGY
Sbjct: 377 LGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYS 436
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
Q +AL L++ M K I ++T S + + + L + + +H VK+ F S++Y
Sbjct: 437 QYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIY 496
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
V SL+D Y +C + DA+ F + ++ ++T+++ Y+ +G G EA+ LF M + +
Sbjct: 497 VVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDME 556
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
+ P+ +L+AC +G ++ + YG V + +V++ + G + +A
Sbjct: 557 LKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAG 616
Query: 555 EFIKDMPIELDAVVWGALLSA 575
++ E V W A++
Sbjct: 617 RAFSEL-TERGIVSWSAMIGG 636
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/566 (24%), Positives = 259/566 (45%), Gaps = 66/566 (11%)
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
++++ ++ ++++ + + N ++S +LS C SL G QIH + KSG
Sbjct: 33 QFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPS 92
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
+ + L+ Y+ C A+++ DE E + + WS ++ GY Q L A F +M
Sbjct: 93 IRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLG 152
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
V NE+TF SV++AC+ + GK V
Sbjct: 153 VKC---------------------------------NEFTFSSVLKACSIVKDLRIGKQV 179
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
HG+++ GFE D + L+ Y C+ F + R++D + + + N+L + + +
Sbjct: 180 HGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFC 239
Query: 301 EDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN------ 350
+A +F + + N S +SM+ A G D S+ K+ H +I L
Sbjct: 240 GEAVGLFYEMVLSGIKPNEFSLSSMVN--ACTGLRDSSRG---KIIHGYLIKLGYDWDPF 294
Query: 351 ----------------TMISVIPEMER-NPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
ISV ++++ + V+WN++I+G V + HE+AL+L M++
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSG 354
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
I T S AC+ +G + G+ LH+ L+K ES+++V LVDMYS+C + DA+
Sbjct: 355 ICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDAR 414
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
+F+ + ++ AW A+++GYS + EA+ LF M ++ I N T +L +
Sbjct: 415 MAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQ 474
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+V+ ++ G + ++D G+ H+ +AE ++ I D V + +++
Sbjct: 475 VVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIG-DLVSFTSMI 533
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKP 599
+A + E + +M ++ KP
Sbjct: 534 TAYAQYGQGEEALKLFLEMQDMELKP 559
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 218/667 (32%), Positives = 350/667 (52%), Gaps = 58/667 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G L+ A +F +M R V SWN ++ GY+K FDE+L+L M + ++ N TF +
Sbjct: 144 RFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPS 203
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L CA ++ + GK+IH V++ G+E VG+ L+ Y C +I
Sbjct: 204 VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDI-------------- 249
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
S+A +F KMPK+D + W +ISGY ++ G E L+LF MR
Sbjct: 250 -----------------SNARMLFDKMPKRDRISWNAMISGYFENGGGLE-GLELFSMMR 291
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E + P+ T +V AC L G+ VHG ++K F D S+ +LI+ Y
Sbjct: 292 ELSVD-PDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRL 350
Query: 270 DGAMRVYDRLENPCLNASNSLINGLIS----MGRIEDAELIFNRLTEANSISYNSMIKGY 325
+ A V+ R+E+ + + ++I L+S +E +++ + I+ S++
Sbjct: 351 EEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSAC 410
Query: 326 AVYGQVDDSKRLFEKMPHRSIIS----LNTMISVIPEME--------------RNPVTWN 367
A G +D RL E ++S N++I + + + +N V+W
Sbjct: 411 ACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWT 470
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
S+I G NN +AL + M++ + + SVL AC+ +G+L +G+ +HAH ++T
Sbjct: 471 SLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVL-SACARIGALMRGKEIHAHALRT 529
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ ++ +++DMY RCG A F+S +V AW L+ GY+ G AV LF
Sbjct: 530 GVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELF 588
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGR 546
+ MLE +I P+ TF+ +L AC ++G+V EG++ F MK+ Y + P L+HY CVVD+LGR
Sbjct: 589 DKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGR 648
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G L +A +FI+DMPI DA +WGALL+AC N+E+GE AA+++F D K + Y++L
Sbjct: 649 AGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILL 708
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
N+YA G W K +R + + DPGCSW+E+ +VHAF D ++ I L
Sbjct: 709 CNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVL 768
Query: 667 EHLTANL 673
+ + +
Sbjct: 769 DGFCSKM 775
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 153/543 (28%), Positives = 240/543 (44%), Gaps = 101/543 (18%)
Query: 136 EEAKRVFDELHEDNELL----WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+E RV++ + L + +L +V+ + DA+ VF KM ++DV W L+ GY
Sbjct: 114 DEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGY 173
Query: 192 AKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
AK+ GC ++AL L+ M + E PN YTF SV++ CA + GK +H +I+ GFE
Sbjct: 174 AKA--GCFDEALNLYHRMLWA-EIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFE 230
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING----------------- 293
D +G ALI Y C A ++D++ + N++I+G
Sbjct: 231 SDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMM 290
Query: 294 --------LISMGRIEDA-ELIFNRLTEANSISY-------------NSMIKGYAVYGQV 331
LI+M + A EL+ N Y NS+I+ Y+ G++
Sbjct: 291 RELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRL 350
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
++++ +F +M + ++S W +MI+ V + L KA++ Y M
Sbjct: 351 EEAETVFSRMESKDVVS-----------------WTAMIASLVSHKLPFKAVETYKMMEL 393
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
I T + AC+C+G L G LH +KT S+V V SL+DMYS+C +++
Sbjct: 394 EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A F +IS NV +WT+L+ G + EA+L F M E + PN+ T + VLSAC R
Sbjct: 454 ALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACAR 512
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
G + G +I GV G G L A I DM + V
Sbjct: 513 IGALMRGKEIHAHALRTGV--------------GFDGFLPNA---ILDMYVRCGRKV--- 552
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
A F KK ++A+ IL YA G+ +++ ++ LE+
Sbjct: 553 ----------------PALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596
Query: 632 KKD 634
D
Sbjct: 597 HPD 599
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 215/483 (44%), Gaps = 65/483 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N IT + G + AR LFD+MP R +SWN M+ GY + E L L S M +V
Sbjct: 237 NALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVD 296
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T +T+ S C L++ G+ +H V+KS + + + L+ Y++ +EEA+ V
Sbjct: 297 PDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETV 356
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F +M KDVV WT +I+ S KA
Sbjct: 357 FS-------------------------------RMESKDVVSWTAMIASLV-SHKLPFKA 384
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
++ ++ M G +P+E T SV+ ACA +G G +H + IK G + +LI+
Sbjct: 385 VETYKMMELEGI-LPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLID 443
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA---NSISY 318
Y C+ D A+ V+ + + + SLI GL R +A L F ++ E+ NS++
Sbjct: 444 MYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTL 503
Query: 319 NSMIKGYAVYGQVDDSKRLFEK-----------MPH----------RSIISLNTMISVIP 357
S++ A G + K + +P+ R + +LN S
Sbjct: 504 ISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS--- 560
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
+++ WN +++GY Q + A++L+ M +L I TF L ACS G + +G
Sbjct: 561 -QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEG 619
Query: 418 QLLHAHLVKTPFE--SNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGY 474
L + +++K + N+ +VD+ R G ++DA + P+ A W AL+N
Sbjct: 620 -LEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNAC 678
Query: 475 SHH 477
H
Sbjct: 679 RIH 681
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
+Q NL E+A++ +M +L I+ + L C + +G ++ + + V
Sbjct: 74 LQGNL-EQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCV 132
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+G +L+ M+ R G++ DA F +S +V +W L+ GY+ G EA+ L+ ML
Sbjct: 133 RLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWA 192
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
+I PN TF VL C + G +I + +G ++ ++ + + G + A
Sbjct: 193 EIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNA 252
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
MP + D + W A++S
Sbjct: 253 RMLFDKMP-KRDRISWNAMISG 273
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 211/694 (30%), Positives = 369/694 (53%), Gaps = 52/694 (7%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS 70
L E IV+ N I+ +NG++ AR LFD MP R +VSWN+M+ GY +++
Sbjct: 39 LQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAAR 98
Query: 71 LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL-KSGYECFEFVGSGLLFFY 129
L M + ++ +++ +++ ++ L +++ L+ K C + L+ Y
Sbjct: 99 LFDRMFKRDI----YSWTLMITCYTRIGELEKARELFNLLPDKQDTVC----RNALIAGY 150
Query: 130 ANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
A EAK++FDE+ N + W+ +L GY + M F M +++VV W ++
Sbjct: 151 AKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVD 210
Query: 190 GYAKSVDGCEKALKLFR---------WMR-----------ESGENMPNEYTFDSVIRACA 229
GY V + A F+ W+ N+ NE +++ A
Sbjct: 211 GYV-GVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNA 269
Query: 230 RLGAFCEGKVV---HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
+GA+ + + L ++ E D A+I Y A + + + + A
Sbjct: 270 MIGAYVRENQIDDAYKLFMEMP-EKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAA 328
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
++ING + GR+++A IF++++ +S+ +NSMI GYA G+ D++ RLF++M + +
Sbjct: 329 QTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDM 388
Query: 347 ISLNTMISVIPE--------------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+S NTMI+ + ERN V+WNS+I+GYVQN L+ +AL ++ M++
Sbjct: 389 VSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQ 448
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
++T A + L +L G LH +KT F ++++V +++ MY++ G + +A
Sbjct: 449 GEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEA 508
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ F+ I + +V +W +L+ GY+ +G G EAV LFE+M + I+P+ TF G+LSAC
Sbjct: 509 ENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHG 568
Query: 513 GLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
G V++G+ +F+SM ++Y + P EHY CV++LLGR G L EA E ++ M A +WGA
Sbjct: 569 GFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGA 628
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
LL AC N+E+ + +A+++ L+ + S YV+LSN++A G+W +R + +
Sbjct: 629 LLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKA 688
Query: 632 KKDPGCSWIELNSRVHAF---SVEDRNNPNCNVI 662
+K PGCSWIE+++++H F + D CN++
Sbjct: 689 EKQPGCSWIEIDNQLHCFLSKAPPDLRPEICNIL 722
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 216/413 (52%), Gaps = 39/413 (9%)
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
IEEA VF ++ E N + ++ M+ Y + +++A ++F MP++++V W +I+GY +
Sbjct: 31 IEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHN 90
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ E A +LF M + + Y++ +I R+G + + + LL + D
Sbjct: 91 -ELVEDAARLFDRMFKR-----DIYSWTLMITCYTRIGELEKARELFNLLPD---KQDTV 141
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
ALI Y F A +++D + + + NS+++G G+++ F + E N
Sbjct: 142 CRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERN 201
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEME- 360
+S+N M+ GY G +D + F+K+P +++S TM+S + EM
Sbjct: 202 VVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPT 261
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
+N V+WN+MI YV+ N + A +L+M M ++ +++ + + G ++ G+LL
Sbjct: 262 KNLVSWNAMIGAYVRENQIDDAYKLFMEMP----EKDSVSWTAMIN-----GYVRVGKLL 312
Query: 421 HAH--LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
A L P++ N+ T++++ Y + G +++A FS IS + W +++ GY+H G
Sbjct: 313 QAREILNLMPYK-NIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCG 371
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
EA+ LF+ M+ +D+V ++ +++A +AG +++ +++F M+ VV
Sbjct: 372 RTDEALRLFQEMVCKDMV----SWNTMIAAYAQAGQMDKALEMFNEMQERNVV 420
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 148/316 (46%), Gaps = 56/316 (17%)
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
N I+ L GRIE+A +F ++TE N ++YNSMI YA G++ +++ LF+ MP
Sbjct: 18 QNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMP---- 73
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
+RN V+WNSMI+GY+ N L E A +L+ M K R +++++
Sbjct: 74 -------------QRNLVSWNSMIAGYLHNELVEDAARLFDRMFK----RDIYSWTLMIT 116
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
+ +G L++ + L L P + + +L+ Y++ +A+ F + NV +
Sbjct: 117 CYTRIGELEKARELFNLL---PDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVS 173
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIV---------------------------PNA 499
W ++++GY+ +G + FE M E+++V PN
Sbjct: 174 WNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNV 233
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
++V +LS G + E +F M + +V + ++ R + +A + +
Sbjct: 234 VSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVS----WNAMIGAYVRENQIDDAYKLFME 289
Query: 560 MPIELDAVVWGALLSA 575
MP E D+V W A+++
Sbjct: 290 MP-EKDSVSWTAMING 304
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 219/689 (31%), Positives = 348/689 (50%), Gaps = 99/689 (14%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSK 61
YA + M Q + S AI+ GR G + AR +FD P+ RT+ SWN M+ Y +
Sbjct: 5 YAATLRCRMVQARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFE 64
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
K ++L L M + N N +I G +V
Sbjct: 65 SHKPRDALLLFDQMPQRNT--------------VSFNGMISG----------------YV 94
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+G+ + +A++VFD + E N + W+ M+ GYVQ ++ +A +F +MP+++V
Sbjct: 95 KNGM---------VADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNV 145
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
V WT +I G K + A KLF + E D V+
Sbjct: 146 VSWTVMIGGLLKE-SRIDDAKKLFDMIPEK----------DVVV---------------- 178
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
IGG YC D A ++D ++ + ++++G GR++
Sbjct: 179 ---------VTNMIGG-----YCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVD 224
Query: 302 DAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI---SVIPE 358
A +F + E N +S+ +M+ GY G++ ++ LFE MP + I++ N MI + E
Sbjct: 225 VARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGE 284
Query: 359 M-----------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
M ER+ TWN+MI + + L +AL L+ M++ + + +
Sbjct: 285 MHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSV 344
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ L SL G+ +HA LV++ F+ ++YV + L+ MY +CG + A+ F+ +V W
Sbjct: 345 CASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMW 404
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK- 526
+++ GYS HGLG EA+ +F M + P+ TF+GVLSAC +G V EG +IF +MK
Sbjct: 405 NSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKC 464
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+Y V P +EHY C+VDLLGR+G + EA E ++ MP+E DA+VWGALL AC M +++ E
Sbjct: 465 TYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAE 524
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
A +K+ L+ K YV+LS++YA G+W +RK++ V K PGCSWIE+ +V
Sbjct: 525 VAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINR-RVIKFPGCSWIEVEKKV 583
Query: 647 HAFSVED-RNNPNCNVIYATLEHLTANLN 674
H F+ D +++P ++I LE L+ L
Sbjct: 584 HMFTGGDSKSHPEQHMITQMLEKLSGFLR 612
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 218/667 (32%), Positives = 350/667 (52%), Gaps = 58/667 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G L+ A +F +M R V SWN ++ GY+K FDE+L+L M + ++ N TF +
Sbjct: 144 RFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPS 203
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L CA ++ + GK+IH V++ G+E VG+ L+ Y C +I
Sbjct: 204 VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDI-------------- 249
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
S+A +F KMPK+D + W +ISGY ++ G E L+LF MR
Sbjct: 250 -----------------SNARMLFDKMPKRDRISWNAMISGYFENGGGLE-GLELFSMMR 291
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E + P+ T +V AC L G+ VHG ++K F D S+ +LI+ Y
Sbjct: 292 ELSVD-PDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRL 350
Query: 270 DGAMRVYDRLENPCLNASNSLINGLIS----MGRIEDAELIFNRLTEANSISYNSMIKGY 325
+ A V+ R+E+ + + ++I L+S +E +++ + I+ S++
Sbjct: 351 EEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSAC 410
Query: 326 AVYGQVDDSKRLFEKMPHRSIIS----LNTMISVIPEME--------------RNPVTWN 367
A G +D RL E ++S N++I + + + +N V+W
Sbjct: 411 ACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWT 470
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
S+I G NN +AL + M++ + + SVL AC+ +G+L +G+ +HAH ++T
Sbjct: 471 SLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVL-SACARIGALMRGKEIHAHALRT 529
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ ++ +++DMY RCG A F+S +V AW L+ GY+ G AV LF
Sbjct: 530 GVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELF 588
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGR 546
+ MLE +I P+ TF+ +L AC ++G+V EG++ F MK+ Y + P L+HY CVVD+LGR
Sbjct: 589 DKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGR 648
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G L +A +FI+DMPI DA +WGALL+AC N+E+GE AA+++F D K + Y++L
Sbjct: 649 AGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILL 708
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
N+YA G W K +R + + DPGCSW+E+ +VHAF D ++ I L
Sbjct: 709 CNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVL 768
Query: 667 EHLTANL 673
+ + +
Sbjct: 769 DGFCSKM 775
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 153/543 (28%), Positives = 240/543 (44%), Gaps = 101/543 (18%)
Query: 136 EEAKRVFDELHEDNELL----WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+E RV++ + L + +L +V+ + DA+ VF KM ++DV W L+ GY
Sbjct: 114 DEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGY 173
Query: 192 AKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
AK+ GC ++AL L+ M + E PN YTF SV++ CA + GK +H +I+ GFE
Sbjct: 174 AKA--GCFDEALNLYHRMLWA-EIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFE 230
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING----------------- 293
D +G ALI Y C A ++D++ + N++I+G
Sbjct: 231 SDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMM 290
Query: 294 --------LISMGRIEDA-ELIFNRLTEANSISY-------------NSMIKGYAVYGQV 331
LI+M + A EL+ N Y NS+I+ Y+ G++
Sbjct: 291 RELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRL 350
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
++++ +F +M + ++S W +MI+ V + L KA++ Y M
Sbjct: 351 EEAETVFSRMESKDVVS-----------------WTAMIASLVSHKLPFKAVETYKMMEL 393
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
I T + AC+C+G L G LH +KT S+V V SL+DMYS+C +++
Sbjct: 394 EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A F +IS NV +WT+L+ G + EA+L F M E + PN+ T + VLSAC R
Sbjct: 454 ALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACAR 512
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
G + G +I GV G G L A I DM + V
Sbjct: 513 IGALMRGKEIHAHALRTGV--------------GFDGFLPNA---ILDMYVRCGRKV--- 552
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
A F KK ++A+ IL YA G+ +++ ++ LE+
Sbjct: 553 ----------------PALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596
Query: 632 KKD 634
D
Sbjct: 597 HPD 599
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 215/483 (44%), Gaps = 65/483 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N IT + G + AR LFD+MP R +SWN M+ GY + E L L S M +V
Sbjct: 237 NALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVD 296
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T +T+ S C L++ G+ +H V+KS + + + L+ Y++ +EEA+ V
Sbjct: 297 PDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETV 356
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F +M KDVV WT +I+ S KA
Sbjct: 357 FS-------------------------------RMESKDVVSWTAMIASLV-SHKLPFKA 384
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
++ ++ M G +P+E T SV+ ACA +G G +H + IK G + +LI+
Sbjct: 385 VETYKMMELEGI-LPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLID 443
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA---NSISY 318
Y C+ D A+ V+ + + + SLI GL R +A L F ++ E+ NS++
Sbjct: 444 MYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTL 503
Query: 319 NSMIKGYAVYGQVDDSKRLFEK-----------MPH----------RSIISLNTMISVIP 357
S++ A G + K + +P+ R + +LN S
Sbjct: 504 ISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS--- 560
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
+++ WN +++GY Q + A++L+ M +L I TF L ACS G + +G
Sbjct: 561 -QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEG 619
Query: 418 QLLHAHLVKTPFE--SNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGY 474
L + +++K + N+ +VD+ R G ++DA + P+ A W AL+N
Sbjct: 620 -LEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNAC 678
Query: 475 SHH 477
H
Sbjct: 679 RIH 681
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
+Q NL E+A++ +M +L I+ + L C + +G ++ + + V
Sbjct: 74 LQGNL-EQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCV 132
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+G +L+ M+ R G++ DA F +S +V +W L+ GY+ G EA+ L+ ML
Sbjct: 133 RLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWA 192
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
+I PN TF VL C + G +I + +G ++ ++ + + G + A
Sbjct: 193 EIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNA 252
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
MP + D + W A++S
Sbjct: 253 RMLFDKMP-KRDRISWNAMISG 273
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 350/661 (52%), Gaps = 56/661 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A +F + + ++TML GY++ + D+++S M V+ F+ +L
Sbjct: 123 GSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLL 182
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
VC L GK+IHC ++ +G+ F +G++ YA
Sbjct: 183 KVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYA--------------------- 221
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+C L+ +A+ +F +MP++D+V W +ISGYA++ G + AL+L M+E
Sbjct: 222 ----------KCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFG-KTALELVLRMQEE 270
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G+ P+ T S++ A A +G+ G+ +HG ++ GFE ++ AL++ Y C +
Sbjct: 271 GKR-PDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGT 329
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAV 327
A ++DR+ + + NS+I+G + G A IF ++ E +++ + A
Sbjct: 330 ARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACAD 389
Query: 328 YGQVDDSK---RLFEKMPHRSIIS-LNTMISVIPEMER--------------NPVTWNSM 369
G V+ + +L +++ S +S +N++IS+ + +R V+WN+M
Sbjct: 390 LGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAM 449
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
I GY QN +A+ + M+ I T + A + L L Q + +H +++T
Sbjct: 450 ILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCL 509
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ NV+V T+LVDMY++CG+++ A+ F + +V W A+++GY HGLG A+ LFE
Sbjct: 510 DKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEK 569
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSG 548
M ++ I PN TF+ VLSAC +GLV EG + F SM K YG+ P ++HY +VDLLGR+
Sbjct: 570 MKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRAN 629
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L+EA +FI+ MPIE V+GA+L AC N+E+GE+AA ++F LD +V+L+N
Sbjct: 630 RLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLAN 689
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
IYA W K +R + ++K PG S +EL + VH F ++P IYA LE
Sbjct: 690 IYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLET 749
Query: 669 L 669
L
Sbjct: 750 L 750
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 56/315 (17%)
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
L+IK G + L+ +C + A RV+ +E+ ++++ G ++D
Sbjct: 99 LIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDD 158
Query: 303 AELIFNR-------------------------LTEANSISYNSMIKGYA----------- 326
A F R L + I ++ G+A
Sbjct: 159 AVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVN 218
Query: 327 VYGQ---VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
+Y + V+++ ++F++MP ER+ V WN++ISGY QN + AL
Sbjct: 219 MYAKCRLVEEAYKMFDRMP-----------------ERDLVCWNTIISGYAQNGFGKTAL 261
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+L + M++ T + A + +GSL+ G+ +H + ++ FES V V T+LVDMY
Sbjct: 262 ELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMY 321
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
S+CGS+ A+ F ++ V +W ++++GY +G A+ +F+ M+++ + T +
Sbjct: 322 SKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVM 381
Query: 504 GVLSACVRAGLVNEG 518
G L AC G V +G
Sbjct: 382 GALHACADLGDVEQG 396
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 141/330 (42%), Gaps = 38/330 (11%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ + ++ A +F+ + +T+VSWN M+ GY++ + +E++ M N+K
Sbjct: 416 NSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIK 475
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T +++ A+L+ L K IH LV+++ + FV + L+ YA C + A+++
Sbjct: 476 PDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKL 535
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD + E + W+ M+ GY L A ++F KM KK+V+
Sbjct: 536 FDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKM-KKEVI------------------- 575
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK-CGFEFDESIGGALI 260
PNE TF V+ AC+ G EG G + K G E GA++
Sbjct: 576 -------------KPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMV 622
Query: 261 EFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRL--TEANSIS 317
+ + A ++ P ++ +++ +E E NR+ + +
Sbjct: 623 DLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGG 682
Query: 318 YNSMIKG-YAVYGQVDDSKRLFEKMPHRSI 346
Y+ ++ YA D R+ M + I
Sbjct: 683 YHVLLANIYATASMWDKVARVRTTMEKKGI 712
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 4/174 (2%)
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
++L C+ + L Q L ++K S T LV ++ + GS+++A F I
Sbjct: 81 AILLELCTSMKELHQFIPL---IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIED 137
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+ ++ GY+ + +AV F M + P F +L C + +G +I
Sbjct: 138 KIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEI 197
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G + T VV++ + + EA + MP E D V W ++S
Sbjct: 198 HCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMP-ERDLVCWNTIISG 250
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 205/681 (30%), Positives = 347/681 (50%), Gaps = 91/681 (13%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
+ G + AR +FD + ++T V+W ++ GY+K + + SL L + M +V + S
Sbjct: 200 AKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVIS 259
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++LS C+ L L GKQIH VL+ G++ V +G++ FY C +++ +++F+ L +
Sbjct: 260 SVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVD- 318
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG-YAKSVDGCEKALKLFRW 207
KDVV WT +I+G S G A+ LF
Sbjct: 319 ------------------------------KDVVSWTTMIAGCMQNSFHG--DAMDLFVE 346
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M G P+ + SV+ +C L A +G+ VH IK + D+ + LI+ Y C+
Sbjct: 347 MVRKGWK-PDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCD 405
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----------------- 310
+ A +V+D + + + N++I G ++ +A +F +
Sbjct: 406 SLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLG 465
Query: 311 ----------------------TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
+S + +++I Y+ V D++ +FE++ R I
Sbjct: 466 LSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDI-- 523
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
V WN+M SGY Q +E++L+LY ++ + TF+ + A
Sbjct: 524 ---------------VVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAA 568
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
S + SL+ GQ H ++K + + +V SLVDMY++CGSI ++ +FSS + ++A W
Sbjct: 569 SNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWN 628
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
++++ Y+ HG ++A+ +FE M+ + + PN TFVG+LSAC AGL++ G F SM +
Sbjct: 629 SMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSKF 688
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P ++HY C+V LLGR+G ++EA+EF+K MPI+ AVVW +LLSAC ++E+G A
Sbjct: 689 GIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYA 748
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A+ D +Y++LSNI+A G W +R+++ V K+PG SWIE+N+ VH
Sbjct: 749 AEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWIEVNNEVHR 808
Query: 649 FSVEDRNNPNCNVIYATLEHL 669
F D + + +I L++L
Sbjct: 809 FIARDTAHRDSTLISLVLDNL 829
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 138/563 (24%), Positives = 254/563 (45%), Gaps = 61/563 (10%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNETTFSTILSVCA 95
A+ LFD MP R +V+W++M+ Y++ E+L L RS + K NE ++++ C
Sbjct: 106 AQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACT 165
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
QL +L Q+H V+K G+ +VG+ L+ FYA ++EA+ +FD L + W+
Sbjct: 166 QLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTA 225
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
++ GY K+ + +V +LKLF MRE G+
Sbjct: 226 IIAGYA-------------KLGRSEV-------------------SLKLFNQMRE-GDVY 252
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ Y SV+ AC+ L GK +HG +++ GF+ D S+ +I+FY C ++
Sbjct: 253 PDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKL 312
Query: 276 YDRLENPCLNASNSLING----------------LISMGRIEDA---ELIFNRLTEANSI 316
++RL + + + ++I G ++ G DA + N ++
Sbjct: 313 FNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQAL 372
Query: 317 SYNSMIKGYAVYGQVDDS---KRLFEKMPHR--SIISLNTMISVIPEMERNPVTWNSMIS 371
+ YA+ +D+ K M + S+ + + ++ + N V++N+MI
Sbjct: 373 QKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAI--NVVSYNAMIE 430
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
GY + + +AL L+ MR T TF L S L L+ +H ++K
Sbjct: 431 GYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSL 490
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+ + G++L+D+YS+C + DA+ F I ++ W A+ +GYS E++ L++ +
Sbjct: 491 DSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQ 550
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
+ PN TF V++A + G + + G+ +VD+ + G +
Sbjct: 551 MSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIE 610
Query: 552 EAEEFIKDMPIELDAVVWGALLS 574
E+ + + D W +++S
Sbjct: 611 ESHKAFSSTN-QRDIACWNSMIS 632
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 234/502 (46%), Gaps = 70/502 (13%)
Query: 104 KQIHCLVLKSGYECFE-FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
K+IH ++ G+ + F+ + LL Y+ +A+++FD + N + WS M+ Y Q
Sbjct: 71 KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF-RWMRESGENMPNEYTF 221
GY+ +AL LF R+MR E PNEY
Sbjct: 131 --------------------------HGYSV------EALLLFCRFMRSCSEK-PNEYIL 157
Query: 222 DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
SV+RAC +LG + +HG ++K GF D +G +LI+FY D A ++D L+
Sbjct: 158 ASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKV 217
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEAN----------SISYNSMIK----GYAV 327
++I G +GR E + +FN++ E + +S SM++ G +
Sbjct: 218 KTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQI 277
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPE--------------MERNPVTWNSMISGY 373
+G V +R F+ + +N +I + ++++ V+W +MI+G
Sbjct: 278 HGYV--LRRGFD----MDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGC 331
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
+QN+ H A+ L++ M + + + ++C L +LQ+G+ +HA+ +K +++
Sbjct: 332 MQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDD 391
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+V L+DMY++C S+ +A+ F +++ NV ++ A++ GYS EA+ LF M
Sbjct: 392 FVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLS 451
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
P TFV +L L+ +I + +GV + ++D+ + + +A
Sbjct: 452 LSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDA 511
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
+++ + D VVW A+ S
Sbjct: 512 RLVFEEI-YDRDIVVWNAMFSG 532
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 19/259 (7%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+++ Y+ D+++LF+ MPHR N VTW+SM+S Y Q+
Sbjct: 91 NTLLHAYSKMNLQSDAQKLFDTMPHR-----------------NLVTWSSMVSMYTQHGY 133
Query: 379 HEKALQLYMT-MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+AL L+ MR + + + AC+ LG+L Q LH +VK F +VYVGT
Sbjct: 134 SVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGT 193
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SL+D Y++ G +++A+ F + WTA++ GY+ G ++ LF M E D+ P
Sbjct: 194 SLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYP 253
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
+ VLSAC + G +I + G + ++D + + +
Sbjct: 254 DRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLF 313
Query: 558 KDMPIELDAVVWGALLSAC 576
+ ++ D V W +++ C
Sbjct: 314 NRL-VDKDVVSWTTMIAGC 331
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 154/378 (40%), Gaps = 108/378 (28%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS N I R +LV A +LF +M R +S T+L
Sbjct: 422 VVSYNAMIEGYSRQDKLVEALDLFREM--RLSLSPPTLL--------------------- 458
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
TF ++L + + L L QIHCL++K G F GS L+ Y+ C + +
Sbjct: 459 --------TFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGD 510
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VF+E+++ + ++W+ M SGY++ ++
Sbjct: 511 ARLVFEEIYDRDIVVWNAMF-------------------------------SGYSQQLEN 539
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E++LKL++ ++ S PNE+TF +VI A + + + G+ H +IK G + D +
Sbjct: 540 -EESLKLYKDLQMS-RLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTN 597
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
+L++ Y C G IE++ F+ + +
Sbjct: 598 SLVDMYAKC-------------------------------GSIEESHKAFSSTNQRDIAC 626
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+NSMI YA +G + +FE+M ++ ++ N VT+ ++S
Sbjct: 627 WNSMISTYAQHGDAAKALEVFERM-------------IMEGVKPNYVTFVGLLSACSHAG 673
Query: 378 LHEKALQLYMTMRKLAID 395
L + + +M K I+
Sbjct: 674 LLDLGFHHFESMSKFGIE 691
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 4/194 (2%)
Query: 420 LHAHLVKTPF-ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+HAH+V F + +V++ +L+ YS+ +DAQ F ++ N+ W+++++ Y+ HG
Sbjct: 73 IHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHG 132
Query: 479 LGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
EA+LLF M PN V+ AC + G +++ +++ + G V +
Sbjct: 133 YSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVG 192
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
T ++D + G++ EA + ++ V W A+++ EV + +M D
Sbjct: 193 TSLIDFYAKRGYVDEARLIFDGLKVK-TTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDV 251
Query: 598 KPISAYVILSNIYA 611
P YVI S + A
Sbjct: 252 YP-DRYVISSVLSA 264
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 211/694 (30%), Positives = 368/694 (53%), Gaps = 52/694 (7%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS 70
L E IV+ N I+ +NG++ AR LFD MP R +VSWN+M+ GY +++
Sbjct: 39 LKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAAR 98
Query: 71 LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL-KSGYECFEFVGSGLLFFY 129
L M + ++ +++ +++ ++ L +++ L+ K C + L+ Y
Sbjct: 99 LFDRMFKRDI----YSWTLMITCYTRIGELEKARELFNLLPDKQDTVC----RNALIAGY 150
Query: 130 ANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
A EAK++FDE+ N + W+ +L GY + M F M +++VV W ++
Sbjct: 151 AKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVD 210
Query: 190 GYAKSVDGCEKALKLFR---------WMR-----------ESGENMPNEYTFDSVIRACA 229
GY V + A F+ W+ N+ NE +++ A
Sbjct: 211 GYV-GVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNA 269
Query: 230 RLGAFCEGKVV---HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
+GA+ + + L ++ E D A+I Y A + + + + A
Sbjct: 270 MIGAYVRENQIDDAYKLFMEMP-EKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAA 328
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
++ING + GR+++A IF++++ +S+ +NSMI GYA G+ D++ RLF++M + +
Sbjct: 329 QTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDM 388
Query: 347 ISLNTMISVIPE--------------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+S NTMI+ + ERN V+WNS+I+GYVQN L+ +AL ++ M++
Sbjct: 389 VSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQ 448
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
++T A + L +L G LH +KT F ++++V +++ MY++ G + +A
Sbjct: 449 GEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEA 508
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ F+ I +V +W +L+ GY+ +G G EAV LFE+M + I+P+ TF G+LSAC
Sbjct: 509 ENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHG 568
Query: 513 GLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
G V++G+ +F+SM ++Y + P EHY CV++LLGR G L EA E ++ M A +WGA
Sbjct: 569 GFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGA 628
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
LL AC N+E+ + +A+++ L+ + S YV+LSN++A G+W +R + +
Sbjct: 629 LLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKA 688
Query: 632 KKDPGCSWIELNSRVHAF---SVEDRNNPNCNVI 662
+K PGCSWIE+++++H F + D CN++
Sbjct: 689 EKQPGCSWIEIDNQLHCFLSKAPPDLRPEICNIL 722
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 216/413 (52%), Gaps = 39/413 (9%)
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
IEEA VF ++ E N + ++ M+ Y + +++A ++F MP++++V W +I+GY +
Sbjct: 31 IEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHN 90
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ E A +LF M + + Y++ +I R+G + + + LL + D
Sbjct: 91 -ELVEDAARLFDRMFKR-----DIYSWTLMITCYTRIGELEKARELFNLLPD---KQDTV 141
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
ALI Y F A +++D + + + NS+++G G+++ F + E N
Sbjct: 142 CRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERN 201
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEME- 360
+S+N M+ GY G +D + F+K+P +++S TM+S + EM
Sbjct: 202 VVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPT 261
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
+N V+WN+MI YV+ N + A +L+M M ++ +++ + + G ++ G+LL
Sbjct: 262 KNLVSWNAMIGAYVRENQIDDAYKLFMEMP----EKDSVSWTAMIN-----GYVRVGKLL 312
Query: 421 HAH--LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
A L P++ N+ T++++ Y + G +++A FS IS + W +++ GY+H G
Sbjct: 313 QAREILNLMPYK-NIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCG 371
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
EA+ LF+ M+ +D+V ++ +++A +AG +++ +++F M+ VV
Sbjct: 372 RTDEALRLFQEMVCKDMV----SWNTMIAAYAQAGQMDKALEMFNEMQERNVV 420
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 148/316 (46%), Gaps = 56/316 (17%)
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
N I+ L GRIE+A +F ++TE N ++YNSMI YA G++ +++ LF+ MP
Sbjct: 18 QNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMP---- 73
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
+RN V+WNSMI+GY+ N L E A +L+ M K R +++++
Sbjct: 74 -------------QRNLVSWNSMIAGYLHNELVEDAARLFDRMFK----RDIYSWTLMIT 116
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
+ +G L++ + L L P + + +L+ Y++ +A+ F + NV +
Sbjct: 117 CYTRIGELEKARELFNLL---PDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVS 173
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIV---------------------------PNA 499
W ++++GY+ +G + FE M E+++V PN
Sbjct: 174 WNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNV 233
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
++V +LS G + E +F M + +V + ++ R + +A + +
Sbjct: 234 VSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVS----WNAMIGAYVRENQIDDAYKLFME 289
Query: 560 MPIELDAVVWGALLSA 575
MP E D+V W A+++
Sbjct: 290 MP-EKDSVSWTAMING 304
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 149/305 (48%), Gaps = 31/305 (10%)
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A+ V+ ++ + NS+I+ GRI +A +F+ + + N +S+NSMI GY V
Sbjct: 34 AVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELV 93
Query: 332 DDSKRLFEKMPHRSIISLNTMISV---IPEMER------------NPVTWNSMISGYVQN 376
+D+ RLF++M R I S MI+ I E+E+ + V N++I+GY +
Sbjct: 94 EDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKK 153
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
L +A +L+ M + + +++ + + G +Q G + E NV
Sbjct: 154 RLFREAKKLFDEM----LVKNVVSWNSILSGYTKNGKMQLG----LQFFEAMGERNVVSW 205
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+VD Y G ++ A F I +PNV +W +++G++H+G +EA LF M +++V
Sbjct: 206 NLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLV 265
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
++ ++ A VR +++ K+F M V +T +++ R G L +A E
Sbjct: 266 ----SWNAMIGAYVRENQIDDAYKLFMEMPEKDSVS----WTAMINGYVRVGKLLQAREI 317
Query: 557 IKDMP 561
+ MP
Sbjct: 318 LNLMP 322
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 210/678 (30%), Positives = 340/678 (50%), Gaps = 90/678 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G ++ AR FD + +TVV+WN ++ GY++ E+ +L M ++ + TF +L
Sbjct: 110 GNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVL 169
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ L GK+ H V+K G+ +G+ L+ Y ++ A++VFD L++ +
Sbjct: 170 DACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVS 229
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+++M+ GY AKS DG EKA +LF M++
Sbjct: 230 TFNVMIGGY-------------------------------AKSGDG-EKAFQLFYRMQQE 257
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PN +F S++ C+ A GK VH + G D + ALI Y GC + +G
Sbjct: 258 GFK-PNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEG 316
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISY--------- 318
A RV+D+++ + + +I G IEDA +F + E + I+Y
Sbjct: 317 ARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACAS 376
Query: 319 --------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
+++ YA G + D++++F+ M R ++S
Sbjct: 377 SADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVS---- 432
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
W++MI YV+N E+A + + M++ ++ T+ L +AC LG
Sbjct: 433 -------------WSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLG 479
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+L G ++ +K S++ VG +L++M + GSI A+ F ++ +V W ++
Sbjct: 480 ALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIG 539
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVV 531
GYS HG EA+ LF+ ML++ PN+ TFVGVLSAC RAG V EG + F + G+V
Sbjct: 540 GYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIV 599
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
PT+E Y C+VDLLGR+G L EAE I MP++ ++ +W LL+AC + N++V ERAA++
Sbjct: 600 PTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAER 659
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+ + YV LS++YA G W +RK + V+K+ GC+WIE+ ++H F V
Sbjct: 660 CLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVV 719
Query: 652 EDRNNPNCNVIYATLEHL 669
EDR++P IYA L L
Sbjct: 720 EDRSHPQAGEIYAELARL 737
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 136/533 (25%), Positives = 241/533 (45%), Gaps = 90/533 (16%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ T+ + C L GKQ+ +++SG + + + L+ ++ C + EA++
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD + K VV W +I+GYA+ + ++A
Sbjct: 119 FDSVE-------------------------------NKTVVTWNAIIAGYAQ-LGHVKEA 146
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
LFR M + P+ TF V+ AC+ GK H +IK GF D IG AL+
Sbjct: 147 FALFRQMVDEAME-PSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVS 205
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSIS 317
Y + DGA +V+D L ++ N +I G G E A +F R+ + N IS
Sbjct: 206 MYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRIS 265
Query: 318 YNSMIKG----------YAVYGQ------VDD-------------------SKRLFEKMP 342
+ S++ G AV+ Q VDD ++R+F+KM
Sbjct: 266 FLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMK 325
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
R ++S W MI GY +N+ E A L+ TM++ I R T+
Sbjct: 326 VRDVVS-----------------WTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYI 368
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ +AC+ L + +H+ +V+ F +++ V T+LV MY++CG+I DA+ F ++S
Sbjct: 369 HIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRR 428
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
+V +W+A++ Y +G G EA F +M ++ P+ T++ +L+AC G ++ GM+I+
Sbjct: 429 DVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIY 488
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+V + ++++ + G + A ++M ++ D V W ++
Sbjct: 489 TQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENM-VQRDVVTWNVMIGG 540
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/525 (22%), Positives = 229/525 (43%), Gaps = 58/525 (11%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G + AR +FD + R V ++N M+ GY+K +++ L M + K N +F +
Sbjct: 209 KGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLS 268
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
IL C+ +L GK +H + +G V + L+ Y C IE A+RVFD++ +
Sbjct: 269 ILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRD 328
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W++M+ GY + + + DAF +F M ++ +
Sbjct: 329 VVSWTVMIRGYAENSNIEDAFGLFATMQEEGI---------------------------- 360
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P+ T+ +I ACA + +H +++ GF D + AL+ Y C A
Sbjct: 361 -----QPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAI 415
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGY 325
A +V+D + + + +++I + G E+A F+ + E + ++Y +++
Sbjct: 416 KDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNAC 475
Query: 326 AVYGQVDDSKRLFEK---------MP-HRSIISLNTMISVIPE--------MERNPVTWN 367
G +D ++ + +P ++I++N I ++R+ VTWN
Sbjct: 476 GHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWN 535
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK- 426
MI GY + +AL L+ M K TF + ACS G +++G+ ++L+
Sbjct: 536 VMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDG 595
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVL 485
+ + +VD+ R G +++A+ + + PN + W+ L+ +G A
Sbjct: 596 RGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAER 655
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
E L + + A +V + AG+ K+ + M+S GV
Sbjct: 656 AAERCLMSEPY-DGAVYVQLSHMYAAAGMWENVAKVRKVMESRGV 699
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 229/768 (29%), Positives = 365/768 (47%), Gaps = 129/768 (16%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
++ N I + G + AR +F+Q+ R VSW ML GY++ +E++ L MH S
Sbjct: 78 IAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCS 137
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY--------- 129
V S++LS C + G+ +H V K G VG+ L+ Y
Sbjct: 138 GVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLA 197
Query: 130 ----------------------ANCFEIEEAKRVFDE----------------------- 144
A C E A +F+E
Sbjct: 198 ERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASI 257
Query: 145 --LHEDNELLWSLMLVG--------------YVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
L++ +L L+ G YV+C ++ +A ++F + +VV+W ++
Sbjct: 258 GDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLML 317
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
Y + D K+ LF M +G PNE+T+ ++R C G G+ +H L IK G
Sbjct: 318 VAYGQISD-LAKSFDLFCQMVAAGVR-PNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTG 375
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF- 307
FE D + G LI+ Y D A R+ + LE + + S+I G + ++A F
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFK 435
Query: 308 ---------NRLTEANSIS-----------------------------YNSMIKGYAVYG 329
+ + A++IS +N+++ YA G
Sbjct: 436 DMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCG 495
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
+ ++ LFE + H+ + +TWN M+SG+ Q+ L+E+AL++++ M
Sbjct: 496 RSKEAFSLFEAIEHK-----------------DKITWNGMVSGFAQSGLYEEALEVFIKM 538
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+ + TF A + L ++QG+ +HA ++KT S V +L+ +Y +CGSI
Sbjct: 539 YQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSI 598
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
DA+ F +S N +W ++ S HG G EA+ LF+ M ++ + PN TF+GVL+AC
Sbjct: 599 EDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAAC 658
Query: 510 VRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
GLV EG+ F+SM S +G+ P +HY CVVD+LGR+G L A +F+++MP+ +A+V
Sbjct: 659 SHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMV 718
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W LLSAC N+E+GE AA+ + L+ ++YV+LSN YAV GKW + +RK +
Sbjct: 719 WRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKD 778
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
V+K+PG SWIE+ + VHAF V DR +P + IY L L L +
Sbjct: 779 RGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKI 826
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 148/584 (25%), Positives = 257/584 (44%), Gaps = 53/584 (9%)
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AK + L ED + +L++ Y + L+ A VF ++ +D V W ++SGYA++ G
Sbjct: 66 AKAITCGLGED-RIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLG 124
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E+A+ L+ M SG +P Y SV+ AC + F +G++VH + K G + +G
Sbjct: 125 -EEAVGLYHQMHCSGV-VPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGN 182
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EA 313
ALI Y + A RV+ + N+LI+ G E A IF +
Sbjct: 183 ALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTP 242
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLF----------EKMPHRSIISLNTMISVIPEM---- 359
+ ++ S++ A G ++ K+L + + S++ L VI E
Sbjct: 243 DCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIF 302
Query: 360 ----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
N V WN M+ Y Q + K+ L+ M + T+ L C+ G +
Sbjct: 303 KSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEIN 362
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G+ +H +KT FES++YV L+DMYS+ G ++ A+ + + +V +WT+++ GY
Sbjct: 363 LGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYV 422
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
H EA+ F+ M I P+ +SAC + +G +I + G +
Sbjct: 423 QHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVS 482
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ---KM 592
+ +V+L R G EA + + + D + W ++S + + E A + KM
Sbjct: 483 IWNALVNLYARCGRSKEAFSLFEAIEHK-DKITWNGMVSG---FAQSGLYEEALEVFIKM 538
Query: 593 FGLDKK--------PISAYVILSN------IYAVLGKWG--KKMDIRKRLTHLEVKKDPG 636
+ K ISA L++ I+A + K G + ++ L L K
Sbjct: 539 YQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGK---- 594
Query: 637 CSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSVVLFD 680
C IE ++++ F + +RN+ + N I + L ++ LFD
Sbjct: 595 CGSIE-DAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFD 637
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 12/221 (5%)
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS---CLGSLQQ 416
R + N ++G++ + EK L L+ + + R SV F AC+ C GS++
Sbjct: 3 RRAAASLNKSLTGFLAHEDPEKLLSLFAA----KVRQCRGLGSVDF-ACALRECRGSVKH 57
Query: 417 GQL---LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L +HA + + G L+D+Y++ G + A+ F +S+ + +W A+++G
Sbjct: 58 WPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSG 117
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT 533
Y+ +GLG EAV L+ M +VP VLSAC +A L +G + + G
Sbjct: 118 YARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSE 177
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
++ L R G L AE +MP D V + L+S
Sbjct: 178 TVVGNALIALYLRFGSLSLAERVFSEMPY-CDRVTFNTLIS 217
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+++AT +T T ET + N I+ G+ G + A+ F +M R VSWNT++ S+
Sbjct: 568 QIHATVIKTGCTSETEV--ANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQ 625
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
E+L L M + +K N+ TF +L+ C+ + + +G
Sbjct: 626 HGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEG 667
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 216/756 (28%), Positives = 371/756 (49%), Gaps = 95/756 (12%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
YA + M+Q ++S N I+ G++ A F P R VVSWN+ML G+ +
Sbjct: 96 YAYKVFEKMSQRD-VISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNG 154
Query: 64 KFDESLSLVSTMHRSN-VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
+ +S+ + M RS V ++TTF+ +L C+ L G Q+H L+++ G+ G
Sbjct: 155 ECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTG 214
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK---- 178
S LL YA C ++++ ++F E+ N + WS ++ G VQ + ++F +M K
Sbjct: 215 SALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIG 274
Query: 179 -----------------------------------KDVVVWTKLISGYAKS--------- 194
D+ V T + YAK
Sbjct: 275 VSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRI 334
Query: 195 ---------------VDGCEK------ALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
+ GC + AL+ F+ + +SG NE + ACA +
Sbjct: 335 FNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGF-NEISLSGAFSACASIKG 393
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
+G+ +H L +K + + ++++ Y CEA A ++D +E + N++I
Sbjct: 394 DLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAA 453
Query: 294 LISMGRIEDAELIFNRL----TEANSISYNSMIK----------GYAVYGQVDDSKRLFE 339
G E+ +F + E + +Y S++K G ++ ++ S +
Sbjct: 454 HEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLD 513
Query: 340 KMPHRSIISLNTMISVIPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
++I + +I E ++ V+WN++I+G+ E A + M K
Sbjct: 514 SFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLK 573
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+++ T++++ AC+ L S+ G+ +H ++K S+VY+ ++LVDMYS+CG++ D
Sbjct: 574 MSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQD 633
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
+ F + + W A++ GY+ HGLG EA+ FE M +++ PN ATFV +L AC
Sbjct: 634 SALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAH 693
Query: 512 AGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
G +++G+ F +M YG+ P +EHY+C++D++GRSG + EA + I++MP E DAV+W
Sbjct: 694 MGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWR 753
Query: 571 ALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630
LLS C N+E+ E+A + L+ + SA ++LSNIYA G WGK ++RK + + +
Sbjct: 754 TLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNK 813
Query: 631 VKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
+KK+PGCSWIE+ VHAF V ++ +P IY L
Sbjct: 814 LKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKIL 849
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 147/607 (24%), Positives = 277/607 (45%), Gaps = 65/607 (10%)
Query: 72 VSTMHRSNVKLNET--TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY 129
+ST+ ++ KL TFS I+ C+ NSL GKQ H ++ SG+ ++ + L+ Y
Sbjct: 29 ISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMY 88
Query: 130 ANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
C + A +VF+++ + + + ++ M+ GY M+ A + F PK+DVV W ++S
Sbjct: 89 LRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLS 148
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
G+ ++ + C K++ +F M S E ++ TF V++AC+ L G VHGL+++ GF
Sbjct: 149 GFLQNGE-CRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGF 207
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR-IEDAEL--- 305
D G AL++ Y C+ D +++++ + +++I G + I EL
Sbjct: 208 YKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKE 267
Query: 306 ---------------IFNRLTEANSISYNSMIKGYAVY--------------------GQ 330
+F +++ + + +A+ G
Sbjct: 268 MQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGS 327
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+ D++R+F +P S+ +N++I G V+N +ALQ + +
Sbjct: 328 LADAQRIFNSLPKHSL-----------------QCYNAIIVGCVRNEKGFEALQFFQLLL 370
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
K + + S F AC+ + G+ LH+ VK+ SN+ V S++DMY +C +++
Sbjct: 371 KSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALS 430
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
+A F + + +W A++ + +G E + LF ML + P+ T+ VL AC
Sbjct: 431 EACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACS 490
Query: 511 RAGLVNEGMKIFRSMKSYGVVPTLEHYT--CVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
+N GM+I + G+ L+ + ++D+ + G + EA++ I D + V
Sbjct: 491 SQQALNSGMEIHNRIIKSGL--GLDSFVGGALIDMYCKCGMIEEAKK-IHDRIEQQTMVS 547
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPIS-AYVILSNIYAVLGKWGKKMDIRKRLT 627
W A+++ + E +M + KP + Y I+ + A L G I ++
Sbjct: 548 WNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQII 607
Query: 628 HLEVKKD 634
LE+ D
Sbjct: 608 KLELHSD 614
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 207/440 (47%), Gaps = 69/440 (15%)
Query: 200 KALKLFRW-----MRESGENMPNEY-TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
K L++F + ++++ +P + TF +I+ C+ + GK H +I GF D
Sbjct: 19 KTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDV 78
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
I L++ Y C + A +V++++ + + N++I+G G + A F +
Sbjct: 79 YISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKR 138
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMP------------------------------- 342
+ +S+NSM+ G+ G+ S +F M
Sbjct: 139 DVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQV 198
Query: 343 ---------HRSIISLNTMISVIPEMER--------------NPVTWNSMISGYVQNNLH 379
++ +++ + ++ + + +R N V W+++I+G VQN+ H
Sbjct: 199 HGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEH 258
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
L+L+ M+K+ I ++S ++ +F +C+ L +L+ G LHAH +K F S++ VGT+
Sbjct: 259 ILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTAT 318
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+DMY++CGS+ DAQ F+S+ ++ + A++ G + G EA+ F+++L+ + N
Sbjct: 319 LDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNE 378
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEE 555
+ G SAC +G R + S V TL CV +D+ G+ L EA
Sbjct: 379 ISLSGAFSACASIKGDLDG----RQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACC 434
Query: 556 FIKDMPIELDAVVWGALLSA 575
+M DAV W A+++A
Sbjct: 435 MFDEME-RRDAVSWNAVIAA 453
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 200/484 (41%), Gaps = 87/484 (17%)
Query: 3 LYATQSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGY 59
L Q +L + TL I N + G+ L A +FD+M R VSWN ++ +
Sbjct: 395 LDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAH 454
Query: 60 SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
+ +E+L+L ++M R ++ ++ T+ ++L C+ +L G +IH ++KSG
Sbjct: 455 EQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDS 514
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
FVG L+ Y C IEEAK++ D + + + W+ ++ G+ DA F +M K
Sbjct: 515 FVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKM 574
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
V P+ +T+ V+ ACA L + GK
Sbjct: 575 SV---------------------------------KPDNFTYAIVLDACANLASVGLGKQ 601
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
+HG +IK D I L++ Y C G
Sbjct: 602 IHGQIIKLELHSDVYITSTLVDMYSKC-------------------------------GN 630
Query: 300 IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
++D+ L+F + + +++N+MI GYA +G +++ FE+M + +
Sbjct: 631 MQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQ-------------LENV 677
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
N T+ S++ +K L + M + ++ +S + G + +
Sbjct: 678 RPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEAL 737
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI---SSPNVAAWTALMNGYS 475
L + + PFE++ + +L+ + G+I A+ + ++I + +A L N Y+
Sbjct: 738 KL---IQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYA 794
Query: 476 HHGL 479
G+
Sbjct: 795 DAGM 798
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 108/244 (44%), Gaps = 52/244 (21%)
Query: 378 LHEKALQLYM--TMRKLAIDRTR-----STFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
L+ K L+++ T+ L ++T+ TFS + CS SL+ G+ HA ++ + F
Sbjct: 16 LYNKTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFI 75
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+VY+ L+ MY RC +N A F +S +V ++ +++GY+ G + A F
Sbjct: 76 PDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDT 135
Query: 491 LEQDIVP--------------------------------NAATFVGVLSACVRAGLVNEG 518
++D+V + TF VL AC + L + G
Sbjct: 136 PKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKAC--SVLEDGG 193
Query: 519 MKIFRSMKSYGVVPTLEHYTCVV------DLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+ I + +G++ + Y VV D+ + L ++ + ++P++ + V W A+
Sbjct: 194 LGI----QVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVK-NWVCWSAI 248
Query: 573 LSAC 576
++ C
Sbjct: 249 IAGC 252
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 215/672 (31%), Positives = 341/672 (50%), Gaps = 101/672 (15%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L AR LF++MP R + +WNTM+ Y++ + E+ + M + V + TF++ L V
Sbjct: 125 LCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRV 184
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
C L S GKQ+H ++ G++ FVG+ L+ YA C + E +VFDE
Sbjct: 185 CGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDE--------- 235
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
M +++ V W +IS A+ AL LF M+ES +
Sbjct: 236 ----------------------MGERNQVTWNSIISAEAQ-FGHFNDALVLFLRMQESED 272
Query: 214 NM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+ P+++TF +++ CA +G+ +H LI+ + + L+ Y C
Sbjct: 273 GIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSEC------ 326
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD 332
GR+ A+ IFNR+ E N+ S+NSMI+GY G+
Sbjct: 327 -------------------------GRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQ 361
Query: 333 DSKRLFEKMPHRSI----ISLNTMIS------------------VIPEMERNPVTWNSMI 370
++ RLF++M I SL++M+S V ME + ++
Sbjct: 362 EALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLV 421
Query: 371 SGYVQNNLHEKALQLY-MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
Y + + A ++Y T++K DR + ++ + + G ++ ++++
Sbjct: 422 DMYAKCGSMDYAWKVYDQTIKK---DRNTALWNSILAGYANKGLKKESFNHFLEMLESDI 478
Query: 430 ESNVY----------VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
E +V + T+LVDMYS+CG+I A+ F +++ N+ +W A+++GYS HG
Sbjct: 479 EYDVLTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGC 538
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYT 538
EA++L+E M ++ + PN TF+ +LSAC GLV EG++IF SM+ Y + EHYT
Sbjct: 539 SKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYT 598
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
C+VDLLGR+G L +A+EF++ MPIE + WGALL AC +M++G AAQ++F LD +
Sbjct: 599 CMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQ 658
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
YVI+SNIYA G+W + DIR+ + VKKDPG SWIE+NS + F + +P
Sbjct: 659 NPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPK 718
Query: 659 CNVIYATLEHLT 670
IY L HLT
Sbjct: 719 TEEIYNNLRHLT 730
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 148/603 (24%), Positives = 271/603 (44%), Gaps = 96/603 (15%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE---A 138
+N +S+++ C NS GK IH ++ +GY ++ + +L YA +++ A
Sbjct: 69 VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+++F+E MP++++ W +I YA+ VD
Sbjct: 129 RKLFEE-------------------------------MPERNLTAWNTMILAYAR-VDDY 156
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+A +F M + G P+ +TF S +R C L + GK VH LI CGF+ D +G A
Sbjct: 157 MEAWGIFDRMLKIGV-CPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNA 215
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----- 313
LI+ Y C+ + ++V+D + NS+I+ G DA ++F R+ E+
Sbjct: 216 LIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQ 275
Query: 314 -NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------- 359
+ ++ +++ A Q +D++ + H +I N ++I E
Sbjct: 276 PDQFTFTTLLTLCA--NQRNDNQ---GRQIHAHLIRANITKNIIVETELVHMYSECGRLN 330
Query: 360 ----------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
ERN +WNSMI GY QN ++AL+L+ M+ I + S + +C
Sbjct: 331 YAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCV 390
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI--SSPNVAAW 467
L Q+G+ LH +V+ E + LVDMY++CGS++ A + N A W
Sbjct: 391 SLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALW 450
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV----------RAGLVNE 517
+++ GY++ GL E+ F MLE DI + T V +++ V + G + +
Sbjct: 451 NSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLLVLETALVDMYSKCGAITK 510
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP---IELDAVVWGALLS 574
+F +M +V + ++ + G EA ++MP + + V + A+LS
Sbjct: 511 ARTVFDNMNGKNIVS----WNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILS 566
Query: 575 ACWFWMNMEVGER---AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
AC +E G R + Q+ + ++ K Y + ++ LG+ G+ D ++ + + +
Sbjct: 567 ACSHTGLVEEGLRIFTSMQEDYNIEAKA-EHYTCMVDL---LGRAGRLEDAKEFVEKMPI 622
Query: 632 KKD 634
+ +
Sbjct: 623 EPE 625
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 183/437 (41%), Gaps = 97/437 (22%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
+ECGR L A+ +F++M R SWN+M+ GY + + E+L L M + +K +
Sbjct: 324 SECGR---LNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCF 380
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+ S++LS C L+ G+++H ++++ E + L+ YA C ++ A +V+D+
Sbjct: 381 SLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQT 440
Query: 146 --HEDNELLWSLMLVGYV------------------------------------------ 161
+ N LW+ +L GY
Sbjct: 441 IKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLLVLETALVD 500
Query: 162 ---QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPN 217
+C ++ A VF M K++V W +ISGY+K GC K AL L+ M + G PN
Sbjct: 501 MYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKH--GCSKEALILYEEMPKKGM-YPN 557
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
E TF +++ AC+ G V GL I + D +I + C + A R+ D
Sbjct: 558 EVTFLAILSACSHTGL-----VEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLED 612
Query: 278 RLE-------NPCLNASNSLINGL-----ISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
E P ++ +L+ + MGR+ A+ +F L N Y M Y
Sbjct: 613 AKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLA-AQRLF-ELDPQNPGPYVIMSNIY 670
Query: 326 AVYG---QVDDSKRLF-----EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
A G +V+D +++ +K P S I +N+ I + + +
Sbjct: 671 AAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIF----------------HAGSK 714
Query: 378 LHEKALQLYMTMRKLAI 394
H K ++Y +R L +
Sbjct: 715 THPKTEEIYNNLRHLTL 731
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 121/317 (38%), Gaps = 63/317 (19%)
Query: 10 TLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL 69
T++T L+V + + G + AR +FD M + +VSWN M+ GYSK E+L
Sbjct: 484 TMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEAL 543
Query: 70 SLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY 129
L M + + NE TF ILS C+ +GL
Sbjct: 544 ILYEEMPKKGMYPNEVTFLAILSACSH--------------------------TGL---- 573
Query: 130 ANCFEIEEAKRVFDELHEDNEL-----LWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVV 183
+EE R+F + ED + ++ M+ + + DA + KMP + +V
Sbjct: 574 -----VEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVST 628
Query: 184 WTKLISG--YAKSVD-GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
W L+ K +D G A +LF E P Y S I A A G + E + +
Sbjct: 629 WGALLGACRVHKDMDMGRLAAQRLF----ELDPQNPGPYVIMSNIYAAA--GRWKEVEDI 682
Query: 241 HGLLIKCGFEFDESIGGALIE-----FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI 295
++ G + D + I F+ G + +Y+ L + L +
Sbjct: 683 RQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSK-------- 734
Query: 296 SMGRIEDAELIFNRLTE 312
+G I D I + +
Sbjct: 735 GLGYIPDTSFILQNVKD 751
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
K A D +S L C S Q+G+ +H ++ + + Y+ T ++ +Y+R G ++
Sbjct: 64 KPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLD 123
Query: 451 D---AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
D A+ F + N+ AW ++ Y+ EA +F+ ML+ + P+ TF L
Sbjct: 124 DLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALR 183
Query: 508 ACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C + G ++ + + G ++D+ + + +M E + V
Sbjct: 184 VCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMG-ERNQV 242
Query: 568 VWGALLSA 575
W +++SA
Sbjct: 243 TWNSIISA 250
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 220/673 (32%), Positives = 344/673 (51%), Gaps = 61/673 (9%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
++G++ AR +FD + ++T V+W ++ GY+K + + SL L + M SNV ++ S
Sbjct: 188 AKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLS 247
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+IL+ C+ L L GKQIH VL+S + + L+ FY C ++ K +FD L
Sbjct: 248 SILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRL--- 304
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
DV K+++ WT +I+GY ++ E A++L M
Sbjct: 305 ----------------------DV------KNIISWTTMIAGYMQNSYDWE-AVELVGEM 335
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
G P+EY SV+ +C + A G+ +H +IK E D + ALI+ Y C A
Sbjct: 336 FRMGWK-PDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNA 394
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN-SISYNSMIK---- 323
D A RV+D + + N++I G G + A +F + + S S+ + +
Sbjct: 395 LDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGL 454
Query: 324 ---------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTW 366
++G + +K ++I + + S I + ++ V W
Sbjct: 455 SAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVW 514
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACSCLGSLQQGQLLHAH 423
NS+ SGY E+A +LY L + R R TF+ L A S L SL GQ H
Sbjct: 515 NSLFSGYNLQLKSEEAFKLY---SDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQ 571
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
++K ES+ ++ +LVDMY++CGS+ +A+ FSS + A W ++++ Y+ HG EA
Sbjct: 572 VMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEA 631
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
+ +FE M+ +I PN TFV VLSAC G V +G++ + SM YG+ P +EHY VV L
Sbjct: 632 LRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTL 691
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
LGR+G L EA EFI+ M I A+VW +LLSAC + N+E+ + AA+ +D +Y
Sbjct: 692 LGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSY 751
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
V+LSNI+A G WG +R ++ V K+PG SWIE+N VH F D+ + ++IY
Sbjct: 752 VMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIY 811
Query: 664 ATLEHLTANLNSV 676
L+ LT + V
Sbjct: 812 LALDELTTQMKDV 824
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 148/583 (25%), Positives = 255/583 (43%), Gaps = 91/583 (15%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV-KLNETTFSTI 90
G + A LFD+MP R +VSW++++ Y++ +++L R+ V KLNE ++I
Sbjct: 89 GSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASI 148
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
+ C Q + G Q+H V+KSG+ +VG+ L+ YA EI++A+ VFD L
Sbjct: 149 IRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGL----- 203
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+K P V WT +I+GY KS E +L+LF M E
Sbjct: 204 ----------------------VLKTP----VTWTAIITGYTKS-GRSEVSLQLFNLMME 236
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
S +P++Y S++ AC+ LG GK +H +++ + D S LI+FY C
Sbjct: 237 SNV-IPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVK 295
Query: 271 GAMRVYDRLENPCLNASNSLING----------------LISMGRIEDAELIFNRLTEAN 314
++DRL+ + + ++I G + MG D + LT
Sbjct: 296 AGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCG 355
Query: 315 SI----------SY-------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
S+ SY N++I Y+ +DD+KR+F+ + S+
Sbjct: 356 SVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSV----- 410
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
V +N+MI GY + AL+++ MR + + TF L + L
Sbjct: 411 ------------VYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAAL 458
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
LQ + +H ++K F + + ++L+D+YS+C I DA+ F ++ ++ W +L
Sbjct: 459 LCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLF 518
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
+GY+ EA L+ + PN TF + +A + G + + G+
Sbjct: 519 SGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLE 578
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+VD+ + G + EAE+ + D W +++S
Sbjct: 579 SDPFITNALVDMYAKCGSVEEAEKIFSS-SVWKDTACWNSMIS 620
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/590 (23%), Positives = 255/590 (43%), Gaps = 102/590 (17%)
Query: 50 VSWNTMLCGYSKWAKFDESLS-----LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
++W + ++ KF S+S ++ + NVK+ + +L S++ +
Sbjct: 1 MNWAYLPTTSTRSCKFFSSISPNVQPMLPSFSSQNVKVKGRALANLLLAPVSNKSILYYR 60
Query: 105 QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
++HC V+ G + F+ + LL Y + +A +FD
Sbjct: 61 KVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFD--------------------- 99
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
KMP +++V W+ ++S Y + + EKAL F + + + NEY S+
Sbjct: 100 ----------KMPNRNLVSWSSVVSMYTQ-LGYNEKALLYFLEFQRTCVDKLNEYILASI 148
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
IRAC + G VH +IK GF D +G +L+ Y D A V+D L
Sbjct: 149 IRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTP 208
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTEANSI---------------------------- 316
++I G GR E + +FN + E+N I
Sbjct: 209 VTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAY 268
Query: 317 -----------SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
+YN +I Y G+V K LF+++ ++IIS
Sbjct: 269 VLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIIS----------------- 311
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
W +MI+GY+QN+ +A++L M ++ S + +C + +LQ G+ +H++++
Sbjct: 312 WTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVI 371
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K E + +V +L+DMYS+C +++DA+ F ++ +V + A++ GYS G A+
Sbjct: 372 KVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALE 431
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT--CVVDL 543
+F+ M + + P+ TFV +L + +I + YG +L+ +T ++D+
Sbjct: 432 VFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGF--SLDKFTSSALIDV 489
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
+ + +A ++ + D VVW +L S N+++ A K++
Sbjct: 490 YSKCSCIRDA-RYVFEGTTNKDIVVWNSLFSG----YNLQLKSEEAFKLY 534
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 220/494 (44%), Gaps = 62/494 (12%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
Y +S+T M T V + T+CGR + + LFD++ ++ ++SW TM+ GY + +
Sbjct: 268 YVLRSETKMDVSTYNVLID-FYTKCGR---VKAGKALFDRLDVKNIISWTTMIAGYMQNS 323
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS 123
E++ LV M R K +E S++L+ C +++L G+QIH V+K E FV +
Sbjct: 324 YDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTN 383
Query: 124 GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
L+ Y+ C +++AKRVFD V C+ VV
Sbjct: 384 ALIDMYSKCNALDDAKRVFD----------------VVTCH---------------SVVY 412
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
+ +I GY++ C AL++F+ MR + P+ TF S++ A L K +HGL
Sbjct: 413 YNAMIEGYSRQGYLC-GALEVFQEMRLKHVS-PSFLTFVSLLGLSAALLCLQLSKQIHGL 470
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL--------- 294
+IK GF D+ ALI+ Y C A V++ N + NSL +G
Sbjct: 471 IIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEA 530
Query: 295 ------ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
+ + R E F LT A SI S+ G + QV + +++
Sbjct: 531 FKLYSDLQLSRERPNEFTFAALTTAASI-LASLPHGQQFHNQVMKMGLESDPFITNALVD 589
Query: 349 LNTMISVIPEME--------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+ + E E ++ WNSMIS Y Q+ E+AL+++ TM I+ T
Sbjct: 590 MYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVT 649
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
F + ACS +G ++ G + + + E + S+V + R G + +A+ ++
Sbjct: 650 FVSVLSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMT 709
Query: 461 -SPNVAAWTALMNG 473
P W +L++
Sbjct: 710 IRPAALVWRSLLSA 723
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 29/287 (10%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N ++ Y G V D+ LF+KMP+R N V+W+S++S Y Q
Sbjct: 79 NLLLHSYFKIGSVFDAGTLFDKMPNR-----------------NLVSWSSVVSMYTQLGY 121
Query: 379 HEKALQLYMTMRKLAIDR-TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+EKAL ++ ++ +D+ + + AC + G +H++++K+ F +VYVGT
Sbjct: 122 NEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGT 181
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SLV +Y++ G I+ A+ F + WTA++ GY+ G ++ LF +M+E +++P
Sbjct: 182 SLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIP 241
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
+ +L+AC G + G +I + + Y ++D + G + +
Sbjct: 242 DKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALF 301
Query: 558 KDMPIELDAVVWGALLSA----CWFWMNME-VGERAAQKMFGLDKKP 599
+ ++ + + W +++ + W +E VGE MF + KP
Sbjct: 302 DRLDVK-NIISWTTMIAGYMQNSYDWEAVELVGE-----MFRMGWKP 342
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 212/678 (31%), Positives = 344/678 (50%), Gaps = 90/678 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD + +TVV+WN ++ GY++ E+ +L M ++ + TF ++L
Sbjct: 106 GNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVL 165
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ L GK++H V+ +G+ +G+ L+ Y +++A++VFD LH +
Sbjct: 166 DACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVS 225
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+++M+ GY AKS D EKA +LF M++
Sbjct: 226 TFNVMVGGY-------------------------------AKSGD-WEKAFELFYRMQQV 253
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PN+ +F S++ C A GK VH + G D + +LI Y C + +G
Sbjct: 254 GLK-PNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEG 312
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE---------------ANSI 316
A RV+D ++ + + +I G G IEDA +F + E A +I
Sbjct: 313 ARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAI 372
Query: 317 SYN------------------------SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
S N +++ YA G + D++++F+ MP R ++S
Sbjct: 373 SANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVS---- 428
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
W++MI YV+N +A + + M++ I+ T+ L +AC LG
Sbjct: 429 -------------WSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLG 475
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+L G ++ +K S+V +G +L+ M ++ GS+ A+ F ++ +V W A++
Sbjct: 476 ALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIG 535
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVV 531
GYS HG EA+ LF+ ML++ PN+ TFVGVLSAC RAG V+EG + F ++ G+V
Sbjct: 536 GYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIV 595
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
PT++ Y C+VDLLGR+G L EAE IK MP++ + +W +LL AC N++V ERAA++
Sbjct: 596 PTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAER 655
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+D + YV LS++YA G W +RK + ++K+ GC+WIE+ +VH F V
Sbjct: 656 CLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVV 715
Query: 652 EDRNNPNCNVIYATLEHL 669
EDR++P IYA L L
Sbjct: 716 EDRSHPLVGEIYAELARL 733
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 239/516 (46%), Gaps = 56/516 (10%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ T+ + C +L GKQ+ +++ G + + + L+ Y+ C + EA+++
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD + K VV W LI+GYA+ V ++A
Sbjct: 115 FDSVE-------------------------------NKTVVTWNALIAGYAQ-VGHVKEA 142
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
LFR M + G P+ TF SV+ AC+ GK VH ++ GF D IG AL+
Sbjct: 143 FALFRQMVDEGLE-PSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVS 201
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSIS 317
Y + D A +V+D L ++ N ++ G G E A +F R+ + N IS
Sbjct: 202 MYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKIS 261
Query: 318 YNSMIKG----------YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER------ 361
+ S++ G AV+ Q ++ + + S+I + T I R
Sbjct: 262 FLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMK 321
Query: 362 --NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
+ V+W MI GY +N E A L+ TM++ I R T+ + +AC+ +L +
Sbjct: 322 VRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHARE 381
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+H+ + F +++ V T+LV MY++CG+I DA+ F ++ +V +W+A++ Y +G
Sbjct: 382 IHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGY 441
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
G+EA F +M +I P+ T++ +L+AC G ++ GM+I+ +V +
Sbjct: 442 GTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNA 501
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ + + G + A +I D + D + W A++
Sbjct: 502 LIIMNAKHGSVERA-RYIFDTMVRRDVITWNAMIGG 536
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/525 (22%), Positives = 225/525 (42%), Gaps = 58/525 (11%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G + AR +FD + IR V ++N M+ GY+K ++++ L M + +K N+ +F +
Sbjct: 205 KGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLS 264
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
IL C +L GK +H + +G V + L+ Y C IE A+RVFD + +
Sbjct: 265 ILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRD 324
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W++M+ GY + + DAF +F M ++ +
Sbjct: 325 VVSWTVMIEGYAENGNIEDAFGLFATMQEEGI---------------------------- 356
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P+ T+ ++ ACA + +H + GF D + AL+ Y C A
Sbjct: 357 -----QPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAI 411
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIKGY 325
A +V+D + + + +++I + G +A F+ + +N ++Y +++
Sbjct: 412 KDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNAC 471
Query: 326 AVYGQVDDSKRLFEKMPHRSIISL----NTMISVIPE--------------MERNPVTWN 367
G +D ++ + ++S N +I + + + R+ +TWN
Sbjct: 472 GHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWN 531
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK- 426
+MI GY + +AL L+ M K TF + ACS G + +G+ +L++
Sbjct: 532 AMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEG 591
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVL 485
V + +VD+ R G +++A+ S+ P + W++L+ HG A
Sbjct: 592 RGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAER 651
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
E L D + A +V + AG+ K+ + M+S G+
Sbjct: 652 AAERCLMIDPY-DGAVYVQLSHMYAAAGMWENVAKVRKVMESRGI 695
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 181/386 (46%), Gaps = 23/386 (5%)
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G N + T+ + + C L GK V +I+ G + + LI+ Y C
Sbjct: 51 GGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTE 110
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIK---- 323
A +++D +EN + N+LI G +G +++A +F ++ E + I++ S++
Sbjct: 111 ARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSS 170
Query: 324 ------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTWNSM 369
G V+ QV + + + +++S+ + + R+ T+N M
Sbjct: 171 PAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVM 230
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ GY ++ EKA +L+ M+++ + + +F + C +L G+ +HA +
Sbjct: 231 VGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGL 290
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
++ V TSL+ MY+ CGSI A+ F ++ +V +WT ++ GY+ +G +A LF
Sbjct: 291 VDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFAT 350
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
M E+ I P+ T++ +++AC + +N +I + G L T +V + + G
Sbjct: 351 MQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGA 410
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSA 575
+ +A + MP D V W A++ A
Sbjct: 411 IKDARQVFDAMP-RRDVVSWSAMIGA 435
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I ++G + AR +FD M R V++WN M+ GYS E+L L M + +
Sbjct: 500 NALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFR 559
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKS 113
N TF +LS C++ + +G++ +L+
Sbjct: 560 PNSVTFVGVLSACSRAGFVDEGRRFFTYLLEG 591
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 210/674 (31%), Positives = 346/674 (51%), Gaps = 96/674 (14%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
I+S N IT R GQ+ AR +FD+M + ++SWN+++ GY + + E+ ++ M
Sbjct: 96 NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
N N L+ G Y N I
Sbjct: 156 SERNT--------------ISWNGLVSG-------------------------YINNGMI 176
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
EA+ VFD + E N + W+ M+ GYV+ ++S+A +F +MP+K+VV WT ++ G +
Sbjct: 177 NEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQE- 235
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
++A +LF M E V+ +G +C+
Sbjct: 236 GRIDEACRLFDMMPEK-----------DVVTRTNMIGGYCQV------------------ 266
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
G L+E A ++D + + + ++I G + +++ A +F + E N
Sbjct: 267 -GRLVE----------ARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNE 315
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ER 361
+S+ +M+KGY G++D++ LF MP +S+++ N MI V +M E+
Sbjct: 316 VSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREK 375
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ TW++MI Y + L AL+L+ M++ I + + C+ L +L G+ +H
Sbjct: 376 DEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIH 435
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
A LV++ F+ +VYV + L+ MY +CG++ A+ F + +V W +++ GY+ HGLG
Sbjct: 436 AQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGV 495
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCV 540
EA+ +F M I+P+ TFVGVLSAC G V +G++IF SM++ Y V +EHY C+
Sbjct: 496 EALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACM 555
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
VDLLGR+G L+EA + I+ MP+E DA++WGALL AC M +++ E AA+K+ L+ K
Sbjct: 556 VDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNA 615
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN-NPNC 659
+++LSNIYA G+W ++R+ + V K PGCSWI + +VH F+ D + +P
Sbjct: 616 GPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEH 675
Query: 660 NVIYATLEHLTANL 673
+ I LE L+ L
Sbjct: 676 SEINRILEWLSGLL 689
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 175/414 (42%), Gaps = 67/414 (16%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS + + G + A LF QMP + VVSW ML G + + DE+ L
Sbjct: 188 ERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDM 247
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M +V T + ++ Q+ L++ + + + + + + +G Y +
Sbjct: 248 MPEKDV----VTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITG----YVQNQQ 299
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV------------ 182
++ A+++F+ + E NE+ W+ ML GY C + +A ++F MP K VV
Sbjct: 300 VDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQN 359
Query: 183 -------------------VWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFD 222
W+ +I Y + G E AL+LFR M+ G PN +
Sbjct: 360 GEVPKARQVFDQMREKDEGTWSAMIKVYERK--GLELDALELFRMMQREGIR-PNFPSLI 416
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
SV+ CA L G+ +H L++ F+ D + L+ Y C A +V+DR
Sbjct: 417 SVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVK 476
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEA-------------NSISYNSMI-KGYAVY 328
+ NS+I G G +A +F+ + + ++ SY + KG ++
Sbjct: 477 DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIF 536
Query: 329 GQVDDSKRLFEKMPHRSII--------SLNTMISVIPE--MERNPVTWNSMISG 372
++ ++ +K+ H + + LN + +I + ME + + W +++
Sbjct: 537 NSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 209/674 (31%), Positives = 349/674 (51%), Gaps = 96/674 (14%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
I+S N IT R GQ+ AR +FD+M + ++SWN+++ GY + + E+ ++ M
Sbjct: 96 NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
N N L+ G ++ +G+ I
Sbjct: 156 SERNT--------------ISWNGLVSG----------------YINNGM---------I 176
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
EA+ VFD + E N + W+ M+ GYV+ ++S+A +F +MP+K+VV WT ++ G +
Sbjct: 177 NEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQE- 235
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
++A +LF M E V+ +G +C+
Sbjct: 236 GRIDEACRLFDMMPEK-----------DVVTRTNMIGGYCQV------------------ 266
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
G L+E A ++D + + + ++I G + +++ A +F + E N
Sbjct: 267 -GRLVE----------ARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNE 315
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ER 361
+S+ +M+KGY G++D++ LF MP +S+++ N MI V +M E+
Sbjct: 316 VSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREK 375
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ TW++MI Y + L AL+L+ M++ I + + C+ L +L G+ +H
Sbjct: 376 DEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIH 435
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
A LV++ F+ +VYV + L+ MY +CG++ A+ F + +V W +++ GY+ HGLG
Sbjct: 436 AQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGV 495
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCV 540
EA+ +F M I+P+ TFVGVLSAC G V +G++IF SM++ Y V +EHY C+
Sbjct: 496 EALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACM 555
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
VDLLGR+G L+EA + I+ MP+E DA++WGALL AC M +++ E AA+K+ L+ K
Sbjct: 556 VDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNA 615
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN-NPNC 659
+++LSNIYA G+W ++R+ + V K PGCSWI + +VH F+ D + +P
Sbjct: 616 GPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEH 675
Query: 660 NVIYATLEHLTANL 673
+ I LE L+ L
Sbjct: 676 SEINRILEWLSGLL 689
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 175/414 (42%), Gaps = 67/414 (16%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS + + G + A LF QMP + VVSW ML G + + DE+ L
Sbjct: 188 ERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDM 247
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M +V T + ++ Q+ L++ + + + + + + +G Y +
Sbjct: 248 MPEKDV----VTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITG----YVQNQQ 299
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV------------ 182
++ A+++F+ + E NE+ W+ ML GY C + +A ++F MP K VV
Sbjct: 300 VDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQN 359
Query: 183 -------------------VWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFD 222
W+ +I Y + G E AL+LFR M+ G PN +
Sbjct: 360 GEVPKARQVFDQMREKDEGTWSAMIKVYERK--GLELDALELFRMMQREGIR-PNFPSLI 416
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
SV+ CA L G+ +H L++ F+ D + L+ Y C A +V+DR
Sbjct: 417 SVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVK 476
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEA-------------NSISYNSMI-KGYAVY 328
+ NS+I G G +A +F+ + + ++ SY + KG ++
Sbjct: 477 DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIF 536
Query: 329 GQVDDSKRLFEKMPHRSII--------SLNTMISVIPE--MERNPVTWNSMISG 372
++ ++ +K+ H + + LN + +I + ME + + W +++
Sbjct: 537 NSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 216/674 (32%), Positives = 350/674 (51%), Gaps = 59/674 (8%)
Query: 21 TNKAITECGRNGQLVTARNLFDQM-PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N + G G + AR +FD+ R VSWN ++ Y K + +++ + M S
Sbjct: 45 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 104
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
++ E FS +++ C ++ G+Q+H +V++ GYE F + L+ Y ++ A
Sbjct: 105 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 164
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+F+ KMP DVV W LISG ++G +
Sbjct: 165 VIFE-------------------------------KMPDSDVVSWNALISGCV--LNGHD 191
Query: 200 -KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+A++L M+ SG +PN + S+++ACA GAF G+ +HG +IK + D+ IG
Sbjct: 192 HRAIELLLQMKSSGL-VPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVG 250
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----------N 308
L++ Y D AM+V+D + + L N+LI+G GR ++A IF N
Sbjct: 251 LVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVN 310
Query: 309 RLTEANSISYNSMIKGYAVYGQV----DDSKRLFEKMPHRSIIS-------LNTMISVIP 357
R T A + + ++ + QV + +F+ +I L+ I V
Sbjct: 311 RTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFE 370
Query: 358 EMERNPV-TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
E + SMI+ Q + E A++L+M M + ++ S L +AC+ L + +Q
Sbjct: 371 ECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 430
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +HAHL+K F S+ + G +LV Y++CGSI DA+ +FSS+ V +W+A++ G +
Sbjct: 431 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 490
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLE 535
HG G A+ LF M+++ I PN T VL AC AGLV+E + F SMK +G+ T E
Sbjct: 491 HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEE 550
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
HY+C++DLLGR+G L +A E + MP + +A VWGALL A + E+G+ AA+K+F L
Sbjct: 551 HYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFIL 610
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN 655
+ + +V+L+N YA G W + +RK + +KK+P SW+E+ +VH F V D++
Sbjct: 611 EPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKS 670
Query: 656 NPNCNVIYATLEHL 669
+P IY+ L+ L
Sbjct: 671 HPMTKEIYSKLDEL 684
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/566 (21%), Positives = 226/566 (39%), Gaps = 104/566 (18%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M E + + N + + G++ A +F++MP VVSWN ++ G ++ L
Sbjct: 138 MGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIEL 197
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ M S + N S+IL CA + G+QIH ++K+ + +++G GL+ YA
Sbjct: 198 LLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 257
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+++A +VFD + + +LW+ ++ G +AF +F + K+ + V
Sbjct: 258 NHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGV-------- 309
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
N T +V+++ A L A + VH L K GF F
Sbjct: 310 -------------------------NRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 344
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF---- 307
D + LI+ Y C A+RV++ + + A S+I L E A +F
Sbjct: 345 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEML 404
Query: 308 -----------------------------------NRLTEANSISYNSMIKGYAVYGQVD 332
R +++ + N+++ YA G ++
Sbjct: 405 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 464
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
D++ F +P R ++S W++MI G Q+ ++AL+L+ M
Sbjct: 465 DAELAFSSLPERGVVS-----------------WSAMIGGLAQHGHGKRALELFGRMVDE 507
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSIND 451
I+ T + + AC+ G + + + + + + + ++D+ R G ++D
Sbjct: 508 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 567
Query: 452 AQASFSSIS-SPNVAAWTALMNGYSHH------GLGSEAVLLFEIMLEQDIVPNAATFVG 504
A +S+ N + W AL+ H L +E + + E + T V
Sbjct: 568 AMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILE-------PEKSGTHVL 620
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGV 530
+ + +G+ NE K+ + MK +
Sbjct: 621 LANTYASSGMWNEVAKVRKLMKDSNI 646
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 141/334 (42%), Gaps = 64/334 (19%)
Query: 217 NEYTFDSVIRAC--ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
NE+ V++ A+LGA VH + + GF D + AL+ Y G D A R
Sbjct: 9 NEFALPVVLKCVPDAQLGA-----QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARR 63
Query: 275 VYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRLT---------------------- 311
V+D + S N L++ + + DA +F +
Sbjct: 64 VFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSR 123
Query: 312 -----------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
E + + N+++ Y G+VD + +FEKMP ++S
Sbjct: 124 NIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS------ 177
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
WN++ISG V N +A++L + M+ + S + AC+ G+
Sbjct: 178 -----------WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAF 226
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
G+ +H ++K +S+ Y+G LVDMY++ ++DA F +S ++ W AL++G
Sbjct: 227 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGC 286
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
SH G EA +F + ++ + N T VL +
Sbjct: 287 SHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 320
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWT 468
C+ Q G +HA + T F S+V+V +LV MY G ++DA+ F S N +W
Sbjct: 19 CVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWN 78
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
LM+ Y + +A+ +F M+ I P F V++AC + ++ G ++ +
Sbjct: 79 GLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRM 138
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
G + +VD+ + G + A + MP + D V W AL+S C
Sbjct: 139 GYEKDVFTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGC 185
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 206/638 (32%), Positives = 326/638 (51%), Gaps = 85/638 (13%)
Query: 39 NLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNETTFSTILSVCAQL 97
LF MP R VS+N ++ G+S S+ L + R +V+ T S ++ V + L
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159
Query: 98 NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
+ G +HC VL+ G+ + FVGS L+ YA I +A+RVF E+ ++++ ++
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMP 216
G ++C ++ DA +F M +D + WT +++G + +G + +AL +FR MR G +
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQ--NGLQLEALDVFRRMRAEGVGI- 276
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
++YTF S++ AC L A EGK +H + + +E + +G AL++ Y C +
Sbjct: 277 DQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRS-------- 328
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
I AE +F R+T N IS+ +MI GY +++ R
Sbjct: 329 -----------------------IRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVR 365
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
F +M M + P + T S+IS
Sbjct: 366 AFSEM---------QMDGIKP----DDFTLGSVIS------------------------- 387
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+C+ L SL++G H + + + V +LV +Y +CGSI DA F
Sbjct: 388 ----------SCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLF 437
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+S + +WTAL+ GY+ G E + LFE ML + P+ TF+GVLSAC RAGLV
Sbjct: 438 DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVE 497
Query: 517 EGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+G F SM K + +VP +HYTC++DL RSG EAEEFIK MP DA W LLS+
Sbjct: 498 KGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Query: 576 CWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
C NME+G+ AA+ + D + ++YV+L +++A G+W + +R+ + +VKK+P
Sbjct: 558 CRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEP 617
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
GCSWI+ ++VH FS +D+++P + IY LE L + +
Sbjct: 618 GCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/515 (23%), Positives = 209/515 (40%), Gaps = 115/515 (22%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N IT R + A+ LF M R ++W TM+ G ++ E+L + M
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V +++ TF +IL+ C L + +GKQIH + ++ YE FVGS L+ Y+
Sbjct: 272 EGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYS------- 324
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+C + A VF +M ++++ WT +I GY + +
Sbjct: 325 ------------------------KCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQ--NA 358
Query: 198 C-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
C E+A++ F M+ G P+++T SVI +CA L + EG H L + G ++
Sbjct: 359 CSEEAVRAFSEMQMDGIK-PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVS 417
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
AL+ Y C G IEDA +F+ ++ + +
Sbjct: 418 NALVTLYGKC-------------------------------GSIEDAHRLFDEMSFHDQV 446
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S+ +++ GYA +G+ ++ LFEKM ++ ++ + VT+ ++S +
Sbjct: 447 SWTALVTGYAQFGKAKETIDLFEKM-------------LVNGLKPDGVTFIGVLSACSRA 493
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
L EK C S+Q+ + P + +
Sbjct: 494 GLVEK-------------------------GCDYFDSMQKDHDI------VPIDDHY--- 519
Query: 437 TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
T ++D+YSR G +A+ + SP+ W L++ G E +LE D
Sbjct: 520 TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETD- 578
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
N A++V + S G E + R M+ V
Sbjct: 579 PQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 218/732 (29%), Positives = 361/732 (49%), Gaps = 131/732 (17%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW-AKFDESLSLVSTMHRS 78
S N A++ R G L AR+L MP R VSWNT++ ++ E++ + M
Sbjct: 76 SYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRMRAE 135
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ T +++LS C L +L DG++ H + +K G + +FV + LL Y C +
Sbjct: 136 GLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSV--- 192
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
DA +F M + + V +T ++ G A++
Sbjct: 193 ----------------------------GDAVRLFYGMARPNEVSFTAMMGGLAQT-GSI 223
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARL--------GAFCEGKVVHGLLIKCGFE 250
+ AL+LF M SG + + + SV+ ACA+ AF G+ +H L+++ GF
Sbjct: 224 DDALRLFARMCRSGVPV-DPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFG 282
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR----------- 299
D+ +G +LI+ Y C D A++V++ L + + + N LI G G
Sbjct: 283 SDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLM 342
Query: 300 ------------------------IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
+ A +F++++ + ++N+++ GY Q D+
Sbjct: 343 QEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTI 402
Query: 336 RLFEKM------PHRSIISL---------------------------NTMI--------- 353
LF +M P R+ +++ N M
Sbjct: 403 ELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMY 462
Query: 354 ----------SVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
S+ +M ER+ V WNS+ISG ++L+++A + MR+ I T S+++
Sbjct: 463 SKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYA 522
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ ++CS L S+ G+ +HA ++K ++ NVYVG++L+DMY++CG+++DA+ F ++
Sbjct: 523 SMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMK 582
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
N+ AW +++GY+ +GLG +AV LFE ML + P+A TF+ VL+ C +GLV++ M F
Sbjct: 583 NIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFF 642
Query: 523 RSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMN 581
SM+ SYG++P EHYTC++D LGR+G E E I MP + D ++W LL+AC N
Sbjct: 643 NSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHN 702
Query: 582 MEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
E+G+ AA+ +F +D K S YV+LSNIYA LG+ G +R +++ V K G SWI+
Sbjct: 703 AELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWID 762
Query: 642 LNSRVHAFSVED 653
V AF V D
Sbjct: 763 QKDGVRAFMVAD 774
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/579 (22%), Positives = 255/579 (44%), Gaps = 104/579 (17%)
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
F+ + L+ Y+ A F L N+ ++ L + + A D+ MP++
Sbjct: 44 FLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRR 103
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
+ V W +IS A+S +A++++ MR G +P +T SV+ AC L A +G+
Sbjct: 104 NAVSWNTVISALARSPGDGGEAVEMYGRMRAEGL-LPTHFTLASVLSACGGLAALGDGRR 162
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
HG+ +K G + ++ + AL+ Y C + A+R++ + P + +++ GL G
Sbjct: 163 CHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGS 222
Query: 300 IEDAELIFNRL-------------------TEANSISY---------------------- 318
I+DA +F R+ +A + Y
Sbjct: 223 IDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFG 282
Query: 319 ------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI----------------SVI 356
NS+I Y ++D++ ++FE +P +I+S N +I S++
Sbjct: 283 SDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLM 342
Query: 357 PEMERNP---------------------------------VTWNSMISGYVQNNLHEKAL 383
E P TWN+++SGY Q H+ +
Sbjct: 343 QEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTI 402
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+L+ M+ + R+T +V+ +CS LG L G+ +H+ V+ ++++V + LVDMY
Sbjct: 403 ELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMY 462
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
S+CG I A++ F+ ++ +V W ++++G + H L EA F+ M E I+P +++
Sbjct: 463 SKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYA 522
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
++++C R + G +I + G + + ++D+ + G++ +A F M ++
Sbjct: 523 SMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMK 582
Query: 564 LDAVVWGALLSACWFWMNMEVGERAA---QKMFGLDKKP 599
+ V W ++ + +G++A + M ++KP
Sbjct: 583 -NIVAWNEMIHG---YAQNGLGDKAVELFEYMLTTEQKP 617
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 173/371 (46%), Gaps = 77/371 (20%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V+ + + C + + +AR +FD++ +V +WNT+L GY + + +++ L M
Sbjct: 352 VTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQ 411
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
NV+ + TT + ILS C++L L G+Q+H ++ FV SGL+ Y+ C +I A
Sbjct: 412 NVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIA 471
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +F+++ E + + W+ ++ G +L +AFD
Sbjct: 472 RSIFNKMTERDVVCWNSIISGLTIHSLNKEAFD--------------------------- 504
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
F+ MRE+G MP E ++ S+I +C+RL + G+ +H ++K G++ + +G A
Sbjct: 505 -----FFKQMRENGI-MPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSA 558
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
LI+ Y C G ++DA L F+ + N +++
Sbjct: 559 LIDMYAKC-------------------------------GNMDDARLFFDTMMMKNIVAW 587
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N MI GYA G D + LFE M + E + + VT+ ++++G + L
Sbjct: 588 NEMIHGYAQNGLGDKAVELFEYM-------------LTTEQKPDAVTFIAVLTGCSHSGL 634
Query: 379 HEKALQLYMTM 389
+KA+ + +M
Sbjct: 635 VDKAMAFFNSM 645
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 166/395 (42%), Gaps = 71/395 (17%)
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
+N L+ G A L F L N SYN+ + G +D ++ L MP R+
Sbjct: 46 ANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNA 105
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
+S NT+IS + R+P +A+++Y MR + T T + +
Sbjct: 106 VSWNTVISA---LARSPGDGG-------------EAVEMYGRMRAEGLLPTHFTLASVLS 149
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
AC L +L G+ H VK ++N +V +L+ MY++CGS+ DA F ++ PN +
Sbjct: 150 ACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVS 209
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC----------------- 509
+TA+M G + G +A+ LF M + + + VL AC
Sbjct: 210 FTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLG 269
Query: 510 -------VRAGL-------------------VNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
VR G ++E +K+F S+ S +V + ++
Sbjct: 270 QAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVS----WNILITG 325
Query: 544 LGRSGHLHEAEE---FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP- 599
G+ G +A E +++ E + V + LL++C ++ +A+ MF +P
Sbjct: 326 FGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVH----SARAMFDKISRPS 381
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
++ + L + Y + +++ +R+ H V+ D
Sbjct: 382 VTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPD 416
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 204/671 (30%), Positives = 349/671 (52%), Gaps = 84/671 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T R+G L +A +F M R VS+N+++ G ++ + +L+L M+ K
Sbjct: 290 NALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQK 349
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T +++LS CA + +L +GKQ H +K+G V LL Y C +I+ A
Sbjct: 350 PDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEF 409
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F + Y Q + ++ +F +F +M + +V
Sbjct: 410 F---------------LCYGQLDNLNKSFQIFTQMQIEGIV------------------- 435
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
PN++T+ S+++ C LGA G+ +H ++K GF+F+ + LI+
Sbjct: 436 --------------PNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLID 481
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSIS 317
Y D A++++ RL+ + + ++I G + +A +F + + +++I
Sbjct: 482 MYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIG 541
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKM----------PHRSIISLNTMISVIPEM-------- 359
+ S I A +D +++ + +++SL + E
Sbjct: 542 FASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIY 601
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
++ V+WNS++SG+ Q+ E+AL ++ M K ++ TF A + + +++ G+
Sbjct: 602 AKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQ 661
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+H + KT ++S V +L+ +Y++CG+I+D +W +++ GYS HG
Sbjct: 662 IHGMIRKTGYDSETEVSNALITLYAKCGTIDDI-------------SWNSMITGYSQHGC 708
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYT 538
G EA+ LFE M + D++PN TFVGVLSAC GLV+EG+ FRSM +++ +VP EHY
Sbjct: 709 GFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYA 768
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
CVVDLLGRSG L A+ F+++MPI+ DA+VW LLSAC N+++GE AA + L+ K
Sbjct: 769 CVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPK 828
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
+ YV++SN+YAV GKW + R+ + VKK+PG SW+E+++ VHAF D+N+P
Sbjct: 829 DSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPR 888
Query: 659 CNVIYATLEHL 669
++IY L L
Sbjct: 889 ADMIYEYLRGL 899
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 146/583 (25%), Positives = 243/583 (41%), Gaps = 118/583 (20%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A N+FD+MPIR++ WN + + L M NV+ +E F+ +L
Sbjct: 111 GDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVL 170
Query: 92 SVCA-QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
C+ S +QIH + SG+E F+ + L+ Y + AK+VF+ L
Sbjct: 171 RGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENL----- 225
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+D V W +ISG +++ E+A+ LF +
Sbjct: 226 --------------------------KARDSVSWVAMISGLSQN-GYEEEAMLLFCQI-- 256
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
V+ AC ++ F GK +HGL++K GF + + AL+ Y
Sbjct: 257 -------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYS------ 297
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
G + AE IF+ +++ + +SYNS+I G A G
Sbjct: 298 -------------------------RSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGY 332
Query: 331 VDDSKRLFEKM------PH----RSIISLNTMISVIPE------------MERNPVTWNS 368
++ + LF+KM P S++S + +P M + V S
Sbjct: 333 INRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGS 392
Query: 369 MISGYVQ----NNLHE------------KALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
++ YV+ HE K+ Q++ M+ I + T+ + C+ LG
Sbjct: 393 LLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLG 452
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+ G+ +H ++KT F+ NVYV + L+DMY++ G ++ A F + +V +WTA++
Sbjct: 453 ATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIA 512
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
GY+ H +EA+ LF+ M +Q I + F +SAC +++G +I G
Sbjct: 513 GYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSD 572
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
L +V L R G + EA D D V W +L+S
Sbjct: 573 DLSIGNALVSLYARCGKVREAYAAF-DQIYAKDNVSWNSLVSG 614
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 179/424 (42%), Gaps = 67/424 (15%)
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS---MGRIEDAELIFNRLTE 312
G LI+FY + A+ V+D + L+ N + N I+ MGR+ +F R+
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPG---LFRRMLT 156
Query: 313 ANSISYNSMIKGYAVYGQVDD--SKRLFEKMPHRSIIS---------------------L 349
N + ++ I + G + S R E++ ++I S L
Sbjct: 157 KN-VEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFL 215
Query: 350 NTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
++ V ++ R+ V+W +MISG QN E+A+ L+ ++ AC
Sbjct: 216 SSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFC--------------QIVLSAC 261
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ + + G+ LH ++K F S YV +LV +YSR G+++ A+ F +S + ++
Sbjct: 262 TKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYN 321
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
+L++G + G + A+ LF+ M P+ T +LSAC G + G +
Sbjct: 322 SLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKA 381
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEF----------------IKDMPIE---LDAVVW 569
G+ + ++DL + + A EF M IE + +
Sbjct: 382 GMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTY 441
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV--ILSNIYAVLGKWGKKMDIRKRLT 627
++L C ++GE+ ++ + + YV +L ++YA GK + I +RL
Sbjct: 442 PSILKTCTTLGATDLGEQIHTQVLKTGFQ-FNVYVSSVLIDMYAKHGKLDHALKIFRRLK 500
Query: 628 HLEV 631
+V
Sbjct: 501 ENDV 504
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
Y G L+D Y G +N A F + +++ W + N + L LF ML +
Sbjct: 98 YDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTK 157
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGH 549
++ + F VL C + + + + + E T + +DL ++G
Sbjct: 158 NVEFDERIFAVVLRGCSGNAV---SFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGF 214
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSA 575
L A++ +++ D+V W A++S
Sbjct: 215 LSSAKKVFENLKAR-DSVSWVAMISG 239
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 216/674 (32%), Positives = 350/674 (51%), Gaps = 59/674 (8%)
Query: 21 TNKAITECGRNGQLVTARNLFDQM-PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N + G G + AR +FD+ R VSWN ++ Y K + +++ + M S
Sbjct: 138 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
++ E FS +++ C ++ G+Q+H +V++ GYE F + L+ Y ++ A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 257
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+F+ KMP DVV W LISG ++G +
Sbjct: 258 VIFE-------------------------------KMPDSDVVSWNALISGCV--LNGHD 284
Query: 200 -KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+A++L M+ SG +PN + S+++ACA GAF G+ +HG +IK + D+ IG
Sbjct: 285 HRAIELLLQMKSSGL-VPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVG 343
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----------N 308
L++ Y D AM+V+D + + L N+LI+G GR ++A IF N
Sbjct: 344 LVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVN 403
Query: 309 RLTEANSISYNSMIKGYAVYGQV----DDSKRLFEKMPHRSIIS-------LNTMISVIP 357
R T A + + ++ + QV + +F+ +I L+ I V
Sbjct: 404 RTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFE 463
Query: 358 EMERNPV-TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
E + SMI+ Q + E A++L+M M + ++ S L +AC+ L + +Q
Sbjct: 464 ECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 523
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +HAHL+K F S+ + G +LV Y++CGSI DA+ +FSS+ V +W+A++ G +
Sbjct: 524 GKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ 583
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLE 535
HG G A+ LF M+++ I PN T VL AC AGLV+E + F SMK +G+ T E
Sbjct: 584 HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEE 643
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
HY+C++DLLGR+G L +A E + MP + +A VWGALL A + E+G+ AA+K+F L
Sbjct: 644 HYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFIL 703
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN 655
+ + +V+L+N YA G W + +RK + +KK+P SW+E+ +VH F V D++
Sbjct: 704 EPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKS 763
Query: 656 NPNCNVIYATLEHL 669
+P IY+ L+ L
Sbjct: 764 HPMTKEIYSKLDEL 777
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/563 (23%), Positives = 239/563 (42%), Gaps = 62/563 (11%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVC-- 94
AR +FD++P VSW++++ YS ++ M V NE +L
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD 115
Query: 95 AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
AQL G Q+H + + +G+ FV + L+ Y +++A+RVFDE +
Sbjct: 116 AQL-----GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSE------ 164
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN 214
++ V W L+S Y K+ D C A+++F M SG
Sbjct: 165 ------------------------RNAVSWNGLMSAYVKN-DQCGDAIQVFGEMVWSGIQ 199
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P E+ F V+ AC G+ VH ++++ G+E D AL++ Y D A
Sbjct: 200 -PTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASV 258
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEA---NSISYNSMIKGYAVYGQ 330
+++++ + + + N+LI+G + G A EL+ + N +S++K A G
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGA 318
Query: 331 VDDSKRLFEKMPHRSIIS-----------------LNTMISVIPEM-ERNPVTWNSMISG 372
D +++ M + S L+ + V M R+ + WN++ISG
Sbjct: 319 FDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISG 378
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
H++A ++ +RK + R+T + + + + L + + +HA K F +
Sbjct: 379 CSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFD 438
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
+V L+D Y +C ++DA F SS ++ A T+++ S G A+ LF ML
Sbjct: 439 AHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLR 498
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ + P+ +L+AC +G ++ + + +V + G + +
Sbjct: 499 KGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIED 558
Query: 553 AEEFIKDMPIELDAVVWGALLSA 575
AE +P E V W A++
Sbjct: 559 AELAFSSLP-ERGVVSWSAMIGG 580
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 191/465 (41%), Gaps = 99/465 (21%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T S L+ A +L+ G +H +LKSG+ + + L+ FY+ C A+RVFDE+
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSGF--LASLRNHLISFYSKCRRPCCARRVFDEI 63
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ + WS ++ Y L P+ A++ F
Sbjct: 64 PDPCHVSWSSLVTAYSNNGL-----------PR---------------------SAIQAF 91
Query: 206 RWMRESGENMPNEYTFDSVIRAC--ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
MR G NE+ V++ A+LGA VH + + GF D + AL+ Y
Sbjct: 92 HGMRAEGV-CCNEFALPVVLKCVPDAQLGA-----QVHAMAMATGFGSDVFVANALVAMY 145
Query: 264 CGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRLT----------- 311
G D A RV+D + S N L++ + + DA +F +
Sbjct: 146 GGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGF 205
Query: 312 ----------------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
E + + N+++ Y G+VD + +FEKMP
Sbjct: 206 SCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPD 265
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
++S WN++ISG V N +A++L + M+ + S
Sbjct: 266 SDVVS-----------------WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSS 308
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ AC+ G+ G+ +H ++K +S+ Y+G LVDMY++ ++DA F +S +
Sbjct: 309 ILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRD 368
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+ W AL++G SH G EA +F + ++ + N T VL +
Sbjct: 369 LILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 413
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/566 (21%), Positives = 226/566 (39%), Gaps = 104/566 (18%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M E + + N + + G++ A +F++MP VVSWN ++ G ++ L
Sbjct: 231 MGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIEL 290
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ M S + N S+IL CA + G+QIH ++K+ + +++G GL+ YA
Sbjct: 291 LLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+++A +VFD + + +LW+ ++ G +AF +F + K+ + V
Sbjct: 351 NHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGV-------- 402
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
N T +V+++ A L A + VH L K GF F
Sbjct: 403 -------------------------NRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 437
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF---- 307
D + LI+ Y C A+RV++ + + A S+I L E A +F
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEML 497
Query: 308 -----------------------------------NRLTEANSISYNSMIKGYAVYGQVD 332
R +++ + N+++ YA G ++
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 557
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
D++ F +P R ++S W++MI G Q+ ++AL+L+ M
Sbjct: 558 DAELAFSSLPERGVVS-----------------WSAMIGGLAQHGHGKRALELFGRMVDE 600
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSIND 451
I+ T + + AC+ G + + + + + + + ++D+ R G ++D
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660
Query: 452 AQASFSSIS-SPNVAAWTALMNGYSHH------GLGSEAVLLFEIMLEQDIVPNAATFVG 504
A +S+ N + W AL+ H L +E + + E + T V
Sbjct: 661 AMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILE-------PEKSGTHVL 713
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGV 530
+ + +G+ NE K+ + MK +
Sbjct: 714 LANTYASSGMWNEVAKVRKLMKDSNI 739
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 9/199 (4%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
R+ T S + +L G LHA+L+K+ F +++ L+ YS+C A+
Sbjct: 2 RSAGTISQQLTRYAAAQALLPGAHLHANLLKSGFLASLR--NHLISFYSKCRRPCCARRV 59
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F I P +W++L+ YS++GL A+ F M + + N VL A L
Sbjct: 60 FDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQL- 118
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G ++ + G + +V + G G + +A + E +AV W L+SA
Sbjct: 119 --GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 176
Query: 576 CWFWMNMEVGERAAQKMFG 594
+ N + G+ A ++FG
Sbjct: 177 --YVKNDQCGD--AIQVFG 191
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 212/671 (31%), Positives = 343/671 (51%), Gaps = 53/671 (7%)
Query: 4 YATQSQTLMTQETL--IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
YA ++ L + L S N ++ + G + + FDQ+P R VSW TM+ GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
++ +++ ++ M + ++ + T + +L+ A + GK++H ++K G V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+ LL YA C + AK VFD + + W+ M+ ++Q M A F +M ++D+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 182 VVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
V W +ISG+ + G + +AL +F M P+ +T SV+ ACA L C GK +
Sbjct: 244 VTWNSMISGFNQR--GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
H ++ GF+ + ALI Y C + A R+ ++ L +I
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL--------------KI 347
Query: 301 EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
E + +++ GY G ++ +K +F +SL +
Sbjct: 348 E---------------GFTALLDGYIKLGDMNQAKNIF--------VSLK---------D 375
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
R+ V W +MI GY Q+ + +A+ L+ +M T + + S L SL G+ +
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGL 479
H VK+ +V V +L+ MY++ G+I A +F I + +WT+++ + HG
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG-VVPTLEHYT 538
EA+ LFE ML + + P+ T+VGV SAC AGLVN+G + F MK ++PTL HY
Sbjct: 496 AEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYA 555
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
C+VDL GR+G L EA+EFI+ MPIE D V WG+LLSAC N+++G+ AA+++ L+ +
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPE 615
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
AY L+N+Y+ GKW + IRK + VKK+ G SWIE+ +VH F VED +P
Sbjct: 616 NSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPE 675
Query: 659 CNVIYATLEHL 669
N IY T++ +
Sbjct: 676 KNEIYMTMKKI 686
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 126/531 (23%), Positives = 229/531 (43%), Gaps = 90/531 (16%)
Query: 86 TFSTILSVCAQL--------NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ ST+L +C L N + +HC V+KSG ++ + L+ Y+
Sbjct: 8 SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALH 67
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+++FDE+ W+ +L Y + M + F ++P++D V WT +I GY K++
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGY-KNIGQ 126
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
KA+++ M + G P ++T +V+ + A GK VH ++K G + S+
Sbjct: 127 YHKAIRVMGDMVKEGIE-PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSN 185
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
+L+ Y C A V+DR+ +++ N++I + +G+++ A F ++ E + ++
Sbjct: 186 SLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVT 245
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+NSMI G+ G + +F KM S++S P+
Sbjct: 246 WNSMISGFNQRGYDLRALDIFSKMLRDSLLS--------PD------------------- 278
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
R T + + AC+ L L G+ +H+H+V T F+ + V
Sbjct: 279 --------------------RFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLN 318
Query: 438 SLVDMYSRCGSI---------------------------------NDAQASFSSISSPNV 464
+L+ MYSRCG + N A+ F S+ +V
Sbjct: 319 ALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDV 378
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
AWTA++ GY HG EA+ LF M+ PN+ T +LS ++ G +I S
Sbjct: 379 VAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGS 438
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + ++ ++ + ++G++ A + E D V W +++ A
Sbjct: 439 AVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIA 489
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 197/646 (30%), Positives = 323/646 (50%), Gaps = 51/646 (7%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N ++ ++G+L AR +F +MP R VSW M+ G ++ +F E++ + M
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T + +LS CA + G+++H V+K G V + +L Y C + E A V
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 221
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-K 200
F+ + + W+ M+ M A +F MP + +V W +I+GY + +G + K
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQ--NGLDAK 279
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
ALKLF M P+E+T SV+ ACA LG GK VH +++ ++ + ALI
Sbjct: 280 ALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALI 339
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNS 320
Y + + A R+ D+ SM T+ N IS+ +
Sbjct: 340 STYAKSGSVENARRIMDQ-----------------SME------------TDLNVISFTA 370
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
+++GY G ++ ++ +F M +R + V W +MI GY QN ++
Sbjct: 371 LLEGYVKIGDMESAREMFGVMNNRDV-----------------VAWTAMIVGYEQNGRND 413
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+A+ L+ +M + T + + C+ L L G+ +H +++ E + V +++
Sbjct: 414 EAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAII 473
Query: 441 DMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
MY+R GS A+ F + WT+++ + HG G EAV LFE ML + P+
Sbjct: 474 TMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDR 533
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
T+VGVLSAC AG VNEG + + +K+ + + P + HY C+VDLL R+G EA+EFI+
Sbjct: 534 ITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIR 593
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
MP+E DA+ WG+LLSAC N E+ E AA+K+ +D AY ++N+Y+ G+W
Sbjct: 594 RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSD 653
Query: 619 KMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
I K V+K+ G SW + S++H F +D +P + +YA
Sbjct: 654 AARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYA 699
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 237/502 (47%), Gaps = 36/502 (7%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE----IEEAKRVF 142
++ +L +C + G+ IH +K+G ++ + LL +Y + +A+R+F
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 143 DE--LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
DE L N W+ +L + + ++DA VF +MP++D V WT ++ G ++ E
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGE- 147
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
A+K M G P ++T +V+ +CA A G+ VH ++K G + +++
Sbjct: 148 AIKTLLDMTADGFT-PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVL 206
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNS 320
Y C + A V++R+ +++ N++++ +GR++ AE +F + + + +S+N+
Sbjct: 207 NMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNA 266
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ--NNL 378
MI GY G + +LF +M H S M + T S++S N
Sbjct: 267 MIAGYNQNGLDAKALKLFSRMLHES------------SMAPDEFTITSVLSACANLGNVR 314
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
K + Y+ ++A + + + +A S GS++ + + ++T NV T+
Sbjct: 315 IGKQVHAYILRTEMAYNSQVTNALISTYAKS--GSVENARRIMDQSMETDL--NVISFTA 370
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L++ Y + G + A+ F +++ +V AWTA++ GY +G EA+ LF M+ PN
Sbjct: 371 LLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPN 430
Query: 499 AATFVGVLSACVRAGLVNEGMKIF-RSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEA 553
+ T VLS C ++ G +I R+++S LE + V + + RSG A
Sbjct: 431 SYTLAAVLSVCASLACLDYGKQIHCRAIRSL-----LEQSSSVSNAIITMYARSGSFPWA 485
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
+ + + W +++ A
Sbjct: 486 RRMFDQVCWRKETITWTSMIVA 507
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
NV+ SL+ M+++ G + DA+ F+ + + +WT ++ G + G EA+ M
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 492 EQDIVPNAATFVGVLSAC--VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
P T VLS+C +AG V G K+ + G+ + V+++ G+ G
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAV--GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 214
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
A + MP+ W A++S M++ E + M D+ +S +++
Sbjct: 215 SETATTVFERMPVR-SVSSWNAMVSLNTHLGRMDLAESLFESM--PDRSIVSWNAMIAG- 270
Query: 610 YAVLGKWGKKMDIRKRLTH 628
Y G K + + R+ H
Sbjct: 271 YNQNGLDAKALKLFSRMLH 289
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 196/639 (30%), Positives = 320/639 (50%), Gaps = 51/639 (7%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
++G+L AR +F +MP R VSW M+ G ++ +F E++ + M + T +
Sbjct: 3 AKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLT 62
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+LS CA + G+++H V+K G V + +L Y C + E A VF+ +
Sbjct: 63 NVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVR 122
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRW 207
+ W+ M+ M A +F MP + +V W +I+GY + +G + KALKLF
Sbjct: 123 SVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQ--NGLDAKALKLFSR 180
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M P+E+T SV+ ACA LG GK VH +++ ++ + ALI Y
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAV 327
+ + A R+ D+ SM T+ N IS+ ++++GY
Sbjct: 241 SVENARRIMDQ-----------------SME------------TDLNVISFTALLEGYVK 271
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G ++ ++ +F M +R + V W +MI GY QN +++A+ L+
Sbjct: 272 IGDMESAREMFGVMNNRDV-----------------VAWTAMIVGYEQNGRNDEAIDLFR 314
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
+M + T + + C+ L L G+ +H +++ E + V +++ MY+R G
Sbjct: 315 SMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSG 374
Query: 448 SINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
S A+ F + WT+++ + HG G EAV LFE ML + P+ T+VGVL
Sbjct: 375 SFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVL 434
Query: 507 SACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
SAC AG VNEG + + +K+ + + P + HY C+VDLL R+G EA+EFI+ MP+E D
Sbjct: 435 SACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPD 494
Query: 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKR 625
A+ WG+LLSAC N E+ E AA+K+ +D AY ++N+Y+ G+W I K
Sbjct: 495 AIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKA 554
Query: 626 LTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
V+K+ G SW + S++H F +D +P + +YA
Sbjct: 555 RKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYA 593
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 219/474 (46%), Gaps = 65/474 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTV-------------------------------V 50
N + G+ G TA +F++MP+R+V V
Sbjct: 97 NSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIV 156
Query: 51 SWNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCL 109
SWN M+ GY++ ++L L S M H S++ +E T +++LS CA L ++ GKQ+H
Sbjct: 157 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY 216
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED--NELLWSLMLVGYVQCNLMS 167
+L++ V + L+ YA +E A+R+ D+ E N + ++ +L GYV+ M
Sbjct: 217 ILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 276
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
A ++F M +DVV WT +I GY ++ ++A+ LFR M G PN YT +V+
Sbjct: 277 SAREMFGVMNNRDVVAWTAMIVGYEQNGRN-DEAIDLFRSMITCGPE-PNSYTLAAVLSV 334
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
CA L GK +H I+ E S+ A+I Y +F A R++D++ C
Sbjct: 335 CASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQV---CWRKE 391
Query: 288 ----NSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFE 339
S+I L G+ E+A +F + E + I+Y ++ + G V++ KR ++
Sbjct: 392 TITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYD 451
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
++ + I+ PEM + M+ + L +A + +R++ ++
Sbjct: 452 QIKNEHQIA--------PEMSH----YACMVDLLARAGLFSEAQEF---IRRMPVEPDAI 496
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGSINDA 452
+ L AC + + +L L+ P S Y +++ ++YS CG +DA
Sbjct: 497 AWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAY--SAIANVYSACGRWSDA 548
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 200/423 (47%), Gaps = 30/423 (7%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
+ + ++DA VF +MP++D V WT ++ G ++ E A+K M G P ++
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGE-AIKTLLDMTADGFT-PTQF 59
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T +V+ +CA A G+ VH ++K G + +++ Y C + A V++R+
Sbjct: 60 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFE 339
+++ N++++ +GR++ AE +F + + + +S+N+MI GY G + +LF
Sbjct: 120 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ--NNLHEKALQLYMTMRKLAIDRT 397
+M H S M + T S++S N K + Y+ ++A +
Sbjct: 180 RMLHES------------SMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQ 227
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
+ + +A S GS++ + + ++T NV T+L++ Y + G + A+ F
Sbjct: 228 VTNALISTYAKS--GSVENARRIMDQSMETDL--NVISFTALLEGYVKIGDMESAREMFG 283
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
+++ +V AWTA++ GY +G EA+ LF M+ PN+ T VLS C ++
Sbjct: 284 VMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDY 343
Query: 518 GMKIF-RSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
G +I R+++S LE + V + + RSG A + + + W ++
Sbjct: 344 GKQIHCRAIRSL-----LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSM 398
Query: 573 LSA 575
+ A
Sbjct: 399 IVA 401
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 84/189 (44%), Gaps = 44/189 (23%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDE 67
++L+ Q + + +N IT R+G AR +FDQ+ R ++W +M+ ++ + +E
Sbjct: 353 RSLLEQSSSV--SNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 410
Query: 68 SLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLF 127
++ L M R+ V+ + T+ +LS C+ +G+
Sbjct: 411 AVGLFEEMLRAGVEPDRITYVGVLSACSH----------------AGF------------ 442
Query: 128 FYANCFEIEEAKRVFDELHEDNELL-----WSLMLVGYVQCNLMSDAFDVFIKMP-KKDV 181
+ E KR +D++ ++++ ++ M+ + L S+A + +MP + D
Sbjct: 443 -------VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDA 495
Query: 182 VVWTKLISG 190
+ W L+S
Sbjct: 496 IAWGSLLSA 504
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 8/189 (4%)
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
M+++ G + DA+ F+ + + +WT ++ G + G EA+ M P T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 502 FVGVLSAC--VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
VLS+C +AG V G K+ + G+ + V+++ G+ G A +
Sbjct: 61 LTNVLSSCAVTQAGAV--GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFER 118
Query: 560 MPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKK 619
MP+ W A++S M++ E + M D+ +S +++ Y G K
Sbjct: 119 MPVR-SVSSWNAMVSLNTHLGRMDLAESLFESM--PDRSIVSWNAMIAG-YNQNGLDAKA 174
Query: 620 MDIRKRLTH 628
+ + R+ H
Sbjct: 175 LKLFSRMLH 183
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 197/646 (30%), Positives = 323/646 (50%), Gaps = 51/646 (7%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N ++ ++G+L AR +F +MP R VSW M+ G ++ +F E++ + M
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T + +LS CA + G+++H V+K G V + +L Y C + E A V
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTV 221
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-K 200
F+ + + W+ M+ M A +F MP + +V W +I+GY + +G + K
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQ--NGLDAK 279
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
ALKLF M P+E+T SV+ ACA LG GK VH +++ ++ + ALI
Sbjct: 280 ALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALI 339
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNS 320
Y + + A R+ D+ SM T+ N IS+ +
Sbjct: 340 STYAKSGSVENARRIMDQ-----------------SME------------TDLNVISFTA 370
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
+++GY G ++ ++ +F M +R + V W +MI GY QN ++
Sbjct: 371 LLEGYVKIGDMESAREMFGVMNNRDV-----------------VAWTAMIVGYEQNGRND 413
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+A+ L+ +M + T + + C+ L L G+ +H +++ E + V +++
Sbjct: 414 EAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAII 473
Query: 441 DMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
MY+R GS A+ F + WT+++ + HG G EAV LFE ML + P+
Sbjct: 474 TMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDR 533
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
T+VGVLSAC AG VNEG + + +K+ + + P + HY C+VDLL R+G EA+EFI+
Sbjct: 534 ITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIR 593
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
MP+E DA+ WG+LLSAC N E+ E AA+K+ +D AY ++N+Y+ G+W
Sbjct: 594 RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSD 653
Query: 619 KMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
I K V+K+ G SW + S++H F +D +P + +YA
Sbjct: 654 AARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYA 699
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 236/502 (47%), Gaps = 36/502 (7%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE----IEEAKRVF 142
++ +L +C + G+ IH +K+G ++ + LL +Y + +A+R+F
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 143 DE--LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
DE L N W+ +L + + ++DA VF +MP++D V WT ++ G ++ E
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGE- 147
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
A+K M G P ++T +V+ +CA A G+ VH ++K G + +++
Sbjct: 148 AIKTLLDMTADGFT-PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVL 206
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNS 320
Y C + A V++R+ +++ N++++ +GR++ AE +F + + +S+N+
Sbjct: 207 NMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNA 266
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ--NNL 378
MI GY G + +LF +M H S M + T S++S N
Sbjct: 267 MIAGYNQNGLDAKALKLFSRMLHES------------SMAPDEFTITSVLSACANLGNVR 314
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
K + Y+ ++A + + + +A S GS++ + + ++T NV T+
Sbjct: 315 IGKQVHAYILRTEMAYNSQVTNALISTYAKS--GSVENARRIMDQSMETDL--NVISFTA 370
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L++ Y + G + A+ F +++ +V AWTA++ GY +G EA+ LF M+ PN
Sbjct: 371 LLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPN 430
Query: 499 AATFVGVLSACVRAGLVNEGMKIF-RSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEA 553
+ T VLS C ++ G +I R+++S LE + V + + RSG A
Sbjct: 431 SYTLAAVLSVCASLACLDYGKQIHCRAIRSL-----LERSSSVSNAIITMYARSGSFPWA 485
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
+ + + W +++ A
Sbjct: 486 RRMFDQVCWRKETITWTSMIVA 507
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 5/165 (3%)
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
NV+ SL+ M+++ G + DA+ F+ + + +WT ++ G + G EA+ M
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 492 EQDIVPNAATFVGVLSAC--VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
P T VLS+C +AG V G K+ + G+ + V+++ G+ G
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAV--GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 214
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
A + MP+ W A++S M++ E + M G
Sbjct: 215 AETASTVFERMPVR-SVSSWNAMVSLNTHLGRMDLAESLFESMPG 258
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 221/690 (32%), Positives = 344/690 (49%), Gaps = 117/690 (16%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N I +G+L AR LF + PIR+ ++W++++ GY ++ E+L L M
Sbjct: 74 SWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEG 133
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ N+ T+ ++L VC+ L GKQIH +K+ ++ FV +GL+ YA C I EA+
Sbjct: 134 ERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAE 193
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+F EL D K++ V+WT +++GY+++ DG
Sbjct: 194 YLF-ELAPD-----------------------------KRNHVLWTAMVTGYSQNGDG-H 222
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
KA++ FR MR G N++TF S++ AC + A G VHG +++ GF + +G AL
Sbjct: 223 KAIECFRDMRGEGIEC-NQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSAL 281
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA---------------- 303
++ Y C A R+ + +E + NS+I G + G E+A
Sbjct: 282 VDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDE 341
Query: 304 -----------------------ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
LI EA + N+++ YA G D + +FEK
Sbjct: 342 FTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEK 401
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
M + +IS W S+++G V N +E+AL+L+ MR + I +
Sbjct: 402 MTDKDVIS-----------------WTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIV 444
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ + AC+ L L+ G+ +HA+ +K+ S++ V SLV MY++CG I DA F S+
Sbjct: 445 IAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSME 504
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+V WTAL+ GY+ +G G + AGLV G
Sbjct: 505 IQDVITWTALIVGYAQNGRGRD----------------------------HAGLVEHGRS 536
Query: 521 IFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
F+SM+ YG+ P EHY C++DLLGRSG L EA+E + M ++ DA VW ALL+AC
Sbjct: 537 YFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVH 596
Query: 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSW 639
N+E+GERAA +F L+ K YV+LSN+Y+ GKW + R+ + V K+PGCSW
Sbjct: 597 GNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSW 656
Query: 640 IELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
IE++S+VH F EDR++P IY+ ++ +
Sbjct: 657 IEMSSKVHRFMSEDRSHPRTAEIYSKVDEI 686
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 163/369 (44%), Gaps = 63/369 (17%)
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
C D A +++D + + + N++I + GR+ +A +F + I+++S+I GY
Sbjct: 54 CGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGY 113
Query: 326 AVYGQVDDSKRLFEKMPHR----------------------------------------- 344
YG ++ LF +M +
Sbjct: 114 CRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNA 173
Query: 345 ----SIISLNTMISVIPEME---------RNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
++ + I E E RN V W +M++GY QN KA++ + MR
Sbjct: 174 FVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRG 233
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
I+ + TF + AC + + G +H +V++ F +NV+VG++LVDMYS+CG +++
Sbjct: 234 EGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSN 293
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A+ ++ + +W +++ G GLG EA+ LF IM + + + T+ VL+ C
Sbjct: 294 ARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLN-CFS 352
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAV 567
+ M+ S+ S V E Y V VD+ + G+ A + + M + D +
Sbjct: 353 FVM---DMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKM-TDKDVI 408
Query: 568 VWGALLSAC 576
W +L++ C
Sbjct: 409 SWTSLVTGC 417
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 205/632 (32%), Positives = 324/632 (51%), Gaps = 85/632 (13%)
Query: 41 FDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSL 100
F+ M R VVSWN M+ S+ + E+L LV MHR V+L+ TT+++ L+ CA+L SL
Sbjct: 217 FEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSL 276
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
GKQ+H V++S + +V S L+ YA C +EAKRVF+ L +
Sbjct: 277 GWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQD------------- 323
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP-NEY 219
++ V WT LI G + + K+++LF MR E M +++
Sbjct: 324 ------------------RNSVSWTVLIGG-SLQYECFSKSVELFNQMR--AELMAIDQF 362
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
++I C C G+ +H L +K G
Sbjct: 363 ALATLISGCFNRMDLCLGRQLHSLCLKSG------------------------------- 391
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFE 339
N + SNSLI+ G +++AE +F+ ++E + +S+ SMI Y+ G + ++ F+
Sbjct: 392 HNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFD 451
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTR 398
M RN +TWN+M+ Y+Q+ E L++Y M + +
Sbjct: 452 GMA-----------------TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDW 494
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
T+ LF C+ +G+ + G + H VK NV V + + MYS+CG I++AQ F
Sbjct: 495 VTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDL 554
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
++ +V +W A++ GYS HG+G +A F+ ML + P+ ++V VLS C +GLV EG
Sbjct: 555 LNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEG 614
Query: 519 MKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
F M + +G+ P LEH++C+VDLLGR+GHL EA++ I MP++ A VWGALLSAC
Sbjct: 615 KLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACK 674
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
N E+ E AA+ +F LD +Y++L+ IY+ GK +RK + +KK+PG
Sbjct: 675 IHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGY 734
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
SW+E+ ++VH F +D ++P I ++ L
Sbjct: 735 SWMEVENKVHVFKADDVSHPQVIAIRNKMDEL 766
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 208/486 (42%), Gaps = 77/486 (15%)
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD-ELHEDN 149
L C +L + +H ++ G F+ + LL Y +C + +A+R+ ++ E N
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ ++M+ GY + +SDA ++F +MP++DV W L+S ++ WM
Sbjct: 87 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGS---------WM- 136
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+C LG + GL K F D + AL++ + C
Sbjct: 137 -----------------SCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 179
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
D A R++ ++E P IF R NSM+ GYA
Sbjct: 180 DFASRLFSQIERPT----------------------IFCR---------NSMLAGYAKLY 208
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
+D + FE M ER+ V+WN MI+ Q+ +AL L + M
Sbjct: 209 GIDHAIEYFEDMA-----------------ERDVVSWNMMIAALSQSGRVREALGLVVEM 251
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+ + +T++ AC+ L SL G+ LHA ++++ + + YV ++L+++Y++CGS
Sbjct: 252 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 311
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+A+ F+S+ N +WT L+ G + S++V LF M + + + ++S C
Sbjct: 312 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371
Query: 510 VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
+ G ++ G + ++ L + G L AE M E D V W
Sbjct: 372 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS-ERDIVSW 430
Query: 570 GALLSA 575
++++A
Sbjct: 431 TSMITA 436
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 202/473 (42%), Gaps = 56/473 (11%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G A+ +F+ + R VSW ++ G ++ F +S+ L + M + +++ +T++
Sbjct: 309 GSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLI 368
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S C L G+Q+H L LKSG+ V + L+ YA C +++ A+ VF + E + +
Sbjct: 369 SGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIV 428
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ Y Q + A + F M ++ + W ++ Y + E LK++ M
Sbjct: 429 SWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQH-GAEEDGLKMYSAMLSQ 487
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+ P+ T+ ++ R CA +GA G + G +K G + S+ A I Y C
Sbjct: 488 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKC----- 542
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
GRI +A+ +F+ L + +S+N+MI GY+ +G
Sbjct: 543 --------------------------GRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMG 576
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL-HEKALQLYMTMR 390
+ + F+ M + + + +++ +++SG + L E L M R
Sbjct: 577 KQAAKTFDDMLSKG-------------AKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTR 623
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
I FS + G L + + L + K P + V +L+ G N
Sbjct: 624 VHGISPGLEHFSCMVDLLGRAGHLTEAKDL---IDKMPMKPTAEVWGALLSACKIHG--N 678
Query: 451 DAQASFSS-----ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
D A ++ + SP+ ++ L YS G ++ + ++M ++ I N
Sbjct: 679 DELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKN 731
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 138/343 (40%), Gaps = 49/343 (14%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E IVS IT + G ++ AR FD M R ++WN ML Y + ++ L + S
Sbjct: 424 ERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSA 483
Query: 75 M-HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M + +V + T+ T+ CA + + G QI +K+G V + + Y+ C
Sbjct: 484 MLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCG 543
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
I EA+++FD L+ + + W+ M+ GY Q + A F M K
Sbjct: 544 RISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGA------------ 591
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
P+ ++ +V+ C+ G EGK+ ++ +
Sbjct: 592 ---------------------KPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRV-----H 625
Query: 254 SIGGALIEFYCGCEAFDGA---MRVYDRLENPCLNASNSLINGLISMGRI----EDAELI 306
I L F C + A D ++ + + + L+S +I E AEL
Sbjct: 626 GISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELA 685
Query: 307 FNRLTE---ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
+ E +S SY + K Y+ G+ DDS ++ + M + I
Sbjct: 686 AKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGI 728
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 196/635 (30%), Positives = 331/635 (52%), Gaps = 55/635 (8%)
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
+C + + K++HCL++KS F+ + L+ Y+ I A+ VFD++ + N
Sbjct: 14 LCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFS 73
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
W+ ML Y + +S ++F MP +D V W LISGY +A+K + M + G
Sbjct: 74 WNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYV-CYGSVVEAVKTYNSMMKDG 132
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
N TF +++ + G G+ +HG ++K GF +G +L++ Y A
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD 332
+V+D ++ + N++I GL+ G ++D++ +F+ + E +SIS+ +MI G G
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252
Query: 333 DSKRLFEKMPHRSII-----------------------SLNTMI------------SVIP 357
++ LF M + ++T+I S +
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312
Query: 358 EM------------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+M +N V+W +M+ GY QN E+A++++ M++ I+
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDF 372
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T + +C+ L SL++G H + + S + V +L+ +Y +CGSI D+ F +
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
S + +WTAL++GY+ G +E + LFE ML Q + P+A TF+ VLSAC RAGLV G
Sbjct: 433 SFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQ 492
Query: 520 KIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
+ F SM K +G++P +HYTC++DL GR+G L EA+ FI MP D++ W LLS+C
Sbjct: 493 QYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRL 552
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
+ N E+G+ AA+ + LD + + Y++LS+IYA GKW +R+ + +K+PG S
Sbjct: 553 YGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFS 612
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
WI+ S+V+ FS +D+++P + IYA LE L +
Sbjct: 613 WIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKM 647
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 149/542 (27%), Positives = 270/542 (49%), Gaps = 42/542 (7%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N ++ ++G L T + +F MP R VSWN+++ GY + E++ ++M +
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 80 V-KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
V LN TFST+L + + + G+QIH ++K G+ + FVGS L+ YA + A
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+VFDE+ E N ++++ M+ G ++ ++ D+ +F M ++D + WT +I+G + +G
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQ--NGL 250
Query: 199 E-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E +A+ LFR MR+ G M ++YTF SV+ AC L A EGK +H L+I+ G+ + +G
Sbjct: 251 EAEAMDLFRDMRQEGMAM-DQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGS 309
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EA 313
AL++ YC C + A V+ R+ N + + +++ G G E+A +F + E
Sbjct: 310 ALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEP 369
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL----NTMIS-------------VI 356
+ + S+I A +++ + + +IS N +I+ +
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLF 429
Query: 357 PEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
EM R+ V+W +++SGY Q + + L+ M + TF + ACS G ++
Sbjct: 430 DEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVE 489
Query: 416 QGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTAL 470
+GQ ++K PF + T ++D++ R G + +A+ + + SP+ W L
Sbjct: 490 RGQQYFESMLKDHGIIPFSDHY---TCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATL 546
Query: 471 MNG---YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
++ Y + +G A E +LE D N A ++ + S G + ++ R M+
Sbjct: 547 LSSCRLYGNEEIGKWAA---ESLLELD-PQNPAGYILLSSIYAAKGKWSNVAQLRRGMRE 602
Query: 528 YG 529
G
Sbjct: 603 KG 604
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
+ I +N IT G+ G + + LFD+M R VSW ++ GY+++ K +E++ L M
Sbjct: 404 SFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERM 463
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS-GYECFEFVGSGLLFFYANCFE 134
+K + TF +LS C++ + G+Q +LK G F + ++ +
Sbjct: 464 LVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGR 523
Query: 135 IEEAKRVFDEL-HEDNELLWSLMLVGYVQCNLMSD------AFDVFIKMPKKDVVVWTKL 187
+EEAK +++ + + W+ +L C L + A + +++ ++ + L
Sbjct: 524 LEEAKNFINKMPFSPDSIGWATLL---SSCRLYGNEEIGKWAAESLLELDPQNPAGYILL 580
Query: 188 ISGYAKSVDGCEKALKLFRWMRESG 212
S YA A +L R MRE G
Sbjct: 581 SSIYAAKGKWSNVA-QLRRGMREKG 604
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 219/749 (29%), Positives = 355/749 (47%), Gaps = 95/749 (12%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N +T G + TA LFD MP VVSWN ++ GY + F ES+ L M R
Sbjct: 84 VSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARR 143
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG-------------- 124
V + TTF+ +L C+ L L G Q+H L +K+G E GS
Sbjct: 144 GVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDA 203
Query: 125 LLFFY--------------ANCFEIEEAKRVFD--------------------------- 143
L FFY A C + E+ R +
Sbjct: 204 LCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAM 263
Query: 144 -------ELH--------EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
+LH + ++ + ++ Y + N ++DA F +P V ++
Sbjct: 264 SCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMM 323
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
G ++ G E A+ LF++M S + + V ACA + +G+ VH L IK G
Sbjct: 324 VGLVRAGLGIE-AMGLFQFMIRSSIRF-DVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
F+ D + A+++ Y C+A A ++ ++ + N++I L G +D L FN
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441
Query: 309 RL----TEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
+ + + +Y S++K G V+ +V S + +++ +
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 501
Query: 355 VIPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
+I E ++ V+WN+++SG+ N E+A + + M + + TF+ +
Sbjct: 502 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 561
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
C+ L +++ G+ +H ++K + Y+ ++LVDMY++CG + D+ F + + +
Sbjct: 562 TCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS 621
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
W A++ GY+ HGLG EA+ +FE M ++++VPN ATFV VL AC GL ++G + F M
Sbjct: 622 WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMT 681
Query: 527 S-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
+ Y + P LEH+ C+VD+LGRS EA +FI MP + DAV+W LLS C ++E+
Sbjct: 682 THYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIA 741
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
E AA + LD S Y++LSN+YA GKW R+ L +KK+PGCSWIE+ S
Sbjct: 742 ELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSE 801
Query: 646 VHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+H F V D+ +P +Y L L +
Sbjct: 802 MHGFLVGDKAHPRSGELYEMLNDLIGEMK 830
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 243/552 (44%), Gaps = 69/552 (12%)
Query: 85 TTFSTILSVCAQLN--SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
TFS + CAQ +L G+ H ++ SG+ FV + LL YA C A+RVF
Sbjct: 16 VTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAACARRVF 75
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
D + + + W+ ML Y +S A +F MP DVV W L+SGY + ++++
Sbjct: 76 DAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQR-GMFQESV 134
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
LF M G + P+ TF ++++C+ L G VH L +K G E D G AL++
Sbjct: 135 DLFVEMARRGVS-PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDM 193
Query: 263 YCGCEAFDGAMRVYDRLEN-----------PCLNASNSLINGL----------------- 294
Y C + D A+ + + C+ + + GL
Sbjct: 194 YGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQ-NEQYVRGLELFIEMQRLGLGVSQPS 252
Query: 295 -------------ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
++ GR A I N+ + ++ + +++ YA + D++R F +
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFS-SDRVVGTAIVDVYAKANSLTDARRAFFGL 311
Query: 342 PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
P+ ++ T N+M+ G V+ L +A+ L+ M + +I +
Sbjct: 312 PNHTV-----------------ETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 354
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
S +F AC+ QGQ +H +K+ F+ ++ V +++D+Y +C ++ +A F +
Sbjct: 355 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 414
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+ +W A++ +G + +L F ML + P+ T+ VL AC + G+ +
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMN 581
+ G+ + VVD+ + G + EA++ + D V W A+LS F +N
Sbjct: 475 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQK-LHDRIGGQQVVSWNAILSG--FSLN 531
Query: 582 MEVGERAAQKMF 593
E E AQK F
Sbjct: 532 KESEE--AQKFF 541
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 185/415 (44%), Gaps = 56/415 (13%)
Query: 216 PNEYTFDSVIRACARLG--AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P TF V ++CA+ G A G+ H ++ GF + + L++ Y C A
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAACAR 72
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
RV+D + + N+++ G I A +F+ + + + +S+N+++ GY G +
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 334 SKRLFEKMPHRSIISLNTMISVIPE----------------------MERNPVTWNSMIS 371
S LF +M R + T +V+ + +E + T ++++
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192
Query: 372 GY-------------------------------VQNNLHEKALQLYMTMRKLAIDRTRST 400
Y VQN + + L+L++ M++L + ++ +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
++ F +C+ + L G+ LHAH +K F S+ VGT++VD+Y++ S+ DA+ +F +
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ V A+M G GLG EA+ LF+ M+ I + + GV SAC +G +
Sbjct: 313 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 372
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G + V+DL G+ L EA + M + D+V W A+++A
Sbjct: 373 VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 426
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 397 TRSTFSVLFHACSCLG--SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
R TFS +F +C+ G +L G+ HA +V + F N +V L+ MY+RC A+
Sbjct: 14 ARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAACARR 73
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV------------------ 496
F ++ + +W ++ YSH G S AV LF+ M + D+V
Sbjct: 74 VFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQES 133
Query: 497 -------------PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
P+ TF +L +C ++ G+++ G+ + + +VD+
Sbjct: 134 VDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDM 193
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
G+ L +A F MP E + V WGA ++ C
Sbjct: 194 YGKCRSLDDALCFFYGMP-ERNWVSWGAAIAGC 225
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 219/749 (29%), Positives = 355/749 (47%), Gaps = 95/749 (12%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N +T G + TA LFD MP VVSWN ++ GY + F ES+ L M R
Sbjct: 84 VSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARR 143
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG-------------- 124
V + TTF+ +L C+ L L G Q+H L +K+G E GS
Sbjct: 144 GVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDA 203
Query: 125 LLFFY--------------ANCFEIEEAKRVFD--------------------------- 143
L FFY A C + E+ R +
Sbjct: 204 LCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAM 263
Query: 144 -------ELH--------EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
+LH + ++ + ++ Y + N ++DA F +P V ++
Sbjct: 264 SCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMM 323
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
G ++ G E A+ LF++M S + + V ACA + +G+ VH L IK G
Sbjct: 324 VGLVRAGLGIE-AMGLFQFMIRSSIRF-DVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
F+ D + A+++ Y C+A A ++ ++ + N++I L G +D L FN
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441
Query: 309 RL----TEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
+ + + +Y S++K G V+ +V S + +++ +
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 501
Query: 355 VIPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
+I E ++ V+WN+++SG+ N E+A + + M + + TF+ +
Sbjct: 502 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 561
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
C+ L +++ G+ +H ++K + Y+ ++LVDMY++CG + D+ F + + +
Sbjct: 562 TCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS 621
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
W A++ GY+ HGLG EA+ +FE M ++++VPN ATFV VL AC GL ++G + F M
Sbjct: 622 WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMT 681
Query: 527 S-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
+ Y + P LEH+ C+VD+LGRS EA +FI MP + DAV+W LLS C ++E+
Sbjct: 682 THYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIA 741
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
E AA + LD S Y++LSN+YA GKW R+ L +KK+PGCSWIE+ S
Sbjct: 742 ELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSE 801
Query: 646 VHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+H F V D+ +P +Y L L +
Sbjct: 802 MHGFLVGDKAHPRSGELYEMLNDLIGEMK 830
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 243/552 (44%), Gaps = 69/552 (12%)
Query: 85 TTFSTILSVCAQLN--SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
TFS + CAQ +L G+ H ++ SG+ FV + LL YA C A+RVF
Sbjct: 16 VTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACARRVF 75
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
D + + + W+ ML Y +S A +F MP DVV W L+SGY + ++++
Sbjct: 76 DAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQR-GMFQESV 134
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
LF M G + P+ TF ++++C+ L G VH L +K G E D G AL++
Sbjct: 135 DLFVEMARRGVS-PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDM 193
Query: 263 YCGCEAFDGAMRVYDRLEN-----------PCLNASNSLINGL----------------- 294
Y C + D A+ + + C+ + + GL
Sbjct: 194 YGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQ-NEQYVRGLELFIEMQRLGLGVSQPS 252
Query: 295 -------------ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
++ GR A I N+ + ++ + +++ YA + D++R F +
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFS-SDRVVGTAIVDVYAKANSLTDARRAFFGL 311
Query: 342 PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
P+ ++ T N+M+ G V+ L +A+ L+ M + +I +
Sbjct: 312 PNHTV-----------------ETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 354
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
S +F AC+ QGQ +H +K+ F+ ++ V +++D+Y +C ++ +A F +
Sbjct: 355 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 414
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+ +W A++ +G + +L F ML + P+ T+ VL AC + G+ +
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMN 581
+ G+ + VVD+ + G + EA++ + D V W A+LS F +N
Sbjct: 475 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQK-LHDRIGGQQVVSWNAILSG--FSLN 531
Query: 582 MEVGERAAQKMF 593
E E AQK F
Sbjct: 532 KESEE--AQKFF 541
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 184/415 (44%), Gaps = 56/415 (13%)
Query: 216 PNEYTFDSVIRACARLG--AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P TF V ++CA+ G A G+ H ++ GF + L++ Y C A
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 72
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
RV+D + + N+++ G I A +F+ + + + +S+N+++ GY G +
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 334 SKRLFEKMPHRSIISLNTMISVIPE----------------------MERNPVTWNSMIS 371
S LF +M R + T +V+ + +E + T ++++
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192
Query: 372 GY-------------------------------VQNNLHEKALQLYMTMRKLAIDRTRST 400
Y VQN + + L+L++ M++L + ++ +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
++ F +C+ + L G+ LHAH +K F S+ VGT++VD+Y++ S+ DA+ +F +
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ V A+M G GLG EA+ LF+ M+ I + + GV SAC +G +
Sbjct: 313 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 372
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G + V+DL G+ L EA + M + D+V W A+++A
Sbjct: 373 VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 426
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 397 TRSTFSVLFHACSCLG--SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
R TFS +F +C+ G +L G+ HA +V + F +V L+ MY+RC A+
Sbjct: 14 ARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACARR 73
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV------------------ 496
F ++ + +W ++ YSH G S AV LF+ M + D+V
Sbjct: 74 VFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQES 133
Query: 497 -------------PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
P+ TF +L +C ++ G+++ G+ + + +VD+
Sbjct: 134 VDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDM 193
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
G+ L +A F MP E + V WGA ++ C
Sbjct: 194 YGKCRSLDDALCFFYGMP-ERNWVSWGAAIAGC 225
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 192/614 (31%), Positives = 326/614 (53%), Gaps = 53/614 (8%)
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYE-CFEFVGSGL 125
+++S + + R+ ++L T + +L CA SL GK +H + +G + F+ + L
Sbjct: 33 QAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHL 92
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
+ Y+ C + A +VFDE+ N W+ ML GY + + A +F KMP+KDVV W
Sbjct: 93 INMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWN 152
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
++ YAKS C AL+ +R +R G NEY+F ++ C ++ K HG ++
Sbjct: 153 TMVIAYAKS-GFCNDALRFYRELRRLGIGY-NEYSFAGLLNICVKVKELELSKQAHGQVL 210
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
GF + I ++++ Y C A R++D E+
Sbjct: 211 VAGFLSNLVISSSVLDAYAKCSEMGDARRLFD--------------------------EM 244
Query: 306 IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
I + +++ +M+ GYA +G V+ ++ LF+ MP E+NPV
Sbjct: 245 IIR-----DVLAWTTMVSGYAQWGDVEAARELFDLMP-----------------EKNPVA 282
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
W S+I+GY +++L KAL+L+ M L I + TFS A + + SL G+ +H +L+
Sbjct: 283 WTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLI 342
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEAV 484
+T N V +SL+DMYS+CG + + F + +V W +++ + HG G EA+
Sbjct: 343 RTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAI 402
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDL 543
+F+ M+ + P+ T + +L+AC +GLV EG++++ S+ S +GV+P EHY C++DL
Sbjct: 403 QMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDL 462
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
LGR+GH ++ MP + + +W ALL C N+E G A+K+ LD + +AY
Sbjct: 463 LGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAY 522
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
V+LS+I+A +G+W ++R+ + V+KD SWIE+ ++VH+F+ DR +P VIY
Sbjct: 523 VLLSSIHAAVGRWELVENVRQLMNERHVRKDRAISWIEIENKVHSFTASDRLHPLKEVIY 582
Query: 664 ATLEHLTANLNSVV 677
L+ L ++ V+
Sbjct: 583 LALKQLAGHMEEVL 596
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 183/348 (52%), Gaps = 15/348 (4%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N ++ + G++ AR LFD+MP + VVSWNTM+ Y+K +++L + R
Sbjct: 117 LYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRR 176
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ NE +F+ +L++C ++ L KQ H VL +G+ + S +L YA C E+ +
Sbjct: 177 LGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGD 236
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+R+FDE+ + L W+ M+ GY Q + A ++F MP+K+ V WT LI+GYA+ D
Sbjct: 237 ARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARH-DL 295
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
KAL+LF M P+++TF S + A A + + GK +HG LI+ + +
Sbjct: 296 GHKALELFTKMMALNIR-PDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVS 354
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPC-LNASNSLINGLISMGRIEDAELIFNRLT----E 312
+LI+ Y C + V+D + + + N++I+ L GR ++A +F+ + +
Sbjct: 355 SLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMK 414
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
+ I+ ++ + G V + RL+E S+ + VIP E
Sbjct: 415 PDRITLIVLLNACSHSGLVQEGLRLYE--------SITSCHGVIPNQE 454
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 224/706 (31%), Positives = 362/706 (51%), Gaps = 78/706 (11%)
Query: 5 ATQSQTLMTQ--------ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTML 56
ATQ+Q +Q ++ I N AI+ R G+ A +F +MP + VS+N M+
Sbjct: 43 ATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMI 102
Query: 57 CGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYE 116
GY + +F+ + L M ++ N +I G + L E
Sbjct: 103 SGYLRNGEFELARKLFDEMPERDL--------------VSWNVMIKG-YVRNRNLGKARE 147
Query: 117 CFEFVG-------SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
FE + + +L YA +++A+ VFD + E N++ W+ +L YVQ + M +A
Sbjct: 148 LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEA 207
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+F +V W L+ G+ K E A + F M N+ + +++++I A
Sbjct: 208 CMLFKSRENWALVSWNCLLGGFVKKKKIVE-ARQFFDSM-----NVRDVVSWNTIITGYA 261
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDES------IGGALIEFYCGCEAFDGAMRVYDRLENPC 283
+ G E + + FDES A++ Y + A ++D++
Sbjct: 262 QSGKIDEARQL----------FDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN 311
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+ N+++ G + R+E A+ +F+ + N ++N+MI GYA G++ ++K LF+KMP
Sbjct: 312 EVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP- 370
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
+R+PV+W +MI+GY Q+ +AL+L++ M + RS+FS
Sbjct: 371 ----------------KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
C+ + +L+ G+ LH LVK +E+ +VG +L+ MY +CGSI +A F ++ +
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+ +W ++ GYS HG G A+ FE M + + P+ AT V VLSAC GLV++G + F
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFY 534
Query: 524 SM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
+M + YGV+P +HY C+VDLLGR+G L +A +K+MP E DA +WG LL A N
Sbjct: 535 TMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNT 594
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
E+ E AA K+F ++ + YV+LSN+YA G+WG +R R+ VKK PG SWIE+
Sbjct: 595 ELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEI 654
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHLTANLN--------SVVLFD 680
++ H FSV D +P + I+A LE L + SVVL D
Sbjct: 655 QNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 700
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 219/749 (29%), Positives = 355/749 (47%), Gaps = 95/749 (12%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N +T G + TA LFD MP VVSWN ++ GY + F ES+ L M R
Sbjct: 126 VSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARR 185
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG-------------- 124
V + TTF+ +L C+ L L G Q+H L +K+G E GS
Sbjct: 186 GVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDA 245
Query: 125 LLFFY--------------ANCFEIEEAKRVFD--------------------------- 143
L FFY A C + E+ R +
Sbjct: 246 LCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAM 305
Query: 144 -------ELH--------EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
+LH + ++ + ++ Y + N ++DA F +P V ++
Sbjct: 306 SCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMM 365
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
G ++ G E A+ LF++M S + + V ACA + +G+ VH L IK G
Sbjct: 366 VGLVRAGLGIE-AMGLFQFMIRSSIRF-DVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 423
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
F+ D + A+++ Y C+A A ++ ++ + N++I L G +D L FN
Sbjct: 424 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 483
Query: 309 RL----TEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
+ + + +Y S++K G V+ +V S + +++ +
Sbjct: 484 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 543
Query: 355 VIPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
+I E ++ V+WN+++SG+ N E+A + + M + + TF+ +
Sbjct: 544 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 603
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
C+ L +++ G+ +H ++K + Y+ ++LVDMY++CG + D+ F + + +
Sbjct: 604 TCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS 663
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
W A++ GY+ HGLG EA+ +FE M ++++VPN ATFV VL AC GL ++G + F M
Sbjct: 664 WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMT 723
Query: 527 S-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
+ Y + P LEH+ C+VD+LGRS EA +FI MP + DAV+W LLS C ++E+
Sbjct: 724 THYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIA 783
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
E AA + LD S Y++LSN+YA GKW R+ L +KK+PGCSWIE+ S
Sbjct: 784 ELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSE 843
Query: 646 VHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+H F V D+ +P +Y L L +
Sbjct: 844 MHGFLVGDKAHPRSGELYEMLNDLIGEMK 872
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 139/553 (25%), Positives = 243/553 (43%), Gaps = 69/553 (12%)
Query: 84 ETTFSTILSVCAQLN--SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
TFS + CAQ +L G+ H ++ SG+ FV + LL YA C A+RV
Sbjct: 57 RVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACARRV 116
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD + + + W+ ML Y +S A +F MP DVV W L+SGY + +++
Sbjct: 117 FDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQR-GMFQES 175
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+ LF M G + P+ TF ++++C+ L G VH L +K G E D G AL++
Sbjct: 176 VDLFVEMARRGVS-PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 234
Query: 262 FYCGCEAFDGAMRVYDRLEN-----------PCLNASNSLINGL---------------- 294
Y C + D A+ + + C+ + + GL
Sbjct: 235 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQ-NEQYVRGLELFIEMQRLGLGVSQP 293
Query: 295 --------------ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
++ GR A I N+ + ++ + +++ YA + D++R F
Sbjct: 294 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFS-SDRVVGTAIVDVYAKANSLTDARRAFFG 352
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+P+ ++ T N+M+ G V+ L +A+ L+ M + +I +
Sbjct: 353 LPNHTV-----------------ETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVS 395
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
S +F AC+ QGQ +H +K+ F+ ++ V +++D+Y +C ++ +A F +
Sbjct: 396 LSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK 455
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ +W A++ +G + +L F ML + P+ T+ VL AC + G+
Sbjct: 456 QKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLM 515
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWM 580
+ + G+ + VVD+ + G + EA++ + D V W A+LS F +
Sbjct: 516 VHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQK-LHDRIGGQQVVSWNAILSG--FSL 572
Query: 581 NMEVGERAAQKMF 593
N E E AQK F
Sbjct: 573 NKESEE--AQKFF 583
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 184/415 (44%), Gaps = 56/415 (13%)
Query: 216 PNEYTFDSVIRACARLG--AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P TF V ++CA+ G A G+ H ++ GF + L++ Y C A
Sbjct: 55 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 114
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
RV+D + + N+++ G I A +F+ + + + +S+N+++ GY G +
Sbjct: 115 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 174
Query: 334 SKRLFEKMPHRSIISLNTMISVIPE----------------------MERNPVTWNSMIS 371
S LF +M R + T +V+ + +E + T ++++
Sbjct: 175 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 234
Query: 372 GY-------------------------------VQNNLHEKALQLYMTMRKLAIDRTRST 400
Y VQN + + L+L++ M++L + ++ +
Sbjct: 235 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 294
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
++ F +C+ + L G+ LHAH +K F S+ VGT++VD+Y++ S+ DA+ +F +
Sbjct: 295 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 354
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ V A+M G GLG EA+ LF+ M+ I + + GV SAC +G +
Sbjct: 355 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 414
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G + V+DL G+ L EA + M + D+V W A+++A
Sbjct: 415 VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 468
>gi|225432410|ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 201/643 (31%), Positives = 326/643 (50%), Gaps = 53/643 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ T I + G++ +AR LFD+MP + V+WN ML YS+ ++L L M
Sbjct: 5 LFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRI 64
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+N + + TF+ LS CA L L G +IH V+ SG + VG+ L+ Y C
Sbjct: 65 ANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATS 124
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+RVF+E+ NE+ W +L Y L A VF MPKK + W +ISGY + D
Sbjct: 125 ARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGD- 183
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E L LF+ MRE P+++TF +++ A L G ++HG +IK G+ +
Sbjct: 184 VELCLGLFKKMREDSLQ-PDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSN 242
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
+++ FY D M+V++ + G+++ +S
Sbjct: 243 SILSFYSKLGCKDDVMKVFESI-------------GILT------------------QVS 271
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+N+MI + G ++ +F+ P E+N V+W SMI+GY +N
Sbjct: 272 WNAMIDAHMKIGDTHEAFLVFQLAP-----------------EKNVVSWTSMITGYARNG 314
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
E+AL ++ M + I TF + HACS L +L G+++H ++ F + V VG
Sbjct: 315 HGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGN 374
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
LV+MY++CG I + +F I ++ +W A++ G HG ++A+ L+E M+ + P
Sbjct: 375 GLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKP 434
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
+ TF+G+L C +GL+ +G +F SM S YG+ EH C+VDLLGR G+L +A E
Sbjct: 435 DKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQAREL 494
Query: 557 IKDMPI--ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
+ + + + ALL AC+ + +G + + + + +YV+LSN+Y V G
Sbjct: 495 VDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSG 554
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+W + +RK +T VKK PGCSWIE+ ++V F + ++P
Sbjct: 555 QWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNHSHP 597
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 10/192 (5%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
MK++ +S ++TQ VS N I + G A +F P + VVSW +M+ GY+
Sbjct: 258 MKVF--ESIGILTQ----VSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYA 311
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ +++LS M ++++ ++ TF +L C+ L +L GK IH ++ G+ +
Sbjct: 312 RNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVD 371
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP--- 177
VG+GL+ YA C +I+ + F E+ + + W+ ML G + A +++ +M
Sbjct: 372 VGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASG 431
Query: 178 -KKDVVVWTKLI 188
K D V + L+
Sbjct: 432 MKPDKVTFIGLL 443
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+H+HL +T TS + ++ G I A+ F + + AW A++ YS GL
Sbjct: 1 MHSHLFQT---------TSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGL 51
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
+A+ LF M + P+ TF LSAC G + GMKI + G +L
Sbjct: 52 HQQALCLFHHMRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNS 111
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++D+ G+ A ++M I ++ V W +LL A
Sbjct: 112 LIDMYGKCLSATSARRVFEEMSI-MNEVSWCSLLFA 146
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 200/627 (31%), Positives = 339/627 (54%), Gaps = 31/627 (4%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK--FDESLSLVSTMH 76
+S +T NG + AR +F++MP RT S+N M+ Y++ E+ L + M
Sbjct: 142 ISWTAMLTAYYENGHIAKARKMFEKMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMR 201
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS-GLLFFYANCFEI 135
N +++ +++ A+ + + ++++ L++ E + V S L+ Y +
Sbjct: 202 ERN----SISYAAMITGLARAGMVDNAEELY---LETPVEWRDPVCSNALISGYLKVGRL 254
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
EEA R+F+ + E + + WS M+ GY + + A ++F +MP+++VV WT +I G+ K
Sbjct: 255 EEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKM- 313
Query: 196 DGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
GC E LF MR+ G N T + AC+ G + EG +HGL+ + GFEFD
Sbjct: 314 -GCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVF 372
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+G A+I YC A +++D + + + N+LI G + +E+ ++F + + +
Sbjct: 373 LGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKD 432
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
IS+ +MI G++ G++ S LF MP +++ + W ++ISG+V
Sbjct: 433 VISWTTMITGFSNKGKMGKSIELFRMMP-----------------KQDDIAWTAVISGFV 475
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
N +E+A+ ++ M + + T S + A + L +L QG +H +VK E ++
Sbjct: 476 GNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLS 535
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+ SLV MY++CG++ D F+SI+SPN+ ++ +++ G++ +G G EA+ LF ML +
Sbjct: 536 IQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEG 595
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEA 553
PN TF+GVLSAC GL+ +G F+SMKS Y + P HY C+VDLLGR+G L +A
Sbjct: 596 QKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDA 655
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
+ I+ MP E + VWGALL A + ++V + AAQ++F L+ + Y +LS +Y+
Sbjct: 656 IDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSA 715
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWI 640
G+ +R VKK G SWI
Sbjct: 716 GRNRDSEQVRMAQGLKGVKKSAGYSWI 742
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 157/343 (45%), Gaps = 29/343 (8%)
Query: 298 GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS--- 354
G +++AE IF+R+ N+IS+ +M+ Y G + ++++FEKMP R+ S N MI+
Sbjct: 124 GDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTASYNAMITAYT 183
Query: 355 ------------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
+ EM ERN +++ +MI+G + + + A +LY+ D S
Sbjct: 184 RSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAEELYLETPVEWRDPVCSNA 243
Query: 402 SVLFHACSCLGSLQQGQLLHA-HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ G L+ G+L A + + E +V +S+VD Y + G I A+ F +
Sbjct: 244 LI-------SGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMP 296
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP-NAATFVGVLSACVRAGLVNEGM 519
NV WTA+++G+ G LF M ++ V N T + AC G EG+
Sbjct: 297 ERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGI 356
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
++ + G + ++ + R + EA + I DM D V W AL++ +
Sbjct: 357 QMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARK-IFDMMNRKDVVSWNALIAG--YV 413
Query: 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
N EV E +K + ++ + ++ GK GK +++
Sbjct: 414 QNDEV-EEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIEL 455
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLV 72
TQ+ ++S IT G++ + LF MP + ++W ++ G+ +++E++
Sbjct: 428 TQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWF 487
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M R V+ N T S++LS A L +L G QIH LV+K G E + + L+ Y C
Sbjct: 488 IEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKC 547
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
+ + ++F ++ N + ++ M+ G+ Q +G+
Sbjct: 548 GNVADGHQIFTSINSPNIVSFNSMITGFAQ--------------------------NGFG 581
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
E+AL+LF M G+ PNE TF V+ AC +G +G
Sbjct: 582 ------EEALELFHKMLNEGQK-PNEITFLGVLSACTHVGLLEQG 619
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 191/644 (29%), Positives = 326/644 (50%), Gaps = 51/644 (7%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N ++ ++G+L AR +F QMP R VSW M+ G ++ +F +++ M +
Sbjct: 101 NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLA 160
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ + +LS CA + G+++H V+K G V + +L+ Y C + E A+ V
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAV 220
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK- 200
F+ + +E W+ M+ Y M A +F M ++ +V W +I+GY + +G +
Sbjct: 221 FERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQ--NGLDDM 278
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
ALK F M + P+E+T SV+ ACA L GK +H +++ G + I ALI
Sbjct: 279 ALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALI 338
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNS 320
Y + + A R+ D+ + + N IS+ +
Sbjct: 339 STYAKSGSVETARRIMDKAV-----------------------------VADLNVISFTA 369
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
+++GY G ++ +F+ M +R +I+ W +MI GY QN ++
Sbjct: 370 LLEGYVKLGDTKQAREVFDVMNNRDVIA-----------------WTAMIVGYEQNGQND 412
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+A++L+ +M + + T + + AC+ L L G+ +H +++ E +V V +++
Sbjct: 413 EAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAII 472
Query: 441 DMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+Y+R GS+ A+ F I WT+++ + HGLG +A++LFE ML + P+
Sbjct: 473 TVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDR 532
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
T++GV SAC AG +++G + + M +G+VP + HY C+VDLL R+G L EA EFI+
Sbjct: 533 VTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQ 592
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
MP+ D VVWG+LL+AC N ++ E AA+K+ +D AY L+N+Y+ G+W
Sbjct: 593 RMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWND 652
Query: 619 KMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
I K VKK+ G SW + S+VH F +D +P + I
Sbjct: 653 AARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAI 696
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/536 (24%), Positives = 237/536 (44%), Gaps = 104/536 (19%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN------CFEIEEAKR 140
F+ +L + + G+ IH +K+G ++ + LL +YA CF EA+R
Sbjct: 28 FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFH--EARR 85
Query: 141 VFDEL--HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+FD++ N W+ +L Y + ++DA VF +MP++D V WT ++ G ++
Sbjct: 86 LFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFW 145
Query: 199 EKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+ A+K F M GE + P+++ +V+ +CA A G+ VH +IK G
Sbjct: 146 D-AVKTFLDM--VGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGL-------- 194
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
+ C+ +NS++ G E A +F R+ + S
Sbjct: 195 -----------------------SSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESS 231
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+N+M+ Y G++D + +FE M RSI+S WN++I+GY QN
Sbjct: 232 WNAMVSLYTHQGRMDLALSMFENMEERSIVS-----------------WNAIIAGYNQNG 274
Query: 378 LHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT--PFES--- 431
L + AL+ + M +++ T + + AC+ L L+ G+ +H+++++T P+ S
Sbjct: 275 LDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIM 334
Query: 432 ----------------------------NVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
NV T+L++ Y + G A+ F +++ +
Sbjct: 335 NALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRD 394
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI-- 521
V AWTA++ GY +G EA+ LF M+ PN+ T VLSAC + G +I
Sbjct: 395 VIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHC 454
Query: 522 --FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
RS++ V + ++ + RSG + A + + V W +++ A
Sbjct: 455 RAIRSLQEQSVSVS----NAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVA 506
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 211/445 (47%), Gaps = 34/445 (7%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRS 78
S N ++ G++ A ++F+ M R++VSWN ++ GY++ D +L S M S
Sbjct: 231 SWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTAS 290
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+++ +E T +++LS CA L L GKQ+H +L++G + + L+ YA +E A
Sbjct: 291 SMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETA 350
Query: 139 KRVFDE--LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+R+ D+ + + N + ++ +L GYV+ A +VF M +DV+ WT +I GY ++
Sbjct: 351 RRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQ 410
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
++A++LFR M SG PN +T +V+ ACA L GK +H I+ E S+
Sbjct: 411 N-DEAMELFRSMIRSGPE-PNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVS 468
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNAS----NSLINGLISMGRIEDAELIFNRL-- 310
A+I Y + A RV+D++ C S+I L G E A ++F +
Sbjct: 469 NAIITVYARSGSVPLARRVFDQI---CWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLR 525
Query: 311 --TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
+ + ++Y + G +D KR +E+M LN ++PEM +
Sbjct: 526 VGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQM-------LNEH-GIVPEMSHYACMVDL 577
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT- 427
+ + HE ++++ + + L AC + +L L+
Sbjct: 578 LARAGLLTEAHE-------FIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSID 630
Query: 428 PFESNVYVGTSLVDMYSRCGSINDA 452
P S Y ++L ++YS CG NDA
Sbjct: 631 PDNSGAY--SALANVYSACGRWNDA 653
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 79/184 (42%), Gaps = 42/184 (22%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLV 72
QE + +N IT R+G + AR +FDQ+ R V+W +M+ ++ ++++ L
Sbjct: 461 QEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLF 520
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M R VK + T+ + S C +G+
Sbjct: 521 EEMLRVGVKPDRVTYIGVFSACTH----------------AGF----------------- 547
Query: 133 FEIEEAKRVFDELHEDNELL-----WSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTK 186
I++ KR ++++ ++ ++ ++ M+ + L+++A + +MP D VVW
Sbjct: 548 --IDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGS 605
Query: 187 LISG 190
L++
Sbjct: 606 LLAA 609
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 217/694 (31%), Positives = 349/694 (50%), Gaps = 62/694 (8%)
Query: 4 YATQSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPI-RTVVSWNTMLCGY 59
+ TQ L L I N + G G + AR +FD+ R VSWN ++ Y
Sbjct: 118 FGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAY 177
Query: 60 SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
K + ++ + M V+ NE FS +++ C L G+++H +V+++GY+
Sbjct: 178 VKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDV 237
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
F + L+ Y+ +I A VF K+P+
Sbjct: 238 FTANALVDMYSKLGDIRMAAVVFG-------------------------------KVPET 266
Query: 180 DVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
DVV W ISG + G ++ AL+L M+ SG +PN +T S+++ACA GAF G+
Sbjct: 267 DVVSWNAFISGCV--LHGHDQHALELLLQMKSSGL-VPNVFTLSSILKACAGSGAFNLGR 323
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+HG ++K + D I L++ Y D A +V+D + L N+LI+G
Sbjct: 324 QIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGA 383
Query: 299 RIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS------ 348
+ +A +F R+ + N + +++K A + D++++ +S
Sbjct: 384 QHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVN 443
Query: 349 -----------LNTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
LN V + + + + SMI+ Q + E A++L+M M + +D
Sbjct: 444 GLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDP 503
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
S L +AC+ L + +QG+ +HAHL+K F S+V+ G +LV Y++CGSI DA +F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAF 563
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
S + V +W+A++ G + HG G A+ +F M+++ I PN T VL AC AGLV+
Sbjct: 564 SGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVD 623
Query: 517 EGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
E + F SMK +G+ T EHY C++DLLGR+G L +A E + MP + +A VWGALL+A
Sbjct: 624 EAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAA 683
Query: 576 CWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
+ E+G AA+K+F L+ + +V+L+N YA G W +RK + +VKK+P
Sbjct: 684 SRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEP 743
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
SW+EL +VH F V D+++P IYA L+ L
Sbjct: 744 AMSWVELKDKVHTFIVGDKSHPRARDIYAKLDEL 777
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 135/567 (23%), Positives = 228/567 (40%), Gaps = 111/567 (19%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T +L+ A SL+ G IH +LKSG F + LL FY+ C A+RV
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGL--FAVFRNHLLSFYSKCRLPGSARRV---- 59
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
F ++P V W+ L++ Y+ + AL F
Sbjct: 60 ---------------------------FDEIPDPCHVSWSSLVTAYSNNA-MPRDALGAF 91
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
R MR NE+ V++ CA F G +H L + G D + AL+ Y G
Sbjct: 92 RSMRSCSVRC-NEFVLPVVLK-CAPDAGF--GTQLHALAMATGLGGDIFVANALVAMYGG 147
Query: 266 CEAFDGAMRVYDRLENPCLNAS---NSLINGLISMGRIEDAELIFNRLT----EANSISY 318
D A V+D E C + N L++ + R A +F + + N +
Sbjct: 148 FGFVDEARMVFD--EAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGF 205
Query: 319 NSMIKGYAVYGQVD-DSKRLFEKMPHRS-----IISLNTMISVIPEM------------- 359
+ ++ A G D ++ R M R+ + + N ++ + ++
Sbjct: 206 SCVVN--ACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKV 263
Query: 360 -ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
E + V+WN+ ISG V + + AL+L + M+ + T S + AC+ G+ G+
Sbjct: 264 PETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGR 323
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H +VK +S+ Y+ LVDMY++ G ++DA+ F I ++ W AL++G SH
Sbjct: 324 QIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGA 383
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSAC--------------------------VRA 512
+EA+ LF M ++ N T VL + V
Sbjct: 384 QHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVN 443
Query: 513 GLV---------NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM--- 560
GL+ N ++F SY ++ +T ++ L + H +A + +M
Sbjct: 444 GLIDSYWKCDCLNYAYRVFEKHGSYDIIA----FTSMITALSQCDHGEDAIKLFMEMLRK 499
Query: 561 PIELDAVVWGALLSACWFWMNMEVGER 587
++ D V +LL+AC E G++
Sbjct: 500 GLDPDPFVLSSLLNACASLSAYEQGKQ 526
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 5/180 (2%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
R+ T L + SL QG +HAHL+K+ + L+ YS+C A+
Sbjct: 2 RSLETIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRV 59
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F I P +W++L+ YS++ + +A+ F M + N VL AG
Sbjct: 60 FDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGF- 118
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G ++ + G+ + +V + G G + EA + E + V W L+SA
Sbjct: 119 --GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSA 176
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 204/634 (32%), Positives = 330/634 (52%), Gaps = 55/634 (8%)
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
C L D K+IHC ++K+ F+ + L+ YA I A+RVFD++ + N W
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ +L Y + + + VF MP +D+V W LIS YA +++K + M +G
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGR-GFLLQSVKAYNLMLYNGP 137
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
N +++ ++ G G VHG ++K GF+ +G L++ Y A
Sbjct: 138 FNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCAR 197
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
+ +D + + N+LI GL+ RIED+ +F + E +SIS+ +MI G+ G +
Sbjct: 198 QAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDRE 257
Query: 334 SKRLFEKMP------------------------------HRSII---------------- 347
+ LF +M H II
Sbjct: 258 AIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVD 317
Query: 348 ------SLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
S+ + +V +M +N V+W +M+ GY QN E+A++++ M+ I+ T
Sbjct: 318 MYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFT 377
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ +C+ L SL++G H + + S + V +LV +Y +CGSI D+ FS +S
Sbjct: 378 LGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMS 437
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ +WTAL++GY+ G +E + LFE ML P+ TF+GVLSAC RAGLV +G +
Sbjct: 438 YVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQ 497
Query: 521 IFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
IF SM K + ++P +HYTC++DL R+G L EA +FI MP DA+ W +LLS+C F
Sbjct: 498 IFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFH 557
Query: 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSW 639
NME+G+ AA+ + L+ ++Y++LS+IYA GKW + ++RK + ++K+PGCSW
Sbjct: 558 RNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSW 617
Query: 640 IELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
I+ ++VH FS +D++NP + IY+ LE L +
Sbjct: 618 IKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKM 651
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 249/516 (48%), Gaps = 66/516 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL------------ 69
N ++ + ++ AR +FDQMP R + SWNT+L YSK A E
Sbjct: 48 NNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMV 107
Query: 70 ---SLVST-----------------MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCL 109
SL+S ++ LN ST+L + ++ + G Q+H
Sbjct: 108 SWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGH 167
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
V+K G++ + FVGS L+ Y+ + A++ FDE+ E N ++++ ++ G ++C+ + D+
Sbjct: 168 VVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDS 227
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRAC 228
+F M +KD + WT +I+G+ + +G ++ A+ LFR MR M ++YTF SV+ AC
Sbjct: 228 RQLFYDMQEKDSISWTAMIAGFTQ--NGLDREAIDLFREMRLENLEM-DQYTFGSVLTAC 284
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
+ A EGK VH +I+ ++ + +G AL++ YC C++ A V+ ++ + +
Sbjct: 285 GGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWT 344
Query: 289 SLINGLISMGRIEDAELIF----NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
+++ G G E+A IF N E + + S+I A +++ + +
Sbjct: 345 AMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVS 404
Query: 345 SIISL----NTMISV------IPEMER--------NPVTWNSMISGYVQNNLHEKALQLY 386
+IS N ++++ I + R + V+W +++SGY Q + L+L+
Sbjct: 405 GLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLF 464
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK----TPFESNVYVGTSLVDM 442
+M + TF + ACS G +Q+G + ++K P E + T ++D+
Sbjct: 465 ESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHY---TCMIDL 521
Query: 443 YSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
+SR G + +A+ + + SP+ W +L++ H
Sbjct: 522 FSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFH 557
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 89/216 (41%), Gaps = 33/216 (15%)
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
L + + ++ S+ H C L + + +H H++K +++ +LV Y++ I
Sbjct: 3 LHVSKQFNSMSLSNHYCELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITY 62
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP-----NAATFVGVL 506
A+ F + N+ +W L++ YS E +F M +D+V +A G L
Sbjct: 63 ARRVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFL 122
Query: 507 SACVRA---------------------------GLVNEGMKIFRSMKSYGVVPTLEHYTC 539
V+A G V+ G+++ + +G + +
Sbjct: 123 LQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSP 182
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+VD+ ++G + A + +MP E + V++ L++
Sbjct: 183 LVDMYSKTGLVFCARQAFDEMP-EKNVVMYNTLIAG 217
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 218/663 (32%), Positives = 338/663 (50%), Gaps = 62/663 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G LV A +F +M R + SWN ++ GY+K FDE+L+L M ++ + TF
Sbjct: 141 RFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPC 200
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C L L G+++H V++ G+E V + L+ Y C +I A+ VFD + +
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRD 260
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ GY + D C + L+LF MR
Sbjct: 261 RISWNAMISGYFEN--------------------------------DVCLEGLRLFFMMR 288
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E + P+ T SVI AC LG G+ VHG +IK GF + S+ +LI+ + +
Sbjct: 289 EFFVD-PDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCW 347
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGY 325
D A V+ ++E L + ++I+G G E A + + + I+ S++
Sbjct: 348 DEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSAC 407
Query: 326 AVYGQVDDSKRLFEKMPHRS----IISLNTMISV----------------IPEMERNPVT 365
A G +D L E +I N++I + IP +N ++
Sbjct: 408 AGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP--NKNVIS 465
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
W S+I G N +AL + M L++ T + AC+ +G+L G+ +HAH +
Sbjct: 466 WTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHAL 524
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+T + ++ +L+DMY RCG + A F+S +VA+W L+ GY+ G G AV
Sbjct: 525 RTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVE 583
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLL 544
LF M+E D+ P+ TF +L AC R+G+V +G++ F SM+ + + P L+HY VVDLL
Sbjct: 584 LFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLL 643
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L +A EFIK MPI+ D +WGALL+AC + N+E+GE AAQ +F +D K + Y+
Sbjct: 644 GRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYI 703
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+L N+YA GKW + +RK + + DPGCSW+E+ +VHAF D +P I A
Sbjct: 704 LLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINA 763
Query: 665 TLE 667
LE
Sbjct: 764 VLE 766
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 137/533 (25%), Positives = 235/533 (44%), Gaps = 58/533 (10%)
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
+++L + +M V + E T+ +L +C + +G ++H V K+ +G+
Sbjct: 75 LEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNA 134
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
LL + ++ EA VF ++ E + W++++ GY + +A +++ +M +W
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRM------LW 188
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
+ P+ YTF V+R C L G+ VH +
Sbjct: 189 VGI---------------------------RPDVYTFPCVLRTCGGLPDLARGREVHLHV 221
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR-IEDA 303
I+ GFE D + ALI Y C A V+DR+ + N++I+G +E
Sbjct: 222 IRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGL 281
Query: 304 ELIF---NRLTEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLN 350
L F + + ++ S+I G V+G V + + E + S+I ++
Sbjct: 282 RLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMH 341
Query: 351 TMISVIPEME--------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
+ + E E ++ V+W +MISGY +N L EKA++ Y M + T +
Sbjct: 342 SSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIA 401
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ AC+ LG L +G +LH +T S V V SL+DMYS+C I+ A F I +
Sbjct: 402 SVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK 461
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
NV +WT+++ G + EA+ F+ M+ + PN+ T V VLSAC R G ++ G +I
Sbjct: 462 NVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIH 520
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G+ ++D+ R G + A E D W LL+
Sbjct: 521 AHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS--CEKDVASWNILLTG 571
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 207/481 (43%), Gaps = 55/481 (11%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + N IT + G + +AR +FD+MP R +SWN M+ GY + E L L
Sbjct: 227 ESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFM 286
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M V + T ++++S C L G+++H V+K+G+ V + L+ +++
Sbjct: 287 MREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGC 346
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+EA+ VF ++ + + W+ M+ GY + L A + + M + VV
Sbjct: 347 WDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVV------------ 394
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
P+E T SV+ ACA LG +G ++H + G
Sbjct: 395 ---------------------PDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI 433
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT--- 311
+ +LI+ Y C D A+ V+ R+ N + + S+I GL R +A F ++
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSL 493
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRL----------FEKMPHRSIISLNTMISVIPEM-- 359
+ NS++ S++ A G + K + F+ +++ + +
Sbjct: 494 KPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN 553
Query: 360 -----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
E++ +WN +++GY Q A++L+ M + ++ TF+ L ACS G +
Sbjct: 554 QFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMV 613
Query: 415 QQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMN 472
G + + K N+ S+VD+ R G + DA + P+ A W AL+N
Sbjct: 614 TDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLN 673
Query: 473 G 473
Sbjct: 674 A 674
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 4/215 (1%)
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
+NP NS+I EKAL +M++L + T+ L C + +G +
Sbjct: 60 QNP---NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRV 116
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H+++ KT V +G +L+ M+ R G + +A F ++ ++ +W L+ GY+ G
Sbjct: 117 HSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYF 176
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
EA+ L+ ML I P+ TF VL C + G ++ + YG ++ +
Sbjct: 177 DEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNAL 236
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + + G + A MP D + W A++S
Sbjct: 237 ITMYVKCGDIFSARLVFDRMP-RRDRISWNAMISG 270
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 194/665 (29%), Positives = 334/665 (50%), Gaps = 55/665 (8%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L AR + ++MPI+ V WN L + E++ L M + ++LN+ F++++S
Sbjct: 40 LQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISA 99
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
A L G+ IH V K G+E + + + Y +E + F + +N
Sbjct: 100 AASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASR 159
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ +L G+ + I++ L+ G+
Sbjct: 160 NNLLSGFCDTETCDQGPRILIQL----------LVEGFE--------------------- 188
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
PN YTF S+++ CA G EGK +HG +IK G D + +L+ Y C + + A
Sbjct: 189 --PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYAC 246
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA---NSISYNSMIKGYAVYGQ 330
+V+ + + + +LI G ++ G + L E N ++ S+++ +
Sbjct: 247 KVFGEIPERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 306
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNSMISG 372
VD K++ ++ S+ + + + + +M +R+ W +++G
Sbjct: 307 VDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAG 366
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
Y Q+ EKA++ ++ M++ + T + CS + +L G+ LH+ +K +
Sbjct: 367 YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGD 426
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
++V ++LVDMY++CG + DA+ F + S + +W ++ GYS HG G +A+ FE ML+
Sbjct: 427 MFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLD 486
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
+ VP+ TF+GVLSAC GL+ EG K F S+ K YG+ PT+EHY C+VD+LGR+G H
Sbjct: 487 EGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFH 546
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
E E FI++M + + ++W +L AC N+E GERAA K+F L+ + S Y++LSN++A
Sbjct: 547 EVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFA 606
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
G W ++R ++ VKK+PGCSW+E+N +VH F D ++P I+ L+ L
Sbjct: 607 AKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQ 666
Query: 672 NLNSV 676
L SV
Sbjct: 667 KLMSV 671
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 212/444 (47%), Gaps = 26/444 (5%)
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
LWS ++ YV+C + A V +MP +DV W + +S A S ++A++LF MR +
Sbjct: 26 LWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSS-ANSPYPLQEAVQLFYLMRHT 84
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+ N++ F S+I A A LG G+ +H + K GFE D I A + Y ++ +
Sbjct: 85 RIRL-NQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVEN 143
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIK---- 323
+ + + L + N+L++G + I +L E N ++ S++K
Sbjct: 144 GWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCAS 203
Query: 324 ------GYAVYGQVDDSKRLFEKMPHRSII-------SLNTMISVIPEM-ERNPVTWNSM 369
G A++GQV S + S++ S N V E+ ER+ V+W ++
Sbjct: 204 KGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTAL 263
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
I+G+V + L+++ M + TF + +CS L + G+ +HA +VK
Sbjct: 264 ITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSL 322
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ N +VGT+LVDMY++ + DA+ F+ + ++ AWT ++ GY+ G G +AV F
Sbjct: 323 DGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQ 382
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
M + + PN T LS C R ++ G ++ G + + +VD+ + G
Sbjct: 383 MQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGC 442
Query: 550 LHEAEEFIKDMPIELDAVVWGALL 573
+ +A E + D + D V W ++
Sbjct: 443 VEDA-EVVFDGLVSRDTVSWNTII 465
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 211/511 (41%), Gaps = 68/511 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ I+ +N +T + + F M I + S N +L G+ D+ ++
Sbjct: 122 ESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQ 181
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
+ + N TF +IL CA L +GK IH V+KSG + + L+ YA C
Sbjct: 182 LLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGS 241
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
A +VF E+ E + + W+ ++ G+V
Sbjct: 242 ANYACKVFGEIPERDVVSWTALITGFV--------------------------------- 268
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+G L++F M G N PN YTF S++R+C+ L GK VH ++K + ++
Sbjct: 269 AEGYGSGLRIFNQMLAEGFN-PNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDF 327
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---- 310
+G AL++ Y + A +++RL L A ++ G G+ E A F ++
Sbjct: 328 VGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG 387
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLF----------EKMPHRSIISLNTMISVIPEME 360
+ N + S + G + +D ++L + +++ + + + E
Sbjct: 388 VKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAE 447
Query: 361 --------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
R+ V+WN++I GY Q+ KAL+ + M TF + ACS +G
Sbjct: 448 VVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMG 507
Query: 413 SLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAW 467
+++G+ L K TP + +VD+ R G ++ ++ + + NV W
Sbjct: 508 LIEEGKKHFNSLSKIYGITP---TIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIW 564
Query: 468 TALMNGYSHHG---LGSEAVL-LFEIMLEQD 494
++ HG G A + LFE+ E D
Sbjct: 565 ETVLGACKMHGNIEFGERAAMKLFELEPEID 595
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 59/140 (42%)
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
++K + ++ +SLV++Y +C S+ A+ + +V W ++ + EA
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
V LF +M I N F ++SA G + G I + YG + V +
Sbjct: 75 VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134
Query: 544 LGRSGHLHEAEEFIKDMPIE 563
++ + +F K M IE
Sbjct: 135 YMKTQSVENGWQFFKAMMIE 154
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 206/627 (32%), Positives = 330/627 (52%), Gaps = 53/627 (8%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N I+ ++GQL A LFD+MP++ VS+ TM+ G+S+ +++++ L M
Sbjct: 133 VSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNV 192
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
V NE T +T++S + + + +H LV+K +E F V + LL Y C + EA
Sbjct: 193 GVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEA 252
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +FDE+ E N + W++ML GY + + A VF ++P KD+V W +I GY + V+
Sbjct: 253 RALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVR-VERI 311
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+AL ++R M +G PN+ +I C R A EG+ + ++K GF+ + I
Sbjct: 312 NEALMMYRSMISAGWE-PNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQST 370
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
+I Y C GRI +A L F ++ N S+
Sbjct: 371 IIHLYAAC-------------------------------GRINEACLQFRIGSKENVASW 399
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N++I GY +D + LF +MP R + S W++MISGY QN
Sbjct: 400 NALIAGYVRNRMIDRAMELFNEMPERDVFS-----------------WSTMISGYTQNEQ 442
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
AL+L+ M I T + A + G+L++G+ H ++ + + +
Sbjct: 443 PNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAA 502
Query: 439 LVDMYSRCGSINDAQASFSSI--SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
++DMY++CGSIN+A F I + V+ W A++ G + HG + ++ +F + + I
Sbjct: 503 IIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIK 562
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
NA TF+GVL+AC GLV G + F SMKS + + P ++HY C+VDLLGR+G L EAEE
Sbjct: 563 LNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEE 622
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
I+ MP++ D V+WG LL+AC N++VGERAA+ + L+ ++ V+LSN+YA GK
Sbjct: 623 MIRSMPMKADVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGK 682
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIEL 642
W +R+ + +++ PG S + L
Sbjct: 683 WEDAFLVRRAMQSHRMQRLPGYSGVAL 709
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 235/493 (47%), Gaps = 57/493 (11%)
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
E + L C+ L GKQIHCLV KSG F+ + L+ Y C + +AK +FD
Sbjct: 66 ELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFD 125
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ + +++M+ GYV+ + A ++F +MP K V +T +I G++++ + +A++
Sbjct: 126 VCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQN-ECWNQAVE 184
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
LF+ MR G +PNE T +++ A + G +++HGL+IK FE + L+ Y
Sbjct: 185 LFKQMRNVGV-VPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMY 243
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIK 323
C C + A ++D + + + N ++NG G ++ A ++F R+ + +++ ++I
Sbjct: 244 CVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIID 303
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
GY +++++ M +RS+IS E N V +ISG
Sbjct: 304 GYVRVERINEA-----LMMYRSMISAG--------WEPNDVMMVDLISG----------- 339
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
C ++ +GQ L + +VK F+ ++ ++++ +Y
Sbjct: 340 ------------------------CGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLY 375
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
+ CG IN+A F S NVA+W AL+ GY + + A+ LF M E+D+ ++
Sbjct: 376 AACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVF----SWS 431
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE---AEEFIKDM 560
++S + N +++F M + G+ P V+ + SG L E A E++ +
Sbjct: 432 TMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNN 491
Query: 561 PIELDAVVWGALL 573
I + + A++
Sbjct: 492 SITVSDNLSAAII 504
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 224/479 (46%), Gaps = 56/479 (11%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK--------- 61
++ +E ++VSTN C LV AR LFD+MP + +VSWN ML GYSK
Sbjct: 227 MLFEEFVLVSTNLLRMYC-VCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARV 285
Query: 62 ------------WA----------KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
W + +E+L + +M + + N+ ++S C + +
Sbjct: 286 VFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMA 345
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
+ +G+Q+ V+K G++C++F+ S ++ YA C I EA F ++N W+ ++ G
Sbjct: 346 MTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAG 405
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
YV+ ++ A ++F +MP++DV W+ +ISGY ++ + AL+LF M SG PNE
Sbjct: 406 YVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQN-EQPNLALELFHKMVASGIK-PNEV 463
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T SV+ A A G EG+ H + +++ A+I+ Y C + + A+ V+ +
Sbjct: 464 TMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEI 523
Query: 280 ENPCLNAS--NSLINGLISMGRIEDAELIFN----RLTEANSISYNSMIKGYAVYGQVDD 333
S N++I GL G + IF+ R + N+I++ ++ G V+
Sbjct: 524 REKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVGLVES 583
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
KR F +S+ + S+ P+++ + M+ + E+A ++ +R +
Sbjct: 584 GKRHF--------MSMKSEHSIDPDIKH----YGCMVDLLGRAGRLEEAEEM---IRSMP 628
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ + L AC G++ G+ +L + S+ L +MY+ G DA
Sbjct: 629 MKADVVIWGTLLAACRTHGNVDVGERAAENLARLE-PSHGASRVLLSNMYADAGKWEDA 686
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 218/663 (32%), Positives = 338/663 (50%), Gaps = 62/663 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G LV A +F +M R + SWN ++ GY+K FDE+L+L M ++ + TF
Sbjct: 141 RFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPC 200
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C L L G+++H V++ G+E V + L+ Y C +I A+ VFD + +
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRD 260
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ GY + D C + L+LF MR
Sbjct: 261 RISWNAMISGYFEN--------------------------------DVCLEGLRLFFMMR 288
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E + P+ T SVI AC LG G+ VHG +IK GF + S+ +LI+ + +
Sbjct: 289 EFFVD-PDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCW 347
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGY 325
D A V+ ++E L + ++I+G G E A + + + I+ S++
Sbjct: 348 DEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSAC 407
Query: 326 AVYGQVDDSKRLFEKMPHRS----IISLNTMISV----------------IPEMERNPVT 365
A G +D L E +I N++I + IP +N ++
Sbjct: 408 AGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP--NKNVIS 465
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
W S+I G N +AL + M L++ T + AC+ +G+L G+ +HAH +
Sbjct: 466 WTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHAL 524
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+T + ++ +L+DMY RCG + A F+S +VA+W L+ GY+ G G AV
Sbjct: 525 RTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVE 583
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLL 544
LF M+E D+ P+ TF +L AC R+G+V +G++ F SM+ + + P L+HY VVDLL
Sbjct: 584 LFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLL 643
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L +A EFIK MPI+ D +WGALL+AC + N+E+GE AAQ +F +D K + Y+
Sbjct: 644 GRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYI 703
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+L N+YA GKW + +RK + + DPGCSW+E+ +VHAF D +P I A
Sbjct: 704 LLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINA 763
Query: 665 TLE 667
LE
Sbjct: 764 VLE 766
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 235/535 (43%), Gaps = 58/535 (10%)
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
+++L + +M V + E T+ +L +C + +G ++H V K+ +G
Sbjct: 73 GDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLG 132
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ LL + ++ EA VF ++ E + W++++ GY + +A +++ +M
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRM------ 186
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
+W + P+ YTF V+R C L G+ VH
Sbjct: 187 LWVGI---------------------------RPDVYTFPCVLRTCGGLPDLARGREVHL 219
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR-IE 301
+I+ GFE D + ALI Y C A V+DR+ + N++I+G +E
Sbjct: 220 HVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLE 279
Query: 302 DAELIF---NRLTEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIIS 348
L F + + ++ S+I G V+G V + + E + S+I
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQ 339
Query: 349 LNTMISVIPEME--------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+++ + E E ++ V+W +MISGY +N L EKA++ Y M + T
Sbjct: 340 MHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEIT 399
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ + AC+ LG L +G +LH +T S V V SL+DMYS+C I+ A F I
Sbjct: 400 IASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP 459
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ NV +WT+++ G + EA+ F+ M+ + PN+ T V VLSAC R G ++ G +
Sbjct: 460 NKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKE 518
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
I G+ ++D+ R G + A E D W LL+
Sbjct: 519 IHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS--CEKDVASWNILLTG 571
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 207/481 (43%), Gaps = 55/481 (11%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + N IT + G + +AR +FD+MP R +SWN M+ GY + E L L
Sbjct: 227 ESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFM 286
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M V + T ++++S C L G+++H V+K+G+ V + L+ +++
Sbjct: 287 MREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGC 346
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+EA+ VF ++ + + W+ M+ GY + L A + + M + VV
Sbjct: 347 WDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVV------------ 394
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
P+E T SV+ ACA LG +G ++H + G
Sbjct: 395 ---------------------PDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI 433
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT--- 311
+ +LI+ Y C D A+ V+ R+ N + + S+I GL R +A F ++
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSL 493
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRL----------FEKMPHRSIISLNTMISVIPEM-- 359
+ NS++ S++ A G + K + F+ +++ + +
Sbjct: 494 KPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN 553
Query: 360 -----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
E++ +WN +++GY Q A++L+ M + ++ TF+ L ACS G +
Sbjct: 554 QFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMV 613
Query: 415 QQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMN 472
G + + K N+ S+VD+ R G + DA + P+ A W AL+N
Sbjct: 614 TDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLN 673
Query: 473 G 473
Sbjct: 674 A 674
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 4/215 (1%)
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
+NP NS+I EKAL +M++L + T+ L C + +G +
Sbjct: 60 QNP---NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRV 116
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H+++ KT V +G +L+ M+ R G + +A F ++ ++ +W L+ GY+ G
Sbjct: 117 HSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYF 176
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
EA+ L+ ML I P+ TF VL C + G ++ + YG ++ +
Sbjct: 177 DEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNAL 236
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + + G + A MP D + W A++S
Sbjct: 237 ITMYVKCGDIFSARLVFDRMP-RRDRISWNAMISG 270
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 200/627 (31%), Positives = 339/627 (54%), Gaps = 31/627 (4%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK--FDESLSLVSTMH 76
+S +T NG + AR +F++MP RT S+N M+ Y++ E+ L + M
Sbjct: 63 ISWTAMLTAYYENGHIAKARKMFEKMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMR 122
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS-GLLFFYANCFEI 135
N +++ +++ A+ + + ++++ L++ E + V S L+ Y +
Sbjct: 123 ERN----SISYAAMITGLARAGMVDNAEELY---LETPVEWRDPVCSNALISGYLKVGRL 175
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
EEA R+F+ + E + + WS M+ GY + + A ++F +MP+++VV WT +I G+ K
Sbjct: 176 EEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKM- 234
Query: 196 DGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
GC E LF MR+ G N T + AC+ G + EG +HGL+ + GFEFD
Sbjct: 235 -GCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVF 293
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+G A+I YC A +++D + + + N+LI G + +E+ ++F + + +
Sbjct: 294 LGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKD 353
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
IS+ +MI G++ G++ S LF MP +++ + W ++ISG+V
Sbjct: 354 VISWTTMITGFSNKGKMGKSIELFRMMP-----------------KQDDIAWTAVISGFV 396
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
N +E+A+ ++ M + + T S + A + L +L QG +H +VK E ++
Sbjct: 397 GNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLS 456
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+ SLV MY++CG++ D F+SI+SPN+ ++ +++ G++ +G G EA+ LF ML +
Sbjct: 457 IQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEG 516
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEA 553
PN TF+GVLSAC GL+ +G F+SMKS Y + P HY C+VDLLGR+G L +A
Sbjct: 517 QKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDA 576
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
+ I+ MP E + VWGALL A + ++V + AAQ++F L+ + Y +LS +Y+
Sbjct: 577 IDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSA 636
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWI 640
G+ +R VKK G SWI
Sbjct: 637 GRNRDSEQVRMAQGLKGVKKSAGYSWI 663
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 157/343 (45%), Gaps = 29/343 (8%)
Query: 298 GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS--- 354
G +++AE IF+R+ N+IS+ +M+ Y G + ++++FEKMP R+ S N MI+
Sbjct: 45 GDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTASYNAMITAYT 104
Query: 355 ------------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
+ EM ERN +++ +MI+G + + + A +LY+ D S
Sbjct: 105 RSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAEELYLETPVEWRDPVCSNA 164
Query: 402 SVLFHACSCLGSLQQGQLLHA-HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ G L+ G+L A + + E +V +S+VD Y + G I A+ F +
Sbjct: 165 LI-------SGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMP 217
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP-NAATFVGVLSACVRAGLVNEGM 519
NV WTA+++G+ G LF M ++ V N T + AC G EG+
Sbjct: 218 ERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGI 277
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
++ + G + ++ + R + EA + I DM D V W AL++ +
Sbjct: 278 QMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARK-IFDMMNRKDVVSWNALIAG--YV 334
Query: 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
N EV E +K + ++ + ++ GK GK +++
Sbjct: 335 QNDEV-EEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIEL 376
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLV 72
TQ+ ++S IT G++ + LF MP + ++W ++ G+ +++E++
Sbjct: 349 TQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWF 408
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M R V+ N T S++LS A L +L G QIH LV+K G E + + L+ Y C
Sbjct: 409 IEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKC 468
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
+ + ++F ++ N + ++ M+ G+ Q +G+
Sbjct: 469 GNVADGHQIFTSINSPNIVSFNSMITGFAQ--------------------------NGFG 502
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
E+AL+LF M G+ PNE TF V+ AC +G +G
Sbjct: 503 ------EEALELFHKMLNEGQK-PNEITFLGVLSACTHVGLLEQG 540
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 218/714 (30%), Positives = 356/714 (49%), Gaps = 64/714 (8%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +++ N + + G L A LF +MP R V SWNT++ GY + +F +L + +
Sbjct: 89 EPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVS 148
Query: 75 MHRSNVKL-NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M ++ L N TF ++ C L Q+ L+ K + V + L+ C
Sbjct: 149 MRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCG 208
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++ A + F + + + MLVGY + + + A ++F MP++DVV W +IS +K
Sbjct: 209 AMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSK 268
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
S +AL + M G P+ T+ S + ACARL + GK +H +I+ D
Sbjct: 269 S-GRVREALDMVVDMHGKGVR-PDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDP 326
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL--- 310
+ A++E Y C F A RV+ L + + LI G + G ++ +FN++
Sbjct: 327 YVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAE 386
Query: 311 -------------------------------------TEANSISYNSMIKGYAVYGQVDD 333
T A +S NS+I YA G + +
Sbjct: 387 LMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVS-NSLISMYAKCGNLQN 445
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNSMISGYVQNNLH 379
++ +F M R I+S MI+ ++ RN +TWN+M+ Y+Q+
Sbjct: 446 AELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAE 505
Query: 380 EKALQLY---MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
E L++Y +T + + D T+ LF C+ +G+ + G + H VK + V
Sbjct: 506 EDGLKMYSDMLTEKDVIPDWV--TYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVV 563
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+++ MYS+CG I++A+ +F +S ++ +W A++ GYS HG+G +A+ +F+ +L +
Sbjct: 564 NAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAK 623
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P+ ++V VLS C +GLV EG F MK + + P LEH++C+VDLLGR+GHL EA+
Sbjct: 624 PDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKN 683
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
I +MP++ A VWGALLSAC N ++ E AA+ +F LD Y++L+ +YA GK
Sbjct: 684 LIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGK 743
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+RK + +KK PG SW+E+N+RVH F ED ++P I L+ L
Sbjct: 744 SDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDEL 797
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/571 (22%), Positives = 245/571 (42%), Gaps = 88/571 (15%)
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF-DELHEDN 149
L C ++L + +H ++ G F+ + LL Y +C + +A+ + DE+ E N
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ ++M+ GY + +SDA ++F +MP +DV W ++SGY +S AL +F MR
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLN-ALDIFVSMR 150
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
++G+++PN +TF V+++C LG + GLL K + D + AL++ C A
Sbjct: 151 QTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAM 210
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
D A + + R++NP + NS++ G ++ A IF + E + +S+N +I + G
Sbjct: 211 DFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSG 270
Query: 330 QVDDS---------------------------------------KRLFEKMPHRSIISLN 350
+V ++ ++ +PH +
Sbjct: 271 RVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVAS 330
Query: 351 TMISVIPE--------------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
M+ + + +RN V+W +I G++Q ++++L+ MR +
Sbjct: 331 AMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAV 390
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ--- 453
+ + L C + G LH+ +K+ V V SL+ MY++CG++ +A+
Sbjct: 391 DQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIF 450
Query: 454 ----------------------------ASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
F +S+ NV W A++ Y HG + +
Sbjct: 451 NFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLK 510
Query: 486 LFEIML-EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
++ ML E+D++P+ T+V + C G G +I G++ V+ +
Sbjct: 511 MYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMY 570
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G + EA + D D V W A+++
Sbjct: 571 SKCGRISEARKAF-DFLSRKDLVSWNAMITG 600
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 197/649 (30%), Positives = 351/649 (54%), Gaps = 24/649 (3%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +FD+ P++ WNT++ + +++++L L M ++ K + T +L C +
Sbjct: 185 ANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGK 244
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L +L +GKQIH V++ G + + ++ Y+ +E A+ VFD + N W+ +
Sbjct: 245 LRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSI 304
Query: 157 LVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
+ Y ++ A+D+F +M K D++ W L+SG+ E L R ++ +G
Sbjct: 305 ISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQ-GSYENVLTNIRSLQSAG 363
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
P+ + S ++A LG F GK +HG +++ E+D + +L++ Y + + A
Sbjct: 364 FK-PDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKA 422
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVY 328
V+ +N + A NSLI+G G ++AE + ++ E A+ +++NS++ GY++
Sbjct: 423 EVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMS 482
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G +++ ++I+ + + P N V+W +MISG QN + ALQ +
Sbjct: 483 GCSEEA---------LAVINRIKSLGLTP----NVVSWTAMISGCCQNENYTDALQFFSQ 529
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M++ + +T S L AC+ L++G+ +H +K F ++Y+ T+L+DMYS+ G
Sbjct: 530 MQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGK 589
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+ A F +I + W +M GY+ +G G E LF+ M + I P+A TF +LS
Sbjct: 590 LKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSG 649
Query: 509 CVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C +GLV +G K F SMK+ Y + PT+EHY+C+VDLLG++G L EA +FI MP + DA
Sbjct: 650 CKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADAS 709
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
+WGA+L+AC ++++ E AA+ +F L+ + YV++ NIY+ +WG +++ +T
Sbjct: 710 IWGAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMT 769
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ VK SWI++ +H FS E +++P IY L L + + +
Sbjct: 770 AMGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKL 818
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/549 (23%), Positives = 235/549 (42%), Gaps = 81/549 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA-KFDESLSLVSTMHRSNVKLNETTFSTI 90
G +A +F R + WN+ L ++ + E L + +H VK + + +
Sbjct: 78 GDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVV 137
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L +C L L G ++H +LK G++ + L+ Y C I+ A +VFDE +
Sbjct: 138 LKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQED 197
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
LW+ +++ ++ DA ++ +M S AK+ DG
Sbjct: 198 FLWNTIVMANLRSERWEDALELSRRMQ-----------SASAKATDG------------- 233
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
T +++AC +L A EGK +HG +I+ G + SI +++ Y +
Sbjct: 234 ---------TIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLE 284
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
A V+D E + N S+NS+I YAV G
Sbjct: 285 LARAVFDSTE-------------------------------DHNLASWNSIISSYAVNGC 313
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
++ + LF +M SI + + +TWNS++SG++ +E L +++
Sbjct: 314 LNGAWDLFREMESSSI-------------KPDIITWNSLLSGHLLQGSYENVLTNIRSLQ 360
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+ + A LG G+ +H +++++ E +VYV TSLVDMY + +
Sbjct: 361 SAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLE 420
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A+ F + N+ AW +L++GY++ GL A L M E+ I + T+ ++S
Sbjct: 421 KAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYS 480
Query: 511 RAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP---IELDAV 567
+G E + + +KS G+ P + +T ++ ++ + +A +F M ++ ++
Sbjct: 481 MSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNST 540
Query: 568 VWGALLSAC 576
LL AC
Sbjct: 541 TISTLLRAC 549
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 102/258 (39%), Gaps = 21/258 (8%)
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ--NN 377
SM++ Y +G + + ++F RN + WNS + + +
Sbjct: 69 SMMRNYLEFGDFESATKVF-----------------FVGFARNYLLWNSFLEEFASFGGD 111
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
HE L+++ + + +V+ C L L G +HA L+K F+ +V++
Sbjct: 112 SHE-ILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSC 170
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+L+++Y +C I+ A F W ++ +A+ L M
Sbjct: 171 ALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKA 230
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
T V +L AC + +NEG +I + +G V +V + R+ L E +
Sbjct: 231 TDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRL-ELARAV 289
Query: 558 KDMPIELDAVVWGALLSA 575
D + + W +++S+
Sbjct: 290 FDSTEDHNLASWNSIISS 307
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G+L A +F + +T+ WN M+ GY+ + +E +L M ++ ++ + TF+
Sbjct: 586 KGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTA 645
Query: 90 ILSVCAQLNSLIDG 103
+LS C ++DG
Sbjct: 646 LLSGCKNSGLVMDG 659
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESN-VYVGTSLVDMYSRCGSINDAQASFSSI 459
FS FH + +L + LHA ++K P + N V + S++ Y G A F
Sbjct: 31 FSPFFHPLGGIRTLNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVG 90
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVL-LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ N W + + ++ G S +L +F+ + ++ + ++ VL C+ + G
Sbjct: 91 FARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLG 150
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
M++ + G + +++L + + A + + P++ D +W ++ A
Sbjct: 151 MEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQED-FLWNTIVMA 206
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 215/714 (30%), Positives = 357/714 (50%), Gaps = 64/714 (8%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +++ N + + G L A LF +MP R V SWNT++ GY + +F +++ +
Sbjct: 92 EPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVS 151
Query: 75 MHRSNVKL-NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M RS L N TF + C L Q+ L+ K G++ V +G++ + C
Sbjct: 152 MRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG 211
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++ A + F ++ + ML GY + + A ++F MP++DVV W ++S ++
Sbjct: 212 AVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQ 271
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
S E AL + M G + + T+ S + ACA+L + GK +H +I+ D
Sbjct: 272 SGRARE-ALSVAVDMHNRGVRL-DSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDP 329
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL--- 310
+ A++E Y C F A RV+ L + + LI G + G ++ +FN++
Sbjct: 330 YVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAE 389
Query: 311 -------------------------------------TEANSISYNSMIKGYAVYGQVDD 333
T A IS NS+I YA G + +
Sbjct: 390 LMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVIS-NSLISMYAKCGNLQN 448
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNSMISGYVQNNLH 379
++ +F M R I+S M++ ++ RN +TWN+M+ Y+Q+
Sbjct: 449 AESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAE 508
Query: 380 EKALQLY---MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
E L++Y +T + + D T+ LF C+ +G+ + G + H VK + V
Sbjct: 509 EDGLKMYSAMLTEKDVIPDWV--TYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVM 566
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+++ MYS+CG I++A+ F +S ++ +W A++ GYS HG+G +A+ +F+ ML++
Sbjct: 567 NAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAK 626
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P+ ++V VLS+C +GLV EG F +K + V P LEH++C+VDLL R+G+L EA+
Sbjct: 627 PDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKN 686
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
I +MP++ A VWGALLSAC N E+ E AA+ +F LD Y++L+ IYA GK
Sbjct: 687 LIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGK 746
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+RK + +KK+PG SW+E+ ++VH F ED ++P I L+ L
Sbjct: 747 SVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDEL 800
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 224/474 (47%), Gaps = 59/474 (12%)
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF-DELHEDNELLWSLMLVGYVQCNL 165
H ++ G F+ + LL Y +C + +A+ + ++ E N + ++M+ GY +
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
+SDA ++F +MP++DV W L+SGY +S + A++ F MR SG+++PN +TF +
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLD-AMESFVSMRRSGDSLPNAFTFGCAM 169
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
++C LG + GLL K GF+ D + +++ + C A D A + + ++E P
Sbjct: 170 KSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPT-- 227
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
+F R NSM+ GYA VD + LFE MP
Sbjct: 228 --------------------VFCR---------NSMLAGYAKSYGVDHALELFESMP--- 255
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
ER+ V+WN M+S Q+ +AL + + M + +T++
Sbjct: 256 --------------ERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSL 301
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
AC+ L SL G+ LHA ++++ + YV +++V++Y++CG +A+ FSS+ N
Sbjct: 302 TACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTV 361
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
+WT L+ G+ +G SE++ LF M + + + ++S C M + R +
Sbjct: 362 SWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSN----RMDMCLARQL 417
Query: 526 KSY----GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
S G + ++ + + G+L AE M E D V W +L+A
Sbjct: 418 HSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSME-ERDIVSWTGMLTA 470
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 8/231 (3%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+E IVS +T + G + AR FD M R V++WN ML Y + ++ L + S
Sbjct: 457 EERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYS 516
Query: 74 TM-HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M +V + T+ T+ CA + + G QI +K G V + ++ Y+ C
Sbjct: 517 AMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKC 576
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLI 188
I EA+++FD L + + W+ M+ GY Q + A ++F M KK D + + ++
Sbjct: 577 GRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVL 636
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGK 238
S + S G + K + M + N+ P F ++ AR G E K
Sbjct: 637 SSCSHS--GLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAK 685
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 198/675 (29%), Positives = 348/675 (51%), Gaps = 56/675 (8%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M E +V+ + + + +L A +F +MP R +V W+ ++ GY + +F E L L
Sbjct: 167 MGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKL 226
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M + + ++++T++++ CA L++ G Q+H LKS + +G+ L YA
Sbjct: 227 FKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAK 286
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C +R+FD A+ VF +P + +I GY
Sbjct: 287 C------ERMFD-------------------------AWKVFNTLPNPPRQSYNAIIVGY 315
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
A+ G KAL +F+ ++ + +E + + AC+ + EG +HGL +KCG F
Sbjct: 316 ARQDQGL-KALDIFQSLQRNNLGF-DEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGF 373
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL- 310
+ + +++ Y C A A +++ +E + N++I I +F +
Sbjct: 374 NICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSML 433
Query: 311 ---TEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
E + +Y S++K G ++G++ S + +++ + ++
Sbjct: 434 RSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLM 493
Query: 358 EMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
E E+ V+WNS+ISG+ E A + + M ++ I T++ + C+
Sbjct: 494 EAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCA 553
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+ +++ G+ +HA ++K S+VY+ ++LVDMYS+CG++ D++ F + W+A
Sbjct: 554 NMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSA 613
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-Y 528
++ Y++HGLG +A+ LFE M ++ PN F+ VL AC G V++G+ F+ M S Y
Sbjct: 614 MICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHY 673
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P +EHY+C+VDLLGRSG ++EA + I+ MP E D V+W LLS C N+EV E+A
Sbjct: 674 GLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKA 733
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
+ LD + SAYV+L+N+YA++G WG+ +R + + ++KK+PGCSWIE+ VH
Sbjct: 734 FNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHT 793
Query: 649 FSVEDRNNPNCNVIY 663
F V D+ +P IY
Sbjct: 794 FLVGDKAHPRSEEIY 808
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 158/626 (25%), Positives = 291/626 (46%), Gaps = 93/626 (14%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-------------- 75
++ ++ A +FD+MP R V+SWNT++ GY+ + SL +M
Sbjct: 53 KSSKMNYAFKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSC 112
Query: 76 ------HRSNVKL-----------NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF 118
+R ++++ + TF+ IL C+ + G Q+HCL ++ G+E
Sbjct: 113 YLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFEND 172
Query: 119 EFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK 178
GS L+ Y+ C ++++A RVF E+ E N + WS ++ GYVQ D FI
Sbjct: 173 VVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQN-------DRFI---- 221
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+ LKLF+ M + G + ++ T+ SV R+CA L AF G
Sbjct: 222 ---------------------EGLKLFKDMLKVGMGV-SQSTYASVFRSCAGLSAFKLGT 259
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+HG +K F +D IG A ++ Y CE A +V++ L NP + N++I G
Sbjct: 260 QLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQD 319
Query: 299 R----------IEDAELIFNRLTEANSISYNSMIK----GYAVYGQVDDSKRLFEKMPHR 344
+ ++ L F+ ++ + +++ S+IK G ++G F
Sbjct: 320 QGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVAN 379
Query: 345 SII-------SLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+I+ +L + EME R+ V+WN++I+ + QN K L L+++M + ++
Sbjct: 380 TILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEP 439
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
T+ + AC+ +L G +H ++K+ + +VG++LVDMY +CG + +A+
Sbjct: 440 DDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIH 499
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+ + +W ++++G+S A F MLE I+P+ T+ VL C +
Sbjct: 500 ARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIE 559
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
G +I + + + + +VD+ + G++ ++ + P + D V W A++ A
Sbjct: 560 LGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP-KRDYVTWSAMICA- 617
Query: 577 WFWMNMEVGERAA---QKMFGLDKKP 599
+ +GE+A ++M L+ KP
Sbjct: 618 --YAYHGLGEKAINLFEEMQLLNVKP 641
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 141/539 (26%), Positives = 252/539 (46%), Gaps = 31/539 (5%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TFS IL C+ L +L GKQ+H ++ +G+ +V + LL FY ++ A +VFD +
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ + + W+ ++ GY M A +F MP++DVV W L+S Y + K++++F
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVN-RKSIEIF 126
Query: 206 RWMRESGENMPNEY-TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
MR +P++Y TF +++AC+ + + G VH L I+ GFE D G AL++ Y
Sbjct: 127 VRMRSL--KIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR-IEDAELIFNRLTEANSIS---YNS 320
C+ D A RV+ + L +++I G + R IE +L + L +S Y S
Sbjct: 185 KCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244
Query: 321 MIK---GYAVY--GQVDDSKRLFEKMPHRSIISLNTM---------------ISVIPEME 360
+ + G + + G L + SII T+ + +P
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPP 304
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
R ++N++I GY + + KAL ++ ++++ + + S ACS + +G L
Sbjct: 305 RQ--SYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQL 362
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H VK N+ V +++DMY +CG++ +A F + + +W A++ + +
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEI 422
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
+ + LF ML + P+ T+ V+ AC +N G +I + G+ + +
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSAL 482
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
VD+ G+ G L EAE+ + E V W +++S E +R +M + P
Sbjct: 483 VDMYGKCGMLMEAEKIHARLE-EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIP 540
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 199/415 (47%), Gaps = 54/415 (13%)
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
N + TF +++ C+ L A GK VH +I GF + L++FYC + A
Sbjct: 2 NPTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAF 61
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
+V+DR+ + + N+LI G +G + A+ +F+ + E + +S+NS++ Y G
Sbjct: 62 KVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRK 121
Query: 334 SKRLFEKM-----PHR----SII------------------------------------- 347
S +F +M PH ++I
Sbjct: 122 SIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVD 181
Query: 348 ------SLNTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
L+ V EM ERN V W+++I+GYVQN+ + L+L+ M K+ + ++ST
Sbjct: 182 MYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQST 241
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
++ +F +C+ L + + G LH H +K+ F + +GT+ +DMY++C + DA F+++
Sbjct: 242 YASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLP 301
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+P ++ A++ GY+ G +A+ +F+ + ++ + + G L+AC EG++
Sbjct: 302 NPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQ 361
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G+ + ++D+ G+ G L EA ++M DAV W A+++A
Sbjct: 362 LHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEME-RRDAVSWNAIIAA 415
>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
Length = 1305
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 199/655 (30%), Positives = 352/655 (53%), Gaps = 24/655 (3%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
GR L A +FD+MP R ++WN ++ + +++++ L M S K ++T
Sbjct: 571 GRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMV 630
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L VC+ G+QIH VL+ G+E + + L+ Y+ ++E +++VF+ + +
Sbjct: 631 KLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDR 690
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEKALKL 204
N W+ ++ Y + + DA + +M K D+V W L+SGYA S A+ +
Sbjct: 691 NLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYA-SKALSRDAIAV 749
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
+ ++ +G PN + S+++A G GK +HG +I+ +D + LI+ Y
Sbjct: 750 LKRIQIAGLK-PNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYI 808
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNS 320
A V+D ++ + A NSLI+GL G +++AE + +R+ ++N++++NS
Sbjct: 809 KTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNS 868
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
++ GYA +G+ + + + KM + E N V+W +++SG +N
Sbjct: 869 LVSGYATWGKTEKALAVVGKMKKNGV-------------EPNVVSWTAILSGCSKNGNFG 915
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
L++++ M++ + +T S L CL L G+ +H+ +K + +V T+LV
Sbjct: 916 NGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALV 975
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
DMY++ G + A F I + +A+W ++ GY+ G E + +F MLE I P+A
Sbjct: 976 DMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAI 1035
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
TF VLS C +GLV EG K F M+S YGV+PT+EH +C+V+LLGRSG+L EA +FI+
Sbjct: 1036 TFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMVELLGRSGYLDEAWDFIRT 1095
Query: 560 MPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKK 619
MP++ DA +WGA LS+C ++E+ E A +++ L+ + Y+++ N+Y+ L +WG
Sbjct: 1096 MPLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWGDV 1155
Query: 620 MDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
IR +++ V+ SWI+++ VH F E + +P+ IY L L + +
Sbjct: 1156 ERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAHPDEGEIYFELYKLVSEMK 1210
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 224/514 (43%), Gaps = 95/514 (18%)
Query: 47 RTVVSWNTML-----CGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLI 101
R VSW L G K+ +E + L V +E + + +CA L
Sbjct: 486 RNQVSWRDFLEKAEDFGVEKYKVLEEFVRL----QNKGVNFDEVVLAMVFRICAVLMYRF 541
Query: 102 DGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
G IH ++K G + + V S L+ FY C ++ A ++FDE
Sbjct: 542 LGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDE---------------- 585
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
MPK+D + W +++ +S EKA+KLFR MR SG + T
Sbjct: 586 ---------------MPKRDDLAWNEIVMVNLQS-GNWEKAVKLFRVMRFSGAKAYDS-T 628
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
+++ C+ F +G+ +HG +++ GFE + S+ +LI Y + + +V++ +
Sbjct: 629 MVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMV 688
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKR 336
+ L++ NS+++ +G ++DA + + + + + +++NS++ GYA D+
Sbjct: 689 DRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDA-- 746
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
I+V+ ++ I+G N
Sbjct: 747 ----------------IAVLKRIQ---------IAGLKPNT------------------- 762
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
S+ S L A G ++ G+ +H ++++ +VYV T+L+DMY + G + A+ F
Sbjct: 763 --SSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVF 820
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+ N+ AW +L++G S+ GL EA L M ++ I NA T+ ++S G
Sbjct: 821 DMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTE 880
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
+ + + MK GV P + +T ++ ++G+
Sbjct: 881 KALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNF 914
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 171/416 (41%), Gaps = 86/416 (20%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I RNG+L ++R +F+ M R + SWN+++ Y++ D+++ L+ M +K
Sbjct: 665 NSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLK 724
Query: 82 LNETTFSTILSVCA-------------------------QLNSLID----------GKQI 106
+ T++++LS A ++SL+ GK I
Sbjct: 725 PDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAI 784
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H V+++ +V + L+ Y + A+ VFD + E N + W+ ++ G L+
Sbjct: 785 HGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLL 844
Query: 167 SDAFDVFIKMPKKDV----VVWTKLISGYAK----------------------------S 194
+A + +M K+ + V W L+SGYA
Sbjct: 845 KEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAI 904
Query: 195 VDGCEK------ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
+ GC K LK+F M+E G + PN T S++R L GK VH +K
Sbjct: 905 LSGCSKNGNFGNGLKIFLKMQEEGVS-PNSATISSLLRILGCLSLLYSGKEVHSFCLKNN 963
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
D + AL++ Y A ++ ++N L + N +I G R E+ +FN
Sbjct: 964 LTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFN 1023
Query: 309 RLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
+ EA ++I++ S++ G V + + F+ M + VIP +E
Sbjct: 1024 AMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLM--------RSHYGVIPTIE 1071
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 92/217 (42%), Gaps = 3/217 (1%)
Query: 361 RNPVTWNSMISGYVQNNLHE-KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
RN V+W + + + K L+ ++ ++ ++ +++F C+ L G
Sbjct: 486 RNQVSWRDFLEKAEDFGVEKYKVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFLGFT 545
Query: 420 LHAHLVKTPFE-SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H L+K + S+ V ++L+ Y RC S++ A F + + AW ++ G
Sbjct: 546 IHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSG 605
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
+AV LF +M +T V +L C +G +I + G +
Sbjct: 606 NWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCN 665
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ + R+G L + + M ++ + W +++S+
Sbjct: 666 SLIVMYSRNGKLESSRKVFNSM-VDRNLSSWNSIVSS 701
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 207/655 (31%), Positives = 332/655 (50%), Gaps = 56/655 (8%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
+F +P+RT V+WNT++ GY++ +L L M V+ + ++ +S C+ L
Sbjct: 177 VFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGF 236
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
L G+QIH +S E V + L+ Y C + A+++FD
Sbjct: 237 LEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFD---------------- 280
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
C M +++V WT +ISGY ++ E A+ +F M ++G P+ +
Sbjct: 281 ---C------------MEYRNLVSWTTMISGYMQNSFNAE-AITMFWNMTQAGWQ-PDGF 323
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
S++ +C L A +G+ +H +IK E DE + ALI+ Y CE A V+D L
Sbjct: 324 ACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDAL 383
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIK----------GY 325
+ N++I G + +A IF R+ + +++ S++
Sbjct: 384 AEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSK 443
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQNN 377
++G + S + ++I + + S++ + + ++ V WNSMI G+ QN
Sbjct: 444 QIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNE 503
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
E+A++L+ + + TF L S L S+ GQ HA ++K +++ +V
Sbjct: 504 QGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSN 563
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+L+DMY++CG I + + F S +V W +++ Y+ HG EA+ +F +M E ++ P
Sbjct: 564 ALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEP 623
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
N TFVGVLSAC AG V EG+ F SMKS Y + P +EHY VV+L GRSG LH A+EF
Sbjct: 624 NYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEF 683
Query: 557 IKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
I+ MPI+ A VW +LLSAC + N E+G AA+ D YV+LSNIYA G W
Sbjct: 684 IERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLW 743
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
++R+++ K+ GCSWIE+ VH F V R +P +IY+ L+ LT+
Sbjct: 744 ADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTS 798
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 232/456 (50%), Gaps = 40/456 (8%)
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK-SVDGCEKALKLFR 206
D+ L +L+L GY + DA +F +MP +++V W +IS Y + D C A+ LF
Sbjct: 51 DDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDC--AISLFV 108
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
+++ +PNE+ SV+RAC + A G+ VHG+ +K + + +G ALI Y
Sbjct: 109 AFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKL 168
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMI 322
D AM V+ L N++I G +G A +F+R+ + S +
Sbjct: 169 GCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAV 228
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNT-MISVIPEM------------------ERNP 363
+ G ++ +++ +RS +T +I+V+ ++ RN
Sbjct: 229 SACSALGFLEGGRQI-HGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNL 287
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
V+W +MISGY+QN+ + +A+ ++ M + + + ++C L ++ QG+ +HAH
Sbjct: 288 VSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAH 347
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
++K E++ YV +L+DMY++C + +A+A F +++ + ++ A++ GYS + +EA
Sbjct: 348 VIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEA 407
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV----PTLEHY-- 537
V +F+ M + P+ TFV +L G+ + + I S + +G++ +L+ Y
Sbjct: 408 VNIFQRMRFFSLRPSLLTFVSLL------GVSSSQLAIELSKQIHGLIIKSGTSLDLYAA 461
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ ++D+ + +++A+ + +M D V+W +++
Sbjct: 462 SALIDVYSKCSLVNDAKT-VFNMLHYKDMVIWNSMI 496
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 69/157 (43%), Gaps = 2/157 (1%)
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+HA ++++ L+ YS G + DA+ F + N+ +W ++++ Y+ HG
Sbjct: 40 IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99
Query: 480 GSEAVLLFEIMLEQDI-VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
A+ LF + VPN VL AC ++ V+ G ++ + + T
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGT 159
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+++L + G + EA +P+ V W +++
Sbjct: 160 ALINLYAKLGCMDEAMLVFHALPVR-TPVTWNTVITG 195
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I + G + R LF+ V+ WN+M+ Y++ +E+L + M + V
Sbjct: 562 SNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEV 621
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYE 116
+ N TF +LS CA + +G H +KS Y+
Sbjct: 622 EPNYVTFVGVLSACAHAGFVGEGLN-HFNSMKSNYD 656
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 207/622 (33%), Positives = 328/622 (52%), Gaps = 65/622 (10%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
+ + ++ A+ L GKQ+H L++ +GY F+ + L+ Y+ C E++ A ++F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
D MP++++V WT +ISG +++ E A+
Sbjct: 64 D-------------------------------TMPQRNLVSWTAMISGLSQNSKFSE-AI 91
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
+ F MR GE +P ++ F S IRACA LG+ GK +H L +K G + +G L +
Sbjct: 92 RTFCGMRICGE-VPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDM 150
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASN--SLINGLISMGRIEDAELIFNRL-TEANSISYN 319
Y C A A +V++ E PC + + ++I+G +G E+A L F ++ E +I +
Sbjct: 151 YSKCGAMFDACKVFE--EMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQH 208
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSII------------SLNTMISVIPEME------- 360
+ G + K F + H S++ +L M S +ME
Sbjct: 209 VLCSTLGACGALKACK--FGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFG 266
Query: 361 -----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
RN V++ +I GYV+ EK L +++ +R+ I+ TFS L AC+ +L+
Sbjct: 267 IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALE 326
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
QG LHA ++K F+ + +V + LVDMY +CG + A +F I P AW +L++ +
Sbjct: 327 QGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFG 386
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTL 534
HGLG +A+ +FE M+++ + PNA TF+ +L+ C AGLV EG+ F SM K+YGVVP
Sbjct: 387 QHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGE 446
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY+CV+DLLGR+G L EA+EFI MP E +A W + L AC + E+G+ AA+K+
Sbjct: 447 EHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVK 506
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
L+ K A V+LSNIYA +W +R R+ VKK PG SW+++ + H F ED
Sbjct: 507 LEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDW 566
Query: 655 NNPNCNVIYATLEHLTANLNSV 676
++P + IY L+ L + +
Sbjct: 567 SHPRKSAIYEKLDTLLDQIKAA 588
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 213/487 (43%), Gaps = 66/487 (13%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
TN + + G+L A LFD MP R +VSW M+ G S+ +KF E++ M
Sbjct: 43 TNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGE 102
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ FS+ + CA L S+ GKQ+HCL LK G FVGS L Y+ C + +A +
Sbjct: 103 VPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACK 162
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF+E+ +E+ W+ M+ GY + +A F KM ++V +
Sbjct: 163 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTI----------------- 205
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
+++ S + AC L A G+ VH ++K GFE D +G AL
Sbjct: 206 ----------------DQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALT 249
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLN--ASNSLINGLISMGRIEDAELIFNRL----TEAN 314
+ Y + A V+ +++ C N + LI+G + +IE +F L E N
Sbjct: 250 DMYSKAGDMESASNVFG-IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPN 308
Query: 315 SISYNSMIKGYAVYGQVDDSKRL--------FEKMPHRSII---------SLNTMISVIP 357
+++S+IK A ++ +L F++ P S I L I
Sbjct: 309 EFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFD 368
Query: 358 EM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
E+ + + WNS++S + Q+ L + A++++ M + TF L CS G +++
Sbjct: 369 EIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEE 428
Query: 417 GQLLHAHLVKT----PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
G + KT P E + + ++D+ R G + +A+ + + PN W + +
Sbjct: 429 GLDYFYSMDKTYGVVPGEEHY---SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485
Query: 472 NGYSHHG 478
HG
Sbjct: 486 GACRIHG 492
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 217/696 (31%), Positives = 352/696 (50%), Gaps = 62/696 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNETTFSTI 90
G+L A LF +MP R V SWNT++ GY + ++ SL +MHRS + N TF+
Sbjct: 85 GRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYA 144
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
+ C L Q+ +V K G + V + L+ + C ++ A R+F + E
Sbjct: 145 MKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTI 204
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ MLVGYV+ + A ++F MP++DVV W ++S ++S +AL + M+
Sbjct: 205 FCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS-GRVREALDMVVDMQS 263
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G + + T+ S + ACARL + GK +H +I+ D + AL+E Y C F
Sbjct: 264 KGVRL-DSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFK 322
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----------ANSIS--- 317
A V++ L + A LI G + G ++ +FN++ A IS
Sbjct: 323 EAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCC 382
Query: 318 --------------------------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
NS+I YA + ++ +F M + I+S +
Sbjct: 383 SRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTS 442
Query: 352 MISVIPEM--------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
MI+ ++ +N +TWN+M+ Y+Q+ E L++Y M L+
Sbjct: 443 MITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVM--LSEKDV 500
Query: 398 RS---TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
R T+ LF C+ LG+ + G + VK + V +++ MYS+CG I +A+
Sbjct: 501 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARK 560
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F ++ ++ +W A++ GYS HG+G +A+ +F+ +L++ P+ ++V VLS C +GL
Sbjct: 561 VFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGL 620
Query: 515 VNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V EG F MK + + P LEH++C+VDLLGR+GHL EA++ I +MP++ A VWGALL
Sbjct: 621 VQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALL 680
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
SAC N E+ E AA+ +F LD +Y++++ IYA GK IRK + +KK
Sbjct: 681 SACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKK 740
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+PG SW+E+N++VH F +D ++P I L+ L
Sbjct: 741 NPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDEL 776
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 237/509 (46%), Gaps = 56/509 (11%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF-DE 144
F+ L C +L + +H ++ G F+ + LL Y +C + +A+R+ +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ N + ++ML GYV+ +SDA ++F +MP +DV W L+SGY +S +L+
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLA-SLES 124
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F M SG++ PN +TF +++C LG + G++ K G + D + AL++ +
Sbjct: 125 FVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFV 184
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG 324
C D A R++ R++ P + NS++ G + ++ A +F+ + E + +S+N M+
Sbjct: 185 RCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 244
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
+ G+V ++ + ++ +M+ V +S
Sbjct: 245 LSQSGRVREA------------------LDMVVDMQSKGVRLDS---------------- 270
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
+T++ AC+ L SL+ G+ LHA +++ + YV ++LV++Y+
Sbjct: 271 --------------TTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYA 316
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+CG +A+ F+S+ N AWT L+ G+ HG +E+V LF M + + +
Sbjct: 317 KCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALAT 376
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
++S C + G ++ G + + ++ + + +L AE + M E
Sbjct: 377 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMN-EK 435
Query: 565 DAVVWGALLSACWFWMNMEVGERAAQKMF 593
D V W ++++A + +VG A + F
Sbjct: 436 DIVSWTSMITA-----HSQVGNIAKAREF 459
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 145/355 (40%), Gaps = 49/355 (13%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
L + +S E IVS IT + G + AR FD M + V++WN ML Y +
Sbjct: 422 LQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQH 481
Query: 63 AKFDESLSLVSTM-HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
++ L + + M +V+ + T+ T+ CA L + G QI +K G V
Sbjct: 482 GAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSV 541
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+ ++ Y+ C I EA++VFD L+ + + W+ M+ GY Q + A ++F + K+
Sbjct: 542 ANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGA 601
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
P+ ++ +V+ C+ G EGK
Sbjct: 602 ---------------------------------KPDYISYVAVLSGCSHSGLVQEGKSYF 628
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGA---MRVYDRLENPCLNASNSLINGLISMG 298
++ + +I L F C + A D ++ + + + L+S
Sbjct: 629 DMMKRV-----HNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSAC 683
Query: 299 RI----EDAELIFNRLTE---ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
+I E AEL + E +S SY M K YA G+ DDS ++ + M + I
Sbjct: 684 KIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGI 738
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 226/700 (32%), Positives = 354/700 (50%), Gaps = 63/700 (9%)
Query: 3 LYATQSQTL-MTQETLIVSTNKAITECGR--NGQLVTARNLFDQMPIRTVVSWNTMLCGY 59
++ T QT+ + + I +TN ++ R +G L A NLFD+M R V+WNTM+ GY
Sbjct: 18 IFITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGY 77
Query: 60 SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
+ L +M + + TF +IL A L G+Q+H L++K GYE
Sbjct: 78 VNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHV 137
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
+ GS LL YA C + DAF VF +P++
Sbjct: 138 YAGSALLDMYAKCERVR-------------------------------DAFMVFKCIPRR 166
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
+ V W LI+G+ D + A L R M E G + ++ TF ++ +
Sbjct: 167 NSVSWNALIAGFVLEGDH-DTAFWLLRCMEEEGVRL-DDGTFSPLLTLLDEKKFYKLTMQ 224
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD-RLENPCLNASNSLINGLISMG 298
+H +IK G +FD ++ A I Y C + + A RV+D + + L NS++ ++
Sbjct: 225 LHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHD 284
Query: 299 RIEDAELIFNRLT----EANSISYNSMIK-------GYAVYGQVDDSKRLFEKMP----- 342
R E A +F + E + +Y ++I G +++G V KR E++
Sbjct: 285 RKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDNGKSLHGLV--IKRGLEQLVPICNA 342
Query: 343 ------HRSIISLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
S S+ ++V ME ++ V+WNS+++G+ Q E AL+L++ MR +D
Sbjct: 343 VIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVD 402
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
FS + +CS L +LQ GQ +H VK+ FESN +V +SL+ MYS+CG I DA+ S
Sbjct: 403 IDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKS 462
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F + + W ++M Y+ HG G A+ LF M ++ + + TFV L+AC GLV
Sbjct: 463 FEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLV 522
Query: 516 NEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+G + +SM S YG+ P +EHY C VDL GR+G+L EA+ I+ MP + DA+VW LL
Sbjct: 523 EQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLG 582
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
AC ++E+ + A + L+ + YVILSN+Y L +W +K + + + +VKK
Sbjct: 583 ACRACGDIELAAQVASHLLELEPEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKV 642
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
PG SWIE+ + VHAF +DR + + IY LE L ++
Sbjct: 643 PGWSWIEVKNEVHAFIADDRCHSHFEEIYQILEQLMEDIK 682
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 195/476 (40%), Gaps = 103/476 (21%)
Query: 97 LNSLIDGKQ--------IHCLVLKSGYECFEFVGSGLLFFYANCFE--IEEAKRVFDELH 146
LNS+ID + HC +K G + + +L Y C + A +FDE+
Sbjct: 4 LNSVIDSSKHALYNIFITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMS 63
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ + W+ M+ GYV + A++++ K++K F
Sbjct: 64 HRDTVTWNTMISGYVNSGSLGSAWELY--------------------------KSMKSFG 97
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
MP+ YTF S+++ A G+ VH L++K G+E G AL++ Y C
Sbjct: 98 L-------MPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKC 150
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMG-----------------RIEDA------ 303
E A V+ + + N+LI G + G R++D
Sbjct: 151 ERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLL 210
Query: 304 ----ELIFNRLT------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
E F +LT + ++ N+ I Y+ G ++D++R+F+
Sbjct: 211 TLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVG---- 266
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
R+ VTWNSM++ ++ ++ E A +L++ M++ + T++ + A
Sbjct: 267 ------------SRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISA 314
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY--SRCGSINDAQASFSSISSPNVA 465
CS G+ LH ++K E V + +++ MY S S+ DA F S+ S +
Sbjct: 315 CS---HKDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRV 371
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+W +++ G+S G A+ LF M + + F VL +C + G +I
Sbjct: 372 SWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQI 427
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 217/686 (31%), Positives = 347/686 (50%), Gaps = 81/686 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMP--IRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
IV+ ++ +G + A+ LF+ P IR VS+N M+ YS +L+L M
Sbjct: 71 IVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQM 130
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQ-----IHCLVLKSGYECFEFVGSGLLFFYA 130
R + TFS++LS SLI ++ +HC V+K G V + LL Y
Sbjct: 131 KRYGFLPDPFTFSSVLSAL----SLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYV 186
Query: 131 NCFE---------IEEAKRVFDELHEDN--ELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
C + A++VFDE ++ E W+ M+ GYV+ + + A ++ +
Sbjct: 187 CCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYP 246
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA----RLGAFC 235
V W +ISGY + E+A FR M G +EYT+ S+I AC ++G F
Sbjct: 247 IDVAWNAMISGYVRR-GLYEEAFDTFRRMHSMGIQ-EDEYTYTSLISACGSCNEKMGMFN 304
Query: 236 EGKVVHGLLIKCGFE----FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
G+ VHG +++ E F S+ ALI FY YDR+
Sbjct: 305 CGRQVHGYILRTVVEPSHHFVLSVNNALITFYTK----------YDRM------------ 342
Query: 292 NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
IE A +F+++ + IS+N+++ GY +++++ +F +MP
Sbjct: 343 --------IE-ARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMP--------- 384
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
ERN +TW MISG QN E+ L+L+ M+ ++ F+ ACS L
Sbjct: 385 --------ERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVL 436
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
GSL GQ +H+ +++ +S + G +L+ MYSRCG + A++ F ++ + +W A++
Sbjct: 437 GSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMI 496
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGV 530
+ HG G +A+ LFE M+++DI+P+ TF+ +L+AC AGL+ EG F +M YG+
Sbjct: 497 AALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGI 556
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
P +HY ++DLL R+G +A+ IK MP E A +W ALL+ C NME+G +AA
Sbjct: 557 TPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAAD 616
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
++ L Y+ILSN+YA LG+W + +R + VKK+PGCSW+E+ + VH F
Sbjct: 617 RLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFL 676
Query: 651 VEDRNNPNCNVIYATLEHLTANLNSV 676
V+D +P +Y L+ L + +
Sbjct: 677 VDDARHPEVQAVYTYLQQLVNEMKKL 702
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 181/476 (38%), Gaps = 138/476 (28%)
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
+ VH ++ GF+ + I LI YC A +++D++ P + A +L++ S
Sbjct: 24 ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83
Query: 297 MGRIEDAELIFNR--LTEANSISYNSMIKGYA----------------VYGQVDD----- 333
G ++ A+ +FN LT +++SYN+MI Y+ YG + D
Sbjct: 84 SGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFS 143
Query: 334 ----------SKRLFEKMPHRSIISLNTMI------------------------------ 353
+ +M H +I L T++
Sbjct: 144 SVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASA 203
Query: 354 -SVIPEMERNPV---TWNSMISGYVQNN-------------------------------L 378
V E +N + +W +MI+GYV+N+ L
Sbjct: 204 RKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGL 263
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHAC-SC---LGSLQQGQLLHAHLVKTPFESNVY 434
+E+A + M + I T++ L AC SC +G G+ +H ++++T E + +
Sbjct: 264 YEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHH 323
Query: 435 ----VGTSLVDMYSR-------------------------------CGSINDAQASFSSI 459
V +L+ Y++ I +A + FS +
Sbjct: 324 FVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEM 383
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
NV WT +++G + +G G E + LF M + + P F G ++AC G ++ G
Sbjct: 384 PERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQ 443
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+I + G L ++ + R G + AE MP +D+V W A+++A
Sbjct: 444 QIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPY-VDSVSWNAMIAA 498
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 216/688 (31%), Positives = 347/688 (50%), Gaps = 97/688 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS-LVSTMHRSNVKLNETTFSTI 90
G + +R FDQ+ + V +WN+M+ Y + F E++ + + + + TF +
Sbjct: 122 GDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPV 181
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L C +L+DG++IHC V K G++ FV + L+ Y+ + A+ +FD+
Sbjct: 182 LKAC---QTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDD------ 232
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
MP +D+ W +ISG ++ + + AL + MR
Sbjct: 233 -------------------------MPFRDMGSWNAMISGLIQNGNAAQ-ALDVLDEMRL 266
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G NM + T S++ CA+LG ++H +IK G EF+ + ALI Y
Sbjct: 267 EGINM-DSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLG 325
Query: 271 GAMRVYDRLENPCLNASNSLI---------------------NGL-------ISMGRIED 302
A +V+ ++ + + NS+I NGL +S+ I
Sbjct: 326 DAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAA 385
Query: 303 AE-----------LIFNR--LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
I R L EA I N+++ YA G +D + ++F +P + ++S
Sbjct: 386 QSRDYKNSRSVHGFIMRRGWLMEAVVIG-NAVMDMYAKLGVIDSAHKVFNLIPVKDVVS- 443
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL-AIDRTRSTFSVLFHAC 408
WN++ISGY QN L +A+++Y M + I + T+ + A
Sbjct: 444 ----------------WNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAY 487
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ +G+LQQG +H HL+KT +V+VGT L+D+Y +CG + DA F + + W
Sbjct: 488 AHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWN 547
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
A+++ + HG G +A+ LF M ++ + P+ TF+ +LSAC +GLV+EG F M+ Y
Sbjct: 548 AIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEY 607
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P+L+HY C+VDLLGR+G L A +FIKDMP+ DA +WGALL AC N+E+G+ A
Sbjct: 608 GIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFA 667
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
+ ++F +D + + YV+LSNIYA +GKW +R +KK PG S IE+N RV
Sbjct: 668 SDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDI 727
Query: 649 FSVEDRNNPNCNVIYATLEHLTANLNSV 676
F ++++P C IYA L LTA + S+
Sbjct: 728 FYTGNQSHPKCKEIYAELRILTAKMKSL 755
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/539 (22%), Positives = 233/539 (43%), Gaps = 97/539 (17%)
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R K E F+++ C + + K++H L++ SG F+ L+ YA+ ++
Sbjct: 69 RQPAKNEEIDFNSLFDSCTKT---LLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVS 125
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
++ FD++ +KDV W +IS Y ++
Sbjct: 126 LSRGTFDQIQ-------------------------------RKDVYTWNSMISAYVRN-G 153
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
+A+ F + + + YTF V++AC L +G+ +H + K GF++D +
Sbjct: 154 HFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTL---VDGRKIHCWVFKLGFQWDVFVA 210
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN--RLTEAN 314
+LI Y A ++D + + + N++I+GLI G A + + RL N
Sbjct: 211 ASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIN 270
Query: 315 SISY-------------------------------------NSMIKGYAVYGQVDDSKRL 337
S N++I YA +G + D++++
Sbjct: 271 MDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKV 330
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
F++M R ++S WNS+I+ Y QN+ A + M+ ++
Sbjct: 331 FQQMFLRDVVS-----------------WNSIIAAYEQNDDPVTARGFFFKMQLNGLEPD 373
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGSINDAQASF 456
T L + + + +H +++ + V +G +++DMY++ G I+ A F
Sbjct: 374 LLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVF 433
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE-QDIVPNAATFVGVLSACVRAGLV 515
+ I +V +W L++GY+ +GL SEA+ ++ +M E ++I N T+V +L+A G +
Sbjct: 434 NLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGAL 493
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+GM+I + + + TC++DL G+ G L +A +P E +V W A++S
Sbjct: 494 QQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRE-SSVPWNAIIS 551
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 201/474 (42%), Gaps = 58/474 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G + AR+LFD MP R + SWN M+ G + ++L ++ M + ++ T ++
Sbjct: 219 RFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVAS 278
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
IL VCAQL + IH V+K G E FV + L+ YA + +A++VF +
Sbjct: 279 ILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQ----- 333
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
M +DVV W +I+ Y ++ D A F M+
Sbjct: 334 --------------------------MFLRDVVSWNSIIAAYEQNDDPV-TARGFFFKMQ 366
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE-SIGGALIEFYCGCEA 268
+G P+ T S+ A+ + + VHG +++ G+ + IG A+++ Y
Sbjct: 367 LNGLE-PDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGV 425
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYN-----SMIK 323
D A +V++ + + + N+LI+G G +A ++ + E I N S++
Sbjct: 426 IDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILA 485
Query: 324 GYAVYGQVDDSKR----LFEKMPHRSIISLNTMISVIPEMER--------------NPVT 365
YA G + R L + H + +I + + R + V
Sbjct: 486 AYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVP 545
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WN++IS + + EKAL+L+ M+ + TF L ACS G + +G+ +
Sbjct: 546 WNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQ 605
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
+ + ++ +VD+ R G + A + P+ + W AL+ HG
Sbjct: 606 EYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHG 659
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 171/391 (43%), Gaps = 68/391 (17%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N + + G + +A +F+ +P++ VVSWNT++ GY++ E++ + M
Sbjct: 410 VVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEE 469
Query: 78 -SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+KLN+ T+ +IL+ A + +L G +IH ++K+ FVG+ L+ Y
Sbjct: 470 CREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYG------ 523
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+C + DA +F ++P++ V W +IS +
Sbjct: 524 -------------------------KCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGH 558
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
G EKALKLFR M++ G P+ TF S++ AC+ G EGK L+ + G +
Sbjct: 559 G-EKALKLFREMQDEGVK-PDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHY 616
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM----GRIEDAELIFNRLTE 312
G +++ + A YD +++ L+ S+ L+ G IE + +RL E
Sbjct: 617 GCMVDLLGRAGFLEMA---YDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFE 673
Query: 313 ANS--ISYNSMIKG-YAVYGQ---VDDSKRL-----FEKMPHRSIISLNTMISVIPEMER 361
+S + Y ++ YA G+ VD + L +K P S I +N + +
Sbjct: 674 VDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIF----- 728
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
Y N H K ++Y +R L
Sbjct: 729 -----------YTGNQSHPKCKEIYAELRIL 748
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/462 (20%), Positives = 186/462 (40%), Gaps = 83/462 (17%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I + G L A+ +F QM +R VVSWN+++ Y + + M + +
Sbjct: 311 SNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGL 370
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV-GSGLLFFYANCFEIEEAK 139
+ + T ++ S+ AQ + + +H +++ G+ V G+ ++ YA I+ A
Sbjct: 371 EPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAH 430
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+VF+ + + + W+ ++ GY Q L S+A +V
Sbjct: 431 KVFNLIPVKDVVSWNTLISGYTQNGLASEAIEV--------------------------- 463
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+R M E E N+ T+ S++ A A +GA +G +HG LIK D +G L
Sbjct: 464 -----YRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCL 518
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYN 319
I+ Y C GR+ DA +F ++ +S+ +N
Sbjct: 519 IDLYGKC-------------------------------GRLVDAMCLFYQVPRESSVPWN 547
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
++I + ++G + + +LF +M + + + VT+ S++S + L
Sbjct: 548 AIISCHGIHGHGEKALKLFREMQDEGV-------------KPDHVTFISLLSACSHSGLV 594
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
++ + M++ I + + + G L ++ + + P + + +L
Sbjct: 595 DEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFL---EMAYDFIKDMPLHPDASIWGAL 651
Query: 440 VDMYSRCGSI---NDAQASFSSISSPNVAAWTALMNGYSHHG 478
+ G+I A + S NV + L N Y++ G
Sbjct: 652 LGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVG 693
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 131/274 (47%), Gaps = 23/274 (8%)
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
A L+ + ++N IS ++ YA G V S+ F+++ + +
Sbjct: 97 ALLVVSGKIQSNFISIR-LVNLYASLGDVSLSRGTFDQIQRKDV---------------- 139
Query: 363 PVTWNSMISGYVQNNLHEKALQ-LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
TWNSMIS YV+N +A+ Y + TF + AC +L G+ +H
Sbjct: 140 -YTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ---TLVDGRKIH 195
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
+ K F+ +V+V SL+ MYSR G + A++ F + ++ +W A+++G +G +
Sbjct: 196 CWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAA 255
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
+A+ + + M + I ++ T +L C + G ++ I + +G+ L ++
Sbjct: 256 QALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALI 315
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ + G+L +A++ + M + D V W ++++A
Sbjct: 316 NMYAKFGNLGDAQKVFQQMFLR-DVVSWNSIIAA 348
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 209/671 (31%), Positives = 350/671 (52%), Gaps = 58/671 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N IT GR +AR +FD+MP R VSW +++ + + + ++L L S+M RS
Sbjct: 90 NHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTA 149
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ + + C +L + G+Q+H LKS GS L+
Sbjct: 150 ADQFALGSAVRACTELGDVGTGRQVHAHALKSER------GSDLI--------------- 188
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-K 200
+ + ++ Y + L+ D F +F ++ KD++ W +I+G+A+ G E +
Sbjct: 189 ----------VQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQ--GFEME 236
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL++FR M G + PNE+ F S RAC +G++ G+ +HGL IK + D +G +L
Sbjct: 237 ALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLS 296
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA------- 313
+ Y C+ D A + R+E P L + NS++N G + +A ++F+ + ++
Sbjct: 297 DMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGI 356
Query: 314 ------------NSISYNSMIKGYAVYGQVDDSKRLFEKM--PHRSIISLNTMISVIPEM 359
+++ + +I Y V +D + + + L++ + V E+
Sbjct: 357 TVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEI 416
Query: 360 -ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+++ VTWNS+++ Q+N E+ L+L+ + K R + + + A + LG + +
Sbjct: 417 KDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVK 476
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGYSHH 477
+HA+ K + + +L+D Y++CGS++DA F + ++ +V +W++L+ GY+
Sbjct: 477 QVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQF 536
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEH 536
G EA LF M I PN TF+GVL+AC R G VNEG + M+ YG+VPT EH
Sbjct: 537 GYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREH 596
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
+C+VDLL R+G L EA FI MP E D ++W LL+A +ME+G+RAA+ + +D
Sbjct: 597 CSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNID 656
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
+AYV+L NIYA G W + ++K + VKK PG SW++L + F VEDR++
Sbjct: 657 PSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSH 716
Query: 657 PNCNVIYATLE 667
P IYA LE
Sbjct: 717 PESEEIYAMLE 727
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 208/490 (42%), Gaps = 105/490 (21%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
++ ++S C++L SL G+++H ++ S + +G
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAG---------------------- 84
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
N +L + ++ Y +C A VF +MP ++ V W +I+ + ++ + AL LF
Sbjct: 85 --NTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGD-ALGLFS 141
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M SG +++ S +RAC LG G+ VH +K D + AL+ Y
Sbjct: 142 SMLRSG-TAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSK- 199
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
NGL ++D ++F R+ + + IS+ S+I G+A
Sbjct: 200 -------------------------NGL-----VDDGFMLFERIKDKDLISWGSIIAGFA 229
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G ++ ++F +M I E +P N H
Sbjct: 230 QQGFEMEALQVFREM--------------IVEGSHHP------------NEFH------- 256
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
F F AC +GS + G+ +H +K + ++YVG SL DMY+RC
Sbjct: 257 --------------FGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARC 302
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
+++ A+ +F I +P++ +W +++N YS GL SEA++LF M + + P+ T G+L
Sbjct: 303 KNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLL 362
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
ACV + G I + G+ + ++ + R L A + ++ + D
Sbjct: 363 CACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK-DQDV 421
Query: 567 VVWGALLSAC 576
V W ++L+AC
Sbjct: 422 VTWNSILTAC 431
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 126/562 (22%), Positives = 230/562 (40%), Gaps = 106/562 (18%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-H 76
++ N +T +NG + LF+++ + ++SW +++ G+++ E+L + M
Sbjct: 187 LIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIV 246
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ NE F + C + S G+QIH L +K + +VG L YA C ++
Sbjct: 247 EGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLD 306
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+ F ++ D+V W +++ Y SV+
Sbjct: 307 SARV-------------------------------AFYRIEAPDLVSWNSIVNAY--SVE 333
Query: 197 G-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
G +AL LF MR+SG P+ T ++ AC A G+++H L+K G + D S+
Sbjct: 334 GLLSEALVLFSEMRDSGLR-PDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSV 392
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF-------- 307
+L+ Y C AM V+ +++ + NS++ E+ +F
Sbjct: 393 CNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP 452
Query: 308 --------NRLTEANSISY-----------------------NSMIKGYAVYGQVDDSKR 336
N L+ + + Y N++I YA G +DD+ R
Sbjct: 453 SLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMR 512
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
LFE M + R+ +W+S+I GY Q ++A L+ MR L I
Sbjct: 513 LFEIMGN----------------NRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRP 556
Query: 397 TRSTFSVLFHACSCLGSLQQG----QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
TF + ACS +G + +G ++ P + + +VD+ +R G + +A
Sbjct: 557 NHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHC---SCIVDLLARAGKLTEA 613
Query: 453 QASFSSIS-SPNVAAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+ P++ W L+ H +G A E +L D ++A +V + +
Sbjct: 614 ANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAA---EGILNID-PSHSAAYVLLCNI 669
Query: 509 CVRAGLVNEGMKIFRSMKSYGV 530
+G NE ++ ++M++ GV
Sbjct: 670 YAASGNWNEFARLKKAMRTSGV 691
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 217/664 (32%), Positives = 341/664 (51%), Gaps = 60/664 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G LV A +F +M R + SWN ++ GY+K FDE+L L M VK + TF
Sbjct: 153 RFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPC 212
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C + +L+ G++IH V++ G+E V + L+ Y C ++ A+ V
Sbjct: 213 VLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV-------- 264
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
F KMP +D + W +ISGY ++ C + L+LF M
Sbjct: 265 -----------------------FDKMPNRDRISWNAMISGYFEN-GVCLEGLRLFGMMI 300
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+ + P+ T SVI AC LG G+ +HG +++ F D SI +LI Y
Sbjct: 301 KYPVD-PDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLI 359
Query: 270 DGAMRVYDRLENPCLNASNSLING----LISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
+ A V+ R E L + ++I+G L+ +E +++ + I+ ++
Sbjct: 360 EEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSAC 419
Query: 326 AVYGQVDDSKRLFEKMPHRSIISL----NTMISVIPE--------------MERNPVTWN 367
+ +D L E + ++S N++I + + +E+N V+W
Sbjct: 420 SCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWT 479
Query: 368 SMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
S+I G NN +AL + M R+L + T + AC+ +G+L G+ +HAH ++
Sbjct: 480 SIILGLRINNRCFEALFFFREMIRRLKPNSV--TLVCVLSACARIGALTCGKEIHAHALR 537
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
T + ++ +++DMY RCG + A F S+ V +W L+ GY+ G G+ A L
Sbjct: 538 TGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDH-EVTSWNILLTGYAERGKGAHATEL 596
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLG 545
F+ M+E ++ PN TF+ +L AC R+G+V EG++ F SMK Y ++P L+HY CVVDLLG
Sbjct: 597 FQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLG 656
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
RSG L EA EFI+ MP++ D VWGALL++C ++E+GE AA+ +F D + Y++
Sbjct: 657 RSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYIL 716
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
LSN+YA GKW K ++RK + + DPGCSW+E+ VHAF D +P I A
Sbjct: 717 LSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINAL 776
Query: 666 LEHL 669
LE
Sbjct: 777 LERF 780
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 238/536 (44%), Gaps = 60/536 (11%)
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
D ++S + +MH + + + + ++ +C + +G +++ V S +G
Sbjct: 85 GNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLG 144
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ LL + V+ + DA+ VF +M K+++
Sbjct: 145 NALLSMF-------------------------------VRFGNLVDAWYVFGRMEKRNLF 173
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W L+ GYAK+ ++AL L+ M G P+ YTF V+R C + G+ +H
Sbjct: 174 SWNVLVGGYAKA-GLFDEALDLYHRMLWVGVK-PDVYTFPCVLRTCGGMPNLVRGREIHV 231
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
+I+ GFE D + ALI Y C + A V+D++ N + N++I+G G +
Sbjct: 232 HVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLE 291
Query: 303 AELIFNRL----TEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIIS 348
+F + + + ++ S+I G ++G V ++ + H S+I
Sbjct: 292 GLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIP 351
Query: 349 LNTMISVIPEME--------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+ + + +I E E R+ V+W +MISGY + +KAL+ Y M I T
Sbjct: 352 MYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEIT 411
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+++ ACSCL +L G LH + S V SL+DMY++C I+ A F S
Sbjct: 412 IAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTL 471
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
N+ +WT+++ G + EA+ F M+ + + PN+ T V VLSAC R G + G +
Sbjct: 472 EKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKE 530
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA-EEFIKDMPIELDAVVWGALLSA 575
I GV ++D+ R G + A ++F ++ + W LL+
Sbjct: 531 IHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFS---VDHEVTSWNILLTG 583
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 199/485 (41%), Gaps = 55/485 (11%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + N IT + G + TAR +FD+MP R +SWN M+ GY + E L L
Sbjct: 239 ESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGM 298
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M + V + T +++++ C L G+QIH VL++ + + + L+ Y++
Sbjct: 299 MIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGL 358
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
IEEA+ VF + + W+ M+ GY C MP
Sbjct: 359 IEEAETVFSRTECRDLVSWTAMISGYENC-----------LMP----------------- 390
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+KAL+ ++ M G MP+E T V+ AC+ L G +H + + G
Sbjct: 391 ----QKALETYKMMEAEG-IMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSI 445
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN---RLT 311
+ +LI+ Y C+ D A+ ++ + + S+I GL R +A F R
Sbjct: 446 VANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRRL 505
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------ 359
+ NS++ ++ A G + K + + M + I +M
Sbjct: 506 KPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWK 565
Query: 360 -----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+ +WN +++GY + A +L+ M + + TF + ACS G +
Sbjct: 566 QFFSVDHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMV 625
Query: 415 QQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMN 472
+G + ++ K N+ +VD+ R G + +A + P+ A W AL+N
Sbjct: 626 AEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLN 685
Query: 473 GYSHH 477
H
Sbjct: 686 SCRIH 690
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 205/655 (31%), Positives = 343/655 (52%), Gaps = 55/655 (8%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR LFD + ++T +W T++ GYSK + SL L M +V ++ S++LS C
Sbjct: 195 ARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLM 254
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L L GKQIHC VL+SG + +G + FY C +++ +++FD
Sbjct: 255 LKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFD------------- 301
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+M K+VV WT +I+G ++ AL LF M G N P
Sbjct: 302 ------------------RMVDKNVVSWTTVIAGCMQN-SFHRDALDLFVEMARMGWN-P 341
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ + SV+ +C L A +G+ VH IK + D+ + LI+ Y C++ A +V+
Sbjct: 342 DAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVF 401
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNR----LTEANSISYNSMIKGYAVYGQVD 332
+ + L + N++I G ++ +A +F L+ + + S++ A ++
Sbjct: 402 NLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLE 461
Query: 333 DSKRL----------FEKMPHRSIISLNTMISVIPE--------MERNPVTWNSMISGYV 374
S ++ ++ ++I + + S + + +++ V W +M SGY
Sbjct: 462 LSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYT 521
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
Q + +E++L+LY ++ + TF+ + A S + SL+ GQ H ++K F+ + +
Sbjct: 522 QQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPF 581
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
V +LVDMY++ GSI +A +F S + + A W +++ Y+ HG +A+ +FE M+ +
Sbjct: 582 VANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEG 641
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
+ PN TFVGVLSAC GL++ G F SM +G+ P +EHY C+V LLGR+G L+EA+
Sbjct: 642 LKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAK 701
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
EFI+ MPI+ AVVW +LLSAC N+E+G AA+ + +YV+LSNI+A G
Sbjct: 702 EFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKG 761
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
W +R+++ V K+PGCSWIE+N+ +H F +D + + I L++L
Sbjct: 762 MWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNL 816
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/550 (24%), Positives = 229/550 (41%), Gaps = 72/550 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL-VSTMHRSNVKLNETTFSTILSVCA 95
A LFD M + +V+W++M+ Y+ + E+L L V M N K NE ++++ C
Sbjct: 93 ANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACT 152
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
Q L QIH LV+K GY +V + L+ FY I++A+ +FD L W
Sbjct: 153 QFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTW-- 210
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
T +I+GY+K + +LKLF M+E G
Sbjct: 211 -----------------------------TTIIAGYSKQ-GRSQVSLKLFDQMKE-GHVC 239
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P++Y SV+ AC L GK +H +++ G D S+ I+FY C ++
Sbjct: 240 PDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKL 299
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIF---------------------------- 307
+DR+ + + + ++I G + DA +F
Sbjct: 300 FDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVAL 359
Query: 308 --NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
R A +I N + G +D + R + +L I + V+
Sbjct: 360 EKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDL--------VS 411
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
+N+MI GY + + +AL L+ MR T F L + L L+ +H ++
Sbjct: 412 YNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLII 471
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K + + G++L+D+YS+C + DA+ F I ++ WTA+ +GY+ E++
Sbjct: 472 KYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLK 531
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
L++ + + PN TF V++A + G + + G +VD+
Sbjct: 532 LYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYA 591
Query: 546 RSGHLHEAEE 555
+SG + EA +
Sbjct: 592 KSGSIEEAHK 601
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 231/469 (49%), Gaps = 31/469 (6%)
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C +I VF H+ + L + +L Y + NL++ A +F M K++V W+ ++S Y
Sbjct: 57 CKKIHSKIVVFG-FHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMY 115
Query: 192 AKSVDGCEKALKLF-RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
C +AL LF ++MR E PNEY SV+RAC + G +HGL++K G+
Sbjct: 116 THH-SHCLEALMLFVQFMRSCNEK-PNEYILASVVRACTQFGGLNPALQIHGLVVKGGYV 173
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
D + +LI+FY D A ++D L+ ++I G GR + + +F+++
Sbjct: 174 QDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQM 233
Query: 311 TEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE-------- 358
E + +S++ + ++ K++ + I+ +M++ +
Sbjct: 234 KEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKV 293
Query: 359 ----------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
+++N V+W ++I+G +QN+ H AL L++ M ++ + + + ++C
Sbjct: 294 QLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSC 353
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
L +L++G+ +HA+ +K +++ +V L+DMY++C S+ DA+ F+ +++ ++ ++
Sbjct: 354 GSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYN 413
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
A++ GYS EA+ LF M P FV +L + +I + Y
Sbjct: 414 AMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKY 473
Query: 529 GVVPTLEHY--TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
GV +L+ + + ++D+ + + +A +++ + D VVW A+ S
Sbjct: 474 GV--SLDEFAGSALIDVYSKCSRVGDARLVFEEIQ-DKDIVVWTAMFSG 519
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 153/362 (42%), Gaps = 77/362 (21%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L AR +F+ M +VS+N M+ GYS+ K E+L L M S F ++L V
Sbjct: 394 LTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGV 453
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
A L L QIH L++K G EF GS L+ Y+ C + +A+ VF+E+ + + ++W
Sbjct: 454 SASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVW 513
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ M GY Q + E++LKL++ ++ S
Sbjct: 514 TAMFSGYTQQS--------------------------------ENEESLKLYKCLQMS-R 540
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
PNE+TF +VI A + + + G+ H +IK GF+ D + L++ Y
Sbjct: 541 LKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKS------- 593
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
G IE+A F ++ +NSMI YA +G+ +
Sbjct: 594 ------------------------GSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEK 629
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
+ ++FE M ++ ++ N VT+ ++S L + + +M +
Sbjct: 630 ALQVFEDM-------------IMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFG 676
Query: 394 ID 395
I+
Sbjct: 677 IE 678
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 19/259 (7%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+++ Y+ V+ + +LF+ M H+ N VTW+SM+S Y ++
Sbjct: 78 NTLLHAYSKLNLVNHANKLFDTMSHK-----------------NLVTWSSMVSMYTHHSH 120
Query: 379 HEKALQLYMT-MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+AL L++ MR + + AC+ G L +H +VK + +VYV T
Sbjct: 121 CLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCT 180
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SL+D Y++ I+DA+ F + WT ++ GYS G ++ LF+ M E + P
Sbjct: 181 SLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCP 240
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
+ VLSAC+ + G +I + G+V + +D + + +
Sbjct: 241 DKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLF 300
Query: 558 KDMPIELDAVVWGALLSAC 576
M ++ + V W +++ C
Sbjct: 301 DRM-VDKNVVSWTTVIAGC 318
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 216/678 (31%), Positives = 348/678 (51%), Gaps = 59/678 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I + N I+ + G++ A +F + R VSWNTM+ G+ F+ +L + +M R
Sbjct: 34 IYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKR 93
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ +F +IL A + + G+Q+H +++K GYE F GS LL YA C +E
Sbjct: 94 YGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVE- 152
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
DAF+VF + ++ V W LISGYA+ D
Sbjct: 153 ------------------------------DAFEVFKSINIRNSVTWNALISGYAQVGDR 182
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
A L M G + ++ TF ++ VH ++K G D ++
Sbjct: 183 G-TAFWLLDCMELEGVEI-DDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCN 240
Query: 258 ALIEFYCGCEAFDGAMRVYD-RLENPCLNASNSLINGLISMGRIEDAELIFNRLT----E 312
A+I Y C + + A RV+D +E L NS++ + + E+A +F + E
Sbjct: 241 AIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFE 300
Query: 313 ANSISYNSMI----------KGYAVYGQVDDSKRLFEKMPHRSII---------SLNTMI 353
+ +Y S+I +G +++G V F S+I S++ +
Sbjct: 301 PDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEAL 360
Query: 354 SVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
++ +E ++ V+WNS+++G+ Q+ L E AL+ + MR + FS + +CS L
Sbjct: 361 NIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLA 420
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+LQ GQ +H ++K+ FE N +V +SL+ MYS+CG I DA+ SF + + AW +L+
Sbjct: 421 TLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIF 480
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVV 531
GY+ HG G A+ LF +M ++ + + TFV VL+AC GLV EG +SM+S YG+
Sbjct: 481 GYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIP 540
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P +EHY C++DLLGR+G L EA+ I+ MP E DA+VW LL AC ++E+ + A
Sbjct: 541 PRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASH 600
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+ L+ + YV+LS+++ L +W +K I++ + VKK PG SWIE+ + V +F+
Sbjct: 601 LLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNA 660
Query: 652 EDRNNPNCNVIYATLEHL 669
EDR++PNC IY L L
Sbjct: 661 EDRSHPNCEEIYLRLGEL 678
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 223/509 (43%), Gaps = 93/509 (18%)
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
HCL +KSG + + ++ YA C EI A ++F E + + + W+ M+ G+V
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
A + F+K K+ Y +VDG Y+F S+++
Sbjct: 82 ETALE-FLKSMKR-----------YGFAVDG---------------------YSFGSILK 108
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
A +G G+ VH +++K G+E + G AL++ Y CE + A V+ +
Sbjct: 109 GVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVT 168
Query: 287 SNSLINGLISMG-----------------RIED-----------------------AELI 306
N+LI+G +G I+D A+++
Sbjct: 169 WNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIV 228
Query: 307 FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
+ L ++ N++I Y+ G ++D++R+F+ ++ T R+ VTW
Sbjct: 229 KHGLASDTTVC-NAIITAYSECGSIEDAERVFDG-------AIET---------RDLVTW 271
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
NSM++ Y+ NN E+A QL++ M+ L + T++ + A QG+ LH ++K
Sbjct: 272 NSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIK 331
Query: 427 TPFESNVYVGTSLVDMY--SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
E V + SL+ MY S S+++A F S+ + + +W +++ G+S GL +A+
Sbjct: 332 RGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDAL 391
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
FE M Q +V + F VL +C + G ++ + G P + ++ +
Sbjct: 392 KFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMY 451
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G + +A + P + ++ W +L+
Sbjct: 452 SKCGVIEDARKSFDATPKD-SSIAWNSLI 479
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 17/265 (6%)
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
T A+ + N++I GYA G++ + ++F + +R+ V+WN+MI
Sbjct: 30 TTASIYTANNIISGYAKCGEIRIASKMFGETS-----------------QRDAVSWNTMI 72
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
+G+V E AL+ +M++ +F + +C+G ++ GQ +H+ +VK +E
Sbjct: 73 AGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYE 132
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
NV+ G++L+DMY++C + DA F SI+ N W AL++GY+ G A L + M
Sbjct: 133 GNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCM 192
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
+ + + TF +L+ L ++ + +G+ ++ G +
Sbjct: 193 ELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSI 252
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
+AE D V W ++L+A
Sbjct: 253 EDAERVFDGAIETRDLVTWNSMLAA 277
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 6/180 (3%)
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
S +L + + H +K+ +++Y +++ Y++CG I A F S + +W
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
++ G+ + G A+ + M + +F +L G V G ++ M
Sbjct: 70 TMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKM 129
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G + + ++D+ + + +A E K + I ++V W AL+S +VG+R
Sbjct: 130 GYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIR-NSVTWNALISGY-----AQVGDRG 183
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 227/689 (32%), Positives = 346/689 (50%), Gaps = 68/689 (9%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
AR L +VSW+ ++ GY + + +E+L M+ K NE TFS++L C+
Sbjct: 100 VARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCS 159
Query: 96 QLNSLIDGKQIHCLVL-----KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL----H 146
+L GKQIH + L +G EF S +L A + +V L +
Sbjct: 160 LTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGY 219
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ + + +L Y + A VF ++PK D+V W +I+G + + ALKL
Sbjct: 220 DSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLH-EKNDLALKLLG 278
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M S P+ +T S ++ACA +G G+ +H L+K E D +G LI+ Y C
Sbjct: 279 KM-GSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKC 337
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMG-RIEDAELIFNRLTEA---NSISYNSMI 322
A V+D + + NS+I+G + G IE L N E N + ++++
Sbjct: 338 GLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTIL 397
Query: 323 K--------------------------GYAV------YGQ---VDDSKRLFEKMPHRSII 347
K GY YG+ ++D+ ++FE P +
Sbjct: 398 KSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDL- 456
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
V + SMI+ Y Q L E+AL++Y+ M+ I FS LF+A
Sbjct: 457 ----------------VAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNA 500
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ L + +QG+ +H H++K S+V+ G SLV+MY++CGSI+DA F+ IS + +W
Sbjct: 501 CANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSW 560
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
+A++ G + HG G +A+ LF ML+ I+PN T V VLSAC AGLV E + F M K
Sbjct: 561 SAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEK 620
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+G+ PT EHY C+VD+LGR G L EA +K+MP + A VWGALL A N+E+G
Sbjct: 621 LFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGR 680
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
AA+ + L+ + +++L+NIYA G W +R+ + + VKK+PG SWIEL +V
Sbjct: 681 HAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKV 740
Query: 647 HAFSVEDRNNPNCNVIYATLEHLTANLNS 675
+ F V DR++P IY L+ L L S
Sbjct: 741 YTFIVGDRSHPRSKEIYVKLDDLRERLTS 769
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 214/476 (44%), Gaps = 71/476 (14%)
Query: 128 FYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA----FDVFIKMPKKDVVV 183
Y+ C A+++ + E + + WS ++ GYVQ +A +++++ K +
Sbjct: 91 LYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFT 150
Query: 184 WTKLISGYAKSVD---GCE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
++ ++ G + + + G + + L M +G + PNE++ +V+ ACA L G
Sbjct: 151 FSSVLKGCSLTRNLELGKQIHRVALVTEMISTGIS-PNEFSLSTVLNACAGLEDENYGMK 209
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN------- 292
VHG LIK G++ D AL++ Y + A+ V+ + P + + N++I
Sbjct: 210 VHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEK 269
Query: 293 ---------------------------------GLISMGRIEDAELIFNRLTEANSISYN 319
GL+ +GR + L+ + E +S
Sbjct: 270 NDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDM-EPDSFVGV 328
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
+I Y+ G + D++ +F+ MP + +I WNS+ISGY
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVI-----------------VWNSIISGYSNCGYD 371
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG--QLLHAHLVKTPFESNVYVGT 437
+A+ L+ M K ++ ++T S + S GS G + +H +K+ ++ + YV
Sbjct: 372 IEAMSLFTNMYKEGLEFNQTTLSTILK--STAGSQANGFCEQVHTISIKSGYQYDGYVAN 429
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SL+D Y +C + DA F + ++ A+T+++ YS +GLG EA+ ++ M ++DI P
Sbjct: 430 SLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKP 489
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
+A F + +AC +G +I + G++ + +V++ + G + +A
Sbjct: 490 DAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDA 545
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 129/557 (23%), Positives = 231/557 (41%), Gaps = 108/557 (19%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N + ++G A +F ++P +VSWN ++ G K D +L L+ M
Sbjct: 225 SANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYR 284
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V + T S+ L CA + + G+Q+H ++K E FVG GL+ Y+ C +++A+
Sbjct: 285 VAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDAR 344
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VFD + + ++W+ ++ GY C +D+
Sbjct: 345 MVFDLMPXKDVIVWNSIISGYSNC-----GYDI--------------------------- 372
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACA--RLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+A+ LF M + G N+ T +++++ A + FCE VH + IK G+++D +
Sbjct: 373 EAMSLFTNMYKEGLEF-NQTTLSTILKSTAGSQANGFCEQ--VHTISIKSGYQYDGYVAN 429
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----- 312
+L++ Y C + A +V++ L A S+I G E+A ++ R+ +
Sbjct: 430 SLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKP 489
Query: 313 ------------ANSISY----------------------NSMIKGYAVYGQVDDSKRLF 338
AN +Y NS++ YA G +DD+ +F
Sbjct: 490 DAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIF 549
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
++ R I+S W++MI G Q+ KALQL+ M K I
Sbjct: 550 NEISWRGIVS-----------------WSAMIGGLAQHGHGRKALQLFYQMLKNGILPNH 592
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDAQA 454
T + AC+ G + + + + K TP + + +VD+ R G +++A
Sbjct: 593 ITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHY---ACMVDILGRVGRLDEAMV 649
Query: 455 SFSSIS-SPNVAAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
+ + A W AL+ H LG A + + LE + + T + + +
Sbjct: 650 LVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEML-LTLEPE---KSGTHILLANIYA 705
Query: 511 RAGLVNEGMKIFRSMKS 527
G+ + K+ RSMK+
Sbjct: 706 STGMWDNVAKVRRSMKN 722
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 180/427 (42%), Gaps = 99/427 (23%)
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANS 315
+ Y C+ F A ++ P L + ++LI+G + GR E+A L + + + N
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 316 ISYNSMIKGYAVYGQVDDSKR-----LFEKMPHRSI----ISLNTMISVIPEME------ 360
+++S++KG ++ ++ K+ L +M I SL+T+++ +E
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 361 ------------RNPVTWNSMISGYVQNN----------------------------LHE 380
+P + N+++ Y ++ LHE
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 381 K---ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
K AL+L M + + T S AC+ +G ++ G+ LH+ L+K E + +VG
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
L+DMYS+CG + DA+ F + +V W ++++GYS+ G EA+ LF M ++ +
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388
Query: 498 NAATFVGVLSAC----------------VRAGLVNEGMKIFRSMKSYG------------ 529
N T +L + +++G +G + SYG
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448
Query: 530 -VVPT--LEHYTCVVDLLGRSGHLHEAEEF---IKDMPIELDAVVWGALLSACWFWMNME 583
V P L YT ++ + G EA + ++D I+ DA ++ +L +AC N+
Sbjct: 449 EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNAC---ANLS 505
Query: 584 VGERAAQ 590
E+ Q
Sbjct: 506 AYEQGKQ 512
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 211/696 (30%), Positives = 371/696 (53%), Gaps = 59/696 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRSNV 80
N +T +NG++ AR LFD+M R +VSWNTM+ GY +E+ L M R N
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNF 111
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVL-KSGYECFEFVGSGLLFFYANCFEIEEAK 139
+++ +++ + L +++ LV K C+ + +G YA ++A+
Sbjct: 112 -----SWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAG----YAKKGRFDDAE 162
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+VF+++ + + ++ ML GY Q M A F +M +++VV W +++G+ + D
Sbjct: 163 KVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCD-LG 221
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK-----------VVHGLLIKC- 247
A +LF + + PN ++ +++ AR G E + V +I
Sbjct: 222 SAWELFEKIPD-----PNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAY 276
Query: 248 --GFEFDESIG-------------GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
+ DE++ +I Y D A VY+++ + A +L++
Sbjct: 277 VQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMS 336
Query: 293 GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
GLI GRI++A +F++L + ++I +NSMI GY G++ ++ LF +MP ++ +S NTM
Sbjct: 337 GLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTM 396
Query: 353 ISVIP---EMER-----------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
IS EM+R N ++WNS+I+G++QN L+ AL+ + M + +
Sbjct: 397 ISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQ 456
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
STF+ +C+ L +LQ G+ LH ++K+ + ++++V +L+ MY++CG + A+ F
Sbjct: 457 STFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKD 516
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
I ++ +W +L++GY+ +G +EA FE M + VP+ TF+G+LSAC AGL N+G
Sbjct: 517 IEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQG 576
Query: 519 MKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
+ +F+ M + + + P EHY+C+VDLLGR G L EA ++ M ++ +A +WG+LL+AC
Sbjct: 577 VDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACR 636
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
NME+G+ AA ++ L+ S Y+ LSN++A G+W +R + K PGC
Sbjct: 637 VHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGC 696
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
SWIE+ +++ F +D I L L+A++
Sbjct: 697 SWIEVQNQIQNFVSDDPGKLRTESIKIILNTLSAHM 732
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 117/510 (22%), Positives = 238/510 (46%), Gaps = 78/510 (15%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+I+EAKRVF + N ++ M+ + + +SDA +F KM ++++V W +I+GY
Sbjct: 32 KIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLH 91
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ + E+A KLF M E + +++ +I R G + + + L+ + D
Sbjct: 92 N-NMVEEAHKLFDLMAER-----DNFSWALMITCYTRKGMLEKARELFELVPD---KLDT 142
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
+ A+I Y FD A +V++++ L + NS++ G G++ A F R+ E
Sbjct: 143 ACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAER 202
Query: 314 NSISYN-------------------------------SMIKGYAVYGQVDDSKRLFEKMP 342
N +S+N +M+ G+A +G++ ++++LF++MP
Sbjct: 203 NVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMP 262
Query: 343 HRSIISLNTMISV-IPEME-------------RNPVTWNSMISGYVQNNLHEKALQLY-- 386
++++S N MI+ + +++ ++ V+W +MI+GYV+ ++A ++Y
Sbjct: 263 CKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQ 322
Query: 387 MTMRKLA--------------IDRTRSTFSVLFHACS-CLGSL-----QQGQLLHA-HLV 425
M + +A ID FS L + C S+ Q G++ A +L
Sbjct: 323 MPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLF 382
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ N +++ Y++ G ++ A F ++ NV +W +L+ G+ +GL +A+
Sbjct: 383 RQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALK 442
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
+M ++ P+ +TF LS+C + G ++ + G + L ++ +
Sbjct: 443 SLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYA 502
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G + AE+ KD+ +D + W +L+S
Sbjct: 503 KCGGVQSAEKVFKDIE-GVDLISWNSLISG 531
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 192/462 (41%), Gaps = 109/462 (23%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS N + N L +A LF+++P VSW TMLCG+++ K E+ L
Sbjct: 201 ERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDR 260
Query: 75 MHRSNV--------------KLNET-------------TFSTILSVCAQLNSLIDGKQIH 107
M NV +++E +++T+++ ++ L + ++++
Sbjct: 261 MPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVY 320
Query: 108 CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
+ + SGL+ I+EA +VF +L++ + + W+ M+ GY Q MS
Sbjct: 321 NQMPYKDVAAKTALMSGLI----QNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMS 376
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR---------W----------- 207
+A ++F +MP K+ V W +ISGYA++ + ++A ++F W
Sbjct: 377 EALNLFRQMPVKNAVSWNTMISGYAQAGE-MDRATEIFEAMGVRNVISWNSLITGFLQNG 435
Query: 208 -----------MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
M + G+ P++ TF + +CA L A GK +H L++K G+ D +
Sbjct: 436 LYLDALKSLVLMGQEGKK-PDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVS 494
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
ALI Y C A +V+ +E L I
Sbjct: 495 NALIAMYAKCGGVQSAEKVFKDIEGVDL-------------------------------I 523
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S+NS+I GYA+ G +++ FE+M + + VT+ M+S
Sbjct: 524 SWNSLISGYALNGYANEAFWAFEQMSSEGTVP-------------DEVTFIGMLSACSHA 570
Query: 377 NLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQG 417
L + + L+ M AI+ +S L +G L++
Sbjct: 571 GLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEA 612
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 170/345 (49%), Gaps = 38/345 (11%)
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N I L G+I++A+ +F+ + N +YNSM+ +A G+V D+++LF+KM
Sbjct: 21 NKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMS----- 75
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
+RN V+WN+MI+GY+ NN+ E+A +L+ L +R +++++
Sbjct: 76 ------------QRNLVSWNTMIAGYLHNNMVEEAHKLF----DLMAERDNFSWALMITC 119
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
+ G L++ + L LV ++ + +++ Y++ G +DA+ F + ++ ++
Sbjct: 120 YTRKGMLEKARELF-ELVPDKLDTACW--NAMIAGYAKKGRFDDAEKVFEKMPVKDLVSY 176
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
+++ GY+ +G A+ FE M E+++V G ++ C + ++F +
Sbjct: 177 NSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCD----LGSAWELFEKIPD 232
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
P + ++ R G + EA + MP + + V W A+++A + ++++ E
Sbjct: 233 ----PNAVSWVTMLCGFARHGKIVEARKLFDRMPCK-NVVSWNAMIAA--YVQDLQIDE- 284
Query: 588 AAQKMFG-LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
A K+F K ++ + N Y +GK + ++ ++ + +V
Sbjct: 285 -AVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDV 328
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 145/297 (48%), Gaps = 19/297 (6%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N I+ + G++ A +F+ M +R V+SWN+++ G+ + + ++L + M +
Sbjct: 391 VSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQE 450
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
K +++TF+ LS CA L +L GKQ+H L+LKSGY FV + L+ YA C ++ A
Sbjct: 451 GKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSA 510
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAKS 194
++VF ++ + + W+ ++ GY ++AF F +M + D V + ++S + +
Sbjct: 511 EKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHA 570
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDE 253
+ + LF+ M E P + ++ R+G E +V G+ +K +
Sbjct: 571 -GLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKA----NA 625
Query: 254 SIGGALIEFYCGCEAFD----GAMRVYDRLENPCLNASN--SLINGLISMGRIEDAE 304
+ G+L+ C G + LE NASN +L N GR ED E
Sbjct: 626 GLWGSLL---AACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVE 679
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 11/200 (5%)
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
NV+ + + G I++A+ FS++ N A + +++ ++ +G S+A LF+ M
Sbjct: 16 NVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMS 75
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
++++V G L +V E K+F M TC R G L
Sbjct: 76 QRNLVSWNTMIAGYL----HNNMVEEAHKLFDLMAERDNFSWALMITCYT----RKGMLE 127
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
+A E + +P +LD W A+++ + E+ +KM K + +Y + Y
Sbjct: 128 KARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKM---PVKDLVSYNSMLAGYT 184
Query: 612 VLGKWGKKMDIRKRLTHLEV 631
GK G M +R+ V
Sbjct: 185 QNGKMGLAMKFFERMAERNV 204
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 207/666 (31%), Positives = 329/666 (49%), Gaps = 59/666 (8%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS + + G + A L+++ P+ +V + M+ G+ + ++ ++
Sbjct: 177 EKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFTVFRK 236
Query: 75 MHRSNVKLNETTFSTILSVCA-----QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY 129
M +V+ N T ++ C L + G + C + + E V + L+ Y
Sbjct: 237 MLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIE----VHNSLITLY 292
Query: 130 ANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
+ A+RVFD++ + + W+ +L Y + A V MP ++ V W LI+
Sbjct: 293 LRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGARRVLDAMPARNEVSWGTLIA 352
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
+ + D E ALKL+ M G PN F SV+ ACA L G +H +K G
Sbjct: 353 RHEQKGDTAE-ALKLYSQMLADGCR-PNISCFSSVLSACATLQDLRGGTRIHANALKMGS 410
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
+ + +LI+ YC C+ A RV FN
Sbjct: 411 STNLFVSSSLIDMYCKCKQCTYAQRV-------------------------------FNS 439
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
L E N++ +NS+I GY+ G++ +++ LF KMP RN V+WN+M
Sbjct: 440 LPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMP-----------------ARNSVSWNTM 482
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
ISGY +N AL + M T S + AC+ L SL+ G+++HA +VK
Sbjct: 483 ISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGI 542
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
E N+++GT+L DMY++ G ++ ++ F + N WTA++ G + +G E++ LFE
Sbjct: 543 EDNIFMGTALCDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFED 602
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
M+E I PN TF+ +L AC GLV + + F +M+++G+ P +HYTC+VD+L R+G
Sbjct: 603 MIENGIAPNEHTFLAILFACSHCGLVEQAIHYFETMQAHGIPPKSKHYTCMVDVLARAGC 662
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
L EAEE + + ELD W +LLSAC + N E+GERAA+K+ L+K + YV+LSN+
Sbjct: 663 LPEAEELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNM 722
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
YA GKW + R + +KKD GCSW++L + HAF +P IY L+ L
Sbjct: 723 YASCGKWKDAAETRILMQGASLKKDAGCSWLQLRGQYHAFFSWKEKHPLSLEIYEILDLL 782
Query: 670 TANLNS 675
L +
Sbjct: 783 MLELTT 788
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 139/337 (41%), Gaps = 50/337 (14%)
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEAN---SISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+++L+ + R D + F A+ S +Y+ M+ + G + ++RLF MP
Sbjct: 118 ASNLLTAYAAFARAGDRDQAFRDCVAADAASSFTYDFMVSEHVKAGDIASARRLFYGMPE 177
Query: 344 RSIISLNTMISVIPE----------MERNPVT----WNSMISGYVQNNLHEKALQLYMTM 389
+S++S TM+ + + ER P+ + +MISG+V+N LH+ A ++ M
Sbjct: 178 KSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFTVFRKM 237
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGS 448
++ T + AC G + VK FE ++ V SL+ +Y R G
Sbjct: 238 LTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGD 297
Query: 449 INDAQASFSSISSPNVAAWTALMNGYS-------------------------------HH 477
A+ F + +V +WTAL++ Y+
Sbjct: 298 AAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGARRVLDAMPARNEVSWGTLIARHEQK 357
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
G +EA+ L+ ML PN + F VLSAC + G +I + G L
Sbjct: 358 GDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVS 417
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+ ++D+ + A+ +P E + V W +L+S
Sbjct: 418 SSLIDMYCKCKQCTYAQRVFNSLP-EKNTVCWNSLIS 453
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 204/638 (31%), Positives = 326/638 (51%), Gaps = 89/638 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A LFD MP R VVSWN M+ S+ + E+L +V M V+L+ TT+++ L+ CA+
Sbjct: 243 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR 302
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L+SL GKQ+H V+++ +V S L+ YA +EAK VF+ LH+ N
Sbjct: 303 LSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNN------ 356
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENM 215
V WT LISG+ + GC ++++LF MR +
Sbjct: 357 -------------------------VAWTVLISGFLQY--GCFTESVELFNQMRAELMTL 389
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+++ ++I C C G+ +H L +K G + +LI Y C+
Sbjct: 390 -DQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD-------- 440
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
++ AE IF + E + +S+ SMI Y+ G V ++
Sbjct: 441 -----------------------NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAR 477
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
F+ M E+N +TWN+M+ Y+Q+ E L++Y M L+ +
Sbjct: 478 EFFDGMS-----------------EKNVITWNAMLGAYIQHGAEEDGLRMYKVM--LSEE 518
Query: 396 RTRS---TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
R T+ LF C+ LG+ + G + VK + V +++ MYS+CG I +A
Sbjct: 519 YVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEA 578
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ F ++ ++ +W A++ GYS HG+G +A+ +F+ +L++ P+ ++V VLS C +
Sbjct: 579 RKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHS 638
Query: 513 GLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GLV EG F MK ++ + P LEH++C+VDLLGR+GHL EA++ I DMP++ A VWGA
Sbjct: 639 GLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGA 698
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
LLSAC N E+ E AA+ +F LD +Y++++ IYA GK IRK + +
Sbjct: 699 LLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGI 758
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
KK+PG SW+E++++VH F +D ++P I L+ L
Sbjct: 759 KKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDEL 796
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/576 (21%), Positives = 243/576 (42%), Gaps = 88/576 (15%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF-DE 144
F+ L C +L + +H ++ G F+ + LL Y +C + +A+R+ +
Sbjct: 26 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 85
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ N + ++ML GY + +SDA ++F +MP +DV W L+SGY +S +L+
Sbjct: 86 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYL-VSLET 144
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F M SG++ PN +T +++C LG + ++ K + D + AL++ +
Sbjct: 145 FLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFV 204
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG 324
C A D A R++ R++ P + NS++ G + ++ A +F+ + E + +S+N M+
Sbjct: 205 RCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 264
Query: 325 YAVYGQVDDS---------------------------------------KRLFEKMPH-- 343
+ G+V ++ ++ +PH
Sbjct: 265 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID 324
Query: 344 ----RSIISLNTMISVIPEM--------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
+++ L E +RN V W +ISG++Q ++++L+ MR
Sbjct: 325 PYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 384
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC----- 446
+ + + L C L G+ LH+ +K+ V V SL+ MY++C
Sbjct: 385 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 444
Query: 447 --------------------------GSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
G++ A+ F +S NV W A++ Y HG
Sbjct: 445 AEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAE 504
Query: 481 SEAVLLFEIMLEQDIV-PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
+ + ++++ML ++ V P+ T+V + C G G +I G++
Sbjct: 505 EDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANA 564
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
V+ + + G + EA + + ++ D V W A+++
Sbjct: 565 VITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITG 599
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 159/324 (49%), Gaps = 5/324 (1%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
++G A+ +F+ + R V+W ++ G+ ++ F ES+ L + M + L++ +
Sbjct: 336 AKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALA 395
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
T++S C L G+Q+H L LKSG V + L+ YA C ++ A+ +F ++E
Sbjct: 396 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK 455
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ M+ Y Q ++ A + F M +K+V+ W ++ Y + E L++++ M
Sbjct: 456 DIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQH-GAEEDGLRMYKVM 514
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
P+ T+ ++ + CA LGA G + G +K G D S+ A+I Y C
Sbjct: 515 LSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGR 574
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN----RLTEANSISYNSMIKG 324
A +V+D L + + N++I G G + A IF+ R + + ISY +++ G
Sbjct: 575 ILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSG 634
Query: 325 YAVYGQVDDSKRLFEKMPHRSIIS 348
+ G V + K F+ M IS
Sbjct: 635 CSHSGLVQEGKFYFDMMKRAHNIS 658
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 17 LIVST---NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
LI+ T N IT + G+++ AR +FD + ++ +VSWN M+ GYS+ +++ +
Sbjct: 555 LIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFD 614
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
+ + K + ++ +LS C+ + +GK
Sbjct: 615 DILKRGAKPDYISYVAVLSGCSHSGLVQEGK 645
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 213/666 (31%), Positives = 337/666 (50%), Gaps = 82/666 (12%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
+FD++ WNTM+ Y + +++L L M ++NV + T+ ++ CA
Sbjct: 97 IFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLL 156
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
GK+IH VLK G++ +V + L+ YA C + +A+++FDE + + W+ +L G
Sbjct: 157 EFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAG 216
Query: 160 YVQCNLMSDAFDVFIKMPK-------------------------------KDVVVWTKLI 188
YV+ + +A +F +MP+ KD+V W+ LI
Sbjct: 217 YVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALI 276
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
SGY ++ E+AL +F M +G + +E SV+ ACA L GK++HGL+I+ G
Sbjct: 277 SGYEQN-GMYEEALVMFIEMNANGMRL-DEVVVVSVLSACAHLSIVKTGKMIHGLVIRMG 334
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
E ++ ALI Y G G I DA+ +FN
Sbjct: 335 IESYVNLQNALIHMYSGS-------------------------------GEIMDAQKLFN 363
Query: 309 RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
+ IS+NSMI G G V+ ++ LF+ MP + I+S W++
Sbjct: 364 GSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVS-----------------WSA 406
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
+ISGY Q++ + L L+ M+ I + + AC+ L +L QG+ +HA++ K
Sbjct: 407 VISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNG 466
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
+ NV +GT+L+DMY +CG + +A F+ + V++W AL+ G + +GL ++ +F
Sbjct: 467 LKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFS 526
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
M ++PN TF+GVL AC GLV+EG F SM + +G+ P ++HY C+VDLLGR+
Sbjct: 527 EMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRA 586
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L+EAE+ I+ MP+ D WGALL AC + E+GER +K+ L +V+LS
Sbjct: 587 GLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLS 646
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NI+A G W +++R + V K PGCS IE N VH F D+ +P N + L
Sbjct: 647 NIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLN 706
Query: 668 HLTANL 673
+ L
Sbjct: 707 EMAKRL 712
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 216/413 (52%), Gaps = 21/413 (5%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV++N I G+ GQ++ A LF++M + +VSW+ ++ GY + ++E+L + M+
Sbjct: 238 IVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNA 297
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ ++L+E ++LS CA L+ + GK IH LV++ G E + + + L+ Y+ EI +
Sbjct: 298 NGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMD 357
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+++F+ H +++ W+ M+ G ++C + A +F MP+KD+V W+ +ISGYA+ D
Sbjct: 358 AQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQH-DC 416
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+ L LF M + G+ P+E SVI AC L A +GK VH + K G + + +G
Sbjct: 417 FSETLALFHEM-QLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGT 475
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----A 313
L++ Y C + A+ V++ +E +++ N+LI GL G +E + +F+ +
Sbjct: 476 TLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIP 535
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
N I++ ++ G VD+ + F M + I E N + M+
Sbjct: 536 NEITFMGVLGACRHMGLVDEGRCHFASMIEKHGI------------EPNVKHYGCMVDLL 583
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+ L +A +L +M +A D +T+ L AC G + G+ + L++
Sbjct: 584 GRAGLLNEAEKLIESM-PMAPD--VATWGALLGACKKHGDTEMGERVGRKLIE 633
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 183/447 (40%), Gaps = 118/447 (26%)
Query: 244 LIKCGFEFDESIGGALIEFYCGCE--AFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
+I GF D L++F D +++++DR+EN N+++ I E
Sbjct: 64 MILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAE 123
Query: 302 DAELIFNRLTEAN----SISY-----------------------------------NSMI 322
A L++ + + N + +Y N++I
Sbjct: 124 KALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLI 183
Query: 323 KGYAVYGQVDDSKRL-------------------------------FEKMPHRSIISLNT 351
YAV G + D+++L F++MP R+I++ N+
Sbjct: 184 NMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNS 243
Query: 352 MISVIPEM--------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
MI ++ +M E++ V+W+++ISGY QN ++E+AL +++ M +
Sbjct: 244 MIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLD 303
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS------------- 444
+ AC+ L ++ G+++H +++ ES V + +L+ MYS
Sbjct: 304 EVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFN 363
Query: 445 ------------------RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+CGS+ A+A F + ++ +W+A+++GY+ H SE + L
Sbjct: 364 GSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLAL 423
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
F M I P+ V V+SAC +++G + ++ G+ + T ++D+ +
Sbjct: 424 FHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMK 483
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALL 573
G + A E M E W AL+
Sbjct: 484 CGCVENALEVFNGME-EKGVSSWNALI 509
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 129/334 (38%), Gaps = 66/334 (19%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTML--------------- 56
M E+ + N I +G+++ A+ LF+ +SWN+M+
Sbjct: 333 MGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARAL 392
Query: 57 ----------------CGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSL 100
GY++ F E+L+L M ++ +ET +++S C L +L
Sbjct: 393 FDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAAL 452
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
GK +H + K+G + +G+ LL Y C +E A VF+ + E W+ +++G
Sbjct: 453 DQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGL 512
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
L+ + D+F +M V+ PNE T
Sbjct: 513 AVNGLVERSLDMFSEMKNNGVI---------------------------------PNEIT 539
Query: 221 FDSVIRACARLGAFCEGKVVHGLLI-KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
F V+ AC +G EG+ +I K G E + G +++ + A ++ + +
Sbjct: 540 FMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESM 599
Query: 280 E-NPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
P + +L+ G E E + +L E
Sbjct: 600 PMAPDVATWGALLGACKKHGDTEMGERVGRKLIE 633
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 204/638 (31%), Positives = 326/638 (51%), Gaps = 89/638 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A LFD MP R VVSWN M+ S+ + E+L +V M V+L+ TT+++ L+ CA+
Sbjct: 223 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR 282
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L+SL GKQ+H V+++ +V S L+ YA +EAK VF+ LH+ N
Sbjct: 283 LSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNN------ 336
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENM 215
V WT LISG+ + GC ++++LF MR +
Sbjct: 337 -------------------------VAWTVLISGFLQY--GCFTESVELFNQMRAELMTL 369
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+++ ++I C C G+ +H L +K G + +LI Y C+
Sbjct: 370 -DQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD-------- 420
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
++ AE IF + E + +S+ SMI Y+ G V ++
Sbjct: 421 -----------------------NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAR 457
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
F+ M E+N +TWN+M+ Y+Q+ E L++Y M L+ +
Sbjct: 458 EFFDGMS-----------------EKNVITWNAMLGAYIQHGAEEDGLRMYKVM--LSEE 498
Query: 396 RTRS---TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
R T+ LF C+ LG+ + G + VK + V +++ MYS+CG I +A
Sbjct: 499 YVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEA 558
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ F ++ ++ +W A++ GYS HG+G +A+ +F+ +L++ P+ ++V VLS C +
Sbjct: 559 RKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHS 618
Query: 513 GLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GLV EG F MK ++ + P LEH++C+VDLLGR+GHL EA++ I DMP++ A VWGA
Sbjct: 619 GLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGA 678
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
LLSAC N E+ E AA+ +F LD +Y++++ IYA GK IRK + +
Sbjct: 679 LLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGI 738
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
KK+PG SW+E++++VH F +D ++P I L+ L
Sbjct: 739 KKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDEL 776
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/576 (21%), Positives = 243/576 (42%), Gaps = 88/576 (15%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF-DE 144
F+ L C +L + +H ++ G F+ + LL Y +C + +A+R+ +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 65
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ N + ++ML GY + +SDA ++F +MP +DV W L+SGY +S +L+
Sbjct: 66 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYL-VSLET 124
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F M SG++ PN +T +++C LG + ++ K + D + AL++ +
Sbjct: 125 FLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFV 184
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG 324
C A D A R++ R++ P + NS++ G + ++ A +F+ + E + +S+N M+
Sbjct: 185 RCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 244
Query: 325 YAVYGQVDDS---------------------------------------KRLFEKMPH-- 343
+ G+V ++ ++ +PH
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID 304
Query: 344 ----RSIISLNTMISVIPEM--------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
+++ L E +RN V W +ISG++Q ++++L+ MR
Sbjct: 305 PYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 364
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC----- 446
+ + + L C L G+ LH+ +K+ V V SL+ MY++C
Sbjct: 365 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 424
Query: 447 --------------------------GSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
G++ A+ F +S NV W A++ Y HG
Sbjct: 425 AEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAE 484
Query: 481 SEAVLLFEIMLEQDIV-PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
+ + ++++ML ++ V P+ T+V + C G G +I G++
Sbjct: 485 EDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANA 544
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
V+ + + G + EA + + ++ D V W A+++
Sbjct: 545 VITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITG 579
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 159/324 (49%), Gaps = 5/324 (1%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
++G A+ +F+ + R V+W ++ G+ ++ F ES+ L + M + L++ +
Sbjct: 316 AKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALA 375
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
T++S C L G+Q+H L LKSG V + L+ YA C ++ A+ +F ++E
Sbjct: 376 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK 435
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ M+ Y Q ++ A + F M +K+V+ W ++ Y + E L++++ M
Sbjct: 436 DIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQH-GAEEDGLRMYKVM 494
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
P+ T+ ++ + CA LGA G + G +K G D S+ A+I Y C
Sbjct: 495 LSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGR 554
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN----RLTEANSISYNSMIKG 324
A +V+D L + + N++I G G + A IF+ R + + ISY +++ G
Sbjct: 555 ILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSG 614
Query: 325 YAVYGQVDDSKRLFEKMPHRSIIS 348
+ G V + K F+ M IS
Sbjct: 615 CSHSGLVQEGKFYFDMMKRAHNIS 638
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 17 LIVST---NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
LI+ T N IT + G+++ AR +FD + ++ +VSWN M+ GYS+ +++ +
Sbjct: 535 LIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFD 594
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
+ + K + ++ +LS C+ + +GK
Sbjct: 595 DILKRGAKPDYISYVAVLSGCSHSGLVQEGK 625
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 221/668 (33%), Positives = 341/668 (51%), Gaps = 85/668 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQM---PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-R 77
N ++ G+ G L A N+FD + I+ +VSWN+++ Y + + +L+L M R
Sbjct: 298 NAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTR 357
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + + IL CA L + + G+Q+H ++SG FVG+ ++ YA C ++EE
Sbjct: 358 HLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEE 417
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAK 193
A +VF + + + W+ M+ GY Q + A +F +M ++ DVV WT +I+GYA+
Sbjct: 418 ANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQ 477
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
GCE AL +FR M + G PN T S++ AC +GA GK
Sbjct: 478 RGQGCE-ALDVFRQMCDCGSR-PNVVTLVSLLSACVSVGALLHGK--------------- 520
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN-SLINGLISMGRIEDAELIFNRLTE 312
E +C A++ L+ P A + +INGLI M
Sbjct: 521 -------ETHCY------AIKFILNLDGPDPGADDLKVINGLIDM--------------- 552
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
YA + ++++F+ SV P+ +R+ VTW MI G
Sbjct: 553 ------------YAKCQSTEVARKMFD--------------SVSPK-DRDVVTWTVMIGG 585
Query: 373 YVQNNLHEKALQLYMTMRKL--AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
Y Q+ ALQL+ M K+ +I T S AC+ L +L+ G+ +HA++++ +
Sbjct: 586 YAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYG 645
Query: 431 S-NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
S ++V L+DMYS+ G ++ AQ F ++ N +WT+LM GY HG G +A+ +F+
Sbjct: 646 SVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDE 705
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSG 548
M + +VP+ TF+ VL AC +G+V+ G+ F M K +GV P EHY C+VDL GR+G
Sbjct: 706 MRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAG 765
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L EA + I +MP+E VVW ALLSAC N+E+GE AA ++ L+ +Y +LSN
Sbjct: 766 RLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSN 825
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
IYA +W IR + +KK PGCSWI+ V F V DR++P IY TL
Sbjct: 826 IYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLAD 885
Query: 669 LTANLNSV 676
L + ++
Sbjct: 886 LIQRIKAI 893
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 138/556 (24%), Positives = 234/556 (42%), Gaps = 99/556 (17%)
Query: 40 LFDQMPIR--TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQL 97
L +++P +V WN ++ + +L M + TF + CA L
Sbjct: 213 LLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANL 272
Query: 98 NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
+SL G +H V +SG+ FV + ++ Y C + A +FD+L
Sbjct: 273 SSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDL------------ 320
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
C+ +D+V W ++S Y + D AL LF M P+
Sbjct: 321 -----CH-----------RGIQDLVSWNSVVSAYMWASDA-NTALALFHKMTTRHLMSPD 363
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
+ +++ ACA L A G+ VHG I+ G D +G A+++ Y C + A +V+
Sbjct: 364 VISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQ 423
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIKGYAVYGQVDD 333
R++ + + N+++ G GR+E A +F R+TE N +++ ++I GYA GQ +
Sbjct: 424 RMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCE 483
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
+ +F +M N VT S++S
Sbjct: 484 ALDVFRQM-------------CDCGSRPNVVTLVSLLS---------------------- 508
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK--------TPFESNVYVGTSLVDMYSR 445
AC +G+L G+ H + +K P ++ V L+DMY++
Sbjct: 509 -------------ACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAK 555
Query: 446 CGSINDAQASFSSISSP--NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD--IVPNAAT 501
C S A+ F S+S +V WT ++ GY+ HG + A+ LF M + D I PN T
Sbjct: 556 CQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFT 615
Query: 502 FVGVLSACVRAGLVNEGMKI--FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
L AC R + G ++ + YG V L C++D+ +SG + A+ +
Sbjct: 616 LSCALVACARLAALRFGRQVHAYVLRNFYGSV-MLFVANCLIDMYSKSGDVDTAQIVFDN 674
Query: 560 MPIELDAVVWGALLSA 575
MP + +AV W +L++
Sbjct: 675 MP-QRNAVSWTSLMTG 689
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 206/671 (30%), Positives = 353/671 (52%), Gaps = 63/671 (9%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
TE +G+ V FD+M ++ VVSW ++L GY + +++L L S M +K N
Sbjct: 140 TESVEDGERV-----FDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPF 194
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TF+ +L A ++ G Q+H +V+KSG + FVG+ ++ Y+ + +AK VFD +
Sbjct: 195 TFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSM 254
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
N + W+ M+ G+V L +AF++F +M + + V T+ I
Sbjct: 255 ENRNAVSWNSMIAGFVTNGLDLEAFELFYRM-RLEGVKLTQTI----------------- 296
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
F +VI+ CA + K +H +IK G +FD +I AL+ Y
Sbjct: 297 ---------------FATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341
Query: 266 CEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIF----------NRLTEAN 314
C D A +++ + S ++I+G + GR + A +F N T +
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYST 401
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMP---------HRSIISLNTMISVIPEM-ERNPV 364
++ N+ + ++ V K +E P + I N + + E++ V
Sbjct: 402 ILTANAAVSPSQIHALV--VKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIV 459
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC-LGSLQQGQLLHAH 423
W++M+SGY Q E A+++++ + K ++ TFS + +AC+ S++QG+ H+
Sbjct: 460 AWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSC 519
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
+K+ F + + V ++LV MY++ G+I A F ++ +W ++++GY+ HG G ++
Sbjct: 520 SIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKS 579
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVD 542
+ +FE M +++ + TF+GV+SAC AGLVNEG + F M K Y +VPT+EHY+C+VD
Sbjct: 580 LKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVD 639
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISA 602
L R+G L +A + I MP A +W LL+AC +N+++GE AA+K+ L + +A
Sbjct: 640 LYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAA 699
Query: 603 YVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
YV+LSNIYA G W ++ +RK + +VKK+ G SWIE+ ++ +F D ++P + I
Sbjct: 700 YVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRI 759
Query: 663 YATLEHLTANL 673
Y LE L+ L
Sbjct: 760 YLKLEELSIRL 770
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 120/242 (49%), Gaps = 18/242 (7%)
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
S++LF++ P + + RN N ++ + +N+ +++AL L++ +R+
Sbjct: 45 SQQLFDETPQQG-------------LSRN----NHLLFEFSRNDQNKEALNLFLGLRRSG 87
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
S+ S + C CL G+ +H +K F +V VGTSLVDMY + S+ D +
Sbjct: 88 SPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGE 147
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F + NV +WT+L+ GY +GL +A+ LF M + I PN TF VL G
Sbjct: 148 RVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADG 207
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V +G+++ + G+ T+ +V++ +S + +A+ M +AV W +++
Sbjct: 208 AVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMI 266
Query: 574 SA 575
+
Sbjct: 267 AG 268
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 102/190 (53%), Gaps = 17/190 (8%)
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
S++ Y V+D +R+F++M +N V+W S+++GY QN L+
Sbjct: 132 SLVDMYMKTESVEDGERVFDEM-----------------RVKNVVSWTSLLAGYRQNGLN 174
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
E+AL+L+ M+ I TF+ + + G++++G +H ++K+ +S ++VG S+
Sbjct: 175 EQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSM 234
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
V+MYS+ ++DA+A F S+ + N +W +++ G+ +GL EA LF M + +
Sbjct: 235 VNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQ 294
Query: 500 ATFVGVLSAC 509
F V+ C
Sbjct: 295 TIFATVIKLC 304
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 193/660 (29%), Positives = 350/660 (53%), Gaps = 46/660 (6%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHC 108
+ +N +C + + ++ L++ + +++L T+ ++L +CA L S+ DG++IH
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHS 125
Query: 109 LVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD 168
++ + E +GS L+F Y C ++ E +R+FD++ + LW+L++ GY + +
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRE 185
Query: 169 AFDVFIKMPK------------------KDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ +F +M + +DV+ W +ISGY S EK L LF M
Sbjct: 186 SLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYV-SNGLSEKGLDLFEQMLL 244
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G N + T SV+ C+ G G+ +HG IK F + ++ L++ Y +
Sbjct: 245 LGINT-DLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLN 303
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA 326
A++V++ + + + S+I G G + + +F+ + + + + +++ A
Sbjct: 304 SAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACA 363
Query: 327 VYGQVDDSKRLFEKMPHRSIIS-----------------LNTMISVIPEME-RNPVTWNS 368
G +++ K + + + S + SV EM+ ++ V+WN+
Sbjct: 364 CTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNT 423
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
MI GY +N+L +AL L++ M+ + + T + + AC+ L +L++GQ +H H+++
Sbjct: 424 MIGGYSKNSLPNEALNLFVEMQYNSKPNS-ITMACILPACASLAALERGQEIHGHILRNG 482
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
F + +V +LVDMY +CG++ A+ F I ++ +WT ++ GY HG GSEA+ F
Sbjct: 483 FSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFN 542
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV-PTLEHYTCVVDLLGRS 547
M I P+ +F+ +L AC +GL++EG F M++ + P EHY C+VDLL R+
Sbjct: 543 EMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARA 602
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G+L +A +FIK MPIE DA +WGALL C + ++++ E+ A+ +F L+ + YV+L+
Sbjct: 603 GNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLA 662
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NIYA KW + +R+R+ ++K+PGCSWIE+ +VH F D ++P N I L+
Sbjct: 663 NIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLK 722
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 144/316 (45%), Gaps = 38/316 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++G L +A +F+ M R+VVSW +M+ GY++ D S+ L M + + + T +T
Sbjct: 298 KSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITT 357
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
IL CA L +GK +H + ++ + FV + L+ YA C + +A VF E+ +
Sbjct: 358 ILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKD 417
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ GY + +L ++A ++F++M
Sbjct: 418 IVSWNTMIGGYSKNSLPNEALNLFVEMQYN------------------------------ 447
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+ PN T ++ ACA L A G+ +HG +++ GF D + AL++ Y C A
Sbjct: 448 ----SKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGAL 503
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGY 325
A ++D + L + +I G G +A FN + E + +S+ S++
Sbjct: 504 GLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYAC 563
Query: 326 AVYGQVDDSKRLFEKM 341
+ G +D+ F M
Sbjct: 564 SHSGLLDEGWGFFNMM 579
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/466 (21%), Positives = 201/466 (43%), Gaps = 66/466 (14%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+AR LFD++ R V+SWN+M+ GY ++ L L M + + T ++++ C+
Sbjct: 203 SARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCS 262
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L+ G+ +H +K+ + + + LL Y+ + A +VF+ + E + + W+
Sbjct: 263 NTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTS 322
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
M+ GY + L + +F +M K+ +
Sbjct: 323 MIAGYAREGLSDMSVRLFHEMEKEGIS--------------------------------- 349
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ +T +++ ACA G GK VH + + + D + AL++ Y C + A V
Sbjct: 350 PDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSV 409
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---TEANSI----------SYNSMI 322
+ ++ + + N++I G +A +F + ++ NSI S ++
Sbjct: 410 FSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALE 469
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISL----------NTMISVIPEMERNPVTWNSMISG 372
+G ++G + + ++ +++ + + +IP E++ V+W MI+G
Sbjct: 470 RGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP--EKDLVSWTVMIAG 527
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG----QLLHAHLVKTP 428
Y + +A+ + MR I+ +F + +ACS G L +G ++ + P
Sbjct: 528 YGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEP 587
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG 473
+S Y +VD+ +R G+++ A + P+ W AL+ G
Sbjct: 588 -KSEHY--ACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 630
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 214/691 (30%), Positives = 349/691 (50%), Gaps = 93/691 (13%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPI-RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N + G G + AR +F++ R VSWN ++ Y K + +++ + M S
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
++ E FS +++ C ++ G+Q+H +V++ GY+ F + L+ Y ++ A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+F+ KMP DVV W LISG ++G +
Sbjct: 258 VIFE-------------------------------KMPDSDVVSWNALISGCV--LNGHD 284
Query: 200 -KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+A++L M+ SG +PN +T S+++AC+ GAF G+ +HG +IK + D+ IG
Sbjct: 285 HRAIELLLQMKYSGL-VPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVG 343
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----------N 308
L++ Y D A +V+D + + L N+LI+G GR ++A +F N
Sbjct: 344 LVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVN 403
Query: 309 RLT-----------EANSIS------------------YNSMIKGYAVYGQVDDSKRLFE 339
R T EA S + N +I Y + D+ R+FE
Sbjct: 404 RTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFE 463
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+ II+ +MI+ + + + E A++L+M M + ++
Sbjct: 464 ECSSGDIIACTSMITALSQCDHG-----------------EGAIKLFMEMLRKGLEPDPF 506
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
S L +AC+ L + +QG+ +HAHL+K F S+ + G +LV Y++CGSI DA+ +FSS+
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
V +W+A++ G + HG G A+ LF M+++ I PN T VL AC AGLV+E
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626
Query: 520 KIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
+ F SMK +G+ T EHY+C++DLLGR+G L +A E + MP + +A +WGALL A
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRV 686
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
+ E+G+ AA+K+F L+ + +V+L+N YA G W + +RK + +KK+P S
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMS 746
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
WIE+ +VH F V D+++P IYA L L
Sbjct: 747 WIEVKDKVHTFIVGDKSHPMTKEIYAKLVEL 777
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/606 (21%), Positives = 248/606 (40%), Gaps = 94/606 (15%)
Query: 10 TLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL 69
+L+ +L N I+ + + AR +FD++P VSW++++ YS ++
Sbjct: 29 SLLKSGSLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAI 88
Query: 70 SLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY 129
M V NE +L C L G Q+H + + +G+ FV + L+ Y
Sbjct: 89 QAFHGMRAEGVCCNEFALPVVLK-CVPDARL--GAQVHAMAMATGFGSDVFVANALVAMY 145
Query: 130 ANCFEIEEAKRVFDELH-EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
+++A+RVF+E E N + W+ ++ YV+ + DA VF +M VW+ +
Sbjct: 146 GGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM------VWSGI- 198
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
P E+ F V+ AC G+ VH ++++ G
Sbjct: 199 --------------------------QPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG 232
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI------------- 295
++ D AL++ Y D A +++++ + + + N+LI+G +
Sbjct: 233 YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 296 ----------------------SMGRIEDAELIFNRLTEANSISYN----SMIKGYAVYG 329
G + I + +AN+ S + ++ YA
Sbjct: 293 QMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNH 352
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
+DD++++F+ M HR +I N++ISG H++AL L+ +
Sbjct: 353 FLDDARKVFDWMFHRDLI-----------------LCNALISGCSHGGRHDEALSLFYEL 395
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
RK + R+T + + + + L + + +HA VK F + +V L+D Y +C +
Sbjct: 396 RKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCL 455
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+DA F SS ++ A T+++ S G A+ LF ML + + P+ +L+AC
Sbjct: 456 SDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 515
Query: 510 VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
+G ++ + + +V + G + +AE +P E V W
Sbjct: 516 ASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSW 574
Query: 570 GALLSA 575
A++
Sbjct: 575 SAMIGG 580
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/566 (21%), Positives = 232/566 (40%), Gaps = 104/566 (18%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M + + + N + + G++ A +F++MP VVSWN ++ G ++ L
Sbjct: 231 MGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIEL 290
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ M S + N T S+IL C+ + G+QIH ++K+ + +++G GL+ YA
Sbjct: 291 LLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+++A++VFD W M +D+++ LISG
Sbjct: 351 NHFLDDARKVFD---------W----------------------MFHRDLILCNALISGC 379
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
+ ++AL LF +R+ G + N T +V+++ A L A + VH L +K GF F
Sbjct: 380 SHGGRH-DEALSLFYELRKEGLGV-NRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF---- 307
D + LI+ Y C A RV++ + + A S+I L E A +F
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML 497
Query: 308 -----------------------------------NRLTEANSISYNSMIKGYAVYGQVD 332
R +++ + N+++ YA G ++
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 557
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
D++ F +P R ++S W++MI G Q+ ++AL+L+ M
Sbjct: 558 DAELAFSSLPERGVVS-----------------WSAMIGGLAQHGHGKRALELFGRMVDE 600
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSIND 451
I+ T + + AC+ G + + + + + + + ++D+ R G ++D
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660
Query: 452 AQASFSSIS-SPNVAAWTALMNGYSHH------GLGSEAVLLFEIMLEQDIVPNAATFVG 504
A +S+ N + W AL+ H L +E + + E + T V
Sbjct: 661 AMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILE-------PEKSGTHVL 713
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGV 530
+ + AG+ NE K+ + MK +
Sbjct: 714 LANTYASAGMWNEVAKVRKLMKDSNI 739
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 193/466 (41%), Gaps = 101/466 (21%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T S L+ A +L+ G +H +LKSG + L+ FY+ C A+RVFDE+
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEI 63
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKL 204
P V W+ L++ Y S +G + A++
Sbjct: 64 -------------------------------PDPCHVSWSSLVTAY--SNNGLPRSAIQA 90
Query: 205 FRWMRESGENMPNEYTFDSVIRAC--ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
F MR G NE+ V++ ARLGA VH + + GF D + AL+
Sbjct: 91 FHGMRAEGV-CCNEFALPVVLKCVPDARLGA-----QVHAMAMATGFGSDVFVANALVAM 144
Query: 263 YCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRLT---------- 311
Y G D A RV++ ++ S N L++ + + DA +F +
Sbjct: 145 YGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFG 204
Query: 312 -----------------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
+ + + N+++ Y G+VD + +FEKMP
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP 264
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
++S WN++ISG V N +A++L + M+ + T S
Sbjct: 265 DSDVVS-----------------WNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLS 307
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ ACS G+ G+ +H ++K +S+ Y+G LVDMY++ ++DA+ F +
Sbjct: 308 SILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR 367
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
++ AL++G SH G EA+ LF + ++ + N T VL +
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 9/199 (4%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
R+ T S + +L G LHA L+K+ S L+ YS+C A+
Sbjct: 2 RSAGTISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRV 59
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F I P +W++L+ YS++GL A+ F M + + N VL A L
Sbjct: 60 FDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL- 118
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G ++ + G + +V + G G + +A + E +AV W L+SA
Sbjct: 119 --GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
Query: 576 CWFWMNMEVGERAAQKMFG 594
+ N + G+ A ++FG
Sbjct: 177 --YVKNDQCGD--AIQVFG 191
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 214/684 (31%), Positives = 335/684 (48%), Gaps = 60/684 (8%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVS 73
++ + N + + + AR LFD+M +R VVSWN+++ YS E+L L S
Sbjct: 90 DSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFS 149
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M ++ V N TF+ L C + + G QIH +LKSG +V + L+ Y
Sbjct: 150 EMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFG 209
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++ EA +F L + + W+ ML G++Q L S+A + F + D+
Sbjct: 210 KMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADL------------ 257
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
P++ + S+I A RLG GK +H IK GF+ +
Sbjct: 258 ---------------------KPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNI 296
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRL----------------ENPCLNASNSLINGLISM 297
+G LI+ Y C R +D + +N C + L+ L
Sbjct: 297 LVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQME 356
Query: 298 GRIEDAELIFNRLTEANSISYNSMIK---GYAVYGQVDD---SKRLFEKMPHRSIISLNT 351
G DA +I + L ++ IK GY + G + D + + II +
Sbjct: 357 GMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGII--DY 414
Query: 352 MISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
+ + +E ++ V+W SMIS YV N L KAL+++ +M++ ++ T + A
Sbjct: 415 AVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCS 474
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L +L++G+ +H +++ F + +LVDMY+RCGS+ DA F+ + N+ WTA+
Sbjct: 475 LSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAM 534
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYG 529
++ Y HG G AV LF M ++ I+P+ TF+ +L AC +GLVNEG MK Y
Sbjct: 535 ISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQ 594
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ P EHYTC+VDLLGR L EA + +K M E VW ALL AC N E+GE AA
Sbjct: 595 LEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAA 654
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+K+ LD YV++SN++A G+W ++R R+ + K+PGCSWIE+ +++HAF
Sbjct: 655 EKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAF 714
Query: 650 SVEDRNNPNCNVIYATLEHLTANL 673
D+ +P C+ IY L +T L
Sbjct: 715 LSRDKLHPECDKIYQKLAQVTEKL 738
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 142/569 (24%), Positives = 254/569 (44%), Gaps = 56/569 (9%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G ++ A +FD+M R++ +WN M+ GY + +L + M V + TF
Sbjct: 3 GKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFP 62
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L C + L G +IH L +K G + F FV + L+ YA C +I A+++FD ++
Sbjct: 63 VLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVR 122
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N DVV W +IS Y+ + C +AL LF M
Sbjct: 123 N------------------------------DVVSWNSIISAYSGN-GMCTEALCLFSEM 151
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
++G + N YTF + ++AC G +H ++K G D + AL+ Y
Sbjct: 152 LKAGV-VTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGK 210
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKG 324
A ++ LE + NS++ G I G +A F L A + +S S+I
Sbjct: 211 MPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVA 270
Query: 325 YAVYGQVDDSKRL----FEKMPHRSIISLNTMISVIPE--------------MERNPVTW 366
G + + K + + +I+ NT+I + + ++ ++W
Sbjct: 271 SGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISW 330
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+ +GY QN + +AL+L ++ +D + + AC L L + + +H + ++
Sbjct: 331 TTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIR 390
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
V T ++D+Y CG I+ A F SI +V +WT++++ Y H+GL ++A+ +
Sbjct: 391 GGLSDPVLQNT-IIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEV 449
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
F M E + P+ T V +LSA + +G +I + G + +VD+ R
Sbjct: 450 FSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYAR 509
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + +A + I + ++W A++SA
Sbjct: 510 CGSVEDAYK-IFTCTKNRNLILWTAMISA 537
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 231/478 (48%), Gaps = 35/478 (7%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y +C + DA +F KM ++ + W ++ GY + + AL+++R MR G + + Y
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEAL-GALEMYREMRHLGVSF-DSY 59
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
TF +++AC + G +HGL IK G + + +L+ Y C +GA +++DR+
Sbjct: 60 TFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119
Query: 280 --ENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY-------------NSMIK- 323
N + + NS+I+ G +A +F+ + +A ++ +S IK
Sbjct: 120 YVRNDVV-SWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKL 178
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQ 375
G ++ + S R+ + +++++ +PE ++ VTWNSM++G++Q
Sbjct: 179 GMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQ 238
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N L+ +AL+ + ++ + + + + A LG L G+ +HA+ +K F+SN+ V
Sbjct: 239 NGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILV 298
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
G +L+DMY++C ++ +F ++ ++ +WT GY+ + +A+ L + + +
Sbjct: 299 GNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGM 358
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV-PTLEHYTCVVDLLGRSGHLHEAE 554
+A +L AC + + +I G+ P L++ ++D+ G G + A
Sbjct: 359 DVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIIDYAV 416
Query: 555 EFIKDMPIELDAVVWGALLSACWF---WMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
+ + + D V W +++S C+ N + ++ K GL+ ++ ILS +
Sbjct: 417 RIFESIECK-DVVSWTSMIS-CYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAV 472
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY +CGS+ DA+ F +S ++ W A+M GY +G A+ ++ M + ++ T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 502 FVGVLSACVRAGLVNE---GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
F +L AC G+V + G +I YG + +V L + ++ A +
Sbjct: 61 FPVLLKAC---GIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFD 117
Query: 559 DMPIELDAVVWGALLSA 575
M + D V W +++SA
Sbjct: 118 RMYVRNDVVSWNSIISA 134
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/566 (34%), Positives = 318/566 (56%), Gaps = 64/566 (11%)
Query: 129 YANCFEIEEAKRVFDELH-EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKL 187
Y C IEEA+R+FD + + N + W+ M+ GY++ N +SDA +F +MP K+VV W +
Sbjct: 93 YIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTM 152
Query: 188 ISGYAKSVDGCEKALKLFRWMRESGENMP--NEYTFDSVIRACARLGAFCEGKVVHGLLI 245
I GYA++ + A+ LF E MP N ++++V+ +L
Sbjct: 153 IDGYAQN-GRIDSAMYLF-------EKMPERNVVSWNTVM----------------SMLA 188
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
+CG + A R++DR+ + + ++I GL GRI++A L
Sbjct: 189 QCG-------------------RIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARL 229
Query: 306 IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS----------- 354
+F+R+ E N +S+N+MI GYA ++D++ LFE+MP R + S NTMI+
Sbjct: 230 LFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRA 289
Query: 355 --VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL-AIDRTRSTFSVLFHACSC 410
+ EM ++N ++W +MI+G VQ E+AL+++ M + TF + ACS
Sbjct: 290 RKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSN 349
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS--ISSPNVAAWT 468
L L +GQ +H + KT ++ + +V ++L++MYS+CG + A+ F S ++ +W
Sbjct: 350 LAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWN 409
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KS 527
++ Y+HHG G EA+ F+ M + P+ T+VG+LSAC AGLV EG+K F + K
Sbjct: 410 GIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKD 469
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
++ +HY C+VDL GR+G L EA FI+ + + A VWGALL+ C N+++G++
Sbjct: 470 RSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQ 529
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVH 647
AA+K+ ++ + Y++LSNIYA GKW + +R ++ +KK PGCSWIE+ +RVH
Sbjct: 530 AAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVH 589
Query: 648 AFSVEDRNNPNCNVIYATLEHLTANL 673
F V D+++ +IY+ L L + +
Sbjct: 590 VFVVGDKSHSQSKLIYSLLRDLHSKM 615
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 122/525 (23%), Positives = 231/525 (44%), Gaps = 102/525 (19%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R+ ++ A LF++MP + VVSWNTM+ GY++ + D ++ L M NV +++T
Sbjct: 127 RSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV----VSWNT 182
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
++S+ AQ C IEEA+R+FD + E +
Sbjct: 183 VMSMLAQ-----------------------------------CGRIEEARRLFDRMPERD 207
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ G + + +A +F +MP+++VV W +I+GYA+++ ++AL LF
Sbjct: 208 VISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLR-LDEALDLF---- 262
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF---YCGC 266
E MP R G + +G L + F+E +I + GC
Sbjct: 263 ---ERMPE--------RDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGC 311
Query: 267 ---EAFDGAMRVYDRL-----ENPCLNASNSLING---LISMGRIEDAELIFNR-LTEAN 314
+ A++++ R+ P S++ L +G + I ++ + + +
Sbjct: 312 VQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDS 371
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
+ +++I Y+ G++ ++++F+ + M S +R+ V+WN +I+ Y
Sbjct: 372 TFVVSALINMYSKCGELGTARKMFD----------DGMTS-----QRDLVSWNGIIAAYA 416
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
+ ++A+ + MRK T+ L ACS G +++G LVK + ++
Sbjct: 417 HHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVK---DRSIL 473
Query: 435 VGTS----LVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGYSHHG---LGSEAV-L 485
V LVD+ R G + +A + + P+ W AL+ G + H +G +A
Sbjct: 474 VREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKK 533
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
L E+ E NA T++ + + G E ++ MK G+
Sbjct: 534 LLEVEPE-----NAGTYLLLSNIYASTGKWREAARVRLKMKDKGL 573
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 140/290 (48%), Gaps = 35/290 (12%)
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N +I L GRI +A +F+ + E + I++ ++I GY G +++++RLF+++
Sbjct: 56 NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRV------ 109
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
+ ++N VTW +M+ GY+++N A +L+ M +V+
Sbjct: 110 ----------DAKKNVVTWTAMVGGYIRSNKISDAEKLFNEM---------PNKNVVSWN 150
Query: 408 CSCLGSLQQGQLLHA-HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
G Q G++ A +L + E NV +++ M ++CG I +A+ F + +V +
Sbjct: 151 TMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVIS 210
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
WTA++ G S +G EA LLF+ M E+++V A G ++E + +F M
Sbjct: 211 WTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNL----RLDEALDLFERMP 266
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
L + ++ L ++G L A + +MP + + + W +++ C
Sbjct: 267 ER----DLPSWNTMITGLIQNGDLRRARKLFNEMP-KKNVISWTTMITGC 311
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ NV ++ S+ G I +A+ F + P+V WT +++GY G+ EA LF+
Sbjct: 49 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR 108
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
+ D N T+ ++ +R+ +++ K+F M + VV + ++D ++G
Sbjct: 109 V---DAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVV----SWNTMIDGYAQNGR 161
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE-RAAQKMFGLDKKPISAYVILSN 608
+ A + MP E + V W ++S M + G A+++F D+ P + +
Sbjct: 162 IDSAMYLFEKMP-ERNVVSWNTVMS-----MLAQCGRIEEARRLF--DRMPERDVISWTA 213
Query: 609 IYAVLGKWGK 618
+ A L K G+
Sbjct: 214 MIAGLSKNGR 223
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 214/691 (30%), Positives = 349/691 (50%), Gaps = 93/691 (13%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPI-RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N + G G + AR +F++ R VSWN ++ Y K + +++ + M S
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
++ E FS +++ C ++ G+Q+H +V++ GY+ F + L+ Y ++ A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+F+ KMP DVV W LISG ++G +
Sbjct: 258 VIFE-------------------------------KMPDSDVVSWNALISGCV--LNGHD 284
Query: 200 -KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+A++L M+ SG +PN +T S+++AC+ GAF G+ +HG +IK + D+ IG
Sbjct: 285 HRAIELLLQMKYSGL-VPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVG 343
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----------N 308
L++ Y D A +V+D + + L N+LI+G GR ++A +F N
Sbjct: 344 LVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVN 403
Query: 309 RLT-----------EANSIS------------------YNSMIKGYAVYGQVDDSKRLFE 339
R T EA S + N +I Y + D+ R+FE
Sbjct: 404 RTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFE 463
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+ II+ +MI+ + + + E A++L+M M + ++
Sbjct: 464 ECSSGDIIACTSMITALSQCDHG-----------------EGAIKLFMEMLRKGLEPDPF 506
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
S L +AC+ L + +QG+ +HAHL+K F S+ + G +LV Y++CGSI DA+ +FSS+
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
V +W+A++ G + HG G A+ LF M+++ I PN T VL AC AGLV+E
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626
Query: 520 KIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
+ F SMK +G+ T EHY+C++DLLGR+G L +A E + MP + +A +WGALL A
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRV 686
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
+ E+G+ AA+K+F L+ + +V+L+N YA G W + +RK + +KK+P S
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMS 746
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
WIE+ +VH F V D+++P IYA L L
Sbjct: 747 WIEVKDKVHTFIVGDKSHPMTKEIYAKLVEL 777
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 132/606 (21%), Positives = 245/606 (40%), Gaps = 94/606 (15%)
Query: 10 TLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL 69
+L+ +L N I+ + + AR FD++P VSW++++ YS ++
Sbjct: 29 SLLKSGSLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAI 88
Query: 70 SLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY 129
M V NE +L C L G Q+H + + +G+ FV + L+ Y
Sbjct: 89 QAFHGMRAEGVCCNEFALPVVLK-CVPDARL--GAQVHAMAMATGFGSDVFVANALVAMY 145
Query: 130 ANCFEIEEAKRVFDELH-EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
+++A+RVF+E E N + W+ ++ YV+ + DA VF +M VW+ +
Sbjct: 146 GGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM------VWSGI- 198
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
P E+ F V+ AC G+ VH ++++ G
Sbjct: 199 --------------------------QPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG 232
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-EL-- 305
++ D AL++ Y D A +++++ + + + N+LI+G + G A EL
Sbjct: 233 YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 306 ----------------IFNRLTEANSISYNSMIKGYAVYGQ------------------- 330
I + A + I G+ +
Sbjct: 293 QMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNH 352
Query: 331 -VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
+DD++++F+ M HR +I N++ISG H++AL L+ +
Sbjct: 353 FLDDARKVFDWMFHRDLI-----------------LCNALISGCSHGGRHDEALSLFYEL 395
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
RK + R+T + + + + L + + +HA VK F + +V L+D Y +C +
Sbjct: 396 RKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCL 455
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+DA F SS ++ A T+++ S G A+ LF ML + + P+ +L+AC
Sbjct: 456 SDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 515
Query: 510 VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
+G ++ + + +V + G + +AE +P E V W
Sbjct: 516 ASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSW 574
Query: 570 GALLSA 575
A++
Sbjct: 575 SAMIGG 580
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 124/566 (21%), Positives = 232/566 (40%), Gaps = 104/566 (18%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M + + + N + + G++ A +F++MP VVSWN ++ G ++ L
Sbjct: 231 MGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIEL 290
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ M S + N T S+IL C+ + G+QIH ++K+ + +++G GL+ YA
Sbjct: 291 LLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+++A++VFD W M +D+++ LISG
Sbjct: 351 NHFLDDARKVFD---------W----------------------MFHRDLILCNALISGC 379
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
+ ++AL LF +R+ G + N T +V+++ A L A + VH L +K GF F
Sbjct: 380 SHGGRH-DEALSLFYELRKEGLGV-NRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF---- 307
D + LI+ Y C A RV++ + + A S+I L E A +F
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML 497
Query: 308 -----------------------------------NRLTEANSISYNSMIKGYAVYGQVD 332
R +++ + N+++ YA G ++
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 557
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
D++ F +P R ++S W++MI G Q+ ++AL+L+ M
Sbjct: 558 DAELAFSSLPERGVVS-----------------WSAMIGGLAQHGHGKRALELFGRMVDE 600
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSIND 451
I+ T + + AC+ G + + + + + + + ++D+ R G ++D
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660
Query: 452 AQASFSSIS-SPNVAAWTALMNGYSHH------GLGSEAVLLFEIMLEQDIVPNAATFVG 504
A +S+ N + W AL+ H L +E + + E + T V
Sbjct: 661 AMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILE-------PEKSGTHVL 713
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGV 530
+ + AG+ NE K+ + MK +
Sbjct: 714 LANTYASAGMWNEVAKVRKLMKDSNI 739
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 190/465 (40%), Gaps = 99/465 (21%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T S L+ A +L+ G +H +LKSG + L+ FY+ C A+R FDE+
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEI 63
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ + WS ++ Y L P+ A++ F
Sbjct: 64 PDPCHVSWSSLVTAYSNNGL-----------PRS---------------------AIQAF 91
Query: 206 RWMRESGENMPNEYTFDSVIRAC--ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
MR G NE+ V++ ARLGA VH + + GF D + AL+ Y
Sbjct: 92 HGMRAEGV-CCNEFALPVVLKCVPDARLGA-----QVHAMAMATGFGSDVFVANALVAMY 145
Query: 264 CGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRLT----------- 311
G D A RV++ ++ S N L++ + + DA +F +
Sbjct: 146 GGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGF 205
Query: 312 ----------------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+ + + N+++ Y G+VD + +FEKMP
Sbjct: 206 SCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPD 265
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
++S WN++ISG V N +A++L + M+ + T S
Sbjct: 266 SDVVS-----------------WNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSS 308
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ ACS G+ G+ +H ++K +S+ Y+G LVDMY++ ++DA+ F + +
Sbjct: 309 ILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRD 368
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+ AL++G SH G EA+ LF + ++ + N T VL +
Sbjct: 369 LILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 9/199 (4%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
R+ T S + +L G LHA L+K+ S L+ YS+C A+
Sbjct: 2 RSAGTISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRF 59
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F I P +W++L+ YS++GL A+ F M + + N VL A L
Sbjct: 60 FDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL- 118
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G ++ + G + +V + G G + +A + E +AV W L+SA
Sbjct: 119 --GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
Query: 576 CWFWMNMEVGERAAQKMFG 594
+ N + G+ A ++FG
Sbjct: 177 --YVKNDQCGD--AIQVFG 191
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/507 (36%), Positives = 278/507 (54%), Gaps = 35/507 (6%)
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDG--CEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
VF +MP+ + W ++ A++ D +AL LF M G PN +TF SV++ACA
Sbjct: 74 VFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACA 133
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
R EGK +HGL++K GF DE + L+ Y C + A ++ C N +
Sbjct: 134 RASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLF------CKNVVD- 186
Query: 290 LINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
+G M + R + N + +N MI G G + +K LF++MP RS++S
Sbjct: 187 -FDGSCQME-------LDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVS- 237
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
WN MISGY QN +A+ L+ M+ ID T + A +
Sbjct: 238 ----------------WNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIA 281
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+G+L+ G+ +H + K E + +G++LVDMYS+CGSI++A F ++ N W+A
Sbjct: 282 RIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSA 341
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSY 528
++ ++ HG +A++ F +M + + PN ++G+LSAC AGLV EG F M K
Sbjct: 342 IIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVV 401
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P +EHY C+VDLLGR+GHL EAEE I++MPIE D V+W ALL AC N+++GER
Sbjct: 402 GLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERV 461
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A+ + L +YV LSN+YA LG W +R ++ ++++KDPGCSWIE++ +H
Sbjct: 462 AETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHE 521
Query: 649 FSVEDRNNPNCNVIYATLEHLTANLNS 675
F VED ++ I A L ++ L S
Sbjct: 522 FLVEDDSHSKAKEIQAMLGEMSMKLRS 548
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 233/473 (49%), Gaps = 47/473 (9%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVT-ARNLFDQMPIRTVVSWNTMLCGYS 60
+L+A +T Q+ L + + I C + + + AR +F QMP WNT+L +
Sbjct: 37 QLHAIFIKTGQIQDPLTAA--EVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRVLA 94
Query: 61 KWAK---FDESLSLVSTMH-RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYE 116
+ E+L L S M VK N TF ++L CA+ + L +GKQIH L++K G+
Sbjct: 95 ETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFH 154
Query: 117 CFEFVGSGLLFFYANCFEIEEAKRVF---------------DELHED-NELLWSLMLVGY 160
EFV S L+ Y C +E+A +F D+ +D N +LW++M+ G
Sbjct: 155 EDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQ 214
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
V+ + A ++F +MP++ VV W +ISGYA++ E A+ LF+ M+ S + PN T
Sbjct: 215 VRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIE-AINLFQEMQSSNID-PNYVT 272
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
SV+ A AR+GA GK +H K E D+ +G AL++ Y C + D A++V++ L
Sbjct: 273 LVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLP 332
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKR 336
+++I GR EDA + F+ + +A N ++Y ++ + G V++ +
Sbjct: 333 KRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRS 392
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
F M ++ + P +E + M+ + E+A +L +R + I+
Sbjct: 393 FFSHMV--------KVVGLQPRIEH----YGCMVDLLGRAGHLEEAEEL---IRNMPIEP 437
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGS 448
+ L AC +L+ G+ + L++ P +S YV +L ++Y+ G+
Sbjct: 438 DDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYV--ALSNLYASLGN 488
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 132/332 (39%), Gaps = 78/332 (23%)
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
I G+I+D LT A I + + +D ++ +F +MP + NT++
Sbjct: 42 FIKTGQIQDP------LTAAEVIKFCAFSSR-----DIDYARAVFRQMPEPNCFCWNTIL 90
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR-KLAIDRTRSTFSVLFHACSCLG 412
V+ E +L +AL L+ M + R TF + AC+
Sbjct: 91 RVLAETN--------------DEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARAS 136
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC-------------------------- 446
L++G+ +H +VK F + +V ++LV MY C
Sbjct: 137 RLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELD 196
Query: 447 ---------------------GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
G I A+ F + +V +W +++GY+ +G EA+
Sbjct: 197 KRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAIN 256
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG--MKIFRSMKSYGVVPTLEHYTCVVDL 543
LF+ M +I PN T V VL A R G + G + ++ + L + +VD+
Sbjct: 257 LFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLG--SALVDM 314
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G + EA + + +P + +A+ W A++ A
Sbjct: 315 YSKCGSIDEALQVFETLP-KRNAITWSAIIGA 345
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 206/622 (33%), Positives = 326/622 (52%), Gaps = 65/622 (10%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
+ + ++ A+ L GKQ+H L++ +GY F+ + L+ Y+ C E++ A ++F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
D MP++++V WT +ISG +++ E A+
Sbjct: 64 D-------------------------------TMPQRNLVSWTAMISGLSQNSKFSE-AI 91
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
+ F MR GE +P ++ F S IRACA LG+ GK +H L +K G + +G L +
Sbjct: 92 RTFCGMRICGE-VPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDM 150
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASN--SLINGLISMGRIEDAELIFNRLT-EANSISYN 319
Y C A A +V++ E PC + + ++I+G +G E+A L F ++ E +I +
Sbjct: 151 YSKCGAMFDACKVFE--EMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQH 208
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSII------------SLNTMISVIPEME------- 360
+ G + K F + H S++ +L M S +ME
Sbjct: 209 VLCSTLGACGALKACK--FGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFG 266
Query: 361 -----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
RN V++ +I GYV+ EK L +++ +R+ I+ TFS L AC+ +L+
Sbjct: 267 IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALE 326
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
QG LHA ++K F+ + +V + LVDMY +CG + A +F I P AW +L++ +
Sbjct: 327 QGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFG 386
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTL 534
HGLG +A+ FE M+++ + PNA TF+ +L+ C AGLV EG+ F SM K+YGVVP
Sbjct: 387 QHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGE 446
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY+CV+DLLGR+G L EA+EFI MP E +A W + L AC + E+G+ AA+K+
Sbjct: 447 EHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVK 506
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
L+ K A V+LSNIYA +W +R R+ VKK PG SW+++ + H F ED
Sbjct: 507 LEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDW 566
Query: 655 NNPNCNVIYATLEHLTANLNSV 676
++ + IY L+ L + +
Sbjct: 567 SHXRKSAIYEKLDXLLDQIKAA 588
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 212/487 (43%), Gaps = 66/487 (13%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
TN + + G+L A LFD MP R +VSW M+ G S+ +KF E++ M
Sbjct: 43 TNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGE 102
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ FS+ + CA L S+ GKQ+HCL LK G FVGS L Y+ C + +A +
Sbjct: 103 VPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACK 162
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF+E+ +E+ W+ M+ GY + +A F KM ++V +
Sbjct: 163 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTI----------------- 205
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
+++ S + AC L A G+ VH ++K GFE D +G AL
Sbjct: 206 ----------------DQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALT 249
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLN--ASNSLINGLISMGRIEDAELIFNRL----TEAN 314
+ Y + A V+ +++ C N + LI+G + +IE +F L E N
Sbjct: 250 DMYSKAGDMESASNVFG-IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPN 308
Query: 315 SISYNSMIKGYAVYGQVDDSKRL--------FEKMPHRSII---------SLNTMISVIP 357
+++S+IK A ++ +L F++ P S I L I
Sbjct: 309 EFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFD 368
Query: 358 EM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
E+ + + WNS++S + Q+ L + A++ + M + TF L CS G +++
Sbjct: 369 EIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEE 428
Query: 417 GQLLHAHLVKT----PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
G + KT P E + + ++D+ R G + +A+ + + PN W + +
Sbjct: 429 GLDYFYSMDKTYGVVPGEEHY---SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485
Query: 472 NGYSHHG 478
HG
Sbjct: 486 GACRIHG 492
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 209/674 (31%), Positives = 348/674 (51%), Gaps = 62/674 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFS 88
R G LV A +F +M R + SWN ++ GY+K FDE++ L M VK + TF
Sbjct: 141 RFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFP 200
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L C + L GK++H V++ GYE V + L+ Y C +++ A+ +FD
Sbjct: 201 CVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD----- 255
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+MP++D++ W +ISGY ++ C + L+LF M
Sbjct: 256 --------------------------RMPRRDIISWNAMISGYFEN-GMCHEGLELFFAM 288
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
R + P+ T SVI AC LG G+ +H +I GF D S+ +L + Y +
Sbjct: 289 RGLSVD-PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGS 347
Query: 269 FDGAMRVYDRLENPCLNASNSLING----LISMGRIEDAELIFNRLTEANSISYNSMIKG 324
+ A +++ R+E + + ++I+G + I+ ++ + + I+ +++
Sbjct: 348 WREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSA 407
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISL----NTMISV----------------IPEMERNPV 364
A G +D L + +IS N +I++ IP +N +
Sbjct: 408 CATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR--KNVI 465
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+W S+I+G NN +AL +++ K+ + T + AC+ +G+L G+ +HAH+
Sbjct: 466 SWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHV 524
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
++T + ++ +L+DMY RCG +N A + F+S +V +W L+ GYS G GS V
Sbjct: 525 LRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVV 583
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
LF+ M++ + P+ TF+ +L C ++ +V +G+ F M+ YGV P L+HY CVVDLL
Sbjct: 584 ELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLL 643
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L EA +FI+ MP+ D VWGALL+AC +++GE +AQ +F LDKK + Y+
Sbjct: 644 GRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYI 703
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+L N+YA GKW + +R+ + + D GCSW+E+ +VHAF +D+ +P I
Sbjct: 704 LLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINT 763
Query: 665 TLEHLTANLNSVVL 678
LE ++ V L
Sbjct: 764 VLEGFYEKMSEVGL 777
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 137/552 (24%), Positives = 232/552 (42%), Gaps = 91/552 (16%)
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
K +E++ L+++M V ++E F ++ +C + +G +++ + L S
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSM-------- 124
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
S L N F L +V+ + DA+ VF KM ++++
Sbjct: 125 SSLGVELGNAF-----------------------LAMFVRFGNLVDAWYVFGKMSERNLF 161
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W L+ GYAK ++A+ L+ M G P+ YTF V+R C + GK VH
Sbjct: 162 SWNVLVGGYAKQ-GYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHV 220
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR--- 299
+++ G+E D + ALI Y C A ++DR+ + + N++I+G G
Sbjct: 221 HVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHE 280
Query: 300 -----------------------IEDAELIFNRLTEANSISY-------------NSMIK 323
I EL+ +R + +Y NS+ +
Sbjct: 281 GLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQ 340
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
Y G ++++LF +M + I+S W +MISGY N L +KA+
Sbjct: 341 MYLNAGSWREAEKLFSRMERKDIVS-----------------WTTMISGYEYNFLPDKAI 383
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
Y M + ++ T + + AC+ LG L G LH +K S V V +L++MY
Sbjct: 384 DTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMY 443
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
S+C I+ A F +I NV +WT+++ G + EA L+F ++ + PNA T
Sbjct: 444 SKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA-LIFLRQMKMTLQPNAITLT 502
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
L+AC R G + G +I + GV ++D+ R G ++ A +
Sbjct: 503 AALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ--K 560
Query: 564 LDAVVWGALLSA 575
D W LL+
Sbjct: 561 KDVTSWNILLTG 572
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 127/536 (23%), Positives = 218/536 (40%), Gaps = 65/536 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N IT + G + +AR LFD+MP R ++SWN M+ GY + E L L M +V
Sbjct: 234 VNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSV 293
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ T ++++S C L G+ IH V+ +G+ V + L Y N EA++
Sbjct: 294 DPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEK 353
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+F + + + W+ M+ GY + N + D K
Sbjct: 354 LFSRMERKDIVSWTTMISGY-EYNFLPD-------------------------------K 381
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
A+ +R M + P+E T +V+ ACA LG G +H L IK + LI
Sbjct: 382 AIDTYRMMDQDSVK-PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 440
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN------ 314
Y C+ D A+ ++ + + + S+I GL R +A LIF R +
Sbjct: 441 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA-LIFLRQMKMTLQPNAI 499
Query: 315 --------SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS-------LNTMISVIPEM 359
+++ G ++ V + + +++ +NT S
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ 559
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
+++ +WN +++GY + ++L+ M K + TF L CS ++QG +
Sbjct: 560 KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLM 619
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYS-HH 477
+ + N+ +VD+ R G + +A + +P+ A W AL+N HH
Sbjct: 620 YFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHH 679
Query: 478 --GLGS-EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
LG A +FE L++ V + + C G E K+ R MK G+
Sbjct: 680 KIDLGELSAQHIFE--LDKKSVGYYILLCNLYADC---GKWREVAKVRRMMKENGL 730
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 2/207 (0%)
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ G N E+A++L +M++L + F L C + ++G +++ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
V +G + + M+ R G++ DA F +S N+ +W L+ GY+ G EA+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 490 ML-EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548
ML + P+ TF VL C + G ++ + YG ++ ++ + + G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSA 575
+ A MP D + W A++S
Sbjct: 246 DVKSARLLFDRMP-RRDIISWNAMISG 271
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 210/645 (32%), Positives = 344/645 (53%), Gaps = 58/645 (8%)
Query: 55 MLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG 114
ML GY+K + D +LS S M +V+ F+ +L +C + L GK+IH V+ SG
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 115 YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI 174
+ F +G++ YA C +I +DA+++F
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQI-------------------------------NDAYNMFD 89
Query: 175 KMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
+MP++D+V W +ISGYA+ +G K AL L M E G P+ T S++ A A
Sbjct: 90 RMPERDLVCWNTMISGYAQ--NGFAKVALMLVLRMSEEGHR-PDSITIVSILPAVADTRL 146
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
G VHG +++ GFE ++ AL++ Y C + A ++D +++ + + NS+I+G
Sbjct: 147 LRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDG 206
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGY----AVYGQVDDSK---RLFEKMPHRSI 346
+ G E A LIF ++ + N + G A G ++ K +L +++ S
Sbjct: 207 YVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSD 266
Query: 347 IS-LNTMISVIPEMER--------------NPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
+S +N++IS+ + +R V+WN+MI GY QN +AL + M+
Sbjct: 267 VSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQS 326
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
I T + A + L +Q + +H +++ + NV+V T+LVDMY++CG+I+
Sbjct: 327 RNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHT 386
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A+ F +++ +V W A+++GY HGLG +V LF+ M + I PN TF+ LSAC
Sbjct: 387 ARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSH 446
Query: 512 AGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
+GLV EG+ F SMK YG+ PT++HY +VDLLGR+G L++A +FI+ MPI+ V+G
Sbjct: 447 SGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYG 506
Query: 571 ALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630
A+L AC N+++GE+AA ++F L+ +V+L+NIYA WGK +R +
Sbjct: 507 AMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSG 566
Query: 631 VKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
++K PGCS +E+ + VH+F ++P IY+ LE L + +
Sbjct: 567 LQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRA 611
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 203/501 (40%), Gaps = 96/501 (19%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
Q+ A N+FD+MP R +V WNTM+ GY++ +L LV M + + T +IL
Sbjct: 80 QINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILP 139
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
A L G +H VL++G+E V + L+ Y+ C + A+ +FD + +
Sbjct: 140 AVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVS 199
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
W+ M+ GYVQ SG A E A+ +F+ M + G
Sbjct: 200 WNSMIDGYVQ--------------------------SGDA------EGAMLIFQKMLDEG 227
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
P T + ACA LG GK VH L+ + + D S+ +LI Y C+ D A
Sbjct: 228 VQ-PTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIA 286
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDA----------------------------- 303
++ L N L + N++I G G + +A
Sbjct: 287 ADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAEL 346
Query: 304 ----------ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
L+ R + N +++ YA G + +++LF+ M R +I
Sbjct: 347 SIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVI------ 400
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
TWN+MI GY + L + +++L+ M+K I TF ACS G
Sbjct: 401 -----------TWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGL 449
Query: 414 LQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
+++G + K E + ++VD+ R G +N A + P + + A++
Sbjct: 450 VEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAML 509
Query: 472 NGYSHH---GLGSEAVLLFEI 489
H LG +A FEI
Sbjct: 510 GACKIHKNVDLGEKAA--FEI 528
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 162/404 (40%), Gaps = 78/404 (19%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+L+ + + + G + AR +FD M RTVVSWN+M+ GY + + ++ +
Sbjct: 163 ESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQK 222
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M V+ T L CA L L GK +H LV + + V + L+ Y+ C
Sbjct: 223 MLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKR 282
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
++ A +F L + W+ M++GY Q +++A + F +M +++
Sbjct: 283 VDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNI------------- 329
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
P+ +T SVI A A L + K +HGL+I+ + +
Sbjct: 330 --------------------KPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVF 369
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+ AL++ Y C A I A +F+ + +
Sbjct: 370 VMTALVDMYAKCGA-------------------------------IHTARKLFDMMNARH 398
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
I++N+MI GY +G S LF++M +I + N +T+ +S
Sbjct: 399 VITWNAMIDGYGTHGLGKTSVELFKEMKKGTI-------------KPNDITFLCALSACS 445
Query: 375 QNNLHEKALQLYMTMRK-LAIDRTRSTFSVLFHACSCLGSLQQG 417
+ L E+ L + +M+K I+ T + + G L Q
Sbjct: 446 HSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQA 489
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 196/675 (29%), Positives = 347/675 (51%), Gaps = 56/675 (8%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M E +V+ + + + +L A +F +MP R +V W+ ++ GY + +F E L L
Sbjct: 167 MGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKL 226
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M + + ++++T++++ CA L++ G Q+H LKS + +G+ L YA
Sbjct: 227 FKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYA- 285
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+C+ MSDA+ VF +P + +I GY
Sbjct: 286 ------------------------------KCDRMSDAWKVFNTLPNPPRQSYNAIIVGY 315
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
A+ G KAL++F+ ++ + + +E + + AC+ + EG +HGL +KCG F
Sbjct: 316 ARQDQGL-KALEIFQSLQRTYLSF-DEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGF 373
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL- 310
+ + +++ Y C A A ++D +E + N++I I +F +
Sbjct: 374 NICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSML 433
Query: 311 ---TEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
E + +Y S++K G ++G++ S + +++ + ++
Sbjct: 434 RSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLM 493
Query: 358 EMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
E E+ V+WNS+ISG+ E A + + M ++ + T++ + C+
Sbjct: 494 EAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCA 553
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+ +++ G+ +HA ++K S+VY+ ++LVDMYS+CG++ D++ F + W+A
Sbjct: 554 NMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSA 613
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-Y 528
++ Y++HG G +A+ LFE M ++ PN F+ VL AC G V++G+ F+ M+S Y
Sbjct: 614 MICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHY 673
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P +EHY+C+VDLLGRS ++EA + I+ M E D V+W LLS C N+EV E+A
Sbjct: 674 GLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKA 733
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
+ LD + SAYV+L+N+YA +G WG+ IR + + ++KK+PGCSWIE+ VH
Sbjct: 734 FNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHT 793
Query: 649 FSVEDRNNPNCNVIY 663
F V D+ +P IY
Sbjct: 794 FLVGDKAHPRSEEIY 808
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 155/616 (25%), Positives = 286/616 (46%), Gaps = 87/616 (14%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM--------------------H 76
A +FD+MP R V+SWNTM+ GY++ + SL TM +
Sbjct: 60 AFKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVN 119
Query: 77 RSNVKL-----------NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
R ++++ + TFS +L C+ + G Q+HCL ++ G+E GS L
Sbjct: 120 RKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSAL 179
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
+ Y+ C +++ A R+F E+ E N + WS ++ GYVQ D FI
Sbjct: 180 VDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQN-------DRFI----------- 221
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
+ LKLF+ M + G + ++ T+ SV R+CA L AF G +HG +
Sbjct: 222 --------------EGLKLFKDMLKVGMGV-SQSTYASVFRSCAGLSAFKLGTQLHGHAL 266
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR------ 299
K F +D IG A ++ Y C+ A +V++ L NP + N++I G +
Sbjct: 267 KSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALE 326
Query: 300 ----IEDAELIFNRLTEANSISYNSMIKGY----AVYGQVDDSKRLFEKMPHRSII---- 347
++ L F+ ++ + +++ S+IKG+ ++G F +I+
Sbjct: 327 IFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYG 386
Query: 348 ---SLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
+L ++ +ME R+ V+WN++I+ + QN K L L+++M + ++ T+
Sbjct: 387 KCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGS 446
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ AC+ +L G +H +VK+ + +VG++LVDMY +CG + +A+ +
Sbjct: 447 VVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKT 506
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+W ++++G+S A F MLE ++P+ T+ VL C + G +I
Sbjct: 507 TVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHA 566
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
+ + + + +VD+ + G++ ++ + P + D V W A++ A + + E
Sbjct: 567 QILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP-KRDYVTWSAMICAYAYHGHGE 625
Query: 584 VGERAAQKMFGLDKKP 599
+ ++M L+ KP
Sbjct: 626 QAIKLFEEMQLLNVKP 641
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 144/539 (26%), Positives = 253/539 (46%), Gaps = 31/539 (5%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TFS IL C+ L +L GKQ H ++ + + +V + L+ FY + A +VFD +
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ + W+ M+ GY + M A +F MP++DVV W L+S Y + K++++F
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVN-RKSIEIF 126
Query: 206 RWMRESGENMPNEY-TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
MR +P++Y TF V++AC+ + + G VH L I+ GFE D G AL++ Y
Sbjct: 127 VRMRSL--KIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR-IEDAELIFNRLTEANSIS---YNS 320
C+ DGA R++ + L +++I G + R IE +L + L +S Y S
Sbjct: 185 KCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244
Query: 321 MIK---GYAVY--GQVDDSKRLFEKMPHRSIISLNTM---------------ISVIPEME 360
+ + G + + G L + SII T+ + +P
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPP 304
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
R ++N++I GY + + KAL+++ ++++ + + S ACS + +G L
Sbjct: 305 RQ--SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQL 362
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H VK N+ V +++DMY +CG++ +A F + + +W A++ + +
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEI 422
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
+ + LF ML + P+ T+ V+ AC +N GM+I + G+ + +
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSAL 482
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
VD+ G+ G L EAE+ I D E V W +++S E +R +M + P
Sbjct: 483 VDMYGKCGMLMEAEK-IHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIP 540
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 198/415 (47%), Gaps = 54/415 (13%)
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
N ++TF +++ C+ L A GK H +I F + L++FYC + A
Sbjct: 2 NPTKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAF 61
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
+V+DR+ + + + N++I G +G + A+ +F+ + E + +S+NS++ Y G
Sbjct: 62 KVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRK 121
Query: 334 SKRLFEKM-----PHR----SII------------------------------------- 347
S +F +M PH S++
Sbjct: 122 SIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVD 181
Query: 348 ------SLNTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
L+ + EM ERN V W+++I+GYVQN+ + L+L+ M K+ + ++ST
Sbjct: 182 MYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQST 241
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
++ +F +C+ L + + G LH H +K+ F + +GT+ +DMY++C ++DA F+++
Sbjct: 242 YASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLP 301
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+P ++ A++ GY+ G +A+ +F+ + + + + G L+AC EG++
Sbjct: 302 NPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQ 361
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G+ + ++D+ G+ G L EA DM DAV W A+++A
Sbjct: 362 LHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDME-RRDAVSWNAIIAA 415
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 214/704 (30%), Positives = 345/704 (49%), Gaps = 93/704 (13%)
Query: 17 LIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
L+V N A + + A +FD+MP R V SW M+ G ++ F + M
Sbjct: 100 LMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEML 159
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
S + ++ +S I+ C L+SL GK +H ++ G+ FV + LL YA IE
Sbjct: 160 NSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIE 219
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
++ VF+ + E N++ W+ M+ G L +AFD+F++M
Sbjct: 220 DSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRM-------------------- 259
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
++G PN YT SV +A +L GK V + G E + +G
Sbjct: 260 -------------KNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVG 306
Query: 257 GALIEFYCGCEAFDGAMRVYD-RLENPCLNAS-NSLINGLISMGRIEDA-EL-------- 305
ALI+ Y C + A V+D N +N N++I+G G ++A EL
Sbjct: 307 TALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNG 366
Query: 306 ----------IFNRLTEANSISYNSMIKG---------------------YAVYGQVDDS 334
+FN + + S+ + ++ G Y+ G ++D
Sbjct: 367 ITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDV 426
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+++F++M R I+S W ++++ Y Q++L E+AL + MR+
Sbjct: 427 RKVFDRMEERDIVS-----------------WTTLVTAYSQSSLGEEALATFCLMREEGF 469
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ TFS + +C+ L L+ G+ +H L K ++ + ++L+DMY++CGSI +A
Sbjct: 470 APNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGK 529
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F IS+P++ +WTA+++GY+ HGL +A+ LF M I NA T + VL AC G+
Sbjct: 530 VFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGM 589
Query: 515 VNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V EG+ F+ M+ YGVVP +EHY C++DLLGR G L +A EFI+ MP+E + +VW LL
Sbjct: 590 VEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLL 649
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
C N+E+GE AA+K+ + + + YV+LSN Y G + + +R + VKK
Sbjct: 650 GGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKK 709
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSVV 677
+PG SWI + RVH F D+ +P IY LE L + ++V
Sbjct: 710 EPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAMV 753
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 204/664 (30%), Positives = 335/664 (50%), Gaps = 51/664 (7%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
K ++ N A + D +P V S++T++ +SK+ +F +LS S M +
Sbjct: 51 ATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGL 110
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ + + CA L++L +Q+H + SG++ FV S L+ Y C +I +A R
Sbjct: 111 MPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHR 170
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVD 196
VFD + E + + WS ++ Y + + +A +F +M + +++ W +I+G+ S
Sbjct: 171 VFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGL 230
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E L +F M G P+ T SV+ A L G ++HG +IK G D+ +
Sbjct: 231 YSEAVL-MFLDMHLRGFE-PDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVS 288
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
ALI+ Y C +V+D++++ + + N+ I GL
Sbjct: 289 SALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGL---------------------- 326
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S N GQV+ S RLF ++ + ME N V+W SMI+ QN
Sbjct: 327 SRN---------GQVESSLRLFRQLKDQG-------------MELNVVSWTSMIACCSQN 364
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
+AL+L+ M+ + T L AC + +L G+ H ++ ++VYVG
Sbjct: 365 GRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVG 424
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
++L+DMY++CG I ++ F I + N+ W A++ GY+ HG EA+ +F++M
Sbjct: 425 SALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQK 484
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P+ +F VLSAC ++GL EG F SM S YG+ +EHY C+V LL R+G L +A
Sbjct: 485 PDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYA 544
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
I+ MP+ DA VWGALLS+C N+ +GE AA+K+F L+ Y++LSNIYA G
Sbjct: 545 MIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGM 604
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
W + +R + + ++K+PGCSWIE+ ++VH D+++P I L+ L+ +
Sbjct: 605 WNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKK 664
Query: 676 VVLF 679
+ F
Sbjct: 665 LGYF 668
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/529 (22%), Positives = 217/529 (41%), Gaps = 87/529 (16%)
Query: 99 SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLV 158
SL +Q H +LK+G + + LL YAN +A V D + E N +S ++
Sbjct: 28 SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIY 87
Query: 159 GYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
+ + + A F +M + + MP+
Sbjct: 88 AFSKFHQFHHALSTFSQMLTRGL---------------------------------MPDN 114
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
S ++ACA L A + VHG+ GF+ D + +L+ Y C A RV+DR
Sbjct: 115 RVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDR 174
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLF 338
+ P + +S+++++ YA G VD++KRLF
Sbjct: 175 MFEP-------------------------------DVVSWSALVAAYARQGCVDEAKRLF 203
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
+M + + N ++WN MI+G+ + L+ +A+ +++ M +
Sbjct: 204 SEMGDSGV-------------QPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDG 250
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
+T S + A L L G L+H +++K S+ V ++L+DMY +C ++ F
Sbjct: 251 TTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQ 310
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ +V + A + G S +G ++ LF + +Q + N ++ +++ C + G E
Sbjct: 311 MDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEA 370
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSG---HLHEAEEFIKDMPIELDAVVWGALLSA 575
+++FR M+ GV P C++ G H A F I D V AL+
Sbjct: 371 LELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALID- 429
Query: 576 CWFWMNMEVGERAAQKMF--GLDKKPISAYVILSNIYAVLGKWGKKMDI 622
M + G A ++ G+ K + + + YA+ GK + M+I
Sbjct: 430 ----MYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEI 474
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 8/183 (4%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIR----TVVSWNTMLCGYSKWAKFDESLSLVSTM 75
S N I RNGQ+ ++ LF Q+ + VVSW +M+ S+ + E+L L M
Sbjct: 318 SCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREM 377
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ VK N T +L C + +L+ GK HC L+ G +VGS L+ YA C I
Sbjct: 378 QIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRI 437
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGY 191
+ ++ FD + N + W+ ++ GY +A ++F M K D++ +T ++S
Sbjct: 438 QASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSAC 497
Query: 192 AKS 194
++S
Sbjct: 498 SQS 500
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 9/171 (5%)
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
S SL Q + HAH++KT ++ ++ T L+ Y+ DA + PNV +++
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
L+ +S A+ F ML + ++P+ + AC AGL +K R +
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKAC--AGL--SALKPARQVHGI 139
Query: 529 GVVPTLEH----YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
V + + +V + + + +A M E D V W AL++A
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAA 189
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 209/677 (30%), Positives = 345/677 (50%), Gaps = 105/677 (15%)
Query: 20 STNKAITEC-----GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
S++ AIT+C R GQ+ ARN+FD + +TV SWN ++ GY + E+ L
Sbjct: 13 SSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDK 72
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M N N L+ G +V +G+
Sbjct: 73 MPERNT--------------ISWNGLVSG----------------YVKNGM--------- 93
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I EA++VFD++ E N + W+ M+ GYVQ L+ +A +F +MP+K+VV WT ++ G +
Sbjct: 94 ISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIE- 152
Query: 195 VDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFC-EGKVVHGLLIKCGFEFD 252
DG ++A +LF + +P V+ + +G C EG++
Sbjct: 153 -DGRVDEARRLF-------DMIP----VKDVVASTNMIGGLCSEGRLSE----------- 189
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
A ++D + + A S+I+G +++ A +F + +
Sbjct: 190 -------------------AREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPD 230
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEM 359
N +++ +M+KGY G+++++ LF+ MP + + + N MI V +M
Sbjct: 231 KNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQM 290
Query: 360 -ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
E++ TW+++I Y + +AL L+ M++ + + + C L SL G+
Sbjct: 291 KEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGR 350
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H+ LV++ F+ ++YV + L+ MY +CG + + F SS ++ W +++ GY+ HG
Sbjct: 351 QVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHG 410
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHY 537
G +A+ +F M P+ TF+GVLSAC G V EG++IF SMKS Y V EHY
Sbjct: 411 FGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHY 470
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
C+VDLLGR+G L+EA I++MP+E DA+VWGALLSAC N+++ E AA+K+ L+
Sbjct: 471 ACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEP 530
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS-VEDRNN 656
Y++LSN+YA +W ++RK + V K PGCSWIE++++VH F+ ++
Sbjct: 531 SSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASH 590
Query: 657 PNCNVIYATLEHLTANL 673
P +I LE L A+L
Sbjct: 591 PEHEMIMKKLEKLGASL 607
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 159/325 (48%), Gaps = 34/325 (10%)
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
F +I I ++ D A ++D L++ + + N+++ G R +A+ +F+
Sbjct: 12 FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71
Query: 309 RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
++ E N+IS+N ++ GY G + +++++F+KMP R+++S W S
Sbjct: 72 KMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVS-----------------WTS 114
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
M+ GYVQ L ++A L+ M ++ +++V+ G + + + L + P
Sbjct: 115 MVRGYVQEGLIDEAELLFWRMP----EKNVVSWTVMLGGLIEDGRVDEARRLFDMI---P 167
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
+ +V T+++ G +++A+ F + NV AWT++++GY+ + A LFE
Sbjct: 168 VK-DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFE 226
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548
+M ++ N T+ +L R+G +NE ++F++M V + ++ G +G
Sbjct: 227 VMPDK----NEVTWTAMLKGYTRSGRINEAAELFKAMP----VKPVAACNGMIMGFGLNG 278
Query: 549 HLHEAEEFIKDMPIELDAVVWGALL 573
+ +A ++ D E D W AL+
Sbjct: 279 EVGKA-RWVFDQMKEKDDGTWSALI 302
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 212/494 (42%), Gaps = 67/494 (13%)
Query: 6 TQSQTLMTQ--ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
++Q L + E +S N ++ +NG + AR +FD+MP R VVSW +M+ GY +
Sbjct: 64 AEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEG 123
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLV-LKSGYECFEFVG 122
DE+ L M NV +++ +L + + + +++ ++ +K +G
Sbjct: 124 LIDEAELLFWRMPEKNV----VSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIG 179
Query: 123 SGLLFFYANCFE--IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
GL C E + EA+ +FDE+ + N + W+ M+ GY N + A +F MP K+
Sbjct: 180 -GL------CSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKN 232
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
V WT ++ GY +S +A +LF+ MP ++ A G +
Sbjct: 233 EVTWTAMLKGYTRS-GRINEAAELFK-------AMP--------VKPVAACNGMIMGFGL 276
Query: 241 HGLLIKCGFEFDE------SIGGALIEFY--CGCE-----AFDGAMRVYDRLENPCLNAS 287
+G + K + FD+ ALI+ Y G E F R R P + +
Sbjct: 277 NGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISI 336
Query: 288 NSLINGLISM--GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
S+ L S+ GR ++L+ + +S + +I Y G + KR+F++ +
Sbjct: 337 LSVCGSLASLDHGRQVHSQLVRSHFDLDIYVS-SVLITMYIKCGDLVTGKRVFDRFSSKD 395
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
I+ N+ +I+GY Q+ EKAL+++ M TF +
Sbjct: 396 IVMWNS-----------------IIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVL 438
Query: 406 HACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPN 463
AC G +++G ++ + K + +VD+ R G +N+A ++ +
Sbjct: 439 SACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEAD 498
Query: 464 VAAWTALMNGYSHH 477
W AL++ H
Sbjct: 499 AIVWGALLSACRTH 512
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 205/675 (30%), Positives = 347/675 (51%), Gaps = 65/675 (9%)
Query: 25 ITECGR------NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
+ EC R +G+L A +LFD+MP + VV+W +++ GY++ + + +L++ + M S
Sbjct: 49 VLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVES 108
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
V N+ + L CA L +L G+Q+H L +++G+ ++GS L+ Y+ C + A
Sbjct: 109 GVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAA 168
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
K VFD +M DVV +T LIS + ++ +
Sbjct: 169 KEVFD-------------------------------RMDSPDVVGYTSLISAFCRNGEFE 197
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI--G 256
A L + +++ + PNE+T +++ AC R+ G+ +HG LIK +S+
Sbjct: 198 LAAEALIQMLKQGLK--PNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSS 251
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TE 312
ALI+FY F A V+D L + + S++ I GR+E+A +F + +
Sbjct: 252 TALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVD 311
Query: 313 ANSISYN-------SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME----- 360
N + + S+ G ++ + + +++S+ ++ E+E
Sbjct: 312 PNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNK 371
Query: 361 -RNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
NP V+W + IS QN EKA+ L M FS + +C+ + SL QG
Sbjct: 372 IENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG 431
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
H +K +S + G +L++MYS+CG + A+ +F + + +V +W +L++G++ H
Sbjct: 432 MQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQH 491
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEH 536
G ++A+ +F M I P+ +TF+GVL C +G+V EG FR M Y P H
Sbjct: 492 GDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSH 551
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
Y C++D+LGR+G EA I DMP E DA++W LL++C N+++G+ AA ++ L
Sbjct: 552 YACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELS 611
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
+ ++YV++SNIYA+ G+W +R+R+ VKKD GCSWIE+N+ VH F+ D ++
Sbjct: 612 DRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSH 671
Query: 657 PNCNVIYATLEHLTA 671
PN + IY L L A
Sbjct: 672 PNSDSIYQMLGELVA 686
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 181/441 (41%), Gaps = 58/441 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S+ I RNG+ A+ +FD + + VVSW +M+ Y + + +E+L + M
Sbjct: 248 VYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMIS 307
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V NE S +L C + G+Q+HC +K V + LL Y +EE
Sbjct: 308 EGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEE 364
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+ + + K+ D+V WT IS ++ G
Sbjct: 365 LEAMLN-------------------------------KIENPDLVSWTTAISANFQNGFG 393
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
EKA+ L M G PN Y F SV+ +CA + + +G H L +K G + + G
Sbjct: 394 -EKAIALLCQMHSEGFT-PNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGN 451
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEA 313
ALI Y C A +D + + + NSLI+G G A +F+++ +
Sbjct: 452 ALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKP 511
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
+ ++ ++ G G V++ + F M + S P P + MI
Sbjct: 512 DDSTFLGVLMGCNHSGMVEEGELFFRLMIDQ--------YSFTPA----PSHYACMIDML 559
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESN 432
+N ++AL++ + + + + L +C +L G+L L++ + +S
Sbjct: 560 GRNGRFDEALRM---INDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSA 616
Query: 433 VYVGTSLVDMYSRCGSINDAQ 453
YV S ++Y+ G DA+
Sbjct: 617 SYVLMS--NIYAMHGEWEDAR 635
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 149/334 (44%), Gaps = 44/334 (13%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
T I +N ++ GR G + + +++ +VSW T + + +++++L+ M
Sbjct: 344 TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQM 403
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
H N FS++LS CA + SL G Q HCL LK G + G+ L+ Y+ C ++
Sbjct: 404 HSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 463
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A+ FD +H + W+ ++ G+ Q DA
Sbjct: 464 GSARLAFDVMHTHDVTSWNSLIHGHAQ---HGDA-------------------------- 494
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI-KCGFEFDES 254
KAL++F MR +G P++ TF V+ C G EG++ L+I + F S
Sbjct: 495 ---NKALEVFSKMRSNGIK-PDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPS 550
Query: 255 IGGALIEFYCGCEAFDGAMRVY-------DRLENPCLNASNSLINGLISMGRIEDAELIF 307
+I+ FD A+R+ D L L AS L L +G++ L+
Sbjct: 551 HYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNL-DIGKLAADRLM- 608
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
L++ +S SY M YA++G+ +D++++ +M
Sbjct: 609 -ELSDRDSASYVLMSNIYAMHGEWEDARKVRRRM 641
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
++ I + N I + GQ+ +AR FD M V SWN+++ G+++ +++L + S
Sbjct: 444 DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSK 503
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL--------KSGYEC-FEFVGSGL 125
M + +K +++TF +L C + +G+ L++ S Y C + +G
Sbjct: 504 MRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNG 563
Query: 126 LFFYANCFEIEEAKRVFDELH-EDNELLWSLMLVGYVQCNLMSD------AFDVFIKMPK 178
F +EA R+ +++ E + L+W +L C L + A D +++
Sbjct: 564 RF--------DEALRMINDMPFEPDALIWKTLL---ASCKLHRNLDIGKLAADRLMELSD 612
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
+D + + + YA + E A K+ R M E+G
Sbjct: 613 RDSASYVLMSNIYAMHGEW-EDARKVRRRMDETG 645
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 208/669 (31%), Positives = 351/669 (52%), Gaps = 55/669 (8%)
Query: 23 KAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL 82
K I+ + G A +F+ + ++ V ++ ML GY+K + ++L M V+L
Sbjct: 84 KVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRL 143
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
++ +L +C + L G++IH L++ +G+E FV + ++ YA C +I+
Sbjct: 144 VVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQID------ 197
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
+A+ +F +M KD+V WT L++GYA++ ++AL
Sbjct: 198 -------------------------NAYKMFERMQHKDLVSWTTLVAGYAQN-GHAKRAL 231
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
+L M+E+G+ P+ T S++ A A + A G+ +HG + GFE ++ AL++
Sbjct: 232 QLVLQMQEAGQK-PDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDM 290
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI 322
Y C + A V+ + + + + N++I+G G E+A F ++ + + +
Sbjct: 291 YFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTM 350
Query: 323 KGY----AVYGQVDDS---KRLFEKMPHRSIIS-LNTMIS-------------VIPEMER 361
G A G ++ +L +K+ S +S +N++IS + +E+
Sbjct: 351 MGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEK 410
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
VTWN+MI GY QN ++AL L+ M+ I T + A + +Q + +H
Sbjct: 411 TNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIH 470
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
V+ ++NV+V T+LVDMY++CG+I A+ F + +V W A+++GY HG+G
Sbjct: 471 GLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGK 530
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCV 540
E + LF M + + PN TF+ V+SAC +G V EG+ +F+SM+ Y + PT++HY+ +
Sbjct: 531 ETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAM 590
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
VDLLGR+G L +A FI++MPI+ V GA+L AC N+E+GE+AAQK+F LD
Sbjct: 591 VDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEG 650
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
+V+L+NIYA W K +R + + K PGCSW+EL + +H F N+P
Sbjct: 651 GYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESK 710
Query: 661 VIYATLEHL 669
IYA LE L
Sbjct: 711 KIYAFLETL 719
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 148/332 (44%), Gaps = 40/332 (12%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+L+ TN + + G AR +F M +TVVSWNTM+ G ++ + +E+ +
Sbjct: 278 ESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLK 337
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M T +L CA L L G +H L+ K + V + L+ Y+ C
Sbjct: 338 MLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKR 397
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
++ A +F+ L + N + W+ M++GY Q
Sbjct: 398 VDIAASIFNNLEKTN-VTWNAMILGYAQ-------------------------------- 424
Query: 195 VDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+GC K AL LF M+ G + + +T VI A A + K +HGL ++ + +
Sbjct: 425 -NGCVKEALNLFCMMQSQGIKL-DCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNV 482
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
+ AL++ Y C A A +++D ++ + N++I+G + G ++ +FN + +
Sbjct: 483 FVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKG 542
Query: 314 ----NSISYNSMIKGYAVYGQVDDSKRLFEKM 341
N I++ S+I + G V++ LF+ M
Sbjct: 543 AVKPNDITFLSVISACSHSGFVEEGLLLFKSM 574
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 141/322 (43%), Gaps = 19/322 (5%)
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
V ++ M+ GY +N+ AL ++ M + ++ L C L++G+ +H
Sbjct: 111 VLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGL 170
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
++ FESN++V T+++ +Y++C I++A F + ++ +WT L+ GY+ +G A
Sbjct: 171 IITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRA 230
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV--- 540
+ L M E P++ T V +L A + ++I RS+ Y E V
Sbjct: 231 LQLVLQMQEAGQKPDSVTLVSILPAVADM----KALRIGRSIHGYAFRSGFESLVNVTNA 286
Query: 541 -VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
+D+ + G A K M + V W ++ C N E E A + LD+
Sbjct: 287 LLDMYFKCGSARIARLVFKGMRSK-TVVSWNTMIDGC--AQNGESEEAFATFLKMLDEGE 343
Query: 600 ISAYVILSNIY---AVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
+ V + + A LG + + K L L++ + +NS + +S R +
Sbjct: 344 VPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSV----MNSLISMYSKCKRVD 399
Query: 657 PNCNVIYATLEHLTANLNSVVL 678
+ I+ LE N+++L
Sbjct: 400 IAAS-IFNNLEKTNVTWNAMIL 420
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 213/664 (32%), Positives = 358/664 (53%), Gaps = 61/664 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
++ LFD+ P + + N +L +S+ + E+L+L + RS + ++ S +L VC
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L I GKQ+HC +K G+ VG+ L+ Y +E+ +RVFDE
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDE------------ 152
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENM 215
M K+VV WT L++GY + +G E+ALKLF M+ G
Sbjct: 153 -------------------MRVKNVVSWTSLLAGYRQ--NGLNEQALKLFSQMQLEGIK- 190
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN +TF +V+ A GA +G VH ++IK G + +G +++ Y A V
Sbjct: 191 PNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAV 250
Query: 276 YDRLENPCLNASNSLINGLISMG-RIEDAELIFNRLTEANSIS---YNSMIKGYAVYGQV 331
+D +EN + NS+I G ++ G +E EL + E ++ + ++IK A ++
Sbjct: 251 FDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEM 310
Query: 332 DDSKRLF-EKMPHRSIISLNTMISVI------PEME------------RNPVTWNSMISG 372
+K+L + + + S LN +++ E++ +N V+W ++ISG
Sbjct: 311 SFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISG 370
Query: 373 YVQNNLHEKALQLYMTMRKL-AIDRTRSTFSVLFHACSC-LGSLQQGQLLHAHLVKTPFE 430
YVQN ++A+ L+ MR+ ++ TFS + +AC+ S++QG+ H+ +K+ F
Sbjct: 371 YVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFS 430
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+ + V ++LV MY++ G+I A F ++ +W ++++GY+ HG G +++ +FE M
Sbjct: 431 NALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEM 490
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGH 549
+++ + TF+GV+SAC AGLVNEG + F M K Y +VPT+EHY+C+VDL R+G
Sbjct: 491 RSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGM 550
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
L +A + I MP A +W LL+AC +N+++GE AA+K+ L + +AYV+LSNI
Sbjct: 551 LEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNI 610
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
YA G W ++ +RK + +VKK+ G SWIE+ ++ +F D ++P + IY LE L
Sbjct: 611 YATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEEL 670
Query: 670 TANL 673
+ L
Sbjct: 671 SIRL 674
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 221/682 (32%), Positives = 341/682 (50%), Gaps = 91/682 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFD---QMPIRTVVSWNTMLCGYSK----WAKFD- 66
E+ + N + R G L A +FD Q I V+SWN+++ + K W D
Sbjct: 187 ESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDL 246
Query: 67 -ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
++L+ +N + + + IL C L ++ K++H +++G FVG+ L
Sbjct: 247 FSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNAL 306
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DV 181
+ YA C +E A +VF+ + + + W+ M+ GY Q AF++F M K+ DV
Sbjct: 307 IDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDV 366
Query: 182 VVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
V WT +I+GY++ GC +AL LFR M SG ++PN T SV+ ACA LGAF +G +
Sbjct: 367 VTWTAVIAGYSQR--GCSHEALNLFRQMIFSG-SLPNCVTIISVLSACASLGAFSQGTEI 423
Query: 241 HGLLIK-CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
H +K C D GG
Sbjct: 424 HAYSLKNCLLTLDNDFGG------------------------------------------ 441
Query: 300 IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
ED +L+ YN++I Y+ ++ +F+ IP
Sbjct: 442 -EDEDLMV----------YNALIDMYSKCRSFKAARSIFDD---------------IPLE 475
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTM--RKLAIDRTRSTFSVLFHACSCLGSLQQG 417
ERN VTW MI G+ Q AL+L++ M + T S + AC+ L +++ G
Sbjct: 476 ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIG 535
Query: 418 QLLHAHLVKT-PFESNVY-VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+ +HA++++ +ES+ Y V L+DMYS+CG ++ A+ F S+S + +WT++M GY
Sbjct: 536 KQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYG 595
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTL 534
HG GSEA+ +F+ M + VP+ TF+ VL AC G+V++G+ F SM + YG+ P
Sbjct: 596 MHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRA 655
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY C +DLL RSG L +A +KDMP+E AVVW ALLSAC N+E+ E A K+
Sbjct: 656 EHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVE 715
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
++ + +Y ++SNIYA G+W IR + +KK PGCSW++ +F V DR
Sbjct: 716 MNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDR 775
Query: 655 NNPNCNVIYATLEHLTANLNSV 676
++P IYA LE L + ++
Sbjct: 776 SHPLSPQIYALLESLIDRIKAM 797
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 213/669 (31%), Positives = 341/669 (50%), Gaps = 101/669 (15%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
+ N IT R G++ AR LFD +++ SWN+M+ GY + M R
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGY-----------FANLMPRDA 67
Query: 80 VKL-NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
KL +E I+S N L+ G +K+G EI+EA
Sbjct: 68 RKLFDEMPDRNIIS----WNGLVSG------YMKNG-------------------EIDEA 98
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG- 197
++VFD + E N + W+ ++ GYV + A +F KMP+K+ V WT ++ G+ + DG
Sbjct: 99 RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQ--DGR 156
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+ A KL+ E +P++ D++ R ++HGL
Sbjct: 157 IDDACKLY-------EMIPDK---DNIART----------SMIHGL-------------- 182
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
C D A ++D + + +++ G R++DA IF+ + E +S
Sbjct: 183 ------CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS 236
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNP 363
+ SM+ GY G+++D++ LFE MP + +I+ N MIS + + ERN
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
+W ++I + +N +AL L++ M+K + T T + C+ L SL G+ +HA
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
LV+ F+ +VYV + L+ MY +CG + ++ F S ++ W ++++GY+ HGLG EA
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEA 416
Query: 484 VLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVV 541
+ +F E+ L PN TFV LSAC AG+V EG+KI+ SM+S +GV P HY C+V
Sbjct: 417 LKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMV 476
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
D+LGR+G +EA E I M +E DA VWG+LL AC ++V E A+K+ ++ +
Sbjct: 477 DMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSG 536
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN-NPNCN 660
Y++LSN+YA G+W ++RK + V+K PGCSW E+ ++VHAF+ N +P
Sbjct: 537 TYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQE 596
Query: 661 VIYATLEHL 669
I L+ L
Sbjct: 597 SILKILDEL 605
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 168/384 (43%), Gaps = 63/384 (16%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I+S N ++ +NG++ AR +FD MP R VVSW ++ GY K D + SL M
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 138
Query: 78 SNVKLNETTF-------STILSVCAQLNSLIDGKQ-------IHCLV----LKSGYECFE 119
N K++ T I C +L +I K IH L + E F+
Sbjct: 139 KN-KVSWTVMLIGFLQDGRIDDAC-KLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFD 196
Query: 120 -------FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
+ ++ Y +++A+++FD + E E+ W+ ML+GYVQ + DA ++
Sbjct: 197 EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL 256
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN------------------ 214
F MP K V+ +ISG + + KA ++F M+E +
Sbjct: 257 FEVMPVKPVIACNAMISGLGQKGE-IAKARRVFDSMKERNDASWQTVIKIHERNGFELEA 315
Query: 215 ------------MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
P T S++ CA L + GK VH L++C F+ D + L+
Sbjct: 316 LDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTM 375
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-----TEANSIS 317
Y C + ++DR + + NS+I+G S G E+A +F + T+ N ++
Sbjct: 376 YIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVT 435
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKM 341
+ + + + G V++ +++E M
Sbjct: 436 FVATLSACSYAGMVEEGLKIYESM 459
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 144/332 (43%), Gaps = 37/332 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+++ N I+ G+ G++ AR +FD M R SW T++ + + E+L L M +
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V+ T +ILSVCA L SL GKQ+H +++ ++ +V S L+ Y C E+ +
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+K +FD + ++W+ ++ GY L +A VF +MP
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPL------------------- 425
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIG 256
SG PNE TF + + AC+ G EG K+ + G + +
Sbjct: 426 -------------SGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHY 472
Query: 257 GALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRLTE--- 312
+++ F+ AM + D + P SL+ + +++ AE +L E
Sbjct: 473 ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEP 532
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
NS +Y + YA G+ D L + M R
Sbjct: 533 ENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 202/644 (31%), Positives = 329/644 (51%), Gaps = 91/644 (14%)
Query: 39 NLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-------SNVKLNETTFSTIL 91
LF MP R VS+N ++ G+S + + R + V+ + T S ++
Sbjct: 97 RLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMV 156
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ L G+Q+HC +++ G+ + F S L+ YA I +AKRVFDE+ N +
Sbjct: 157 MAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVV 216
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRE 210
+++ M+ G ++C ++ +A VF M +D + WT +++G + +G + +AL +FR MR
Sbjct: 217 MYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQ--NGLQSEALDVFRRMRA 274
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G + ++YTF S++ AC L A EGK +H I+ ++ + +G AL++ Y C +
Sbjct: 275 EGVGI-DQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRS-- 331
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
I AE +F R+T N IS+ +MI GY G
Sbjct: 332 -----------------------------IRLAEAVFRRMTCKNIISWTAMIVGYGQNGC 362
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+++ R+F +M I + N T S+IS
Sbjct: 363 GEEAVRVFSEMQTDGI-------------KPNDFTLGSVIS------------------- 390
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+C+ L SL++G H + + + V ++LV +Y +CGSI
Sbjct: 391 ----------------SCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIE 434
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
DA F + + ++TAL++GY+ G E + LFE ML + + PN TF+GVLSAC
Sbjct: 435 DAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACS 494
Query: 511 RAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
R+GLV +G F SM+ +G+V +HYTC++DL RSG L EAEEFI+ MP DA+ W
Sbjct: 495 RSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGW 554
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
LLSAC +ME+G+ AA+ + D + ++YV+L +++A G+W + +R+ +
Sbjct: 555 ATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDR 614
Query: 630 EVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+VKK+PGCSWI+ +RVH FS +D+++P IY L+ L + +
Sbjct: 615 QVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKM 658
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 227/476 (47%), Gaps = 55/476 (11%)
Query: 106 IHCLVLKS-GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
+HCLVL++ + +V + LL YA + A+R+FD + + N + +L
Sbjct: 31 VHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHAR 90
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE-----SGENMPNEY 219
L+ D +F MP++D V + LI+G++ + A +RE P+
Sbjct: 91 LLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRI 150
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T ++ A + LG G+ VH +++ GF G AF
Sbjct: 151 TMSGMVMAASALGDRALGRQVHCQIMRLGF---------------GAYAF---------- 185
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFE 339
+ L++ MG I DA+ +F+ + N + YN+MI G V++++ +FE
Sbjct: 186 ------TWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFE 239
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
M ++R+ +TW +M++G QN L +AL ++ MR + +
Sbjct: 240 AM-----------------VDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQY 282
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
TF + AC L + ++G+ +HA+ ++T ++ N++VG++LVDMYS+C SI A+A F +
Sbjct: 283 TFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRM 342
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+ N+ +WTA++ GY +G G EAV +F M I PN T V+S+C + EG
Sbjct: 343 TCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGA 402
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G+ P + + +V L G+ G + +A +MP D V + AL+S
Sbjct: 403 QFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFH-DQVSYTALVSG 457
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 211/518 (40%), Gaps = 121/518 (23%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N IT R + AR +F+ M R ++W TM+ G ++ E+L + M
Sbjct: 215 VVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRA 274
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V +++ TF +IL+ C L + +GKQIH +++ Y+ FVGS L+ Y+ C I
Sbjct: 275 EGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRL 334
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VF + N + W+ M+VGY Q +G
Sbjct: 335 AEAVFRRMTCKNIISWTAMIVGYGQ---------------------------------NG 361
Query: 198 C-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
C E+A+++F M+ G PN++T SVI +CA L + EG H + + G ++
Sbjct: 362 CGEEAVRVFSEMQTDGIK-PNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVS 420
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
AL+ Y C G IEDA +F+ + + +
Sbjct: 421 SALVTLYGKC-------------------------------GSIEDAHRLFDEMPFHDQV 449
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
SY +++ GYA +G+ ++ LFEKM ++ ++ N VT+ ++S ++
Sbjct: 450 SYTALVSGYAQFGKAKETIDLFEKM-------------LLKGVKPNGVTFIGVLSACSRS 496
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ---LLHAHLVKTPFESNV 433
L EK CS S+QQ LL H
Sbjct: 497 GLVEK-------------------------GCSYFHSMQQDHGIVLLDDHY--------- 522
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISS-PNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
T ++D+YSR G + +A+ + P+ W L++ G E +L+
Sbjct: 523 ---TCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLK 579
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
D N A++V + S G +E + R M+ V
Sbjct: 580 TD-PQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQV 616
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 204/679 (30%), Positives = 346/679 (50%), Gaps = 63/679 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G+ A+ LFD+MP R VVSWN+++ GY++ + E ++L S+++L++ TFS L
Sbjct: 68 GETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNAL 127
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
SVC + L G+ IH L+ SG + + L+ Y C I+ A+ VF+ E + +
Sbjct: 128 SVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSV 187
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ++ GYV+ + ++ L+L M
Sbjct: 188 SWNSLIAGYVR--------------------------------IGSNDEMLRLLVKMLRH 215
Query: 212 GENMPNEYTFDSVIRAC-ARLGAFCE-GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G N+ N Y S ++AC + + E GK++HG +K G + D +G AL++ Y
Sbjct: 216 GLNL-NSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDL 274
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIED-----AELIF----NRLTEANSISYNS 320
+ A +++ + +P + N++I G + M + D A +F +R + + +++S
Sbjct: 275 EDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSS 334
Query: 321 MIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE----MERNP--- 363
++K G ++ Q+ ++ +++ L ++ I + P
Sbjct: 335 ILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLD 394
Query: 364 -VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
V+W S+I G+VQN E L L+ + T S++ AC+ L +++ G+ +HA
Sbjct: 395 VVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHA 454
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+ +KT + + S + MY++CG I+ A +F +P++ +W+ +++ + HG E
Sbjct: 455 YAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKE 514
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVV 541
AV LFE+M I PN TF+GVL AC GLV EG++ F M K +G+ P ++H C+V
Sbjct: 515 AVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIV 574
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
DLLGR+G L EAE FI D E D V+W +LLSAC + G+R A+++ L+ + +
Sbjct: 575 DLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAA 634
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNV 661
+YV+L NIY G +IR + VKK+PG SWIE+ + VH+F DR++PN V
Sbjct: 635 SYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQV 694
Query: 662 IYATLEHLTANLNSVVLFD 680
IY LE + + + D
Sbjct: 695 IYVQLEEMLEEIKKLDYID 713
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/546 (21%), Positives = 232/546 (42%), Gaps = 105/546 (19%)
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ L+ T++ ++ + SLI GK H ++K+ ++ F+ + LL+ Y C E + AK
Sbjct: 15 LPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAK 74
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
++FD + + N + W+ ++ GY Q + ++F + D+ +
Sbjct: 75 KLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRL---------------- 118
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+++TF + + C R G+++H L+ G + +L
Sbjct: 119 -----------------DKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSL 161
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE------- 312
I+ YC C D A V++ + + NSLI G + +G ++ + ++
Sbjct: 162 IDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNS 221
Query: 313 --------------ANSISYNSMIKG--------------------YAVYGQVDDSKRLF 338
++SI M+ G YA G ++D+ ++F
Sbjct: 222 YALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIF 281
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ-----NNLHEKALQLYMTMRKLA 393
+ MP + N V +N+MI+G++Q + +A+ L+ M+
Sbjct: 282 KLMP-----------------DPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRG 324
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+ + TFS + ACS + + + G+ +HA + K +S+ ++G +LV++YS GSI D
Sbjct: 325 MKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGL 384
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F S +V +WT+L+ G+ +G + LF +L P+ T +LSAC
Sbjct: 385 KCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLA 444
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVD----LLGRSGHLHEAEEFIKDMPIELDAVVW 569
V G +I +Y + + ++T + + + + G + A K+ D V W
Sbjct: 445 AVKSGEQI----HAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETK-NPDIVSW 499
Query: 570 GALLSA 575
++S+
Sbjct: 500 SVMISS 505
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/540 (24%), Positives = 239/540 (44%), Gaps = 57/540 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++ TN I + G++ AR +F+ VSWN+++ GY + DE L L+ M R
Sbjct: 155 VLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLR 214
Query: 78 SNVKLNETTFSTILSVC-AQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ LN + L C + +S I+ GK +H +K G + VG+ LL YA ++
Sbjct: 215 HGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDL 274
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
E+A ++F + + N ++++ M+ G++Q M+D F
Sbjct: 275 EDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEF------------------------- 309
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+A+ LF M+ G P+E+TF S+++AC+ + AF GK +H + K + DE I
Sbjct: 310 --ANEAMYLFFEMQSRGMK-PSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFI 366
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----T 311
G AL+E Y + + ++ + + + SLI G + G+ E +F+ L
Sbjct: 367 GNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGR 426
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI----ISLNTMISVIPEM-------- 359
+ + + + M+ A V +++ I I N+ I + +
Sbjct: 427 KPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANM 486
Query: 360 ----ERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
+NP V+W+ MIS Q+ ++A+ L+ M+ I TF + ACS G
Sbjct: 487 TFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGL 546
Query: 414 LQQGQLLHAHLVKTP--FESNVYVGTSLVDMYSRCGSINDAQASF-SSISSPNVAAWTAL 470
+++G L + ++K NV +VD+ R G + +A++ S + W +L
Sbjct: 547 VEEG-LRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSL 605
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
++ H + E ++E + AA++V + + AG+ +I MK GV
Sbjct: 606 LSACRVHKATDTGKRVAERVIELE-PEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGV 664
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 208/671 (30%), Positives = 350/671 (52%), Gaps = 58/671 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N IT GR +AR +FD+MP R VSW +++ + + + ++L L S+M RS
Sbjct: 90 NHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTA 149
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ + + C +L + G+Q+H LKS GS L+
Sbjct: 150 ADQFALGSAVRACTELGDVGTGRQVHAHALKSER------GSDLI--------------- 188
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-K 200
+ + ++ Y + L+ D F +F ++ KD++ W +I+G+A+ G E +
Sbjct: 189 ----------VQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQ--GFEME 236
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL++FR M G + PNE+ F S RAC +G++ G+ +HGL IK + D +G +L
Sbjct: 237 ALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLS 296
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA------- 313
+ Y + D A + R+E P L + NS++N G + +A ++F+ + ++
Sbjct: 297 DMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGI 356
Query: 314 ------------NSISYNSMIKGYAVYGQVDDSKRLFEKM--PHRSIISLNTMISVIPEM 359
+++ + +I Y V +D + + + L++ + V E+
Sbjct: 357 TVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEI 416
Query: 360 -ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+++ VTWNS+++ Q+N E+ L+L+ + K R + + + A + LG + +
Sbjct: 417 KDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVK 476
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGYSHH 477
+HA+ K + + +L+D Y++CGS++DA F + ++ +V +W++L+ GY+
Sbjct: 477 QVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQF 536
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEH 536
G EA+ LF M I PN TF+GVL+AC R G VNEG + M+ YG+VPT EH
Sbjct: 537 GYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREH 596
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
+C+VDLL R+G L EA FI MP E D ++W LL+A +ME+G+RAA+ + +D
Sbjct: 597 CSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNID 656
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
+AYV+L NIYA G W + ++K + VKK PG SW++L + F VEDR++
Sbjct: 657 PSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSH 716
Query: 657 PNCNVIYATLE 667
P IYA LE
Sbjct: 717 PESEEIYAMLE 727
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 207/490 (42%), Gaps = 105/490 (21%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
++ ++S C++L SL G+++H ++ S + +G
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAG---------------------- 84
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
N +L + ++ Y +C A VF +MP ++ V W +I+ + ++ + AL LF
Sbjct: 85 --NTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGD-ALGLFS 141
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M SG +++ S +RAC LG G+ VH +K D + AL+ Y
Sbjct: 142 SMLRSG-TAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSK- 199
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
NGL ++D ++F R+ + + IS+ S+I G+A
Sbjct: 200 -------------------------NGL-----VDDGFMLFERIKDKDLISWGSIIAGFA 229
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G ++ ++F KM I E +P N H
Sbjct: 230 QQGFEMEALQVFRKM--------------IVEGSHHP------------NEFH------- 256
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
F F AC +GS + G+ +H +K + ++YVG SL DMY+R
Sbjct: 257 --------------FGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARF 302
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
+++ A+ +F I +P++ +W +++N YS GL SEA++LF M + + P+ T G+L
Sbjct: 303 KNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLL 362
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
ACV + G I + G+ + ++ + R L A + ++ + D
Sbjct: 363 CACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK-DQDV 421
Query: 567 VVWGALLSAC 576
V W ++L+AC
Sbjct: 422 VTWNSILTAC 431
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 128/562 (22%), Positives = 232/562 (41%), Gaps = 106/562 (18%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-H 76
++ N +T +NG + LF+++ + ++SW +++ G+++ E+L + M
Sbjct: 187 LIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIV 246
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ NE F + C + S G+QIH L +K + +VG L YA F+
Sbjct: 247 EGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYAR-FKNL 305
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
++ RV F ++ D+V W +++ Y SV+
Sbjct: 306 DSARV------------------------------AFYRIEAPDLVSWNSIVNAY--SVE 333
Query: 197 G-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
G +AL LF MR+SG P+ T ++ AC A G+++H L+K G + D S+
Sbjct: 334 GLLSEALVLFSEMRDSGLR-PDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSV 392
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF-------- 307
+L+ Y C AM V+ +++ + NS++ E+ +F
Sbjct: 393 CNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP 452
Query: 308 --------NRLTEANSISY-----------------------NSMIKGYAVYGQVDDSKR 336
N L+ + + Y N++I YA G +DD+ R
Sbjct: 453 SLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMR 512
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
LFE M + R+ +W+S+I GY Q ++AL L+ MR L I
Sbjct: 513 LFEIMGN----------------NRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRP 556
Query: 397 TRSTFSVLFHACSCLGSLQQG----QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
TF + ACS +G + +G ++ P + + +VD+ +R G + +A
Sbjct: 557 NHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHC---SCIVDLLARAGKLTEA 613
Query: 453 QASFSSIS-SPNVAAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+ P++ W L+ H +G A E +L D ++A +V + +
Sbjct: 614 ANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAA---EGILNID-PSHSAAYVLLCNI 669
Query: 509 CVRAGLVNEGMKIFRSMKSYGV 530
+G NE ++ ++M++ GV
Sbjct: 670 YAASGNWNEFARLKKAMRTSGV 691
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 193/640 (30%), Positives = 330/640 (51%), Gaps = 53/640 (8%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
+ +P TV S+++++ +K F +S+ + S M + + + VCA+L++
Sbjct: 72 ILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSA 131
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
GKQIHC+ SG + FV L Y C + +A++VFD + E + + S +L G
Sbjct: 132 FKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCG 191
Query: 160 YVQCNLMSDAFDVFIKMPK----KDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGEN 214
Y + + + + +M K ++V W ++SG+ +S G K A+ +F+ M G
Sbjct: 192 YARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRS--GYHKEAVIMFQKMHHLG-F 248
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P++ T SV+ + G+ +HG +IK G D+ + A+++ Y G ++
Sbjct: 249 CPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIK 308
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
++D E N+ I GL G ++ A +F E
Sbjct: 309 LFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQ--------------------- 347
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+ME N V+W S+I+G QN +AL+L+ M+ +
Sbjct: 348 -----------------------KMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
R T + AC + +L G+ H V+ +V+VG++L+DMY++CG I +Q
Sbjct: 385 KPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQI 444
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F+ + + N+ W +LMNGYS HG E + +FE ++ + P+ +F +LSAC + GL
Sbjct: 445 VFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504
Query: 515 VNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+EG K F M + YG+ P LEHY+C+V+LLGR+G L EA + IK++P E D+ VWGALL
Sbjct: 505 TDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALL 564
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
++C N+++ E AAQK+F L+ + YV++SNIYA G W + IR ++ L +KK
Sbjct: 565 NSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKK 624
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+PGCSWI++ ++V+ D+++P + I ++ ++ +
Sbjct: 625 NPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEM 664
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/535 (20%), Positives = 217/535 (40%), Gaps = 87/535 (16%)
Query: 105 QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
Q H +LKSG + ++ + L+ Y+N +A + + + +S ++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
L S + VF +M ++ P+ + ++
Sbjct: 96 LFSQSIGVFSRMFSHGLI---------------------------------PDTHVLPNL 122
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+ CA L AF GK +H + G + D + G+L Y C
Sbjct: 123 FKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRC------------------ 164
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
GR+ DA +F+R++E + ++ ++++ GYA G +++ R+ +M
Sbjct: 165 -------------GRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKS 211
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
I E N V+WN ++SG+ ++ H++A+ ++ M L + T S +
Sbjct: 212 GI-------------EPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSV 258
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
+ +L G+ +H +++K + V ++++DMY + G + F
Sbjct: 259 LPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMET 318
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
A + G S +GL +A+ +F + EQ + N ++ +++ C + G E +++FR
Sbjct: 319 GVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFRE 378
Query: 525 MKSYGVVP---TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMN 581
M+ GV P T+ + GH F + + D V AL+ M
Sbjct: 379 MQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALID-----MY 433
Query: 582 MEVGE-RAAQKMFG-LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
+ G + +Q +F + K + + L N Y++ GK + M I + L +K D
Sbjct: 434 AKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPD 488
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 216/499 (43%), Gaps = 95/499 (19%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
CGR G AR +FD+M + VV+ + +LCGY++ +E + ++S M +S ++ N +
Sbjct: 163 RCGRMGD---ARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVS 219
Query: 87 FSTILS-----------------------------VCAQLNSLID------GKQIHCLVL 111
++ ILS V + L S+ D G+QIH V+
Sbjct: 220 WNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVI 279
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
K G + V S +L Y + ++FDE + + + G + L+ A +
Sbjct: 280 KQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALE 339
Query: 172 VFIKMPKK----DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
+F ++ +VV WT +I+G A++ E AL+LFR M+ +G PN T S++ A
Sbjct: 340 MFGLFKEQKMELNVVSWTSIIAGCAQNGKDIE-ALELFREMQVAGVK-PNRVTIPSMLPA 397
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
C + A G+ HG ++ D +G ALI+ Y C
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKC--------------------- 436
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
GRI+ ++++FN + N + +NS++ GY+++G+ + +FE +
Sbjct: 437 ----------GRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESL------ 480
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY-MTMRKLAIDRTRSTFSVLFH 406
+ ++ + +++ S++S Q L ++ + + M + I +S + +
Sbjct: 481 -------MRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVN 533
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS---ISSPN 463
G LQ+ L + + PFE + V +L++ +++ A+ + + N
Sbjct: 534 LLGRAGKLQEAYDL---IKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPEN 590
Query: 464 VAAWTALMNGYSHHGLGSE 482
+ + N Y+ G+ +E
Sbjct: 591 PGTYVLMSNIYAAKGMWTE 609
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 221/682 (32%), Positives = 341/682 (50%), Gaps = 91/682 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFD---QMPIRTVVSWNTMLCGYSK----WAKFD- 66
E+ + N + R G L A +FD Q I V+SWN+++ + K W D
Sbjct: 194 ESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDL 253
Query: 67 -ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
++L+ +N + + + IL C L ++ K++H +++G FVG+ L
Sbjct: 254 FSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNAL 313
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DV 181
+ YA C +E A +VF+ + + + W+ M+ GY Q AF++F M K+ DV
Sbjct: 314 IDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDV 373
Query: 182 VVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
V WT +I+GY++ GC +AL LFR M SG ++PN T SV+ ACA LGAF +G +
Sbjct: 374 VTWTAVIAGYSQR--GCSHEALNLFRQMIFSG-SLPNCVTIISVLSACASLGAFSQGTEI 430
Query: 241 HGLLIK-CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
H +K C D GG
Sbjct: 431 HAYSLKNCLLTLDNDFGG------------------------------------------ 448
Query: 300 IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
ED +L+ YN++I Y+ ++ +F+ IP
Sbjct: 449 -EDEDLMV----------YNALIDMYSKCRSFKAARSIFDD---------------IPLE 482
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTM--RKLAIDRTRSTFSVLFHACSCLGSLQQG 417
ERN VTW MI G+ Q AL+L++ M + T S + AC+ L +++ G
Sbjct: 483 ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIG 542
Query: 418 QLLHAHLVKT-PFESNVY-VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+ +HA++++ +ES+ Y V L+DMYS+CG ++ A+ F S+S + +WT++M GY
Sbjct: 543 KQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYG 602
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTL 534
HG GSEA+ +F+ M + VP+ TF+ VL AC G+V++G+ F SM + YG+ P
Sbjct: 603 MHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRA 662
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY C +DLL RSG L +A +KDMP+E AVVW ALLSAC N+E+ E A K+
Sbjct: 663 EHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVE 722
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
++ + +Y ++SNIYA G+W IR + +KK PGCSW++ +F V DR
Sbjct: 723 MNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDR 782
Query: 655 NNPNCNVIYATLEHLTANLNSV 676
++P IYA LE L + ++
Sbjct: 783 SHPLSPQIYALLESLIDRIKAM 804
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 207/666 (31%), Positives = 327/666 (49%), Gaps = 59/666 (8%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS + + G + A L+++ P+ +V + M+ G+ + ++ +
Sbjct: 177 EKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFPVFRK 236
Query: 75 MHRSNVKLNETTFSTILSVCA-----QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY 129
M +V+ N T ++ C L + G + C + + E V + L+ Y
Sbjct: 237 MLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIE----VHNSLITLY 292
Query: 130 ANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
+ A RVFD++ + + W+ +L Y + A V MP ++ V W LI+
Sbjct: 293 LRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGARRVLDAMPARNEVSWGTLIA 352
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
+ + D E ALKL+ M G PN F SV+ ACA L G +H +K G
Sbjct: 353 RHEQKGDTAE-ALKLYSQMLADGCR-PNISCFSSVLSACATLQDLRGGTRIHANALKMGS 410
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
+ + +LI+ YC C+ A RV FN
Sbjct: 411 STNLFVSSSLIDMYCKCKQCTYAQRV-------------------------------FNS 439
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
L E N++ +NS+I GY+ G++ +++ LF KMP RN V+WN+M
Sbjct: 440 LPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMP-----------------ARNSVSWNTM 482
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
ISGY +N AL + M T S + AC+ L SL+ G+++HA +VK
Sbjct: 483 ISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGI 542
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
E N+++GT+L DMY++ G ++ ++ F + N WTA++ G + +G E++ LFE
Sbjct: 543 EDNIFMGTALSDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFED 602
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
M+E I PN TF+ +L AC GLV + + F +M+++G+ P +HYTC+VD+L R+G
Sbjct: 603 MIENGIAPNEHTFLAILFACSHCGLVEQAIHYFETMQAHGIPPKSKHYTCMVDVLARAGC 662
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
L EAEE + + ELD W +LLSAC + N E+GERAA+K+ L+K + YV+LSN+
Sbjct: 663 LPEAEELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNM 722
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
YA GKW + R + +KKD GCSW++L + HAF +P IY L+ L
Sbjct: 723 YASCGKWKDAAETRILMQGASLKKDAGCSWLQLRGQYHAFFSWKEKHPLSLEIYEILDLL 782
Query: 670 TANLNS 675
L +
Sbjct: 783 MLELTT 788
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 138/337 (40%), Gaps = 50/337 (14%)
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEAN---SISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+++L+ + R D + F A+ S +Y+ M+ + G + ++RLF MP
Sbjct: 118 ASNLLTAYAAFTRAADRDQAFRDCVAADAASSFTYDFMVSEHVKAGDIASARRLFYGMPE 177
Query: 344 RSIISLNTMISVIPE----------MERNPVT----WNSMISGYVQNNLHEKALQLYMTM 389
+S++S TM+ + + ER P+ + +MISG+V+N LH+ A ++ M
Sbjct: 178 KSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFPVFRKM 237
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGS 448
++ T + AC G + VK FE ++ V SL+ +Y R G
Sbjct: 238 LTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGD 297
Query: 449 INDAQASFSSISSPNVAAWTALMNGYS-------------------------------HH 477
A F + +V +WTAL++ Y+
Sbjct: 298 AAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGARRVLDAMPARNEVSWGTLIARHEQK 357
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
G +EA+ L+ ML PN + F VLSAC + G +I + G L
Sbjct: 358 GDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVS 417
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+ ++D+ + A+ +P E + V W +L+S
Sbjct: 418 SSLIDMYCKCKQCTYAQRVFNSLP-EKNTVCWNSLIS 453
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 206/678 (30%), Positives = 340/678 (50%), Gaps = 69/678 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMP--IRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
IV+ ++ G + A LF+ P IR VS+N M+ +S +L L M
Sbjct: 62 IVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQM 121
Query: 76 HRSNVKLNETTFSTILSVCAQL-NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
R + TFS++L + + + +Q+HC V K G V + L+ Y +C
Sbjct: 122 KRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCAS 181
Query: 135 ---------IEEAKRVFDELH--EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
+ A+++FDE +E W+ ++ GYV+ + + A ++ M V
Sbjct: 182 SPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVA 241
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
W +ISGY E+A L R M G + +EYT+ SVI A + G F G+ VH
Sbjct: 242 WNAMISGYVHR-GFYEEAFDLLRRMHSLGIQL-DEYTYTSVISAASNAGLFNIGRQVHAY 299
Query: 244 LIKCGFE----FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
+++ + F S+ ALI Y C G+
Sbjct: 300 VLRTVVQPSGHFVLSVNNALITLYTRC-------------------------------GK 328
Query: 300 IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
+ +A +F+++ + +S+N+++ G +++++ +F +MP RS++
Sbjct: 329 LVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLL------------ 376
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
TW MISG QN E+ L+L+ M+ ++ ++ +CS LGSL GQ
Sbjct: 377 -----TWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQ 431
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
LH+ +++ +S++ VG +L+ MYSRCG + A F ++ + +W A++ + HG
Sbjct: 432 LHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGH 491
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYT 538
G +A+ L+E ML++DI+P+ TF+ +LSAC AGLV EG F +M+ YG+ P +HY+
Sbjct: 492 GVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYS 551
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
++DLL R+G EA+ + MP E A +W ALL+ CW NME+G +AA ++ L +
Sbjct: 552 RLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQ 611
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
Y+ LSN+YA LG+W + +RK + VKK+PGCSWIE+ + VH F V+D +P
Sbjct: 612 QDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPE 671
Query: 659 CNVIYATLEHLTANLNSV 676
+ +Y LE L + +
Sbjct: 672 VHAVYRYLEQLVHEMRKL 689
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/523 (22%), Positives = 223/523 (42%), Gaps = 86/523 (16%)
Query: 95 AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
AQL+ + +H +L SG++ F + + L+ Y F I A+ +FD++ + + + +
Sbjct: 7 AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPK--KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
ML Y + A +F P +D V + +I+ ++ S DG AL+LF M+ G
Sbjct: 67 TMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDG-HAALQLFVQMKRLG 125
Query: 213 ENMPNEYTFDSVIRACARLG---AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+P+ +TF SV+ A + + C+ +H + K G S+ AL+ Y C
Sbjct: 126 -FVPDPFTFSSVLGALSLIADEETHCQQ--LHCEVFKWGALSVPSVLNALMSCYVSC--- 179
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA--NSISYNSMIKGYAV 327
AS+ L+N + M A +F+ + ++ ++I GY
Sbjct: 180 ----------------ASSPLVNSCVLMAA---ARKLFDEAPPGRRDEPAWTTIIAGYVR 220
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
+ ++ L E M + V WN+MISGYV +E+A L
Sbjct: 221 NDDLVAARELLEGM-----------------TDHIAVAWNAMISGYVHRGFYEEAFDLLR 263
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY----VGTSLVDMY 443
M L I T++ + A S G G+ +HA++++T + + + V +L+ +Y
Sbjct: 264 RMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLY 323
Query: 444 SRCGS-------------------------------INDAQASFSSISSPNVAAWTALMN 472
+RCG I +A + F + ++ WT +++
Sbjct: 324 TRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMIS 383
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
G + +G G E + LF M + + P + G +++C G ++ G ++ + G
Sbjct: 384 GLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDS 443
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+L ++ + R G + A+ MP +D+V W A+++A
Sbjct: 444 SLSVGNALITMYSRCGLVEAADTVFLTMPY-VDSVSWNAMIAA 485
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 157/368 (42%), Gaps = 34/368 (9%)
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
R A+L + VH ++ GF+ I LI+ YC A ++D++ P +
Sbjct: 4 RYLAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIV 63
Query: 286 ASNSLINGLISMGRIEDAELIFN--RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
A+ ++++ + G I+ A +FN ++ +++SYN+MI ++ + +LF +M
Sbjct: 64 AATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQM-- 121
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGY-VQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
+ +P+ P T++S++ + + QL+ + K S S
Sbjct: 122 -------KRLGFVPD----PFTFSSVLGALSLIADEETHCQQLHCEVFKWG---ALSVPS 167
Query: 403 VLFHACSCLGSLQQGQLLHAHLV----------KTPFESNVYVGTSLVDMYSRCGSINDA 452
VL SC S L+++ ++ P + T+++ Y R + A
Sbjct: 168 VLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAA 227
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ ++ AW A+++GY H G EA L M I + T+ V+SA A
Sbjct: 228 RELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNA 287
Query: 513 GLVNEGMKIFRSMKSYGVVPT----LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
GL N G ++ + V P+ L ++ L R G L EA MP++ D V
Sbjct: 288 GLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVS 346
Query: 569 WGALLSAC 576
W A+LS C
Sbjct: 347 WNAILSGC 354
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 204/664 (30%), Positives = 335/664 (50%), Gaps = 51/664 (7%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
K ++ N A + D +P V S++T++ +SK+ +F +LS S M +
Sbjct: 51 ATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGL 110
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ + + CA L++L +Q+H + SG++ FV S L+ Y C +I +A R
Sbjct: 111 MPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHR 170
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVD 196
VFD + E + + WS ++ Y + + +A +F +M + +++ W +I+G+ S
Sbjct: 171 VFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGL 230
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E L +F M G P+ T SV+ A L G ++HG +IK G D+ +
Sbjct: 231 YSEAVL-MFLDMHLRGFE-PDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVS 288
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
ALI+ Y C +V+D++++ + + N+ I GL
Sbjct: 289 SALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGL---------------------- 326
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S N GQV+ S RLF ++ + ME N V+W SMI+ QN
Sbjct: 327 SRN---------GQVESSLRLFRQLKDQG-------------MELNVVSWTSMIACCSQN 364
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
+AL+L+ M+ + T L AC + +L G+ H ++ ++VYVG
Sbjct: 365 GRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVG 424
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
++L+DMY++CG I ++ F I + N+ W A++ GY+ HG EA+ +F++M
Sbjct: 425 SALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQK 484
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P+ +F VLSAC ++GL EG F SM S YG+ +EHY C+V LL R+G L +A
Sbjct: 485 PDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYA 544
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
I+ MP+ DA VWGALLS+C N+ +GE AA+K+F L+ Y++LSNIYA G
Sbjct: 545 MIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGM 604
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
W + +R + + ++K+PGCSWIE+ ++VH D+++P I L+ L+ +
Sbjct: 605 WNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKK 664
Query: 676 VVLF 679
+ F
Sbjct: 665 LGYF 668
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/546 (22%), Positives = 224/546 (41%), Gaps = 90/546 (16%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T F+ + S A SL +Q H +LK+G + + LL YAN +A V
Sbjct: 14 VQHTIFNCLNSTTA---SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLV 70
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
D + E N +S ++ + + + A F +M + +
Sbjct: 71 LDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGL-------------------- 110
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
MP+ S ++ACA L A + VHG+ GF+ D + +L+
Sbjct: 111 -------------MPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVH 157
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
Y C A RV+DR+ P + +S++++
Sbjct: 158 MYIKCNQIRDAHRVFDRMFEP-------------------------------DVVSWSAL 186
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK 381
+ YA G VD++KRLF +M + + N ++WN MI+G+ + L+ +
Sbjct: 187 VAAYARQGCVDEAKRLFSEMGDSGV-------------QPNLISWNGMIAGFNHSGLYSE 233
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
A+ +++ M + +T S + A L L G L+H +++K S+ V ++L+D
Sbjct: 234 AVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALID 293
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY +C ++ F + +V + A + G S +G ++ LF + +Q + N +
Sbjct: 294 MYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVS 353
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG---HLHEAEEFIK 558
+ +++ C + G E +++FR M+ GV P C++ G H A F
Sbjct: 354 WTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSL 413
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF--GLDKKPISAYVILSNIYAVLGKW 616
I D V AL+ M + G A ++ G+ K + + + YA+ GK
Sbjct: 414 RRGISTDVYVGSALID-----MYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKA 468
Query: 617 GKKMDI 622
+ M+I
Sbjct: 469 KEAMEI 474
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 8/183 (4%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIR----TVVSWNTMLCGYSKWAKFDESLSLVSTM 75
S N I RNGQ+ ++ LF Q+ + VVSW +M+ S+ + E+L L M
Sbjct: 318 SCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREM 377
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ VK N T +L C + +L+ GK HC L+ G +VGS L+ YA C I
Sbjct: 378 QIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRI 437
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGY 191
+ ++ FD + N + W+ ++ GY +A ++F M K D++ +T ++S
Sbjct: 438 QASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSAC 497
Query: 192 AKS 194
++S
Sbjct: 498 SQS 500
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 208/664 (31%), Positives = 337/664 (50%), Gaps = 62/664 (9%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPI-RTVVSWNTMLCGYSKWAK-FD 66
+ + ++ +VS A+ G+ G L + L + R VV +L GY+K D
Sbjct: 217 EGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLD 276
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
++ M NE T+STI++ +Q + D ++ + +GL
Sbjct: 277 SAVKFFEGM----AARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGL- 331
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
A I++AK +FD++HE N + W+ M+ GY+Q ++ +A D+F +MP ++ + W
Sbjct: 332 ---ARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAG 388
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
+I+GYA++ E+AL + + G S AC+ + A GK VH L +K
Sbjct: 389 MIAGYARN-GRSEQALVSLQALHRKGMLPSLSSLTSSFF-ACSNIEALETGKQVHSLAVK 446
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
G +F+ + ALI Y G R S+G + I
Sbjct: 447 AGCQFNSYVCNALITLY-------GKYR---------------------SIGSVRQ---I 475
Query: 307 FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
F+R+T +++SYNS + D+++ +F MP ++S W
Sbjct: 476 FDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVS-----------------W 518
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
++IS Q + +A++++ +M ++L LG+ Q GQ +H +K
Sbjct: 519 TTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIK 578
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+S + V +LV MY +C S D+ F S+ ++ W ++ GY+ HGLG EA+ +
Sbjct: 579 LGMDSGLVVANALVSMYFKCSSA-DSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRM 637
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLG 545
+++M+ ++PN TFVG+L AC +GLV+EG + F+SM S YG+ P LEHY C+VDLLG
Sbjct: 638 YQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLG 697
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G + AE FI DMPIE D+V+W ALL AC N+E+G RAA+K+F ++ YV+
Sbjct: 698 RAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVM 757
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
LSNIY+ G W + +RK + V KDPGCSW+++ +++H+F D + IYAT
Sbjct: 758 LSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYAT 817
Query: 666 LEHL 669
L L
Sbjct: 818 LWEL 821
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 156/548 (28%), Positives = 272/548 (49%), Gaps = 46/548 (8%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
I E GR G+L AR +FD MP R +++WN+M+ Y D SL + N++
Sbjct: 40 IRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLR--- 96
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG-------SGLLFFYANCFEIEE 137
T + +LS A+ + D +++ F+ +G + ++ Y +I
Sbjct: 97 -TGTILLSGYARAGRVRDARRV-----------FDGMGVRNTVAWNAMVTCYVQNGDITL 144
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+++FD + + W+ ML GY LM +A ++F +MP+++ V WT +ISGY ++
Sbjct: 145 ARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVL-IEQ 203
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+A +FR M G P + SV+ A LG + +H L+ K GFE D +G
Sbjct: 204 HGRAWDMFRTMLCEGMT-PEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGT 262
Query: 258 ALIEFYC-GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
A++ Y D A++ ++ + +++I L GRI+DA ++ R +
Sbjct: 263 AILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVP 322
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS------VIPEME--------RN 362
S SM+ G A YG++DD+K LF+++ +++S N MI+ ++ E E RN
Sbjct: 323 SRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRN 382
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
++W MI+GY +N E+AL + + + + S+ + F ACS + +L+ G+ +H+
Sbjct: 383 TISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHS 442
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
VK + N YV +L+ +Y + SI + F ++ + ++ + M+ + L E
Sbjct: 443 LAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDE 502
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
A +F M D+V ++ ++SAC +A NE ++IFRSM +P T
Sbjct: 503 ARDVFNNMPSPDVV----SWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTI--- 555
Query: 543 LLGRSGHL 550
LLG SG+L
Sbjct: 556 LLGLSGNL 563
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 166/376 (44%), Gaps = 30/376 (7%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG-GALIEFYCGCEAFDGAMR 274
P + IR RLG E + V F + I ++I YC D
Sbjct: 31 PGTSAQSARIRELGRLGRLHEAREVFD-----SMPFRDIIAWNSMIFAYCNNGMPDAGRS 85
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
+ D + L L++G GR+ DA +F+ + N++++N+M+ Y G + +
Sbjct: 86 LADAISGGNLRTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLA 145
Query: 335 KRLFEKMPHRSIISLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQNNLHE 380
++LF+ MP R + S NTM++ + M ERN V+W MISGYV H
Sbjct: 146 RKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHG 205
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+A ++ TM + + + A LG + +H + KT FE +V VGT+++
Sbjct: 206 RAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAIL 265
Query: 441 DMYSR-CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+ Y++ ++ A F +++ N W+ ++ S G +A ++ ++D + +
Sbjct: 266 NGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVY----QRDPLKSV 321
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
+ +L+ R G +++ +F + P + + ++ ++ + EAE+
Sbjct: 322 PSRTSMLTGLARYGRIDDAKILFDQIHE----PNVVSWNAMITGYMQNEMVDEAEDLFNR 377
Query: 560 MPIELDAVVWGALLSA 575
MP + + W +++
Sbjct: 378 MPFR-NTISWAGMIAG 392
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 206/652 (31%), Positives = 342/652 (52%), Gaps = 70/652 (10%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSW-------------------------- 52
VS N I C +G++ AR+LFD MP R SW
Sbjct: 74 VSWNAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRMPGD 133
Query: 53 ------NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
N M+ GY+K +FD++++L+ M ++ +++++L + +G+ +
Sbjct: 134 KCTACYNAMISGYAKHGRFDDAVALLREMPAPDI----ISWNSVLVGLTR-----NGEMV 184
Query: 107 HCLVLKSGYECFEFVGSGLLF-FYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNL 165
+ + V L+ Y +++ A +F + N + W +L GY +
Sbjct: 185 RAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGR 244
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
+ +A ++F ++P ++V W ++SGY + + E+A KLF M + N ++ ++I
Sbjct: 245 IGEARELFDRIPDRNVAAWNVMLSGYLR-LSHMEEAYKLFTEMPDK-----NSISWTTMI 298
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
A R G E K LL K F+ + AL+ Y + D A ++D LE
Sbjct: 299 SALVRGGKLQEAK---DLLDKMPFD-SFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAV 354
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
N++I+G + G +++A ++F ++ + +S+N+MI GYA GQ+ + +F KM
Sbjct: 355 CWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMN--- 411
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
+RN V+WNS+ISG+VQN L +ALQ ++ MR+ A ST++
Sbjct: 412 --------------QRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCL 457
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
AC+ L +L G+ H+ L ++ + + + G +L+ Y++CG I +A+ F + +P++
Sbjct: 458 SACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIV 517
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
+W AL++GY+ +G G+EA+ +F M + D+ P+ TFVGVLSAC AGL++EG F SM
Sbjct: 518 SWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSM 577
Query: 526 -KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
K Y + P EHY C+VDLLGRSG L EA E I+ M ++ +A VWGA+L AC N E+
Sbjct: 578 TKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHEL 637
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPG 636
+ AA+K++ L+ S YV+LSNI A GKW + ++R + V K PG
Sbjct: 638 AQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTPG 689
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 170/415 (40%), Gaps = 95/415 (22%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I+S N + RNG++V A FD+MP R +VSWN ML GY + D + L + +
Sbjct: 167 IISWNSVLVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPS 226
Query: 78 SNV---------------------------KLNETTFSTILSVCAQL------------- 97
NV N ++ +LS +L
Sbjct: 227 PNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEM 286
Query: 98 ------------NSLIDGKQIH---CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
++L+ G ++ L+ K ++ F + L+ Y I++A+ +F
Sbjct: 287 PDKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFA-AKTALMHGYLQSKMIDDARLIF 345
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG----- 197
D L + + W+ M+ GYV C ++ +A +F +MP KD+V W +I+GYA DG
Sbjct: 346 DGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAH--DGQMRKA 403
Query: 198 ---------------------------CEKALKLFRWMRESGENMPNEYTFDSVIRACAR 230
C +AL+ F MR + + T+ + ACA
Sbjct: 404 VGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKR-ADWSTYACCLSACAD 462
Query: 231 LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSL 290
L A G+ H LL + G+ D G ALI Y C A +V+D + P + + N+L
Sbjct: 463 LAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNAL 522
Query: 291 INGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
I+G S G +A +F + + + +++ ++ + G +D+ F M
Sbjct: 523 IDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSM 577
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 150/309 (48%), Gaps = 33/309 (10%)
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
A R++D + + + N++++ L GRI DA +F+ + N++S+N+MI + +G+
Sbjct: 29 AARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGR 88
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPE----------MERNP-----VTWNSMISGYVQ 375
V D++ LF+ MP R S M+S ++R P +N+MISGY +
Sbjct: 89 VADARDLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAK 148
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
+ + A+ L +R++ S SVL +G + G+++ A + V
Sbjct: 149 HGRFDDAVAL---LREMPAPDIISWNSVL------VGLTRNGEMVRAVKFFDEMPARDMV 199
Query: 436 GTSL-VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+L ++ Y R G ++ A F+ + SPNV +W L+NGY G EA LF+ + ++
Sbjct: 200 SWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGRIGEARELFDRIPDR- 258
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
N A + +LS +R + E K+F M + +T ++ L R G L EA+
Sbjct: 259 ---NVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSIS----WTTMISALVRGGKLQEAK 311
Query: 555 EFIKDMPIE 563
+ + MP +
Sbjct: 312 DLLDKMPFD 320
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 144/333 (43%), Gaps = 68/333 (20%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS N I +GQ+ A +F +M R VSWN+++ G+ + E+L M R
Sbjct: 384 MVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRR 443
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + +T++ LS CA L +L G+Q H L+ +SGY F G+ L+ YA C I E
Sbjct: 444 DAKRADWSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILE 503
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++VFDE+ + + W+ ++ GY ++A VF +M DV
Sbjct: 504 ARQVFDEMPAPDIVSWNALIDGYASNGHGTEAISVFREMEDNDV---------------- 547
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
P+E TF V+ AC+ H LI GF+F S+
Sbjct: 548 -----------------RPDEVTFVGVLSACS-----------HAGLIDEGFDFFNSM-- 577
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEANSI 316
D A+R P +++ L GR+ +A E+I + N+
Sbjct: 578 ----------TKDYALR-------PVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAG 620
Query: 317 SYNSMIKGYAVYGQVD----DSKRLFEKMPHRS 345
+ +M+ V+ + +++L+E PH++
Sbjct: 621 VWGAMLGACRVHKNHELAQLAAEKLYELEPHKT 653
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 205/645 (31%), Positives = 334/645 (51%), Gaps = 88/645 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL-VSTMHRSNVKLNETTFSTILSVCA 95
A+ +FDQ+P + +WNT++ Y+ + +SL + + +H+S ++ TF ++ +
Sbjct: 88 AQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+L L GK H +V+K F+ + L+ FYA C E+
Sbjct: 148 ELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELG------------------- 188
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGEN 214
+GY VF+ +P++DVV W +I+ + + GC E+AL+LF+ M E+
Sbjct: 189 --LGY----------RVFVNIPRRDVVSWNSMITAFVQG--GCPEEALELFQEM-ETQNV 233
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
PN T V+ ACA+ F G+ VH + + ++ A+++ Y C
Sbjct: 234 KPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKC-------- 285
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
G +EDA+ +F+++ E + +S+ +M+ GYA G+ D +
Sbjct: 286 -----------------------GSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAA 322
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY--MTMRKL 392
+ +F+ MP++ I WN++IS Y Q ++AL+L+ + + K
Sbjct: 323 QGIFDAMPNQDI-----------------AAWNALISAYEQCGKPKEALELFHELQLSKT 365
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
A + S L AC+ LG++ G +H ++ K + N ++ TSL+DMY +CG + A
Sbjct: 366 AKPDEVTLVSTL-SACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKA 424
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
F S+ +V W+A++ G + HG G +A+ LF M E + PNA TF +L AC
Sbjct: 425 LMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHV 484
Query: 513 GLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GLV EG F M+ YGV+P ++HY C+VD+LGR+G L EA E I+ MP+ A VWGA
Sbjct: 485 GLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGA 544
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
LL AC N+ + E+A ++ L+ AYV+LSNIYA GKW + +RK + + +
Sbjct: 545 LLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGL 604
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
KK+PGCS IE++ VH F V D ++P+ IYA L+ + A L ++
Sbjct: 605 KKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETI 649
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 211/431 (48%), Gaps = 23/431 (5%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I + G+L +F +P R VVSWN+M+ + + +E+L L M NVK
Sbjct: 175 NSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVK 234
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
N T +LS CA+ + G+ +H + ++ + + +L Y C +E+AKR+
Sbjct: 235 PNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRL 294
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD++ E + + W+ MLVGY + A +F MP +D+ W LIS Y + ++A
Sbjct: 295 FDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAY-EQCGKPKEA 353
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
L+LF ++ S P+E T S + ACA+LGA G +H + K G + + + +LI+
Sbjct: 354 LELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLID 413
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSIS 317
YC C A+ V+ +E + +++I GL G +DA +F+++ E N+++
Sbjct: 414 MYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVT 473
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+ +++ + G V++ + F +M + V+P ++ + M+ +
Sbjct: 474 FTNILCACSHVGLVEEGRTFFNQM--------ELVYGVLPGVKH----YACMVDILGRAG 521
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVG 436
L E+A++L + K+ + S + L AC+ ++ + + L++ P YV
Sbjct: 522 LLEEAVEL---IEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYV- 577
Query: 437 TSLVDMYSRCG 447
L ++Y++ G
Sbjct: 578 -LLSNIYAKAG 587
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 165/412 (40%), Gaps = 92/412 (22%)
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYC--GCEAFDGAMRVYDRLENPCLNASNSLINGLI 295
K +H +++ G FD LI + D A +V+D++ +P L N+LI
Sbjct: 52 KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYA 111
Query: 296 SMGRIEDAELIFNR----------------------------------------LTEANS 315
S + LIF R L ++
Sbjct: 112 SSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDV 171
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
NS+I YA G++ R+F +P R ++S WNSMI+ +VQ
Sbjct: 172 FILNSLIHFYAKCGELGLGYRVFVNIPRRDVVS-----------------WNSMITAFVQ 214
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
E+AL+L+ M + T + AC+ + G+ +H+++ + ++ +
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTL 274
Query: 436 GTSLVDMYSRCGSIND-------------------------------AQASFSSISSPNV 464
+++DMY++CGS+ D AQ F ++ + ++
Sbjct: 275 SNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDI 334
Query: 465 AAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
AAW AL++ Y G EA+ LF E+ L + P+ T V LSAC + G ++ G I
Sbjct: 335 AAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHV 394
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+K G+ T ++D+ + G L +A + + D VW A+++
Sbjct: 395 YIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERK-DVFVWSAMIAG 445
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 153/325 (47%), Gaps = 30/325 (9%)
Query: 305 LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV 364
L F+ + + I+ ++ + + +D ++++F+++PH N
Sbjct: 63 LFFDPFSASRLITAAAL----SPFPSLDYAQQVFDQIPHP-----------------NLY 101
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAID-RTRSTFSVLFHACSCLGSLQQGQLLHAH 423
TWN++I Y ++ ++L +++ M + D + TF L A S L L G+ H
Sbjct: 102 TWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGM 161
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
++K S+V++ SL+ Y++CG + F +I +V +W +++ + G EA
Sbjct: 162 VIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEA 221
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
+ LF+ M Q++ PN T VGVLSAC + G + ++ + +L ++D+
Sbjct: 222 LELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDM 281
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE-RAAQKMF-GLDKKPIS 601
+ G + +A+ MP E D V W +L ++GE AAQ +F + + I+
Sbjct: 282 YTKCGSVEDAKRLFDKMP-EKDIVSWTTMLVG-----YAKIGEYDAAQGIFDAMPNQDIA 335
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRL 626
A+ L + Y GK + +++ L
Sbjct: 336 AWNALISAYEQCGKPKEALELFHEL 360
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E IVS + + G+ A+ +FD MP + + +WN ++ Y + K E+L L
Sbjct: 300 EKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHE 359
Query: 75 MHRSNV-KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+ S K +E T + LS CAQL ++ G IH + K G + + + L+ Y C
Sbjct: 360 LQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCG 419
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++++A VF + + +WS M+ G DA +F KM + V
Sbjct: 420 DLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKV------------ 467
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
PN TF +++ AC+ +G EG+
Sbjct: 468 ---------------------KPNAVTFTNILCACSHVGLVEEGRT 492
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/649 (29%), Positives = 347/649 (53%), Gaps = 24/649 (3%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +FD+ P++ WNT++ + K++++L L M ++ K + T +L C +
Sbjct: 185 ANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGK 244
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L +L +GKQIH V++ G + + ++ Y+ +E A+ FD + N W+ +
Sbjct: 245 LRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSI 304
Query: 157 LVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
+ Y + ++ A+D+ +M K D++ W L+SG+ E L FR ++ +G
Sbjct: 305 ISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQ-GSYENVLTNFRSLQSAG 363
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
P+ + S ++A LG F GK +HG +++ E+D + +L++ Y + D A
Sbjct: 364 FK-PDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKA 422
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVY 328
V+ +N + A NSLI+G G ++AE + N++ E + +++NS++ GY++
Sbjct: 423 EVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMS 482
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G+ +++ ++I+ + + P N V+W +MISG QN + ALQ +
Sbjct: 483 GRSEEA---------LAVINRIKSLGLTP----NVVSWTAMISGCCQNENYMDALQFFSQ 529
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M++ + +T L AC+ L+ G+ +H ++ F ++Y+ T+L+DMY + G
Sbjct: 530 MQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGK 589
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+ A F +I + W +M GY+ +G G E LF+ M + + P+A TF +LS
Sbjct: 590 LKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSG 649
Query: 509 CVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C +GLV +G K F SMK+ Y + PT+EHY+C+VDLLG++G L EA +FI +P + DA
Sbjct: 650 CKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADAS 709
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
+WGA+L+AC ++++ E AA+ + L+ + Y ++ NIY+ +WG +++ +T
Sbjct: 710 IWGAVLAACRLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRWGDVERLKESMT 769
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
L VK SWI++ +H FS E +++P IY L L + + +
Sbjct: 770 ALGVKIPNVWSWIQVKQTIHVFSTEGKSHPEEGEIYFELYQLISEIKKL 818
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 136/595 (22%), Positives = 257/595 (43%), Gaps = 91/595 (15%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA-KFDESLSLVSTMHRSNVKLNETTFSTI 90
G +A +F R + WN+ + ++ + E L++ +H VK + + +
Sbjct: 78 GDFESATKVFFVGFARNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVV 137
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L +C L L G ++H ++K G+ + L+ Y I+ A +VFDE +
Sbjct: 138 LKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQED 197
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
LW+ +++ ++ DA ++F +M S AK+ DG
Sbjct: 198 FLWNTIVMANLRSEKWEDALELFRRMQ-----------SASAKATDG------------- 233
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
T +++AC +L A EGK +HG +I+ G
Sbjct: 234 ---------TIVKLLQACGKLRALNEGKQIHGYVIRFG---------------------- 262
Query: 271 GAMRVYDRLENPCLNASNSLINGLISM----GRIEDAELIFNRLTEANSISYNSMIKGYA 326
R+ N S+ N ++SM R+E A + F+ + NS S+NS+I YA
Sbjct: 263 -------RVSN------TSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYA 309
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
V ++ + L ++M V P++ +TWNS++SG++ +E L +
Sbjct: 310 VNDCLNGAWDLLQEMESS---------GVKPDI----ITWNSLLSGHLLQGSYENVLTNF 356
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
+++ + + A LG G+ +H +++++ E +VYV TSLVD Y +
Sbjct: 357 RSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKN 416
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
++ A+ F + N+ AW +L++GY++ GL A L M E+ I P+ T+ ++
Sbjct: 417 DCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLV 476
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP---IE 563
S +G E + + +KS G+ P + +T ++ ++ + +A +F M ++
Sbjct: 477 SGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVK 536
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
++ LL AC +++GE F + + I + + + GK GK
Sbjct: 537 PNSTTICTLLRACAGSSLLKIGEEI--HCFSMRHGFLDDIYIATALIDMYGKGGK 589
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G+L A +F + +T+ WN M+ GY+ + +E +L M ++ V+ + TF+
Sbjct: 585 GKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFT 644
Query: 89 TILSVCAQLNSLIDG 103
+LS C ++DG
Sbjct: 645 ALLSGCKNSGLVMDG 659
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 77/177 (43%), Gaps = 3/177 (1%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESN-VYVGTSLVDMYSRCGSINDAQASFSSI 459
FS FH + +L + LHA ++K P + N V + S++ Y + G A F
Sbjct: 31 FSPFFHPFGEIRTLNSVRELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVG 90
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVL-LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ N W + + ++ G S +L +F+ + ++ + ++ VL C+ + G
Sbjct: 91 FARNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLG 150
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
M++ + G + +++L + + A + + P++ D +W ++ A
Sbjct: 151 MEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQED-FLWNTIVMA 206
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/507 (36%), Positives = 277/507 (54%), Gaps = 35/507 (6%)
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDG--CEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
VF +MP+ + W ++ A++ D +AL LF M G PN +TF SV++ACA
Sbjct: 74 VFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACA 133
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
R EGK +HGL++K GF DE + L+ Y C + A ++ C N +
Sbjct: 134 RASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLF------CKNVVD- 186
Query: 290 LINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
+G M + R + N + +N MI G G + +K LF++MP RS++S
Sbjct: 187 -FDGSCQME-------LDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVS- 237
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
WN MISGY QN +A+ L+ M+ ID T + A +
Sbjct: 238 ----------------WNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIA 281
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+G+L+ G+ +H + K E + +G++LVDMYS+CGSI+ A F ++ N W+A
Sbjct: 282 RIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSA 341
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSY 528
++ ++ HG +A++ F +M + + PN ++G+LSAC AGLV EG F M K
Sbjct: 342 IIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVV 401
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P +EHY C+VDLLGR+GHL EAEE I++MPIE D V+W ALL AC N+++GER
Sbjct: 402 GLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERV 461
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A+ + L +YV LSN+YA LG W +R ++ ++++KDPGCSWIE++ +H
Sbjct: 462 AETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHE 521
Query: 649 FSVEDRNNPNCNVIYATLEHLTANLNS 675
F VED ++ I A L ++ L S
Sbjct: 522 FLVEDDSHSKAKEIQAMLGEMSMKLRS 548
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 232/473 (49%), Gaps = 47/473 (9%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVT-ARNLFDQMPIRTVVSWNTMLCGYS 60
+L+A +T Q+ L + + I C + + + AR +F QMP WNT+L +
Sbjct: 37 QLHAIFIKTGQIQDPLTAA--EVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRILA 94
Query: 61 KWAK---FDESLSLVSTMH-RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYE 116
+ E+L L S M VK N TF ++L CA+ + L +GKQIH L++K G+
Sbjct: 95 ETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFH 154
Query: 117 CFEFVGSGLLFFYANCFEIEEAKRVF---------------DELHED-NELLWSLMLVGY 160
EFV S L+ Y C +E+A +F D+ +D N +LW++M+ G
Sbjct: 155 EDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQ 214
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
V+ + A ++F +MP + VV W +ISGYA++ E A+ LF+ M+ S + PN T
Sbjct: 215 VRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIE-AINLFQEMQSSNID-PNYVT 272
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
SV+ A AR+GA GK +H K E D+ +G AL++ Y C + D A++V++ L
Sbjct: 273 LVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLP 332
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKR 336
+++I GR EDA + F+ + +A N ++Y ++ + G V++ +
Sbjct: 333 KRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRS 392
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
F M ++ + P +E + M+ + E+A +L +R + I+
Sbjct: 393 FFSHMV--------KVVGLQPRIEH----YGCMVDLLGRAGHLEEAEEL---IRNMPIEP 437
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGS 448
+ L AC +L+ G+ + L++ P +S YV +L ++Y+ G+
Sbjct: 438 DDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYV--ALSNLYASLGN 488
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 129/330 (39%), Gaps = 74/330 (22%)
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
I G+I+D LT A I + + +D ++ +F +MP + NT++
Sbjct: 42 FIKTGQIQDP------LTAAEVIKFCAFSSR-----DIDYARAVFRQMPEPNCFCWNTIL 90
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR-KLAIDRTRSTFSVLFHACSCLG 412
++ E +L +AL L+ M + R TF + AC+
Sbjct: 91 RILAETN--------------DEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARAS 136
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC-------------------------- 446
L++G+ +H +VK F + +V ++LV MY C
Sbjct: 137 RLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELD 196
Query: 447 ---------------------GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
G I A+ F + +V +W +++GY+ +G EA+
Sbjct: 197 KRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAIN 256
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
LF+ M +I PN T V VL A R G + G I V + +VD+
Sbjct: 257 LFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYS 316
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G + +A + + +P + +A+ W A++ A
Sbjct: 317 KCGSIDKALQVFETLP-KRNAITWSAIIGA 345
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 213/703 (30%), Positives = 344/703 (48%), Gaps = 93/703 (13%)
Query: 17 LIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
L+V N A + + A +FD+MP R V SW M+ G ++ F + M
Sbjct: 154 LMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEML 213
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
S + ++ +S I+ C L+SL GK +H ++ G+ FV + LL YA IE
Sbjct: 214 NSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIE 273
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
++ VF+ + E N++ W+ M+ G L +AFD+F++M
Sbjct: 274 DSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRM-------------------- 313
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
++G PN YT SV +A +L GK V + G E + +G
Sbjct: 314 -------------KNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVG 360
Query: 257 GALIEFYCGCEAFDGAMRVYD-RLENPCLNAS-NSLINGLISMGRIEDA-EL-------- 305
ALI+ Y C + A V+D N +N N++I+G G ++A EL
Sbjct: 361 TALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNG 420
Query: 306 ----------IFNRLTEANSISYNSMIKG---------------------YAVYGQVDDS 334
+FN + + S+ + ++ G Y+ G ++D
Sbjct: 421 ITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDV 480
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+++F++M R I+S W ++++ Y Q++L E+AL + MR+
Sbjct: 481 RKVFDRMEERDIVS-----------------WTTLVTAYSQSSLGEEALATFCLMREEGF 523
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ TFS + +C+ L L+ G+ +H L K ++ + ++L+DMY++CGSI +A
Sbjct: 524 APNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGK 583
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F IS+P++ +WTA+++GY+ HGL +A+ LF M I NA T + VL AC G+
Sbjct: 584 VFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGM 643
Query: 515 VNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V EG+ F+ M+ YGVVP +EHY C++DLLGR G L +A EFI+ MP+E + +VW LL
Sbjct: 644 VEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLL 703
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
C N+E+GE AA+K+ + + + YV+LSN Y G + + +R + VKK
Sbjct: 704 GGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKK 763
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+PG SWI + RVH F D+ +P IY LE L + ++
Sbjct: 764 EPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAM 806
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 209/684 (30%), Positives = 349/684 (51%), Gaps = 65/684 (9%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSK 61
YA Q +++ I T C +G + AR +F++ P+ R V +N M+ G+S
Sbjct: 67 YARQLFDEISEPDKIARTTMVSGYCA-SGDITLARGVFEKAPVCMRDTVMYNAMITGFSH 125
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQ---IHCLVLKSGYECF 118
+++L M K + TF+++L+ A + D KQ H LKSG
Sbjct: 126 NNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVAD--DEKQCVQFHAAALKSGAGYI 183
Query: 119 EFVGSGLLFFYANCFE----IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI 174
V + L+ Y+ C + A++VFDE+ E +E W+ M+ GYV+ ++
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLE 243
Query: 175 KMPKK-DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
M +V + +ISGY ++AL++ R M SG + +E+T+ SVIRACA G
Sbjct: 244 GMDDNMKLVAYNAMISGYVNR-GFYQEALEMVRRMVSSGIEL-DEFTYPSVIRACATAGL 301
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
GK VH ++ R E+ + NSL++
Sbjct: 302 LQLGKQVHAYVL--------------------------------RREDFSFHFDNSLVSL 329
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
G+ ++A IF ++ + +S+N+++ GY G + ++K +F++M
Sbjct: 330 YYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK----------- 378
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
E+N ++W MISG +N E+ L+L+ M++ + FS +C+ LG+
Sbjct: 379 ------EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
GQ HA L+K F+S++ G +L+ MY++CG + +A+ F ++ + +W AL+
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAA 492
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVP 532
HG G+EAV ++E ML++ I P+ T + VL+AC AGLV++G K F SM++ Y + P
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPP 552
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+HY ++DLL RSG +AE I+ +P + A +W ALLS C NME+G AA K+
Sbjct: 553 GADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKL 612
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
FGL + Y++LSN++A G+W + +RK + VKK+ CSWIE+ ++VH F V+
Sbjct: 613 FGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVD 672
Query: 653 DRNNPNCNVIYATLEHLTANLNSV 676
D ++P +Y L+ L + +
Sbjct: 673 DTSHPEAEAVYIYLQDLGKEMRRL 696
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 187/466 (40%), Gaps = 133/466 (28%)
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
+ VHG +I GF+ I LI+ YC + A +++D + P A ++++G +
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 297 MGRIEDAELIFNR--LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS--------- 345
G I A +F + + +++ YN+MI G++ + LF KM H
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 346 ------------------------------IISL-NTMISVIPEMERNPV---------- 364
I S+ N ++SV + +P
Sbjct: 153 SVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212
Query: 365 --------TWNSMISGYVQN--------------------------------NLHEKALQ 384
+W +M++GYV+N +++AL+
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALE 272
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
+ M I+ T+ + AC+ G LQ G+ +HA++++ + + + SLV +Y
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYY 331
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+CG ++A+A F + + ++ +W AL++GY G EA L+F+ M E++I+ +++
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL----SWMI 387
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVP-------------------------------- 532
++S G EG+K+F MK G P
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG 447
Query: 533 ---TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+L ++ + + G + EA + + MP LD+V W AL++A
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAA 492
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 33/129 (25%)
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT---- 468
SLQ + +H +++ F+ ++ L+D+Y + +N A+ F IS P+ A T
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 469 -----------------------------ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
A++ G+SH+ G A+ LF M + P+
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 500 ATFVGVLSA 508
TF VL+
Sbjct: 149 FTFASVLAG 157
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 207/678 (30%), Positives = 336/678 (49%), Gaps = 82/678 (12%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTM---------------------LCGYSKWA 63
+ E + G +V+AR LFD MP R+VVS+ TM LC +
Sbjct: 155 VREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFT 214
Query: 64 KF----------DESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS 113
++L + M V NE T +++ C I L +KS
Sbjct: 215 AMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKS 274
Query: 114 GYECFEF-VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
V + L+ Y + + A+R+FDE+ + + W+ +L Y + + A V
Sbjct: 275 NLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRV 334
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
+MP+++ V W L++ + + + E A+ L+ M G PN F SV+ ACA L
Sbjct: 335 LDEMPERNEVSWGTLVARHEQKGNAKE-AVSLYSQMLADGCR-PNISCFSSVLGACASLQ 392
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
G+ +H +K + + ALI+ YC C+
Sbjct: 393 DLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCK------------------------- 427
Query: 293 GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
++ DA++IF L + N + +NS+I GY+ ++ +++ LF+KMP R++ S
Sbjct: 428 ------QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVAS---- 477
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
WNS+ISGY QN AL+ + M TFS + AC+ L
Sbjct: 478 -------------WNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLC 524
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
SL+ G+++HA ++K + +++VGT+L DMY++ G ++ ++ F + N AWTA++
Sbjct: 525 SLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQ 584
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
G + +G E++LLFE M+ I PN TF+ +L AC +GLV M F M++ G+ P
Sbjct: 585 GLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISP 644
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+HYTC+VD+L R+GHL EAE+ + + + +A W ALLSAC + N E+GERAA+++
Sbjct: 645 KAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRL 704
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
LDK + YV+LSN+YA GKW ++R + + +KKD GCSW+++ + AF
Sbjct: 705 QELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIRGQYQAFFSW 764
Query: 653 DRNNPNCNVIYATLEHLT 670
+ +P +Y L+ LT
Sbjct: 765 ETKHPLLPDVYEMLDLLT 782
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 51/310 (16%)
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT------- 365
A+ +Y+ M++ + G + ++RLF+ MP RS++S TM+ + M+R V
Sbjct: 146 ASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDAL--MKRGSVRDAVELYR 203
Query: 366 ---------WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
+ +MI+G+V N L + AL ++ M + T + AC G
Sbjct: 204 QCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDL 263
Query: 417 GQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+ +K+ + N+ V SL+ +Y R G + A+ F + +V +WTAL++ Y+
Sbjct: 264 AMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 476 -------------------------------HHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
G EAV L+ ML PN + F
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSS 383
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
VL AC + G KI + + ++D+ + L +A+ +P +
Sbjct: 384 VLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP-QK 442
Query: 565 DAVVWGALLS 574
+ V W +L+S
Sbjct: 443 NIVCWNSLIS 452
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 219/689 (31%), Positives = 341/689 (49%), Gaps = 93/689 (13%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
++G + AR +FD M R + SW M+ G ++ + E+ SL M R+ N TT+
Sbjct: 366 AKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYL 425
Query: 89 TIL--SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+IL S A ++L K +H ++G+ +G+ L+ YA C I++A+
Sbjct: 426 SILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARL------ 479
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLF 205
VF M +DV+ W ++ G A+ +GC +A +F
Sbjct: 480 -------------------------VFDGMCDRDVISWNAMMGGLAQ--NGCGHEAFTVF 512
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M++ G +P+ T+ S++ A VH ++ G D +G A I Y
Sbjct: 513 LQMQQEGL-VPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIR 571
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLING-------------LISMGR---IEDAELIFNR 309
C + D A ++D+L + N++I G + M R I DA N
Sbjct: 572 CGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINI 631
Query: 310 L-------------------TEANSISY---NSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
L T+A + N+++ Y+ G V +K++F+ M
Sbjct: 632 LSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDM------ 685
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
+ERN TW MI G Q+ A ++ M + I +T+ + A
Sbjct: 686 -----------VERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSA 734
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ G+L+ + +H H V S++ VG +LV MY++CGSI+DA++ F + +V +W
Sbjct: 735 CASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSW 794
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
T ++ G + HG G EA+ F M + PN ++V VL+AC AGLV+EG + F SM +
Sbjct: 795 TVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQ 854
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
YG+ PT+EHYTC+VDLLGR+G L EAE FI +MPIE D WGALL AC + N+E+ E
Sbjct: 855 DYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAE 914
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
AA++ L K S YV+LSNIYA GKW +K+ +R + ++K+PG SWIE+++R+
Sbjct: 915 FAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRI 974
Query: 647 HAFSVEDRNNPNCNVIYATLEHLTANLNS 675
H+F V D ++P IYA L L L +
Sbjct: 975 HSFVVGDTSHPESKEIYAQLNDLIERLKA 1003
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 147/596 (24%), Positives = 264/596 (44%), Gaps = 93/596 (15%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
NK + R G+L AR +FD++ + + W TM+ GY+++ ++++ + M +
Sbjct: 156 ANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECG 215
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ NE T+ +IL C +L GK+IH +++SG++ V + L+ Y C IE+A+
Sbjct: 216 QPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQL 275
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+FD++ E N + W++M+ G +AF +F++M ++ +
Sbjct: 276 IFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFI------------------ 317
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
PN YT+ S++ A A GA K VH + G D +G AL+
Sbjct: 318 ---------------PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALV 362
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA----------------- 303
Y + D A V+D + + + +I GL GR ++A
Sbjct: 363 HMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLT 422
Query: 304 --------------------ELIFNRLTEANSIS----YNSMIKGYAVYGQVDDSKRLFE 339
+++ EA IS N++I YA G +DD++ +F+
Sbjct: 423 TYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFD 482
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
M R +IS WN+M+ G QN +A +++ M++ + +
Sbjct: 483 GMCDRDVIS-----------------WNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDST 525
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T+ L + +L+ +H H V+T S+ VG++ + MY RCGSI+DA+ F +
Sbjct: 526 TYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKL 585
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
S +V W A++ G + G EA+ LF M + +P+A TF+ +LSA V +
Sbjct: 586 SVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVK 645
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ G+V L +V + G++ A++ DM +E + W ++
Sbjct: 646 EVHSHATDAGLVD-LRVGNALVHTYSKCGNVKYAKQVFDDM-VERNVTTWTMMIGG 699
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/551 (22%), Positives = 247/551 (44%), Gaps = 94/551 (17%)
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
++++++ + + ++ ++ IL C + ++ KQ+H ++KSG E +V + LL
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLL 160
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
Y C G +QC A VF K+ KK++ +WT
Sbjct: 161 RVYIRC--------------------------GRLQC-----ARQVFDKLLKKNIYIWTT 189
Query: 187 LISGYAKSVDGCEKALKLFRWMR-ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
+I GYA+ E A++++ MR E G+ PNE T+ S+++AC GK +H +I
Sbjct: 190 MIGGYAE-YGHAEDAMRVYDKMRQECGQ--PNEITYLSILKACCCPVNLKWGKKIHAHII 246
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
+ GF+ D + AL+ Y C + + A ++D++ + + +I GL GR ++A
Sbjct: 247 QSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFH 306
Query: 306 IFNRLTE----ANSISY-----------------------------------NSMIKGYA 326
+F ++ NS +Y N+++ YA
Sbjct: 307 LFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYA 366
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G +DD++ +F+ M R I S W MI G Q+ ++A L+
Sbjct: 367 KSGSIDDARVVFDGMTERDIFS-----------------WTVMIGGLAQHGRGQEAFSLF 409
Query: 387 MTMRKLAIDRTRSTFSVLFHAC--SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
+ M++ +T+ + +A + +L+ +++H H + F S++ +G +L+ MY+
Sbjct: 410 LQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYA 469
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+CGSI+DA+ F + +V +W A+M G + +G G EA +F M ++ +VP++ T++
Sbjct: 470 KCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLS 529
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
+L+ + ++ + G++ + + + R G + +A + +
Sbjct: 530 LLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVR- 588
Query: 565 DAVVWGALLSA 575
W A++
Sbjct: 589 HVTTWNAMIGG 599
>gi|334183275|ref|NP_175765.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806499|sp|Q9C8L6.2|PPR80_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g53600, mitochondrial; Flags: Precursor
gi|332194847|gb|AEE32968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 717
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 219/687 (31%), Positives = 345/687 (50%), Gaps = 51/687 (7%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK-------WAKF 65
T T I N I++ RNG L A +F QM R++VSW M+ Y++ W F
Sbjct: 45 TTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVF 104
Query: 66 DESLSLVSTMHRSNV------KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
DE V+T + + + K + + + N++ I V ++ E
Sbjct: 105 DEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAE 164
Query: 120 FV-------------GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
F+ + LL Y + EA RVF + + S M+ GY + +
Sbjct: 165 FLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRI 224
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
DA +F +M +++V+ WT +I GY K+ E LF MR+ G+ N T + +
Sbjct: 225 VDARSLFDRMTERNVITWTAMIDGYFKA-GFFEDGFGLFLRMRQEGDVKVNSNTLAVMFK 283
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
AC + EG +HGL+ + EFD +G +L+ Y A V+ ++N +
Sbjct: 284 ACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVS 343
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
NSLI GL+ +I +A +F ++ + +S+ MIKG++ G++ LF MP
Sbjct: 344 WNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMP---- 399
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
E++ +TW +MIS +V N +E+AL + M + + TFS +
Sbjct: 400 -------------EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLS 446
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
A + L L +G +H +VK +++ V SLV MY +CG+ NDA FS IS PN+ +
Sbjct: 447 ATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVS 506
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
+ +++GYS++G G +A+ LF ++ PN TF+ +LSACV G V+ G K F+SMK
Sbjct: 507 YNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMK 566
Query: 527 -SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
SY + P +HY C+VDLLGRSG L +A I MP + + VWG+LLSA + +++
Sbjct: 567 SSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLA 626
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGK---WGKKMDIRKRLTHLEVKKDPGCSWIEL 642
E AA+K+ L+ + YV+LS +Y+++GK + M+I+K +KKDPG SWI L
Sbjct: 627 ELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKK---SKRIKKDPGSSWIIL 683
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHL 669
VH F D + N I TL+ +
Sbjct: 684 KGEVHNFLAGDESQLNLEEIGFTLKMI 710
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 217/659 (32%), Positives = 344/659 (52%), Gaps = 64/659 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A NLFD+MP R VS+ T+ GY+ + + L S +HR +LN F++ L +
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVS 158
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L+ +H ++K GY+ FVG+ L+ Y+ C ++ A+ VF+
Sbjct: 159 LDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEG------------ 206
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ C KD+VVW ++S Y ++ E +LKL MR +G MP
Sbjct: 207 ----ILC---------------KDIVVWAGIVSCYVEN-GYFEDSLKLLSCMRMAG-FMP 245
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
N YTFD+ ++A LGAF K VHG ++K + D +G L++ Y A +V+
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVF 305
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAV----- 327
+ + + + +I G +A +F R+ EA N + +S++ G A+
Sbjct: 306 NEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG 365
Query: 328 -----YGQVDDSKRLFEKMPHRSIIS-------LNTMISVIPEME-RNPVTWNSMISGYV 374
+G V + ++I ++T + + E+ +N V+WN++I GY
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY- 424
Query: 375 QNNLHE--KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
NL E KA ++ + + T TFS AC+ L S+ G +H +KT
Sbjct: 425 -ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V V SL+DMY++CG I AQ+ F+ + + +VA+W AL++GYS HGLG +A+ + +IM +
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
+D PN TF+GVLS C AGL+++G + F SM + +G+ P LEHYTC+V LLGRSG L
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
+A + I+ +P E ++W A+LSA N E R+A+++ ++ K + YV++SN+YA
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYA 663
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
+W IRK + + VKK+PG SWIE VH FSV ++P+ +I LE L
Sbjct: 664 GAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLN 722
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/516 (22%), Positives = 221/516 (42%), Gaps = 60/516 (11%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
L+ + +L C Q N I K IHC +LK G C + + +L
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKG-SCLDLFATNIL--------------- 90
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
L YV+ DA ++F +MP+++ V + L GYA C+
Sbjct: 91 ---------------LNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA-----CQDP 130
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+ L+ + G + N + F S ++ L +H ++K G++ + +G ALI
Sbjct: 131 IGLYSRLHREGHEL-NPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALIN 189
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSIS 317
Y C + D A V++ + + +++ + G ED+ + + + A N+ +
Sbjct: 190 AYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYT 249
Query: 318 YNSMIKG----------YAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------VIPEME 360
+++ +K V+GQ+ + + + ++ L T + V EM
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
Query: 361 RNPVT-WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
+N V W+ MI+ + QN +A+ L++ MR+ + T S + + C+ G+
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
LH +VK F+ ++YV +L+D+Y++C ++ A F+ +SS N +W ++ GY + G
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
G +A +F L + TF L AC ++ G+++ +
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS 489
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++D+ + G + A+ +M +D W AL+S
Sbjct: 490 LIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISG 524
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 206/467 (44%), Gaps = 59/467 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + +AR +F+ + + +V W ++ Y + F++SL L+S M + N TF T L
Sbjct: 195 GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL 254
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
L + K +H +LK+ Y VG GLL Y ++ +A +VF+E+ +++ +
Sbjct: 255 KASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVV 314
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS M+ + Q ++A D+FI+M + VV
Sbjct: 315 PWSFMIARFCQNGFCNEAVDLFIRMREAFVV----------------------------- 345
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
PNE+T S++ CA G+ +HGL++K GF+ D + ALI+ Y CE D
Sbjct: 346 ----PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 272 AMRVYDRLENPCLNASNSLINGLISMG---------------RIEDAELIFNRLTEANSI 316
A++++ L + + N++I G ++G ++ E+ F+ A +
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA- 460
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------SVIPEMERNPV-TWNS 368
S SM G V+G + + S+I + SV EME V +WN+
Sbjct: 461 SLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNA 520
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT- 427
+ISGY + L +AL++ M+ TF + CS G + QGQ +++
Sbjct: 521 LISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDH 580
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG 473
E + T +V + R G ++ A I P+V W A+++
Sbjct: 581 GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 33/221 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I +N I + ++ TA LF ++ + VSWNT++ GY + ++ S+ R
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ V + E TFS+ L CA L S+ G Q+H L +K+ V + L+ YA C +I+
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VF+E M DV W LISGY+ G
Sbjct: 503 AQSVFNE-------------------------------METIDVASWNALISGYSTHGLG 531
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+AL++ M++ + PN TF V+ C+ G +G+
Sbjct: 532 -RQALRILDIMKDR-DCKPNGLTFLGVLSGCSNAGLIDQGQ 570
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 93/206 (45%), Gaps = 12/206 (5%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ +N I + G + A+++F++M V SWN ++ GYS ++L ++ M
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQ-IHCLVLKSGYE-CFEFVGSGLLFFYANCFEI 135
+ K N TF +LS C+ + G++ ++ G E C E + ++ ++
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHY-TCMVRLLGRSGQL 602
Query: 136 EEAKRVFDEL-HEDNELLWSLMLVGYVQCN---LMSDAFDVFIKMPKKDVVVWTKLISGY 191
++A ++ + + +E + ++W ML + N + + +K+ KD + + + Y
Sbjct: 603 DKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMY 662
Query: 192 AKS-----VDGCEKALKLFRWMRESG 212
A + V K++K +E G
Sbjct: 663 AGAKQWANVASIRKSMKEMGVKKEPG 688
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 214/640 (33%), Positives = 330/640 (51%), Gaps = 62/640 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS--NVKL--NET 85
++ ++ AR LFD MP R VSWN+M+ GYS+ +E+ L +M S N KL ++
Sbjct: 88 KHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDF 147
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T +T+L C L GK +H +K G++ FV ++ Y C ++ A FD++
Sbjct: 148 TLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQI 207
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
KD+V W +I+GYA++ E+A++LF
Sbjct: 208 E-------------------------------NKDIVAWNTMITGYAQNCYE-EEAIELF 235
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M G PN+ TF V++A + G+ H ++K G D + AL++ Y
Sbjct: 236 YQMELEGFK-PNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSK 294
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSM 321
+ R + + L + N+LI G MG+ E+A ++++L E +S ++ +
Sbjct: 295 FYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGL 354
Query: 322 IKGYAVYGQVDDSKRLFE---KMPHRSIISLNTMI-----------SVIPEMER----NP 363
+V V + ++ K S +S+ I S + E N
Sbjct: 355 FSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNS 414
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHA 422
V W +ISG+ QN EKAL + MRK ID+T + S + A S +++QG+ LHA
Sbjct: 415 VCWAGIISGFAQNGEGEKALMQFCKMRKF-IDKTDEFSSSSVIKAVSSWAAVEQGRHLHA 473
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
H++K+ + +YVG++++DMYS+CG + DAQ FS + NV +W +++ GY+ +G E
Sbjct: 474 HVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKE 533
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVV 541
A+LLF+ M I+P A TFVG+L AC AGLV EG + M +YG+ P++EH TC+V
Sbjct: 534 ALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMV 593
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
DLLGR+G+L EAE F+ + +WG+LLSAC N +VG RAAQ L+ S
Sbjct: 594 DLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSS 653
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
+Y LSNIYA W + IR + + V+K+PGCSWIE
Sbjct: 654 SYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWIE 693
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/549 (26%), Positives = 269/549 (48%), Gaps = 52/549 (9%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHC 108
VV W + + ++ D++LS M R+ ++ N T+S +S CAQ +HC
Sbjct: 6 VVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLHC 65
Query: 109 LVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD 168
L+LK G+ FV SGL+ Y+ I+EA+ +FD++ E +++ W+ M+ GY Q L +
Sbjct: 66 LILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEE 125
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A +F M ++ CE W + + +++T +V++AC
Sbjct: 126 ACGLFCSM------------------INSCEN------W-----KLLVSDFTLATVLKAC 156
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
LG GK VHG +K GF+ D + G+ + YC C D A +D++EN + A N
Sbjct: 157 GGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWN 216
Query: 289 SLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGY-----AVYGQVDDSKRL-- 337
++I G E+A +F ++ + N ++ ++K + G+ +K L
Sbjct: 217 TMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKL 276
Query: 338 ---FEKMPHRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQNNLHEKALQLY 386
+ +++ + + I ++E RN V++N++I+GY +E+AL++Y
Sbjct: 277 GCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVY 336
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
++ ++ TF LF +CS ++ +G +H H VK +S+V VG S+V+ YS+C
Sbjct: 337 SQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKC 396
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G + A +F SI+ PN W +++G++ +G G +A++ F M + + + V+
Sbjct: 397 GFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVI 456
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
A V +G + + G+ T+ + V+D+ + G + +A++ MP E +
Sbjct: 457 KAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP-EKNV 515
Query: 567 VVWGALLSA 575
V W ++++
Sbjct: 516 VSWNSMITG 524
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 221/491 (45%), Gaps = 70/491 (14%)
Query: 17 LIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
L VS + C + G L A FDQ+ + +V+WNTM+ GY++ +E++ L M
Sbjct: 181 LFVSGSTVYMYC-KCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQME 239
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
K N+TTF +L ++ G+ H VLK G FV + L+ Y+ ++IE
Sbjct: 240 LEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIE 299
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+ +R F E M K+++V + LI+GY+ +
Sbjct: 300 DVERAFGE-------------------------------MSKRNLVSFNALITGYSL-MG 327
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E+AL+++ ++ G P+ +TF + +C+ EG VH +K G + D S+G
Sbjct: 328 KYEEALRVYSQLQSEGME-PDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVG 386
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TE 312
+++ FY C D A+ ++ + P +I+G G E A + F ++ +
Sbjct: 387 NSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDK 446
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPH----------RSIISL----------NTM 352
+ S +S+IK + + V+ + L + ++I + +
Sbjct: 447 TDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKV 506
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
SV+P E+N V+WNSMI+GY QN ++AL L+ M I T TF + ACS G
Sbjct: 507 FSVMP--EKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAG 564
Query: 413 SLQQGQ-----LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS-FSSISSPNVAA 466
+++G+ ++H + + E T +VD+ R G + +A+A SS S
Sbjct: 565 LVEEGRNFYNLMVHNYGIPPSMEHC----TCMVDLLGRAGYLEEAEAFLLSSSFSKEPGI 620
Query: 467 WTALMNGYSHH 477
W +L++ H
Sbjct: 621 WGSLLSACGVH 631
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+E N V W S I+ + L ++AL ++ M + I+ T+S AC+
Sbjct: 2 LETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLAT 61
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
LH ++K F + ++V + L+ MYS+ I +A+ F + + +W +++ GYS G
Sbjct: 62 SLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRG 121
Query: 479 LGSEAVLLFEIMLEQ----DIVPNAATFVGVLSAC 509
L EA LF M+ ++ + T VL AC
Sbjct: 122 LNEEACGLFCSMINSCENWKLLVSDFTLATVLKAC 156
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
NV WT+ + + GL +A+ F ML I PNA T+ +SAC ++ + +
Sbjct: 5 NVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLH 64
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G L + ++ + + + EA DMP E D V W ++++
Sbjct: 65 CLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMP-ERDDVSWNSMIAG 116
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 192/640 (30%), Positives = 336/640 (52%), Gaps = 53/640 (8%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
+ +P T+ S+++++ +K F +S+ + S M + + + VCA+L++
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
GKQIHC+ SG + FV + Y C + +A++VFD + + + + S +L
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 160 YVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGEN 214
Y + + + + +M + ++V W ++SG+ +S G K A+ +F+ + G
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRS--GYHKEAVVMFQKIHHLG-F 248
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P++ T SV+ + G+++HG +IK G D+ + A+I+ Y
Sbjct: 249 CPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMY----------- 297
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
+ + G+IS+ FN+ + N+ I G + G VD +
Sbjct: 298 -----------GKSGHVYGIISL---------FNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+FE ++ ME N V+W S+I+G QN +AL+L+ M+ +
Sbjct: 338 LEMFELFKEQT-------------MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
T + AC + +L G+ H V+ NV+VG++L+DMY++CG IN +Q
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F+ + + N+ W +LMNG+S HG E + +FE ++ + P+ +F +LSAC + GL
Sbjct: 445 VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504
Query: 515 VNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+EG K F+ M + YG+ P LEHY+C+V+LLGR+G L EA + IK+MP E D+ VWGALL
Sbjct: 505 TDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
++C N+++ E AA+K+F L+ + YV+LSNIYA G W + IR ++ L +KK
Sbjct: 565 NSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKK 624
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+PGCSWI++ +RV+ D+++P + I ++ ++ +
Sbjct: 625 NPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEM 664
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 160/357 (44%), Gaps = 48/357 (13%)
Query: 28 CGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTF 87
CGR G AR +FD+M + VV+ + +LC Y++ +E + ++S M S ++ N ++
Sbjct: 164 CGRMGD---ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSW 220
Query: 88 STILS-----------------------------VCAQLNSLID------GKQIHCLVLK 112
+ ILS V + L S+ D G+ IH V+K
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK 280
Query: 113 SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
G + V S ++ Y + +F++ + + + G + L+ A ++
Sbjct: 281 QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 173 FIKMPKK----DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
F ++ +VV WT +I+G A++ E AL+LFR M+ +G PN T S++ AC
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIE-ALELFREMQVAGVK-PNHVTIPSMLPAC 398
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
+ A G+ HG ++ + +G ALI+ Y C + + V++ + L N
Sbjct: 399 GNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWN 458
Query: 289 SLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
SL+NG G+ ++ IF L + + IS+ S++ G D+ + F+ M
Sbjct: 459 SLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 151/349 (43%), Gaps = 57/349 (16%)
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL------ 294
H ++K G + D I LI Y F+ A V + +P + + +SLI L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 295 ----------ISMGRIEDAELIFNRLT-----------------------EANSISYNSM 321
S G I D+ ++ N + ++ SM
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIIS-------------LNTMISVIPEMER-----NP 363
Y G++ D++++F++M + +++ L ++ ++ EME N
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
V+WN ++SG+ ++ H++A+ ++ + L + T S + + L G+L+H +
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
++K + V ++++DMY + G + + F+ A + G S +GL +A
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
+ +FE+ EQ + N ++ +++ C + G E +++FR M+ GV P
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 17/227 (7%)
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
+I Y+ Y +D+ + + +P +I S ++S+I + L
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYS-----------------FSSLIYALTKAKLFT 98
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+++ ++ M + LF C+ L + + G+ +H + + + +V S+
Sbjct: 99 QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMF 158
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
MY RCG + DA+ F +S +V +AL+ Y+ G E V + M I N
Sbjct: 159 HMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIV 218
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
++ G+LS R+G E + +F+ + G P + V+ +G S
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDS 265
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 106/271 (39%), Gaps = 43/271 (15%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G++G + +LF+Q + N + G S+ D++L + ++LN +++
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 89 TILSVCAQ-----------------------------------LNSLIDGKQIHCLVLKS 113
+I++ CAQ + +L G+ H ++
Sbjct: 358 SIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 114 GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
VGS L+ YA C I ++ VF+ + N + W+ ++ G+ + +F
Sbjct: 418 HLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 174 IKMP----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+ K D + +T L+S + V ++ K F+ M E P + ++
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQ-VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLG 536
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
R G E + L+ + FE D + GAL+
Sbjct: 537 RAGKLQEA---YDLIKEMPFEPDSCVWGALL 564
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 73/195 (37%), Gaps = 46/195 (23%)
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA ++K+ +++ Y+ L+ YS NDA SI P + ++++L+ + L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSAC------------------------------- 509
++++ +F M ++P++ + C
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 510 ----VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL--LGRSGHLHEAEEFIKDMP-- 561
+R G + + K+F M VV TC L R G L E + +M
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVV------TCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 562 -IELDAVVWGALLSA 575
IE + V W +LS
Sbjct: 212 GIEANIVSWNGILSG 226
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 201/667 (30%), Positives = 332/667 (49%), Gaps = 57/667 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNETTFS 88
+ G L AR LFD+M R +SW T++ GY E+LSL S M + ++ S
Sbjct: 13 KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILS 72
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
L C S+ G+ +H +K+ + FVGS L+ Y +++E VF E+
Sbjct: 73 LALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLR 132
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N + W+ ++ G V+ +A F M W + + GC+
Sbjct: 133 NVVSWTAIIAGLVRAGYNKEALAYFSDM-------WIQKV--------GCDT-------- 169
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
YTF S ++ACA GA G+ +H +K GF + L Y C
Sbjct: 170 ----------YTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGK 219
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKG 324
D +R+++ + + + ++I + +G+ E+A F R+ E N ++ ++I G
Sbjct: 220 LDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISG 279
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTW 366
A G+++ ++L + R ++ ++ + I M R+ ++W
Sbjct: 280 CATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISW 339
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
++MISGY Q E+A MR+ F+ + C + L+QG+ LHAH++
Sbjct: 340 STMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLC 399
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
E N V ++L++MYS+CGSI +A F N+ +WTA++NGY+ HG EA+ L
Sbjct: 400 VGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDL 459
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLG 545
F+ + + + P++ TF+ VL+AC AGLV+ G F S+ K + + P+ +HY C++DLL
Sbjct: 460 FKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLC 519
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G L++AE I+ MP + D VVW LL AC +++ G+RAA+K+ LD ++
Sbjct: 520 RAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHIT 579
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
L+N+YA GKW + ++RK + V K+PG SWI+ RV AF DR++P IY
Sbjct: 580 LANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDV 639
Query: 666 LEHLTAN 672
L+ L +
Sbjct: 640 LDLLASQ 646
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 182/437 (41%), Gaps = 55/437 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N T + G+L LF+ M R VVSW T++ + + + ++ M ++V
Sbjct: 207 ANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDV 266
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
NE TF+ ++S CA L + G+Q+H V++ G V + ++ Y+ C++++ A
Sbjct: 267 SPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLAST 326
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF L + + WS M+ GY Q +AFD
Sbjct: 327 VFQGLSRRDIISWSTMISGYAQGGCGEEAFD----------------------------- 357
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
WMR G PNE+ F SV+ C + +GK +H ++ G E + + ALI
Sbjct: 358 ---YLSWMRREGPR-PNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALI 413
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSI 316
Y C + A +++D E + + ++ING G ++A +F +L + +S+
Sbjct: 414 NMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSV 473
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
++ +++ + G VD F SL+ + + P + + MI +
Sbjct: 474 TFIAVLAACSHAGLVDLGFHYFN--------SLSKVHQICPSKDH----YGCMIDLLCRA 521
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
A + +M R +S L AC G + G+ +++ + N V
Sbjct: 522 GRLNDAESMIQSM---PFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQ--LDPNCAVT 576
Query: 437 -TSLVDMYSRCGSINDA 452
+L +MY+ G +A
Sbjct: 577 HITLANMYAAKGKWKEA 593
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 144/312 (46%), Gaps = 34/312 (10%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N ++K G ++++++LF+KM ++R+ ++W ++ISGYV
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKM-----------------LQRDEISWTTIISGYVNGMN 47
Query: 379 HEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+AL L+ M + + S+ AC S+ G+ LH + VKT F ++V+VG+
Sbjct: 48 TTEALSLFSKMWVEPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGS 107
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+LVDMY + G +++ F + NV +WTA++ G G EA+ F M Q +
Sbjct: 108 ALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGC 167
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
+ TF L AC +G +N G +I G + + + G L
Sbjct: 168 DTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLF 227
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGE-----RAAQKMFGLDKKP--ISAYVILSNIY 610
+ M + D V W ++ + N+++G+ +A ++M D P + ++S
Sbjct: 228 ESMT-QRDVVSWTTIIMS-----NVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGC- 280
Query: 611 AVLGK--WGKKM 620
A LG+ WG+++
Sbjct: 281 ATLGRIEWGEQL 292
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES 68
Q M Q LI +K G + A +FD+ +VSW M+ GY++ E+
Sbjct: 404 QNTMVQSALINMYSKC-------GSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEA 456
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQ 96
+ L + + ++ + TF +L+ C+
Sbjct: 457 IDLFKKLPKVGLRPDSVTFIAVLAACSH 484
>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01030, mitochondrial; Flags: Precursor
gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 202/674 (29%), Positives = 354/674 (52%), Gaps = 26/674 (3%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES 68
+ L +T +VS + GR L A LFD+MP R ++WN ++ + ++++
Sbjct: 16 RGLDNSDTRVVSASMGFY--GRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKA 73
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
+ L M S K ++T +L VC+ +G+QIH VL+ G E + + L+
Sbjct: 74 VELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVM 133
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVW 184
Y+ ++E +++VF+ + + N W+ +L Y + + DA + +M K D+V W
Sbjct: 134 YSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTW 193
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
L+SGYA S + A+ + + M+ +G P+ + S+++A A G GK +HG +
Sbjct: 194 NSLLSGYA-SKGLSKDAIAVLKRMQIAGLK-PSTSSISSLLQAVAEPGHLKLGKAIHGYI 251
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
++ +D + LI+ Y A V+D ++ + A NSL++GL ++DAE
Sbjct: 252 LRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAE 311
Query: 305 LIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
+ R+ + ++I++NS+ GYA G+ + + + KM + +
Sbjct: 312 ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP------------ 359
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
N V+W ++ SG +N AL++++ M++ + +T S L CL L G+ +
Sbjct: 360 -NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H ++ + YV T+LVDMY + G + A F I + ++A+W ++ GY+ G G
Sbjct: 419 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 478
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTC 539
E + F +MLE + P+A TF VLS C +GLV EG K F M+S YG++PT+EH +C
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
+VDLLGRSG+L EA +FI+ M ++ DA +WGA LS+C ++E+ E A +++ L+
Sbjct: 539 MVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHN 598
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNC 659
+ Y+++ N+Y+ L +W IR + + V+ SWI+++ VH F E + +P+
Sbjct: 599 SANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDE 658
Query: 660 NVIYATLEHLTANL 673
IY L L + +
Sbjct: 659 GDIYFELYKLVSEM 672
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 211/663 (31%), Positives = 342/663 (51%), Gaps = 64/663 (9%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ L A+ +FD MP R VVSW +++ GYS+ + +L M +S V ++ TF
Sbjct: 109 GKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFG 168
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+I+ C+ L + G+Q+H VLKS + + L+ Y
Sbjct: 169 SIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMY------------------- 209
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRW 207
+ NL+ DA DVF +M +D++ W +I+G+++ G E +AL F+
Sbjct: 210 ------------TKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL--GYELEALCYFKE 255
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M G +PNE+ F SV AC+ L G+ +HG+ IK G D G +L + Y C
Sbjct: 256 MLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCG 315
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI----------- 316
A V+ ++ P L A N++I G G ++A F+++ I
Sbjct: 316 LLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLC 375
Query: 317 ---SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS-------LNTMISVIPEMERNP--V 364
S + + +G V+G ++ + ++++ L I EM N V
Sbjct: 376 ACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLV 435
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACSCLGSLQQGQLLH 421
+WN++++ ++ H++A +++ ++ + I + R T + + A + S++ G +H
Sbjct: 436 SWNAILTACMR---HDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVH 492
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
+ +KT + V L+D+Y++CGS+ A F S+ +P+V +W++L+ GY+ G G
Sbjct: 493 CYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGE 552
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCV 540
EA+ LF+ M D+ PN TFVGVL+AC GLV EG K++ +M K +G+ PT EH +C+
Sbjct: 553 EALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCM 612
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
VDLL R+G L+EAE FI M + D VVW LL+AC N++VG+RAA+ + +D
Sbjct: 613 VDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNS 672
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
+A+V+L NIYA G W +R + V+K PG SWIE+ R+H F VED +P N
Sbjct: 673 AAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERN 732
Query: 661 VIY 663
IY
Sbjct: 733 KIY 735
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 141/565 (24%), Positives = 243/565 (43%), Gaps = 114/565 (20%)
Query: 46 IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-SNVKLNETTFSTILSVCAQLNSLIDGK 104
+R S N + K F+E++ + + + L +T++ ++S C+ L SL GK
Sbjct: 24 LRAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGK 83
Query: 105 QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
+IH +LKS + H D L + +L Y +C
Sbjct: 84 KIHDHMLKS------------------------------KSHPD-LTLQNHILNMYGKCK 112
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
+ DA VF MP+++VV WT +I+GY+++ G AL+ + M +SG MP+++TF S+
Sbjct: 113 SLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQG-GNALEFYFQMLQSGV-MPDQFTFGSI 170
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
I+AC+ LG G+ +H ++K F G +I
Sbjct: 171 IKACSSLGDIGLGRQLHAHVLKSEF------GAHII------------------------ 200
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
A N+LI+ I DA +F+R+ + IS+ SMI G++ G ++ F++M H+
Sbjct: 201 -AQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQ 259
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+ N I F +
Sbjct: 260 GVYLPNEFI-----------------------------------------------FGSV 272
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
F ACS L + G+ LH +K +V+ G SL DMY++CG ++ A+ F I P++
Sbjct: 273 FSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDL 332
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
AW A++ G+++ G EA+ F M Q ++P+ T +L AC + +GM++
Sbjct: 333 VAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGY 392
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
+ G+ + ++ + + L +A F ++M D V W A+L+AC E
Sbjct: 393 INKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEE 452
Query: 585 GERAAQKMFGLDKKPISAYVILSNI 609
R + M +P Y+ L+N+
Sbjct: 453 VFRLLKLMCISQHRP--DYITLTNV 475
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 215/494 (43%), Gaps = 73/494 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I++ N I+ ++ ++ A ++F +M R ++SW +M+ G+S+ E+L M
Sbjct: 199 IIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLH 258
Query: 78 SNVKL-NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
V L NE F ++ S C+ L G+Q+H + +K G F G L YA C
Sbjct: 259 QGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKC---- 314
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
G + C A VF ++ + D+V W +I+G+A D
Sbjct: 315 ----------------------GLLSC-----ARVVFYQIGRPDLVAWNAIIAGFAYGGD 347
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
++A+ F MR G +P+E T S++ AC +G VHG + K G + D +
Sbjct: 348 A-KEAIAFFSQMRHQGL-IPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVC 405
Query: 257 GALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRL----- 310
L+ Y C A+ ++ + N L + N+++ + R + AE +F L
Sbjct: 406 NTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACM---RHDQAEEVFRLLKLMCI 462
Query: 311 -----------------TEANSISYNSMIKGYAVYGQVDDSKRLFEKMP--HRSIISLNT 351
E SI + + YA+ ++ + + + SL T
Sbjct: 463 SQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKT 522
Query: 352 MISVIPEMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
+ M NP V+W+S+I GY Q E+AL+L+ TMR+L + TF + ACS
Sbjct: 523 AHKIFDSM-INPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACS 581
Query: 410 CLGSLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNV 464
+G +++G L+ + K P + + +VD+ +R G +N+A+ ++ P++
Sbjct: 582 HVGLVEEGWKLYGTMEKEFGIAPTREHC---SCMVDLLARAGCLNEAEGFIHQMAFDPDI 638
Query: 465 AAWTALMNGYSHHG 478
W L+ HG
Sbjct: 639 VVWKTLLAACKTHG 652
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 143/346 (41%), Gaps = 69/346 (19%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N +T + +L A F++M +VSWN +L + + +E L+ M S
Sbjct: 406 NTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQH 465
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ + T + +L A+ S+ G Q+HC LK+G C V +GL+ YA C ++ A +
Sbjct: 466 RPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHK 525
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+FD + + + WS +++GY Q GY E+
Sbjct: 526 IFDSMINPDVVSWSSLILGYAQ--------------------------FGYG------EE 553
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
ALKLF+ MR + PN TF V+ AC+ +G EG ++G + ++ G A
Sbjct: 554 ALKLFKTMRRL-DVKPNHVTFVGVLTACSHVGLVEEGWKLYGTM-------EKEFGIAPT 605
Query: 261 EFYCGC--------------------EAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
+C C AFD + V+ L C N + +G+
Sbjct: 606 REHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGN------VDVGK- 658
Query: 301 EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
AE I ++ +NS ++ + YA G +D RL M R +
Sbjct: 659 RAAENIL-KIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGV 703
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/590 (33%), Positives = 319/590 (54%), Gaps = 51/590 (8%)
Query: 102 DGKQIHCLVLKSGYECFEFVGSGLLFFYAN--CFEIEEAKRVFDELHEDNELLWSLMLVG 159
+ Q+H L +K+ V S LL YA+ ++ A +FD + E + W+L++
Sbjct: 30 EANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKC 89
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y++ +DA +F KL+ + +P+ +
Sbjct: 90 YIENQRSNDAIALF-----------CKLLCDF-----------------------VPDSF 115
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T V++ CARLGA EGK +HGL++K GF D+ + +L+ Y C + +V+DR+
Sbjct: 116 TLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRM 175
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFE 339
E+ + + NSLI+G G IE A +F + E +S S+ +I G + G+++ ++ +F+
Sbjct: 176 EDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFD 235
Query: 340 KMPHRSIISLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQL 385
+MP R+ +S N MI+ + +M ER+ VTWNSMI+GY +N KAL+L
Sbjct: 236 RMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKL 295
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ M + I +T A S + SL G+ +H+++VK+ F+++ +GT L++MYS+
Sbjct: 296 FEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSK 355
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CGS+ A F SI + WT+++ G HGL + + LF+ M + P+A TF+GV
Sbjct: 356 CGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGV 415
Query: 506 LSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
L+AC AG + + F+ M YG+ P++EHY C++D+L R+GHL EA++ I+ MPI+
Sbjct: 416 LNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKA 475
Query: 565 DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRK 624
+ V+W +LLS N+ +GE AAQ + L YVILSN+YA G W K +R+
Sbjct: 476 NKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVRE 535
Query: 625 RLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+ +KKDPGCS IE +H F V D+++P IY L + LN
Sbjct: 536 MMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLN 585
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 125/511 (24%), Positives = 226/511 (44%), Gaps = 83/511 (16%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+L+A +T + S A+ R L A +LFD + T+VSWN ++ Y +
Sbjct: 33 QLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIE 92
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
+ +++++L + V + T +L CA+L +L +GKQIH LVLK G+ +FV
Sbjct: 93 NQRSNDAIALFCKLLCDFVP-DSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFV 151
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
S L+ Y+ C EIE ++VFD + + + + W+ ++ GY +C + A ++F +MP+KD
Sbjct: 152 LSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDS 211
Query: 182 VVWTKLISGYAKS------------------------VDGCEK------ALKLFRWMRE- 210
WT LI G +KS ++G K A +LF M E
Sbjct: 212 FSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPER 271
Query: 211 ---------SGENMPNEYT-----FDSVIR---------------ACARLGAFCEGKVVH 241
+G ++T F+ ++R A + + + G+ VH
Sbjct: 272 SLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVH 331
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
++K GF+ D +G LIE Y C + A+RV+ + L S+I GL G +E
Sbjct: 332 SYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVE 391
Query: 302 DAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
+F+ + + ++I++ ++ + G +D+ R F+ M + + P
Sbjct: 392 QTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYD--------YGIKP 443
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
+E + +I + E+A T+ ++ I + ++ L G+++ G
Sbjct: 444 SIEH----YGCLIDVLCRAGHLEEAKD---TIERMPIKANKVIWTSLLSGSRKHGNIRMG 496
Query: 418 QLLHAHLVK-TPFESNVYVGTSLVDMYSRCG 447
+ HL+ P + YV L +MY+ G
Sbjct: 497 EYAAQHLIDLAPDTTGCYV--ILSNMYAAAG 525
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 217/658 (32%), Positives = 335/658 (50%), Gaps = 62/658 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A NLFD+MP R VS+ T+ GY+ + + L S +HR +LN F++ L +
Sbjct: 103 ALNLFDEMPERNNVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVS 158
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L+ +H ++K GY+ FVG+ L+ Y+ C ++ A+ VF+
Sbjct: 159 LDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEG------------ 206
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENM 215
+ C KD+VVW ++S Y + +GC E +L+L M G M
Sbjct: 207 ----ILC---------------KDIVVWAGIVSCYVE--NGCFEDSLQLLSRMGMDGF-M 244
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN YTFD+ ++A LGAF K VHG ++K +E D +G L++ Y A +V
Sbjct: 245 PNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAV---- 327
++ + + + +I G A IF R+ E N + +S++ G A+
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCS 364
Query: 328 ------YGQVDDSKRLFEKMPHRSIIS-------LNTMISVIPEME-RNPVTWNSMISGY 373
+G V + ++I ++T + + E+ +N V+WN++I GY
Sbjct: 365 GLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGY 424
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
KAL ++ + + T TFS AC+ L S++ G +H +KT V
Sbjct: 425 ENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRV 484
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
V SL+DMY++CG I AQ F+ + + +VA+W AL++GYS HGLG +A+ +F+IM
Sbjct: 485 AVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGS 544
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHE 552
D PN TF+GVLS C AGL+++G F SM +G+ P LEHYTC+V L GRSG L +
Sbjct: 545 DCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDK 604
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A I+ +P E ++W A+LSA N E R+A+++ ++ K + YV+LSN+YA
Sbjct: 605 AMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAG 664
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
+W IRK + VKK+PG SWIE VH FSV ++P+ +I LE L
Sbjct: 665 AKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLN 722
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 213/470 (45%), Gaps = 65/470 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + +AR++F+ + + +V W ++ Y + F++SL L+S M N TF T L
Sbjct: 195 GSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTAL 254
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
L + K +H +LK+ YE VG GLL Y ++ +A +VF+E+ +++ +
Sbjct: 255 KASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVV 314
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS M+ + Q + A D+FI+M + VV
Sbjct: 315 PWSFMIARFCQNGFCNKAVDIFIRMREGFVV----------------------------- 345
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
PNE+T S++ CA G+ +HGL++K GF+ D + ALI+ Y CE D
Sbjct: 346 ----PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDT 401
Query: 272 AMRVYDRLENPCLNASNSLINGLISMG---------------RIEDAELIFNRLTEANSI 316
A++++ L + + + N++I G ++G ++ E+ F+ A +
Sbjct: 402 AVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACA- 460
Query: 317 SYNSMIKGYAVYG---QVDDSKRLFEKMPHRSIISL-------NTMISVIPEMERNPV-T 365
S SM G V+G + +++KR+ S+I + +V EME V +
Sbjct: 461 SLASMELGVQVHGLAIKTNNAKRV---AVSNSLIDMYAKCGDIKVAQTVFNEMETIDVAS 517
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ-LLHAHL 424
WN++ISGY + L +AL+++ M+ TF + CS G + QGQ + +
Sbjct: 518 WNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMI 577
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG 473
E + T +V ++ R G ++ A I P+V W A+++
Sbjct: 578 CDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSA 627
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I + ++ TA LF ++ + VVSWNT++ GY + ++L++ R+ V
Sbjct: 386 SNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQV 445
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ E TFS+ L CA L S+ G Q+H L +K+ V + L+ YA C +I+ A+
Sbjct: 446 SVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQT 505
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
VF+E+ + W+ ++ GY L A +F M D
Sbjct: 506 VFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSD 545
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 112/258 (43%), Gaps = 26/258 (10%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N ++ Y G D+ LF++MP ERN V++ ++ GY
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMP-----------------ERNNVSYVTLTQGYAC--- 127
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+ + LY + + + F+ L + LH+ +VK ++SN +VG +
Sbjct: 128 -QDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAA 186
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L++ YS CGS++ A++ F I ++ W +++ Y +G +++ L M +PN
Sbjct: 187 LINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPN 246
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSM--KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
TF L A + G + + + Y + P + ++ L + G + +A +
Sbjct: 247 NYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVG--VGLLQLYTQLGDMSDAFKV 304
Query: 557 IKDMPIELDAVVWGALLS 574
+MP + D V W +++
Sbjct: 305 FNEMP-KNDVVPWSFMIA 321
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ +N I + G + A+ +F++M V SWN ++ GYS ++L + M
Sbjct: 484 VAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKG 543
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQ--IHCLVLKSGYE-CFEFVGSGLLFFYANCFE 134
S+ K N TF +LS C+ LID Q ++ G E C E + ++ + +
Sbjct: 544 SDCKPNGLTFLGVLSGCSNA-GLIDQGQDCFESMICDHGIEPCLEHY-TCMVRLFGRSGQ 601
Query: 135 IEEAKRVFDEL-HEDNELLWSLML 157
+++A + + + +E + ++W ML
Sbjct: 602 LDKAMNLIEGIPYEPSVMIWRAML 625
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/640 (30%), Positives = 336/640 (52%), Gaps = 53/640 (8%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
+ +P T+ S+++++ +K F +S+ + S M + + + VCA+L++
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
GKQIHC+ SG + FV + Y C + +A++VFD + + + + S +L
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 160 YVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGEN 214
Y + + + + +M + ++V W ++SG+ +S G K A+ +F+ + G
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRS--GYHKEAVVMFQKIHHLG-F 248
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P++ T SV+ + G+++HG +IK G D+ + A+I+ Y
Sbjct: 249 CPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMY----------- 297
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
+ + G+IS+ FN+ + N+ I G + G VD +
Sbjct: 298 -----------GKSGHVYGIISL---------FNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+FE ++ ME N V+W S+I+G QN +AL+L+ M+ +
Sbjct: 338 LEMFELFKEQT-------------MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
T + AC + +L G+ H V+ NV+VG++L+DMY++CG IN +Q
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F+ + + N+ W +LMNG+S HG E + +FE ++ + P+ +F +LSAC + GL
Sbjct: 445 VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504
Query: 515 VNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+EG K F+ M + YG+ P LEHY+C+V+LLGR+G L EA + IK+MP E D+ VWGALL
Sbjct: 505 TDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
++C N+++ E AA+K+F L+ + YV+LSNIYA G W + IR ++ L +KK
Sbjct: 565 NSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKK 624
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+PGCSWI++ +RV+ D+++P + I ++ ++ +
Sbjct: 625 NPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEM 664
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 160/358 (44%), Gaps = 48/358 (13%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
CGR G AR +FD+M + VV+ + +LC Y++ +E + ++S M S ++ N +
Sbjct: 163 RCGRMGD---ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVS 219
Query: 87 FSTILS-----------------------------VCAQLNSLID------GKQIHCLVL 111
++ ILS V + L S+ D G+ IH V+
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
K G + V S ++ Y + +F++ + + + G + L+ A +
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALE 339
Query: 172 VFIKMPKK----DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
+F ++ +VV WT +I+G A++ E AL+LFR M+ +G PN T S++ A
Sbjct: 340 MFELFKEQTMELNVVSWTSIIAGCAQNGKDIE-ALELFREMQVAGVK-PNHVTIPSMLPA 397
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
C + A G+ HG ++ + +G ALI+ Y C + + V++ + L
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 288 NSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
NSL+NG G+ ++ IF L + + IS+ S++ G D+ + F+ M
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 151/349 (43%), Gaps = 57/349 (16%)
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL------ 294
H ++K G + D I LI Y F+ A V + +P + + +SLI L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 295 ----------ISMGRIEDAELIFNRLT-----------------------EANSISYNSM 321
S G I D+ ++ N + ++ SM
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIIS-------------LNTMISVIPEMER-----NP 363
Y G++ D++++F++M + +++ L ++ ++ EME N
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
V+WN ++SG+ ++ H++A+ ++ + L + T S + + L G+L+H +
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
++K + V ++++DMY + G + + F+ A + G S +GL +A
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
+ +FE+ EQ + N ++ +++ C + G E +++FR M+ GV P
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 17/227 (7%)
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
+I Y+ Y +D+ + + +P +I S ++S+I + L
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYS-----------------FSSLIYALTKAKLFT 98
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+++ ++ M + LF C+ L + + G+ +H + + + +V S+
Sbjct: 99 QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMF 158
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
MY RCG + DA+ F +S +V +AL+ Y+ G E V + M I N
Sbjct: 159 HMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIV 218
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
++ G+LS R+G E + +F+ + G P + V+ +G S
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDS 265
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 106/271 (39%), Gaps = 43/271 (15%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G++G + +LF+Q + N + G S+ D++L + ++LN +++
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 89 TILSVCAQ-----------------------------------LNSLIDGKQIHCLVLKS 113
+I++ CAQ + +L G+ H ++
Sbjct: 358 SIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 114 GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
VGS L+ YA C I ++ VF+ + N + W+ ++ G+ + +F
Sbjct: 418 HLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 174 IKMP----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+ K D + +T L+S + V ++ K F+ M E P + ++
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQ-VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLG 536
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
R G E + L+ + FE D + GAL+
Sbjct: 537 RAGKLQEA---YDLIKEMPFEPDSCVWGALL 564
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 73/195 (37%), Gaps = 46/195 (23%)
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA ++K+ +++ Y+ L+ YS NDA SI P + ++++L+ + L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSAC------------------------------- 509
++++ +F M ++P++ + C
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 510 ----VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL--LGRSGHLHEAEEFIKDMP-- 561
+R G + + K+F M VV TC L R G L E + +M
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVV------TCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 562 -IELDAVVWGALLSA 575
IE + V W +LS
Sbjct: 212 GIEANIVSWNGILSG 226
>gi|12324033|gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana]
Length = 839
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 217/680 (31%), Positives = 341/680 (50%), Gaps = 51/680 (7%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK-------WAKF 65
T T I N I++ RNG L A +F QM R++VSW M+ Y++ W F
Sbjct: 45 TTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVF 104
Query: 66 DESLSLVSTMHRSNV------KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
DE V+T + + + K + + + N++ I V ++ E
Sbjct: 105 DEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAE 164
Query: 120 FV-------------GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
F+ + LL Y + EA RVF + + S M+ GY + +
Sbjct: 165 FLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRI 224
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
DA +F +M +++V+ WT +I GY K+ E LF MR+ G+ N T + +
Sbjct: 225 VDARSLFDRMTERNVITWTAMIDGYFKA-GFFEDGFGLFLRMRQEGDVKVNSNTLAVMFK 283
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
AC + EG +HGL+ + EFD +G +L+ Y A V+ ++N +
Sbjct: 284 ACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVS 343
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
NSLI GL+ +I +A +F ++ + +S+ MIKG++ G++ LF MP
Sbjct: 344 WNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMP---- 399
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
E++ +TW +MIS +V N +E+AL + M + + TFS +
Sbjct: 400 -------------EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLS 446
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
A + L L +G +H +VK +++ V SLV MY +CG+ NDA FS IS PN+ +
Sbjct: 447 ATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVS 506
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
+ +++GYS++G G +A+ LF ++ PN TF+ +LSACV G V+ G K F+SMK
Sbjct: 507 YNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMK 566
Query: 527 -SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
SY + P +HY C+VDLLGRSG L +A I MP + + VWG+LLSA + +++
Sbjct: 567 SSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLA 626
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGK---WGKKMDIRKRLTHLEVKKDPGCSWIEL 642
E AA+K+ L+ + YV+LS +Y+++GK + M+I+K +KKDPG SWI L
Sbjct: 627 ELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKK---SKRIKKDPGSSWIIL 683
Query: 643 NSRVHAFSVEDRNNPNCNVI 662
VH F D + N I
Sbjct: 684 KGEVHNFLAGDESQLNLEEI 703
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 209/650 (32%), Positives = 335/650 (51%), Gaps = 64/650 (9%)
Query: 52 WNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLV 110
WN ++ +K F E L + + H +K + T+ ++L C+ L + GK +H V
Sbjct: 265 WNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHV 324
Query: 111 LKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAF 170
+KSG+ V S + YA +CN+ DA
Sbjct: 325 IKSGFAMDVVVMSSAVGMYA-------------------------------KCNVFEDAI 353
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+F +MP++DV W +IS Y + DG EKAL+LF M+ SG P+ T +VI +CA
Sbjct: 354 KLFDEMPERDVASWNNVISCYYQ--DGQPEKALELFEEMKVSGFK-PDSVTLTTVISSCA 410
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
RL GK +H L++ GF D + AL++ Y C + A V+++++ + + NS
Sbjct: 411 RLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNS 470
Query: 290 LINGL---------ISMGRIEDAELIFNRLTEANSI----------SYNSMIKGYAVYGQ 330
+I G I + R D E I LT +SI I GY + +
Sbjct: 471 MIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNR 530
Query: 331 VD-----DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
V+ +S + +I S + +P+ N V+WN MISGYV+ + +AL +
Sbjct: 531 VEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKT--NVVSWNVMISGYVKVGSYLEALVI 588
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ MRK + TF+ + ACS L L++G+ +H ++++ E N V +L+DMY++
Sbjct: 589 FTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAK 648
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CG++++A F+ + + +WT+++ Y HG EA+ LFE M + D P+ TF+ +
Sbjct: 649 CGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAI 708
Query: 506 LSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP-IE 563
LSAC AGLV+EG F M YG P +EHY+C++DLLGR G L EA E ++ P I
Sbjct: 709 LSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIR 768
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
D + L SAC +++GE+ + + D S Y+ILSN+YA + KW + +R
Sbjct: 769 EDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVR 828
Query: 624 KRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
++ L +KK+PGCSWIE+ R+H F VED+++P ++IY + L +++
Sbjct: 829 LKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHV 878
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 205/439 (46%), Gaps = 56/439 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A LFD+MP R V SWN ++ Y + + +++L L M S K + T +T++S CA+
Sbjct: 352 AIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCAR 411
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L L GK+IH +++SG+ FV S L+ Y C +E AK VF+++ N + W+ M
Sbjct: 412 LLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSM 471
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ GY + G +KS ++LFR M E G P
Sbjct: 472 IAGYS--------------------------LKGDSKS------CIELFRRMDEEGIR-P 498
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
T S++ AC+R GK +HG +I+ E D + +LI+ Y C A V+
Sbjct: 499 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 558
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMI---------- 322
+ + + N +I+G + +G +A +IF + +A ++I++ S++
Sbjct: 559 QNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLE 618
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------ERNPVTWNSMISGYV 374
KG ++ + +SK ++ +++ + + E ER+ V+W SMI+ Y
Sbjct: 619 KGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYG 678
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNV 433
+ +AL+L+ M++ + TF + ACS G + +G + + + F+ V
Sbjct: 679 SHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAV 738
Query: 434 YVGTSLVDMYSRCGSINDA 452
+ L+D+ R G + +A
Sbjct: 739 EHYSCLIDLLGRVGRLREA 757
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 64/313 (20%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L A+ +F+Q+ + VVSWN+M+ GYS + L M ++ TT S
Sbjct: 445 GKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLS 504
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+IL C++ +L GK IH ++++ E FV S L+ Y C I A+ VF + +
Sbjct: 505 SILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKT 564
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N + W++M+ GYV+ V +AL +F M
Sbjct: 565 NVVSWNVMISGYVK--------------------------------VGSYLEALVIFTDM 592
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
R++G P+ TF SV+ AC++L +GK +H +I+ E +E + GAL++ Y C A
Sbjct: 593 RKAGVK-PDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGA 651
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
D A+ IFN+L E + +S+ SMI Y +
Sbjct: 652 VDEALH-------------------------------IFNQLPERDFVSWTSMIAAYGSH 680
Query: 329 GQVDDSKRLFEKM 341
GQ ++ +LFEKM
Sbjct: 681 GQAFEALKLFEKM 693
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 105/211 (49%), Gaps = 36/211 (17%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
+CG G +A N+F MP VVSWN M+ GY K + E+L + + M ++ VK + T
Sbjct: 547 KCGNIG---SAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAIT 603
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
F+++L C+QL L GK+IH +++S E E V LL YA C ++EA +F++L
Sbjct: 604 FTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP 663
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
E + + W+ M+ Y AF+ ALKLF
Sbjct: 664 ERDFVSWTSMIAAY---GSHGQAFE-----------------------------ALKLFE 691
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEG 237
M++S + P++ TF +++ AC+ G EG
Sbjct: 692 KMQQS-DAKPDKVTFLAILSACSHAGLVDEG 721
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 106/234 (45%), Gaps = 11/234 (4%)
Query: 349 LNTMISVIPEMERNPVTWNSMISG--YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
L + ++I EM + +S+I+ ++ N L+ + R LA +R + +
Sbjct: 149 LEELDAIITEMSLLKLDLHSIINELEFIDNELNHYTEGEGIWYRVLARNRCLARVT---- 204
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVA 465
A S L L G+L+H +V ++N+ + SL+++Y C A+ F +I +P ++
Sbjct: 205 AGSALEELL-GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDIT 263
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLE-QDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
W LM + + + E + +F +L + P+A T+ VL AC G V G +
Sbjct: 264 LWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTH 323
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
+ G + + V + + +A + +MP E D W ++S C++
Sbjct: 324 VIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMP-ERDVASWNNVIS-CYY 375
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 207/642 (32%), Positives = 333/642 (51%), Gaps = 84/642 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-VKLNETTFSTI 90
G+L +AR +FD+M R VVSW +M+CGY++ +++ L M R V N T +
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
+S CA+L L G++++ + SG E + + S L+ Y C I+ AKR+FDE N
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
L + M YV+ L +AL +F M +
Sbjct: 303 DLCNAMASNYVRQGLT--------------------------------REALGVFNLMMD 330
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
SG P+ + S I +C++L GK HG +++ GFE ++I ALI+ Y C D
Sbjct: 331 SGVR-PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
A R IF+R++ +++NS++ GY G+
Sbjct: 390 TAFR-------------------------------IFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
VD + FE MP E+N V+WN++ISG VQ +L E+A++++ +M+
Sbjct: 419 VDAAWETFETMP-----------------EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 391 -KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+ ++ T + AC LG+L + ++ ++ K + +V +GT+LVDM+SRCG
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
A + F+S+++ +V+AWTA + + G A+ LF+ M+EQ + P+ FVG L+AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 510 VRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
GLV +G +IF SM K +GV P HY C+VDLLGR+G L EA + I+DMP+E + V+
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W +LL+AC N+E+ AA+K+ L + +YV+LSN+YA G+W +R +
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
++K PG S I++ + H F+ D ++P I A L+ ++
Sbjct: 702 KGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 175/368 (47%), Gaps = 29/368 (7%)
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
++ LI GYA S C +A+ LF M SG + P++YTF + ACA+ A G +HG
Sbjct: 101 MYNSLIRGYASS-GLCNEAILLFLRMMNSGIS-PDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
L++K G+ D + +L+ FY C D A +V+D + + + S+I G +D
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 303 AELIFNRLTEANSISYNSM-----IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
A +F R+ ++ NS+ I A ++ ++++ + + I + M+S +
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 358 EM------------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+M N N+M S YV+ L +AL ++ M + R
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+ +CS L ++ G+ H ++++ FES + +L+DMY +C + A F +
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
S+ V W +++ GY +G A FE M E++IV ++ ++S V+ L E +
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV----SWNTIISGLVQGSLFEEAI 454
Query: 520 KIFRSMKS 527
++F SM+S
Sbjct: 455 EVFCSMQS 462
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
+NS+I GY + L +A+ L++ M I + TF AC+ + G +H +V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV- 484
K + +++V SLV Y+ CG ++ A+ F +S NV +WT+++ GY+ +AV
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
L F ++ ++++ PN+ T V V+SAC + + G K++ +++ G+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 144/340 (42%), Gaps = 70/340 (20%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M+ +T +V+ N + NG++ A F+ MP + +VSWNT++ G + + F+E++ +
Sbjct: 398 MSNKT-VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 72 VSTMH-RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
+M + V + T +I S C L +L K I+ + K+G + +G+ L+ ++
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
C + E A +F+ L +DV WT I
Sbjct: 517 RCGDPESAMSIFNSL-------------------------------TNRDVSAWTAAIGA 545
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
A + + E+A++LF M E G P+ F + AC+ G +GK + ++K
Sbjct: 546 MAMAGNA-ERAIELFDDMIEQGLK-PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH-- 601
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNR 309
G + + + GC +++ L G +E+A +LI +
Sbjct: 602 -----GVSPEDVHYGC-----------------------MVDLLGRAGLLEEAVQLIEDM 633
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKM----PHRS 345
E N + +NS++ V G V+ + EK+ P R+
Sbjct: 634 PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERT 673
>gi|8671867|gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
gb|AF151215 and contains multiple PPR PF|01535 repeats
[Arabidopsis thaliana]
Length = 816
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 216/676 (31%), Positives = 340/676 (50%), Gaps = 51/676 (7%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK-------WAKF 65
T T I N I++ RNG L A +F QM R++VSW M+ Y++ W F
Sbjct: 45 TTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVF 104
Query: 66 DESLSLVSTMHRSNV------KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
DE V+T + + + K + + + N++ I V ++ E
Sbjct: 105 DEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAE 164
Query: 120 FV-------------GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
F+ + LL Y + EA RVF + + S M+ GY + +
Sbjct: 165 FLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRI 224
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
DA +F +M +++V+ WT +I GY K+ E LF MR+ G+ N T + +
Sbjct: 225 VDARSLFDRMTERNVITWTAMIDGYFKA-GFFEDGFGLFLRMRQEGDVKVNSNTLAVMFK 283
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
AC + EG +HGL+ + EFD +G +L+ Y A V+ ++N +
Sbjct: 284 ACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVS 343
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
NSLI GL+ +I +A +F ++ + +S+ MIKG++ G++ LF MP
Sbjct: 344 WNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMP---- 399
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
E++ +TW +MIS +V N +E+AL + M + + TFS +
Sbjct: 400 -------------EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLS 446
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
A + L L +G +H +VK +++ V SLV MY +CG+ NDA FS IS PN+ +
Sbjct: 447 ATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVS 506
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
+ +++GYS++G G +A+ LF ++ PN TF+ +LSACV G V+ G K F+SMK
Sbjct: 507 YNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMK 566
Query: 527 -SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
SY + P +HY C+VDLLGRSG L +A I MP + + VWG+LLSA + +++
Sbjct: 567 SSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLA 626
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGK---WGKKMDIRKRLTHLEVKKDPGCSWIEL 642
E AA+K+ L+ + YV+LS +Y+++GK + M+I+K +KKDPG SWI L
Sbjct: 627 ELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKK---SKRIKKDPGSSWIIL 683
Query: 643 NSRVHAFSVEDRNNPN 658
VH F D + N
Sbjct: 684 KGEVHNFLAGDESQLN 699
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 200/605 (33%), Positives = 310/605 (51%), Gaps = 70/605 (11%)
Query: 98 NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
N + +H L + +GY FV S L Y ++A++VFD
Sbjct: 128 NDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFD-------------- 173
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
+P D ++W L++G S +AL+ F M ++G P+
Sbjct: 174 -----------------TVPSPDTILWNTLLAGLPGS-----EALEAFVRMVDAGRVRPD 211
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
T S +RA A G+ VHG +KCG E + L+ Y C D A ++D
Sbjct: 212 STTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFD 271
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDD 333
R++NP L A N+LI+G G +E + +F LT + NS + ++I Y+ +G
Sbjct: 272 RMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGH--- 328
Query: 334 SKRLFEKMPHRSII------------SLNTMISVIPEME-----------RNPVTWNSMI 370
L + H ++ +L T+ + +ME + +WN+MI
Sbjct: 329 --ELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMI 386
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
SGY QN L E A+ L+ M++L + T S AC+ LG+L G+ +H + K E
Sbjct: 387 SGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLE 446
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
NVYV T+L+DMY++CGSI +A++ F + + NV +W A+++GY HG G+EA+ L++ M
Sbjct: 447 LNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDM 506
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGH 549
L+ I+P ++TF+ V+ AC GLV+EG K+FR M + Y + P +EH TC+VDLLGR+G
Sbjct: 507 LDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGK 566
Query: 550 LHEAEEFIKDMPIE-LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L+EA E I + P + VWGALL AC N ++ + A+QK+F LD + YV+LSN
Sbjct: 567 LNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSN 626
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+Y + + +R+ ++ K PGC+ IE+ R H F D +P IY+ LE
Sbjct: 627 LYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLER 686
Query: 669 LTANL 673
LTA +
Sbjct: 687 LTAKM 691
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 208/488 (42%), Gaps = 71/488 (14%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR +FD +P + WNT+L G + + +V V+ + TT ++ L A+
Sbjct: 168 ARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRMVDA---GRVRPDSTTLASSLRAAAE 224
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ + G+ +H +K G E V +GL+ Y+ C +++ A+ +FD
Sbjct: 225 ASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFD------------- 271
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENM 215
+M D+V + LISGY SV+G E +++LF+ + SG
Sbjct: 272 ------------------RMDNPDLVAYNALISGY--SVNGMVESSVELFKELTASGWR- 310
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN T +VI + G + +H ++K + D + AL YC + A +
Sbjct: 311 PNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSI 370
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQV 331
+D + + + N++I+G G E A +F + E N I+ +S + A G +
Sbjct: 371 FDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGAL 430
Query: 332 DDSKRLFEKMPHRSIISLNTMI------------------SVIPEME-RNPVTWNSMISG 372
K + ++ + + LN + S+ M+ +N V+WN+MISG
Sbjct: 431 SLGKWV-HRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISG 489
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
Y + +AL+LY M I T STF + +ACS G + +GQ + + E
Sbjct: 490 YGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTN---EYR 546
Query: 433 VYVG----TSLVDMYSRCGSINDAQASFSSI--SSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ G T +VD+ R G +N+A S S+ W AL+ H A L
Sbjct: 547 ITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLA 606
Query: 487 FEIMLEQD 494
+ + E D
Sbjct: 607 SQKLFELD 614
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 140/326 (42%), Gaps = 65/326 (19%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + +A+ LFD+M +V++N ++ GYS + S+ L + S + N +T ++
Sbjct: 261 GDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVI 320
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
V + + + +H V+K+ + V + L Y ++E A+ +FD + E
Sbjct: 321 PVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTME 380
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY Q L E A+ LF+ M+E
Sbjct: 381 SWNAMISGYAQNGL--------------------------------TEMAVALFQLMQEL 408
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
PN T S + ACA LGA GK VH ++ K E + + ALI+ Y C +
Sbjct: 409 NVQ-PNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAE 467
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A ++DR++N N +S+N+MI GY ++GQ
Sbjct: 468 ARSIFDRMDN-------------------------------KNVVSWNAMISGYGLHGQG 496
Query: 332 DDSKRLFEKM-PHRSIISLNTMISVI 356
++ +L++ M R + + +T +SVI
Sbjct: 497 AEALKLYKDMLDARILPTSSTFLSVI 522
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 106/223 (47%), Gaps = 34/223 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VST C R + +AR++FD M +T+ SWN M+ GY++ + +++L M
Sbjct: 349 LVSTALTTLYC-RLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQE 407
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
NV+ N T S+ LS CA L +L GK +H ++ K E +V + L+ YA C I E
Sbjct: 408 LNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAE 467
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ +FD + N + W+ M ISGY G
Sbjct: 468 ARSIFDRMDNKNVVSWNAM-------------------------------ISGYGLHGQG 496
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
E ALKL++ M ++ +P TF SVI AC+ G EG+ V
Sbjct: 497 AE-ALKLYKDMLDA-RILPTSSTFLSVIYACSHGGLVDEGQKV 537
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 209/650 (32%), Positives = 335/650 (51%), Gaps = 64/650 (9%)
Query: 52 WNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLV 110
WN ++ +K F E L + + H +K + T+ ++L C+ L + GK +H V
Sbjct: 73 WNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHV 132
Query: 111 LKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAF 170
+KSG+ V S + YA +CN+ DA
Sbjct: 133 IKSGFAMDVVVMSSAVGMYA-------------------------------KCNVFEDAI 161
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+F +MP++DV W +IS Y + DG EKAL+LF M+ SG P+ T +VI +CA
Sbjct: 162 KLFDEMPERDVASWNNVISCYYQ--DGQPEKALELFEEMKVSGFK-PDSVTLTTVISSCA 218
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
RL GK +H L++ GF D + AL++ Y C + A V+++++ + + NS
Sbjct: 219 RLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNS 278
Query: 290 LINGL---------ISMGRIEDAELIFNRLTEANSI----------SYNSMIKGYAVYGQ 330
+I G I + R D E I LT +SI I GY + +
Sbjct: 279 MIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNR 338
Query: 331 VD-----DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
V+ +S + +I S + +P+ N V+WN MISGYV+ + +AL +
Sbjct: 339 VEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKT--NVVSWNVMISGYVKVGSYLEALVI 396
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ MRK + TF+ + ACS L L++G+ +H ++++ E N V +L+DMY++
Sbjct: 397 FTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAK 456
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CG++++A F+ + + +WT+++ Y HG EA+ LFE M + D P+ TF+ +
Sbjct: 457 CGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAI 516
Query: 506 LSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP-IE 563
LSAC AGLV+EG F M YG P +EHY+C++DLLGR G L EA E ++ P I
Sbjct: 517 LSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIR 576
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
D + L SAC +++GE+ + + D S Y+ILSN+YA + KW + +R
Sbjct: 577 EDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVR 636
Query: 624 KRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
++ L +KK+PGCSWIE+ R+H F VED+++P ++IY + L +++
Sbjct: 637 LKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHV 686
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 205/439 (46%), Gaps = 56/439 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A LFD+MP R V SWN ++ Y + + +++L L M S K + T +T++S CA+
Sbjct: 160 AIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCAR 219
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L L GK+IH +++SG+ FV S L+ Y C +E AK VF+++ N + W+ M
Sbjct: 220 LLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSM 279
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ GY + G +KS ++LFR M E G P
Sbjct: 280 IAGYS--------------------------LKGDSKS------CIELFRRMDEEGIR-P 306
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
T S++ AC+R GK +HG +I+ E D + +LI+ Y C A V+
Sbjct: 307 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 366
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMI---------- 322
+ + + N +I+G + +G +A +IF + +A ++I++ S++
Sbjct: 367 QNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLE 426
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------ERNPVTWNSMISGYV 374
KG ++ + +SK ++ +++ + + E ER+ V+W SMI+ Y
Sbjct: 427 KGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYG 486
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNV 433
+ +AL+L+ M++ + TF + ACS G + +G + + + F+ V
Sbjct: 487 SHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAV 546
Query: 434 YVGTSLVDMYSRCGSINDA 452
+ L+D+ R G + +A
Sbjct: 547 EHYSCLIDLLGRVGRLREA 565
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 182/386 (47%), Gaps = 43/386 (11%)
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
S+++ C +GK++H ++ G + + ++ +LI Y C F A V+ +ENP
Sbjct: 8 SLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP 67
Query: 283 CLNASNSLINGLISMGR-----IEDAELIFNRL-----TEANSISYNSMIKGYAVYGQVD 332
+L NGL++ IE E +F+RL + ++ +Y S++K + G+V
Sbjct: 68 L---DITLWNGLMAACTKNFIFIEGLE-VFHRLLHFPYLKPDAFTYPSVLKACSGLGRVG 123
Query: 333 DSKRLFEKMPHRSIIS----------------------LNTMISVIPEM-ERNPVTWNSM 369
+ KM H +I I + EM ER+ +WN++
Sbjct: 124 -----YGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNV 178
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
IS Y Q+ EKAL+L+ M+ T + + +C+ L L++G+ +H LV++ F
Sbjct: 179 ISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGF 238
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ +V ++LVDMY +CG + A+ F I NV +W +++ GYS G + LF
Sbjct: 239 ALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRR 298
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
M E+ I P T +L AC R+ + G I + V + + ++DL + G+
Sbjct: 299 MDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGN 358
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSA 575
+ AE ++MP + + V W ++S
Sbjct: 359 IGSAENVFQNMP-KTNVVSWNVMISG 383
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 64/313 (20%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L A+ +F+Q+ + VVSWN+M+ GYS + L M ++ TT S
Sbjct: 253 GKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLS 312
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+IL C++ +L GK IH ++++ E FV S L+ Y C I A+ VF + +
Sbjct: 313 SILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKT 372
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N + W++M+ GYV+ V +AL +F M
Sbjct: 373 NVVSWNVMISGYVK--------------------------------VGSYLEALVIFTDM 400
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
R++G P+ TF SV+ AC++L +GK +H +I+ E +E + GAL++ Y C A
Sbjct: 401 RKAGVK-PDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGA 459
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
D A+ IFN+L E + +S+ SMI Y +
Sbjct: 460 VDEALH-------------------------------IFNQLPERDFVSWTSMIAAYGSH 488
Query: 329 GQVDDSKRLFEKM 341
GQ ++ +LFEKM
Sbjct: 489 GQAFEALKLFEKM 501
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 36/211 (17%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
+CG G +A N+F MP VVSWN M+ GY K + E+L + + M ++ VK + T
Sbjct: 355 KCGNIG---SAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAIT 411
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
F+++L C+QL L GK+IH +++S E E V LL YA C ++EA +F++L
Sbjct: 412 FTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQL- 470
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
P++D V WT +I+ Y E ALKLF
Sbjct: 471 ------------------------------PERDFVSWTSMIAAYGSHGQAFE-ALKLFE 499
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEG 237
M++S + P++ TF +++ AC+ G EG
Sbjct: 500 KMQQS-DAKPDKVTFLAILSACSHAGLVDEG 529
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 204/677 (30%), Positives = 343/677 (50%), Gaps = 59/677 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I STN I ++G L AR LFD M RT V+W ++ GY++ +F E+ L M R
Sbjct: 132 IFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGR 191
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + + +T+LS + +S+ + +Q+H V+K GY+ V + LL
Sbjct: 192 HGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLL----------- 240
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
Y + + AF +F +P++D V + L++GY+K
Sbjct: 241 --------------------DSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFN 280
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E A+ LF M+E G P E+TF +++ A +L G+ VHG ++KC F ++ +
Sbjct: 281 RE-AINLFFKMQEVGYR-PTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVAN 338
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-----ELIFNRLTE 312
AL++FY + A +++ + + N L+ GR++++ EL F
Sbjct: 339 ALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDR 398
Query: 313 AN----------SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER- 361
N +IS N I G ++ Q + + E + S++ + E R
Sbjct: 399 RNFPFATLLSIAAISLNLDI-GRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRI 457
Query: 362 -------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+ V W +MIS YVQ LHE L+L++ M++ I +T++ + AC+ L SL
Sbjct: 458 FSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASL 517
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
G+ LH+H++ + + SNV+ G++LVDMY++CGSI DA F + N +W AL++ Y
Sbjct: 518 TLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAY 577
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPT 533
+ +G G + LFE M+ + P++ + + +L AC GLV EG++ F SM + Y +VP
Sbjct: 578 AQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPK 637
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
EHY +D+L R G EAE+ + MP E D ++W ++L++C N E+ ++AA ++F
Sbjct: 638 KEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLF 697
Query: 594 GLDK-KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
+ + + YV +SNIYA G+W ++K + VKK P SW+E+ + H F+
Sbjct: 698 NMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTAN 757
Query: 653 DRNNPNCNVIYATLEHL 669
D+ +P I L+ L
Sbjct: 758 DKTHPQMREIMKKLDEL 774
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 232/490 (47%), Gaps = 29/490 (5%)
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
++K+G+ + + L+ + ++ A+++FDE+ N + M++GY++ +S+A
Sbjct: 92 IIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEA 151
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+F M ++ V WT LI GYA++ + +A LF M G + P+ + +++
Sbjct: 152 RTLFDSMFQRTAVTWTMLIGGYAQN-NQFREAFGLFIEMGRHGID-PDHVSLATLLSGFT 209
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
+ E + VH +IK G++ + +L++ YC + A ++++ + N+
Sbjct: 210 EFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNA 269
Query: 290 LINGLISMGRIEDAELIFNRLTEA-------------------NSISYNSMIKGYA---- 326
L+ G G +A +F ++ E + I + + G+
Sbjct: 270 LLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCN 329
Query: 327 -VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
V+ + L H ++ + + +PE++ +++N +++ Y N +++L+L
Sbjct: 330 FVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVD--GISYNVLVTCYAWNGRVKESLEL 387
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ ++ DR F+ L + +L G+ +H+ + T S + VG SLVDMY++
Sbjct: 388 FKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAK 447
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CG +A FS ++ + WTA+++ Y GL + + LF M I +AAT+ +
Sbjct: 448 CGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASI 507
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
+ AC + G ++ + G + + + +VD+ + G + +A + ++MP+ +
Sbjct: 508 VRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVR-N 566
Query: 566 AVVWGALLSA 575
+V W AL+SA
Sbjct: 567 SVSWNALISA 576
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 123/541 (22%), Positives = 234/541 (43%), Gaps = 62/541 (11%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
TL+VS + + C + L A LF+ +P R V++N +L GYSK E+++L M
Sbjct: 232 TLVVSNSLLDSYC-KTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKM 290
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ E TF+ IL+ QL+ + G+Q+H V+K + FV + LL FY+ +
Sbjct: 291 QEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRV 350
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
EA ++F E MP+ D + + L++ YA +
Sbjct: 351 VEASKLFYE-------------------------------MPEVDGISYNVLVTCYAWN- 378
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+++L+LF+ ++ +G + N + F +++ A G+ +H I + +
Sbjct: 379 GRVKESLELFKELQFTGFDRRN-FPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILV 437
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE--- 312
G +L++ Y C F A R++ L ++I+ + G ED +F +
Sbjct: 438 GNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKI 497
Query: 313 -ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII-----------------SLNTMIS 354
A++ +Y S+++ A + K+L + I S+ +
Sbjct: 498 GADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQ 557
Query: 355 VIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
+ EM RN V+WN++IS Y QN + L+L+ M + + + + ACS G
Sbjct: 558 MFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGL 617
Query: 414 LQQG-QLLHA--HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTA 469
+++G Q + + K + Y T +DM R G ++A+ + + P+ W++
Sbjct: 618 VEEGLQYFDSMTRIYKLVPKKEHYAST--IDMLCRGGRFDEAEKLMAQMPFEPDEIMWSS 675
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
++N H A + ++ +AA +V + + AG + K+ ++M+ G
Sbjct: 676 VLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERG 735
Query: 530 V 530
V
Sbjct: 736 V 736
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 177/412 (42%), Gaps = 59/412 (14%)
Query: 222 DSVIRACAR-----LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+++I+ C R L A V +IK GF + L++ + +GA +++
Sbjct: 65 NNIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLF 124
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
D + + + ++N++I G I G + +A +F+ + + ++++ +I GYA Q ++
Sbjct: 125 DEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFG 184
Query: 337 LFEKMPHRSI----ISLNTMISVIPEM--------------------------------- 359
LF +M I +SL T++S E
Sbjct: 185 LFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYC 244
Query: 360 ----------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
ER+ VT+N++++GY + + +A+ L+ M+++ T TF+
Sbjct: 245 KTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAA 304
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ A L ++ GQ +H +VK F NV+V +L+D YS+ + +A F + +
Sbjct: 305 ILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVD 364
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
++ L+ Y+ +G E++ LF+ + F +LS + ++ G +I
Sbjct: 365 GISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHS 424
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + +VD+ + G EA D+ I+ +V W A++S+
Sbjct: 425 QTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQ-SSVPWTAMISS 475
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 65/332 (19%)
Query: 7 QSQTLMTQE-TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKF 65
SQT++T + I+ N + + G+ A +F + I++ V W M+ Y +
Sbjct: 423 HSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLH 482
Query: 66 DESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
++ L L M R+ + + T+++I+ CA L SL GKQ+H ++ SGY F GS L
Sbjct: 483 EDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSAL 542
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
+ YA C I++A ++F E+ N + W+
Sbjct: 543 VDMYAKCGSIKDALQMFQEMPVRNSVSWN------------------------------- 571
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
LIS YA++ DG + L+LF M SG P+ + S++ AC+ G L+
Sbjct: 572 ALISAYAQNGDG-DCTLRLFEEMVRSGLQ-PDSVSLLSILCACSHCG-----------LV 618
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
+ G ++ FD R+Y + P S I+ L GR ++AE
Sbjct: 619 EEGLQY-----------------FDSMTRIYKLV--PKKEHYASTIDMLCRGGRFDEAEK 659
Query: 306 IFNRLT-EANSISYNSMIKGYAVYGQVDDSKR 336
+ ++ E + I ++S++ ++ + +K+
Sbjct: 660 LMAQMPFEPDEIMWSSVLNSCGIHKNQELAKK 691
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 210/696 (30%), Positives = 348/696 (50%), Gaps = 91/696 (13%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VSTN I+ ++G L AR LFD M RT V+W ++ GYS+ +F E+ L M R
Sbjct: 84 VSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRC 143
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ + TF T+LS C Q+ ++K GY+ VG+ L+ Y ++ A
Sbjct: 144 GTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLA 203
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
++F E+ E + + ++ M+ GY + D D
Sbjct: 204 CQLFKEMPEIDSVSYNAMITGYSK-----DGLD--------------------------- 231
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
EKA+ LF M+ SG P E+TF +V+ A L G+ +H +IK F ++ + A
Sbjct: 232 EKAVNLFVEMQNSGLK-PTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNA 290
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-------- 310
L++FY ++ A +++D + + N +I+G G+ + A +F L
Sbjct: 291 LLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRK 350
Query: 311 -----------------------------TEANS--ISYNSMIKGYAVYGQVDDSKRLFE 339
T A+S + NS++ YA G+ ++++ +F
Sbjct: 351 QFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFT 410
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+ HRS V W +MIS YVQ +E+ LQL+ MR+ ++ ++
Sbjct: 411 NLTHRS-----------------AVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQA 453
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
TF+ L A + + SL G+ LH+ ++K+ F SNV+ G++L+D+Y++CGSI DA +F +
Sbjct: 454 TFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEM 513
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
N+ +W A+++ Y+ +G + F+ M+ + P++ +F+GVLSAC +GLV EG+
Sbjct: 514 PDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGL 573
Query: 520 KIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
F SM Y + P EHY VVD+L RSG +EAE+ + +MPI+ D ++W ++L+AC
Sbjct: 574 WHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRI 633
Query: 579 WMNMEVGERAAQKMFGLDK-KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
N E+ RAA ++F +++ + + YV +SNIYA G+W + K + VKK P
Sbjct: 634 HKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAY 693
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
SW+E+ H FS DR +P I ++ LT +
Sbjct: 694 SWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTM 729
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 226/481 (46%), Gaps = 59/481 (12%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
E+ +A+++F+++ N + ++M+ GYV+ + +A +F M ++ V WT LI GY++
Sbjct: 67 ELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQ 126
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
++ ++A +LF M+ G P+ TF +++ C + V +IK G++
Sbjct: 127 -LNQFKEAFELFVQMQRCGTE-PDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRL 184
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
+G L++ YC D A +++ + + N++I G G E A +F + +
Sbjct: 185 IVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNS 244
Query: 314 ---------------------------------------NSISYNSMIKGYAVYGQVDDS 334
N N+++ Y+ + V D+
Sbjct: 245 GLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDA 304
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
++LF++MP E++ V++N +ISGY + H+ A L+ ++ A
Sbjct: 305 RKLFDEMP-----------------EQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAF 347
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
DR + F+ + S + G+ +HA + T +S + VG SLVDMY++CG +A+
Sbjct: 348 DRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEM 407
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F++++ + WTA+++ Y G E + LF M + ++ + ATF +L A
Sbjct: 408 IFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIAS 467
Query: 515 VNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
++ G ++ + G + + + ++D+ + G + +A + ++MP + + V W A++S
Sbjct: 468 LSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMIS 526
Query: 575 A 575
A
Sbjct: 527 A 527
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 127/560 (22%), Positives = 247/560 (44%), Gaps = 76/560 (13%)
Query: 6 TQSQTLMTQ---ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
TQ QT + + ++ ++ N + ++ +L A LF +MP VS+N M+ GYSK
Sbjct: 169 TQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKD 228
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
+++++L M S +K E TF+ +L L+ ++ G+QIH V+K+ + FV
Sbjct: 229 GLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVS 288
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ LL FY+ + +A+++FDE+ E + + +++++ GY AFD+F
Sbjct: 289 NALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLF--------- 339
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
+ L+ + R+ ++ F +++ + + G+ +H
Sbjct: 340 -----------------RELQFTAFDRK-------QFPFATMLSIASNTLDWEMGRQIHA 375
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
I + + +G +L++ Y C F+ A ++ L + ++I+ + G E+
Sbjct: 376 QTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEE 435
Query: 303 AELIFNRLTEANSI----SYNSMIKGYAVYGQVDDSKRLFEKMPHRSII----------- 347
+FN++ +A+ I ++ S+++ A + K+L H II
Sbjct: 436 GLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQL-----HSFIIKSGFMSNVFSG 490
Query: 348 -----------SLNTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
S+ + EM +RN V+WN+MIS Y QN E L+ + M +
Sbjct: 491 SALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQ 550
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLH----AHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+F + ACS G +++G L H + K Y S+VDM R G N+
Sbjct: 551 PDSVSFLGVLSACSHSGLVEEG-LWHFNSMTQIYKLDPRREHYA--SVVDMLCRSGRFNE 607
Query: 452 AQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A+ + + P+ W++++N H A + + + + +AA +V + +
Sbjct: 608 AEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYA 667
Query: 511 RAGLVNEGMKIFRSMKSYGV 530
AG K+ ++M+ GV
Sbjct: 668 AAGQWENVSKVHKAMRDRGV 687
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 18/295 (6%)
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
+P + SN + + G + A +F ++ N++S N MI GY G + ++++LF+
Sbjct: 49 DPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDG 108
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
M +ER VTW +I GY Q N ++A +L++ M++ + T
Sbjct: 109 M-----------------VERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVT 151
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
F L C+ Q + ++K ++S + VG +LVD Y + ++ A F +
Sbjct: 152 FVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP 211
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ ++ A++ GYS GL +AV LF M + P TF VL A + + G +
Sbjct: 212 EIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQ 271
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
I + V + ++D + + +A + +MP E D V + ++S
Sbjct: 272 IHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP-EQDGVSYNVIISG 325
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 158/354 (44%), Gaps = 48/354 (13%)
Query: 7 QSQTLMTQ-ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKF 65
+QT++T ++ I+ N + + G+ A +F + R+ V W M+ Y + +
Sbjct: 374 HAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFY 433
Query: 66 DESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
+E L L + M +++V ++ TF+++L A + SL GKQ+H ++KSG+ F GS L
Sbjct: 434 EEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSAL 493
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
L YA C I++A + F E+ + N + W+ M+ Y Q
Sbjct: 494 LDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQ----------------------- 530
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
+G A E LK F+ M SG P+ +F V+ AC+ G EG + H +
Sbjct: 531 ---NGEA------EATLKSFKEMVLSGLQ-PDSVSFLGVLSACSHSGLVEEG-LWHFNSM 579
Query: 246 KCGFEFDESIG--GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED- 302
++ D ++++ C F+ A ++ + ++ + + +++ RI
Sbjct: 580 TQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMP---IDPDEIMWSSVLNACRIHKN 636
Query: 303 -------AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
A+ +FN ++ Y +M YA GQ ++ ++ + M R + L
Sbjct: 637 QELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKL 690
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 325/646 (50%), Gaps = 85/646 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A +F+ + I + +N ++ ++K F +++ L + + + T+ +
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
L + +G++++ V+KSG E +V + L+ YA ++ ++VF+E
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEE------- 192
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
MP++DVV W LISGY K E A+ +FR M++
Sbjct: 193 ------------------------MPQRDVVSWNVLISGYVKC-RRYEDAVDVFRRMQQQ 227
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
PNE T S + AC L GK +H ++ F IG AL++ YC C
Sbjct: 228 SSLRPNEATVVSTLSACIALKMLELGKEIH-RYVREQLGFTIKIGNALVDMYCKC----- 281
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
G + A IFN + I + SM+ GY GQ+
Sbjct: 282 --------------------------GHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQL 315
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
D+++ LFE+ P R + V W +MI+GYVQ N + A+ L+ M+
Sbjct: 316 DEARELFERSPVRDV-----------------VLWTAMINGYVQFNRFDDAVALFREMQI 358
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+ R T L C+ LG+L+QG+ +H ++ + + VGT+L++MY++CG I
Sbjct: 359 KRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEK 418
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
+ F+ + + A+WT+++ G + +G S+A+ LF M++ + P+ TF+GVLSAC
Sbjct: 419 SLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSH 478
Query: 512 AGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP---IELDAV 567
GLV EG K FRSM + Y + P LEHY C++DLLGR+G L EAEE I+ P E+
Sbjct: 479 GGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVP 538
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
++GALLSAC N+E+GER A+++ G++ S + +L+NIYA +W +R+++
Sbjct: 539 LYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMK 598
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
L VKK PGCS +E+N VH F V D ++P IY+ L+ + L
Sbjct: 599 DLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPL 644
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC-----GSIND 451
T+ + L C + L+Q + +++T F + G +L C G+++
Sbjct: 31 TKKSCIFLLKNCKSMQHLKQ---IQTQILRTGFHQS---GDTLNKFMVCCTDPSIGNLHY 84
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A+ F+ I P + + ++ ++ +G +AVLLF + E+ + P+ T+ V A
Sbjct: 85 AERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGC 144
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTC--VVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
G V EG K++ + G+ + Y C ++D+ G + + ++MP + D V W
Sbjct: 145 LGEVREGEKVYGFVVKSGL--EFDTYVCNSLMDMYAEVGRVQNLRQVFEEMP-QRDVVSW 201
Query: 570 GALLSA 575
L+S
Sbjct: 202 NVLISG 207
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 207/642 (32%), Positives = 333/642 (51%), Gaps = 84/642 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-VKLNETTFSTI 90
G+L +AR +FD+M R VVSW +M+CGY++ +++ L M R V N T +
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
+S CA+L L G++++ + SG E + + S L+ Y C I+ AKR+FDE N
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
L + M YV+ L +AL +F M +
Sbjct: 303 DLCNAMASNYVRQGLT--------------------------------REALGVFNLMMD 330
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
SG P+ + S I +C++L GK HG +++ GFE ++I ALI+ Y C D
Sbjct: 331 SGVR-PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
A R IF+R++ +++NS++ GY G+
Sbjct: 390 TAFR-------------------------------IFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
VD + FE MP E+N V+WN++ISG VQ +L E+A++++ +M+
Sbjct: 419 VDAAWETFETMP-----------------EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 391 -KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+ ++ T + AC LG+L + ++ ++ K + +V +GT+LVDM+SRCG
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
A + F+S+++ +V+AWTA + + G A+ LF+ M+EQ + P+ FVG L+AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 510 VRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
GLV +G +IF SM K +GV P HY C+VDLLGR+G L EA + I+DMP+E + V+
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W +LL+AC N+E+ AA+K+ L + +YV+LSN+YA G+W +R +
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
++K PG S I++ + H F+ D ++P I A L+ ++
Sbjct: 702 KGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 175/368 (47%), Gaps = 29/368 (7%)
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
++ LI GYA S C +A+ LF M SG + P++YTF + ACA+ A G +HG
Sbjct: 101 MYNSLIRGYASS-GLCNEAILLFLRMMNSGIS-PDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
L++K G+ D + +L+ FY C D A +V+D + + + S+I G +D
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 303 AELIFNRLTEANSISYNSM-----IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
A +F R+ ++ NS+ I A ++ ++++ + + I + M+S +
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 358 EM------------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+M N N+M S YV+ L +AL ++ M + R
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+ +CS L ++ G+ H ++++ FES + +L+DMY +C + A F +
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
S+ V W +++ GY +G A FE M E++IV ++ ++S V+ L E +
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV----SWNTIISGLVQGSLFEEAI 454
Query: 520 KIFRSMKS 527
++F SM+S
Sbjct: 455 EVFCSMQS 462
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
+NS+I GY + L +A+ L++ M I + TF AC+ + G +H +V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV- 484
K + +++V SLV Y+ CG ++ A+ F +S NV +WT+++ GY+ +AV
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
L F ++ ++++ PN+ T V V+SAC + + G K++ +++ G+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 144/340 (42%), Gaps = 70/340 (20%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M+ +T +V+ N + NG++ A F+ MP + +VSWNT++ G + + F+E++ +
Sbjct: 398 MSNKT-VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 72 VSTMH-RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
+M + V + T +I S C L +L K I+ + K+G + +G+ L+ ++
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
C + E A +F+ L +DV WT I
Sbjct: 517 RCGDPESAMSIFNSL-------------------------------TNRDVSAWTAAIGA 545
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
A + + E+A++LF M E G P+ F + AC+ G +GK + ++K
Sbjct: 546 MAMAGNA-ERAIELFDDMIEQGLK-PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH-- 601
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNR 309
G + + + GC +++ L G +E+A +LI +
Sbjct: 602 -----GVSPEDVHYGC-----------------------MVDLLGRAGLLEEAVQLIEDM 633
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKM----PHRS 345
E N + +NS++ V G V+ + EK+ P R+
Sbjct: 634 PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERT 673
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 209/651 (32%), Positives = 339/651 (52%), Gaps = 69/651 (10%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHC 108
V WN L Y + + E++ M +S V + T+ ILSV A LN L GKQIH
Sbjct: 262 VTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHG 321
Query: 109 LVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD 168
V++ G++ F V + + Y + A+R+F ++ E
Sbjct: 322 AVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKE--------------------- 360
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRA 227
D++ W +ISG A+S G E+ +L+LF + SG +P+++T SV+RA
Sbjct: 361 ----------VDLISWNTVISGCARS--GLEECSLRLFIDLLRSGL-LPDQFTITSVLRA 407
Query: 228 CARLG-AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
C+ L ++C G+ VH +K G D + ALI+ Y + A ++ + L +
Sbjct: 408 CSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLAS 467
Query: 287 SNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
N++++G +A +F+ + E A+ I++ + K ++ K++
Sbjct: 468 WNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQI----- 522
Query: 343 HRSIISLNT-----MISVIPEM------------------ERNPVTWNSMISGYVQNNLH 379
H +I + +IS I +M + V W ++ISG V+N
Sbjct: 523 HAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEE 582
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
E+AL Y MR + TF+ L ACS L +L+QG+ +HA+++K + +V TSL
Sbjct: 583 EQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSL 642
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
VDMY++CG+I DA F +++ +VA W A++ G + HG EA+ F M + + P+
Sbjct: 643 VDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDR 702
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
TF+GVLSAC +GL ++ K F SM K+YGV P +EHY+C+VD L R+GH+ EAE+ +
Sbjct: 703 VTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVS 762
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
MP E A ++ LL+AC + E GER A+K+F +D +AYV+LSNIYA +W
Sbjct: 763 SMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWEN 822
Query: 619 KMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+ R + + VKK+PG SWI++ ++VH F DR++ ++IY +E++
Sbjct: 823 AVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYV 873
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 143/629 (22%), Positives = 272/629 (43%), Gaps = 81/629 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWA------KFDESLSLV 72
TN IT + G L +AR LFD P R +V++N +L Y+ K E+ +
Sbjct: 51 TNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIF 110
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
+ +S + T S + +C S + + +K G + FV L+ YA
Sbjct: 111 RLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKF 170
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQ----------------CNLMSD-------- 168
I EA+ +FD + + +LW++M+ YV+ L D
Sbjct: 171 QRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
Query: 169 -------------------AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
A +F+ DV VW K +S Y ++ +G E A+ FR M
Sbjct: 231 MGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWE-AVDCFRDMI 289
Query: 210 ESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+S +P + T+ ++ A L GK +HG +++ G++ S+ + I Y +
Sbjct: 290 KS--RVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGS 347
Query: 269 FDGAMRVYDRLENPCLNASNSLING----------------LISMGRIEDAELIFNRLTE 312
+ A R++ +++ L + N++I+G L+ G + D I + L
Sbjct: 348 VNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRA 407
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER--------NPV 364
+S+ S G V+ + + + ++I + + + E E +
Sbjct: 408 CSSLE-ESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLA 466
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+WN+M+ G+ ++ + +AL+L+ M + + TF+ A CL LQQG+ +HA +
Sbjct: 467 SWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVV 526
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
+K F +++V + ++DMY +CG + A+ F+ I SP+ AWT +++G +G +A+
Sbjct: 527 IKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQAL 586
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
+ M + P+ TF ++ AC + +G +I ++ T +VD+
Sbjct: 587 FTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMY 646
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G++ +A + M +W A++
Sbjct: 647 AKCGNIEDAYGLFRRMNTR-SVALWNAMI 674
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 221/516 (42%), Gaps = 68/516 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+ + N AI + G + AR +F QM ++SWNT++ G ++ + SL L
Sbjct: 329 DQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFID 388
Query: 75 MHRSNVKLNETTFSTILSVCAQL-NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+ RS + ++ T +++L C+ L S G+Q+H LK+G FV + L+ Y+
Sbjct: 389 LLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGG 448
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++EEA+ +F D F D+ W ++ G+
Sbjct: 449 KMEEAELLFHN----------------------QDGF---------DLASWNAMMHGFTV 477
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
S D +AL+LF M E GE ++ TF + +A L +GK +H ++IK F +D
Sbjct: 478 S-DNYREALRLFSLMHERGEK-ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDL 535
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL--- 310
+ +++ Y C A +V++++ +P A ++I+G + G E A ++++
Sbjct: 536 FVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLA 595
Query: 311 -TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN------TMISVIPEME--- 360
+ + ++ +++K ++ ++ K++ H +I+ LN M S++
Sbjct: 596 GVQPDEYTFATLVKACSLLTALEQGKQI-----HANIMKLNCAFDPFVMTSLVDMYAKCG 650
Query: 361 --------------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
R+ WN+MI G Q+ E+AL + M+ + R TF +
Sbjct: 651 NIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLS 710
Query: 407 ACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNV 464
ACS G + KT E + + LVD SR G I +A+ SS+ +
Sbjct: 711 ACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASA 770
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
+ L+N G + E + D +AA
Sbjct: 771 TMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAA 806
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/544 (21%), Positives = 229/544 (42%), Gaps = 68/544 (12%)
Query: 98 NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
+ LI GK+ H +++ SG +V + L+ YA C + A+++FD
Sbjct: 27 SDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFD-------------- 72
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS-----VDGCEKALKLFRWMRESG 212
+D+V + +++ YA + V+ +A +FR +R+S
Sbjct: 73 ---------------ITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQS- 116
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+ +T + + C G+ + + G +K G ++D + GAL+ Y + A
Sbjct: 117 VMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREA 176
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVY 328
++DR+ + N ++ + MG ++ +F+ + + +S +++ G
Sbjct: 177 RVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVG-- 234
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
K +FE+ + + + T + V + + + WN +S Y+Q +A+ +
Sbjct: 235 -----KKTVFERELEQ-VRAYATKLFVCDD-DSDVTVWNKTLSSYLQAGEGWEAVDCFRD 287
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M K + T+ V+ + L L+ G+ +H +V+ ++ V V S ++MY + GS
Sbjct: 288 MIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGS 347
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+N A+ F + ++ +W +++G + GL ++ LF +L ++P+ T VL A
Sbjct: 348 VNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRA 407
Query: 509 CVRAGLVNE---GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
C + L G ++ G+V T ++D+ + G + EAE + D
Sbjct: 408 C--SSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQD-GFD 464
Query: 566 AVVWGALLSAC-----------WFWMNMEVGERAAQKMFGLDKKPISAYVILS---NIYA 611
W A++ F + E GE+A Q F K V L I+A
Sbjct: 465 LASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHA 524
Query: 612 VLGK 615
V+ K
Sbjct: 525 VVIK 528
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 279 LENPCLNASNSLINGLISMGR--IEDAELIFNRLTEA-------NSISY--NSMIKGYAV 327
+ C + +SL+ S+ R I D++LI + T A N Y N++I YA
Sbjct: 1 MSRKCSVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAK 60
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN-LHE-----K 381
G + +++LF+ + P+ +R+ VT+N++++ Y LH+ +
Sbjct: 61 CGSLFSARKLFD---------------ITPQSDRDLVTYNAILAAYAHTGELHDVEKTHE 105
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
A ++ +R+ + TR T S LF C GS + L + VK + +V+V +LV+
Sbjct: 106 AFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVN 165
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
+Y++ I +A+ F + +V W +M Y G G E + LF + P+ +
Sbjct: 166 IYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVS 225
Query: 502 FVGVL 506
+L
Sbjct: 226 VRTIL 230
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 201/659 (30%), Positives = 346/659 (52%), Gaps = 62/659 (9%)
Query: 47 RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
R +VSW+ ++ Y+ K E++S M NE F+ + C+ ++ GK I
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 107 HCLVLKSGY-ECFEFVGSGLL-FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
+LK+GY E VG L+ F ++E A +VFD
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFD--------------------- 103
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
+MP ++VV WT +I+ + + + A+ LF M SG +P+ +T V
Sbjct: 104 ----------RMPDRNVVTWTLMITRF-QQLGFSRDAVDLFLDMVLSG-YVPDRFTLSGV 151
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA---FDGAMRVYDRLEN 281
+ ACA +G G+ H L++K G + D +G +L++ Y C A D A +V+DR+
Sbjct: 152 VSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPV 211
Query: 282 PCLNASNSLINGLISMGRI--EDAELIFNRL---TEANSISYNSMIKGYAVYGQVDDSKR 336
+ + ++I G + G E EL + + N +++S++K A + ++
Sbjct: 212 HNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQ 271
Query: 337 LFEKMPHRSIISLN----TMISVIPE--------------MERNPVTWNSMISGYVQNNL 378
++ + + S+N ++IS+ E+N V++N++++ Y ++
Sbjct: 272 VYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLN 331
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
E+A +L+ + TF+ L S +G++ +G+ +H+ ++K+ F+SN+++ +
Sbjct: 332 SEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNA 391
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+ MYSRCG+I A F+ + NV +WT+++ G++ HG + A+ F MLE + PN
Sbjct: 392 LISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPN 451
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
T++ VLSAC GL++EG+K F+SMK +G+VP +EHY CVVDLLGRSGHL EA E +
Sbjct: 452 EVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELV 511
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
MP + DA+V L AC NM++G+ AA+ + D +AY++LSN++A G+W
Sbjct: 512 NSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWE 571
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ +IRK++ + K+ GCSWIE+ ++VH F V D ++P IY L+ L + +
Sbjct: 572 EVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKEL 630
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/527 (25%), Positives = 241/527 (45%), Gaps = 68/527 (12%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
NG L +A +FD+MP R VV+W M+ + + +++ L M S + T S +
Sbjct: 92 NGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGV 151
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF---EIEEAKRVFDELHE 147
+S CA++ L G+Q HCLV+KSG + VG L+ YA C +++A++VFD +
Sbjct: 152 VSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPV 211
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFR 206
N + W+ ++ GYVQ SG GC++ A++LF
Sbjct: 212 HNVMSWTAIITGYVQ--------------------------SG------GCDREAIELFL 239
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M + G+ PN +TF SV++ACA L G+ V+ L++K +G +LI Y C
Sbjct: 240 EMVQ-GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRC 298
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMI 322
+ A + +D L L + N+++N E+A +FN + T N+ ++ S++
Sbjct: 299 GNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLL 358
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIIS----LNTMIS-------------VIPEM-ERNPV 364
G + G + +++ ++ S N +IS V EM + N +
Sbjct: 359 SGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVI 418
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAH 423
+W SMI+G+ ++ +AL+ + M + + T+ + ACS +G + +G + +
Sbjct: 419 SWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSM 478
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---L 479
V+ + +VD+ R G + +A +S+ + + HG L
Sbjct: 479 KVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDL 538
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
G A E++LEQD + A ++ + + AG E +I + MK
Sbjct: 539 GKHAA---EMILEQD-PHDPAAYILLSNLHASAGQWEEVAEIRKKMK 581
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 198/419 (47%), Gaps = 60/419 (14%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-ESLSLVSTMHRSNVKLNE 84
+C +G + AR +FD+MP+ V+SW ++ GY + D E++ L M + VK N
Sbjct: 191 AKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNH 250
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
TFS++L CA L+ + G+Q++ LV+K VG+ L+ Y+ C +E A++ FD
Sbjct: 251 FTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDV 310
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
L E K++V + +++ YAKS++ E+A +L
Sbjct: 311 LFE-------------------------------KNLVSYNTIVNAYAKSLNS-EEAFEL 338
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F + +G + N +TF S++ + +GA +G+ +H ++K GF+ + I ALI Y
Sbjct: 339 FNEIEGAGTGV-NAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYS 397
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNS 320
C + A +V++ + + + + S+I G G A F+++ EA N ++Y +
Sbjct: 398 RCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIA 457
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM-ISGYVQNNLH 379
++ + G + + + F+ S+ ++P ME + + SG++
Sbjct: 458 VLSACSHVGLISEGLKHFK--------SMKVEHGIVPRMEHYACVVDLLGRSGHL----- 504
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH---LVKTPFESNVYV 435
E+A++L +M A TF AC G++ G+ HA L + P + Y+
Sbjct: 505 EEAMELVNSMPFKADALVLRTF---LGACRVHGNMDLGK--HAAEMILEQDPHDPAAYI 558
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 116/232 (50%), Gaps = 40/232 (17%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ R G + AR FD + + +VS+NT++ Y+K +E+ L + + +
Sbjct: 289 NSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTG 348
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+N TF+++LS + + ++ G+QIH +LKSG++ + + L+ Y+ C IE A +V
Sbjct: 349 VNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQV 408
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F+E+ + N + W+ M+ G+ + G+A +A
Sbjct: 409 FNEMGDGNVISWTSMITGFAK--------------------------HGFAT------RA 436
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-------KVVHGLLIK 246
L+ F M E+G + PNE T+ +V+ AC+ +G EG KV HG++ +
Sbjct: 437 LETFHKMLEAGVS-PNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPR 487
>gi|297819724|ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323583|gb|EFH54004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 764
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 207/664 (31%), Positives = 343/664 (51%), Gaps = 61/664 (9%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDE-SLSLVSTMHRSNV 80
N I+ R G L AR LFD+MP R VVS+N + YS+ + + SL++ M ++
Sbjct: 49 NNLISMYVRCGSLEQARKLFDKMPERNVVSYNALYSAYSRNLDYASYAFSLINQMASESL 108
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
K N +TF++++ VC L ++ G +H ++K GY V + +L Y++C ++E A+R
Sbjct: 109 KPNSSTFTSLVQVCTVLEDVLMGSLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 168
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+F +C + D V W +I G ++ D E
Sbjct: 169 IF-------------------EC------------VNGGDAVAWNTMIVGIFRN-DKIED 196
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAF--CEGKVVHGLLIKCGFEFDESIGGA 258
L LFR M SG + P ++T+ V+ AC++LG++ GK++H +I D + A
Sbjct: 197 GLMLFRSMLMSGVD-PTQFTYSMVLNACSKLGSYRYSVGKLIHARMIVSDILADLPVENA 255
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
L++ YC C A V+ ++ NP L + NS+I+G G E A L++ RL ++
Sbjct: 256 LLDMYCSCGDMKEAFYVFGKIHNPNLVSWNSIISGCSENGFGEQAILMYRRLLRISTPRP 315
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPH---------RSIISLNTMISVIPE----------- 358
+ A+ + K + K+ H RS+ T++S+ +
Sbjct: 316 DEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEAESAQKVF 375
Query: 359 ---MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
ER+ V W MI G + E A+QL++ M + + S + ACS + L+
Sbjct: 376 GVITERDVVLWTEMIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGACSDMAMLR 435
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
QGQ+ H+ +KT F++ + V +LVDMY + G A++ FS +S+P++ W +++ YS
Sbjct: 436 QGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWNSMLGAYS 495
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
HG+ +A FE +LE P+A T++ +L+AC G EG ++ MK G+ +
Sbjct: 496 QHGMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKEQGITAGFK 555
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELD-AVVWGALLSACWFWMNMEVGERAAQKMFG 594
HY+C+V L+ ++G L EA E IK P E + A +W LLSAC N+++G AA ++
Sbjct: 556 HYSCMVSLVSKAGLLGEALELIKQSPPENNQAELWRTLLSACVNARNLQIGLYAADQILK 615
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL-NSRVHAFSVED 653
LD + + +++LSN+YAV G+W ++R+++ L KDPG SWIE+ N+ H FS D
Sbjct: 616 LDPEDTATHILLSNLYAVNGRWKDVAEMRRKIRGLASAKDPGLSWIEVNNNNTHVFSSGD 675
Query: 654 RNNP 657
++NP
Sbjct: 676 QSNP 679
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 178/398 (44%), Gaps = 47/398 (11%)
Query: 215 MPNEYTFDSVI---RACARLGAFCEGKVVHGLLIKCGF-EFDESI--GGALIEFYCGCEA 268
MP SV+ R C + A +H +++ G ES LI Y C +
Sbjct: 1 MPLNEIASSVVELTRKCVSITALKRACQLHAIILTAGAGSASESPYKNNNLISMYVRCGS 60
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-------ANSISYNSM 321
+ A +++D++ + + N+L + ++ A F+ + + NS ++ S+
Sbjct: 61 LEQARKLFDKMPERNVVSYNALYSAYSR--NLDYASYAFSLINQMASESLKPNSSTFTSL 118
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLN------------TMISVIPEMER-------- 361
++ V V L + H II L M S ++E
Sbjct: 119 VQVCTVLEDV-----LMGSLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECV 173
Query: 362 ---NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ-- 416
+ V WN+MI G +N+ E L L+ +M +D T+ T+S++ +ACS LGS +
Sbjct: 174 NGGDAVAWNTMIVGIFRNDKIEDGLMLFRSMLMSGVDPTQFTYSMVLNACSKLGSYRYSV 233
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+L+HA ++ + +++ V +L+DMY CG + +A F I +PN+ +W ++++G S
Sbjct: 234 GKLIHARMIVSDILADLPVENALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNSIISGCSE 293
Query: 477 HGLGSEAVLLFEIMLEQDIV-PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
+G G +A+L++ +L P+ TF + A G + + G ++
Sbjct: 294 NGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSVF 353
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
T ++ + ++G A++ + + E D V+W ++
Sbjct: 354 VGTTLLSMYFKNGEAESAQK-VFGVITERDVVLWTEMI 390
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 31/289 (10%)
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV--------KTPFESNVYVGTSLVDMY 443
+ ++ S+ L C + +L++ LHA ++ ++P+++N +L+ MY
Sbjct: 1 MPLNEIASSVVELTRKCVSITALKRACQLHAIILTAGAGSASESPYKNN-----NLISMY 55
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHH-GLGSEAVLLFEIMLEQDIVPNAATF 502
RCGS+ A+ F + NV ++ AL + YS + S A L M + + PN++TF
Sbjct: 56 VRCGSLEQARKLFDKMPERNVVSYNALYSAYSRNLDYASYAFSLINQMASESLKPNSSTF 115
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
++ C V G + + G + T V+ + G L A + +
Sbjct: 116 TSLVQVCTVLEDVLMGSLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECVNG 175
Query: 563 ELDAVVWGALLSACWFWMNMEVGERAAQKMF--GLDKKPISAYVILSNIYAVLGKW---- 616
DAV W ++ + +E G + M G+D + Y ++ N + LG +
Sbjct: 176 G-DAVAWNTMIVGIFRNDKIEDGLMLFRSMLMSGVDPTQFT-YSMVLNACSKLGSYRYSV 233
Query: 617 GK----KMDIRKRLTHLEVKK---DPGCSWIELNSRVHAFSVEDRNNPN 658
GK +M + L L V+ D CS ++ + F +NPN
Sbjct: 234 GKLIHARMIVSDILADLPVENALLDMYCSCGDMKEAFYVFG--KIHNPN 280
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 203/676 (30%), Positives = 348/676 (51%), Gaps = 59/676 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V K + ++G+L A +LFD+MP + VV+W +++ GY++ + + +L++ + M
Sbjct: 48 VVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVE 107
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S V N+ + L CA L +L G+Q+H L +++G+ ++GS L+ Y+ C +
Sbjct: 108 SGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPA 167
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AK +VF +M DVV +T LIS + ++ +
Sbjct: 168 AK-------------------------------EVFDRMDSPDVVGYTSLISAFCRNGEF 196
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI-- 255
A L + +++ + PNE+T +++ AC R+ G+ +HG LIK +S+
Sbjct: 197 ELAAEALIQMLKQGLK--PNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYS 250
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----T 311
ALI+FY F A V+D L + + S++ I GR+E+A +F +
Sbjct: 251 STALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGV 310
Query: 312 EANSISYN-------SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME---- 360
+ N + + S+ G ++ + + +++S+ ++ E+E
Sbjct: 311 DPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLN 370
Query: 361 --RNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
NP V+W + IS QN EKA+ L M FS + +C+ + SL Q
Sbjct: 371 KIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQ 430
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G H +K +S + G +L++MYS+CG + A+ +F + + +V +W +L++G++
Sbjct: 431 GMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQ 490
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLE 535
HG ++A+ +F M I P+ +TF+GVL C +G+V EG FR M Y P
Sbjct: 491 HGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPS 550
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
HY C++D+LGR+G EA I DMP E DA++W LL++C N+++G+ AA ++ L
Sbjct: 551 HYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMEL 610
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN 655
+ ++YV++SNIYA+ G+W +R+R+ VKKD GCSWIE+N+ VH F+ D +
Sbjct: 611 SDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMS 670
Query: 656 NPNCNVIYATLEHLTA 671
+PN + IY L L A
Sbjct: 671 HPNSDSIYQMLGELVA 686
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 209/677 (30%), Positives = 330/677 (48%), Gaps = 104/677 (15%)
Query: 7 QSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD 66
+ TL + + N +T R G++ A+ LF + +VSWNT++ S+ +F+
Sbjct: 457 HAYTLRNGDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFE 516
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE--FVGSG 124
E+L V M V+ + T +++L C+QL L G++IHC L++G + E FVG+
Sbjct: 517 EALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNG-DLIENSFVGTA 575
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
L+ Y NC + ++ + VFD + +W+ +L GY + + FD
Sbjct: 576 LVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYAR-----NEFD------------- 617
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
++AL+LF M E PN TF SV+ AC R F + + +HG +
Sbjct: 618 --------------DQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYI 663
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
+K GF D+ + AL++ Y MGR+E ++
Sbjct: 664 VKRGFGKDKYVQNALMDMYS-------------------------------RMGRVEISK 692
Query: 305 LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV 364
IF R+ + + +S+N+MI G V G+ DD+ L +M R + + P
Sbjct: 693 TIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPF 752
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
NS+ T + C+ L +L +G+ +HA+
Sbjct: 753 KPNSV------------------------------TLMTVLPGCAALAALGKGKEIHAYA 782
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
VK +V VG++LVDMY++CG +N A F + NV W L+ Y HG G EA+
Sbjct: 783 VKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEAL 842
Query: 485 LLFEIML------EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHY 537
LF IM + I PN T++ + +AC +G+V+EG+ +F +MK S+GV P +HY
Sbjct: 843 ELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHY 902
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAV-VWGALLSACWFWMNMEVGERAAQKMFGLD 596
C+VDLLGRSG + EA E I MP L+ V W +LL AC ++E GE AA+ +F L+
Sbjct: 903 ACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLE 962
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
S YV++SNIY+ G W + + +RK++ + V+K+PGCSWIE VH F D ++
Sbjct: 963 PNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASH 1022
Query: 657 PNCNVIYATLEHLTANL 673
P ++ LE L+ +
Sbjct: 1023 PQSKELHEYLETLSQRM 1039
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 128/538 (23%), Positives = 216/538 (40%), Gaps = 125/538 (23%)
Query: 47 RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
R+ W +L + + F +++S + M + + F +L A ++ L GKQI
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQI 352
Query: 107 HCLVLKSGYECFE--FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
H V K G+ V + L+ Y C ++ A++VFD++
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDI------------------- 393
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM-PNEYTFDS 223
P +D V W +I+ + + E +L LFR M EN+ P +T S
Sbjct: 394 ------------PDRDHVSWNSMIATLCR-FEEWELSLHLFRLMLS--ENVDPTSFTLVS 438
Query: 224 VIRACARL-GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
V AC+ + G GK VH ++ +G +R Y
Sbjct: 439 VAHACSHVRGGVRLGKQVHAYTLR-----------------------NGDLRTY------ 469
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
+N+L+ +GR+ DA+ +F V D K L
Sbjct: 470 ---TNNALVTMYARLGRVNDAKALFG----------------------VFDGKDL----- 499
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
+S NT+IS + QN+ E+AL M + T +
Sbjct: 500 ----VSWNTVISSLS-----------------QNDRFEEALMYVYLMIVDGVRPDGVTLA 538
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
+ ACS L L+ G+ +H + ++ N +VGT+LVDMY C + F +
Sbjct: 539 SVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVR 598
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVN--EG 518
VA W AL+ GY+ + +A+ LF E++ E + PNA TF VL ACVR + + EG
Sbjct: 599 RTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEG 658
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+ + + +G +++ ++D+ R G + ++ M + D V W +++ C
Sbjct: 659 IHGYIVKRGFGKDKYVQN--ALMDMYSRMGRVEISKTIFGRMN-KRDIVSWNTMITGC 713
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 11/222 (4%)
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
R+P W ++ ++ A+ Y M F + A + + L G+
Sbjct: 292 RRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQ 351
Query: 420 LHAHLVK---TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
+HAH+ K P S+V V SLV+MY +CG + A+ F I + +W +++
Sbjct: 352 IHAHVFKFGHAP-PSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCR 410
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV-PTLE 535
++ LF +ML +++ P + T V V AC V G+++ + + +Y + L
Sbjct: 411 FEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSH---VRGGVRLGKQVHAYTLRNGDLR 467
Query: 536 HYT--CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
YT +V + R G +++A+ + D V W ++S+
Sbjct: 468 TYTNNALVTMYARLGRVNDAKALFGVFDGK-DLVSWNTVISS 508
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 204/685 (29%), Positives = 346/685 (50%), Gaps = 65/685 (9%)
Query: 13 TQETLIVSTNKAI----TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES 68
++ +L V N A+ T+CG L AR +FD MP R+V +WN+M+ YS + E+
Sbjct: 189 SEHSLDVFVNTALVNTYTKCG---SLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEA 245
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
+ M + + + TF +IL C +L GK + + ++ +E FVG+ L+
Sbjct: 246 FFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITM 305
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
YA C E+A +VF + + N ++ W+ +I
Sbjct: 306 YARCRSPEDAAQVFGRMKQTN-------------------------------LITWSAII 334
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
+ +A C +AL+ FR M++ G +PN TF S++ E +H L+ + G
Sbjct: 335 TAFADH-GHCGEALRYFRMMQQEG-ILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHG 392
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
+ ++ AL+ Y CE+ D A V+D+LE P L + NS+I + R +DA +F
Sbjct: 393 LDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFR 452
Query: 309 RLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS---------- 354
+ + + +++ +++ G G +++L + S + + ++
Sbjct: 453 TMQQQGIQPDRVNFMTIL-GACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKA 511
Query: 355 --------VIPEMERNPVT-WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
++ EM+ +T WN +I+GY + +AL+ Y ++ AI + TF +
Sbjct: 512 GELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVL 571
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
+AC+ SL +G+++H++ V+ +S+V V +L +MYS+CGS+ +A+ F S+ +
Sbjct: 572 NACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAV 631
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
+W ++ Y+ HG E + L M ++ + N TFV VLS+C AGL+ EG + F S+
Sbjct: 632 SWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSL 691
Query: 526 -KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
G+ EHY C+VDLLGR+G L EAE++I MP+E V W +LL AC +++
Sbjct: 692 GHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDR 751
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
G+ AA K+ LD SA V+LSNIY+ G W +R+ + VKK PG S I++ +
Sbjct: 752 GKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKN 811
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHL 669
+VH F V D ++P IY +E L
Sbjct: 812 KVHEFRVRDTSHPRAAEIYDKVEEL 836
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 164/642 (25%), Positives = 267/642 (41%), Gaps = 97/642 (15%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
+ CG G V A F ++ R VVSWN M+ YS + F E+L+L M V N
Sbjct: 3 SRCGSLGDAVAA---FGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAI 59
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T +L+ C L DG +H L L+ G+ V + LL Y C + +A+ VF+E+
Sbjct: 60 TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 146 HEDNELLWSLMLVGY-VQCNLMSDAFDVFIKM---------------------PKK---- 179
E N + W+ ML Y +Q A ++F +M P
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179
Query: 180 --------------DVVVWTKLISGYAKSVDGCEKALKLFRWM----------------- 208
DV V T L++ Y K A K+F M
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTK-CGSLTDARKVFDGMPCRSVGTWNSMISAYSI 238
Query: 209 -RESGE------NMPNE------YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
SGE M E TF S++ AC GK V + + FE D +
Sbjct: 239 SERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFV 298
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE--- 312
G ALI Y C + + A +V+ R++ L +++I G +A F + +
Sbjct: 299 GTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGI 358
Query: 313 -ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI---------PEMER- 361
N +++ S++ G+ +++ R+ + + TM + + P+ R
Sbjct: 359 LPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDART 418
Query: 362 --------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
N ++WNSMI YVQ H+ ALQL+ TM++ I R F + AC+
Sbjct: 419 VFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSH 478
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
+ +L+H + ++ + V TSLV+MY++ G ++ A+ + + AW L+NG
Sbjct: 479 GRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLING 538
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT 533
Y+ HG EA+ ++ + + I + TF+ VL+AC + + EG I + G+
Sbjct: 539 YALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSD 598
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + ++ + G + A MPI AV W +L A
Sbjct: 599 VIVKNALTNMYSKCGSMENARRIFDSMPIR-SAVSWNGMLQA 639
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 198/411 (48%), Gaps = 27/411 (6%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y +C + DA F K+ ++VV W +IS Y+ S ++AL LF M G PN
Sbjct: 2 YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYS-SYKSFQEALALFHAMLLEGV-APNAI 59
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T +V+ +C +G +VH L ++ GF + + AL+ Y C A V++ +
Sbjct: 60 TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 280 ENPCLNASNSLINGLISMGRI--EDAELIFNRL----TEANSISY----NSMI------K 323
+ N+++ G+ S+ + A +F R+ +AN I++ NS++ K
Sbjct: 120 AEKNVVTWNAML-GVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRK 178
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQ 375
G ++ V +S+ + + ++++ T + + R+ TWNSMIS Y
Sbjct: 179 GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSI 238
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
+ +A ++ M++ R TF + AC +LQ G+ + + +T FE +++V
Sbjct: 239 SERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFV 298
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
GT+L+ MY+RC S DA F + N+ W+A++ ++ HG EA+ F +M ++ I
Sbjct: 299 GTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGI 358
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
+PN TF+ +L+ + E +I + +G+ T +V++ GR
Sbjct: 359 LPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGR 409
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 17/147 (11%)
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MYSRCGS+ DA A+F I + NV +W +++ YS + EA+ LF ML + + PNA T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 502 FVGVLSAC-----VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
V VL++C +R G++ + + R +V T ++++ G+ G L +A+
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVA-----TALLNMYGKCGTLLDAQSV 115
Query: 557 IKDMPIELDAVVWGALLSA------CW 577
++M E + V W A+L CW
Sbjct: 116 FEEMA-EKNVVTWNAMLGVYSLQGCCW 141
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 206/673 (30%), Positives = 355/673 (52%), Gaps = 58/673 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N ++ G+ G L AR +FD MP R +VS+ +++ GYS+ + E++ L M + ++
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV 165
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ F +I+ CA + + GKQ+H V+K +E + +
Sbjct: 166 PDQFAFGSIIKACASSSDVGLGKQLHAQVIK----------------------LESSSHL 203
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-K 200
+ + ++ YV+ N MSDA VF +P KD++ W+ +I+G+++ G E +
Sbjct: 204 IAQ---------NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL--GFEFE 252
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL + M G PNEY F S ++AC+ L G +HGL IK + G +L
Sbjct: 253 ALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLC 312
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSI 316
+ Y C + A RV+D++E P + N +I GL + G ++A +F+++ + ++I
Sbjct: 313 DMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAI 372
Query: 317 SYNSMI----------KGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------VIPEM 359
S S++ +G ++ + L + S++++ T S + +
Sbjct: 373 SLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDF 432
Query: 360 ERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
N V+WN++++ +Q+ + L+L+ M + T L C + SL+ G
Sbjct: 433 RNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLG 492
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+H + +KT ++ L+DMY++CGS+ A+ F S+ + +V +W+ L+ GY+
Sbjct: 493 SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQS 552
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEH 536
G G EA++LF+ M I PN TFVGVL+AC GLV EG+K++ +M++ +G+ PT EH
Sbjct: 553 GFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEH 612
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
+CVVDLL R+G L+EAE FI +M +E D VVW LLSAC N+ + ++AA+ + +D
Sbjct: 613 CSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKID 672
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
+A+V+L +++A G W +R + +VKK PG SWIE+ ++H F ED +
Sbjct: 673 PFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFH 732
Query: 657 PNCNVIYATLEHL 669
P + IY L ++
Sbjct: 733 PERDDIYTVLHNI 745
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 212/507 (41%), Gaps = 99/507 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+++ N I R Q+ A +F +P++ ++SW++++ G+S+ E+LS + M
Sbjct: 203 LIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLS 262
Query: 78 SNV-KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
V NE F + L C+ L G QIH L +KS G L YA C +
Sbjct: 263 FGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLN 322
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+RVFD++ + W++++ G +GYA
Sbjct: 323 SARRVFDQIERPDTASWNVIIAGLAN--------------------------NGYA---- 352
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
++A+ +F MR SG +P+ + S++ A + A +G +H +IK GF D ++
Sbjct: 353 --DEAVSVFSQMRSSG-FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVC 409
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGL--------------------- 294
+L+ Y C +++ N + S N+++
Sbjct: 410 NSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSEC 469
Query: 295 ----ISMGR-----IEDAELIFNRLTEANSISY---------NSMIKGYAVYGQVDDSKR 336
I+MG +E + L S+ N +I YA G + ++R
Sbjct: 470 EPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARR 529
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F+ M +R ++S W+++I GY Q+ E+AL L+ M+ I+
Sbjct: 530 IFDSMDNRDVVS-----------------WSTLIVGYAQSGFGEEALILFKEMKSAGIEP 572
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDA 452
TF + ACS +G +++G L+A + +P + + + +VD+ +R G +N+A
Sbjct: 573 NHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC---SCVVDLLARAGRLNEA 629
Query: 453 QASFSSIS-SPNVAAWTALMNGYSHHG 478
+ + P+V W L++ G
Sbjct: 630 ERFIDEMKLEPDVVVWKTLLSACKTQG 656
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/521 (22%), Positives = 214/521 (41%), Gaps = 60/521 (11%)
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S+ K+ T+ +++ C+ SL G++IH +L S + + + +L Y C + +
Sbjct: 61 SSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD 120
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VFD + E N + ++ ++ GY Q ++A +++KM ++D+V
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV--------------- 165
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
P+++ F S+I+ACA GK +H +IK
Sbjct: 166 ------------------PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQN 207
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING----------------LISMGRIE 301
ALI Y A RV+ + L + +S+I G ++S G
Sbjct: 208 ALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFH 267
Query: 302 DAELIFNRLTEANS----ISYNSMIKGYAVYGQVDDSKRL---FEKMPHRSIISLNTMIS 354
E IF +A S Y S I G + ++ + M R LN+
Sbjct: 268 PNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGF-LNSARR 326
Query: 355 VIPEMER-NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
V ++ER + +WN +I+G N ++A+ ++ MR + L A + +
Sbjct: 327 VFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMA 386
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMN 472
L QG +H++++K F +++ V SL+ MY+ C + F ++ + +W ++
Sbjct: 387 LSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILT 446
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
H E + LF++ML + P+ T +L CV + G ++ G+ P
Sbjct: 447 ACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAP 506
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
++D+ + G L +A M D V W L+
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLI 546
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 120/231 (51%), Gaps = 6/231 (2%)
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR-STFSVL 404
I++ ++++S I E N I+ ++N + +AL+ + +K + + R T+ L
Sbjct: 18 ILATSSVVSTIKTEE----LMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISL 73
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
ACS SL QG+ +H H++ + + + + ++ MY +CGS+ DA+ F + N+
Sbjct: 74 ICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNL 133
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
++T+++ GYS +G G+EA+ L+ ML++D+VP+ F ++ AC + V G ++
Sbjct: 134 VSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQ 193
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ L ++ + R + +A +P++ D + W ++++
Sbjct: 194 VIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK-DLISWSSIIAG 243
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 210/668 (31%), Positives = 335/668 (50%), Gaps = 98/668 (14%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
S++ AI RNGQL AR +FD+ P+ RTV SWN M+ Y + + E+L L M +
Sbjct: 24 SSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQ 83
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
N N LI G + +G+L E
Sbjct: 84 RNT--------------VSWNGLISG----------------HIKNGML---------SE 104
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+RVFD + + N + W+ M+ GYV+ +++A +F MP K+VV WT ++ G +
Sbjct: 105 ARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQE-GR 163
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+ A KLF M E V+ +G +CE G L
Sbjct: 164 VDDARKLFDMMPEK-----------DVVAVTNMIGGYCE----EGRL------------- 195
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
D A ++D + + ++++G G+++ A +F + E N +S
Sbjct: 196 ------------DEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVS 243
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ERNP 363
+ +M+ GY G++ ++ LF+ MP + ++ N MI V M ER+
Sbjct: 244 WTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDN 303
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
TW++MI Y + +AL L+ M++ + + + C L SL G+ +HA
Sbjct: 304 GTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQ 363
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
LV++ F+ ++YV + L+ MY +CG++ A+ F+ +V W +++ GYS HGLG EA
Sbjct: 364 LVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEA 423
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVD 542
+ +F M + P+ TF+GVLSAC +G V EG+++F +MK Y V P +EHY C+VD
Sbjct: 424 LNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVD 483
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISA 602
LLGR+ ++EA + ++ MP+E DA+VWGALL AC M +++ E A +K+ L+ K
Sbjct: 484 LLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 543
Query: 603 YVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED-RNNPNCNV 661
YV+LSN+YA G+W +R+++ V K PGCSWIE+ +VH F+ D + +P +
Sbjct: 544 YVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPI 603
Query: 662 IYATLEHL 669
I LE L
Sbjct: 604 IMKMLEKL 611
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 162/384 (42%), Gaps = 66/384 (17%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N I+ +NG L AR +FD MP R VVSW +M+ GY + E+ L M
Sbjct: 87 VSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHK 146
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS---------GYECFE---------- 119
NV +++ +L Q + D +++ ++ + G C E
Sbjct: 147 NV----VSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALF 202
Query: 120 --------FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
+ ++ YA +++ A+++F+ + E NE+ W+ ML+GY M +A
Sbjct: 203 DEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASS 262
Query: 172 VFIKMPKKDVVVWTKLISGYA--KSVDGCEK----------------------------A 201
+F MP K VVV ++I G+ VD + A
Sbjct: 263 LFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEA 322
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
L LFR M+ G + N + SV+ C L + GK VH L++ F+ D + LI
Sbjct: 323 LGLFRRMQREGLAL-NFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLIT 381
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSIS 317
Y C A +V++R + NS+I G G E+A +F+ + + ++
Sbjct: 382 MYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVT 441
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKM 341
+ ++ + G+V + LFE M
Sbjct: 442 FIGVLSACSYSGKVKEGLELFETM 465
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 152/342 (44%), Gaps = 48/342 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N+ I G NG++ AR +F M R +W+ M+ Y + E+L L M R
Sbjct: 272 VVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQR 331
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ LN + ++LSVC L SL GKQ+H +++S ++ +V S L+ Y C +
Sbjct: 332 EGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVR 391
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AK+VF+ + ++W+ M+ GY Q L +A +VF M
Sbjct: 392 AKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDM--------------------- 430
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL----LIKCGFEFDE 253
C + P++ TF V+ AC+ GKV GL +KC ++ +
Sbjct: 431 CSSGVP------------PDDVTFIGVLSACS-----YSGKVKEGLELFETMKCKYQVEP 473
Query: 254 SIG--GALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRL 310
I L++ + + AM++ +++ P +L+ + +++ AE+ +L
Sbjct: 474 GIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKL 533
Query: 311 TE---ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
+ N+ Y + YA G+ D + L EK+ RS+ L
Sbjct: 534 AQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKL 575
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 207/681 (30%), Positives = 341/681 (50%), Gaps = 66/681 (9%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I+ N I G+ G + AR +FD M + VVSW +M+ GYS+ + ++++ + M R
Sbjct: 194 IILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTR 253
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S ++ TF +++ C + G+Q+H V+KS + + L+ Y N +IE
Sbjct: 254 SGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEH 313
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +VF ++P KD++ W +I+GY +
Sbjct: 314 AS-------------------------------NVFTRIPTKDLISWGTMITGYIQLGYR 342
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E AL LFR + G PNE+ F SV AC+ L GK VHG+ +K G + G
Sbjct: 343 VE-ALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGC 401
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----A 313
+L + Y A + +++NP + + N++I G +A F ++
Sbjct: 402 SLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTP 461
Query: 314 NSISYNSMI----------KGYAVYGQV------------DDSKRLFEKMPHRSIISLNT 351
+SI+Y S++ +G ++ + + ++ K H L+
Sbjct: 462 DSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSH-----LHD 516
Query: 352 MISVIPEMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
++V ++ RN V+WN+++S +Q + +LY M T + L C+
Sbjct: 517 ALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCA 576
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
L SL G +H + +K+ +V V L+DMY++CGS+ A+ F S + ++ +W++
Sbjct: 577 ELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSS 636
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-Y 528
L+ GY+ GLG EA+ LF IM + PN T++G LSAC GLV EG ++++SM++ +
Sbjct: 637 LIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEH 696
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ PT EH++C+VDLL R+G LHEAE FI+ ++ D W LL+AC N+++ ER
Sbjct: 697 GIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERG 756
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A + LD +A V+L NI+A G W + +RK + + V+K PG SWIE+ + H
Sbjct: 757 AGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHI 816
Query: 649 FSVEDRNNPNCNVIYATLEHL 669
F ED ++P N+IY LE L
Sbjct: 817 FFSEDSSHPQRNLIYTMLEEL 837
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 136/561 (24%), Positives = 240/561 (42%), Gaps = 67/561 (11%)
Query: 39 NLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLN 98
NL ++P + + LC + + E+ + SN +T+++++ CA
Sbjct: 119 NLSKELPTNSYI---IFLCKQHHYKEALEAFDF--HLKNSNSHFEPSTYTSLVLACANFR 173
Query: 99 SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLV 158
SL K+IH VLKS Y+ + +L + M+
Sbjct: 174 SLDYAKKIHDHVLKSNYQ-------------------------------PSIILQNHMIN 202
Query: 159 GYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
Y +C M DA VF M +VV WT +ISGY+++ A+ ++ M SG+ P++
Sbjct: 203 MYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQA-NDAIIMYIQMTRSGQ-FPDQ 260
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
TF SVI+AC G G+ +H +IK F + ALI Y + A V+ R
Sbjct: 261 LTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTR 320
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRL- 337
+ L + ++I G I +G +A +F L + N I G +V+ L
Sbjct: 321 IPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFG-SVFSACSSLLELE 379
Query: 338 FEKMPHR---------------SIISLNTMISVIPEME------RNP--VTWNSMISGYV 374
+ K H S+ + +P + +NP V+WN++I+ +
Sbjct: 380 YGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFA 439
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
N +A+ + M + + T+ L C L QG+ +H+++VK F+ +
Sbjct: 440 DNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEIT 499
Query: 435 VGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
V SL+ MY++C ++DA F IS + N+ +W A+++ E L++ M
Sbjct: 500 VCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFS 559
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIF-RSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552
P++ T +L C + G ++ S+KS G++ + ++D+ + G L
Sbjct: 560 GNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKS-GLILDVSVCNGLIDMYAKCGSLKH 618
Query: 553 AEEFIKDMPIELDAVVWGALL 573
A + + D LD V W +L+
Sbjct: 619 ARD-VFDSTQNLDIVSWSSLI 638
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 25/314 (7%)
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS----ISYNSMI 322
EAFD ++ + P + SL+ + ++ A+ I + + ++N I N MI
Sbjct: 144 EAFDFHLKNSNSHFEP--STYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMI 201
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
Y G + D++++F+ M +P N V+W SMISGY QN A
Sbjct: 202 NMYGKCGSMKDARKVFDTMQ-------------LP----NVVSWTSMISGYSQNGQANDA 244
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
+ +Y+ M + + TF + AC G + G+ LHAH++K+ F ++ +L+ M
Sbjct: 245 IIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISM 304
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV-PNAAT 501
Y+ G I A F+ I + ++ +W ++ GY G EA+ LF +L Q PN
Sbjct: 305 YTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFI 364
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
F V SAC + G ++ +G+ + + D+ + G L A+ +
Sbjct: 365 FGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIK 424
Query: 562 IELDAVVWGALLSA 575
D V W A+++A
Sbjct: 425 -NPDIVSWNAIIAA 437
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 220/687 (32%), Positives = 343/687 (49%), Gaps = 74/687 (10%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGY-----SKWAKFDESLSLVSTM 75
+N +T + G L +AR +FD P R +V+WN +L Y S E L L +
Sbjct: 115 SNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLL 174
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
S T + +L +C L + +H +K G E FV L+ Y+
Sbjct: 175 RASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYS----- 229
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
+C M DA +F M ++DVV+W ++ GY +
Sbjct: 230 --------------------------KCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL- 262
Query: 196 DGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGA--FCEGKVVHGLLIKCGFEFD 252
G EK A +LF SG P+E++ ++ C G GK VHG+ +K G + D
Sbjct: 263 -GLEKEAFQLFSEFHRSGLR-PDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSD 320
Query: 253 ESIGGALIEFYC--GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
S+ +L+ Y GC F A V++ +++ L + NS+I+ E++ +F L
Sbjct: 321 VSVANSLVNMYSKMGCAYF--AREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDL 378
Query: 311 TEAN---------SISYNSMIKGYAVYGQVDDSKRLFE---KMPHRSIISLNTMI----- 353
SI+ + K +D K++ K S + +N+ I
Sbjct: 379 LHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYI 438
Query: 354 --------SVIPEMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
++ P V W SMISG V N ++AL++Y MR+ + TF+
Sbjct: 439 KCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFAT 498
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
L A SC+ +L+QG+ LHA+++K S+ +VGTSLVDMY++CG+I DA F ++ N
Sbjct: 499 LIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRN 558
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+A W A++ G + HG EAV LF+ M I P+ +F+G+LSAC AGL +E +
Sbjct: 559 IALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLH 618
Query: 524 SMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
SM + YG+ P +EHY+C+VD LGR+G + EA++ I+ MP + A + ALL AC ++
Sbjct: 619 SMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDV 678
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
E G+R A ++F L+ +AYV+LSNIYA +W D RK + VKKDPG SWI++
Sbjct: 679 ETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDV 738
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHL 669
+ +H F V+DR++P ++IY +E +
Sbjct: 739 KNMLHLFVVDDRSHPQADIIYDKVEEM 765
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 134/567 (23%), Positives = 241/567 (42%), Gaps = 96/567 (16%)
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L ++L+ GK H ++ SG F+ + LL Y+ C + A++VFD
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFD------ 136
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG----CEKALKLF 205
P++D+V W ++ YA SVD ++ L LF
Sbjct: 137 -------------------------TTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLF 171
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
R +R S T V++ C G + VHG IK G E+D + GAL+ Y
Sbjct: 172 RLLRAS-LGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSK 230
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA------------ 313
C A ++D + + N ++ G + +G ++A +F+ +
Sbjct: 231 CGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLI 290
Query: 314 ---------NSISYNSMIKGYAVYGQVDD--------------------SKRLFEKMPHR 344
+ + + G AV +D ++ +F M H
Sbjct: 291 LNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHL 350
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+IS N+MIS + + N I + LHE + T+ + T +
Sbjct: 351 DLISWNSMISSCAQSSLEEESVNLFI-----DLLHEGLKPDHFTLASI-------TLATA 398
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
AC CL L QG+ +HAH +K F+S+++V + ++DMY +CG + +A F+ IS+P+
Sbjct: 399 AKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDD 458
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL--SACVRAGLVNEGMKIF 522
AWT++++G +G +A+ ++ M + ++P+ TF ++ S+CV A + +G ++
Sbjct: 459 VAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTA--LEQGRQLH 516
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
++ V T +VD+ + G++ +A K M + + +W A+L N
Sbjct: 517 ANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNA 575
Query: 583 E--VGERAAQKMFGLDKKPISAYVILS 607
E V + K G++ +S ILS
Sbjct: 576 EEAVNLFKSMKSHGIEPDRVSFIGILS 602
>gi|356541109|ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Glycine max]
Length = 681
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 207/664 (31%), Positives = 349/664 (52%), Gaps = 58/664 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-ESLSLVSTMH 76
+ S N I + L AR LFD R +VS+N++L Y ++ E+L L + M
Sbjct: 49 VFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSLLSAYVGSDGYETEALDLFTRMQ 108
Query: 77 --RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
R + ++E T + +L++ A+L L GKQ+H ++K+ + +F S L+ Y+ C
Sbjct: 109 SARDTIGIDEITLTNMLNLAAKLRVLCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGC 168
Query: 135 IEEAKRVFDELHEDNELL-WSLMLVGYVQCNLMSDAFDVFIKMPK-KDVVVWTKLISGYA 192
+EA +F E +L+ + M+ + M A +VF K P+ KD V W LI+GY+
Sbjct: 169 FQEACNLFGSCDEMVDLVSKNAMVAACCREGKMDMALNVFWKNPELKDTVSWNTLIAGYS 228
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
++ EK+L F M E+G + NE+T SV+ AC+ L GK VH ++K G+ +
Sbjct: 229 QN-GYMEKSLTFFVEMIENGIDF-NEHTLASVLNACSALKCSKLGKSVHAWVLKKGYSSN 286
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+ I +++FY C G I AEL++ ++
Sbjct: 287 QFISSGVVDFYSKC-------------------------------GNIRYAELVYAKIGI 315
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
+ + S+I Y+ G + +++RLF+ + +ERN V W ++ SG
Sbjct: 316 KSPFAVASLIAAYSSQGNMTEAQRLFDSL-----------------LERNSVVWTALCSG 358
Query: 373 YVQNNLHEKALQLYMTMR-KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
YV++ E +L+ R K A+ + AC+ L G+ +HA++++ F+
Sbjct: 359 YVKSQQCEAVFKLFREFRTKEALVPDAMIIVSILGACAIQADLSLGKQIHAYILRMRFKV 418
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA--WTALMNGYSHHGLGSEAVLLFEI 489
+ + +SLVDMYS+CG++ A+ F ++ + A + ++ GY+HHG ++A+ LF+
Sbjct: 419 DKKLLSSLVDMYSKCGNVAYAEKLFRLVTDSDRDAILYNVIIAGYAHHGFENKAIELFQE 478
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
ML + + P+A TFV +LSAC GLV G + F SM+ Y V+P + HY C+VD+ GR+
Sbjct: 479 MLNKSVKPDAVTFVALLSACRHRGLVELGEQFFMSMEHYNVLPEIYHYACMVDMYGRANQ 538
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
L +A EF++ +PI++DA +WGA L+AC + + ++A +++ ++ S YV L+N
Sbjct: 539 LEKAVEFMRKIPIKIDATIWGAFLNACQMSSDAALVKQAEEELLKVEADNGSRYVQLANA 598
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
YA GKW + IRK++ E KK GCSWI + + +H F+ DR++ +Y+TL L
Sbjct: 599 YAAKGKWDEMGRIRKKMRGHEAKKLAGCSWIYVENGIHVFTSGDRSHSKAEAVYSTLTCL 658
Query: 670 TANL 673
L
Sbjct: 659 NGKL 662
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 131/547 (23%), Positives = 248/547 (45%), Gaps = 82/547 (14%)
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H +KSG F + L+ Y+N ++EA ++FDE+ N W+ +++ Y++ + +
Sbjct: 6 HVQAIKSGLVSSIFTCNQLIHLYSNHGLLQEAHKLFDEMPHPNVFSWNAIIMAYIKAHNL 65
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMP-NEYTFDSV 224
+ A +F +D+V + L+S Y S DG E +AL LF M+ + + + +E T ++
Sbjct: 66 TQARALFDSASHRDLVSYNSLLSAYVGS-DGYETEALDLFTRMQSARDTIGIDEITLTNM 124
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC- 283
+ A+L C GK +H ++K + + +LI+ Y C F A ++ +
Sbjct: 125 LNLAAKLRVLCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGCFQEACNLFGSCDEMVD 184
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTE-ANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
L + N+++ G+++ A +F + E +++S+N++I GY+ G ++ S F +M
Sbjct: 185 LVSKNAMVAACCREGKMDMALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSLTFFVEM- 243
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
++N ID T +
Sbjct: 244 -------------------------------IEN----------------GIDFNEHTLA 256
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ +ACS L + G+ +HA ++K + SN ++ + +VD YS+CG+I A+ ++ I
Sbjct: 257 SVLNACSALKCSKLGKSVHAWVLKKGYSSNQFISSGVVDFYSKCGNIRYAELVYAKIGIK 316
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
+ A +L+ YS G +EA LF+ +LE+ N+ + + S V++ K+F
Sbjct: 317 SPFAVASLIAAYSSQGNMTEAQRLFDSLLER----NSVVWTALCSGYVKSQQCEAVFKLF 372
Query: 523 RSMKSYG--------VVPTLEHYTCVVDL-LGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
R ++ +V L DL LG+ H +I M ++D + +L+
Sbjct: 373 REFRTKEALVPDAMIIVSILGACAIQADLSLGKQIH-----AYILRMRFKVDKKLLSSLV 427
Query: 574 SACWFWMNMEVGERA-AQKMFGL----DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
M + G A A+K+F L D+ I VI++ YA G K +++ + + +
Sbjct: 428 D-----MYSKCGNVAYAEKLFRLVTDSDRDAILYNVIIAG-YAHHGFENKAIELFQEMLN 481
Query: 629 LEVKKDP 635
VK D
Sbjct: 482 KSVKPDA 488
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/563 (33%), Positives = 328/563 (58%), Gaps = 37/563 (6%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM-PKKDVVVWTKLISGYA 192
EI+ A++VF+E+ E + LW+ M+ GY++C ++ +A +F + KK+VV WT +++GY
Sbjct: 16 EIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVNGYI 75
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
K + ++A +LF M + N ++++++ AR G + + + +
Sbjct: 76 K-FNQVKEAERLFYEM-----PLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSW 129
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+I AL++ C + A R++D++++ + + +++ GL GR+EDA +F+++
Sbjct: 130 NTIITALVQ----CGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMPV 185
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEM 359
N +S+N+MI GYA ++D++ +LF++MP R + S NTMI+ + EM
Sbjct: 186 RNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEM 245
Query: 360 -ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR---STFSVLFHACSCLGSLQ 415
E+N +TW +M++GYVQ+ L E+AL++++ M LA + + TF + ACS L L
Sbjct: 246 QEKNVITWTAMMTGYVQHGLSEEALRVFIKM--LATNELKPNTGTFVTVLGACSDLAGLT 303
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS--ISSPNVAAWTALMNG 473
+GQ +H + KT F+ + V ++L++MYS+CG ++ A+ F +S ++ +W ++
Sbjct: 304 EGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAA 363
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVVP 532
Y+HHG G EA+ LF M E + N TFVG+L+AC GLV EG K F +K+ +
Sbjct: 364 YAHHGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQL 423
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+HY C+VDL GR+G L EA I+ + E+ VWGALL+ C N ++G+ A+K+
Sbjct: 424 REDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKI 483
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
++ + Y +LSN+YA +GKW + ++R R+ + +KK PGCSWIE+ + V F V
Sbjct: 484 LKIEPQNAGTYSLLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWIEVGNTVQVFVVG 543
Query: 653 DRNNPNCNVIYATLEHLTANLNS 675
D+ + Y L HL +L++
Sbjct: 544 DKPHSQ----YEPLGHLLHDLHT 562
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 121/518 (23%), Positives = 216/518 (41%), Gaps = 95/518 (18%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS N + RNG A +LF +MP R VVSWNT++ + + +++ L M
Sbjct: 95 VVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQMKD 154
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+V +++T+++ A+ + D + + + + + +G YA ++E
Sbjct: 155 RDV----VSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITG----YAQNRRLDE 206
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A ++F + E + W+ M+ G++Q ++ A +F +M +K+V+ WT +++GY +
Sbjct: 207 ALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQH-GL 265
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E+AL++F M + E PN TF +V+ AC+ L EG+ +H ++ K F+ +
Sbjct: 266 SEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVS 325
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
ALI Y C A +++D +GL+S + + IS
Sbjct: 326 ALINMYSKCGELHTARKMFD--------------DGLLS---------------QRDLIS 356
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+N MI YA +G ++ LF +M + + N VT
Sbjct: 357 WNGMIAAYAHHGYGKEAINLFNEMQELGVCA-------------NDVT------------ 391
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT---PFESNVY 434
F L ACS G +++G ++K + Y
Sbjct: 392 -----------------------FVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHY 428
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
LVD+ R G + +A + + W AL+ G + HG L+ E +L+
Sbjct: 429 --ACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILK- 485
Query: 494 DIVP-NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
I P NA T+ + + G E + MK G+
Sbjct: 486 -IEPQNAGTYSLLSNMYASVGKWKEAANVRMRMKDMGL 522
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
R G I+ A+ F + ++ WT ++ GY G+ EA LF+ D N T+
Sbjct: 13 REGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFD---RWDAKKNVVTWTA 69
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
+++ ++ V E ++F M VV + +VD R+G +A + + MP E
Sbjct: 70 MVNGYIKFNQVKEAERLFYEMPLRNVVS----WNTMVDGYARNGLTQQALDLFRRMP-ER 124
Query: 565 DAVVWGALLSACWFWMNMEVGE-RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
+ V W +++A ++ G AQ++F D+ V + + A L K G+ D R
Sbjct: 125 NVVSWNTIITAL-----VQCGRIEDAQRLF--DQMKDRDVVSWTTMVAGLAKNGRVEDAR 177
Query: 624 KRLTHLEVK 632
+ V+
Sbjct: 178 ALFDQMPVR 186
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/674 (31%), Positives = 348/674 (51%), Gaps = 62/674 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFS 88
R G LV A +F +M R + SWN ++ GY+K FDE++ L M VK + TF
Sbjct: 141 RFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFP 200
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L C + L G+++H V++ GYE V + L+ Y C +++ A+ +FD
Sbjct: 201 CVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD----- 255
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+MP++D++ W +ISGY ++ G E LKLF M
Sbjct: 256 --------------------------RMPRRDIISWNAMISGYFENGMGHE-GLKLFFAM 288
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
R + P+ T SVI AC LG G+ +H +I GF D S+ +L + Y +
Sbjct: 289 RGLSVD-PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGS 347
Query: 269 FDGAMRVYDRLENPCLNASNSLING----LISMGRIEDAELIFNRLTEANSISYNSMIKG 324
+ A +++ R++ + + ++I+G + I+ ++ + + I+ +++
Sbjct: 348 WREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSA 407
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISL----NTMISV----------------IPEMERNPV 364
A G +D L + +IS N +I++ IP +N +
Sbjct: 408 CATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR--KNVI 465
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+W S+I+G NN +AL + M K+ + T + AC+ +G+L G+ +HAH+
Sbjct: 466 SWTSIIAGLRLNNRCFEALIFFRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHV 524
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
++T + ++ +L+DMY RCG +N A F+S +V++W L+ GYS G GS V
Sbjct: 525 LRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVV 583
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
LF+ M++ + P+ TF+ +L C ++ +V +G+ F M+ YGV P L+HY CVVDLL
Sbjct: 584 ELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACVVDLL 643
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L EA +FI+ MP+ D VWGALL+AC N+++GE +AQ++F LDK + Y+
Sbjct: 644 GRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYI 703
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+L N+YA GKW + +R+ + + D GCSW+E+ +VHAF +D+ +P I
Sbjct: 704 LLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINT 763
Query: 665 TLEHLTANLNSVVL 678
L+ ++ V L
Sbjct: 764 VLDGFYEKMSEVGL 777
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 218/507 (42%), Gaps = 89/507 (17%)
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
K +E++ L+++M V ++E F ++ +C + +G +++ + L S
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSS--------- 123
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
N +E L + L +V+ + DA+ VF KM ++++
Sbjct: 124 -------MNSLSVE---------------LGNAFLAMFVRFGNLVDAWYVFGKMSERNLF 161
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W L+ GYAK ++A+ L+ M G P+ YTF V+R C + G+ VH
Sbjct: 162 SWNVLVGGYAKQ-GYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHV 220
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR--- 299
+++ G+E D + ALI Y C A ++DR+ + + N++I+G G
Sbjct: 221 HVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHE 280
Query: 300 -----------------------IEDAELIFNRLTEANSISY-------------NSMIK 323
I EL+ +R + +Y NS+ +
Sbjct: 281 GLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQ 340
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
Y G ++++LF +M + I+S W +MISGY N L EKA+
Sbjct: 341 MYLYAGSWREAEKLFSRMDCKDIVS-----------------WTTMISGYEYNFLPEKAI 383
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
Y M + ++ T + + AC+ LG L G LH +K S V V +L++MY
Sbjct: 384 DTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMY 443
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
S+C I+ A F +I NV +WT+++ G + EA++ F M + + PNA T
Sbjct: 444 SKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQM-KMTLQPNAITLT 502
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGV 530
L+AC R G + G +I + GV
Sbjct: 503 AALAACARIGALMCGKEIHAHVLRTGV 529
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 123/541 (22%), Positives = 218/541 (40%), Gaps = 63/541 (11%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E I N IT + G + +AR LFD+MP R ++SWN M+ GY + E L L
Sbjct: 228 ELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFA 287
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M +V + T ++++S C L G+ IH V+ +G+ V + L Y
Sbjct: 288 MRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGS 347
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
EA+++F + + + W+ M+ GY + N +
Sbjct: 348 WREAEKLFSRMDCKDIVSWTTMISGY-EYNFLP--------------------------- 379
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
EKA+ +R M + P+E T +V+ ACA LG G +H L IK
Sbjct: 380 ----EKAIDTYRMMDQDSVK-PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT--- 311
+ LI Y C+ D A+ ++ + + + S+I GL R +A + F ++
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMTL 494
Query: 312 ----------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS-------LNTMIS 354
A +++ G ++ V + + +++ +N +
Sbjct: 495 QPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWN 554
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+++ +WN +++GY + ++L+ M K + TF L C +
Sbjct: 555 QFNSQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMV 614
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG 473
+QG + + + + N+ +VD+ R G + +A + +P+ A W AL+N
Sbjct: 615 RQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674
Query: 474 YS-HHG--LGS-EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
HH LG A +FE L++ V + + C G E K+ R MK G
Sbjct: 675 CRIHHNIDLGELSAQRIFE--LDKGSVGYYILLCNLYADC---GKWREVAKVRRMMKENG 729
Query: 530 V 530
+
Sbjct: 730 L 730
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 22/270 (8%)
Query: 310 LTEANSISY---NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
L+ NS+S N+ + + +G + D+ +F KM ERN +W
Sbjct: 121 LSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMS-----------------ERNLFSW 163
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
N ++ GY + ++A+ LY M + + TF + C + L +G+ +H H+V
Sbjct: 164 NVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVV 223
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ +E ++ V +L+ MY +CG + A+ F + ++ +W A+++GY +G+G E +
Sbjct: 224 RYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLK 283
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
LF M + P+ T V+SAC G G I + + G + + +
Sbjct: 284 LFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL 343
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+G EAE+ M + D V W ++S
Sbjct: 344 YAGSWREAEKLFSRMDCK-DIVSWTTMISG 372
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ G N E+A++L +M++L + F L C + ++G +++ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+V +G + + M+ R G++ DA F +S N+ +W L+ GY+ G EA+ L+
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185
Query: 490 ML-EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548
ML + P+ TF VL C + G ++ + YG ++ ++ + + G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSA 575
+ A MP D + W A++S
Sbjct: 246 DVKSARLLFDRMP-RRDIISWNAMISG 271
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/682 (30%), Positives = 333/682 (48%), Gaps = 90/682 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR+ FD +P R V WN M+ G K D ++ L M S + N T + L
Sbjct: 190 GLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFL 249
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
SVCA L+ G Q+H L +K G E V + LL YA C +++A R+F+ + +D+ +
Sbjct: 250 SVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLV 309
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ G VQ L +AF +F M+ S
Sbjct: 310 TWNGMISGCVQNGLFVEAFGLFYD--------------------------------MQRS 337
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+ T S++ A L +GK VHG +++ D + AL++ Y C
Sbjct: 338 GAR-PDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRM 396
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKG--- 324
A +YD + +++I+G + G E+A +F L E N+++ S++ G
Sbjct: 397 AQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCAS 456
Query: 325 --------------------------------YAVYGQVDDSKRLFEKMPHRSIISLNTM 352
YA G++D S +F KM
Sbjct: 457 MAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMS---------- 506
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
+++ VTWNSMIS + QN ++AL L+ M I T S AC+ L
Sbjct: 507 -------QKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLP 559
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
++ G+ +H +K P +++++ ++L+DMY++CG++ A F + N +W ++++
Sbjct: 560 AIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIIS 619
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVV 531
Y HGL E+V L M E+ P+ TF+ ++SAC AGLV EG+++F+ M K Y +
Sbjct: 620 AYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIA 679
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P +EH+ C+VDL RSG L +A +FI DMP + DA +WGALL AC N+E+ + A+Q+
Sbjct: 680 PRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQE 739
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+F LD YV++SNI AV G+W +R+ + ++ K PG SW+++N+ H F
Sbjct: 740 LFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVA 799
Query: 652 EDRNNPNCNVIYATLEHLTANL 673
D+++P IY +L+ L L
Sbjct: 800 SDKSHPESEDIYTSLKTLLQEL 821
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 136/579 (23%), Positives = 247/579 (42%), Gaps = 71/579 (12%)
Query: 32 GQLVTARN------LFDQMPIRTVVS---WNTMLCGYSKWAKFDESLSLVSTM--HRSNV 80
G V AR +F +P S WN ++ G++ + ++ M H +
Sbjct: 78 GMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAP 137
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ T ++ CA L ++ G+ +H G +VGS L+ YA+ + A+
Sbjct: 138 SPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARD 197
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
FD + E + +LW++M+ G ++ A VDG
Sbjct: 198 AFDGIPERDCVLWNVMMDGCIK-----------------------------AGDVDG--- 225
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
A++LFR MR SG PN T + CA G +H L +KCG E + ++ L+
Sbjct: 226 AVRLFRNMRASGCE-PNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLL 284
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF------------- 307
Y C+ D A R+++ + L N +I+G + G +A +F
Sbjct: 285 AMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSI 344
Query: 308 ------NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH-----RSIISLNTMISVI 356
LT+ N + + GY V V+ L + R + +
Sbjct: 345 TLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAA 404
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
++ V ++MISGYV N + E+ALQ++ + + I T + + C+ + +L
Sbjct: 405 RAIDV--VIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPL 462
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
GQ +H ++++ +E YV ++L+DMY++CG ++ + F +S + W ++++ +S
Sbjct: 463 GQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQ 522
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
+G EA+ LF M + I N T LSAC + G +I + +
Sbjct: 523 NGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFA 582
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ ++D+ + G+L A + MP + + V W +++SA
Sbjct: 583 ESALIDMYAKCGNLELALRVFEFMP-DKNEVSWNSIISA 620
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 131/545 (24%), Positives = 222/545 (40%), Gaps = 72/545 (13%)
Query: 75 MHRSNVKLNETTF-STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+ RS +KL F ST S A + + ++ L + G + GL
Sbjct: 3 LARSGLKLPPRPFCSTTFSATAAVTDVSSADRL--LAVLRGCVSAPHLPLGL-------- 52
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVG-YVQCNLMSDAFDVFIKMPKKDV---VVWTKLIS 189
+I V L + N L L+G YV DA VF +P+ + W LI
Sbjct: 53 QIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIR 112
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
G+ + L + P+ +T V+++CA LGA G++VH G
Sbjct: 113 GFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGL 172
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
D +G AL++ Y A +D + N +++G I G ++ A +F
Sbjct: 173 ANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRN 232
Query: 310 L--------------------TEANSIS-------------------YNSMIKGYAVYGQ 330
+ T+A+ +S N+++ YA
Sbjct: 233 MRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQC 292
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+DD+ RLFE MP + VTWN MISG VQN L +A L+ M+
Sbjct: 293 LDDAWRLFELMPQDDL-----------------VTWNGMISGCVQNGLFVEAFGLFYDMQ 335
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+ T L A + L L+QG+ +H ++V+ +V++ ++LVD+Y +C +
Sbjct: 336 RSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVR 395
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
AQ + + + +V + +++GY +G+ EA+ +F +LEQ I PNA T VL C
Sbjct: 396 MAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCA 455
Query: 511 RAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
+ G +I + + ++D+ + G L + M + D V W
Sbjct: 456 SMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMS-QKDEVTWN 514
Query: 571 ALLSA 575
+++S+
Sbjct: 515 SMISS 519
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 119/281 (42%), Gaps = 18/281 (6%)
Query: 299 RIEDAELIFNRLTEANSISYNSMIKG-YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
+I ++ L++ N ++ ++ + G Y + + D+ +F +P + S
Sbjct: 53 QIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAAS--------- 103
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTM--RKLAIDRTRSTFSVLFHACSCLGSLQ 415
+ WN +I G+ H A+ Y+ M A T + +C+ LG++
Sbjct: 104 -----SLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMS 158
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G+L+H ++VYVG++LV MY+ G + +A+ +F I + W +M+G
Sbjct: 159 LGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCI 218
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
G AV LF M PN AT LS C + G ++ G+ P +
Sbjct: 219 KAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVA 278
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
++ + + L +A + MP + D V W ++S C
Sbjct: 279 VANTLLAMYAKCQCLDDAWRLFELMPQD-DLVTWNGMISGC 318
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 199/589 (33%), Positives = 319/589 (54%), Gaps = 52/589 (8%)
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++L +LN +I QIH L++K+ + FV + LL +R+F
Sbjct: 8 SLLQNATKLNQII---QIHALIIKTSLDGNNFVLAKLL------------RRLF-ACSSA 51
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N+LL+ A VF ++P D +W +I Y S + ++++ LF M
Sbjct: 52 NDLLY---------------ARSVFDEIPSPDTFIWNTMIRAYLNSQNP-QESMSLFFQM 95
Query: 209 RESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
R E +P + Y+ VI+AC RL G+ +H ++K G D + ALIE Y
Sbjct: 96 RHQ-ECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFG 154
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAV 327
+ A + D + +P L N L+ + +G I A +F+R+ E + +S+N+MI G+A
Sbjct: 155 DIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHAS 214
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V +K+LF++ R +IS W+SMI+ Y + +AL+L+
Sbjct: 215 LGDVGTAKKLFDRTCERDLIS-----------------WSSMIAAYAKARQSNEALRLFH 257
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
M+ + + T + AC +G+L G+++H + + E ++ +GTSLVDMY++CG
Sbjct: 258 EMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCG 317
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
I+++ F+ +++ +V AW+A++ G ++HG G A+ F M+ +DI PN TF+GVLS
Sbjct: 318 DIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLS 377
Query: 508 ACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
AC GLV+EG F SM K Y V P +EHY CVVD+LGR+G L EA E IK MP DA
Sbjct: 378 ACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDA 437
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
+VW ALL AC + N+E+ E A + L+ YV+LSNIY+ +W K +++R+ +
Sbjct: 438 IVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMM 497
Query: 627 THLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
++ ++K PG S IE+++ VH F D+++P I L +TA L +
Sbjct: 498 KNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKA 546
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 172/349 (49%), Gaps = 36/349 (10%)
Query: 28 CGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETT 86
C L+ AR++FD++P WNTM+ Y ES+SL M H+ + ++ +
Sbjct: 48 CSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYS 107
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
S ++ C +L +G+++H VLK G FV + L+ YA +IE A+ + DE+
Sbjct: 108 LSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMA 167
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD---------- 196
+ + ++++L YV+ ++ A D+F +MP++D+V W +I G+A D
Sbjct: 168 HPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDR 227
Query: 197 GCEK--------------------ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
CE+ AL+LF M + +P++ T SV+ AC +GA
Sbjct: 228 TCERDLISWSSMIAAYAKARQSNEALRLFHEM-QLANVLPDKVTMVSVLSACGDVGALGM 286
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
GK++H + + E D +G +L++ Y C D ++RV++ + N + A +++I GL +
Sbjct: 287 GKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLAN 346
Query: 297 MGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
G E A F+++ + N +++ ++ + G VD+ F M
Sbjct: 347 HGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSM 395
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 33/223 (14%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS N I G + TA+ LFD+ R ++SW++M+ Y+K + +E+L L
Sbjct: 199 ERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHE 258
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M +NV ++ T ++LS C + +L GK IH + ++ E +G+ L+ YA C +
Sbjct: 259 MQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGD 318
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I+ + RVF+ ++ + WS M++G A D F KM +D+
Sbjct: 319 IDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDI------------- 365
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
PN+ TF V+ AC+ +G EG
Sbjct: 366 --------------------KPNDVTFIGVLSACSHIGLVDEG 388
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 221/696 (31%), Positives = 361/696 (51%), Gaps = 63/696 (9%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPI-RTVVSWNTMLCGY 59
++++A T ++ + + N + G G + AR +FD+ R VSWN M+ +
Sbjct: 120 VQVHAVAVSTGLSGDIFV--ANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAF 177
Query: 60 SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
K + +++ L M S V+ NE FS +++ C L G+++H +V+++GY+
Sbjct: 178 VKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDV 237
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
F + L+ Y+ +I A VF K+PK
Sbjct: 238 FTANALVDMYSKLGDIHMAALVFG-------------------------------KVPKT 266
Query: 180 DVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIR--ACARLGAFCE 236
DVV W ISG + G ++ AL+L M+ SG +PN +T S+++ A A GAF
Sbjct: 267 DVVSWNAFISGCV--LHGHDQHALELLLQMKSSGL-VPNVFTLSSILKACAGAGAGAFAL 323
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
G+ +HG +IK + D+ IG AL++ Y D A +V++ + L N+LI+G
Sbjct: 324 GRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSH 383
Query: 297 MGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS---- 348
G ++ +F R+ ++ N + +++K A + D+ ++ +S
Sbjct: 384 GGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHV 443
Query: 349 LNTMIS-------------VIPEMER-NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+N +I V E N + + SMI+ Q + E A++L+M M + +
Sbjct: 444 VNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGL 503
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ S L +AC+ L + +QG+ +HAHL+K F ++V+ G +LV Y++CGSI DA
Sbjct: 504 EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADL 563
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
+FS + V +W+A++ G + HG G A+ +F M+++ I PN T VL AC AGL
Sbjct: 564 AFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGL 623
Query: 515 VNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V+E F SMK +G+ T EHY+C++DLLGR+G L +A E + MP E +A VWGALL
Sbjct: 624 VDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALL 683
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
+A + E+G+ AA+K+F L+ + +V+L+N YA G W + +RK + +VKK
Sbjct: 684 AASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKK 743
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+P SW+EL RVH F V D+++P IYA LE L
Sbjct: 744 EPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEEL 779
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 135/580 (23%), Positives = 246/580 (42%), Gaps = 96/580 (16%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+AR +FD+ P VSW++++ YS A E+L+ M V+ NE +L CA
Sbjct: 55 SARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CA 113
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED-NELLWS 154
L G Q+H + + +G FV + L+ Y ++EA+RVFDE D N + W+
Sbjct: 114 PDAGL--GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWN 171
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN 214
M+ +V+ + SDA ++F +M VW+ +
Sbjct: 172 GMMSAFVKNDRCSDAVELFGEM------VWSGV--------------------------- 198
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
PNE+ F V+ AC G+ VH ++++ G++ D AL++ Y A
Sbjct: 199 RPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAAL 258
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEA---NSISYNSMIKG------ 324
V+ ++ + + N+ I+G + G + A EL+ + N + +S++K
Sbjct: 259 VFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGA 318
Query: 325 -------------------------------YAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
YA YG +DD++++FE +P + ++
Sbjct: 319 GAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLL------ 372
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
WN++ISG H ++L L+ MRK D R+T + + + + L +
Sbjct: 373 -----------LWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEA 421
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
+ +HA K F S+ +V L+D Y +C + A F SS N+ A+T+++
Sbjct: 422 ISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITA 481
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT 533
S G +A+ LF ML + + P+ +L+AC +G ++ + +
Sbjct: 482 LSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTD 541
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ +V + G + +A+ +P + V W A++
Sbjct: 542 VFAGNALVYTYAKCGSIEDADLAFSGLP-DKGVVSWSAMI 580
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 189/450 (42%), Gaps = 67/450 (14%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+ S +L+ A SL G IH +LKSG LL + N
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSG----------LLHAFRN-------------- 41
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+L Y +C L A VF + P V W+ L++ Y+ + E AL F
Sbjct: 42 ---------HLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPRE-ALAAF 91
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
R MR G NE+ V++ G G VH + + G D + AL+ Y G
Sbjct: 92 RAMRARGVRC-NEFALPIVLKCAPDAGL---GVQVHAVAVSTGLSGDIFVANALVAMYGG 147
Query: 266 CEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRL----TEANSISYNS 320
D A RV+D S N +++ + R DA +F + N ++
Sbjct: 148 FGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSC 207
Query: 321 MIKGYAVYGQVD-DSKRLFEKMPHRS-----IISLNTMISVIPEM--------------E 360
++ A G D ++ R M R+ + + N ++ + ++ +
Sbjct: 208 VVN--ACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPK 265
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH--ACSCLGSLQQGQ 418
+ V+WN+ ISG V + + AL+L + M+ + T S + A + G+ G+
Sbjct: 266 TDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGR 325
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H ++K +S+ Y+G +LVDMY++ G ++DA+ F I ++ W AL++G SH G
Sbjct: 326 QIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGG 385
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
E++ LF M ++ N T VL +
Sbjct: 386 CHGESLSLFCRMRKEGSDINRTTLAAVLKS 415
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
R+ + S L + SL G +HAHL+K+ L+ YS+C A+
Sbjct: 2 RSPESISPLLTRYAATQSLFLGAHIHAHLLKSGLLHAFR--NHLLSFYSKCRLPGSARRV 59
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F P +W++L+ YS++ L EA+ F M + + N VL AGL
Sbjct: 60 FDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL- 118
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G+++ S G+ + +V + G G + EA + + +AV W ++SA
Sbjct: 119 --GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSA 176
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 221/675 (32%), Positives = 342/675 (50%), Gaps = 83/675 (12%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
+L +A LFD+MP+R VSWNTM+ G+ + S ++ M +L+ TF ++L
Sbjct: 48 ELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLK 107
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
A G+Q+H +++K GY + GS LL YA C ++E
Sbjct: 108 GIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE---------------- 151
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
DA+ F+ + K + V W +I+GYA++ D E A L M + G
Sbjct: 152 ---------------DAYLSFLSISKHNTVSWNAMINGYAQAGDR-ETAFWLLDCMEQEG 195
Query: 213 ENMPNEYTFDSVIRACARLGAFCE-GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
E + ++ T+ ++ FC +HG +IK G E ++ ALI Y C + D
Sbjct: 196 EKV-DDGTYAPLLPLLDD-ADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDD 253
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA-------ELIFNRLT-------EANSIS 317
A R++D S++ I L++ + A +L F L E + S
Sbjct: 254 AKRIFD---------SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYS 304
Query: 318 YNSMI----------KGYAVYGQVDDSKRLFEK-MPHRSII----------SLNTMISVI 356
Y S+I G +++G V KR FE+ +P + + S+ + +
Sbjct: 305 YTSIISACFNENISNNGRSLHGLV--IKRGFEQSVPISNALISMYLKSDYGSMKEALCIF 362
Query: 357 PEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
+E ++ V+WNS+++G Q E A++ ++ MR A+D +FS + +CS L + Q
Sbjct: 363 ESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQ 422
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
GQ +H +K ESN +V +SL+ MYS+CG I DA+ SF S + W ALM GY+
Sbjct: 423 LGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYA 482
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTL 534
HG + A+ LF +M E+ + + TFV VL+AC GLV +G K R M+S YGV P +
Sbjct: 483 QHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRM 542
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY C VDL GRSG L EA+ I++MP + D VW L AC N+E+ + A +
Sbjct: 543 EHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLE 602
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
++ + YV+LSN+Y L +W +K +++ + VKK PG SWIE+N+ VHAF +D
Sbjct: 603 MEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDH 662
Query: 655 NNPNCNVIYATLEHL 669
++P+C IY LE L
Sbjct: 663 SHPSCQQIYFLLEVL 677
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 201/461 (43%), Gaps = 65/461 (14%)
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
+L GY +C + A +F +MP +D V W +I+G+ + E + + R MR G +
Sbjct: 39 ILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHI-NCGNLEASWDVLRCMRSCGFEL 97
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+ YTF S+++ A G F G+ VH ++IK G+ + G AL++ Y CE + A
Sbjct: 98 -DRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLS 156
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDA-------------------------------- 303
+ + + N++ING G E A
Sbjct: 157 FLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFC 216
Query: 304 --------ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
++I + L N++ N++I Y+ G +DD+KR+F+
Sbjct: 217 NLTSQLHGKIIKHGLELVNTMC-NALITSYSKCGSLDDAKRIFDSSAGI----------- 264
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
R+ VTWNS+++ Y+ + + A +L + M++ + +++ + AC
Sbjct: 265 -----RDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISN 319
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMY--SRCGSINDAQASFSSISSPNVAAWTALMNG 473
G+ LH ++K FE +V + +L+ MY S GS+ +A F S+ + +W +++ G
Sbjct: 320 NGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTG 379
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT 533
S G +AV F M + + +F VL +C G +I YG+
Sbjct: 380 LSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESN 439
Query: 534 LEHYTCVVDLLGRSGHLHEA----EEFIKDMPIELDAVVWG 570
+ ++ + + G + +A EE K+ I +A+++G
Sbjct: 440 EFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFG 480
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 17/265 (6%)
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
T A+ + N+++ GY ++ + LF++MP R + V+WN+MI
Sbjct: 29 TIADVYTCNNILNGYWKCKELRSADVLFDEMPMR-----------------DSVSWNTMI 71
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
+G++ E + + MR + R TF + + G GQ +H+ ++K +
Sbjct: 72 AGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYA 131
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
NVY G++L+DMY++C + DA SF SIS N +W A++NGY+ G A L + M
Sbjct: 132 ENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCM 191
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
++ + T+ +L A N ++ + +G+ ++ + G L
Sbjct: 192 EQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSL 251
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
+A+ D V W +LL+A
Sbjct: 252 DDAKRIFDSSAGIRDLVTWNSLLAA 276
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 184/438 (42%), Gaps = 88/438 (20%)
Query: 22 NKAITECGRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N IT + G L A+ +FD IR +V+WN++L Y ++ D + L+ M
Sbjct: 239 NALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGF 298
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY--ANCFEIEEA 138
+ + ++++I+S C N +G+ +H LV+K G+E + + L+ Y ++ ++EA
Sbjct: 299 EPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEA 358
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+F+ L + + W+ +L G Q
Sbjct: 359 LCIFESLEFKDRVSWNSILTGLSQ--------------------------------TGSS 386
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
E A+K F MR + ++ + Y+F +V+R+C+ L F G+ +H L +K G E +E + +
Sbjct: 387 EDAVKSFLHMRSAAMDI-DHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSS 445
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
LI Y C G IEDA F ++ +SI++
Sbjct: 446 LIFMYSKC-------------------------------GIIEDARRSFEEASKNSSITW 474
Query: 319 NSMIKGYAVYGQVDDSKRLF-------EKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
N+++ GYA +GQ + + LF KM H + +++ T S I +E+ M S
Sbjct: 475 NALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMES 534
Query: 372 GY-VQNNLHEKALQLYMTMRKLAIDRTR------------STFSVLFHACSCLGSLQQGQ 418
Y V + A + + R ++ + + + AC G+++
Sbjct: 535 DYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELAC 594
Query: 419 LLHAHLVK-TPFESNVYV 435
+ HL++ P E YV
Sbjct: 595 QVAGHLLEMEPEEHCTYV 612
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 6/186 (3%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR F++ + ++WN ++ GY++ + + +L L M VK++ TF +L
Sbjct: 454 GIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVL 513
Query: 92 SVCAQLNSLIDG-KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL-HEDN 149
+ C+ + + G K + C+ G + + Y +EEAK + +E+ + +
Sbjct: 514 TACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPD 573
Query: 150 ELLWSLMLVGYVQCNLMSDAFDV---FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+W L C + A V ++M ++ + L + Y + EKA K+ R
Sbjct: 574 TTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKA-KVKR 632
Query: 207 WMRESG 212
M+E G
Sbjct: 633 LMKERG 638
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 208/673 (30%), Positives = 356/673 (52%), Gaps = 58/673 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N ++ G+ G L AR +FD MP R +VS+ +++ GYS+ + E+++L M ++++
Sbjct: 103 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLV 162
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ F +I+ CA ++ GKQ+H V+K +E + +
Sbjct: 163 PDQFAFGSIIKACACAGDVVLGKQLHAQVIK----------------------LESSSHL 200
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-K 200
+ + ++ YV+ N MSDA VF +P KD++ W+ +I+G+++ G E +
Sbjct: 201 IAQ---------NALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQL--GFEFE 249
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL + M G PNEY F S ++AC+ L G +HGL IK + G +L
Sbjct: 250 ALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLC 309
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSI 316
+ Y C D A RV++++E P + N +I GL + G ++A +F+ + + ++I
Sbjct: 310 DMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAI 369
Query: 317 SYNSMI----------KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP------EME 360
S S++ +G ++ + L + S++++ T S + E
Sbjct: 370 SLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDF 429
Query: 361 RNP---VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
RN V+WN++++ +Q+ + L+L+ M + T L C + SL+ G
Sbjct: 430 RNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLG 489
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+H + KT ++ L+DMY++CGS+ A+ F S+ + +V +W+ L+ GY+
Sbjct: 490 SQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQS 549
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEH 536
G G EA++LF M I PN TFVGVL+AC GLV EG+K++ M++ +G+ PT EH
Sbjct: 550 GFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEH 609
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
+CVVDLL R+GHL+EAE FI +M +E D VVW LLSAC N+++ ++AA+ + +D
Sbjct: 610 CSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKID 669
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
+A+V+L +++A G W +R + +VKK PG SWI++ ++H F ED +
Sbjct: 670 PFNSTAHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSWIDVEDKIHIFFAEDVLH 729
Query: 657 PNCNVIYATLEHL 669
P + IY L ++
Sbjct: 730 PERDDIYTVLHNI 742
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/559 (22%), Positives = 234/559 (41%), Gaps = 100/559 (17%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+++ N I R Q+ A +F +P + ++SW++++ G+S+ E+LS + M
Sbjct: 200 LIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLS 259
Query: 78 SNV-KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
V NE F + L C+ L G QIH L +K G L YA C ++
Sbjct: 260 FGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLD 319
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+RVF+++ + W++++ G +GYA
Sbjct: 320 SARRVFNQIERPDTASWNVIIAGLAN--------------------------NGYA---- 349
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
++A+ +F MR SG +P+ + S++ A + A C+G +H +IKCGF D S+
Sbjct: 350 --DEAVSVFSEMRNSG-FIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVC 406
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRL----T 311
+L+ Y C +++ N + S N+++ + + + +F +
Sbjct: 407 NSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSEC 466
Query: 312 EANSISYNSMIKG-----------------------------------YAVYGQVDDSKR 336
E + I+ ++++G YA G + ++R
Sbjct: 467 EPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARR 526
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F+ M + ++S W+++I GY Q+ E+AL L+ M+ I+
Sbjct: 527 IFDSMDNGDVVS-----------------WSTLIVGYAQSGFGEEALILFREMKSSGIEP 569
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDA 452
TF + ACS +G +++G L+A + +P + + + +VD+ +R G +N+A
Sbjct: 570 NHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHC---SCVVDLLARAGHLNEA 626
Query: 453 QASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
+ + P+V W L++ G A E +L+ D N+ V + S
Sbjct: 627 ERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPF-NSTAHVLLCSMHAS 685
Query: 512 AGLVNEGMKIFRSMKSYGV 530
+G + + SMK + V
Sbjct: 686 SGNWEDAALLRSSMKKHDV 704
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/540 (22%), Positives = 216/540 (40%), Gaps = 98/540 (18%)
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S+ K+ T+ +++ C+ SL G++IH +L S + + + +L Y C + +
Sbjct: 58 SSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD 117
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VFD + E N + ++ ++ GY Q ++A +++KM + D+V
Sbjct: 118 AREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLV--------------- 162
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
P+++ F S+I+ACA G GK +H +IK
Sbjct: 163 ------------------PDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQN 204
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING----------------LISMGRIE 301
ALI Y A +V+ + L + +S+I G ++S G
Sbjct: 205 ALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFH 264
Query: 302 DAELIFNRLTEANS----ISYNSMIKG--------------------YAVYGQVDDSKRL 337
E IF +A S Y S I G YA G +D ++R+
Sbjct: 265 PNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRV 324
Query: 338 FEKMPHRSIISLNTMISVIPEMER-NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
F ++ER + +WN +I+G N ++A+ ++ MR
Sbjct: 325 FN------------------QIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIP 366
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ L A + +L QG +H+ ++K F +++ V SL+ MY+ C + F
Sbjct: 367 DAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLF 426
Query: 457 SSI-SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
+ + +W A++ H E + LF++ML + P+ T +L CV +
Sbjct: 427 EDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSL 486
Query: 516 NEGMKIFRSMKSYGVVPTLEHY--TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
G ++ G+V LE + ++D+ + G L +A M D V W L+
Sbjct: 487 KLGSQVHCYSWKTGLV--LEQFIKNGLIDMYAKCGSLRQARRIFDSMD-NGDVVSWSTLI 543
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 109/210 (51%), Gaps = 2/210 (0%)
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTR-STFSVLFHACSCLGSLQQGQLLHAHLV 425
N I+ +N+ + +AL+ + +K + + R T+ L ACS SL QG+ +H H++
Sbjct: 32 NDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 91
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ + + + ++ MY +CGS+ DA+ F + N+ ++T+++ GYS +G +EA+
Sbjct: 92 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAIT 151
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
L+ ML+ D+VP+ F ++ AC AG V G ++ + L ++ +
Sbjct: 152 LYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYV 211
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
R + +A + +P + D + W ++++
Sbjct: 212 RFNQMSDASKVFYGIPAK-DLISWSSIIAG 240
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 201/654 (30%), Positives = 328/654 (50%), Gaps = 60/654 (9%)
Query: 23 KAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL 82
+A T CG +L A + +P R+ VSWN +L GY++ + + ++ + S ++
Sbjct: 194 EAYTSCG---ELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEI 250
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
++ T T+L C +L G+ +H V+K G E + S L+ Y+ C EEA VF
Sbjct: 251 SKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVF 310
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
+ E + + S M+ + + ++ +A D+F+KM V
Sbjct: 311 IRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGV--------------------- 349
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
PN Y F + +R G + VH ++K GF + +G A++
Sbjct: 350 ------------KPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNM 397
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISY 318
Y A A +D + P + N++++ S E IF ++ AN +Y
Sbjct: 398 YVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTY 457
Query: 319 NSMIK----------GYAVYGQV--------DDSKRLFEKMPHRSIISLNTMISVIPEME 360
S+++ G V+ + D R+ M +S + + E
Sbjct: 458 VSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKE 517
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
R+ +W ++SGY + EK ++ + +M + I + +T +V CS + SL G L
Sbjct: 518 RDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQL 577
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H+ +K+ + S+V G +LVDMY +CG+I DA+ F + + AW ++ GYS HG G
Sbjct: 578 HSWAIKSGWNSSVVSG-ALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHG 636
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTC 539
+A+ F+ M+++ P+ TFVGVLSAC AGL+NEG K F+S+ S YG+ PT+EHY C
Sbjct: 637 YKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYAC 696
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
+VD+L ++G L EAE I MP+ D+ +W +L AC N+E+ ERAA+++F L+
Sbjct: 697 MVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHD 756
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
S+ ++LSNIYA LG+W +R L VKK+PGCSWIE+N ++H F +D
Sbjct: 757 ASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFLSQD 810
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 128/573 (22%), Positives = 256/573 (44%), Gaps = 68/573 (11%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
+CGR LV AR +FD MP R +V+W M+ ++ D++L + + M++ + N T
Sbjct: 97 KCGR---LVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFT 153
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+++L C+ + Q+H V+K +VGS L+ Y +C E++ A+ V L
Sbjct: 154 LASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLP 213
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
E +++ W+ +L GY + ++ +++ KL++
Sbjct: 214 ERSDVSWNALLNGYARHGDY-----------RRVMIIIEKLVA----------------- 245
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
SG+ + ++YT +V++ C LG G+ VH +IK G E D + L+E Y C
Sbjct: 246 ----SGDEI-SKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRC 300
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
+ + A V+ R++ P + +++I+ +A +F +++ + + G A
Sbjct: 301 LSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIA 360
Query: 327 --------------VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------ERNPV 364
V+ + S K +I+++ + + + E +
Sbjct: 361 GVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTF 420
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+WN+++S + + E+ L+++ M + T+ + C+ L +L+ G +HA +
Sbjct: 421 SWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACI 480
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
+K+ +++ V LVDMY++ G A F + + +WT +M+GY+ + V
Sbjct: 481 LKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVV 540
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI----FRSMKSYGVVPTLEHYTCV 540
F ML ++I P+ AT LS C + G+++ +S + VV +
Sbjct: 541 EYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSVVS-----GAL 595
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
VD+ + G++ +AE + D V W ++
Sbjct: 596 VDMYVKCGNIADAEMLFHESETR-DQVAWNTII 627
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 208/466 (44%), Gaps = 36/466 (7%)
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+ + LH D LL SL+ + Y +C + DA VF MP +D+V WT +IS + + D
Sbjct: 73 HARLLRSALHPDTFLLDSLLNM-YCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGD 131
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
++AL +F M + G PN +T SV++AC+ VHG ++K D +G
Sbjct: 132 S-DQALDMFARMNQEG-IAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVG 189
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----E 312
+L+E Y C D A V L + N+L+NG G +I +L E
Sbjct: 190 SSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDE 249
Query: 313 ANSISYNSMIK-----GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-------- 359
+ + +++K G A YGQ + + R + + N + S + EM
Sbjct: 250 ISKYTLPTVLKCCMELGLAKYGQ-----SVHASVIKRGLETDNVLNSCLVEMYSRCLSAE 304
Query: 360 ----------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
E + V ++MIS + ++++ +AL L++ M + + F + S
Sbjct: 305 EAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVAS 364
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
G + +HA++VK+ F VG ++++MY + G++ DA +F I P+ +W
Sbjct: 365 RTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNT 424
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
+++ + + + +F+ M + N T+V VL C + G ++ + G
Sbjct: 425 ILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSG 484
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + +VD+ +SG A + + E DA W ++S
Sbjct: 485 LQNDTDVSRMLVDMYAQSGCFTSACLVFEQLK-ERDAFSWTVIMSG 529
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 179/398 (44%), Gaps = 35/398 (8%)
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
+ ++ CA G+ +H L++ D + +L+ YC C A RV+D + +
Sbjct: 55 AALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHR 114
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKG----------YAVY 328
+ A ++I+ + G + A +F R+ + N + S++K + V+
Sbjct: 115 DIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVH 174
Query: 329 GQVDDSKRLFEKMPHRSII----------SLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
GQV L + S++ + T++ +PE R+ V+WN++++GY ++
Sbjct: 175 GQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPE--RSDVSWNALLNGYARHGD 232
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+ + + + + + ++ T + C LG + GQ +HA ++K E++ + +
Sbjct: 233 YRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSC 292
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
LV+MYSRC S +A F I P+V +A+++ + H + EA+ LF M + PN
Sbjct: 293 LVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPN 352
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD----LLGRSGHLHEAE 554
FVG+ R G N + RS+ +Y V V D + + G + +A
Sbjct: 353 HYIFVGIAGVASRTGDAN----LCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDA- 407
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
D+ E D W +LSA + N E G R ++M
Sbjct: 408 TVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQM 445
>gi|255562697|ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538432|gb|EEF40038.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 704
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 214/696 (30%), Positives = 355/696 (51%), Gaps = 60/696 (8%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
+ AT + T Q + N I G A+ LFD+MP + +S+N ++ Y +
Sbjct: 30 ILATTASTSYAQSPYL--NNNLIAMYAHCGSRSDAQKLFDRMPRKNAISYNALIAAYCRD 87
Query: 63 AKFDE-SLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
+ ++ S L S M ++ N TF+++L VC L G +H VL+ GY V
Sbjct: 88 SSYETLSFKLFSDMGIQRLRPNGATFTSLLQVCCLLEDWFLGSTLHGQVLQFGYVNDICV 147
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+ LL Y++C ++E A +VF GY +KD
Sbjct: 148 QTMLLGMYSDCGDLESACKVF----------------GYA---------------VEKDD 176
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
V W +ISGY K+ D +++L LF M SG + ++T + AC++LG + +G+++H
Sbjct: 177 VFWNSMISGYLKN-DRIKESLSLFGEMVRSG-TIFTQFTCSMALNACSKLGYYSQGRIIH 234
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
+I D ++ AL++ Y C A+ ++ R++ P L + NS+I+ E
Sbjct: 235 AQVIVSNILPDSALQNALLDMYYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNEEGE 294
Query: 302 DAELIFNRL-----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR----SIISLNTM 352
A +F +L + + ++ ++I + D + L ++ S+ N +
Sbjct: 295 KAMGLFVKLLGMSTCKPDEYTFTAIISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNAL 354
Query: 353 IS-------------VIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
+S V ME ++ V W MI G+ + E A++L+ MR+
Sbjct: 355 LSMYFRNSDVEAARGVFSLMEEKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSDS 414
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
S C+ L L+QGQ+LH VKT E+ + V SLVDMY++ G++ AQ FS
Sbjct: 415 FALSGALSVCADLAILKQGQMLHTQAVKTGCEAEISVCGSLVDMYAKNGNLQAAQLIFSQ 474
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ +P++ W +++ GYSHHG+ EAV+LF +LE + P+ TF+ +LSAC +GLV +G
Sbjct: 475 VCNPDLKCWNSMIGGYSHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSGLVEKG 534
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV-VWGALLSACW 577
++ MK G+ P +HY+C+V LL R+G L EAEE I + + + +W LLS+C
Sbjct: 535 KFLWDYMKKNGITPGPKHYSCMVSLLSRAGLLDEAEELITESTCSEEHLKLWRTLLSSCV 594
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
N+ VG RAA+++ LD + + Y++LSN+YAV G+W ++RK++ L ++KDPG
Sbjct: 595 NRRNLTVGARAAKQVLRLDPEDSATYILLSNLYAVTGRWDGVAELRKKIRGLMLEKDPGV 654
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
SWIE + +H FS +D++NP + A + L N+
Sbjct: 655 SWIEAKNDIHVFSSDDQSNPVIDEAQAEVRRLQRNM 690
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 6/180 (3%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLV----KTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
L C+ + SL++ + LHA ++ T + + Y+ +L+ MY+ CGS +DAQ F
Sbjct: 7 LEALIKKCTTINSLKKARQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSRSDAQKLF 66
Query: 457 SSISSPNVAAWTALMNGYSHH-GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
+ N ++ AL+ Y + + LF M Q + PN ATF +L C
Sbjct: 67 DRMPRKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRLRPNGATFTSLLQVCCLLEDW 126
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + + +G V + T ++ + G L A + + +E D V W +++S
Sbjct: 127 FLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACK-VFGYAVEKDDVFWNSMISG 185
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 202/659 (30%), Positives = 325/659 (49%), Gaps = 90/659 (13%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R L AR +F++MP+R VVSWN+++ GY+ ++E+L + V + T S+
Sbjct: 162 RFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSS 221
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C L S+ +G IH L+ K G + V +GLL Y + + +R+FD++ +
Sbjct: 222 VLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRD 281
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ GY Q L ++ +F++M + F+
Sbjct: 282 AVSWNTMICGYSQVGLYEESIKLFMEMVNQ-------------------------FK--- 313
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P+ T S+++AC LG GK VH +I G+E D + LI Y C
Sbjct: 314 ------PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNL 367
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---TEANSISY-------- 318
+ V+ ++ + NS+IN I G ++A +F + + +S++Y
Sbjct: 368 LASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMST 427
Query: 319 ---------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
N+++ YA G++ DS ++FE M R II
Sbjct: 428 QLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDII---- 483
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
TWN++I+ V + L++ MR + +T + CS L
Sbjct: 484 -------------TWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLL 530
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
+ +QG+ +H + K ES+V VG L++MYS+CGS+ ++ F + + +V WTAL+
Sbjct: 531 AAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALI 590
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGV 530
+ +G G +AV F M IVP+ FV ++ AC +GLV EG+ F M K Y +
Sbjct: 591 SACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKI 650
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
P +EHY CVVDLL RS L +AE+FI MP++ D+ +WGALLSAC + E+ ER ++
Sbjct: 651 EPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSE 710
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
++ L+ YV++SNIYA LGKW + IRK + +KKDPGCSW+E+ ++V+ F
Sbjct: 711 RIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVF 769
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 142/570 (24%), Positives = 262/570 (45%), Gaps = 58/570 (10%)
Query: 45 PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
P V WN+++ + F E+LSL S R ++ + TF ++++ CA L K
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 105 QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
IH VL G+ ++G+ L+ Y ++++A++VF+E
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEE-------------------- 175
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDS 223
MP +DVV W LISGY + +G +AL+++ R G +P+ YT S
Sbjct: 176 -----------MPLRDVVSWNSLISGY--NANGYWNEALEIYYRFRNLGV-VPDSYTMSS 221
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
V+RAC LG+ EG ++HGL+ K G + D + L+ YC R++D++
Sbjct: 222 VLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRD 281
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLT---EANSISYNSMIKGYAVYGQVDDSKRLFEK 340
+ N++I G +G E++ +F + + + ++ S+++ G ++ K + +
Sbjct: 282 AVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDY 341
Query: 341 MPHRSIISLNTMISVIPEME------------------RNPVTWNSMISGYVQNNLHEKA 382
M T +++ M ++ V+WNSMI+ Y+QN ++A
Sbjct: 342 MITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEA 401
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
++L+ M K + T+ +L + LG L G+ LH L K F SN+ V +LVDM
Sbjct: 402 MKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDM 460
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
Y++CG + D+ F ++ + ++ W ++ H + + + M + + P+ AT
Sbjct: 461 YAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATM 520
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+ +L C +G +I + G+ + ++++ + G L + + K M
Sbjct: 521 LSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKT 580
Query: 563 ELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+ D V W AL+SAC + + RA +M
Sbjct: 581 K-DVVTWTALISACGMYGEGKKAVRAFGEM 609
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/479 (22%), Positives = 206/479 (43%), Gaps = 61/479 (12%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
++N I + G L+ ++ +F M + VSWN+M+ Y + FDE++ L M +++
Sbjct: 353 ASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM-KTD 411
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
VK + T+ +LS+ QL L GK++HC + K G+ V + L+ YA C E+ ++
Sbjct: 412 VKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSL 471
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+VF+ M +D++ W +I+ S D C
Sbjct: 472 KVFE-------------------------------NMKARDIITWNTIIASCVHSED-CN 499
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
L++ MR G P+ T S++ C+ L A +GK +HG + K G E D +G L
Sbjct: 500 LGLRMISRMRTEGVT-PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVL 558
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NS 315
IE Y C + + +V+ ++ + +LI+ G + A F + A +
Sbjct: 559 IEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDH 618
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
+++ ++I + G V++ F +M I P +E + ++ +
Sbjct: 619 VAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIE--------PRIEH----YACVVDLLSR 666
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVY 434
+ L +KA ++M + S + L AC G + + + +++ P ++ Y
Sbjct: 667 SALLDKAEDFILSM---PLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYY 723
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVA-----AWTALMNGYSHHGLGSEAVLLFE 488
V S ++Y+ G + ++ SI + + +W + N G G++ FE
Sbjct: 724 VLVS--NIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFE 780
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
+S+I ++ V S +L K H + + + + N WNS+I N L
Sbjct: 36 HSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGL 95
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+AL LY +++ + TF + +AC+ L + + +H ++ F S++Y+G +
Sbjct: 96 FSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNA 155
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+DMY R ++ A+ F + +V +W +L++GY+ +G +EA+ ++ +VP+
Sbjct: 156 LIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPD 215
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
+ T VL AC G V EG I ++ G+ + ++ + + L +
Sbjct: 216 SYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFD 275
Query: 559 DMPIELDAVVWGALL 573
M + DAV W ++
Sbjct: 276 KMVLR-DAVSWNTMI 289
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV +N + + G++ + +F+ M R +++WNT++ + L ++S M
Sbjct: 451 IVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRT 510
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V + T +IL VC+ L + GK+IH + K G E VG+ L+ Y+ C +
Sbjct: 511 EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLR- 569
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
++F VF M KDVV WT LIS +G
Sbjct: 570 ------------------------------NSFQVFKLMKTKDVVTWTALISACGMYGEG 599
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+KA++ F M +G +P+ F ++I AC+ G EG
Sbjct: 600 -KKAVRAFGEMEAAGI-VPDHVAFVAIIFACSHSGLVEEG 637
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 201/684 (29%), Positives = 343/684 (50%), Gaps = 94/684 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L R +FD++ + WN M+ YS + ES++L M +K N TFS+IL
Sbjct: 199 GDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSIL 258
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
A + + +G+Q+H L+ K G+ + V + L+ FY ++ A+++FDEL +
Sbjct: 259 KCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTD---- 314
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS-VDGCEKALKLFRWMRE 210
+DV+ W +ISGY K+ +D ++ +++F M
Sbjct: 315 ---------------------------RDVISWNSMISGYVKNGLD--DRGIEIFIKMLV 345
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGALIEFYCGCEAF 269
G ++ + T +V ACA +G GKV+H IK + + L++ Y C
Sbjct: 346 FGVDI-DLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDL 404
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT------------------ 311
+ A+RV++R++ + + S+I G + G + A +F+ +
Sbjct: 405 NSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNAC 464
Query: 312 ---------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
E NS N++ YA G + D+ +F M + +IS
Sbjct: 465 AINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVIS-- 522
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
WN+MI GY +N+L +AL L+ M++ + +T + + AC+
Sbjct: 523 ---------------WNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACAS 566
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L +L +G+ +H + ++ + + YV ++VDMY +CG + A++ F I + ++ +WT +
Sbjct: 567 LAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVM 626
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY-G 529
+ GY HG GSEA+ F M I P+ +F+ +L AC +GL++EG KIF MK
Sbjct: 627 IAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQ 686
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ P LEHY C+VDLL R+G+L +A +FIK MPI+ DA +WGALL C ++++ E+ A
Sbjct: 687 IEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVA 746
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+++F L+ + YV+L+NIYA KW + +RK++ +KK+PGCSWIE+ +++ F
Sbjct: 747 ERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIF 806
Query: 650 SVEDRNNPNCNVIYATLEHLTANL 673
D + P I L+ L + +
Sbjct: 807 VAGDCSKPQAKKIELLLKRLRSKM 830
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 247/532 (46%), Gaps = 62/532 (11%)
Query: 68 SLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLF 127
++ L+ + SN L + +IL +CA+ S+ DG+++ ++ SG +G L+F
Sbjct: 136 AMELLCSSQNSNFDLG--AYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVF 193
Query: 128 FYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKL 187
Y C +++E + V F K+ + + +W +
Sbjct: 194 MYVKCGDLKEGRMV-------------------------------FDKLSESKIFLWNLM 222
Query: 188 ISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
IS Y+ S + E ++ LF+ M E G PN YTF S+++ A + EG+ VHGL+ K
Sbjct: 223 ISEYSGSGNYGE-SINLFKQMLELGIK-PNSYTFSSILKCFAAVARVEEGRQVHGLICKL 280
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA--EL 305
GF ++ +LI FY A +++D L + + + NS+I+G + G ++D E+
Sbjct: 281 GFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNG-LDDRGIEI 339
Query: 306 IFNRLTEANSISYNSMIK--------GYAVYGQVDDSKRLFEKMPHRSII---------- 347
L I +M+ G + G+V S + R +
Sbjct: 340 FIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYS 399
Query: 348 ---SLNTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
LN+ I V M E+ V+W SMI+GYV+ L + A++L+ M+ + +
Sbjct: 400 KCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTS 459
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ +AC+ G+L+ G+++H ++ + E+N +V +L DMY++CGS+ DA FS + +
Sbjct: 460 ILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKD 519
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V +W ++ GY+ + L +EA+ LF M +++ P+ T +L AC +++G +I
Sbjct: 520 VISWNTMIGGYTKNSLPNEALTLFAEM-QRESKPDGTTVACILPACASLAALDKGREIHG 578
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G VVD+ + G L A DM D V W +++
Sbjct: 579 YALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLF-DMIPNKDLVSWTVMIAG 629
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
TN + + G LV AR+LFD +P + +VSW M+ GY E+++ + M + +
Sbjct: 592 TNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGI 651
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
+ +E +F +IL C+ L +G +I ++ K
Sbjct: 652 EPDEVSFISILYACSHSGLLDEGWKIFNIMKK 683
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 209/699 (29%), Positives = 340/699 (48%), Gaps = 99/699 (14%)
Query: 48 TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIH 107
TV WN ++ ++ L L M R + + TF +L C ++ S G +H
Sbjct: 90 TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVH 149
Query: 108 CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
+V SG+E FVG+GL+ Y C E A++VFDE+ E VG
Sbjct: 150 AVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG--------VG-------- 193
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
D+V W +++ Y + D +A+K+F M E P+ + +V+ A
Sbjct: 194 ------------DLVSWNSIVAAYMQGGDSI-RAMKMFERMTEDLGIRPDAVSLVNVLPA 240
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
CA +GA+ GK VHG ++ G D +G A+++ Y C + A +V++R++ + +
Sbjct: 241 CASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSW 300
Query: 288 NSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKM-- 341
N+++ G +GR +DA +F ++ E N ++++++I GYA G ++ +F +M
Sbjct: 301 NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRL 360
Query: 342 --------------------------------------------PHRSIISLNTMI---- 353
P ++ +N +I
Sbjct: 361 CGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYS 420
Query: 354 ------------SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA--IDRTRS 399
+IP +R+ VTW +I G Q+ +AL+L+ M + +
Sbjct: 421 KCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAF 480
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN-VYVGTSLVDMYSRCGSINDAQASFSS 458
T S AC+ LG+L+ G+ +HA++++ FES ++V L+DMYS+ G ++ A+ F +
Sbjct: 481 TISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDN 540
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ N +WT+LM GY HG G EA+ +F M + +VP+ TFV VL AC +G+V++G
Sbjct: 541 MHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQG 600
Query: 519 MKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
+ F M K +GVVP EHY C+VDLL R+G L EA E I+ MP++ VW ALLSAC
Sbjct: 601 INYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACR 660
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
+ N+E+GE AA ++ L+ +Y +LSNIYA W IR + + +KK PGC
Sbjct: 661 VYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGC 720
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
SW++ F D ++P IY L L + ++
Sbjct: 721 SWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKAL 759
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 203/484 (41%), Gaps = 104/484 (21%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N + + G + A +F++M ++ VVSWN M+ GYS+ +FD++L L + ++
Sbjct: 270 NAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIE 329
Query: 82 LNETTFSTILSVCAQLNSLID-----------GKQIHCLVLKSGYECFEFVGSGLLFFYA 130
LN T+S +++ AQ + G + + + L S G+ L
Sbjct: 330 LNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKET 389
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD--VVVWTKLI 188
+C I+ + + D+ ++ + ++ Y +C A +F +P KD VV WT LI
Sbjct: 390 HCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLI 449
Query: 189 SGYAKSVDGCEKALKLFRWMRESGE-NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
G A+ + E AL+LF M + MPN +T + ACARLGA G+ +H +++
Sbjct: 450 GGNAQHGEANE-ALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLR- 507
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
+R E+ L +N LI+ G ++ A ++F
Sbjct: 508 -----------------------------NRFESAMLFVANCLIDMYSKSGDVDAARVVF 538
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
+ + + N +S+ S++ GY ++G+ +++ ++F +M + ++P+
Sbjct: 539 DNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEM---------QKVGLVPD--------- 580
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
TF V+ +ACS G + QG + K
Sbjct: 581 ------------------------------GVTFVVVLYACSHSGMVDQGINYFNGMNK- 609
Query: 428 PFESNVYVGTS----LVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG---YSHHGL 479
+ V G +VD+ SR G +++A + P A W AL++ Y++ L
Sbjct: 610 --DFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVEL 667
Query: 480 GSEA 483
G A
Sbjct: 668 GEYA 671
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+ ++ N I ++G + AR +FD M R VSW +++ GY + +E+L +
Sbjct: 511 ESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFY 570
Query: 74 TMHRSNVKLNETTFSTILSVCAQ 96
M + + + TF +L C+
Sbjct: 571 EMQKVGLVPDGVTFVVVLYACSH 593
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 210/653 (32%), Positives = 327/653 (50%), Gaps = 82/653 (12%)
Query: 53 NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
NTM+ GY + +++ + M SNV + T+ + C+ + DGK I VLK
Sbjct: 95 NTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLK 154
Query: 113 SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
G++ ++ + L+ YA C + +A++VFD + + W+ ML GYV + +A DV
Sbjct: 155 VGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDV 214
Query: 173 FIKMP-------------------------------KKDVVVWTKLISGYAKSVDGCEKA 201
+ +MP +KD+V W+ LIS Y ++ + E+A
Sbjct: 215 YDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQN-EMYEEA 273
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
L LF+ M +G M +E SV+ AC+RL GK+VHGL++K G E ++ ALI
Sbjct: 274 LILFKEMNANG-IMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIH 332
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
Y CE A +++ E+ CL+ IS+NSM
Sbjct: 333 MYSSCEEVVTAQKLFS--ESCCLD-----------------------------QISWNSM 361
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK 381
I GY G+++ ++ LF+ MP +++ V+W++MISGY Q + +
Sbjct: 362 ISGYVKCGEIEKARALFDSMP-----------------DKDNVSWSAMISGYAQQDRFTE 404
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
L L+ M+ + + AC+ L +L QG+ +HA++ K + N+ +GT+L++
Sbjct: 405 TLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLIN 464
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY + G + DA F + V+ W AL+ G + +GL +++ F M E + PN T
Sbjct: 465 MYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEIT 524
Query: 502 FVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
FV VL AC GLV+EG + F SM + + + P ++HY C+VDLLGR+G L EAEE I+ M
Sbjct: 525 FVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESM 584
Query: 561 PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKM 620
P+ D WGALL AC + + E GER +K+ L V+LSNIYA G W +
Sbjct: 585 PMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVL 644
Query: 621 DIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
++R + V K PGCS IE + RVH F D+ +P I L+ + L
Sbjct: 645 EVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKL 697
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 209/416 (50%), Gaps = 21/416 (5%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E ++++N I G+ G + A LF++M + +VSW+ ++ Y + ++E+L L
Sbjct: 220 ERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKE 279
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M+ + + ++E ++LS C++L +I GK +H LV+K G E + + + L+ Y++C E
Sbjct: 280 MNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEE 339
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+ A+++F E +++ W+ M+ GYV+C + A +F MP KD V W+ +ISGYA+
Sbjct: 340 VVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQ 399
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
D + L LF+ M+ G P+E SVI AC L A +GK +H + K G + +
Sbjct: 400 -DRFTETLVLFQEMQIEGTK-PDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINII 457
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-- 312
+G LI Y + A+ V+ LE ++ N+LI GL G ++ + F+ + E
Sbjct: 458 LGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHG 517
Query: 313 --ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
N I++ +++ G VD+ R F M I N + M+
Sbjct: 518 VTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIK------------HYGCMV 565
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+ + ++A +L +M +A D ST+ L AC G + G+ + LV+
Sbjct: 566 DLLGRAGMLKEAEELIESM-PMAPD--VSTWGALLGACKKYGDNETGERIGRKLVE 618
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 210/440 (47%), Gaps = 53/440 (12%)
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
++ ++ +F + + + ++ GY + C KA+ ++++M ES N YT+ +
Sbjct: 76 INQSYQIFSHIENPNGFICNTMMKGYMQRNSPC-KAIWVYKFMLESNVAADN-YTYPILF 133
Query: 226 RACA-RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
++C+ RL F +GK + ++K GF+ D I LI Y C A +V+D +
Sbjct: 134 QSCSIRLAEF-DGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDM 192
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
+ NS++ G + +G +E+A+ +++R+ E N I+ NSMI + G V+++ +LF +M +
Sbjct: 193 VSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQK 252
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
++S W+++IS Y QN ++E+AL L+ M I +
Sbjct: 253 DLVS-----------------WSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSV 295
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS-------------------- 444
ACS L + G+L+H +VK E+ V + +L+ MYS
Sbjct: 296 LSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQ 355
Query: 445 -----------RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+CG I A+A F S+ + +W+A+++GY+ +E ++LF+ M +
Sbjct: 356 ISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIE 415
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
P+ V V+SAC +++G I ++ G+ + T ++++ + G + +A
Sbjct: 416 GTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDA 475
Query: 554 EEFIKDMPIELDAVVWGALL 573
E K + E W AL+
Sbjct: 476 LEVFKGLE-EKGVSTWNALI 494
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 126/561 (22%), Positives = 231/561 (41%), Gaps = 136/561 (24%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD + +VSWN+ML GY +E+ + M NV
Sbjct: 175 GNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNV----------- 223
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ ++ + +EEA ++F+E+ + + +
Sbjct: 224 ----------------------------IASNSMIVLFGKKGNVEEACKLFNEMKQKDLV 255
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS ++ Y Q + E+AL LF+ M +
Sbjct: 256 SWSALISCYEQNEMY--------------------------------EEALILFKEMNAN 283
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G M +E SV+ AC+RL GK+VHGL++K G E ++ ALI Y CE
Sbjct: 284 G-IMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVT 342
Query: 272 AMRVYDRLENPCLN--ASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
A +++ E+ CL+ + NS+I+G + G IE A +F+ + + +++S+++MI GYA
Sbjct: 343 AQKLFS--ESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQD 400
Query: 330 QVDDSKRLFEKM------PHR----SIISLNTMISVIPE--------------------- 358
+ ++ LF++M P S+IS T ++ + +
Sbjct: 401 RFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGT 460
Query: 359 ----------------------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
E+ TWN++I G N L +K+L+ + M++ +
Sbjct: 461 TLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTP 520
Query: 397 TRSTFSVLFHACSCLGSLQQGQL-LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
TF + AC +G + +G ++ + + N+ +VD+ R G + +A+
Sbjct: 521 NEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEEL 580
Query: 456 FSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
S+ +P+V+ W AL+ +G + ++E + P+ F VL + + A
Sbjct: 581 IESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVE--LHPDHDGF-NVLLSNIYASK 637
Query: 515 VN--EGMKIFRSMKSYGVVPT 533
N + +++ M+ +GVV T
Sbjct: 638 GNWVDVLEVRGMMRQHGVVKT 658
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 134/270 (49%), Gaps = 15/270 (5%)
Query: 314 NSISYNSMIKGYAVYGQVDDS---KRLFEKMPHRSIISLNTMISVIPEMER-NPVTWNSM 369
N +N ++ + G DS RL + I++N + +E N N+M
Sbjct: 38 NIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTM 97
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ GY+Q N KA+ +Y M + + T+ +LF +CS + G+ + H++K F
Sbjct: 98 MKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGF 157
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+S+VY+ +L++MY+ CG+++DA+ F S ++ +W +++ GY G EA +++
Sbjct: 158 DSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDR 217
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
M E++++ + + V + G V E K+F MK +V ++ ++ ++
Sbjct: 218 MPERNVIASNSMIV----LFGKKGNVEEACKLFNEMKQKDLVS----WSALISCYEQNEM 269
Query: 550 LHEAEEFIKDM---PIELDAVVWGALLSAC 576
EA K+M I +D VV ++LSAC
Sbjct: 270 YEEALILFKEMNANGIMVDEVVVLSVLSAC 299
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 209/699 (29%), Positives = 340/699 (48%), Gaps = 99/699 (14%)
Query: 48 TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIH 107
TV WN ++ ++ L L M R + + TF +L C ++ S G +H
Sbjct: 109 TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVH 168
Query: 108 CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
+V SG+E FVG+GL+ Y C E A++VFDE+ E VG
Sbjct: 169 AVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG--------VG-------- 212
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
D+V W +++ Y + D +A+K+F M E P+ + +V+ A
Sbjct: 213 ------------DLVSWNSIVAAYMQGGDSI-RAMKMFERMTEDLGIRPDAVSLVNVLPA 259
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
CA +GA+ GK VHG ++ G D +G A+++ Y C + A +V++R++ + +
Sbjct: 260 CASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSW 319
Query: 288 NSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKM-- 341
N+++ G +GR +DA +F ++ E N ++++++I GYA G ++ +F +M
Sbjct: 320 NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLL 379
Query: 342 --------------------------------------------PHRSIISLNTMI---- 353
P ++ +N +I
Sbjct: 380 CGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYS 439
Query: 354 ------------SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA--IDRTRS 399
+IP +R+ VTW +I G Q+ +AL+L+ M + +
Sbjct: 440 KCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAF 499
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN-VYVGTSLVDMYSRCGSINDAQASFSS 458
T S AC+ LG+L+ G+ +HA++++ FES ++V L+DMYS+ G ++ A+ F +
Sbjct: 500 TISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDN 559
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ N +WT+LM GY HG G EA+ +F M + +VP+ TFV VL AC +G+V++G
Sbjct: 560 MHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQG 619
Query: 519 MKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
+ F M K +GVVP EHY C+VDLL R+G L EA E I+ MP++ VW ALLSAC
Sbjct: 620 INYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACR 679
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
+ N+E+GE AA ++ L+ +Y +LSNIYA W IR + + +KK PGC
Sbjct: 680 VYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGC 739
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
SW++ F D ++P IY L L + ++
Sbjct: 740 SWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKAL 778
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 204/484 (42%), Gaps = 104/484 (21%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N + + G + A +F++M ++ VVSWN M+ GYS+ +FD++L L + ++
Sbjct: 289 NAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIE 348
Query: 82 LNETTFSTILSVCAQ-----------LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
LN T+S +++ AQ L+ G + + + L S G+ L
Sbjct: 349 LNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKET 408
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD--VVVWTKLI 188
+C I+ + + D+ ++ + ++ Y +C A +F +P KD VV WT LI
Sbjct: 409 HCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLI 468
Query: 189 SGYAKSVDGCEKALKLFRWMRESGE-NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
G A+ + E AL+LF M + MPN +T + ACARLGA G+ +H +++
Sbjct: 469 GGNAQHGEANE-ALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLR- 526
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
+R E+ L +N LI+ G ++ A ++F
Sbjct: 527 -----------------------------NRFESAMLFVANCLIDMYSKSGDVDAARVVF 557
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
+ + + N +S+ S++ GY ++G+ +++ ++F +M + ++P+
Sbjct: 558 DNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEM---------QKVXLVPD--------- 599
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
TF V+ +ACS G + QG + K
Sbjct: 600 ------------------------------GVTFVVVLYACSHSGMVDQGINYFNGMNK- 628
Query: 428 PFESNVYVGTS----LVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG---YSHHGL 479
+ V G +VD+ SR G +++A + P A W AL++ Y++ L
Sbjct: 629 --DFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVEL 686
Query: 480 GSEA 483
G A
Sbjct: 687 GEYA 690
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+ ++ N I ++G + AR +FD M R VSW +++ GY + +E+L +
Sbjct: 530 ESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFY 589
Query: 74 TMHRSNVKLNETTFSTILSVCAQ 96
M + + + TF +L C+
Sbjct: 590 EMQKVXLVPDGVTFVVVLYACSH 612
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 217/687 (31%), Positives = 339/687 (49%), Gaps = 62/687 (9%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
+ N IT + +L +A +FD+MP R VSWN ++ ++ D + L+ M RS
Sbjct: 30 TANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDLDTTWQLLGAMRRST 89
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ TF +IL A + L G+Q+H ++LK G F GS LL YA C +++
Sbjct: 90 HAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGY 149
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VF + P+++ V W L++ Y++ V C+
Sbjct: 150 VVFQSM-------------------------------PERNYVSWNTLVASYSR-VGDCD 177
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
A + M G + ++ T ++ + +H ++K G E ++ A
Sbjct: 178 MAFWVLSCMELEGVEI-DDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNAT 236
Query: 260 IEFYCGCEAFDGAMRVYD-RLENPCLNASNSLINGLISMGRIEDAELIF----NRLTEAN 314
I Y C + A RV+D + L NS++ + + + A +F N E +
Sbjct: 237 ITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPD 296
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHR----SIISLNTMISVIPE-----ME----- 360
+ +Y ++ +V K L + R S+ N +IS+ ME
Sbjct: 297 AYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRI 356
Query: 361 ------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
++ TWNS+++GYVQ L E AL+L++ MR L I+ TFS + +CS L +L
Sbjct: 357 FFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATL 416
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
Q GQ H +K F++N YVG+SL+ MYS+CG I DA+ SF + S N W +++ GY
Sbjct: 417 QLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGY 476
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPT 533
+ HG G+ A+ LF +M E+ + + TFV VL+AC GLV EG SM+S +G+ P
Sbjct: 477 AQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPR 536
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
EHY C +DL GR+GHL +A ++ MP E DA+V LL AC F ++E+ + A+ +
Sbjct: 537 QEHYACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQIAKILL 596
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
L+ + YVILS +Y WG+K + + + VKK PG SWIE+ + VHAF+ ED
Sbjct: 597 ELEPEEHCTYVILSEMYGRFKMWGEKASVTRMMRERGVKKVPGWSWIEVKNNVHAFNAED 656
Query: 654 RNNPNCNVIYATLEHLTANLNSVVLFD 680
++P C IY L+ L + LFD
Sbjct: 657 HSHPQCEEIYILLQQLNEGIK---LFD 680
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 119/265 (44%), Gaps = 21/265 (7%)
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
A+ + N++I YA +++ + ++F++MPH R+ V+WN++IS
Sbjct: 26 ADPYTANNLITSYAKCTELNSAHQVFDEMPH-----------------RDTVSWNAIISA 68
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
+ + + QL MR+ TF + + +G L+ GQ LH+ ++K N
Sbjct: 69 FASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSEN 128
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V+ G++L+DMY++CG ++D F S+ N +W L+ YS G A + M
Sbjct: 129 VFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMEL 188
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG--HL 550
+ + + T +L+ A M++ + +G+ L + C + S L
Sbjct: 189 EGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGL--ELFNTVCNATITAYSECCSL 246
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
+AE + D V W ++L A
Sbjct: 247 QDAERVFDGAVLCRDLVTWNSMLGA 271
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/155 (18%), Positives = 65/155 (41%), Gaps = 1/155 (0%)
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H +K ++ Y +L+ Y++C +N A F + + +W A+++ ++ G
Sbjct: 16 HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
L M ++ TF +L G + G ++ M G+ + + +
Sbjct: 76 DTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSAL 135
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+D+ + G + + + MP E + V W L+++
Sbjct: 136 LDMYAKCGRVDDGYVVFQSMP-ERNYVSWNTLVAS 169
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 213/688 (30%), Positives = 344/688 (50%), Gaps = 97/688 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS-LVSTMHRSNVKLNETTFSTI 90
G + +R FDQ+P + V +WN+M+ Y F E++ + S ++ + TF +
Sbjct: 165 GDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPV 224
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L C +L+DG++IHC K G++ FV + L+ Y+ A+ +FD+
Sbjct: 225 LKACG---TLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDD------ 275
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
MP +D+ W +ISG ++ + + AL + MR
Sbjct: 276 -------------------------MPFRDMGSWNAMISGLIQNGNAAQ-ALDVLDEMRL 309
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G M N T S++ C +LG ++H +IK G EFD + ALI Y +
Sbjct: 310 EGIKM-NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLE 368
Query: 271 GAMRVYDRLENPCLNASNSLI---------------------NG-------LISMGRI-- 300
A + + ++ + + NS+I NG L+S+ I
Sbjct: 369 DARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVA 428
Query: 301 --EDAE-------LIFNR--LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
D + I R L E I N+++ YA G +D + ++FE +P + +IS
Sbjct: 429 QSRDCKNSRSVHGFIMRRGWLMEDVVIG-NAVVDMYAKLGLLDSAHKVFEIIPVKDVIS- 486
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHAC 408
WN++I+GY QN L +A+++Y M + I + T+ + A
Sbjct: 487 ----------------WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAY 530
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ +G+LQQG +H ++KT +V+V T L+D+Y +CG + DA + F + + W
Sbjct: 531 AHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWN 590
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
A+++ + HG + + LF ML++ + P+ TFV +LSAC +G V EG FR M+ Y
Sbjct: 591 AIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEY 650
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P+L+HY C+VDLLGR+G+L A +FIKDMP++ DA +WGALL AC N+E+G+ A
Sbjct: 651 GIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFA 710
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
+ ++F +D K + YV+LSNIYA +GKW +R +KK PG S IE+N +V
Sbjct: 711 SDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDV 770
Query: 649 FSVEDRNNPNCNVIYATLEHLTANLNSV 676
F ++++P C IY L LTA + S+
Sbjct: 771 FYTGNQSHPKCKEIYEELRVLTAKMKSL 798
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/462 (19%), Positives = 187/462 (40%), Gaps = 83/462 (17%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I + G L AR F QM I VVSWN+++ Y + + M +
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGF 413
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV-GSGLLFFYANCFEIEEAK 139
+ + T ++ S+ AQ + + +H +++ G+ + V G+ ++ YA ++ A
Sbjct: 414 QPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH 473
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+VF+ + + + W+ ++ GY Q L S+A +V
Sbjct: 474 KVFEIIPVKDVISWNTLITGYAQNGLASEAIEV--------------------------- 506
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
++ M E E +PN+ T+ S++ A A +GA +G +HG +IK D + L
Sbjct: 507 -----YKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCL 561
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYN 319
I+ Y C GR+ DA +F ++ + +S+++N
Sbjct: 562 IDVYGKC-------------------------------GRLVDAMSLFYQVPQESSVTWN 590
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
++I + ++G + + +LF +M + + + VT+ S++S +
Sbjct: 591 AIISCHGIHGHAEKTLKLFGEMLDEGV-------------KPDHVTFVSLLSACSHSGFV 637
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
E+ + M++ I + + + LG ++ + + P + + + +L
Sbjct: 638 EEGKWCFRLMQEYGIKPSLKHYGCM---VDLLGRAGYLEMAYDFIKDMPLQPDASIWGAL 694
Query: 440 VDMYSRCGSI---NDAQASFSSISSPNVAAWTALMNGYSHHG 478
+ G+I A + S NV + L N Y++ G
Sbjct: 695 LGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVG 736
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 22/256 (8%)
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN-NLH 379
++ YA G V S+ F+++P + + + WNSMIS YV N + H
Sbjct: 157 LVNLYANLGDVSLSRCTFDQIPQKDVYA-----------------WNSMISAYVHNGHFH 199
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
E Y + I TF + AC G+L G+ +H K F+ NV+V SL
Sbjct: 200 EAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASL 256
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+ MYSR G A++ F + ++ +W A+++G +G ++A+ + + M + I N
Sbjct: 257 IHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNF 316
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
T V +L C + G ++ M I + +G+ L ++++ + G+L +A + +
Sbjct: 317 VTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQ 376
Query: 560 MPIELDAVVWGALLSA 575
M I D V W ++++A
Sbjct: 377 MFIT-DVVSWNSIIAA 391
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 164/392 (41%), Gaps = 70/392 (17%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N + + G L +A +F+ +P++ V+SWNT++ GY++ E++ + M
Sbjct: 453 VVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEE 512
Query: 78 -SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ N+ T+ +IL A + +L G +IH V+K+ FV + L+ Y C
Sbjct: 513 CKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKC---- 568
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
R+ D A +F ++P++ V W +IS + +
Sbjct: 569 --GRLVD-------------------------AMSLFYQVPQESSVTWNAIISCHG--IH 599
Query: 197 G-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
G EK LKLF M + G P+ TF S++ AC+ G EGK L+ + G +
Sbjct: 600 GHAEKTLKLFGEMLDEGVK-PDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKH 658
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM----GRIEDAELIFNRLT 311
G +++ + A YD +++ L S+ L+ G IE + +RL
Sbjct: 659 YGCMVDLLGRAGYLEMA---YDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLF 715
Query: 312 EANS--ISYNSMIKG-YAVYGQ---VDDSKRL-----FEKMPHRSIISLNTMISVIPEME 360
E +S + Y ++ YA G+ VD + L +K P S I +N + V
Sbjct: 716 EVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVF---- 771
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
Y N H K ++Y +R L
Sbjct: 772 ------------YTGNQSHPKCKEIYEELRVL 791
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 5/157 (3%)
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
LHA LV ++++ T LV++Y+ G ++ ++ +F I +V AW ++++ Y H+G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197
Query: 480 GSEAV-LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
EA+ ++++L +I P+ TF VL AC G + +G KI G +
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAA 254
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ + R G A DMP D W A++S
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISG 290
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 199/660 (30%), Positives = 334/660 (50%), Gaps = 58/660 (8%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
+FD +P++ V+W ++ GYS+ + +L L M V+ + ++ +S C+ L
Sbjct: 171 VFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGF 230
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
L G+Q H + E V + L+ Y C + A+++FD
Sbjct: 231 LEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFD---------------- 274
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNE 218
C M +++V WT +I+GY + + C+ +A+ +F + + G P+
Sbjct: 275 ---C------------MENRNLVSWTTMIAGYMQ--NSCDAEAMAMFWQLSQEGWQ-PDV 316
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
+ S++ +C L A +G+ VH IK E DE + +LI+ Y CE A V++
Sbjct: 317 FACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEA 376
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDS 334
L + N++I G +G + A +F+++ + + +++ S++ + ++ S
Sbjct: 377 LAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELS 436
Query: 335 KRL----------FEKMPHRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQN 376
K++ + S+I + + S++ + + R+ V WN+MI G QN
Sbjct: 437 KQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQN 496
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
E+A++L+ ++ + TF L S L S+ GQ HA ++K +S+ +V
Sbjct: 497 EQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVS 556
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+L+DMY++CG I + + F S +V W ++++ Y+ HG EA+ +F +M +
Sbjct: 557 NALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVE 616
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
PN TFVGVLSAC AGLV+EG++ F MK+ Y + P EHY VV+L GRSG LH A+E
Sbjct: 617 PNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKE 676
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
FI+ MPIE A VW +LLSAC + N+E+G A + D V++SNIYA G
Sbjct: 677 FIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGL 736
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
W +R+ + V K+PG SWIE+ VH F R +P +VIY+ L+ LT+ L +
Sbjct: 737 WSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSILKN 796
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/567 (22%), Positives = 256/567 (45%), Gaps = 58/567 (10%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN--VKLNETTFST 89
G++ AR LFD+MP + +VSW + + +++ +++++L + R++ NE ++
Sbjct: 60 GRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLAS 119
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
L CAQ ++ G+Q+H + ++ G + +VG+ L+ YA I+ A VFD L N
Sbjct: 120 ALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKN 179
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ ++ GY Q A ++F KM +DG
Sbjct: 180 PVTWTAVITGYSQIGQGGVALELFGKM-----------------GLDGVR---------- 212
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P+ + S + AC+ LG G+ HG + E D S+ ALI+ YC C
Sbjct: 213 ------PDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRL 266
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN---------SI---- 316
A +++D +EN L + ++I G + +A +F +L++ SI
Sbjct: 267 SLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSC 326
Query: 317 -SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE--------MERNPVTWN 367
S ++ +G V+ + ++ S+I + + E E + +++N
Sbjct: 327 GSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYN 386
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+MI GY + A+ ++ MR ++ + TF L S +++ + +H +VK+
Sbjct: 387 AMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKS 446
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
++Y G+SL+D+YS+ + DA+A F+ + + ++ W A++ G + + G EAV LF
Sbjct: 447 GTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLF 506
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
+ + PN TFV +++ + G + + G ++D+ +
Sbjct: 507 NQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKC 566
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLS 574
G + E + + + D + W +++S
Sbjct: 567 GFIKEG-RLLFESTLGKDVICWNSMIS 592
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 218/450 (48%), Gaps = 33/450 (7%)
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFR-WM 208
L +L+L Y + + DA +F +MP K++V W IS +A+ GCE+ A+ LF +
Sbjct: 47 FLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQ--HGCEEDAVALFAAFQ 104
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
R SG PNE+ S +RACA+ A G+ VHG+ ++ G + + +G ALI Y
Sbjct: 105 RASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGC 164
Query: 269 FDGAMRVYDRL--ENPCLNASNSLINGLISMGRIEDAELIF----------NRLTEANSI 316
D AM V+D L +NP ++I G +G+ A +F +R A+++
Sbjct: 165 IDAAMLVFDALPVKNPV--TWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAV 222
Query: 317 SYNSMI---------KGYAVYGQVDDSKRLFEKMPHR----SIISLNTMISVIPEMERNP 363
S S + GYA V+ + + S +SL + E RN
Sbjct: 223 SACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCME-NRNL 281
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
V+W +MI+GY+QN+ +A+ ++ + + + + ++C L ++ QG+ +HAH
Sbjct: 282 VSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAH 341
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
+K ES+ YV SL+DMY++C + +A+A F +++ + ++ A++ GYS G + A
Sbjct: 342 AIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGA 401
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
+ +F M + P+ TFV +L + +I + G L + ++D+
Sbjct: 402 IDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDV 461
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ + +A+ M D V+W A++
Sbjct: 462 YSKFSLVEDAKAVFNLMH-NRDMVIWNAMI 490
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 193/429 (44%), Gaps = 61/429 (14%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
L AR +F+ + +S+N M+ GYS+ ++ + S M ++K + TF ++L
Sbjct: 366 HLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLG 425
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
V + +++ KQIH L++KSG + GS L+ Y+ +E+AK VF+ +H + ++
Sbjct: 426 VSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVI 485
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
W+ M+ G Q + E+A+KLF ++ SG
Sbjct: 486 WNAMIFGLAQN--------------------------------EQGEEAVKLFNQLQVSG 513
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
PNE+TF +++ + L + G+ H +IK G + D + ALI+ Y C
Sbjct: 514 L-APNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEG 572
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVY 328
+++ + NS+I+ G+ E+A +F + E N +++ ++ A
Sbjct: 573 RLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHA 632
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G VD+ R F+ M T ++ P E + S++ NL ++ +L+
Sbjct: 633 GLVDEGLRHFDFM--------KTKYAIEPGTEH----YASVV------NLFGRSGKLHAA 674
Query: 389 ---MRKLAIDRTRSTFSVLFHACSCLGSLQQGQL-LHAHLVKTPFESNVYVGTSLVDMYS 444
+ ++ I+ + + L AC G+++ G+ L+ P +S V S ++Y+
Sbjct: 675 KEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMS--NIYA 732
Query: 445 RCGSINDAQ 453
G +DAQ
Sbjct: 733 SRGLWSDAQ 741
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 158/363 (43%), Gaps = 33/363 (9%)
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+ H + G D + L+ Y A R++DR+ + L + S I+ G
Sbjct: 32 LAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHG 91
Query: 299 RIEDAELIFNRLTEAN---------------------SISYNSMIKGYAVYGQVDDSKRL 337
EDA +F A+ ++S+ + G AV +D + +
Sbjct: 92 CEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYV 151
Query: 338 FEKMP--HRSIISLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+ + + ++ + V + +NPVTW ++I+GY Q AL+L+ M +
Sbjct: 152 GTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGV 211
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
R + ACS LG L+ G+ H + + E++ V +L+D+Y +C ++ A+
Sbjct: 212 RPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARK 271
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F + + N+ +WT ++ GY + +EA+ +F + ++ P+ +L++C
Sbjct: 272 LFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAA 331
Query: 515 VNEGMKIFRSMKSYGVVPTLEH----YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
+ +G R + ++ + LE ++D+ + HL EA + + E DA+ +
Sbjct: 332 IWQG----RQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALA-EDDAISYN 386
Query: 571 ALL 573
A++
Sbjct: 387 AMI 389
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 6/172 (3%)
Query: 409 SCLGSLQQGQLL---HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
SCL + +LL HA V T ++++ L+ YS+ G + DA+ F + N+
Sbjct: 19 SCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLV 78
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQD--IVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+W + ++ ++ HG +AV LF PN L AC ++ V+ G ++
Sbjct: 79 SWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHG 138
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G+ + T +++L + G + A +P++ + V W A+++
Sbjct: 139 VAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVK-NPVTWTAVITG 189
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I + G + R LF+ + V+ WN+M+ Y++ + +E+L + M + V
Sbjct: 556 SNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGV 615
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY 115
+ N TF +LS CA L+D H +K+ Y
Sbjct: 616 EPNYVTFVGVLSACAHAG-LVDEGLRHFDFMKTKY 649
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 209/736 (28%), Positives = 350/736 (47%), Gaps = 136/736 (18%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N AI+ R G L AR+L +MP R VSWNT++ ++ E+L + M +
Sbjct: 76 VYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQ 135
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ T +++LS C + +L DG++ H L +K G + +FV +GLL Y C +
Sbjct: 136 EGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSV-- 193
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+DA +F MP + V +T ++ G A+
Sbjct: 194 -----------------------------ADAVRLFDGMPSPNEVSFTAMMGGLAQG-GA 223
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-----------KVVHGLLIK 246
+ AL+LF M +G + + SV+ ACA+ C G + +H L+++
Sbjct: 224 VDDALRLFARMSRTGIRV-DPVAVSSVLGACAQA---CAGDYNVARAIQLAQSIHALVVR 279
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG-------- 298
GF D+ +G +L++ Y D A++V++ L + + + N LI G +G
Sbjct: 280 KGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEV 339
Query: 299 ---------------------------RIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
+ A +F+++ + + ++N+++ GY
Sbjct: 340 LEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELH 399
Query: 332 DDSKRLFEKM------PHRSIISL---------------------------------NTM 352
++ LF +M P R+ +++ + +
Sbjct: 400 QETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGL 459
Query: 353 ISVIPE--------------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
I + + ER+ V WNSMISG ++L E+A MR+ + T
Sbjct: 460 IDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTE 519
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
S+++ + + C+ L S+ QG+ +HA ++K ++ NVYVG SL+DMY++ G+++DA+ F+
Sbjct: 520 SSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNC 579
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ N+ AW +++GY+ +G G +AV LFE ML P++ TF+ VL+ C +GLV+E
Sbjct: 580 MIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEA 639
Query: 519 MKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
+ F SM+S YG+ P +EHYTC++D L R+ E E I MP + D ++W LL+AC
Sbjct: 640 VTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACV 699
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
N E+GE +A+ +F LD K S YV+LSNIYA LG+ G +R ++ V K G
Sbjct: 700 VHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGY 759
Query: 638 SWIELNSRVHAFSVED 653
SW+ AF V D
Sbjct: 760 SWVNHKDGSRAFMVAD 775
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
S + HA ++ ++ ++ LV++YS G A +F ++ PNV ++ A ++
Sbjct: 25 SRSNAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAAIS 84
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
G + A L M ++ NA ++ V++A R+G E +++++ M G+ P
Sbjct: 85 AACRAGDLAAARDLLGRMPDR----NAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAP 140
Query: 533 T 533
T
Sbjct: 141 T 141
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 210/656 (32%), Positives = 330/656 (50%), Gaps = 56/656 (8%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
NG + AR LFD+MP + V WN ML GY K +D + + M R+ N TF+ +
Sbjct: 195 NGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACV 254
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
LSVCA + G Q+H LV+ SG E V + LL YA C + +A+R+
Sbjct: 255 LSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRL--------- 305
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
FD+ MPK D+V W +ISGY ++ ++A LF M
Sbjct: 306 -------------------FDM---MPKTDLVTWNGMISGYVQN-GFMDEASCLFHEMI- 341
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
S P+ TF S + + +GK +H +I+ G D + ALI+ Y C +
Sbjct: 342 SARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVE 401
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA 326
A +++D+ + ++I+G + G +A IF L + ANS++ S++ A
Sbjct: 402 MARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACA 461
Query: 327 VYGQVDDSKRLFE---KMPHRSIISLNTMI---------------SVIPEMERNPVTWNS 368
+ K L K H + + I + I +++ V WNS
Sbjct: 462 GLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNS 521
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
MI+ QN E+A+ L+ M + S AC+ L +L G+ +HA +++
Sbjct: 522 MITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGA 581
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
F S+++ ++L+DMYS+CG+++ A F ++ N +W +++ Y +HG +++ LF
Sbjct: 582 FRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFH 641
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
ML I P+ TF+ ++SAC AG V+EG+ FR M + G++ +EHY C+VDL GR+
Sbjct: 642 GMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRA 701
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L+EA I MP DA VWG LL AC N+E+ E A++ +F LD + YV+LS
Sbjct: 702 GRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLS 761
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
N++A G+W + IR + V+K PGCSWI++N+ H F DR++P + IY
Sbjct: 762 NVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIY 817
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 145/570 (25%), Positives = 261/570 (45%), Gaps = 64/570 (11%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A+N+F Q+ + WN M+ G++ +FD +L M ++ TF ++
Sbjct: 95 GAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVI 154
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C LNS+ G+ +H + G+E FVGS L+ FY+ I +A+ +FD + + +
Sbjct: 155 KACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGV 214
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
LW++ML GYV+ +A VF++M +
Sbjct: 215 LWNVMLNGYVKNGDWDNATGVFMEMRRT-------------------------------- 242
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
E PN TF V+ CA G +HGL++ G E D + L+ Y C
Sbjct: 243 -ETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFD 301
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAV 327
A R++D + L N +I+G + G +++A +F+ + A +SI+++S + +
Sbjct: 302 ARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSE 361
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMI-SVIPEM---------------ERNP---VTWNS 368
+ K + + R+ +SL+ + S + ++ +R P V +
Sbjct: 362 GATLRQGKEIHCYII-RNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTA 420
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACSCLGSLQQGQLLHAHLV 425
MISGYV N ++ AL+++ R L +R R+ T + + AC+ L +L G+ LH H++
Sbjct: 421 MISGYVLNGMNNNALEIF---RWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHIL 477
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K + YVG++++DMY++CG ++ A +F IS + W +++ S +G EA+
Sbjct: 478 KNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAID 537
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
LF M + + LSAC ++ G +I M L + ++D+
Sbjct: 538 LFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYS 597
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G+L A M E + V W ++++A
Sbjct: 598 KCGNLDLACRVFDTME-EKNEVSWNSIIAA 626
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/527 (23%), Positives = 227/527 (43%), Gaps = 90/527 (17%)
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+IL C + L G+Q H +L +G +G+ LL Y C +AK +F +L
Sbjct: 51 SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
W+ M+ G+ A + KM GC
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKML-------------------GCG--------- 142
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+P++YTF VI+AC L + G+VVH + GFE D +G +LI+FY
Sbjct: 143 -----TLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGC 197
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISY------ 318
A ++DR+ + N ++NG + G ++A +F + T NS+++
Sbjct: 198 IHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSV 257
Query: 319 -----------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
N+++ YA G + D++RLF+ MP +
Sbjct: 258 CASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDL--- 314
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
VTWN MISGYVQN ++A L+ M + TFS S
Sbjct: 315 --------------VTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLS 360
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+L+QG+ +H ++++ +V++ ++L+D+Y +C + A+ F + ++ TA
Sbjct: 361 EGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTA 420
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
+++GY +G+ + A+ +F +L++ + N+ T VL AC + G ++ + G
Sbjct: 421 MISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG 480
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+ + ++D+ + G L A + + + DAV W +++++C
Sbjct: 481 HGGSCYVGSAIMDMYAKCGRLDLAHQTFIGIS-DKDAVCWNSMITSC 526
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 140/539 (25%), Positives = 234/539 (43%), Gaps = 68/539 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N + + G L AR LFD MP +V+WN M+ GY + DE+ L M + +
Sbjct: 286 ANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARM 345
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
K + TFS+ L + ++ +L GK+IHC ++++G F+ S L+ Y C ++E A++
Sbjct: 346 KPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARK 405
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-E 199
+FD+ + P VV T +ISGY ++G
Sbjct: 406 IFDQ------------------------------RTPVDIVVC-TAMISGYV--LNGMNN 432
Query: 200 KALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
AL++FRW+ + E M N T SV+ ACA L A GK +HG ++K G +G A
Sbjct: 433 NALEIFRWLLQ--ERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSA 490
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEAN 314
+++ Y C D A + + + + NS+I G+ E+A +F ++ T+ +
Sbjct: 491 IMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYD 550
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS-----------------LNTMISVIP 357
+S ++ + A + K + M + S L+ V
Sbjct: 551 CVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFD 610
Query: 358 EM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
M E+N V+WNS+I+ Y + + +L L+ M I TF + AC G + +
Sbjct: 611 TMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDE 670
Query: 417 G-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGY 474
G + + + +VD++ R G +N+A +S+ SP+ W L+
Sbjct: 671 GIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGAC 730
Query: 475 SHHGLGSEAVLLFEIMLEQ--DIVP-NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
HG V L E+ D+ P N+ +V + + AG +KI MK GV
Sbjct: 731 RLHG----NVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGV 785
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 192/647 (29%), Positives = 326/647 (50%), Gaps = 55/647 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N ++ ++G+L A +F +MP R VSW M+ G ++ +F +++ M
Sbjct: 285 NSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFA 344
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ T + +LS CA + + G+++H V+K G V + +L+ Y C + E A+ V
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAV 404
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS-VDGCEK 200
F+ + + W++M+ Y M A +F M ++ +V W +I+GY ++ +DG
Sbjct: 405 FERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGM-- 462
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
ALK F M + P+ +T SV+ ACA L GK +H +++ G I ALI
Sbjct: 463 ALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALI 522
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR--LTEANSISY 318
Y G +E A I ++ + + N IS+
Sbjct: 523 STYA-------------------------------KSGSVETARRIMDQAVVADLNVISF 551
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
++++GY G ++ +F+ M +R +I+ W +MI GY QN
Sbjct: 552 TALLEGYVKLGDTKQAREIFDIMNNRDVIA-----------------WTAMIVGYHQNGQ 594
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+++A++L+ +M + + T + + AC+ L L G+ +H +++ E +V V +
Sbjct: 595 NDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNA 654
Query: 439 LVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
++ +Y+R GS+ A+ F I WT+++ + HGLG +AV+LFE M+ + P
Sbjct: 655 IITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKP 714
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
+ T+VGVLSAC AG V++G + + M++ +G+VP + HY C+VDL R+G L EA EF
Sbjct: 715 DHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEF 774
Query: 557 IKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
I+ MP+ D VVWG+LL+AC N ++ E AA K+ +D AY L+N+Y+ G+W
Sbjct: 775 IQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRW 834
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
I K VKK+ G SW + +VH F +D +P + IY
Sbjct: 835 NDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIY 881
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 232/501 (46%), Gaps = 34/501 (6%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN------CFEIEEAKR 140
++ +L +C + G+ IH +K+G ++ + LL +YA+ CF EA+
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFR--EARC 269
Query: 141 VFDELH--EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+FD++ N W+ +L Y + + DA VF +MP +D V WT +I G +S
Sbjct: 270 LFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFW 329
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+ A+K F M G P+++T +V+ +CA + A G+ VH ++K G + +
Sbjct: 330 D-AVKTFLDMVSEG-FAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANS 387
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
++ Y C + A V++R++ +++ N +++ GR+E A +F + E + +S+
Sbjct: 388 VLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSW 447
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N++I GY G + + F +M S ME + T S++S +
Sbjct: 448 NTIIAGYNQNGLDGMALKFFSRMLSAS------------SMEPDAFTVTSVLSACANLRM 495
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+ Q++ + + + + + L + GS++ + + V NV T+
Sbjct: 496 LKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADL--NVISFTA 553
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L++ Y + G A+ F +++ +V AWTA++ GY +G EA+ LF M+ PN
Sbjct: 554 LLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPN 613
Query: 499 AATFVGVLSACVRAGLVNEGMKI----FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
+ T VLSAC ++ G +I RS++ V + ++ + RSG + A
Sbjct: 614 SHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVS----NAIITVYARSGSVPLAR 669
Query: 555 EFIKDMPIELDAVVWGALLSA 575
+ + + W +++ A
Sbjct: 670 RVFDQICWRKETITWTSMIVA 690
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 82/184 (44%), Gaps = 42/184 (22%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLV 72
QE + +N IT R+G + AR +FDQ+ R ++W +M+ ++ ++++ L
Sbjct: 645 QEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLF 704
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M R VK + T+ +LS CA +G+
Sbjct: 705 EEMVRVGVKPDHITYVGVLSACAH----------------AGF----------------- 731
Query: 133 FEIEEAKRVFDELHEDNELL-----WSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTK 186
+++ KR ++++ ++ ++ ++ M+ + + L+++A + +MP D VVW
Sbjct: 732 --VDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGS 789
Query: 187 LISG 190
L++
Sbjct: 790 LLAA 793
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 214/680 (31%), Positives = 350/680 (51%), Gaps = 93/680 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A LFD+MP+ VS+ T+ G+S+ +F + L+ + R ++N+ F+T+L
Sbjct: 52 GFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLL 111
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ ++ +H V K G++ FVG+ L+ Y+ C ++ A++VFD ++
Sbjct: 112 KLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIY----- 166
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRE 210
KD+V WT +++ YA++ C E +L LF MR
Sbjct: 167 --------------------------FKDMVSWTGMVACYAENY--CHEDSLLLFCQMRI 198
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G PN +T + +++C L AF GK VHG +K ++ D +G AL+E Y
Sbjct: 199 MGYR-PNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIA 257
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----------------- 313
A + ++ + L + +I+ + ++A +F R+ ++
Sbjct: 258 EAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQAC 317
Query: 314 -----------------------NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
N N+++ YA G++++S +LF
Sbjct: 318 ASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTG---------- 367
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
E+N V WN++I GYVQ EKAL L+ M L I T T+S + A +
Sbjct: 368 -------STEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASAS 420
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L +L+ G+ +H+ +KT + + V SL+DMY++CG I+DA+ +F + + +W AL
Sbjct: 421 LVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNAL 480
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYG 529
+ GYS HGLG EA+ LF++M + + PN TFVGVLSAC AGL+++G F+SM + YG
Sbjct: 481 ICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYG 540
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ P +EHYTC+V LLGRSG EA + I ++P + +VW ALL AC N+++G+ A
Sbjct: 541 IEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCA 600
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
Q++ ++ + + +V+LSN+YA +W +RK + +VKK+PG SW+E VH F
Sbjct: 601 QRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYF 660
Query: 650 SVEDRNNPNCNVIYATLEHL 669
+V D ++PN +I+A LE L
Sbjct: 661 TVGDTSHPNIKLIFAMLEWL 680
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 155/317 (48%), Gaps = 38/317 (11%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL-NETTFS 88
++G++ A+ F++MP ++ W+ M+ Y++ K E+L L M +S+V + N TF+
Sbjct: 252 KSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFA 311
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++L CA L L G QIH VLK G + FV + L+ YA C EIE + ++F E
Sbjct: 312 SVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEK 371
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
NE+ W+ ++VGYVQ DG EKAL LF M
Sbjct: 372 NEVAWNTIIVGYVQLG-------------------------------DG-EKALNLFSNM 399
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ P E T+ SV+RA A L A G+ +H L IK + D + +LI+ Y C
Sbjct: 400 L-GLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGR 458
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS----ISYNSMIKG 324
D A +D+++ + N+LI G G +A +F+ + ++NS +++ ++
Sbjct: 459 IDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSA 518
Query: 325 YAVYGQVDDSKRLFEKM 341
+ G +D + F+ M
Sbjct: 519 CSNAGLLDKGRAHFKSM 535
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 215/515 (41%), Gaps = 99/515 (19%)
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
GK +HC +LK G + L F N ++L YV
Sbjct: 22 GKSLHCHILKHG--------ASLDLFAQN-----------------------ILLNTYVH 50
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
+ DA +F +MP + V + L G+++S L R RE E N++ F
Sbjct: 51 FGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYE--VNQFVFT 108
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL--- 279
++++ + VH + K G + D +G ALI+ Y C D A +V+D +
Sbjct: 109 TLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFK 168
Query: 280 -------------ENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN------------ 314
EN C S L + MG + I L N
Sbjct: 169 DMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVH 228
Query: 315 ----SISYN-------SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP 363
+ Y+ ++++ Y G++ ++++ FE+MP +I
Sbjct: 229 GCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIP--------------- 273
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHA 422
W+ MIS Y Q++ ++AL+L+ MR+ ++ + TF+ + AC+ L L G +H+
Sbjct: 274 --WSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHS 331
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
++K +SNV+V +L+D+Y++CG I ++ F+ + N AW ++ GY G G +
Sbjct: 332 CVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEK 391
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI----FRSMKSYGVVPTLEHYT 538
A+ LF ML DI P T+ VL A + G +I ++M + V
Sbjct: 392 ALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVA----N 447
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
++D+ + G + +A M + D V W AL+
Sbjct: 448 SLIDMYAKCGRIDDARLTFDKMDKQ-DEVSWNALI 481
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 121/267 (45%), Gaps = 40/267 (14%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER----NPVTWNSMISGYV 374
N ++ Y +G ++D+ +LF++MP + +S T+ + + GY
Sbjct: 42 NILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYE 101
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
N ++ T+ KL + + +CL +HA++ K +++ +
Sbjct: 102 VNQF------VFTTLLKLLVSMDLAD--------TCLS-------VHAYVYKLGHQADAF 140
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
VGT+L+D YS CG+++ A+ F I ++ +WT ++ Y+ + +++LLF M
Sbjct: 141 VGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMG 200
Query: 495 IVPNAATFVGVLSAC-----VRAGLVNEG--MKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
PN T L +C + G G +K+ Y + LE YT +S
Sbjct: 201 YRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYT-------KS 253
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLS 574
G + EA++F ++MP + D + W ++S
Sbjct: 254 GEIAEAQQFFEEMPKD-DLIPWSLMIS 279
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
++++ +T+ +++++ N I + G++ AR FD+M + VSWN ++CGYS
Sbjct: 429 QIHSLTIKTMYNKDSVV--ANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSI 486
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGK-QIHCLVLKSGYE-CFE 119
E+L+L M +SN K N+ TF +LS C+ L G+ ++ G E C E
Sbjct: 487 HGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIE 546
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDEL-HEDNELLWSLML 157
+ +++ + +EA ++ E+ + + ++W +L
Sbjct: 547 HY-TCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALL 584
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 199/661 (30%), Positives = 333/661 (50%), Gaps = 90/661 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G LV AR LF++ PI+ ++W++++ GY K E L S M K ++ T ++L
Sbjct: 82 GNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVL 141
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ L+ L GK IHC +K E FV +GL+ Y+ C + EA+ +F L +
Sbjct: 142 RACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPD---- 197
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+K+ V WT +++GYA++ + KA++ F+ MR
Sbjct: 198 --------------------------RKNYVQWTAMLTGYAQNGESL-KAIQCFKEMRNQ 230
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G N +TF S++ AC + A+ G+ VHG +I GF + + AL++ Y C
Sbjct: 231 GME-SNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLAS 289
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----NRLTEANSISYNSMIKGYAV 327
A + D +E + NS+I G ++ G +E+A ++F NR + +Y S++K A
Sbjct: 290 ARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLAS 349
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNSM 369
+ + + + T+ + + +M +++ ++W S+
Sbjct: 350 CKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSL 409
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
++GYV N HEKALQL+ MR +D + + +F AC+ L ++ G+ +HA+ +K+
Sbjct: 410 VTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSA 469
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
S + SL+ MY++CG + DA F S+ + NV +WTA++ GY+ +
Sbjct: 470 GSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQN------------ 517
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSG 548
GLV G F SM K YG+ P +HY C++DLLGR+G
Sbjct: 518 -----------------------GLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAG 554
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
++EAE + M +E DA +W +LLSAC N+E+GERA + + L+ YV+LSN
Sbjct: 555 KINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSN 614
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+++V G+W IR+ + + + K+PG SWIE+ S+VH F EDR++P IY+ ++
Sbjct: 615 MFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDE 674
Query: 669 L 669
+
Sbjct: 675 M 675
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 142/279 (50%), Gaps = 16/279 (5%)
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME------------ 360
++++ N ++ + G+VD++++LF++MP+R + N MIS +
Sbjct: 35 SSNLDSNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNET 94
Query: 361 --RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+N +TW+S++SGY +N + L+ + M ++ T + ACS L L G+
Sbjct: 95 PIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGK 154
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS-PNVAAWTALMNGYSHH 477
++H + +K E+N++V T LVDMYS+C + +A+ F S+ N WTA++ GY+ +
Sbjct: 155 MIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQN 214
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
G +A+ F+ M Q + N TF +L+AC G ++ + G P +
Sbjct: 215 GESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQ 274
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+ +VD+ + G L A + M I+ D V W +++ C
Sbjct: 275 SALVDMYAKCGDLASARMILDTMEID-DVVCWNSMIVGC 312
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 199/663 (30%), Positives = 334/663 (50%), Gaps = 90/663 (13%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
+T E + S K + + L AR +FDQ+P + S+N ML YS + ++L L
Sbjct: 55 VTPENYLAS--KLVALYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLHNRHGDALDL 112
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQ--LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY 129
S++ SN+ +N + + +L + L+ + GK++H VL++G++ FV + L+ +Y
Sbjct: 113 FSSLASSNL-VNNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFDADVFVENALITYY 171
Query: 130 ANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
+ C++++ +++VFD +M K+DVV W +IS
Sbjct: 172 SKCYDLDLSRKVFD-------------------------------RMTKRDVVSWNSMIS 200
Query: 190 GYAKS--VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
GY++ + C+ L+R M + PN T SV++AC + G VH ++
Sbjct: 201 GYSQGGLYEDCKT---LYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDN 257
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
E D S+ ALI Y C G ++ A +F
Sbjct: 258 QVEIDISVCNALIGLYAKC-------------------------------GSLDYARELF 286
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
+ ++E + ++Y ++I G ++G VD S LF M + I+S TWN
Sbjct: 287 DEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQ-ILS----------------TWN 329
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
++I+G VQNN HE L L M+ L T S + + SL+ G+ +H++ +K
Sbjct: 330 AVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKI 389
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ N+YV T+++DMY++ G + AQ F ++ WTA+++ Y+ HG + A+ LF
Sbjct: 390 GYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLF 449
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
ML+Q I P+ TF VL+AC G+V++ +IF SM K YG+ P +EHY CVV LG+
Sbjct: 450 HEMLKQGIQPDPVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGK 509
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+ L EA+EF+ MPIE A VWGALL ++E+G+ +F ++ + YVI+
Sbjct: 510 ARRLSEAKEFVSKMPIEPSAKVWGALLHGASISSDVELGKSVCDYLFEIEPENTGNYVIM 569
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
+N+Y+ G+W + ++R+R+ + ++K PG SWIE + + +F D N I+ L
Sbjct: 570 ANLYSQAGRWKEADEVRERMNKVGLQKIPGSSWIETSEGLRSFIATDTCTENVEEIHVIL 629
Query: 667 EHL 669
+ L
Sbjct: 630 KGL 632
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
L H + L Q + LHA L+ Y+ + LV +YS+ + A+ F I N
Sbjct: 30 LLHHLTELRLPLQAKQLHARLILFSVTPENYLASKLVALYSKTNHLAFARYVFDQIPHKN 89
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
++ A++ YS H +A+ LF + ++V N
Sbjct: 90 TFSYNAMLISYSLHNRHGDALDLFSSLASSNLVNN 124
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 200/659 (30%), Positives = 325/659 (49%), Gaps = 90/659 (13%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R L AR +F++MP+R VVSWN+++ GY+ ++E+L + V + T S+
Sbjct: 221 RFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSS 280
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C L S+ +G IH L+ K G + V +GLL Y + + +R+FD++ +
Sbjct: 281 VLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRD 340
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ GY Q L ++ +F++M + F+
Sbjct: 341 AVSWNTMICGYSQVGLYEESIKLFMEMVNQ-------------------------FK--- 372
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P+ T S+++AC LG GK VH +I G+E D + LI Y C
Sbjct: 373 ------PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNL 426
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---TEANSISY-------- 318
+ V+ ++ + NS+IN I G ++A +F + + +S++Y
Sbjct: 427 LASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMST 486
Query: 319 ---------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
N+++ YA G++ DS ++FE M R II
Sbjct: 487 QLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDII---- 542
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
TWN++I+ V + L++ MR + +T + CS L
Sbjct: 543 -------------TWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLL 589
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
+ +QG+ +H + K ES+V VG L++MYS+CGS+ ++ F + + +V WTAL+
Sbjct: 590 AAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALI 649
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGV 530
+ +G G +AV F M IVP+ FV ++ AC +GLV EG+ F M K Y +
Sbjct: 650 SACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKI 709
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
P +EHY CVVDLL RS L +AE+FI MP++ D+ +WGALLSAC + E+ +R ++
Sbjct: 710 EPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSE 769
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
++ L+ YV++SN+YA LGKW + IRK + +KKDPGCSW+E+ ++V+ F
Sbjct: 770 RIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVF 828
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 142/570 (24%), Positives = 262/570 (45%), Gaps = 58/570 (10%)
Query: 45 PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
P V WN+++ + F E+LSL S R ++ + TF ++++ CA L K
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194
Query: 105 QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
IH VL G+ ++G+ L+ Y ++++A++VF+E
Sbjct: 195 SIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEE-------------------- 234
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDS 223
MP +DVV W LISGY + +G +AL+++ R G +P+ YT S
Sbjct: 235 -----------MPLRDVVSWNSLISGY--NANGYWNEALEIYYRFRNLGV-VPDSYTMSS 280
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
V+RAC LG+ EG ++HGL+ K G + D + L+ YC R++D++
Sbjct: 281 VLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRD 340
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLT---EANSISYNSMIKGYAVYGQVDDSKRLFEK 340
+ N++I G +G E++ +F + + + ++ S+++ G ++ K + +
Sbjct: 341 AVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDY 400
Query: 341 MPHRSIISLNTMISVIPEME------------------RNPVTWNSMISGYVQNNLHEKA 382
M T +++ M ++ V+WNSMI+ Y+QN ++A
Sbjct: 401 MITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEA 460
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
++L+ M K + T+ +L + LG L G+ LH L K F SN+ V +LVDM
Sbjct: 461 MKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDM 519
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
Y++CG + D+ F ++ + ++ W ++ H + + + M + + P+ AT
Sbjct: 520 YAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATM 579
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+ +L C +G +I + G+ + ++++ + G L + + K M
Sbjct: 580 LSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKT 639
Query: 563 ELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+ D V W AL+SAC + + RA +M
Sbjct: 640 K-DVVTWTALISACGMYGEGKKAVRAFGEM 668
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 206/480 (42%), Gaps = 61/480 (12%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
++N I + G L+ ++ +F M + VSWN+M+ Y + FDE++ L M ++
Sbjct: 411 TASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM-KT 469
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+VK + T+ +LS+ QL L GK++HC + K G+ V + L+ YA C E+ ++
Sbjct: 470 DVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDS 529
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+VF+ M +D++ W +I+ S D C
Sbjct: 530 LKVFEN-------------------------------MKARDIITWNTIIASCVHSED-C 557
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
L++ MR G P+ T S++ C+ L A +GK +HG + K G E D +G
Sbjct: 558 NLGLRMISRMRTEGVT-PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNV 616
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----N 314
LIE Y C + + +V+ ++ + +LI+ G + A F + A +
Sbjct: 617 LIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPD 676
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
+++ ++I + G V++ F +M I P +E + ++
Sbjct: 677 HVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIE--------PRIEH----YACVVDLLS 724
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNV 433
++ L +KA ++M + S + L AC G + Q + +++ P ++
Sbjct: 725 RSALLDKAEDFILSM---PLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGY 781
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVA-----AWTALMNGYSHHGLGSEAVLLFE 488
YV S ++Y+ G + ++ SI + + +W + N G G++ FE
Sbjct: 782 YVLVS--NVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFE 839
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
+S+I ++ V S +L K H + + + + N WNS+I N L
Sbjct: 95 HSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGL 154
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+AL LY +++ + TF + +AC+ L + + +H ++ F S++Y+G +
Sbjct: 155 FSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNA 214
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+DMY R ++ A+ F + +V +W +L++GY+ +G +EA+ ++ +VP+
Sbjct: 215 LIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPD 274
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
+ T VL AC G V EG I ++ G+ + ++ + + L +
Sbjct: 275 SYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFD 334
Query: 559 DMPIELDAVVWGALL 573
M + DAV W ++
Sbjct: 335 KMVLR-DAVSWNTMI 348
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV +N + + G++ + +F+ M R +++WNT++ + L ++S M
Sbjct: 510 IVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRT 569
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V + T +IL VC+ L + GK+IH + K G E VG+ L+ Y+ C +
Sbjct: 570 EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLR- 628
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
++F VF M KDVV WT LIS +G
Sbjct: 629 ------------------------------NSFQVFKLMKTKDVVTWTALISACGMYGEG 658
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+KA++ F M +G +P+ F ++I AC+ G EG
Sbjct: 659 -KKAVRAFGEMEAAGI-VPDHVAFVAIIFACSHSGLVEEG 696
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 211/685 (30%), Positives = 336/685 (49%), Gaps = 95/685 (13%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
A LFDQM R SW ++ G ++ F + M + ++ +S IL +C
Sbjct: 123 AACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICI 182
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L+S+ G +H ++ G+ FV + LL YA EIE
Sbjct: 183 GLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIE------------------- 223
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
D++ VF M + +VV W +I+G+ S D A LF +R GE +
Sbjct: 224 ------------DSYKVFNTMTEVNVVSWNAMITGFT-SNDLYLDAFDLF--LRMMGEGV 268
Query: 216 -PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P+ TF V +A L + K V G ++ G + + +G ALI+ C + A
Sbjct: 269 TPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARS 328
Query: 275 VYDRLENPC-LNAS-NSLINGLISMGRIEDAELIFNRLT--------------------- 311
+++ C NA N++I+G + G E A +F ++
Sbjct: 329 IFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAAL 388
Query: 312 ------------------EANSISY-NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
E N +S N++ YA G ++D +++F +M R +IS
Sbjct: 389 KCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLIS---- 444
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
W S+++ Y Q + +KA++++ MR I + TFS + +C+ L
Sbjct: 445 -------------WTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLC 491
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
L+ GQ +H + K + + + ++LVDMY++CG + DA+ F+ IS+ + +WTA++
Sbjct: 492 LLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIA 551
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVV 531
G++ HG+ +A+ LF M++ + PNA TF+ VL AC GLV EG++ F+ MK +YG+V
Sbjct: 552 GHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLV 611
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P +EHY C+VDLL R GHL++A EFI MP+E + +VW LL AC N+E+GE AAQK
Sbjct: 612 PEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQK 671
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+ + + YV+LSN Y G + + +R + VKK+PGCSWI +N +H F
Sbjct: 672 ILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYA 731
Query: 652 EDRNNPNCNVIYATLEHLTANLNSV 676
D+ +P + IYA LE L L S+
Sbjct: 732 GDQQHPEKDKIYAKLEELKLKLISL 756
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/526 (21%), Positives = 230/526 (43%), Gaps = 61/526 (11%)
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE--FVGSGLLFFYANCFE 134
+++ L +L C L K +H +LKS + + + + Y+ C +
Sbjct: 61 KTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSD 120
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I+ A R+FD++ + N W++++ G + L D F+ F +M + +
Sbjct: 121 IDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGI------------- 167
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
P+++ + +++ C L + G +VH ++ GF
Sbjct: 168 --------------------FPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTF 207
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---- 310
+ AL+ Y + + + +V++ + + + N++I G S DA +F R+
Sbjct: 208 VSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEG 267
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRL----------FEKMPHRSIISLNTMISVIPEME 360
++ ++ + K + V+ +K + + ++I +N+ + E
Sbjct: 268 VTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEAR 327
Query: 361 ----------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
R WN+MISGY+++ +EKAL+L+ M + I T+ +F+A +
Sbjct: 328 SIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAA 387
Query: 411 LGSLQQGQLLHAHLVKTPFESN-VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
L L G+ +HA +K+ E N V + ++ + Y++CGS+ D + F+ + ++ +WT+
Sbjct: 388 LKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTS 447
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
L+ YS +A+ +F M + I PN TF VL +C L+ G ++ + G
Sbjct: 448 LVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVG 507
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + +VD+ + G L +A++ + D V W A+++
Sbjct: 508 LDMDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAG 552
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 176/422 (41%), Gaps = 76/422 (18%)
Query: 211 SGENMPNEYTFD------------SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG-- 256
SG PN D ++R C + K VHG L+K F S+
Sbjct: 49 SGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLL 108
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL---------------------- 294
+ Y C D A R++D++ + LI GL
Sbjct: 109 NHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIF 168
Query: 295 ------------------ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
I +G + A+++ T +S +++ YA +++DS +
Sbjct: 169 PDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVS-TALLNMYAKLQEIEDSYK 227
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F NTM V N V+WN+MI+G+ N+L+ A L++ M +
Sbjct: 228 VF-----------NTMTEV------NVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTP 270
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
TF + A L + + + + + ++ +SN VGT+L+DM S+CGS+ +A++ F
Sbjct: 271 DAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIF 330
Query: 457 SS--ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
+S I+ A W A+++GY G +A+ LF M + DI + T+ V +A
Sbjct: 331 NSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKC 390
Query: 515 VNEGMKIF-RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
++ G K+ R++KS V + V + + G L + + M + D + W +L+
Sbjct: 391 LSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRME-DRDLISWTSLV 449
Query: 574 SA 575
+A
Sbjct: 450 TA 451
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 119/218 (54%), Gaps = 4/218 (1%)
Query: 19 VSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
VS + A+ + G L R +F++M R ++SW +++ YS+ +++D+++ + S M
Sbjct: 411 VSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRA 470
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ N+ TFS++L CA L L G+Q+H ++ K G + + + S L+ YA C + +
Sbjct: 471 EGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGD 530
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV--VWTKLISGYAKSV 195
AK+VF+ + + + W+ ++ G+ Q ++ DA +F +M + V T L +A S
Sbjct: 531 AKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSH 590
Query: 196 DG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
G E+ L+ F+ M+++ +P + ++ +R+G
Sbjct: 591 GGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVG 628
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 211/685 (30%), Positives = 336/685 (49%), Gaps = 95/685 (13%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
A LFDQM R SW ++ G ++ F + M + ++ +S IL +C
Sbjct: 123 AACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICI 182
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L+S+ G +H ++ G+ FV + LL YA EIE
Sbjct: 183 GLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIE------------------- 223
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
D++ VF M + +VV W +I+G+ S D A LF +R GE +
Sbjct: 224 ------------DSYKVFNTMTEVNVVSWNAMITGFT-SNDLYLDAFDLF--LRMMGEGV 268
Query: 216 -PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P+ TF V +A L + K V G ++ G + + +G ALI+ C + A
Sbjct: 269 TPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARS 328
Query: 275 VYDRLENPC-LNAS-NSLINGLISMGRIEDAELIFNRLT--------------------- 311
+++ C NA N++I+G + G E A +F ++
Sbjct: 329 IFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAAL 388
Query: 312 ------------------EANSISY-NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
E N +S N++ YA G ++D +++F +M R +IS
Sbjct: 389 KCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLIS---- 444
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
W S+++ Y Q + +KA++++ MR I + TFS + +C+ L
Sbjct: 445 -------------WTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLC 491
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
L+ GQ +H + K + + + ++LVDMY++CG + DA+ F+ IS+ + +WTA++
Sbjct: 492 LLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIA 551
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVV 531
G++ HG+ +A+ LF M++ + PNA TF+ VL AC GLV EG++ F+ MK +YG+V
Sbjct: 552 GHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLV 611
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P +EHY C+VDLL R GHL++A EFI MP+E + +VW LL AC N+E+GE AAQK
Sbjct: 612 PEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQK 671
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+ + + YV+LSN Y G + + +R + VKK+PGCSWI +N +H F
Sbjct: 672 ILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYA 731
Query: 652 EDRNNPNCNVIYATLEHLTANLNSV 676
D+ +P + IYA LE L L S+
Sbjct: 732 GDQQHPEKDKIYAKLEELKLKLISL 756
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/526 (21%), Positives = 230/526 (43%), Gaps = 61/526 (11%)
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE--FVGSGLLFFYANCFE 134
+++ L +L C L K +H +LKS + + + + Y+ C +
Sbjct: 61 KTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSD 120
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I+ A R+FD++ + N W++++ G + L D F+ F +M + +
Sbjct: 121 IDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGI------------- 167
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
P+++ + +++ C L + G +VH ++ GF
Sbjct: 168 --------------------FPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTF 207
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---- 310
+ AL+ Y + + + +V++ + + + N++I G S DA +F R+
Sbjct: 208 VSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEG 267
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRL----------FEKMPHRSIISLNTMISVIPEME 360
++ ++ + K + V+ +K + + ++I +N+ + E
Sbjct: 268 VTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEAR 327
Query: 361 ----------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
R WN+MISGY+++ +EKAL+L+ M + I T+ +F+A +
Sbjct: 328 SIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAA 387
Query: 411 LGSLQQGQLLHAHLVKTPFESN-VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
L L G+ +HA +K+ E N V + ++ + Y++CGS+ D + F+ + ++ +WT+
Sbjct: 388 LKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTS 447
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
L+ YS +A+ +F M + I PN TF VL +C L+ G ++ + G
Sbjct: 448 LVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVG 507
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + +VD+ + G L +A++ + D V W A+++
Sbjct: 508 LDMDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAG 552
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 176/422 (41%), Gaps = 76/422 (18%)
Query: 211 SGENMPNEYTFD------------SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG-- 256
SG PN D ++R C + K VHG L+K F S+
Sbjct: 49 SGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLL 108
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL---------------------- 294
+ Y C D A R++D++ + LI GL
Sbjct: 109 NHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIF 168
Query: 295 ------------------ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
I +G + A+++ T +S +++ YA +++DS +
Sbjct: 169 PDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVS-TALLNMYAKLQEIEDSYK 227
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F NTM V N V+WN+MI+G+ N+L+ A L++ M +
Sbjct: 228 VF-----------NTMTEV------NVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTP 270
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
TF + A L + + + + + ++ +SN VGT+L+DM S+CGS+ +A++ F
Sbjct: 271 DAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIF 330
Query: 457 SS--ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
+S I+ A W A+++GY G +A+ LF M + DI + T+ V +A
Sbjct: 331 NSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKC 390
Query: 515 VNEGMKIF-RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
++ G K+ R++KS V + V + + G L + + M + D + W +L+
Sbjct: 391 LSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRME-DRDLISWTSLV 449
Query: 574 SA 575
+A
Sbjct: 450 TA 451
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 119/218 (54%), Gaps = 4/218 (1%)
Query: 19 VSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
VS + A+ + G L R +F++M R ++SW +++ YS+ +++D+++ + S M
Sbjct: 411 VSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRA 470
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ N+ TFS++L CA L L G+Q+H ++ K G + + + S L+ YA C + +
Sbjct: 471 EGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGD 530
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV--VWTKLISGYAKSV 195
AK+VF+ + + + W+ ++ G+ Q ++ DA +F +M + V T L +A S
Sbjct: 531 AKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSH 590
Query: 196 DG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
G E+ L+ F+ M+++ +P + ++ +R+G
Sbjct: 591 GGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVG 628
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 220/675 (32%), Positives = 341/675 (50%), Gaps = 83/675 (12%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
+L +A LFD+MP+R VSWNTM+ G+ + S ++ M +L+ TF ++L
Sbjct: 48 ELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLK 107
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
A G+Q+H +++K GY + GS LL YA C ++E
Sbjct: 108 GIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE---------------- 151
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
DA+ F+ + K + V W +I+GYA++ D E A L M + G
Sbjct: 152 ---------------DAYLSFLSISKHNTVSWNAMINGYAQAGDR-ETAFWLLDCMEQEG 195
Query: 213 ENMPNEYTFDSVIRACARLGAFCE-GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
E + ++ T+ ++ FC +HG +IK G E ++ ALI Y C + D
Sbjct: 196 EKV-DDGTYAPLLPLLDD-ADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDD 253
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA-------ELIFNRLT-------EANSIS 317
A R++D S++ I L++ + A +L F L E + S
Sbjct: 254 AKRIFD---------SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYS 304
Query: 318 YNSMI----------KGYAVYGQVDDSKRLFEK-MPHRSII----------SLNTMISVI 356
Y S+I G +++G V KR FE+ +P + + S+ + +
Sbjct: 305 YTSIISACFNENISNNGRSLHGLV--IKRGFEQSVPISNALISMYLKSDYGSMKEALCIF 362
Query: 357 PEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
+E ++ V+WNS+++G Q E A++ ++ MR A+D +FS + +CS L + Q
Sbjct: 363 ESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQ 422
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
GQ +H +K ESN +V +SL+ MYS+CG I DA+ SF S + W ALM GY+
Sbjct: 423 LGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYA 482
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTL 534
HG + A+ LF +M + + + TFV VL+AC GLV +G K R M+S YGV P +
Sbjct: 483 QHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRM 542
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY C VDL GRSG L EA+ I++MP + D VW L AC N+E+ + A +
Sbjct: 543 EHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLE 602
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
++ + YV+LSN+Y L +W +K +++ + VKK PG SWIE+N+ VHAF +D
Sbjct: 603 MEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDH 662
Query: 655 NNPNCNVIYATLEHL 669
++P+C IY LE L
Sbjct: 663 SHPSCQQIYFLLEVL 677
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 201/461 (43%), Gaps = 65/461 (14%)
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
+L GY +C + A +F +MP +D V W +I+G+ + E + + R MR G +
Sbjct: 39 ILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHI-NCGNLEASWDVLRCMRSCGFEL 97
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+ YTF S+++ A G F G+ VH ++IK G+ + G AL++ Y CE + A
Sbjct: 98 -DRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLS 156
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDA-------------------------------- 303
+ + + N++ING G E A
Sbjct: 157 FLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFC 216
Query: 304 --------ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
++I + L N++ N++I Y+ G +DD+KR+F+
Sbjct: 217 NLTSQLHGKIIKHGLELVNTMC-NALITSYSKCGSLDDAKRIFDSSAGI----------- 264
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
R+ VTWNS+++ Y+ + + A +L + M++ + +++ + AC
Sbjct: 265 -----RDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISN 319
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMY--SRCGSINDAQASFSSISSPNVAAWTALMNG 473
G+ LH ++K FE +V + +L+ MY S GS+ +A F S+ + +W +++ G
Sbjct: 320 NGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTG 379
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT 533
S G +AV F M + + +F VL +C G +I YG+
Sbjct: 380 LSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESN 439
Query: 534 LEHYTCVVDLLGRSGHLHEA----EEFIKDMPIELDAVVWG 570
+ ++ + + G + +A EE K+ I +A+++G
Sbjct: 440 EFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFG 480
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 17/265 (6%)
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
T A+ + N+++ GY ++ + LF++MP R + V+WN+MI
Sbjct: 29 TIADVYTCNNILNGYWKCKELRSADVLFDEMPMR-----------------DSVSWNTMI 71
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
+G++ E + + MR + R TF + + G GQ +H+ ++K +
Sbjct: 72 AGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYA 131
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
NVY G++L+DMY++C + DA SF SIS N +W A++NGY+ G A L + M
Sbjct: 132 ENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCM 191
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
++ + T+ +L A N ++ + +G+ ++ + G L
Sbjct: 192 EQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSL 251
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
+A+ D V W +LL+A
Sbjct: 252 DDAKRIFDSSAGIRDLVTWNSLLAA 276
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 184/438 (42%), Gaps = 88/438 (20%)
Query: 22 NKAITECGRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N IT + G L A+ +FD IR +V+WN++L Y ++ D + L+ M
Sbjct: 239 NALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGF 298
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY--ANCFEIEEA 138
+ + ++++I+S C N +G+ +H LV+K G+E + + L+ Y ++ ++EA
Sbjct: 299 EPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEA 358
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+F+ L + + W+ +L G Q
Sbjct: 359 LCIFESLEFKDRVSWNSILTGLSQ--------------------------------TGSS 386
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
E A+K F MR + ++ + Y+F +V+R+C+ L F G+ +H L +K G E +E + +
Sbjct: 387 EDAVKSFLHMRSAAMDI-DHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSS 445
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
LI Y C G IEDA F ++ +SI++
Sbjct: 446 LIFMYSKC-------------------------------GIIEDARRSFEEASKNSSITW 474
Query: 319 NSMIKGYAVYGQVDDSKRLF-------EKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
N+++ GYA +GQ + + LF KM H + +++ T S I +E+ M S
Sbjct: 475 NALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMES 534
Query: 372 GY-VQNNLHEKALQLYMTMRKLAIDRTR------------STFSVLFHACSCLGSLQQGQ 418
Y V + A + + R ++ + + + AC G+++
Sbjct: 535 DYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELAC 594
Query: 419 LLHAHLVK-TPFESNVYV 435
+ HL++ P E YV
Sbjct: 595 QVAGHLLEMEPEEHCTYV 612
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 6/186 (3%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR F++ + ++WN ++ GY++ + + +L L M VK++ TF +L
Sbjct: 454 GIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVL 513
Query: 92 SVCAQLNSLIDG-KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL-HEDN 149
+ C+ + + G K + C+ G + + Y +EEAK + +E+ + +
Sbjct: 514 TACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPD 573
Query: 150 ELLWSLMLVGYVQCNLMSDAFDV---FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+W L C + A V ++M ++ + L + Y + EKA K+ R
Sbjct: 574 TTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKA-KVKR 632
Query: 207 WMRESG 212
M+E G
Sbjct: 633 LMKERG 638
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 211/682 (30%), Positives = 346/682 (50%), Gaps = 94/682 (13%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++ L A LFD+MP +S+ T+ GYS+ +F ++L + + + ++N F+T
Sbjct: 82 QSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTT 141
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L + ++ +H V K G+ FVG+ L+ Y+ ++ A+ VFD+
Sbjct: 142 LLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDD----- 196
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC--EKALKLFRW 207
+ C KD+V WT +++ YA++ C E++L+LF
Sbjct: 197 -----------ICC---------------KDMVSWTGMVACYAEN---CFYEESLQLFNQ 227
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
MR G PN +T +++C L AF GK VHG +K ++ D +G AL+E Y
Sbjct: 228 MRIMGYK-PNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSG 286
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE--------------- 312
A R+++ + L + +I R ++A +F R+ +
Sbjct: 287 EIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQ 346
Query: 313 --ANSISY----------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
A+S+S N+++ YA G++++S +LFE++P
Sbjct: 347 ACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP------ 400
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
+RN VTWN++I GYVQ E+A+ L+ M + + T T+S + A
Sbjct: 401 -----------DRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRAS 449
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ L +L+ G +H+ +KT + + V SL+DMY++CG INDA+ +F ++ + +W
Sbjct: 450 ASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWN 509
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KS 527
A++ GYS HG+ EA+ LF++M D PN TFVGVLSAC AGL+ +G F SM K
Sbjct: 510 AMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKD 569
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
Y + P +EHYTC+V LLGR G EA + I ++ + +VW ALL AC +++G
Sbjct: 570 YDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRV 629
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVH 647
AQ + ++ + +V+LSN+YA G+W +RK + +V+K+PG SW+E VH
Sbjct: 630 CAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVH 689
Query: 648 AFSVEDRNNPNCNVIYATLEHL 669
FSV D ++P+ +I A LE L
Sbjct: 690 YFSVGDTSHPDIKLICAMLEWL 711
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 125/516 (24%), Positives = 214/516 (41%), Gaps = 98/516 (18%)
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
I GK +HC +LK G F + LL FY
Sbjct: 52 IAGKHLHCHILKRGTSLDLFAQNILLNFY------------------------------- 80
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
VQ N + DA +F +MP+ + + + L GY++ + + R +E E N +
Sbjct: 81 VQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHE--VNPFV 138
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL- 279
F ++++ + +H + K G D +G ALI+ Y D A V+D +
Sbjct: 139 FTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDIC 198
Query: 280 ---------------ENPCLNASNSLINGLISMGRIEDAELIFNRLT-----EANSIS-- 317
EN S L N + MG + I L EA ++
Sbjct: 199 CKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKS 258
Query: 318 -YNSMIKG---------------YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
+ +KG YA G++ D++RLFE+MP +I
Sbjct: 259 VHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIP------------- 305
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
W+ MI+ Y Q++ ++AL L++ MR+ ++ TF+ + AC+ SL G+ +H
Sbjct: 306 ----WSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIH 361
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
+ ++K SNV+V +++D+Y++CG I ++ F + N W ++ GY G G
Sbjct: 362 SCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGE 421
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI----FRSMKSYGVVPTLEHY 537
A+ LF MLE D+ P T+ VL A + G++I ++M + V
Sbjct: 422 RAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVA---- 477
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
++D+ + G +++A M + D V W A++
Sbjct: 478 NSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMI 512
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 123/273 (45%), Gaps = 26/273 (9%)
Query: 306 IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
I R T + + N ++ Y + D+ +LF++MP + N ++
Sbjct: 61 ILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMP-----------------QTNTIS 103
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
+ ++ GY +++ +AL + + K + F+ L + LHA +
Sbjct: 104 FVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVY 163
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K ++ +VGT+L+D YS G+++ A+ F I ++ +WT ++ Y+ + E++
Sbjct: 164 KLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQ 223
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----V 541
LF M PN T G L +C+ GL E + +S+ + +H V +
Sbjct: 224 LFNQMRIMGYKPNNFTISGALKSCL--GL--EAFNVGKSVHGCALKGCYDHDLFVGIALL 279
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+L +SG + +A+ ++MP + D + W +++
Sbjct: 280 ELYAKSGEIIDAQRLFEEMP-KTDLIPWSLMIA 311
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 8/161 (4%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+++++ +T+ ++T++ N I + G++ AR FD+M R VSWN M+CGYS
Sbjct: 459 LQIHSLTIKTMYNKDTVV--ANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYS 516
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYE---C 117
E+L+L M ++ K N+ TF +LS C+ L G Q H + Y+ C
Sbjct: 517 MHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG-QAHFESMSKDYDIKPC 575
Query: 118 FEFVGSGLLFFYANCFEIEEAKRVFDEL-HEDNELLWSLML 157
E + +++ +EA ++ E+ ++ + ++W +L
Sbjct: 576 IEHY-TCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALL 615
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 199/656 (30%), Positives = 331/656 (50%), Gaps = 73/656 (11%)
Query: 25 ITECGR------NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
+ EC R +G+L A +LFD+MP + VV+W +++ G ++ + + +L++ + M S
Sbjct: 49 VLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVES 108
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
V N+ + L CA L +L G+Q+H L +++G+ ++GS L+ Y+ C + A
Sbjct: 109 GVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAA 168
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
K VFD +M DVV +T LIS + ++ +
Sbjct: 169 KEVFD-------------------------------RMDSPDVVGYTSLISAFCRNGEFE 197
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI--G 256
A L + +++ + PNE+T +++ AC R+ G+ +HG LIK +S+
Sbjct: 198 LAAEALIQMLKQGLK--PNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSS 251
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
ALI+FY E D + C G I +GR I + L +
Sbjct: 252 TALIDFYSRNEGVDPNEFALSIVLGAC---------GSIGLGRQLHCSAIKHDLITDIRV 302
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S N+++ Y G V++ + + K+ + ++S W + IS QN
Sbjct: 303 S-NALLSMYGRTGLVEELEAMLNKIENPDLVS-----------------WTTAISANFQN 344
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
EKA+ L M FS + +C+ + SL QG H +K +S + G
Sbjct: 345 GFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTG 404
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+L++MYS+CG + A+ +F + + +V +W +L++G++ HG ++A+ +F M I
Sbjct: 405 NALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIK 464
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P+ +TF+GVL C +G+V EG FR M Y P HY C++D+LGR+G EA
Sbjct: 465 PDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALR 524
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
I DMP E DA++W LL++C N+++G+ AA ++ L + ++YV++SNIYA+ G+
Sbjct: 525 MINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGE 584
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
W +R+R+ VKKD GCSWIE+N+ VH F+ D ++PN + IY L L A
Sbjct: 585 WEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVA 640
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 149/334 (44%), Gaps = 44/334 (13%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
T I +N ++ GR G + + +++ +VSW T + + +++++L+ M
Sbjct: 298 TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQM 357
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
H N FS++LS CA + SL G Q HCL LK G + G+ L+ Y+ C ++
Sbjct: 358 HSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 417
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A+ FD +H + W+ ++ G+ Q DA
Sbjct: 418 GSARLAFDVMHTHDVTSWNSLIHGHAQ---HGDA-------------------------- 448
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI-KCGFEFDES 254
KAL++F MR +G P++ TF V+ C G EG++ L+I + F S
Sbjct: 449 ---NKALEVFSKMRSNGIK-PDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPS 504
Query: 255 IGGALIEFYCGCEAFDGAMRVY-------DRLENPCLNASNSLINGLISMGRIEDAELIF 307
+I+ FD A+R+ D L L AS L L +G++ L+
Sbjct: 505 HYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNL-DIGKLAADRLM- 562
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
L++ +S SY M YA++G+ +D++++ +M
Sbjct: 563 -ELSDRDSASYVLMSNIYAMHGEWEDARKVRRRM 595
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
++ I + N I + GQ+ +AR FD M V SWN+++ G+++ +++L + S
Sbjct: 398 DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSK 457
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL--------KSGYEC-FEFVGSGL 125
M + +K +++TF +L C + +G+ L++ S Y C + +G
Sbjct: 458 MRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNG 517
Query: 126 LFFYANCFEIEEAKRVFDELH-EDNELLWSLMLVGYVQCNLMSD------AFDVFIKMPK 178
F +EA R+ +++ E + L+W +L C L + A D +++
Sbjct: 518 RF--------DEALRMINDMPFEPDALIWKTLL---ASCKLHRNLDIGKLAADRLMELSD 566
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
+D + + + YA + E A K+ R M E+G
Sbjct: 567 RDSASYVLMSNIYAMHGEW-EDARKVRRRMDETG 599
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/654 (30%), Positives = 333/654 (50%), Gaps = 61/654 (9%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
NK + R G A +FD++ W +++ GY + ++DE+ SL M R +
Sbjct: 39 NKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPIS 98
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T S++L A+L G+ ++ VLK G+ V + +L + C +++ A++
Sbjct: 99 VLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQA 158
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FDE+ E + + W++M+ GY + + A F +MP+++VV WT +I GY
Sbjct: 159 FDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYV--------- 209
Query: 202 LKLFRWMRESGENMPNEYTFDSV-IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
++G+ + FDS+ ++ A G + G + F
Sbjct: 210 --------KAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIF--------- 252
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNS 320
G M ++D + N +I+G G +E A+ F+R+ N IS+
Sbjct: 253 ----------GKMPIHDT------GSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGI 296
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
M+ GY G + ++ LF++MP + N VTW++MI GY +N
Sbjct: 297 MLDGYIKNGDTNGARCLFDQMPMK-----------------NLVTWSTMIGGYARNGQPL 339
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
KAL+L+ ++ I + + ACS LG + + + + V S++ V TSL+
Sbjct: 340 KALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLI 399
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
DMY++CGSI A F ++ ++ ++ ++HGLG +A+ LF+ M +I P++
Sbjct: 400 DMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSV 459
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
TF+GVL+AC GLV+EG K F+ M + +G+ P+ +HY CVVDLLGR G L EA I++
Sbjct: 460 TFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRN 519
Query: 560 MPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKK 619
MPI +VVWGALL+AC N+++ E AA ++F ++ Y++LSNIYA G+WG
Sbjct: 520 MPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSV 579
Query: 620 MDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+R ++ V+K+ G SWIEL+ VH F + D ++ + + I L L ++
Sbjct: 580 AKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLILYLLCEDM 633
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 164/331 (49%), Gaps = 14/331 (4%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E IVS N I+ G N ++ AR FD+MP R VVSW +M+CGY K E+ L +
Sbjct: 164 EKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDS 223
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++ +++ ++S + ++ + I + + + SG + E
Sbjct: 224 MPVKDL----ASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIMISG----FCKAGE 275
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+E AK FD + N + W +ML GY++ + A +F +MP K++V W+ +I GYA++
Sbjct: 276 LESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARN 335
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
KAL+LF +E + P+E +I AC++LG + + + D
Sbjct: 336 GQPL-KALELFERFKEQ-DIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLR 393
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+ +LI+ Y C + + A+++++ L +++I L + G DA +F+++ AN
Sbjct: 394 VFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRAN 453
Query: 315 ----SISYNSMIKGYAVYGQVDDSKRLFEKM 341
S+++ ++ G VD+ ++ F++M
Sbjct: 454 IKPDSVTFLGVLTACNHGGLVDEGRKYFKQM 484
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 176/430 (40%), Gaps = 83/430 (19%)
Query: 224 VIRACARLGAFCEGKVVHG-LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
+I C L + K +H LLI+ E + L+ Y A D A +V+D + P
Sbjct: 8 IIHNCKTLKSL---KSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQP 64
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIK----------GYAVY 328
SLI+G + + ++A +F ++ + + +S++K G AVY
Sbjct: 65 NAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVY 124
Query: 329 G-------------------------QVDDSKRLFEKMPHRSIISLNTMIS--------- 354
G +VD +++ F++M + I+S N MIS
Sbjct: 125 GFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVD 184
Query: 355 ----VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
M ERN V+W SMI GYV+ +A L+ +M + S
Sbjct: 185 IARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGD 244
Query: 410 CL----------------------GSLQQGQLLHAH--LVKTPFESNVYVGTSLVDMYSR 445
C+ G + G+L A + P NV ++D Y +
Sbjct: 245 CVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMP-NKNVISWGIMLDGYIK 303
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
G N A+ F + N+ W+ ++ GY+ +G +A+ LFE EQDI P+ +G+
Sbjct: 304 NGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGI 363
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
+SAC + G+++ I + ++ L +T ++D+ + G + +A + +M D
Sbjct: 364 ISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMF-EMAHPKD 422
Query: 566 AVVWGALLSA 575
+ + +++A
Sbjct: 423 LLCYSTMIAA 432
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 205/684 (29%), Positives = 333/684 (48%), Gaps = 91/684 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G LV R +FD++ V WN ++ Y+K F ES+SL M + V N TF+ +L
Sbjct: 143 GDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVL 202
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
A L + + K++H VLK G+ V + L+ Y +E A +FDEL E + +
Sbjct: 203 KCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVV 262
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ G V + ++FI+M LI G +
Sbjct: 263 SWNSMINGCVVNGFSGNGLEIFIQM----------LILGVEVDLT--------------- 297
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
T SV+ ACA +G G+ +HG +K F + L++ Y C +G
Sbjct: 298 --------TLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNG 349
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE------------------- 312
A V+ ++ + + + S+I + G DA +F+ +
Sbjct: 350 ATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACAC 409
Query: 313 --------------------ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
+N N++I YA G V++++ +F K+P + I+S
Sbjct: 410 SSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVS---- 465
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
WN+MI GY QN L +AL+L++ M+K T + + AC+ L
Sbjct: 466 -------------WNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLA 511
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+L +G+ +H H+++ + S+++V +LVDMY++CG + AQ F I ++ +WT ++
Sbjct: 512 ALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIA 571
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY-GVV 531
GY HG G+EA+ F M I P+ ++F +L+AC +GL+NEG K F SM++ GV
Sbjct: 572 GYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVE 631
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P LEHY CVVDLL R G+L +A +FI+ MPI+ D +WG LLS C ++++ E+ A+
Sbjct: 632 PKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEH 691
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+F L+ YV+L+N+YA KW + +RKR+ K++PGCSWIE+ + + F
Sbjct: 692 IFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVA 751
Query: 652 EDRNNPNCNVIYATLEHLTANLNS 675
+ +P I L LT + +
Sbjct: 752 GNSKHPQAKKIDVLLSKLTMQMQN 775
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 248/519 (47%), Gaps = 61/519 (11%)
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+L ++ ++L +CA+ SL DGK++H +++ +G E +G+ L+F Y NC ++ + ++
Sbjct: 91 ELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRK 150
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+FD++ D LW+L++ Y + ++ +F KM K VV
Sbjct: 151 IFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVV------------------ 192
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
N YTF V++ A LG E K VHG ++K GF + ++ +LI
Sbjct: 193 ---------------GNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLI 237
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---------- 310
Y + A ++D L P + + NS+ING + G + IF ++
Sbjct: 238 AAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLT 297
Query: 311 ---------TEANSISYNSMIKGYAVYG----QVDDSKRLFEKMPHRSIISLNTMISVIP 357
++S + G+ V +V S L + + +LN V
Sbjct: 298 TLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDM--YSKCGNLNGATEVFV 355
Query: 358 EM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
+M + V+W S+I+ YV+ L+ A+ L+ M+ + T + + HAC+C SL +
Sbjct: 356 KMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDK 415
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +H++++K SN+ V +L++MY++CGS+ +A+ FS I ++ +W ++ GYS
Sbjct: 416 GRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQ 475
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
+ L +EA+ LF + +++ P+ T VL AC +++G +I + G L
Sbjct: 476 NLLPNEALELF-LDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHV 534
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+VD+ + G L A + + DM + D + W +++
Sbjct: 535 ACALVDMYAKCGLLVLA-QLLFDMIPKKDLISWTVMIAG 572
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 174/402 (43%), Gaps = 71/402 (17%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
TN I + G + AR +F ++P++ +VSWNTM+ GYS+ +E+L L M +
Sbjct: 435 TNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QF 493
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
K ++ T + +L CA L +L G++IH +L+ GY V L+ YA C + A+
Sbjct: 494 KPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQL 553
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+FD + + + + W++M+ GY + G+ +
Sbjct: 554 LFDMIPKKDLISWTVMIAGYG--------------------------MHGFG------NE 581
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIGGAL 259
A+ F MR +G P+E +F +++ AC+ G EG K + + +CG E +
Sbjct: 582 AISTFNEMRIAGIE-PDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACV 640
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED--------AELIFNRLT 311
++ + Y +E+ + ++ L+S RI AE IF L
Sbjct: 641 VDLL---ARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIF-ELE 696
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP-VTW---- 366
N+ Y + YA + ++ K+L ++M R ++NP +W
Sbjct: 697 PDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGF-------------KQNPGCSWIEVG 743
Query: 367 ---NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
N ++G N+ H +A ++ + + KL + +S +F
Sbjct: 744 GKFNIFVAG---NSKHPQAKKIDVLLSKLTMQMQNEDYSSMF 782
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 109/253 (43%), Gaps = 8/253 (3%)
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER--NPVTWN--SMISGYVQNNLHEKAL 383
Y + ++ +F K P R+ + L++ + V P + VT N + I+ + + A+
Sbjct: 23 YAKKSHNRFIFFKQPRRTCL-LHSTVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAI 81
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+L + + +++ + C+ SL+ G+ +H+ ++ + +G LV MY
Sbjct: 82 ELLTKSKSYELGL--NSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMY 139
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
CG + + F I + V W LM+ Y+ G E+V LF+ M + +V N TF
Sbjct: 140 VNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFT 199
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
VL G V E ++ + G ++ + G + A ++ E
Sbjct: 200 CVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-E 258
Query: 564 LDAVVWGALLSAC 576
D V W ++++ C
Sbjct: 259 PDVVSWNSMINGC 271
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/664 (29%), Positives = 353/664 (53%), Gaps = 56/664 (8%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L +AR LFD+MP R +VS+ T++ +++ F+ + +L + ++N+ +
Sbjct: 107 GKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLT 166
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
T+L + +++ +H K G++ FVGSGL+ Y+ C + +A+ VF+ +
Sbjct: 167 TMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRK 226
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ ++W+ M+ Y + + +AF VF KM V GC+
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRVFSKM-----------------RVSGCK--------- 260
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
PN + SV++A L + GK +HG IK + + +GGAL++ Y C
Sbjct: 261 -------PNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGD 313
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKG 324
A ++ + + + +I+ + E A +F RL + N S +S+++
Sbjct: 314 IKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQA 373
Query: 325 YAVYGQVDDSKRLFE---KMPHRSII--------------SLNTMISVIPEM-ERNPVTW 366
Q+D K++ K+ H S + +++ + + + + N V+W
Sbjct: 374 CTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSW 433
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N+++ G+ Q+ L E+AL ++ M+ + T+ T+S + AC+ S++ +H + K
Sbjct: 434 NTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK 493
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ F ++ +G SL+D Y++CG I DA F + ++ +W A+++GY+ HG ++A+ L
Sbjct: 494 STFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALEL 553
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLG 545
F+ M + ++ N TFV +LS C GLVN G+ +F SM+ +G+ P++EHYTC+V LLG
Sbjct: 554 FDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLG 613
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G L++A +FI D+P A+VW ALLS+C N+ +G +A+K+ ++ + + YV+
Sbjct: 614 RAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVL 673
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
LSN+YA G + +RK + ++ V+K PG SW+E+ +HAFSV ++P+ VI A
Sbjct: 674 LSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAM 733
Query: 666 LEHL 669
LE L
Sbjct: 734 LEWL 737
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/514 (21%), Positives = 213/514 (41%), Gaps = 92/514 (17%)
Query: 103 GKQIHCLVLKSGY--ECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
G+ +H V++ G F + LL Y + A+R+FD
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFD----------------- 120
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
+MP++++V + L+ +A+ D E A LFR +R G + N++
Sbjct: 121 --------------RMPERNMVSFVTLVQAHAQRGD-FEAAAALFRRLRWEGHEV-NQFV 164
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC-------EAFDG-- 271
++++ + A VH K G + + +G LI+ Y C F+G
Sbjct: 165 LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIV 224
Query: 272 ----------------------AMRVYDRLE----NPCLNASNSLINGLISMGRIEDAEL 305
A RV+ ++ P A S++ + + + +
Sbjct: 225 RKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKG 284
Query: 306 I----FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
I L + +++ YA G + D++ FE +P+ +I L+
Sbjct: 285 IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSF---------- 334
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
MIS Y Q+N +E+A +L++ + + ++ + S + AC+ + L G+ +H
Sbjct: 335 -------MISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIH 387
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
H +K ES+++VG +L+D Y++C ++ + FSS+ N +W ++ G+S GLG
Sbjct: 388 NHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGE 447
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
EA+ +F M + T+ VL AC + +I S++ ++
Sbjct: 448 EALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLI 507
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
D + G++ +A + + + +E D + W A++S
Sbjct: 508 DTYAKCGYIRDALKVFQHL-MERDIISWNAIISG 540
>gi|356546772|ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Glycine max]
Length = 713
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 209/678 (30%), Positives = 348/678 (51%), Gaps = 47/678 (6%)
Query: 17 LIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
++ N I E GRNG + A ++F +MPI+ SW ML +++ + + L M
Sbjct: 40 FLIQCNTQIAENGRNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMP 99
Query: 77 RSNVKLNETTFST-------------ILSVCAQLN---------SLIDGKQIHC---LVL 111
+ N S + SV A+ N + + H L
Sbjct: 100 QRTTVSNNAMISAYIRNGCNVGKAYELFSVLAERNLVSYAAMIMGFVKAGKFHMAEKLYR 159
Query: 112 KSGYECFEFVGS-GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAF 170
++ YE + S L+ Y E+ EA R+F+ + E + + WS M+ G + ++ A
Sbjct: 160 ETPYEFRDPACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAAR 219
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACAR 230
D+F +MP ++VV W+ +I GY ++ LF M+ G N T + +AC
Sbjct: 220 DLFDRMPDRNVVSWSAMIDGYMGE-GFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGN 278
Query: 231 LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSL 290
G EG +HGL+ + GFEFD + ++I Y D A +V+ + + + NSL
Sbjct: 279 CGRMSEGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSL 338
Query: 291 INGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
I+G I +E A +F R+ + IS+ +MI G++ G+V+++ LF +P
Sbjct: 339 ISGYIHNNEVEAAYRVFGRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLP-------- 390
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
++ W ++ISG+V NN +E+AL Y M T S + A +
Sbjct: 391 ---------AKDDFVWTAIISGFVNNNEYEEALHWYARMIWEGCKPNPLTISSVLAASAA 441
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L +L +G +H ++K E N+ + SL+ YS+ G++ DA F + PNV ++ ++
Sbjct: 442 LVALNEGLQIHTCILKMNLEYNLSIQNSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSI 501
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YG 529
++G++ +G G EA+ +++ M + PN TF+ VLSAC AGLV+EG IF +MKS YG
Sbjct: 502 ISGFAQNGFGDEALGIYKKMQSEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYG 561
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ P +HY C+VD+LGR+G L EA + I+ MP + + VWGA+L A + +++ + AA
Sbjct: 562 IEPEADHYACMVDILGRAGLLDEAIDLIRSMPFKPHSGVWGAILGASKTHLRLDLAKLAA 621
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE-VKKDPGCSWIELNSRVHA 648
Q++ L+ K + YV+LSN+Y+ GK D+ K +L+ +KK PGCSWI + ++VH
Sbjct: 622 QRITDLEPKNATPYVVLSNMYSAAGK-KIDGDLVKMAKNLKGIKKSPGCSWITMKNKVHL 680
Query: 649 FSVEDRNNPNCNVIYATL 666
F D+++ + I T+
Sbjct: 681 FLAGDQSHGSIEEIKTTI 698
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 326/644 (50%), Gaps = 82/644 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD MP WN M+ GYS+ + ++S+ M V +E T+ +L
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ ++ G+++H ++K G+ FV + L+ Y+ E+ A+ VFD
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFD-------- 178
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+ K DVV W +ISGY +S ++++KLF M E
Sbjct: 179 -----------------------RSSKGDVVTWNVMISGYNRS-KQFDESMKLFDEM-ER 213
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+P+ T SV+ AC++L GK VH + E + ALI+ Y C D
Sbjct: 214 MRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDT 273
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A+ IF+ + + IS+ +++ G+ GQV
Sbjct: 274 ALG-------------------------------IFDNMKSRDVISWTAIVTGFTNLGQV 302
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
++ F+KMP ER+ V+W +MI GY+Q N ++ L L+ M+
Sbjct: 303 GLARNYFDKMP-----------------ERDFVSWTAMIDGYLQVNRFKEVLSLFREMQA 345
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
I T + AC+ LG+L+ G+ + A++ K + + +VG +L+DMY CG++
Sbjct: 346 ANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEK 405
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A F+++ + +WTA++ G + +G G EA+ +F ML+ I P+ T +GVL AC
Sbjct: 406 AIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTH 465
Query: 512 AGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
+G+V++G K F M + +G+ P + HY C+VDLLGR+GHL EA E IK+MP++ +++VWG
Sbjct: 466 SGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWG 525
Query: 571 ALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630
+LL AC + E+ E AAQ++ L+ + + YV+L NIYA +W K ++RK +
Sbjct: 526 SLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRG 585
Query: 631 VKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+KK PGCS IE+N VH F D+ +P IY+ L+ ++ +L
Sbjct: 586 IKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLK 629
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 172/324 (53%), Gaps = 6/324 (1%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
+G++ AR +FD+ VV+WN M+ GY++ +FDES+ L M R V + T ++
Sbjct: 167 SGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSV 226
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
LS C++L L GK++H V E + + L+ YA C +++ A +FD + +
Sbjct: 227 LSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDV 286
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W+ ++ G+ + A + F KMP++D V WT +I GY + V+ ++ L LFR M +
Sbjct: 287 ISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQ-VNRFKEVLSLFREM-Q 344
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+ P+E+T S++ ACA LGA G+ + + K + D +G ALI+ Y C +
Sbjct: 345 AANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVE 404
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYA 326
A+R+++ + + + ++I GL G E+A +F+++ +A + ++ ++
Sbjct: 405 KAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACT 464
Query: 327 VYGQVDDSKRLFEKMPHRSIISLN 350
G VD K+ F +M + I N
Sbjct: 465 HSGMVDKGKKFFARMTTQHGIEPN 488
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 90/164 (54%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S +T GQ+ ARN FD+MP R VSW M+ GY + +F E LSL M
Sbjct: 286 VISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQA 345
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+N+K +E T +IL+ CA L +L G+ I + K+ + FVG+ L+ Y NC +E+
Sbjct: 346 ANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEK 405
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
A R+F+ + +++ W+ ++ G +A D+F +M K +
Sbjct: 406 AIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASI 449
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 6/174 (3%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR--CGSINDAQASFSSISS 461
L C + L+Q +H+ + T SN V ++ + G + A+ F ++
Sbjct: 25 LIKTCKSMAQLKQ---IHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPG 81
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
PN W ++ GYS G + AV ++ MLE+ ++P+ T+ +L R V G ++
Sbjct: 82 PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGREL 141
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G + ++ L SG + A + D + D V W ++S
Sbjct: 142 HDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARG-VFDRSSKGDVVTWNVMISG 194
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 214/692 (30%), Positives = 343/692 (49%), Gaps = 100/692 (14%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G V+AR LFD+MP R V+W ++ GY++ +++ ++ M N F +
Sbjct: 47 RIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGS 106
Query: 90 ILSVCAQLNSLI---DGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEAKRVFDEL 145
+ C + S++ G+Q+H +++G + VG+GL+ YA C +I+ A+ VF
Sbjct: 107 AIRACQE--SMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVF--- 161
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKL 204
LM D KD V W +I+G + + C E A+K
Sbjct: 162 ------------------GLMVD----------KDSVSWNSMITGLDQ--NKCFEDAVKS 191
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
+ MR++G MP+ + S + +CA LG G+ HG IK G + D S+ L+ Y
Sbjct: 192 YNSMRKTGL-MPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYA 250
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMG-RIEDAELIF----------NRLTEA 313
+V+ + + N++I L G + +A +F NR+T
Sbjct: 251 ETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFI 310
Query: 314 NSISY-----------------------------NSMIKGYAVYGQVDDSKRLFEKMPHR 344
N ++ N+++ Y G++++ + +F +M R
Sbjct: 311 NLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSER 370
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
R+ V+WNSMISGY+ N L KA+ L M + TF+ +
Sbjct: 371 ----------------RDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATV 414
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
AC+ + +L+ G +HA ++ ES+V +G++LVDMYS+CG I+ A F+ + N+
Sbjct: 415 LSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNL 474
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
+W ++++GY+ HG G A+ LF M +P+ TFVGVLSAC GLV+EG + F+S
Sbjct: 475 YSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKS 534
Query: 525 MKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF--WMN 581
M YG+VP +EHY+C+VDLLGR+G L + E FI MPI+ + ++W +L AC
Sbjct: 535 MTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRK 594
Query: 582 MEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
E+G RAA+ +F +D + YV+LSN+YA GKW R+ + VKK+ GCSW+
Sbjct: 595 TELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVT 654
Query: 642 LNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ VH F D ++P +IYA L+ L +
Sbjct: 655 MKDGVHVFVAGDNSHPEKGLIYAKLKELDKKI 686
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 215/505 (42%), Gaps = 70/505 (13%)
Query: 102 DGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYV 161
D H VLK G++ F+ + L+ Y + A+++FDE+ + N + W+ ++ GY
Sbjct: 18 DANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYT 77
Query: 162 QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTF 221
Q + DA V +M + G+ +PN + F
Sbjct: 78 QNGMPEDACGVLKEM----------IFEGF-----------------------LPNRFAF 104
Query: 222 DSVIRACARLGAF-CEGKVVHGLLIKCGF-EFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
S IRAC + +G+ VHG I+ G + ++G LI Y C D A V+ +
Sbjct: 105 GSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLM 164
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYN----SMIKGYAVYGQVDDSK 335
+ + NS+I GL EDA +N + + + N S + A G +
Sbjct: 165 VDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCI---- 220
Query: 336 RLFEKMPHRSIISL---------NTMISVIPE--------------MERNPVTWNSMISG 372
L + H I L NT++++ E +ER+ V+WN++I
Sbjct: 221 -LLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGA 279
Query: 373 YVQNNLH-EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
+ +A+++++ M + R TF L S L + + +HA ++K +
Sbjct: 280 LADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKD 339
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISS-PNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+ + +L+ Y + G + + + FS +S + +W ++++GY H+ L +A+ L +M
Sbjct: 340 DNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLM 399
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
+++ + TF VLSAC + GM++ + + + +VD+ + G +
Sbjct: 400 MQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRI 459
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
A F MP+ + W +++S
Sbjct: 460 DYASRFFNLMPVR-NLYSWNSMISG 483
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 155/347 (44%), Gaps = 72/347 (20%)
Query: 24 AITEC-GRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
A+ C G++G++ +F +M R VSWN+M+ GY +++ LV M + +
Sbjct: 346 ALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQR 405
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
L+ TF+T+LS CA + +L G ++H +++ E +GS L+ Y+ C I+ A R
Sbjct: 406 LDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRF 465
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F NLM P +++ W +ISGYA+ G + A
Sbjct: 466 F---------------------NLM----------PVRNLYSWNSMISGYARHGHG-DNA 493
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL-- 259
L+LF M+ SG+ +P+ TF V+ AC+ +G L+ GFE+ +S+
Sbjct: 494 LRLFTRMKLSGQ-LPDHITFVGVLSACSHIG-----------LVDEGFEYFKSMTEVYGL 541
Query: 260 ---IEFYCGCEAFDGAMRVYDRLEN-----PCLNASNSLI-----------NGL-ISMGR 299
+E Y G D++EN P N LI NG +GR
Sbjct: 542 VPRVEHYSCMVDLLGRAGELDKIENFINKMPI--KPNILIWRTVLGACCRGNGRKTELGR 599
Query: 300 IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
AE++FN + N+++Y + YA G+ +D R M ++
Sbjct: 600 -RAAEMLFN-MDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAV 644
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 165/395 (41%), Gaps = 76/395 (19%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I + G + AR++F M + VSWN+M+ G + F++++ ++M ++ +
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ + LS CA L ++ G+Q H +K G + V + LL YA + E ++V
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKV 261
Query: 142 FDELHEDNELLWSLMLVGYVQCNL-MSDAFDVFIKM------------------------ 176
F + E +++ W+ ++ +S+A +VF++M
Sbjct: 262 FSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLST 321
Query: 177 ---------------PKKDVVVWTKLISGYAKS--VDGCE-------------------- 199
K D + L++ Y KS ++ CE
Sbjct: 322 SKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 381
Query: 200 ---------KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
KA+ L M + G+ + + +TF +V+ ACA + G VH I+ E
Sbjct: 382 GYIHNELLCKAMDLVWLMMQRGQRL-DCFTFATVLSACATVATLECGMEVHACAIRACLE 440
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
D IG AL++ Y C D A R ++ + L + NS+I+G G ++A +F R+
Sbjct: 441 SDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRM 500
Query: 311 TEA----NSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ + I++ ++ + G VD+ F+ M
Sbjct: 501 KLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSM 535
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 204/668 (30%), Positives = 332/668 (49%), Gaps = 56/668 (8%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
NG + AR LFD+MP + V WN ML G+ K + + ++ + M K N TF+
Sbjct: 18 AENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFA 77
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++LS+CA G Q+H LV+ G+ V + L+ Y+ F +L
Sbjct: 78 SVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK----------FGQL--- 124
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
SDA +F MP +VV W +I+G+ ++ E +L LF M
Sbjct: 125 ------------------SDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASL-LFSEM 165
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+G + P+ TF S + + + +GK +HG +++ G D + ALI+ Y C
Sbjct: 166 ISAGVS-PDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRD 224
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKG 324
A +++ + N + ++I+G + G DA IF L E N+++ S++
Sbjct: 225 VGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPA 284
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTW 366
A ++ K L + + + S I +M E++ V W
Sbjct: 285 CAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCW 344
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N++I+ QN ++A+ L+ M + + + S AC+ L +L G+ +H+ ++K
Sbjct: 345 NAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIK 404
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
F+S V+ ++L+DMY +CG+++ A+ F + N +W +++ Y HG ++ L
Sbjct: 405 GAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLAL 464
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLG 545
F MLE I P+ TF+ +LSAC AG V++G++ FR M + YG+ +EHY C+VDL G
Sbjct: 465 FHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFG 524
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G L+EA E IK+MP D VWG LL AC N+E+ E A++ + LD + YV+
Sbjct: 525 RAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVL 584
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
LSN++A G+WG IR + V+K PG SWIE+N H F D ++P IY+
Sbjct: 585 LSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSV 644
Query: 666 LEHLTANL 673
L +L L
Sbjct: 645 LNNLLLEL 652
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/518 (25%), Positives = 237/518 (45%), Gaps = 58/518 (11%)
Query: 114 GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
G+ EFVGS L+ YA IE+A+R+FD
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFD------------------------------ 31
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
KMP KD V+W +++G+ K + A+K+F MR + PN TF SV+ CA
Sbjct: 32 -KMPNKDCVLWNVMLNGFVKCGEP-NSAVKVFEDMRNC-QTKPNSITFASVLSICASEAL 88
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
G +HGL+I CGF FD + AL+ Y A+++++ + + + N +I G
Sbjct: 89 SEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAG 148
Query: 294 LISMGRIEDAELIFNRLTEA----NSISYNSMI----------KGYAVYGQVDDSKRLFE 339
+ G +++A L+F+ + A +SI++ S + +G ++G + +
Sbjct: 149 FVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALD 208
Query: 340 KMPHRSIISLN------TMISVIPEMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRK 391
++I + M I + N V ++ISGYV N L+ AL+++ + +
Sbjct: 209 VFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLE 268
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+ T + + AC+ L +L G+ LHA+++K + +VG++++DMY++CG ++
Sbjct: 269 EKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDL 328
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A F + + W A++ S +G EA+ LF M + + + + LSAC
Sbjct: 329 AYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACAN 388
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
++ G I M + + ++D+ G+ G+L A + DM E + V W +
Sbjct: 389 LPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVA-RCVFDMMREKNEVSWNS 447
Query: 572 LLSACWFWMNMEVGERAAQKMF--GLDKKPISAYVILS 607
+++A ++EV KM G+ ++ ILS
Sbjct: 448 IIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILS 485
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 199/672 (29%), Positives = 355/672 (52%), Gaps = 61/672 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++G + A+ +FD + +V WN ML G+ + +E++ + M R++++ ++ TF +
Sbjct: 374 KHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVS 433
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C L+SL G+Q+HC+ +K+ + FV + +L Y+ I+ AK +F
Sbjct: 434 VLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALF------- 486
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
SL+ P KD V W LI G A + + E+A+ + + M+
Sbjct: 487 ----SLI--------------------PGKDSVSWNALIVGLAHNEEE-EEAVYMLKRMK 521
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G P+E +F + I AC+ + A GK +H IK + ++G +LI+ Y
Sbjct: 522 CYG-IAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDV 580
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKG- 324
+ + +V ++ + N+LI GL+ R ++A +F ++ + ++ ++ S++ G
Sbjct: 581 ESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGC 640
Query: 325 ----YAVYGQVDDSKRLFEKMPHRSI---ISL-------------NTMISVIPEMERNPV 364
+V G+ S L + ++ ISL N +++ +P+ +N V
Sbjct: 641 TGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPD-HKNLV 699
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
W + ISGY QN +++L ++ MR + +TF+ + ACS + +L G+ +H +
Sbjct: 700 EWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLI 759
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEA 483
+K+ F S ++L+DMYS+CG + + F + + N+ W +++ G++ +G +EA
Sbjct: 760 IKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEA 819
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVD 542
+LLF+ M E + P+ T +GVL AC AGL++EG +F SM YG+VP ++HY C++D
Sbjct: 820 LLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLID 879
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISA 602
LLGR GHL EA+E I +P D V+W L+AC + E G+ AA+K+ ++ + S
Sbjct: 880 LLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSST 939
Query: 603 YVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
YV LS+++A G W + R+ + V K PGCSWI + ++ + F V+D ++P+ I
Sbjct: 940 YVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKTNLFVVQDTHHPDTLGI 999
Query: 663 YATLEHLTANLN 674
Y L+ LT +N
Sbjct: 1000 YKMLDDLTGMMN 1011
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/590 (23%), Positives = 266/590 (45%), Gaps = 91/590 (15%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
I+ G+L AR L ++ + + V+WN ++ YS+ E L M R +
Sbjct: 268 ISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTR 327
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
+TF+++LS A + + +G+QIH +K G + FVGS L+ Y I +AK+VFD
Sbjct: 328 STFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDF 387
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
E N ++W+ ML G+VQ +L E+ +++
Sbjct: 388 STEKNIVMWNAMLYGFVQNDLQ--------------------------------EETIQM 415
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F++MR + + +++TF SV+ AC L + G+ VH + IK + D + A+++ Y
Sbjct: 416 FQYMRRA-DLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYS 474
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-------------- 310
A D A ++ + + N+LI GL E+A + R+
Sbjct: 475 KLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFAT 534
Query: 311 ----------TEAN------SISYN---------SMIKGYAVYGQVDDSKRLFEKMPHRS 345
TE SI YN S+I Y+ +G V+ S+++ + S
Sbjct: 535 AINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASS 594
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
++ + N++I+G VQNN ++A++L+ + K + TF+ +
Sbjct: 595 MVPI-----------------NALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASIL 637
Query: 406 HACSCLGSLQQGQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISS-PN 463
C+ S G+ +H++ +K+ + +G SLV +Y +C + DA + + N
Sbjct: 638 SGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKN 697
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+ WTA ++GY+ +G +++++F M D+ + ATF VL AC + +G +I
Sbjct: 698 LVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHG 757
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G V + ++D+ + G + + E K++ + + + W +++
Sbjct: 758 LIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMI 807
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/573 (24%), Positives = 253/573 (44%), Gaps = 104/573 (18%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
++ + +LS C++L +L G+Q+HC VLKSG+ F +GL+ YA C E+++A+RVF
Sbjct: 159 DQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVF 218
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK------------------------ 178
D + + + W+ M+ GY + A +F +M K
Sbjct: 219 DGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLS 278
Query: 179 -----------KDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSVIR 226
V W +IS Y++S G E + L++ M+ G MP TF S++
Sbjct: 279 DARTLLKRIQMPSTVAWNAVISSYSQS--GLESEVFGLYKDMKRQGL-MPTRSTFASMLS 335
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
A A + AF EG+ +H +K G + + +G +LI Y A +V+D +
Sbjct: 336 AAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVM 395
Query: 287 SNSLINGLISMGRIEDAELIFNRLT----EANSISY------------------------ 318
N+++ G + E+ +F + EA+ ++
Sbjct: 396 WNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITI 455
Query: 319 -----------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
N+M+ Y+ G +D +K LF S+IP ++ V+WN
Sbjct: 456 KNSMDADLFVANAMLDMYSKLGAIDVAKALF---------------SLIP--GKDSVSWN 498
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
++I G N E+A+ + M+ I +F+ +ACS + + + G+ +H +K
Sbjct: 499 ALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKY 558
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
SN VG+SL+D+YS+ G + ++ + + + ++ AL+ G + EA+ LF
Sbjct: 559 NVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELF 618
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL--EHYTCVVDLLG 545
+ +L+ P+ TF +LS C G V+ I + + SY + L + + + L+G
Sbjct: 619 QQVLKDGFKPSNFTFASILSGCT--GPVSS--VIGKQVHSYTLKSALLNQDTSLGISLVG 674
Query: 546 ---RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ L +A + + ++P + V W A +S
Sbjct: 675 IYLKCKLLEDANKLLAEVPDHKNLVEWTATISG 707
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 188/376 (50%), Gaps = 22/376 (5%)
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
L F+ +R S P+++ V+ AC+RLGA +G+ VH ++K GF L++
Sbjct: 144 LDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVD 203
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS----IS 317
Y C A RV+D + P S+I G +GR + A +F+R+ + S ++
Sbjct: 204 MYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVT 263
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
Y ++I A G++ D++ L +++ S V WN++IS Y Q+
Sbjct: 264 YVTIISTLASMGRLSDARTLLKRIQMPST-----------------VAWNAVISSYSQSG 306
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
L + LY M++ + TRSTF+ + A + + + +GQ +HA VK ++NV+VG+
Sbjct: 307 LESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGS 366
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SL+++Y + G I+DA+ F + N+ W A++ G+ + L E + +F+ M D+
Sbjct: 367 SLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEA 426
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
+ TFV VL AC+ ++ G ++ + L ++D+ + G + A+
Sbjct: 427 DDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALF 486
Query: 558 KDMPIELDAVVWGALL 573
+P + D+V W AL+
Sbjct: 487 SLIPGK-DSVSWNALI 501
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 203/665 (30%), Positives = 330/665 (49%), Gaps = 80/665 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N IT R G A +F MP R V++NT++ G+++ A + +L + M S +
Sbjct: 182 NALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLS 241
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T S++L+ CA L L G Q+H + K+G + LL Y C ++E A +
Sbjct: 242 PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F+ + N +LW+L+LV + Q N ++ +F+
Sbjct: 302 FNLGNRTNVVLWNLILVAFGQINDLAKSFE------------------------------ 331
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
LF M+ +G PN++T+ ++R C G G+ +H L +K GFE D + G LI+
Sbjct: 332 --LFCQMQTAGIR-PNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLID 388
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE--------- 312
Y + A RV + L+ + + S+I G + +DA F + +
Sbjct: 389 MYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIG 448
Query: 313 -ANSIS----YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-------- 359
A++IS +M +G ++ +V S + ++++L I E
Sbjct: 449 LASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIE 508
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
++ +TWN ++SG+ Q+ LHE+AL+++M M + + TF A + L ++QG+
Sbjct: 509 HKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ 568
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+HA ++KT VG +L+ +Y +CGS DA+ FS +S N +W ++ S HG
Sbjct: 569 IHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGR 628
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYT 538
G EA+ F+ M + EG+ F+SM YG+ P +HY
Sbjct: 629 GLEALDFFDQMKK------------------------EGLSYFKSMSDKYGIRPRPDHYA 664
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
CV+D+ GR+G L A++F+++MPI DA+VW LLSAC N+EVGE AA+ + L+
Sbjct: 665 CVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPH 724
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
++YV+LSN YAV GKW + +RK + V+K+PG SWIE+ + VHAF V DR +P
Sbjct: 725 DSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPL 784
Query: 659 CNVIY 663
IY
Sbjct: 785 AEQIY 789
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 143/574 (24%), Positives = 259/574 (45%), Gaps = 66/574 (11%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+NG ++ AR +F+++ R VSW ML GY++ +E+L L MHR+ V S+
Sbjct: 89 KNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSS 148
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C + G+ +H K G+ FVG+ L+ Y C A+RVF ++ +
Sbjct: 149 VLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRD 208
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ ++ ++ G+ QC E AL++F M+
Sbjct: 209 TVTFNTLISGHAQCA--------------------------------HGEHALEIFEEMQ 236
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
SG + P+ T S++ ACA LG +G +H L K G D + G+L++ Y C
Sbjct: 237 SSGLS-PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDV 295
Query: 270 DGAMRVYDRLENPCLNASNSLINGLI--SMGRIEDAELIFNRLTE-------ANSISYNS 320
+ A+ +++ N +N ++ LI + G+I D F + N +Y
Sbjct: 296 ETALVIFN-----LGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPC 350
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERN 362
+++ G++D +++ S + V+ +M E++
Sbjct: 351 ILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
V+W SMI+GYVQ+ + AL + M+K I + C+ + +++QG +HA
Sbjct: 411 VVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHA 470
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+ + + +V + +LV++Y+RCG I +A +SF I + W L++G++ GL E
Sbjct: 471 RVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
A+ +F M + + N TFV LSA + +G +I + G E ++
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALIS 590
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
L G+ G +A+ +M E + V W ++++C
Sbjct: 591 LYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSC 623
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 155/679 (22%), Positives = 276/679 (40%), Gaps = 84/679 (12%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
M R S L G+ + LSL + R + L F+ L C +G
Sbjct: 1 MTRRGAASLGWSLAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRG-----NG 55
Query: 104 K------QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
+ +IH + G VG+ L+ Y+ + A+RVF+EL + + W ML
Sbjct: 56 RRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAML 115
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
GY Q L E+AL L+R M +G +P
Sbjct: 116 SGYAQNGL--------------------------------GEEALWLYRQMHRAGV-VPT 142
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
Y SV+ +C + F +G+ VH K GF + +G ALI Y C +F A RV+
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFY 202
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDD 333
+ + N+LI+G E A IF + + + ++ +S++ A G +
Sbjct: 203 DMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQK 262
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNSMISGYVQ 375
+L + + S M + ++ N V WN ++ + Q
Sbjct: 263 GTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQ 322
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N K+ +L+ M+ I + T+ + C+C G + G+ +H+ VKT FES++YV
Sbjct: 323 INDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYV 382
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
L+DMYS+ G + A+ + +V +WT+++ GY H +A+ F+ M + I
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGI 442
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P+ +S C + +G++I + G + + +V+L R G + EA
Sbjct: 443 WPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFS 502
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI--SAYVILSNIYAVL 613
+++ + D + W L+S + + E A + +D+ + + + +S + A
Sbjct: 503 SFEEIEHK-DEITWNGLVSG---FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASA 558
Query: 614 G----KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF--------SVEDRNNPNCNV 661
K GK++ R T + + G + I L + +F + +RN + N
Sbjct: 559 NLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNT 618
Query: 662 IYATLEHLTANLNSVVLFD 680
I + L ++ FD
Sbjct: 619 IITSCSQHGRGLEALDFFD 637
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/590 (32%), Positives = 312/590 (52%), Gaps = 51/590 (8%)
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYAN--CFEIEEAKRVFDELHEDNELLWSLMLVGYV 161
+Q+H LK+ FV S LL Y++ ++ A+ +FD + + + W+ ++ YV
Sbjct: 30 EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 89
Query: 162 QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTF 221
+ D +V++ +L+ Y +P+ +T
Sbjct: 90 ENQFSHDG-----------IVLFHELVHEY-----------------------LPDNFTL 115
Query: 222 DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
VI+ CARLG EGK +HGL +K GF D + G+L+ Y C D A +V+D + +
Sbjct: 116 PCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMID 175
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ NSLI+G G I+ A +F + E ++ S+ ++ G + G+V+ +++LF++M
Sbjct: 176 KDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQM 235
Query: 342 PHRSIISLNTMI----------SVIPEMERNP----VTWNSMISGYVQNNLHEKALQLYM 387
P R+++S N MI S + + P VTWN MI+GY N A++++
Sbjct: 236 PCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFF 295
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
M KL + +T + A S L L +G+ +H+++ K FE + +GTSL++MY++CG
Sbjct: 296 MMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCG 355
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
I A F +I V WTA++ G HG+ + A+ LF M + + PNA F+GVL+
Sbjct: 356 CIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLN 415
Query: 508 ACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
AC AGLV++G + F M Y + PTLEHY C+VD+L R+GHL EA+ I++MPI +
Sbjct: 416 ACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNK 475
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
V+W +LL +++GE AAQ++ + + I Y++LSN+YA G W K +R+ +
Sbjct: 476 VIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMM 535
Query: 627 THLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+KDPGCS +E +H F V D ++P IYA + + L V
Sbjct: 536 YKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCV 585
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 221/491 (45%), Gaps = 46/491 (9%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+L+A +T + + S A+ + L AR++FD++ R+++ WNT++ Y +
Sbjct: 31 QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 90
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
+ + L + + N T ++ CA+L + +GKQIH L LK G+ FV
Sbjct: 91 NQFSHDGIVLFHELVHEYLPDN-FTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFV 149
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
L+ Y+ C EI+ A++VFD + + + +LW+ ++ GY +C + A +F +MP++D
Sbjct: 150 QGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDA 209
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMR----ESGENMPNEY----TFDSVIRACARLGA 233
WT L+ G +K E A KLF M S M N Y FDS + ++
Sbjct: 210 FSWTVLVDGLSK-CGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPI 268
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
+ +V L+ G+E + A+ F+ +++ R + L + S ++G
Sbjct: 269 W---DLVTWNLMIAGYELNGQFMDAVKMFFM-------MLKLGSRPSHATLVSVLSAVSG 318
Query: 294 LISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
L +G+ I + + E + I S+I+ YA G ++ + +F + + +
Sbjct: 319 LAVLGK---GRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKV--- 372
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
W ++I G + + AL L++ M K + F + +AC+
Sbjct: 373 --------------GHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACN 418
Query: 410 CLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAW 467
G + G Q + + E + LVD+ R G + +A+ + ++ SPN W
Sbjct: 419 HAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIW 478
Query: 468 TALMNGYSHHG 478
+L+ G +HG
Sbjct: 479 MSLLGGSRNHG 489
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND---AQASFSSISSPNVAAWTALM 471
Q+ + LHA +KT ++ +V + L+ +YS IND A++ F I ++ W ++
Sbjct: 27 QEVEQLHAFSLKTAIFNHPFVSSRLLALYSD-PKINDLGYARSIFDRIQRRSLIHWNTII 85
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
Y + + ++LF ++ + +P+ T V+ C R G+V EG +I G
Sbjct: 86 KCYVENQFSHDGIVLFHELV-HEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFG 144
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ +V++ + G + A + M I+ D V+W +L+
Sbjct: 145 SDVFVQGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDG 187
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 195/664 (29%), Positives = 353/664 (53%), Gaps = 56/664 (8%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L +AR LFD+MP R +VS+ T++ +++ F+ + +L + ++N+ +
Sbjct: 107 GKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLT 166
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
T+L + +++ +H K G++ FVGSGL+ Y+ C + +A+ VF+ +
Sbjct: 167 TMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRK 226
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ ++W+ M+ Y + + +AF VF KM V GC+
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRVFSKM-----------------RVSGCK--------- 260
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
PN + SV++A L + GK +HG IK + + +GGAL++ Y C
Sbjct: 261 -------PNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGD 313
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKG 324
A ++ + + + +I+ + E A +F RL + N S +S+++
Sbjct: 314 IKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQA 373
Query: 325 YAVYGQVDDSKRLFE---KMPHRSII--------------SLNTMISVIPEM-ERNPVTW 366
Q+D K++ K+ H S + +++ + + + + N V+W
Sbjct: 374 CTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSW 433
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N+++ G+ Q+ L E+AL ++ M+ + T+ T+S + AC+ S++ +H + K
Sbjct: 434 NTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK 493
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ F ++ +G SL+D Y++CG I DA F + ++ +W A+++GY+ HG ++A+ L
Sbjct: 494 STFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALEL 553
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLG 545
F+ M + ++ N TFV +LS C GLVN G+ +F SM+ +G+ P++EHYTC+V LLG
Sbjct: 554 FDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLG 613
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G L++A +FI D+P A+VW ALLS+C N+ +G +A+K+ ++ + + YV+
Sbjct: 614 RAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVL 673
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
LSN+YA G + +RK + ++ V+K PG SW+E+ +HAFSV ++P+ VI A
Sbjct: 674 LSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAM 733
Query: 666 LEHL 669
LE L
Sbjct: 734 LEWL 737
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/514 (21%), Positives = 213/514 (41%), Gaps = 92/514 (17%)
Query: 103 GKQIHCLVLKSGY--ECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
G+ +H V++ G F + LL Y + A+R+FD
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFD----------------- 120
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
+MP++++V + L+ +A+ D E A LFR +R G + N++
Sbjct: 121 --------------RMPERNMVSFVTLVQAHAQRGD-FEAAAALFRRLRWEGHEV-NQFV 164
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC-------EAFDG-- 271
++++ + A VH K G + + +G LI+ Y C F+G
Sbjct: 165 LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIV 224
Query: 272 ----------------------AMRVYDRLE----NPCLNASNSLINGLISMGRIEDAEL 305
A RV+ ++ P A S++ + + + +
Sbjct: 225 RKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKG 284
Query: 306 I----FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
I L + +++ YA G + D++ FE +P+ +I L+
Sbjct: 285 IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSF---------- 334
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
MIS Y Q+N +E+A +L++ + + ++ + S + AC+ + L G+ +H
Sbjct: 335 -------MISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIH 387
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
H +K ES+++VG +L+D Y++C ++ + FSS+ N +W ++ G+S GLG
Sbjct: 388 NHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGE 447
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
EA+ +F M + T+ VL AC + +I S++ ++
Sbjct: 448 EALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLI 507
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
D + G++ +A + + + +E D + W A++S
Sbjct: 508 DTYAKCGYIRDALKVFQHL-MERDIISWNAIISG 540
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 184/550 (33%), Positives = 292/550 (53%), Gaps = 59/550 (10%)
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
M A +F ++ + D + +I G+ E A+ LF+ M E+ P+E+TF ++
Sbjct: 74 MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHE-AILLFKEMHENSVQ-PDEFTFPCIL 131
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
+ C+RL A EG+ +H L++KCGF + LI Y C + A RV+D + +
Sbjct: 132 KVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVR 191
Query: 286 ASNSLING--------------------------------LISMGRIEDAEL--IFNRLT 311
NS+ G L + GR+ D EL NR
Sbjct: 192 TWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYV 251
Query: 312 EANSISYN-----SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
E + N S++ YA GQVD ++RLF++M R + V W
Sbjct: 252 EEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDV-----------------VAW 294
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
++MISGY Q + +AL L+ M+K ID T + +C+ LG+L+ G+ +H + K
Sbjct: 295 SAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKK 354
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ V +GT+L+D Y++CGS+ + F + NV +WT L+ G + +G G +A+
Sbjct: 355 KRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEY 414
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLG 545
F +MLE+++ PN TF+GVLSAC AGLV+EG +F SM + +G+ P +EHY C+VD+LG
Sbjct: 415 FYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILG 474
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G + EA +FIK+MPI+ +AV+W LL++C N+E+GE + +++ L+ Y++
Sbjct: 475 RAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYIL 534
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
LSNIYA +G+W + +R + +KK PGCS IEL+ +H F ED + IY
Sbjct: 535 LSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNA 594
Query: 666 LEHLTANLNS 675
+E + + S
Sbjct: 595 IEDMMKQIKS 604
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 133/524 (25%), Positives = 239/524 (45%), Gaps = 64/524 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A ++F Q+ ++N M+ G++ E++ L MH ++V+ +E TF IL VC++
Sbjct: 77 AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L +L +G+QIH L++K G+ FV + L+ YANC E+E A+RVFDE+ E N W+ M
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
GY + SG E+ +KLF M E
Sbjct: 197 FAGYTK--------------------------SG------NWEEVVKLFHEMLELDIRF- 223
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+E T SV+ AC RL G+ ++ + + G + + ++ +L++ Y C D A R++
Sbjct: 224 DEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLF 283
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVD 332
D+++ + A +++I+G R +A +F+ + +A N I+ S++ AV G ++
Sbjct: 284 DQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALE 343
Query: 333 DSK--RLFEKMPHRSII---------------SLNTMISVIPEME-RNPVTWNSMISGYV 374
K F K + S+ + I V +M +N ++W +I G
Sbjct: 344 TGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLA 403
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNV 433
N +KAL+ + M + ++ TF + ACS G + +G+ L + + E +
Sbjct: 404 SNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRI 463
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSEAVLLFEI 489
+VD+ R G I +A ++ PN W L+ H +G E++ I
Sbjct: 464 EHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQL-I 522
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT 533
+LE ++ ++ + + G + +K+ MK G+ T
Sbjct: 523 ILEPT---HSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKT 563
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 199/426 (46%), Gaps = 55/426 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ AR +FD+M R V +WN+M GY+K ++E + L M +++ +E T ++L
Sbjct: 173 GEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVL 232
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ C +L L G+ I+ V + G + + + L+ YA C +++ A+R+FD++ + +
Sbjct: 233 TACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVV 292
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS M+ GY Q + +A D+F +M K ++
Sbjct: 293 AWSAMISGYSQASRCREALDLFHEMQKANI------------------------------ 322
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
PNE T S++ +CA LGA GK VH + K + ++G AL++FY C + +
Sbjct: 323 ---DPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVES 379
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGR----IEDAELIFNRLTEANSISYNSMIKGYAV 327
++ V+ ++ + + LI GL S G+ +E L+ + E N +++ ++ +
Sbjct: 380 SIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSH 439
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G VD+ + LF +S++ + P +E + M+ + L E+A Q
Sbjct: 440 AGLVDEGRDLF--------VSMSRDFGIEPRIEH----YGCMVDILGRAGLIEEAFQF-- 485
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
++ + I + L +C +++ G + L ++ P S Y+ L ++Y+
Sbjct: 486 -IKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYI--LLSNIYASV 542
Query: 447 GSINDA 452
G DA
Sbjct: 543 GRWEDA 548
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 113/232 (48%), Gaps = 36/232 (15%)
Query: 7 QSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD 66
+ + L TLI S +CG Q+ TAR LFDQM R VV+W+ M+ GYS+ ++
Sbjct: 252 EEKGLKGNPTLITSLVDMYAKCG---QVDTARRLFDQMDRRDVVAWSAMISGYSQASRCR 308
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
E+L L M ++N+ NE T +ILS CA L +L GK +H + K + +G+ L+
Sbjct: 309 EALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALM 368
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
FYA C +E + VF ++ P K+V+ WT
Sbjct: 369 DFYAKCGSVESSIEVFGKM-------------------------------PVKNVLSWTV 397
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
LI G A + G +KAL+ F M E PN+ TF V+ AC+ G EG+
Sbjct: 398 LIQGLASNGQG-KKALEYFYLMLEKNVE-PNDVTFIGVLSACSHAGLVDEGR 447
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 6/231 (2%)
Query: 348 SLNTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
S++ +S+ ++ E + +N MI G+ +A+ L+ M + ++ TF +
Sbjct: 73 SMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILK 132
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
CS L +L +G+ +HA ++K F S+ +V +L+ MY+ CG + A+ F +S NV
Sbjct: 133 VCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRT 192
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
W ++ GY+ G E V LF MLE DI + T V VL+AC R + G I R ++
Sbjct: 193 WNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVE 252
Query: 527 SYGVV--PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G+ PTL T +VD+ + G + A M D V W A++S
Sbjct: 253 EKGLKGNPTL--ITSLVDMYAKCGQVDTARRLFDQMD-RRDVVAWSAMISG 300
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 190/637 (29%), Positives = 332/637 (52%), Gaps = 55/637 (8%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
++ L C + + K++HC ++++ F+ + L+ Y +++ A+ VFD +
Sbjct: 8 YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ N W+ +L Y + + D VF MP DVV W L+SGYA + ++++++
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGN-GLISESVRVYN 126
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M + G N TF +++ + G G+ +HG + K G++ +G L++ Y
Sbjct: 127 MMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKT 186
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM----- 321
+ A R+++ + + N++I GL+ I +AE +F+ + E +SIS+ ++
Sbjct: 187 GFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLT 246
Query: 322 ----------------IKGYAV----YGQV----------DDSKRLFE---KMPHRSIIS 348
I+G+ + +G V D+ K++ + ++ I
Sbjct: 247 QNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIF 306
Query: 349 LNTMI--------------SVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
+ + + +V +M +N ++W +M+ GY QN E+A++++ M++
Sbjct: 307 VGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNE 366
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
I T + +C+ L SL++G H + + V V +L+ +Y +CGS+ A
Sbjct: 367 IHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAH 426
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F + + +WTAL++GY+ G +E + LFE ML IVP+ TFVGVLSAC RAG
Sbjct: 427 QLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAG 486
Query: 514 LVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
LV +G F M K + + P +HYTC++DLL R+G L EA+ FI MP DA+ W L
Sbjct: 487 LVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATL 546
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
LS+C N+E+G+ AA+ + L+ + ++Y++LS+IYA GKW +RK + + VK
Sbjct: 547 LSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVK 606
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
K+PG SWI+ ++VH FS +DR++P + IYA LE L
Sbjct: 607 KEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESL 643
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 150/550 (27%), Positives = 267/550 (48%), Gaps = 40/550 (7%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N ++ + G L + +FD MP VVSWN++L GY+ ES+ + + M +
Sbjct: 71 LFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLK 130
Query: 78 S-NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+V LN TFST+L + + + G+QIH + K GY+ + FVGS L+ YA I
Sbjct: 131 DGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFIN 190
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+A R+F+E+ E N ++++ M+ G ++C + +A +F MP+KD + WT +I+G ++
Sbjct: 191 DANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQN-G 249
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
++A+ F+ M G M +++TF SV+ AC A EGK +H +I+ ++ + +G
Sbjct: 250 LFKEAVDKFKEMGIEGFCM-DQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVG 308
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF--------- 307
AL++ YC C A V+ ++ + + + +++ G G E+A IF
Sbjct: 309 SALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIH 368
Query: 308 -NRLTEANSIS----YNSMIKGYAVYGQVDDSKRLFEKMPHRSII-------SLNTMISV 355
+ T + IS S+ +G +GQ S + ++I SL +
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQL 428
Query: 356 IPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
EM+ R+ V+W +++SGY Q + + L+ TM I TF + ACS G +
Sbjct: 429 FHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLV 488
Query: 415 QQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTA 469
++G +VK TP + T ++D+ SR G + +A+ + + SP+ W
Sbjct: 489 EKGYHYFECMVKEHRITPIPDHY---TCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWAT 545
Query: 470 LMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
L++ +G +G A + Q N A+++ + S G ++ K+ + M+
Sbjct: 546 LLSSCRLNGNLEIGKWAAESLHKLEPQ----NPASYILLSSIYAAKGKWDDVAKLRKGMR 601
Query: 527 SYGVVPTLEH 536
GV H
Sbjct: 602 EMGVKKEPGH 611
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 53/309 (17%)
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
N YT + ++ C + K +H +I+ + + LI Y A V+
Sbjct: 6 NYYT--AALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVF 63
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
D + P L + N+L++ +G ++D + +F+ + + +S+NS++ GYA G + +S R
Sbjct: 64 DHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVR 123
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
++ M ++LN
Sbjct: 124 VYNMMLKDGSVNLN---------------------------------------------- 137
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
R TFS + S G + G+ +H + K ++S ++VG+ LVDMY++ G INDA F
Sbjct: 138 -RITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIF 196
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
I N+ + ++ G EA LF+ M E+D + ++ +++ + GL
Sbjct: 197 EEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSI----SWTTIITGLTQNGLFK 252
Query: 517 EGMKIFRSM 525
E + F+ M
Sbjct: 253 EAVDKFKEM 261
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 201/644 (31%), Positives = 320/644 (49%), Gaps = 86/644 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGY-SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
ARNLFDQ+P + +WNT++ Y S F + + + + N+ TF ++ +
Sbjct: 78 ARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAAS 137
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+L + G +H + +K + ++ + L+ FY C ++ A+R+F + + + W+
Sbjct: 138 ELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNS 197
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
M+ + Q N DA ++F+KM +++V M
Sbjct: 198 MISAFAQGNCPEDALELFLKMERENV---------------------------------M 224
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN T V+ ACA+ G+ V + + G + D ++ A+++ Y C
Sbjct: 225 PNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKC--------- 275
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
G ++DA+ +F+ + E + S+ M+ GYA G D ++
Sbjct: 276 ----------------------GSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAAR 313
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY--MTMRKLA 393
+F MP + I WN +IS Y QN ++AL ++ + + K+A
Sbjct: 314 LVFNAMPVKEI-----------------AAWNVLISAYEQNGKPKEALAIFNELQLSKIA 356
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+ S L AC+ LG++ G +H ++ + N ++ +SLVDMY++CGS+ A
Sbjct: 357 KPDEVTLVSTL-SACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKAL 415
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F S+ +V W+A++ G HG G A+ LF M E + PN+ TF VL AC AG
Sbjct: 416 EVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAG 475
Query: 514 LVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
LV+EG F M+ YGVVP ++HY C+VD+LGR+G L EA E I +M A VWGAL
Sbjct: 476 LVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGAL 535
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
L AC MN+E+GE A+ ++ L+ + A V+LSNIYA G+W K ++RK + E+K
Sbjct: 536 LGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELK 595
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
K+PGCS IE N VH F V D +P + IY+ LE + L SV
Sbjct: 596 KEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSV 639
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 199/402 (49%), Gaps = 20/402 (4%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G G L A LF + + VVSWN+M+ +++ +++L L M R NV N T
Sbjct: 172 GACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMV 231
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+LS CA+ L G+ + + + G + + + +L Y C +++A+++FDE+ E
Sbjct: 232 GVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPER 291
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ W++ML GY + A VF MP K++ W LIS Y ++ E AL +F +
Sbjct: 292 DVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKE-ALAIFNEL 350
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ S P+E T S + ACA+LGA G +H + + G + + +L++ Y C +
Sbjct: 351 QLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGS 410
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKG 324
+ A+ V+ +E + +++I GL GR + A +F + EA NS+++ +++
Sbjct: 411 LEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCA 470
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
+ G VD+ + F +M + V+PEM+ + M+ + E+A++
Sbjct: 471 CSHAGLVDEGRVFFHEM--------EPVYGVVPEMKH----YACMVDILGRAGFLEEAME 518
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
L + +++ + S + L ACS +++ G+L L+K
Sbjct: 519 L---INEMSTTPSASVWGALLGACSLHMNVELGELASDQLLK 557
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 146/309 (47%), Gaps = 26/309 (8%)
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
+ +D ++ LF+++P + N TWN++I Y ++ ++ +++
Sbjct: 72 FSTLDYARNLFDQIP-----------------QPNLYTWNTLIRAYASSSDPFQSFVIFL 114
Query: 388 TMRKLAID-RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
+ D + TF + A S L + + G +H +K F ++Y+ SLV Y C
Sbjct: 115 DLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGAC 174
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G ++ A+ F IS +V +W ++++ ++ +A+ LF M ++++PN+ T VGVL
Sbjct: 175 GDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVL 234
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
SAC + + G + ++ G+ L ++D+ + G + +A++ +MP E D
Sbjct: 235 SACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMP-ERDV 293
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMF--GLDKKPISAYVILSNIYAVLGKWGKKMDIRK 624
W +L ++G+ A ++ + K I+A+ +L + Y GK + + I
Sbjct: 294 FSWTIMLDG-----YAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFN 348
Query: 625 RLTHLEVKK 633
L ++ K
Sbjct: 349 ELQLSKIAK 357
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 29/252 (11%)
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-----PFESNVYVG 436
+LQ + T+ + R S + CS S +Q + +HA +++T PF ++
Sbjct: 10 SLQNFSTLNNNLLFRNHQILSTI-DKCS---SSKQLKEVHARMLRTGLFFDPFSASKLFT 65
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ-DI 495
S + +S +++ A+ F I PN+ W L+ Y+ ++ ++F +L++ +
Sbjct: 66 ASALSSFS---TLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCED 122
Query: 496 VPNAATFVGVLSA-----CVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
+PN TF V+ A R G GM I S+G+ L +V G G L
Sbjct: 123 LPNKFTFPFVIKAASELKASRVGTAVHGMAI---KLSFGM--DLYILNSLVRFYGACGDL 177
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
AE K + + D V W +++SA + E A + ++++ + + +
Sbjct: 178 SMAERLFKGISCK-DVVSWNSMISA---FAQGNCPEDALELFLKMERENVMPNSV--TMV 231
Query: 611 AVLGKWGKKMDI 622
VL KK+D+
Sbjct: 232 GVLSACAKKLDL 243
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 200/668 (29%), Positives = 329/668 (49%), Gaps = 102/668 (15%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V+ + I+ R GQ+ AR FD + + + SWN+++ GY E+ + M
Sbjct: 18 VNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPER 77
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
N+ N L+ G Y IEEA
Sbjct: 78 NI--------------VSWNGLVSG-------------------------YIKNRMIEEA 98
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG- 197
+ VF+ + E N + W+ M+ GYVQ ++ +A +F +MP+++ V WT + G +DG
Sbjct: 99 RNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGL---IDGG 155
Query: 198 -CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFC-EGKVVHGLLIKCGFEFDESI 255
+ A KL+ + MP + V+ + +G C EG+V
Sbjct: 156 RIDDARKLY-------DMMPGK----DVVASTNMIGGLCREGRV---------------- 188
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
D A ++D + + ++I G R++ A +F + E
Sbjct: 189 --------------DEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTE 234
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------ER 361
+S+ SM+ GY + G+++D++ FE MP + +I+ N MI + E+ +R
Sbjct: 235 VSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDR 294
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ TW MI Y + +AL+L+ M++ + + + + C+ L SLQ G+ +H
Sbjct: 295 DNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVH 354
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
AHLV+ F+ +VYV + L+ MY +CG + A+ F S ++ W ++++GY+ HGLG
Sbjct: 355 AHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGE 414
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCV 540
EA+ +F M +PN T + +L+AC G + EG++IF SM+S + V PT+EHY+C
Sbjct: 415 EALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCT 474
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
VD+LGR+G + +A E I M I+ DA VWGALL AC +++ E AA+K+F ++ +
Sbjct: 475 VDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENA 534
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED-RNNPNC 659
Y++LS+I A KWG ++RK + V K PGCSWIE+ +VH F+ RN+P
Sbjct: 535 GPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQ 594
Query: 660 NVIYATLE 667
+I LE
Sbjct: 595 AMILMMLE 602
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 33/220 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+++ N I G G++V AR +FDQM R +W M+ Y + E+L L + M R
Sbjct: 265 VIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQR 324
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V+ + + +ILSVCA L SL G+Q+H +++ ++ +V S L+ Y C E+ +
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVK 384
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AK VFD + ++W+ ++ GY L +A VF +MP +SG
Sbjct: 385 AKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMP----------LSG------- 427
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
MPN+ T +++ AC+ G EG
Sbjct: 428 ----------------TMPNKVTLIAILTACSYGGKLEEG 451
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 161/389 (41%), Gaps = 62/389 (15%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E IVS N ++ +N + ARN+F+ MP R VVSW M+ GY + E+ L
Sbjct: 76 ERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWR 135
Query: 75 MHRSNVKLNETTFSTILSV-----CAQLNSLIDGKQIHCLVLKSGYECFE---------- 119
M N F ++ +L ++ GK + G C E
Sbjct: 136 MPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIF 195
Query: 120 --------FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
+ ++ Y ++ A+++F+ + E E+ W+ ML+GY + DA +
Sbjct: 196 DEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEE 255
Query: 172 VFIKMPKKDVV-------------------------------VWTKLISGYAKSVDGCE- 199
F MP K V+ W +I Y + G E
Sbjct: 256 FFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERK--GFEL 313
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+AL+LF M+ G P+ + S++ CA L + G+ VH L++C F+ D + L
Sbjct: 314 EALELFAQMQRQGVR-PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVL 372
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANS 315
+ Y C A V+DR + + NS+I+G S G E+A +F+ + T N
Sbjct: 373 MTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNK 432
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
++ +++ + G++++ +FE M +
Sbjct: 433 VTLIAILTACSYGGKLEEGLEIFESMESK 461
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 206/670 (30%), Positives = 342/670 (51%), Gaps = 65/670 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G LV R +FD + + WN ++ Y+K + ES+ L M ++ + TF+ +L
Sbjct: 106 GDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVL 165
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
A + + K++H VLK G+ + V + L+ Y C E+E A+ +FDEL +
Sbjct: 166 KGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSD---- 221
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRE 210
+DVV W +ISG +++G + L+ F M
Sbjct: 222 ---------------------------RDVVSWNSMISGC--TMNGFSRNGLEFFIQMLN 252
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G ++ + T +V+ ACA +G G+ +H +K GF L++ Y C +
Sbjct: 253 LGVDV-DSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLN 311
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE---------ANSISY--- 318
GA V+ ++ + + S+I + G +A +F+ + S+ +
Sbjct: 312 GANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACA 371
Query: 319 --NSMIKGYAVYGQVDDSKRLFEKMPHR-----------SIISLNTMISVIPEMERNPVT 365
NS+ KG V+ + + + +P S+ N + S +P +N V+
Sbjct: 372 CSNSLDKGREVHNHIKKN-NMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPV--KNIVS 428
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WN+MI GY QN+L +ALQL++ M+K + T + + AC+ L +L++G+ +H H++
Sbjct: 429 WNTMIGGYSQNSLPNEALQLFLDMQK-QLKPDDVTMACVLPACAGLAALEKGREIHGHIL 487
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ + S+++V +LVDMY +CG + AQ F I ++ WT ++ GY HG G EA+
Sbjct: 488 RKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAIS 547
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY-GVVPTLEHYTCVVDLL 544
FE M I P ++F +L AC +GL+ EG K+F SMKS + P LEHY C+VDLL
Sbjct: 548 TFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLL 607
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
RSG+L A +FI+ MPI+ DA +WGALLS C ++E+ E+ A+ +F L+ + YV
Sbjct: 608 IRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYV 667
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+L+N+YA KW + I++R++ +K D GCSWIE+ + + F D ++P +I +
Sbjct: 668 LLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDS 727
Query: 665 TLEHLTANLN 674
L LT +N
Sbjct: 728 LLRKLTMKMN 737
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 145/595 (24%), Positives = 268/595 (45%), Gaps = 107/595 (17%)
Query: 48 TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIH 107
V N +C + + ++ L+S RS ++LN T+ ++L +CA+L SL DGK++H
Sbjct: 23 VTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKSLEDGKRVH 80
Query: 108 CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
++ +G E +G+ L+F Y NC ++ + +R+FD + D
Sbjct: 81 SIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDK------------------ 122
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
+ +W L+S YAK + +++ LF M+E G + YTF V++
Sbjct: 123 -------------IFLWNLLMSEYAK-IGNYRESVGLFEKMQELGIR-GDSYTFTCVLKG 167
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
A E K VHG ++K GF ++ +LI Y C + A ++D L + + +
Sbjct: 168 FAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSW 227
Query: 288 NSLING----------------LISMGRIEDAELIFNRLTEANSISY------------- 318
NS+I+G ++++G D+ + N L ++
Sbjct: 228 NSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVK 287
Query: 319 ----------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
N+++ Y+ G ++ + +F KM +I+S W S
Sbjct: 288 AGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVS-----------------WTS 330
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
+I+ +V+ LH +A+ L+ M+ + + + HAC+C SL +G+ +H H+ K
Sbjct: 331 IIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNN 390
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
SN+ V +L++MY++CGS+ +A FS + N+ +W ++ GYS + L +EA+ LF
Sbjct: 391 MGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLF- 449
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548
+ +++ + P+ T VL AC + +G +I + G L +VD+ + G
Sbjct: 450 LDMQKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCG 509
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
L A++ DM + D ++W ++ A M G K+ IS +
Sbjct: 510 LLVLAQQLF-DMIPKKDMILWTVMI--------------AGYGMHGFGKEAISTF 549
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 198/645 (30%), Positives = 323/645 (50%), Gaps = 82/645 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTM---------------------LCGYSKWAKF--- 65
+ G +V+AR LFD MP R+VVS+ TM LC +
Sbjct: 160 KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAG 219
Query: 66 -------DESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF 118
++L + M V NE T +++ C I L +KS
Sbjct: 220 FVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDK 279
Query: 119 EF-VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
V + L+ Y + + A+R+FDE+ + + W+ +L Y + + A V +MP
Sbjct: 280 NLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP 339
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+++ V W L++ + + + ++A+ L+ M G PN F SV+ ACA L G
Sbjct: 340 ERNEVSWGTLVARHEQKGNA-KEAVSLYSQMLADGCR-PNISCFSSVLGACASLQDLRSG 397
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
+ +H +K + + ALI+ YC C+
Sbjct: 398 RKIHNQTLKMACSNNVFVSSALIDMYCKCK------------------------------ 427
Query: 298 GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
++ DA++IF L + N + +NS+I GY+ ++ +++ LF+KMP R++ S
Sbjct: 428 -QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVAS--------- 477
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
WNS+ISGY QN AL+ + M TFS + AC+ L SL+ G
Sbjct: 478 --------WNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMG 529
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+++HA ++K + +++VGT+L DMY++ G ++ ++ F + N AWTA++ G + +
Sbjct: 530 KMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAEN 589
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
G E++LLFE M+ I PN TF+ +L AC +GLV M F M++ G+ P +HY
Sbjct: 590 GFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHY 649
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
TC+VD+L R+GHL EAE+ + + + +A W ALLSAC + N E+GERAA+++ LDK
Sbjct: 650 TCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDK 709
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
+ YV+LSN+YA GKW ++R + + +KKD GCSW+++
Sbjct: 710 DNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQI 754
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 51/310 (16%)
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT------- 365
A+ +Y+ M++ + G + ++RLF+ MP RS++S TM+ + M+R V
Sbjct: 146 ASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDAL--MKRGSVRDAVELYR 203
Query: 366 ---------WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
+ +MI+G+V N L + AL ++ M + T + AC G
Sbjct: 204 QCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDL 263
Query: 417 GQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+ +K+ + N+ V SL+ +Y R G + A+ F + +V +WTAL++ Y+
Sbjct: 264 AMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 476 -------------------------------HHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
G EAV L+ ML PN + F
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSS 383
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
VL AC + G KI + + ++D+ + L +A+ +P +
Sbjct: 384 VLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP-QK 442
Query: 565 DAVVWGALLS 574
+ V W +L+S
Sbjct: 443 NIVCWNSLIS 452
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 198/654 (30%), Positives = 327/654 (50%), Gaps = 64/654 (9%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
GR L A +F +MP + WN + + K + + L M S +K T
Sbjct: 720 GRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIV 779
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L C ++ +L KQIH V + G + + + L+ Y+ ++E A+RVFD +
Sbjct: 780 RVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENR 839
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGC-EKALK 203
N W+ M+ Y ++DA+ +F ++ K D+V W L+SG+ + G E+ L
Sbjct: 840 NTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHF--LHGYKEEVLN 897
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
+ + M+ G PN + SV++A + LG GK HG +++ GF+ D +G +LI+ Y
Sbjct: 898 ILQRMQGEGFK-PNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMY 956
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIK 323
+ A V+D ++N N ++NS++
Sbjct: 957 VKNHSLXSAQAVFDNMKN-------------------------------RNIFAWNSLVS 985
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
GY+ G +D+ RL +M I P++ VTWN MISGY KA
Sbjct: 986 GYSFKGMFEDALRLLNQMEKEGIK---------PDL----VTWNGMISGYAMWGCARKAF 1032
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
++ + L AC+ L LQ+G+ +H ++ F +V+V T+L+DMY
Sbjct: 1033 M-----------PNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMY 1081
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
S+ S+ +A F I + +A+W ++ G++ GLG EA+ +F M + + P+A TF
Sbjct: 1082 SKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFT 1141
Query: 504 GVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+LSAC +GL+ EG K F SM Y +VP LEHY C+VDLLGR+G+L EA + I MP+
Sbjct: 1142 ALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPL 1201
Query: 563 ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
+ DA +WGALL +C N+ E AA+ +F L+ + Y+++ N+Y++ +W +
Sbjct: 1202 KPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHL 1261
Query: 623 RKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
R+ + V+ SWI++N RVH FS +++ +P+ IY L L + + +
Sbjct: 1262 RELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKL 1315
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 169/363 (46%), Gaps = 56/363 (15%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS-------KWAKF--------- 65
N I+ +NG+L AR +FD M R SWN+M+ Y+ W+ F
Sbjct: 814 NPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMK 873
Query: 66 -------------------DESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
+E L+++ M K N ++ +++L ++L L GK+
Sbjct: 874 PDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKET 933
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H VL++G++C +VG+ L+ Y + A+ VFD + N W+ ++ GY +
Sbjct: 934 HGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMF 993
Query: 167 SDAFDVFIKMPKK----DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
DA + +M K+ D+V W +ISGYA + GC A K F MPN +
Sbjct: 994 EDALRLLNQMEKEGIKPDLVTWNGMISGYA--MWGC--ARKAF---------MPNSASIT 1040
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
++RACA L +GK +H L I+ GF D + ALI+ Y + A +V+ R++N
Sbjct: 1041 CLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNK 1100
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLF 338
L + N +I G G ++A +FN + + ++I++ +++ G + + + F
Sbjct: 1101 TLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYF 1160
Query: 339 EKM 341
+ M
Sbjct: 1161 DSM 1163
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 205/680 (30%), Positives = 346/680 (50%), Gaps = 57/680 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++STN I ++G L TAR+LFD M R+VV+W ++ GY++ +F E+ +L + M R
Sbjct: 73 VISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCR 132
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + T +T+LS + S+ + Q+H V+K GY+ V + LL
Sbjct: 133 HGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLL----------- 181
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
Y + + A +F M +KD V + L++GY+K
Sbjct: 182 --------------------DSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFN 221
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
A+ LF M++ G P+E+TF +V+ A ++ G+ VH ++KC F ++ +
Sbjct: 222 -HDAINLFFKMQDLGFR-PSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVAN 279
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-----ELIFNRLTE 312
AL++FY + A +++ + + N LI GR+E++ EL F R
Sbjct: 280 ALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDR 339
Query: 313 AN-------SISYNSM--IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER-- 361
SI+ NS+ G ++ Q + + E + S++ + E R
Sbjct: 340 RQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIF 399
Query: 362 ------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
+ V W ++ISGYVQ LHE L+L++ M + I +T++ + AC+ L SL
Sbjct: 400 ADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLT 459
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G+ LH+ ++++ SNV+ G++LVDMY++CGSI +A F + N +W AL++ Y+
Sbjct: 460 LGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYA 519
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTL 534
+G G A+ FE M+ + PN+ +F+ +L AC GLV EG++ F SM + Y + P
Sbjct: 520 QNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRR 579
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY +VD+L RSG EAE+ + MP E D ++W ++L++C N E+ +AA ++F
Sbjct: 580 EHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFN 639
Query: 595 LDK-KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
+ + + YV +SNIYA G+W ++K L ++K P SW+E+ + H FS D
Sbjct: 640 MKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSAND 699
Query: 654 RNNPNCNVIYATLEHLTANL 673
++P I L+ L +
Sbjct: 700 TSHPQTKEITRKLDELEKQM 719
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/534 (22%), Positives = 223/534 (41%), Gaps = 96/534 (17%)
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD-------------------------- 180
+ N ++ + ++Q + A +F +MP K+
Sbjct: 39 DPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDS 98
Query: 181 -----VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFC 235
VV WT LI GYA+ E A LF M G +P+ T +++ +
Sbjct: 99 MVQRSVVTWTMLIGGYAQHNRFLE-AFNLFADMCRHGM-VPDHITLATLLSGFTEFESVN 156
Query: 236 EGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI 295
E VHG ++K G++ + +L++ YC + A ++ + N+L+ G
Sbjct: 157 EVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYS 216
Query: 296 SMGRIEDAELIFNRLTEA---------------------------------------NSI 316
G DA +F ++ + N
Sbjct: 217 KEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVF 276
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
N+++ Y+ + ++ ++++LF +MP IS N +I+ WN +
Sbjct: 277 VANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITC--------CAWNGRV------ 322
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
E++L+L+ ++ DR + F+ L + +L+ G+ +H+ + T S V VG
Sbjct: 323 ---EESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVG 379
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
SLVDMY++C +A F+ ++ + WTAL++GY GL + + LF M I
Sbjct: 380 NSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIG 439
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
++AT+ +L AC + G ++ + G + + + +VD+ + G + EA +
Sbjct: 440 ADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQM 499
Query: 557 IKDMPIELDAVVWGALLSACWFWMNMEVGE--RAAQKMF--GLDKKPISAYVIL 606
++MP+ ++V W AL+SA + N + G R+ ++M GL +S IL
Sbjct: 500 FQEMPVR-NSVSWNALISA--YAQNGDGGHALRSFEQMIHSGLQPNSVSFLSIL 550
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/539 (22%), Positives = 235/539 (43%), Gaps = 58/539 (10%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
TL+V + + C + L A +LF M + V++N +L GYSK ++++L M
Sbjct: 173 TLMVCNSLLDSYC-KTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKM 231
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ +E TF+ +L+ Q++ + G+Q+H V+K + FV + LL FY+ I
Sbjct: 232 QDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRI 291
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
EA+++F E MP+ D + + LI+ A +
Sbjct: 292 VEARKLFYE-------------------------------MPEVDGISYNVLITCCAWN- 319
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
E++L+LFR ++ + + ++ F +++ A G+ +H I + +
Sbjct: 320 GRVEESLELFRELQFTRFDR-RQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLV 378
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE--- 312
G +L++ Y C+ F A R++ L + +LI+G + G ED +F +
Sbjct: 379 GNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKI 438
Query: 313 -ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII-----------------SLNTMIS 354
A+S +Y S+++ A + K+L ++ + S+ +
Sbjct: 439 GADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQ 498
Query: 355 VIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
+ EM RN V+WN++IS Y QN AL+ + M + +F + ACS G
Sbjct: 499 MFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGL 558
Query: 414 LQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
+++G Q ++ E S+VDM R G ++A+ + + P+ W++++
Sbjct: 559 VEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSIL 618
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
N H A+ + + + +AA +V + + AG + K+ ++++ G+
Sbjct: 619 NSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGI 677
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 32/189 (16%)
Query: 418 QLLHAHLVKTPFE-------------------------------SNVYVGTSLVDMYSRC 446
Q + A ++KT F+ NV +++ Y +
Sbjct: 27 QHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKS 86
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G+++ A++ F S+ +V WT L+ GY+ H EA LF M +VP+ T +L
Sbjct: 87 GNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLL 146
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
S VNE ++ + G TL ++D ++ L A K M E D
Sbjct: 147 SGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMA-EKDN 205
Query: 567 VVWGALLSA 575
V + ALL+
Sbjct: 206 VTFNALLTG 214
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 207/651 (31%), Positives = 338/651 (51%), Gaps = 53/651 (8%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L AR +FD M + VV+WN+M+ GY + E++ + M ++ T +
Sbjct: 228 GKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVA 287
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+ LS A L++LI+GKQ H + + + + +GS ++ FY+
Sbjct: 288 SFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYS------------------ 329
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ L+ DA VF +M +KDVV W LIS Y + KAL + M
Sbjct: 330 -------------KVGLIEDAELVFSRMLEKDVVTWNLLISSYVQH-HQVGKALNMCHLM 375
Query: 209 RESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
R EN+ + T S++ A A GK H I+ E D + ++I+ Y CE
Sbjct: 376 RS--ENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCE 433
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK 323
D A +V+D L N+L+ +G +A +F ++ N IS+NS+I
Sbjct: 434 RIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVIL 493
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
G+ GQV+++K +F +M SL + N +TW ++ISG Q+ +A+
Sbjct: 494 GFLRNGQVNEAKDMFSQMQ-----SLG--------FQPNLITWTTLISGLAQSGFGYEAI 540
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+ M++ I + ++ + + AC+ + SL G+ +H + + F +V V TSLVDMY
Sbjct: 541 LFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMY 600
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++CGSI++A+ F +SS + + A+++ Y+ HG EA+ LF+ + ++ I P++ TF
Sbjct: 601 AKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFT 660
Query: 504 GVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+LSAC AGLVNEG+ +F M S + + P +EHY CVV LL R G+L EA I MP
Sbjct: 661 SILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPF 720
Query: 563 ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
+ DA + G+LL+AC +E+GE ++ +F L+ YV LSN YA G+W + ++
Sbjct: 721 QPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNM 780
Query: 623 RKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
R + ++K+PGCSWI+ +++ F D ++P IYA L L + +
Sbjct: 781 RDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEM 831
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 248/524 (47%), Gaps = 57/524 (10%)
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG--YECF 118
K ES+ L+S M + ++ + +L C +L G+QIH +LK+G +
Sbjct: 56 KDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKN 115
Query: 119 EFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK 178
E+V + L+ FYA C E A R+F L N W+ +VG +QC +
Sbjct: 116 EYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWA-AIVG-LQCRM------------- 160
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
G++ E AL F M+E+G P+ + +V++AC L GK
Sbjct: 161 -----------GFS------EDALLGFIEMQENGV-FPDNFVLPNVLKACGSLQLIGLGK 202
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
VHG ++K GF + +L++ Y C + A +V+D + + NS+I G + G
Sbjct: 203 GVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNG 262
Query: 299 RIEDAELIF----------NRLTEAN----SISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
++A +F R+T A+ S + +++I+G + + + +
Sbjct: 263 LNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGS 322
Query: 345 SIISLNTMISVIPE--------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
SII+ + + +I + +E++ VTWN +IS YVQ++ KAL + MR +
Sbjct: 323 SIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRF 382
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
T S + A + +++ G+ H + ++ ES+V V S++DMY++C I+DA+ F
Sbjct: 383 DSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVF 442
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
S + ++ W L+ Y+ GL EA+ LF M + PN ++ V+ +R G VN
Sbjct: 443 DSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVN 502
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
E +F M+S G P L +T ++ L +SG +EA F + M
Sbjct: 503 EAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKM 546
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 178/400 (44%), Gaps = 67/400 (16%)
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCG--FEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
+ +++ C A G+ +H ++K G F +E + L+ FY C+ + A+R++ R
Sbjct: 82 YGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHR 141
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYN------------------- 319
L + + +++ MG EDA L F + E N
Sbjct: 142 LRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLG 201
Query: 320 --------------------SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
S++ Y G ++D++++F+ M +
Sbjct: 202 KGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSM-----------------V 244
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
E+N VTWNSMI GYVQN L+++A+ ++ MR I+ TR T + A + L +L +G+
Sbjct: 245 EKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQ 304
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
HA + + + +G+S+++ YS+ G I DA+ FS + +V W L++ Y H
Sbjct: 305 GHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQ 364
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
+A+ + +M +++ ++ T +LSA V +K+ + Y + LE
Sbjct: 365 VGKALNMCHLMRSENLRFDSVTLSSILSASA----VTSNIKLGKEGHCYCIRRNLESDVV 420
Query: 540 V----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
V +D+ + + +A + + D E D V+W LL+A
Sbjct: 421 VANSIIDMYAKCERIDDARK-VFDSTTERDLVLWNTLLAA 459
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 29/283 (10%)
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
RN +W +++ + E AL ++ M++ + + AC L + G+ +
Sbjct: 145 RNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGV 204
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H +++K F + V+V +SLVDMY +CG + DA+ F S+ NV W +++ GY +GL
Sbjct: 205 HGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLN 264
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG-----MKIFRSMKSYGVVPTLE 535
EA+ +F M + I P T LSA + EG + I S+ ++
Sbjct: 265 QEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILG--- 321
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
+ +++ + G + +AE M +E D V W L+S+ + + +VG+ A M L
Sbjct: 322 --SSIINFYSKVGLIEDAELVFSRM-LEKDVVTWNLLISS--YVQHHQVGK--ALNMCHL 374
Query: 596 DKKP------------ISAYVILSNIYAVLGKWGKKMDIRKRL 626
+ +SA + SNI LGK G IR+ L
Sbjct: 375 MRSENLRFDSVTLSSILSASAVTSNIK--LGKEGHCYCIRRNL 415
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 136/322 (42%), Gaps = 42/322 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPI----RTVVSWNTMLCGYSKWAKFDESLSLVS 73
++S N I RNGQ+ A+++F QM +++W T++ G ++ E++
Sbjct: 485 VISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQ 544
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M + ++ + + +++L C + SL G+ IH + + + V + L+ YA C
Sbjct: 545 KMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCG 604
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
I+EAK+VF M K++ ++ +IS YA
Sbjct: 605 SIDEAKKVFH-------------------------------MMSSKELPIYNAMISAYAL 633
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFD 252
E AL LF+ +++ G P+ TF S++ AC+ G EG + ++ K
Sbjct: 634 HGQAVE-ALALFKHLQKEGIE-PDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPI 691
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFN--- 308
G ++ C D A+R+ + P + SL+ IE E +
Sbjct: 692 MEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLF 751
Query: 309 RLTEANSISYNSMIKGYAVYGQ 330
+L +NS +Y ++ YA G+
Sbjct: 752 KLEPSNSGNYVALSNAYAAAGR 773
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 212/682 (31%), Positives = 331/682 (48%), Gaps = 90/682 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR+ FD MP R V WN M+ GY K ++ L M S + N T + L
Sbjct: 190 GLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFL 249
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
SVCA L+ G Q+H L +K G E V + LL YA
Sbjct: 250 SVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYA--------------------- 288
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+C + DA+ +F +P+ D+V W +ISG ++ ++AL LF M S
Sbjct: 289 ----------KCRCLDDAWRLFELLPRDDLVTWNGMISGCVQN-GLLDEALGLFCDMLRS 337
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+ T S++ A L +GK VHG +I+ D + AL++ Y C
Sbjct: 338 GAR-PDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRT 396
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKG--- 324
A +YD + +++I+G + G E A +F L E N+++ S++
Sbjct: 397 ARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACAS 456
Query: 325 --------------------------------YAVYGQVDDSKRLFEKMPHRSIISLNTM 352
YA G++D S +F KM SL
Sbjct: 457 ISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKM------SL--- 507
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
++ VTWNSMIS + QN ++AL L+ M I T S AC+ L
Sbjct: 508 --------KDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLP 559
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
++ G+ +H ++K P +++++ ++L+DMY++CG++ A F + N +W ++++
Sbjct: 560 AIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIIS 619
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVV 531
Y HGL E+V M E+ P+ TF+ ++SAC AGLV EG+++F+ M K Y +
Sbjct: 620 AYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIA 679
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P +EH+ C+VDL RSG L +A +FI DMP + DA +WGALL AC N+E+ + A+Q+
Sbjct: 680 PRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQE 739
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+F LD YV++SNI AV G+W +R+ + ++ K PG SW+++N+ H F
Sbjct: 740 LFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVA 799
Query: 652 EDRNNPNCNVIYATLEHLTANL 673
D+++P IY +L+ L L
Sbjct: 800 SDKSHPESEDIYTSLKALLQEL 821
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/579 (22%), Positives = 251/579 (43%), Gaps = 71/579 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVS---------WNTMLCGYSKWAKFDESLSLVSTM--HRSNV 80
G V AR D + + + + WN ++ G++ ++ M H +
Sbjct: 78 GMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAP 137
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ T ++ CA L ++ G+ +H +G +VGS L+ Y++ + +A+
Sbjct: 138 SPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARD 197
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
FD + + +LW++M+ GY++ A V G
Sbjct: 198 AFDGMPWRDCVLWNVMMDGYIK-----------------------------AGDVGG--- 225
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
A++LFR MR SG PN T + CA G +H L +KCG E + ++ L+
Sbjct: 226 AVRLFRNMRVSGCE-PNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLL 284
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF------------- 307
Y C D A R+++ L L N +I+G + G +++A +F
Sbjct: 285 SMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSV 344
Query: 308 ------NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH-----RSIISLNTMISVI 356
LT+ N + + GY + V L + R + + +
Sbjct: 345 TLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAA 404
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
++ V +++ISGYV N + EKALQ++ + + I T + + AC+ + +L
Sbjct: 405 RAIDV--VIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPL 462
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
GQ +H ++++ +E YV ++L+DMY++CG ++ + FS +S + W ++++ +S
Sbjct: 463 GQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQ 522
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
+G EA+ LF M + I N T LSAC + G +I + + +
Sbjct: 523 NGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFA 582
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ ++D+ + G++ A + MP + + V W +++SA
Sbjct: 583 ESALIDMYAKCGNMELALRVFEFMP-DKNEVSWNSIISA 620
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 120/281 (42%), Gaps = 18/281 (6%)
Query: 299 RIEDAELIFNRLTEANSISYNSMIKG-YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
+I ++ L+ N ++ ++ + G Y + + D+ +F +P + S
Sbjct: 53 QIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAGS--------- 103
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTM--RKLAIDRTRSTFSVLFHACSCLGSLQ 415
+ WN +I G+ H A+ Y+ M A T + +C+ LG++
Sbjct: 104 -----SLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVS 158
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G+L+H T S+VYVG++L+ MYS G + DA+ +F + + W +M+GY
Sbjct: 159 LGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYI 218
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
G AV LF M PN AT LS C + G+++ G+ +
Sbjct: 219 KAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVA 278
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
++ + + L +A + +P + D V W ++S C
Sbjct: 279 VANTLLSMYAKCRCLDDAWRLFELLPRD-DLVTWNGMISGC 318
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 198/645 (30%), Positives = 323/645 (50%), Gaps = 82/645 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTM---------------------LCGYSKWAKF--- 65
+ G +V+AR LFD MP R+VVS+ TM LC +
Sbjct: 160 KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAG 219
Query: 66 -------DESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF 118
++L + M V NE T +++ C I L +KS
Sbjct: 220 FVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDK 279
Query: 119 EF-VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
V + L+ Y + + A+R+FDE+ + + W+ +L Y + + A V +MP
Sbjct: 280 NLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP 339
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+++ V W L++ + + + ++A+ L+ M G PN F SV+ ACA L G
Sbjct: 340 ERNEVSWGTLVARHEQKGNA-KEAVSLYSQMLADG-CRPNISCFSSVLGACASLQDLRSG 397
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
+ +H +K + + ALI+ YC C+
Sbjct: 398 RKIHNQTLKMACSNNVFVSSALIDMYCKCK------------------------------ 427
Query: 298 GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
++ DA++IF L + N + +NS+I GY+ ++ +++ LF+KMP R++ S
Sbjct: 428 -QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVAS--------- 477
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
WNS+ISGY QN AL+ + M TFS + AC+ L SL+ G
Sbjct: 478 --------WNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMG 529
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+++HA ++K + +++VGT+L DMY++ G ++ ++ F + N AWTA++ G + +
Sbjct: 530 KMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAEN 589
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
G E++LLFE M+ I PN TF+ +L AC +GLV M F M++ G+ P +HY
Sbjct: 590 GFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHY 649
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
TC+VD+L R+GHL EAE+ + + + +A W ALLSAC + N E+GERAA+++ LDK
Sbjct: 650 TCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDK 709
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
+ YV+LSN+YA GKW ++R + + +KKD GCSW+++
Sbjct: 710 DNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQI 754
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 51/310 (16%)
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT------- 365
A+ +Y+ M++ + G + ++RLF+ MP RS++S TM+ + M+R V
Sbjct: 146 ASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDAL--MKRGSVRDAVELYR 203
Query: 366 ---------WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
+ +MI+G+V N L + AL ++ M + T + AC G
Sbjct: 204 QCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDL 263
Query: 417 GQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+ +K+ + N+ V SL+ +Y R G + A+ F + +V +WTAL++ Y+
Sbjct: 264 AMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 476 -------------------------------HHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
G EAV L+ ML PN + F
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSS 383
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
VL AC + G KI + + ++D+ + L +A+ +P +
Sbjct: 384 VLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP-QK 442
Query: 565 DAVVWGALLS 574
+ V W +L+S
Sbjct: 443 NIVCWNSLIS 452
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 207/655 (31%), Positives = 336/655 (51%), Gaps = 73/655 (11%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSW-------------------------- 52
VS N I +G++ AR+LFD+MP+R SW
Sbjct: 81 VSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPGD 140
Query: 53 ------NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
N M+ GY+K +FD+++ L+ M ++ ++++ L+ Q ++ Q
Sbjct: 141 KCTACYNAMISGYAKNGRFDDAMKLLREMPAPDL----VSWNSALAGLTQSGEMVRAVQF 196
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
++K + + +G + ++ A F ++ N + W +L GY + +
Sbjct: 197 FDEMVKD-MTSWNLMLAG----FVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRI 251
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP--NEYTFDSV 224
+DA D+F +MP+++VV W ++ GY + E+A KLF + MP N ++ ++
Sbjct: 252 ADARDLFDRMPERNVVAWNVMLDGYVH-LSPIEEACKLF-------DEMPIKNSISWTTI 303
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
I AR G E K LL K F + AL+ Y D A R++D +E
Sbjct: 304 ISGLARAGKLQEAK---DLLDKMSFNC-VAAKTALMHGYLQRNMADDARRIFDGMEVHDT 359
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
N++I+G + G +E+A L+F R+ + +S+N+MI GYA GQ+ + +F +M
Sbjct: 360 VCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMN-- 417
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
RN V+WNS+ISG+VQN+ AL +M MR+ ST++
Sbjct: 418 ---------------RRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASC 462
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
AC+ L L G+ LH LV++ ++ + G +L+ Y++CG I +A+ F + ++
Sbjct: 463 LRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDI 522
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
+W AL++GY+ +G G+EA+ +F M + P+ TFVG+LSAC AGL++EG+ F S
Sbjct: 523 VSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYS 582
Query: 525 M-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
M K Y + P EHY C+VDLLGR+G L+EA E ++ M I+ +A VWGALL AC N E
Sbjct: 583 MTKEYLLKPVAEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHE 642
Query: 584 VGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
+ + AA+++ L+ + S YV+LSNI A GKW + R + V K PG +
Sbjct: 643 LAQLAAERLSELEPRKASNYVLLSNISAEAGKWDESEKARASIKEKGVNKPPGLA 697
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 148/305 (48%), Gaps = 32/305 (10%)
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
A R++D + N++++ L GRI++A +F+ + N++S+N+MI + +G+
Sbjct: 36 AARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGR 95
Query: 331 VDDSKRLFEKMPHRSIISLNTMIS-------------VIPEMERNPVT--WNSMISGYVQ 375
V D++ LF++MP R S M+S V+ M + T +N+MISGY +
Sbjct: 96 VADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPGDKCTACYNAMISGYAK 155
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N + A++L +R++ S S L G Q G+++ A ++
Sbjct: 156 NGRFDDAMKL---LREMPAPDLVSWNSAL------AGLTQSGEMVRAVQFFDEMVKDMTS 206
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
++ + R G +N A + F+ I SPNV +W L+NGY G ++A LF+ M E+++
Sbjct: 207 WNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMPERNV 266
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
V + +L V + E K+F M + +T ++ L R+G L EA++
Sbjct: 267 V----AWNVMLDGYVHLSPIEEACKLFDEMPIKNSIS----WTTIISGLARAGKLQEAKD 318
Query: 556 FIKDM 560
+ M
Sbjct: 319 LLDKM 323
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 33/220 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS N I ++GQ+ A +F +M R VSWN+++ G+ + +F ++L M R
Sbjct: 390 MVSWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRR 449
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + +T+++ L CA L L G+Q+H L+++SG+ F G+ L+ YA C I E
Sbjct: 450 GTNRADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILE 509
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AK++FDE+ + + W+ ++ G YA + G
Sbjct: 510 AKQIFDEMVYKDIVSWNALIDG-------------------------------YASNGQG 538
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
E A+ +FR M +G P+E TF ++ AC+ G EG
Sbjct: 539 TE-AIAVFREMEANGVR-PDEVTFVGILSACSHAGLIDEG 576
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 199/667 (29%), Positives = 338/667 (50%), Gaps = 63/667 (9%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
MP R VVSWN+++ GY++ + E ++L S+++L++ TFS LSVC + L G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
+ IH L+ SG + + L+ Y C I+ A+ VF+ E + + W+ ++ GYV+
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR- 119
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+ ++ L+L M G N+ N Y S
Sbjct: 120 -------------------------------IGSNDEMLRLLVKMLRHGLNL-NSYALGS 147
Query: 224 VIRAC-ARLGAFCE-GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
++AC + + E GK++HG +K G + D +G AL++ Y + A +++ + +
Sbjct: 148 ALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPD 207
Query: 282 PCLNASNSLINGLISMGRIED-----AELIF----NRLTEANSISYNSMIK--------- 323
P + N++I G + M + D A +F +R + + +++S++K
Sbjct: 208 PNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFE 267
Query: 324 -GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE----MERNP----VTWNSMISGYV 374
G ++ Q+ ++ +++ L ++ I + P V+W S+I G+V
Sbjct: 268 CGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHV 327
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
QN E L L+ + T S++ AC+ L +++ G+ +HA+ +KT +
Sbjct: 328 QNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTI 387
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+ S + MY++CG I+ A +F +P++ +W+ +++ + HG EAV LFE+M
Sbjct: 388 IQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSG 447
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
I PN TF+GVL AC GLV EG++ F M K +G+ P ++H C+VDLLGR+G L EA
Sbjct: 448 IAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEA 507
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
E FI D E D V+W +LLSAC + G+R A+++ L+ + ++YV+L NIY
Sbjct: 508 ESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDA 567
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
G +IR + VKK+PG SWIE+ + VH+F DR++PN VIY LE + +
Sbjct: 568 GIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEI 627
Query: 674 NSVVLFD 680
+ D
Sbjct: 628 KKLDYID 634
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/540 (24%), Positives = 239/540 (44%), Gaps = 57/540 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++ TN I + G++ AR +F+ VSWN+++ GY + DE L L+ M R
Sbjct: 76 VLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLR 135
Query: 78 SNVKLNETTFSTILSVC-AQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ LN + L C + +S I+ GK +H +K G + VG+ LL YA ++
Sbjct: 136 HGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDL 195
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
E+A ++F + + N ++++ M+ G++Q M+D F
Sbjct: 196 EDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEF------------------------- 230
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+A+ LF M+ G P+E+TF S+++AC+ + AF GK +H + K + DE I
Sbjct: 231 --ANEAMYLFFEMQSRGMK-PSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFI 287
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----T 311
G AL+E Y + + ++ + + + SLI G + G+ E +F+ L
Sbjct: 288 GNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGR 347
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI----ISLNTMISVIPEM-------- 359
+ + + + M+ A V +++ I I N+ I + +
Sbjct: 348 KPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANM 407
Query: 360 ----ERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
+NP V+W+ MIS Q+ ++A+ L+ M+ I TF + ACS G
Sbjct: 408 TFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGL 467
Query: 414 LQQGQLLHAHLVKTP--FESNVYVGTSLVDMYSRCGSINDAQA-SFSSISSPNVAAWTAL 470
+++G L + ++K NV +VD+ R G + +A++ S + W +L
Sbjct: 468 VEEG-LRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSL 526
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
++ H + E ++E + AA++V + + AG+ +I MK GV
Sbjct: 527 LSACRVHKATDTGKRVAERVIELE-PEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGV 585
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 198/645 (30%), Positives = 323/645 (50%), Gaps = 82/645 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTM---------------------LCGYSKWAKF--- 65
+ G +V+AR LFD MP R+VVS+ TM LC +
Sbjct: 160 KAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAG 219
Query: 66 -------DESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF 118
++L + M V NE T +++ C I L +KS
Sbjct: 220 FVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDK 279
Query: 119 EF-VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
V + L+ Y + + A+R+FDE+ + + W+ +L Y + + A V +MP
Sbjct: 280 NLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP 339
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+++ V W L++ + + + ++A+ L+ M G PN F SV+ ACA L G
Sbjct: 340 ERNEVSWGTLVARHEQKGNA-KEAVSLYSQMLADGCR-PNISCFSSVLGACASLQDLRSG 397
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
+ +H +K + + ALI+ YC C+
Sbjct: 398 RKIHNQTLKMACSNNVFVSSALIDMYCKCK------------------------------ 427
Query: 298 GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
++ DA++IF L + N + +NS+I GY+ ++ +++ LF+KMP R++ S
Sbjct: 428 -QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVAS--------- 477
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
WNS+ISGY QN AL+ + M TFS + AC+ L SL+ G
Sbjct: 478 --------WNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMG 529
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+++HA ++K + +++VGT+L DMY++ G ++ ++ F + N AWTA++ G + +
Sbjct: 530 KMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAEN 589
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
G E++LLFE M+ I PN TF+ +L AC +GLV M F M++ G+ P +HY
Sbjct: 590 GFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHY 649
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
TC+VD+L R+GHL EAE+ + + + +A W ALLSAC + N E+GERAA+++ LDK
Sbjct: 650 TCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDK 709
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
+ YV+LSN+YA GKW ++R + + +KKD GCSW+++
Sbjct: 710 DNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQI 754
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 51/310 (16%)
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT------- 365
A+ +Y+ M++ + G + ++RLF+ MP RS++S TM+ + M+R V
Sbjct: 146 ASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDAL--MKRGSVRDAVELYR 203
Query: 366 ---------WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
+ +MI+G+V N L + AL ++ M + T + AC G
Sbjct: 204 QCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDL 263
Query: 417 GQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+ +K+ + N+ V SL+ +Y R G + A+ F + +V +WTAL++ Y+
Sbjct: 264 AMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 476 -------------------------------HHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
G EAV L+ ML PN + F
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSS 383
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
VL AC + G KI + + ++D+ + L +A+ +P +
Sbjct: 384 VLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP-QK 442
Query: 565 DAVVWGALLS 574
+ V W +L+S
Sbjct: 443 NIVCWNSLIS 452
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 197/666 (29%), Positives = 335/666 (50%), Gaps = 57/666 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A +FD++ I + WN ++ +K F S+ L M S V+++ TFS +
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ L S+ G+Q+H +LKSG+ VG+ L+ FY ++ A++VFDE+ E + +
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ++ GYV L VF++M L+SG +
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQM----------LVSGIEIDL---------------- 296
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
T SV CA G+ VH + +K F ++ L++ Y C D
Sbjct: 297 -------ATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAV 327
A V+ + + + + S+I G G +A +F + E + + +++ A
Sbjct: 350 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 409
Query: 328 YGQVDDSKRLFEKMPHR----SIISLNTMIS-------------VIPEME-RNPVTWNSM 369
Y +D+ KR+ E + I N ++ V EM ++ ++WN++
Sbjct: 410 YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTI 469
Query: 370 ISGYVQNNLHEKALQLY-MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
I GY +N +AL L+ + + + T + + AC+ L + +G+ +H ++++
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
+ S+ +V SLVDMY++CG++ A F I+S ++ +WT ++ GY HG G EA+ LF
Sbjct: 530 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRS 547
M + I + +FV +L AC +GLV+EG + F M+ + PT+EHY C+VD+L R+
Sbjct: 590 QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLART 649
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L +A FI++MPI DA +WGALL C ++++ E+ A+K+F L+ + YV+++
Sbjct: 650 GDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMA 709
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NIYA KW + +RKR+ ++K+PGCSWIE+ RV+ F D +NP I A L
Sbjct: 710 NIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLR 769
Query: 668 HLTANL 673
+ A +
Sbjct: 770 KVRARM 775
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/569 (24%), Positives = 256/569 (44%), Gaps = 93/569 (16%)
Query: 47 RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
R+V NT L + + + ++ L+ + ++ + T ++L +CA SL DGK++
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEV 116
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
+ +G+ +GS L Y NC +++EA RVFDE
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE---------------------- 154
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
+K+ K + W L++ AKS D ++ LF+ M SG M + YTF V +
Sbjct: 155 -------VKIEK--ALFWNILMNELAKSGD-FSGSIGLFKKMMSSGVEM-DSYTFSCVSK 203
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
+ + L + G+ +HG ++K GF S+G +L+ FY + D A +V+D + + +
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 287 SNSLINGLISMGRIEDAELIFNRL-------------------TEANSISY--------- 318
NS+ING +S G E +F ++ ++ IS
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 319 -----------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
N+++ Y+ G +D +K +F +M RS++S +
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS-----------------YT 366
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
SMI+GY + L +A++L+ M + I T + + + C+ L +G+ +H + +
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN 426
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+++V +L+DMY++CGS+ +A+ FS + ++ +W ++ GYS + +EA+ LF
Sbjct: 427 DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF 486
Query: 488 EIMLEQD-IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
++LE+ P+ T VL AC ++G +I + G +VD+ +
Sbjct: 487 NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 546
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G L A D+ + D V W +++
Sbjct: 547 CGALLLAHMLFDDIASK-DLVSWTVMIAG 574
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 206/473 (43%), Gaps = 58/473 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+N ++ +AR +FD+M R V+SWN+++ GY ++ LS+ M S ++++ T +
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+ + CA + G+ +H + +K+ + + + LL Y+ C +++ AK VF E+ + +
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ ++ M+ GY + L + A+KLF M
Sbjct: 362 VVSYTSMIAGYAREGLAGE--------------------------------AVKLFEEME 389
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E G + P+ YT +V+ CAR EGK VH + + FD + AL++ Y C +
Sbjct: 390 EEGIS-PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI------------- 316
A V+ + + + N++I G +A +FN L E
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 317 --SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI--------PEMERNPVTW 366
S ++ KG ++G + + ++ S++ + + ++ V+W
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLV 425
MI+GY + ++A+ L+ MR+ I+ +F L +ACS G + +G + +
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
+ E V +VDM +R G + A ++ P+ W AL+ G H
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 16/256 (6%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS-TMH 76
I +N + + G + A +F +M ++ ++SWNT++ GYSK +E+LSL + +
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+E T + +L CA L++ G++IH ++++GY V + L+ YA C +
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 551
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK----KDVVVWTKLISGYA 192
A +FD++ + + W++M+ GY +A +F +M + D + + L+ YA
Sbjct: 552 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL--YA 609
Query: 193 KSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFE 250
S G ++ + F MR + P + ++ AR G + + + + I
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP--- 666
Query: 251 FDESIGGALIEFYCGC 266
D +I GAL+ CGC
Sbjct: 667 -DATIWGALL---CGC 678
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
S+ +++ + I +R+ N+ + + ++ E A++L K ID R+ SVL
Sbjct: 43 SLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDID-PRTLCSVL 101
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
C+ SL+ G+ + + F + +G+ L MY+ CG + +A F +
Sbjct: 102 -QLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKA 160
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
W LMN + G S ++ LF+ M+ + ++ TF
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 210/694 (30%), Positives = 340/694 (48%), Gaps = 96/694 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD M R V WN M+ GY K ++ L M S N T + L
Sbjct: 196 GLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFL 255
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
SVCA L+ G Q+H L +K G E V + L+ YA C +EEA R+F + D+ +
Sbjct: 256 SVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLV 315
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ G VQ L+ D AL+LF M++S
Sbjct: 316 TWNGMISGCVQNGLVDD--------------------------------ALRLFCDMQKS 343
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+ T S++ A L F +GK +HG +++ D + AL++ Y C
Sbjct: 344 GLQ-PDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRM 402
Query: 272 AMRVYDRLENPCLNASNSLING----------------LISMGRIEDAELIFNRLTEANS 315
A V+D ++ + +++I+G L+++G +A ++ + L S
Sbjct: 403 AQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACAS 462
Query: 316 ISY-----------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
++ ++++ Y+ G++D S +F KM
Sbjct: 463 MAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMS---------- 512
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
++ VTWNSMIS + QN E+AL L+ M + T S + AC+ L
Sbjct: 513 -------AKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLP 565
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
++ G+ +H ++K P ++++ ++L+DMY +CG++ A F + N +W ++++
Sbjct: 566 AIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIIS 625
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVV 531
Y HGL E+V L M E+ + TF+ ++SAC AG V EG+++FR M + Y +
Sbjct: 626 AYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIE 685
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P +EH +C+VDL R+G L +A +FI DMP + DA +WGALL AC N+E+ E A+Q+
Sbjct: 686 PQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQE 745
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+F LD YV++SNI AV G+W +R+ + +V+K PG SW+++N+ H F
Sbjct: 746 LFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVA 805
Query: 652 EDRNNPNCNVIYATLEHLT------ANLNSVVLF 679
D+N+P+ IY +L+ L N N +V+F
Sbjct: 806 ADKNHPDSEEIYMSLKSLIIELKQEGNGNLIVMF 839
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/577 (23%), Positives = 256/577 (44%), Gaps = 67/577 (11%)
Query: 32 GQLVTARNLFDQMPIRT---------VVSWNTMLCGYSKWAKFDESLSLVSTM--HRSNV 80
G V AR D + + + + WN ++ G++ ++ M H S+
Sbjct: 84 GMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSP 143
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ + T ++ CA L +L G+ +H G + +VGS L+ YA+ ++ A+
Sbjct: 144 RPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGARE 203
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VFD M ++D V+W ++ GY K+ D
Sbjct: 204 VFD-------------------------------GMDERDCVLWNVMMDGYVKAGD-VAS 231
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
A+ LFR MR SG + PN T + CA G +H L +K G E + ++ L+
Sbjct: 232 AVGLFRVMRASGCD-PNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLV 290
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSI 316
Y C+ + A R++ + L N +I+G + G ++DA +F + + +S+
Sbjct: 291 SMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSV 350
Query: 317 SYNSMIKGYAVYGQVDDSKR----LFEKMPHRSIISLNTMISVI-----PEMERN----- 362
+ S++ K + H + ++ ++ + M +N
Sbjct: 351 TLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDAT 410
Query: 363 ----PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
V ++MISGYV N + E A++++ + L I + AC+ + +++ GQ
Sbjct: 411 KSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQ 470
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
LH +++K +E YV ++L+DMYS+CG ++ + FS +S+ + W ++++ ++ +G
Sbjct: 471 ELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNG 530
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
EA+ LF M+ + + N T +LSAC + G +I + + L +
Sbjct: 531 EPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAES 590
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++D+ G+ G+L A + MP E + V W +++SA
Sbjct: 591 ALIDMYGKCGNLELALRVFEHMP-EKNEVSWNSIISA 626
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 202/469 (43%), Gaps = 75/469 (15%)
Query: 157 LVG-YVQCNLMSDAFDVFIKMPKKDV---VVWTKLISGYAKSVDGCEKALKLF---RWMR 209
LVG YV DA VF +P+ + W LI G+ ++ G + LF W
Sbjct: 82 LVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGF--TMAGHHRLAVLFYVKMWAH 139
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
S P+ +T V+++CA LGA G++VH G + D +G ALI+ Y
Sbjct: 140 PSSPR-PDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLL 198
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL------------------- 310
DGA V+D ++ N +++G + G + A +F +
Sbjct: 199 DGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVC 258
Query: 311 -TEANSIS-------------------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
EA+ +S N+++ YA ++++ RLF MP +
Sbjct: 259 AAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDL---- 314
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
VTWN MISG VQN L + AL+L+ M+K + T + L A +
Sbjct: 315 -------------VTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTE 361
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L +QG+ +H ++V+ +V++ ++LVD+Y +C + AQ F + S +V + +
Sbjct: 362 LNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTM 421
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
++GY + + AV +F +L I PNA L AC M+I + + Y +
Sbjct: 422 ISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMA----AMRIGQELHGYVL 477
Query: 531 VPTLEHY----TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
E + ++D+ + G L + M + D V W +++S+
Sbjct: 478 KNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAK-DEVTWNSMISS 525
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 3/215 (1%)
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTM--RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ WN +I G+ H A+ Y+ M + T + +C+ LG+L G+L+H
Sbjct: 111 LPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVH 170
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
+ ++YVG++L+ MY+ G ++ A+ F + + W +M+GY G +
Sbjct: 171 RTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVA 230
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
AV LF +M PN AT LS C + G+++ YG+ P + +V
Sbjct: 231 SAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLV 290
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+ + L EA MP + D V W ++S C
Sbjct: 291 SMYAKCQCLEEAWRLFGLMPRD-DLVTWNGMISGC 324
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L A +F+ MP + VSWN+++ Y ES+ L+ M K + TF
Sbjct: 597 GKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFL 656
Query: 89 TILSVCAQLNSLIDGKQI 106
++S CA + +G ++
Sbjct: 657 ALISACAHAGQVQEGLRL 674
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 11/180 (6%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG-----TSLVDMYSRCGSINDAQASFSS 458
L C L G +HA V + G T LV MY DA A FSS
Sbjct: 42 LLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAVFSS 101
Query: 459 ISSPNVA---AWTALMNGYSHHGLGSEAVLLFEIMLEQ--DIVPNAATFVGVLSACVRAG 513
+ A W L+ G++ G AVL + M P+ T V+ +C G
Sbjct: 102 LPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALG 161
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
++ G + R+ ++ G+ + + ++ + +G L A E M E D V+W ++
Sbjct: 162 ALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMD-ERDCVLWNVMM 220
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 200/668 (29%), Positives = 338/668 (50%), Gaps = 61/668 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A +FDQ+ I + WN ++ +K F S+ L M S V+++ TFS +
Sbjct: 143 GDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ L S+ G+Q+H +LKSG+ VG+ L+ FY ++ A++VFDE
Sbjct: 203 KSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDE------- 255
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
M ++DV+ W +I+GY S EK L +F M S
Sbjct: 256 ------------------------MTERDVISWNSIINGYV-SNGLAEKGLSVFVQMLFS 290
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G + + T SV CA G+ VH +K F ++ L++ Y C D
Sbjct: 291 GIEI-DLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-------------NSISY 318
A V+ + + + S+I G G +A +F + E N +
Sbjct: 350 AKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 409
Query: 319 NSMI-KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTWNSM 369
N ++ +G V+ + ++ F+ +++ + + E E ++ ++WN++
Sbjct: 410 NRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTV 469
Query: 370 ISGYVQNNLHEKALQLY---MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
I GY +N +AL L+ + ++ + D T + + AC+ L + +G+ +H ++++
Sbjct: 470 IGGYSKNCYANEALSLFNLLLVEKRFSPDER--TVACVLPACASLSAFDKGREIHGYIMR 527
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ S+ +V SLVDMY++CG++ A+ F I+S ++ +WT ++ GY HG G EA+ L
Sbjct: 528 NGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIAL 587
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLG 545
F M + I P+ +FV +L AC +GLV+EG + F M+ + PT+EHY C+VD+L
Sbjct: 588 FNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G+L +A FI++MPI DA +WGALL C ++++ ER A+K+F L+ + YV+
Sbjct: 648 RTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVL 707
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
++NIYA KW + +RKR+ ++K+PGCSWIE+ RV+ F D +NP I A
Sbjct: 708 MANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAF 767
Query: 666 LEHLTANL 673
L + A +
Sbjct: 768 LRGVRARM 775
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/569 (24%), Positives = 254/569 (44%), Gaps = 93/569 (16%)
Query: 47 RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
R+V NT L + + ++ L+ + ++ + T ++L +CA SL DGK++
Sbjct: 59 RSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEV 116
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
+ +G+ +GS L Y NC +++EA RVFD+
Sbjct: 117 DNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQ---------------------- 154
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
+K+ K + W L++ AKS D ++ LF+ M SG M + YTF V +
Sbjct: 155 -------VKIEK--ALFWNILMNELAKSGD-FSGSIGLFKKMMSSGVEM-DSYTFSCVSK 203
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
+ + L + G+ +HG ++K GF S+G +L+ FY D A +V+D + + +
Sbjct: 204 SFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVIS 263
Query: 287 SNSLINGLISMGRIEDAELIFNRL-------------------TEANSISY--------- 318
NS+ING +S G E +F ++ ++ IS
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGV 323
Query: 319 -----------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
N+++ Y+ G +D +K +F +M RS++S +
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVS-----------------YT 366
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
SMI+GY + L +A++L+ M + I T + + + C+ L +G+ +H + +
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKEN 426
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+++V +L+DMY++CGS+ +A+ FS + ++ +W ++ GYS + +EA+ LF
Sbjct: 427 DMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLF 486
Query: 488 EIML-EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
++L E+ P+ T VL AC ++G +I + G +VD+ +
Sbjct: 487 NLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 546
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G L A D+ + D V W +++
Sbjct: 547 CGALLLARLLFDDITSK-DLVSWTVMIAG 574
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 206/473 (43%), Gaps = 58/473 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+N ++ +AR +FD+M R V+SWN+++ GY ++ LS+ M S ++++ T +
Sbjct: 242 KNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVS 301
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+ + CA + G+ +HC +K+ + + + LL Y+ C +++ AK VF E+ +
Sbjct: 302 VFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRS 361
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ ++ M+ GY + L + A+KLF M
Sbjct: 362 VVSYTSMIAGYAREGLAGE--------------------------------AVKLFEEME 389
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E G + P+ YT +V+ CAR EGK VH + + FD + AL++ Y C +
Sbjct: 390 EEGIS-PDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSM 448
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI------------- 316
A V+ + + + N++I G +A +FN L
Sbjct: 449 REAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPA 508
Query: 317 --SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI--------PEMERNPVTW 366
S ++ KG ++G + + ++ S++ + + ++ V+W
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSW 568
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLV 425
MI+GY + ++A+ L+ MR+ I+ +F L +ACS G + +G + +
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
+ E V +VDM +R G+++ A ++ P+ W AL+ G H
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIH 681
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 125/256 (48%), Gaps = 16/256 (6%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH- 76
I +N + + G + A +F +M ++ ++SWNT++ GYSK +E+LSL + +
Sbjct: 432 IFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLV 491
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+E T + +L CA L++ G++IH ++++GY V + L+ YA C +
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 551
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK----KDVVVWTKLISGYA 192
A+ +FD++ + + W++M+ GY +A +F +M + D + + L+ YA
Sbjct: 552 LARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLL--YA 609
Query: 193 KSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFE 250
S G ++ + F MR + P + ++ AR G + + + + I
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPP--- 666
Query: 251 FDESIGGALIEFYCGC 266
D +I GAL+ CGC
Sbjct: 667 -DATIWGALL---CGC 678
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 98/231 (42%), Gaps = 3/231 (1%)
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
S+ +++ I +R+ N+ + + ++ + A++L K ID R+ SVL
Sbjct: 43 SLRTVSDRADSITTFDRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDID-PRTLCSVL 101
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
C+ SL+ G+ + + F + +G+ L MY+ CG + +A F +
Sbjct: 102 -QLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKA 160
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
W LMN + G S ++ LF+ M+ + ++ TF V + VN G ++
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGY 220
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G +V ++ + A + +M E D + W ++++
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMT-ERDVISWNSIING 270
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 207/651 (31%), Positives = 338/651 (51%), Gaps = 53/651 (8%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L AR +FD M + VV+WN+M+ GY + E++ + M ++ T +
Sbjct: 1323 GKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVA 1382
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+ LS A L++LI+GKQ H + + + + +GS ++ FY+
Sbjct: 1383 SFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYS------------------ 1424
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ L+ DA VF +M +KDVV W LIS Y + KAL + M
Sbjct: 1425 -------------KVGLIEDAELVFSRMLEKDVVTWNLLISSYVQH-HQVGKALNMCHLM 1470
Query: 209 RESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
R EN+ + T S++ A A GK H I+ E D + ++I+ Y CE
Sbjct: 1471 RS--ENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCE 1528
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK 323
D A +V+D L N+L+ +G +A +F ++ N IS+NS+I
Sbjct: 1529 RIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVIL 1588
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
G+ GQV+++K +F +M SL + N +TW ++ISG Q+ +A+
Sbjct: 1589 GFLRNGQVNEAKDMFSQMQ-----SLG--------FQPNLITWTTLISGLAQSGFGYEAI 1635
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+ M++ I + ++ + + AC+ + SL G+ +H + + F +V V TSLVDMY
Sbjct: 1636 LFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMY 1695
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++CGSI++A+ F +SS + + A+++ Y+ HG EA+ LF+ + ++ I P++ TF
Sbjct: 1696 AKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFT 1755
Query: 504 GVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+LSAC AGLVNEG+ +F M S + + P +EHY CVV LL R G+L EA I MP
Sbjct: 1756 SILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPF 1815
Query: 563 ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
+ DA + G+LL+AC +E+GE ++ +F L+ YV LSN YA G+W + ++
Sbjct: 1816 QPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNM 1875
Query: 623 RKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
R + ++K+PGCSWI+ +++ F D ++P IYA L L + +
Sbjct: 1876 RDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEM 1926
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 248/524 (47%), Gaps = 57/524 (10%)
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG--YECF 118
K ES+ L+S M + ++ + +L C +L G+QIH +LK+G +
Sbjct: 1151 KDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKN 1210
Query: 119 EFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK 178
E+V + L+ FYA C E A R+F L N W+ +VG +QC +
Sbjct: 1211 EYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWA-AIVG-LQCRM------------- 1255
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
G++ E AL F M+E+G P+ + +V++AC L GK
Sbjct: 1256 -----------GFS------EDALLGFIEMQENGV-FPDNFVLPNVLKACGSLQLIGLGK 1297
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
VHG ++K GF + +L++ Y C + A +V+D + + NS+I G + G
Sbjct: 1298 GVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNG 1357
Query: 299 RIEDAELIF----------NRLTEANSIS----YNSMIKGYAVYGQVDDSKRLFEKMPHR 344
++A +F R+T A+ +S +++I+G + + + +
Sbjct: 1358 LNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGS 1417
Query: 345 SIISLNTMISVIPE--------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
SII+ + + +I + +E++ VTWN +IS YVQ++ KAL + MR +
Sbjct: 1418 SIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRF 1477
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
T S + A + +++ G+ H + ++ ES+V V S++DMY++C I+DA+ F
Sbjct: 1478 DSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVF 1537
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
S + ++ W L+ Y+ GL EA+ LF M + PN ++ V+ +R G VN
Sbjct: 1538 DSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVN 1597
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
E +F M+S G P L +T ++ L +SG +EA F + M
Sbjct: 1598 EAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKM 1641
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 178/400 (44%), Gaps = 67/400 (16%)
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCG--FEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
+ +++ C A G+ +H ++K G F +E + L+ FY C+ + A+R++ R
Sbjct: 1177 YGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHR 1236
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYN------------------- 319
L + + +++ MG EDA L F + E N
Sbjct: 1237 LRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLG 1296
Query: 320 --------------------SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
S++ Y G ++D++++F+ M +
Sbjct: 1297 KGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSM-----------------V 1339
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
E+N VTWNSMI GYVQN L+++A+ ++ MR I+ TR T + A + L +L +G+
Sbjct: 1340 EKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQ 1399
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
HA + + + +G+S+++ YS+ G I DA+ FS + +V W L++ Y H
Sbjct: 1400 GHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQ 1459
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
+A+ + +M +++ ++ T +LSA V +K+ + Y + LE
Sbjct: 1460 VGKALNMCHLMRSENLRFDSVTLSSILSASA----VTSNIKLGKEGHCYCIRRNLESDVV 1515
Query: 540 V----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
V +D+ + + +A + + D E D V+W LL+A
Sbjct: 1516 VANSIIDMYAKCERIDDARK-VFDSTTERDLVLWNTLLAA 1554
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 136/322 (42%), Gaps = 42/322 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPI----RTVVSWNTMLCGYSKWAKFDESLSLVS 73
++S N I RNGQ+ A+++F QM +++W T++ G ++ E++
Sbjct: 1580 VISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQ 1639
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M + ++ + + +++L C + SL G+ IH + + + V + L+ YA C
Sbjct: 1640 KMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCG 1699
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
I+EAK+VF M K++ ++ +IS YA
Sbjct: 1700 SIDEAKKVFH-------------------------------MMSSKELPIYNAMISAYAL 1728
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFD 252
E AL LF+ +++ G P+ TF S++ AC+ G EG + ++ K
Sbjct: 1729 HGQAVE-ALALFKHLQKEGIE-PDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPI 1786
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELI---FN 308
G ++ C D A+R+ + P + SL+ IE E +
Sbjct: 1787 MEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLF 1846
Query: 309 RLTEANSISYNSMIKGYAVYGQ 330
+L +NS +Y ++ YA G+
Sbjct: 1847 KLEPSNSGNYVALSNAYAAAGR 1868
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/528 (35%), Positives = 294/528 (55%), Gaps = 34/528 (6%)
Query: 176 MPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFC 235
MP++++V WT +ISG +++ E A++ F MR GE +P ++ F S IRACA LG+
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSE-AIRTFCGMRICGE-VPTQFAFSSAIRACASLGSIE 58
Query: 236 EGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN--SLING 293
GK +H L +K G + +G L + Y C A A +V++ E PC + + ++I+G
Sbjct: 59 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE--EMPCKDEVSWTAMIDG 116
Query: 294 LISMGRIEDAELIFNRL-TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII----- 347
+G E+A L F ++ E +I + + G + K F + H S++
Sbjct: 117 YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACK--FGRSVHSSVVKLGFE 174
Query: 348 -------SLNTMISVIPEME------------RNPVTWNSMISGYVQNNLHEKALQLYMT 388
+L M S +ME RN V++ +I GYV+ EK L +++
Sbjct: 175 SDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVE 234
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
+R+ I+ TFS L AC+ +L+QG LHA ++K F+ + +V + LVDMY +CG
Sbjct: 235 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGL 294
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+ A +F I P AW +L++ + HGLG +A+ +FE M+++ + PNA TF+ +L+
Sbjct: 295 LEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTG 354
Query: 509 CVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C AGLV EG+ F SM K+YGVVP EHY+CV+DLLGR+G L EA+EFI MP E +A
Sbjct: 355 CSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAF 414
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
W + L AC + E+G+ AA+K+ L+ K A V+LSNIYA +W +R R+
Sbjct: 415 GWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMR 474
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
VKK PG SW+++ + H F ED ++P + IY L+ L + +
Sbjct: 475 DGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKA 522
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 202/464 (43%), Gaps = 66/464 (14%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
MP R +VSW M+ G S+ +KF E++ M + FS+ + CA L S+ G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
KQ+HCL LK G FVGS L Y+ C + +A +VF+E+ +E+ W+ M+ GY +
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+A F KM ++V + +++ S
Sbjct: 121 GEFEEALLAFKKMIDEEVTI---------------------------------DQHVLCS 147
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
+ AC L A G+ VH ++K GFE D +G AL + Y + A V+ +++ C
Sbjct: 148 TLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFG-IDSEC 206
Query: 284 LN--ASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRL 337
N + LI+G + +IE +F L E N +++S+IK A ++ +L
Sbjct: 207 RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQL 266
Query: 338 --------FEKMPHRSII---------SLNTMISVIPEM-ERNPVTWNSMISGYVQNNLH 379
F++ P S I L I E+ + + WNS++S + Q+ L
Sbjct: 267 HAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLG 326
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT----PFESNVYV 435
+ A++++ M + TF L CS G +++G + KT P E +
Sbjct: 327 KDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHY-- 384
Query: 436 GTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
+ ++D+ R G + +A+ + + PN W + + HG
Sbjct: 385 -SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 427
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 203/459 (44%), Gaps = 57/459 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A +F++MP + VSW M+ GYSK +F+E+L M V +++ + L
Sbjct: 90 GAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTL 149
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C L + G+ +H V+K G+E FVG+ L Y+ ++E A VF
Sbjct: 150 GACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFG-------- 201
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
I ++VV +T LI GY ++ + EK L +F +R
Sbjct: 202 ----------------------IDSECRNVVSYTCLIDGYVET-EQIEKGLSVFVELRRQ 238
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PNE+TF S+I+ACA A +G +H ++K F+ D + L++ Y C +
Sbjct: 239 GIE-PNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQ 297
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAV 327
A++ +D + +P A NSL++ G +DA IF R+ + N+I++ S++ G +
Sbjct: 298 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 357
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V++ F S++ V+P E ++ +I + ++A +
Sbjct: 358 AGLVEEGLDYF--------YSMDKTYGVVPGEEH----YSCVIDLLGRAGRLKEAKEF-- 403
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRC 446
+ ++ + + AC G + G+L LVK P S V L ++Y+
Sbjct: 404 -INRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALV--LLSNIYANE 460
Query: 447 GSINDAQASFSSISSPNV---AAWTALMNGYSHHGLGSE 482
D ++ + NV ++ + GY H G+E
Sbjct: 461 RQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAE 499
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 206/665 (30%), Positives = 348/665 (52%), Gaps = 63/665 (9%)
Query: 37 ARNLFDQMPIRTVVS-WNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFSTILSVC 94
A+ +FD M +S WN ++ GY+K + E+L L + H +K + T+ ++L C
Sbjct: 57 AKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKAC 116
Query: 95 AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
L + GK IH ++K+G VGS L+ YA C E+A +W
Sbjct: 117 GGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKA-------------IW- 162
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN 214
+F +MP+KDV W +IS Y +S ++AL+ F MR G
Sbjct: 163 -----------------LFNEMPEKDVACWNTVISCYYQS-GNFKEALEYFGLMRRFGFE 204
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
PN T + I +CARL G +H LI GF D I AL++ Y C + A+
Sbjct: 205 -PNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIE 263
Query: 275 VYDRLENPCLNASNSLINGL----ISMGRIEDAELIFNRLTEANSISYNSMI-------- 322
V++++ + A NS+I+G S+ I+ + ++N + + +S+I
Sbjct: 264 VFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSAR 323
Query: 323 --KGYAVYGQVDDSKRLFEKMPHRSIISL----------NTMISVIPEMERNPVTWNSMI 370
+G V+G ++ + + S++ L + +IP+ V+WN MI
Sbjct: 324 LLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPK--SKVVSWNVMI 381
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
SGYV +AL L+ MRK ++ TF+ + ACS L +L++G+ +H +++ +
Sbjct: 382 SGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLD 441
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+N V +L+DMY++CG++++A + F + ++ +WT+++ Y HG A+ LF M
Sbjct: 442 NNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEM 501
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGH 549
L+ ++ P+ TF+ +LSAC AGLV+EG F M + YG++P +EHY+C++DLLGR+G
Sbjct: 502 LQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGR 561
Query: 550 LHEAEEFIKDMP-IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
LHEA E ++ P I D + L SAC N+++G A+ + D S Y++LSN
Sbjct: 562 LHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSN 621
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YA KW + +R ++ L +KK+PGCSWIE+N ++ F VED ++ + +++ L +
Sbjct: 622 MYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSY 681
Query: 669 LTANL 673
L+ ++
Sbjct: 682 LSDHM 686
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 130/508 (25%), Positives = 231/508 (45%), Gaps = 54/508 (10%)
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C SL GK IH V+ G + F+ L+ Y +C + AK VFD +
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
E + +W L++GY K+ E AL+LF +
Sbjct: 69 E------------------------------ISLWNGLMAGYTKNYMYVE-ALELFEKLL 97
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P+ YT+ SV++AC L + GK++H L+K G D +G +L+ Y C AF
Sbjct: 98 HYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAF 157
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMI--- 322
+ A+ +++ + + N++I+ G ++A F + E NS++ + I
Sbjct: 158 EKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSC 217
Query: 323 -------KGYAVYGQVDDSKRLFEKMPHRSIIS-------LNTMISVIPEM-ERNPVTWN 367
+G ++ ++ +S L + +++ L I V +M ++ V WN
Sbjct: 218 ARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWN 277
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
SMISGY +QL+ M + T +T S L CS L +G+ +H + ++
Sbjct: 278 SMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRN 337
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+S+V++ +SL+D+Y +CG + A+ F I V +W +++GY G EA+ LF
Sbjct: 338 RIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLF 397
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
M + + P+A TF VL+AC + + +G +I + + ++D+ +
Sbjct: 398 SEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKC 457
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + EA K +P + D V W ++++A
Sbjct: 458 GAVDEAFSVFKCLP-KRDLVSWTSMITA 484
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 189/421 (44%), Gaps = 54/421 (12%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L A +F+QMP +TVV+WN+M+ GY + L M+ VK TT S
Sbjct: 253 GKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLS 312
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+++ VC++ L++GK +H +++ + F+ S L+ Y C ++E A+ +F + +
Sbjct: 313 SLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKS 372
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ W++M+ GYV + +A +F +M K V
Sbjct: 373 KVVSWNVMISGYVAEGKLFEALGLFSEMRKSYV--------------------------- 405
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
P+ TF SV+ AC++L A +G+ +H L+I+ + +E + GAL++ Y C A
Sbjct: 406 ------EPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGA 459
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIKG 324
D A V+ L L + S+I S G+ A +F + ++N +++ +++
Sbjct: 460 VDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSA 519
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
G VD+ F +M + + +IP +E + + LHE
Sbjct: 520 CGHAGLVDEGCYYFNQMVN--------VYGIIPRVEHYSCLIDLLGRA---GRLHEAYEI 568
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMY 443
L + I S LF AC ++ G + L+ K P +S+ Y+ S +MY
Sbjct: 569 L---QQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLS--NMY 623
Query: 444 S 444
+
Sbjct: 624 A 624
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 197/665 (29%), Positives = 349/665 (52%), Gaps = 57/665 (8%)
Query: 45 PIRT----VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSL 100
P RT V +N + + + + ++ L+ +S +L T+S++L +CA L S
Sbjct: 58 PTRTIDHQVTDYNAKILHFCQLGDLENAMELICMCKKS--ELETKTYSSVLQLCAGLKSF 115
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
DGK++H ++ + E +G L+ FYA C +++E +RVFD + + N LW+ M+ Y
Sbjct: 116 TDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEY 175
Query: 161 VQCNLMSD--------------------AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+ + AF++F K+ +DV+ W +ISGY S E+
Sbjct: 176 AKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYV-SNGLTER 234
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
L +++ M G ++ + T SV+ CA G GK VH L IK FE + L+
Sbjct: 235 GLGIYKQMMYLGIDV-DLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLL 293
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSI 316
+ Y C DGA+RV++++ + + S+I G GR + A + ++ + + +
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVV 353
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
+ S++ A G +D+ K + H I + N ME N N+++ Y +
Sbjct: 354 AITSILHACARSGSLDNGKDV-----HDYIKANN--------MESNLFVCNALMDMYAKC 400
Query: 377 NLHEKALQLYMTMRKLAI----------DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
E A ++ TM I T + + AC+ L +L++G+ +H ++++
Sbjct: 401 GSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILR 460
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ S+ +V +LVD+Y +CG + A+ F I S ++ +WT ++ GY HG G+EA+
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIAT 520
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLG 545
F M + I P+ +F+ +L AC +GL+ +G + F MK+ + + P LEHY C+VDLL
Sbjct: 521 FNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLS 580
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G+L +A EFI+ +PI DA +WGALL C + ++E+ E+ A+++F L+ + YV+
Sbjct: 581 RTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVL 640
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF-SVEDRNNPNCNVIYA 664
L+NIYA KW + +R+++ ++K+PGCSWIE+ +V+ F S + ++P+ I +
Sbjct: 641 LANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIES 700
Query: 665 TLEHL 669
L+ +
Sbjct: 701 LLKKM 705
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/502 (22%), Positives = 197/502 (39%), Gaps = 131/502 (26%)
Query: 23 KAITECGRNGQLV-TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
K + E G G+ +A LFD++ R V+SWN+M+ GY + L + M +
Sbjct: 189 KIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 248
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ T ++L CA +L GK +H L +KS +E + LL Y+ C +++ A RV
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRV 308
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAK--SV 195
F+++ E N + W+ M+ GY + A + +M K+ DVV T ++ A+ S+
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSL 368
Query: 196 DG-------------------CEKALKLF----------------------RWMRESGEN 214
D C + ++ W GE
Sbjct: 369 DNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL 428
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P+ T V+ ACA L A GK +HG +++ G+ D + AL++ Y C
Sbjct: 429 KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC-------- 480
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
G++ + R L+F+ + + +S+ MI GY ++G +++
Sbjct: 481 ------------------GVLGLAR-----LLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
F +M R I
Sbjct: 518 IATFNEM------------------------------------------------RDAGI 529
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDA 452
+ +F + +ACS G L+QG +++K F E + +VD+ SR G+++ A
Sbjct: 530 EPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 588
Query: 453 QASFSSIS-SPNVAAWTALMNG 473
++ +P+ W AL+ G
Sbjct: 589 YEFIETLPIAPDATIWGALLCG 610
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 182/434 (41%), Gaps = 100/434 (23%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A +F++M R VVSW +M+ GY++ + D ++ L+ M + VKL+ ++IL
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSIL 359
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
CA+ SL +GK +H + + E FV + L+ YA C +E A VF + + +
Sbjct: 360 HACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDII 419
Query: 152 LWSLMLV-----------------------------GY--------------------VQ 162
W+ M+ GY V+
Sbjct: 420 SWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
C ++ A +F +P KD+V WT +I+GY G E A+ F MR++G P+E +F
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNE-AIATFNEMRDAGIE-PDEVSFI 537
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEF------DESIGGALIEFYCGCEAFDGA---M 273
S++ AC+ H L++ G+ F D +I L + C +
Sbjct: 538 SILYACS-----------HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLS 586
Query: 274 RVYDRLEN----PCLNASNSLINGLISMGRIEDAELIFNRLTE---ANSISYNSMIKGYA 326
+ Y+ +E P +L+ G + IE AE + R+ E NS Y + YA
Sbjct: 587 KAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYA 646
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP-VTW-------NSMISGYVQNNL 378
+ ++ KRL EK+ + + +NP +W N +SG ++
Sbjct: 647 EAEKWEEVKRLREKIGKQG-------------LRKNPGCSWIEIKGKVNLFVSGNNSSHP 693
Query: 379 HEKALQ-LYMTMRK 391
H K ++ L MR+
Sbjct: 694 HSKNIESLLKKMRR 707
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 199/665 (29%), Positives = 328/665 (49%), Gaps = 92/665 (13%)
Query: 20 STNKAITECGRNG--QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL-SLVSTMH 76
S K T C + L A +FDQ+P + +WNT++ ++ K + L + +H
Sbjct: 64 SATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLH 123
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
S N TF ++ +++SL+ G+ IH +V+K+ + F+ + L+ FY++ +++
Sbjct: 124 ESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLD 183
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A VF ++ E + + W+ M+ G+VQ +A +F +M ++
Sbjct: 184 SAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENA--------------- 228
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
PN T V+ ACA+ G+ + + G + + +
Sbjct: 229 ------------------RPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILS 270
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
A+++ Y C + + A R++D++E E + +
Sbjct: 271 NAMLDMYVKCGSLEDARRLFDKME-------------------------------EKDIV 299
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S+ +MI GYA G D ++R+F+ MP I + WN++IS Y QN
Sbjct: 300 SWTTMIDGYAKVGDYDAARRVFDVMPREDITA-----------------WNALISSYQQN 342
Query: 377 NLHEKALQLYMTMRKLAIDRTRS----TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
++AL ++ R+L +++ T + AC+ LG++ G +H ++ K + N
Sbjct: 343 GKPKEALAIF---RELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLN 399
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
++ TSL+DMYS+CG + A F S+ +V W+A++ G + HG G A+ LF M E
Sbjct: 400 FHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQE 459
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLH 551
+ PNA TF +L AC +GLV+EG F M+ YGVVP +HY C+VD+LGR+G L
Sbjct: 460 TKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLE 519
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
EA E I+ MPI A VWGALL AC + N+E+ E A ++ D AYV+LSNIYA
Sbjct: 520 EAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYA 579
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
GKW +R+ + ++K+PGCS IE+N +H F V D ++P IY+ L+ + A
Sbjct: 580 KAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVA 639
Query: 672 NLNSV 676
+ S
Sbjct: 640 RIKST 644
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 187/441 (42%), Gaps = 71/441 (16%)
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC-----E 267
E N T +I CA K +H +++ G FD + + + C
Sbjct: 25 EQKSNPSTVPILIDKCANKKHL---KQLHAHMLRTGLFFDPP---SATKLFTACALSSPS 78
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-----ANSISY---- 318
+ D A +V+D++ P L N+LI S + L+F ++ NS ++
Sbjct: 79 SLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVI 138
Query: 319 ------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE--------MERNPV 364
+S++ G A++G V + + S+I + + + +E++ V
Sbjct: 139 KAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIV 198
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+WNSMISG+VQ E+ALQL+ M+ R T + AC+ L+ G+ ++
Sbjct: 199 SWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYI 258
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
+ + N+ + +++DMY +CGS+ DA+ F + ++ +WT +++GY+ G A
Sbjct: 259 ERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAAR 318
Query: 485 LLFEIMLEQDIV--------------------------------PNAATFVGVLSACVRA 512
+F++M +DI PN T L+AC +
Sbjct: 319 RVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQL 378
Query: 513 GLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
G ++ G I +K G+ T ++D+ + GHL +A E + D VW A+
Sbjct: 379 GAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVE-RRDVFVWSAM 437
Query: 573 LSACWFWMNMEVGERAAQKMF 593
++ + M RAA +F
Sbjct: 438 IAG----LAMHGHGRAAIDLF 454
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 168/400 (42%), Gaps = 62/400 (15%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+E IVS I + G AR +FD MP + +WN ++ Y + K E+L++
Sbjct: 294 EEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFR 353
Query: 74 TMH-RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
+ N K NE T ++ L+ CAQL ++ G IH + K G + + + L+ Y+ C
Sbjct: 354 ELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKC 413
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLI 188
+E+A VF + + +WS M+ G A D+F KM K + V +T L+
Sbjct: 414 GHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLL 473
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
+ S E L F MR +P + ++ R G C + V L+ K
Sbjct: 474 CACSHSGLVDEGRL-FFNQMRPVYGVVPGSKHYACMVDILGRAG--CLEEAVE-LIEKMP 529
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
S+ GAL+ GA R+Y G +E AE+ +
Sbjct: 530 IVPSASVWGALL----------GACRIY---------------------GNVELAEMACS 558
Query: 309 RLTEANSISYNSMI---KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP-- 363
RL E +S ++ + + YA G+ D RL + M + +E+ P
Sbjct: 559 RLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMK-------------VSGLEKEPGC 605
Query: 364 --VTWNSMISGY-VQNNLHEKALQLYMTMRKLAIDRTRST 400
+ N +I + V +N H + ++Y + ++ + R +ST
Sbjct: 606 SSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEI-VARIKST 644
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 215/682 (31%), Positives = 340/682 (49%), Gaps = 91/682 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFD---QMPIRTVVSWNTMLCGYSK----WAKFD- 66
E+ + N + R G L A +FD Q I V+SWN+++ + K W D
Sbjct: 149 ESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDL 208
Query: 67 -ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
++L+ +N + + + IL C L ++ K++H +++G FVG+ L
Sbjct: 209 FSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNAL 268
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DV 181
+ YA C +E A +VF+ + + + W+ M+ GY Q AF++F M K+ D+
Sbjct: 269 IDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDM 328
Query: 182 VVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
V WT +I+GY++ GC +AL +FR M SG ++PN T SV+ ACA LGAF +G +
Sbjct: 329 VTWTAVIAGYSQR--GCSHEALNVFRQMIFSG-SLPNCVTIISVLSACASLGAFSQGMEI 385
Query: 241 HGLLIK-CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
H +K C D GG
Sbjct: 386 HAYSLKNCLLTLDNDFGG------------------------------------------ 403
Query: 300 IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
ED +L+ YN++I Y+ ++ +F+ IP
Sbjct: 404 -EDEDLMV----------YNALIDMYSKCRSFKAARSIFDD---------------IPLE 437
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTM--RKLAIDRTRSTFSVLFHACSCLGSLQQG 417
ERN VTW MI G+ Q AL+L++ M + T S + AC+ L +++ G
Sbjct: 438 ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIG 497
Query: 418 QLLHAHLVKT-PFESNVY-VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+ +HA++++ ++S+ Y V L++MYS+CG ++ A+ F S+S + +WT++M GY
Sbjct: 498 KQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYG 557
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTL 534
HG GSEA+ +F+ M + VP+ TF+ VL AC G+V++G+ F SM + YG+ P
Sbjct: 558 MHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRA 617
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY +DLL R G L +A + +KDMP+E AVVW ALLSAC N+E+ E A K+
Sbjct: 618 EHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVE 677
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
++ + +Y ++SNIYA G+W IR + +KK PGCSW++ +F V DR
Sbjct: 678 MNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDR 737
Query: 655 NNPNCNVIYATLEHLTANLNSV 676
++P IYA LE L + ++
Sbjct: 738 SHPLSPQIYALLESLIDRIKAM 759
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 133/594 (22%), Positives = 254/594 (42%), Gaps = 94/594 (15%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+ L A S+ ++ +L + CG A + +++ V WN ++ +
Sbjct: 37 VSLPALPSEPFISPRSLGTGVVASYLACGATDY---ALLVLERVTPSPAVWWNLLIREHI 93
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
K + D ++++ M R+ +L+ T +L C +L S G H L+ +G+E F
Sbjct: 94 KQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVF 153
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHE---DNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
+ + L+ Y+ C +EEA +FDE+ + D+ + W+ ++ +V+ + A D+F KM
Sbjct: 154 ICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM- 212
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
++V K + + + + +++ AC L A +
Sbjct: 213 --TLIVHEKPTNERSDII------------------------SIVNILPACGSLKAVPQT 246
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
K VHG I+ G D +G ALI+ Y C
Sbjct: 247 KEVHGNAIRNGTFLDVFVGNALIDAYAKC------------------------------- 275
Query: 298 GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
G +E+A +FN + + +S+N+M+ GY+ G + LF+ M +I
Sbjct: 276 GLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENI----------- 324
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
+ VTW ++I+GY Q +AL ++ M T + AC+ LG+ QG
Sbjct: 325 --PLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 382
Query: 418 QLLHAHLVKTPF----------ESNVYVGTSLVDMYSRCGSINDAQASFSSIS--SPNVA 465
+HA+ +K + ++ V +L+DMYS+C S A++ F I NV
Sbjct: 383 MEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 442
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQD--IVPNAATFVGVLSACVRAGLVNEGMKIFR 523
WT ++ G++ +G ++A+ LF M+ + + PNA T +L AC + G +I
Sbjct: 443 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 502
Query: 524 SMKSYGVVPTLEHYT--CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + + ++ C++++ + G + A M + A+ W ++++
Sbjct: 503 YVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTG 555
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 321/646 (49%), Gaps = 95/646 (14%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G G + +AR +FDQMP +W M+ Y F + + + M S + + FS
Sbjct: 1163 GALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLNDLFVDVIPFYNRMRMSFRECDNIIFS 1222
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
IL C++L +++G+++HC ++K G FV +GL+ Y C ++E + VF+E+ +
Sbjct: 1223 IILKACSELREIVEGRKVHCQIVKVGGPD-SFVMTGLIDMYGKCGQVECSSAVFEEIMDK 1281
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N + W+ M+ GYVQ N + +F +M +D +V +
Sbjct: 1282 NVVSWTSMIAGYVQNNCAEEGLVLFNRM--RDALVES----------------------- 1316
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
N +T S+I A +L A +GK VHG IK E + ++ Y C
Sbjct: 1317 --------NPFTLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKC-- 1366
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
G+ DA +I++ L + +S+ MI GY
Sbjct: 1367 -----------------------------GQTRDARMIYDELPTIDLVSWTVMIVGYTQA 1397
Query: 329 GQVDDSKRLF------EKMPHRSIIS--------LNTMISVIPE--------------ME 360
Q +D RLF + +P+ +++ LN +I + + +E
Sbjct: 1398 RQPNDGLRLFADEIRSDLLPNSALLQVFFQRVRFLNALIDMYAKCHTISDAYAIFHGVLE 1457
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
++ +TWNSMISGY QN AL+L+ MR ++ T A + LG++Q G L
Sbjct: 1458 KDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSL 1517
Query: 421 HAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
HA+ VK F SN+Y+GT+L++ Y++CG A+ F S+ N+ W+A++ GY G
Sbjct: 1518 HAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQGD 1577
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYT 538
GS ++ +F ML++D+ PN F VLSAC +G+V EG + F+SM + Y VP+++HY
Sbjct: 1578 GSGSLSIFSNMLKEDLKPNEVIFTTVLSACSYSGMVEEGGRYFKSMIQDYNFVPSMKHYA 1637
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
C+VDLL RSG L EA +FIK MP++ D ++GA L C + ++GE ++M L +
Sbjct: 1638 CMVDLLARSGKLDEALDFIKKMPVQRDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHRN 1697
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
YV++SN+YA GKWG+ ++R + + K PG S +E N+
Sbjct: 1698 EACYYVLVSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVETNA 1743
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 114/253 (45%), Gaps = 27/253 (10%)
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
Y G V ++ +F++MP+ P+ W MI Y N+L +
Sbjct: 1162 YGALGDVRSARMVFDQMPN-------------PDF----YAWKVMIRWYFLNDLFVDVIP 1204
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
Y MR + FS++ ACS L + +G+ +H +VK + +V T L+DMY
Sbjct: 1205 FYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVG-GPDSFVMTGLIDMYG 1263
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+CG + + A F I NV +WT+++ GY + E ++LF M + + N T
Sbjct: 1264 KCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGS 1323
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGV--VPTLEHY--TCVVDLLGRSGHLHEAEEFIKDM 560
+++A + +++G + + Y + + L + T +D+ + G +A ++
Sbjct: 1324 IINAFTKLRALHQG----KWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMIYDEL 1379
Query: 561 PIELDAVVWGALL 573
P +D V W ++
Sbjct: 1380 PT-IDLVSWTVMI 1391
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 215/682 (31%), Positives = 340/682 (49%), Gaps = 91/682 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFD---QMPIRTVVSWNTMLCGYSK----WAKFD- 66
E+ + N + R G L A +FD Q I V+SWN+++ + K W D
Sbjct: 42 ESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDL 101
Query: 67 -ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
++L+ +N + + + IL C L ++ K++H +++G FVG+ L
Sbjct: 102 FSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNAL 161
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DV 181
+ YA C +E A +VF+ + + + W+ M+ GY Q AF++F M K+ D+
Sbjct: 162 IDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDM 221
Query: 182 VVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
V WT +I+GY++ GC +AL +FR M SG ++PN T SV+ ACA LGAF +G +
Sbjct: 222 VTWTAVIAGYSQR--GCSHEALNVFRQMIFSG-SLPNCVTIISVLSACASLGAFSQGMEI 278
Query: 241 HGLLIK-CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
H +K C D GG
Sbjct: 279 HAYSLKNCLLTLDNDFGG------------------------------------------ 296
Query: 300 IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
ED +L+ YN++I Y+ ++ +F+ IP
Sbjct: 297 -EDEDLMV----------YNALIDMYSKCRSFKAARSIFDD---------------IPLE 330
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTM--RKLAIDRTRSTFSVLFHACSCLGSLQQG 417
ERN VTW MI G+ Q AL+L++ M + T S + AC+ L +++ G
Sbjct: 331 ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIG 390
Query: 418 QLLHAHLVKT-PFESNVY-VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+ +HA++++ ++S+ Y V L++MYS+CG ++ A+ F S+S + +WT++M GY
Sbjct: 391 KQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYG 450
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTL 534
HG GSEA+ +F+ M + VP+ TF+ VL AC G+V++G+ F SM + YG+ P
Sbjct: 451 MHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRA 510
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY +DLL R G L +A + +KDMP+E AVVW ALLSAC N+E+ E A K+
Sbjct: 511 EHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVE 570
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
++ + +Y ++SNIYA G+W IR + +KK PGCSW++ +F V DR
Sbjct: 571 MNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDR 630
Query: 655 NNPNCNVIYATLEHLTANLNSV 676
++P IYA LE L + ++
Sbjct: 631 SHPLSPQIYALLESLIDRIKAM 652
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 224/520 (43%), Gaps = 91/520 (17%)
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M R+ +L+ T +L C +L S G H L+ +G+E F+ + L+ Y+ C
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 135 IEEAKRVFDELHE---DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+EEA +FDE+ + D+ + W+ ++ +V+ + A D+F KM ++V K +
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT---LIVHEKPTNER 117
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
+ + + +++ AC L A + K VHG I+ G
Sbjct: 118 SDII------------------------SIVNILPACGSLKAVPQTKEVHGNAIRNGTFL 153
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
D +G ALI+ Y C G +E+A +FN +
Sbjct: 154 DVFVGNALIDAYAKC-------------------------------GLMENAVKVFNMME 182
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
+ +S+N+M+ GY+ G + LF+ M +I + VTW ++I+
Sbjct: 183 FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENI-------------PLDMVTWTAVIA 229
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF-- 429
GY Q +AL ++ M T + AC+ LG+ QG +HA+ +K
Sbjct: 230 GYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLT 289
Query: 430 --------ESNVYVGTSLVDMYSRCGSINDAQASFSSIS--SPNVAAWTALMNGYSHHGL 479
+ ++ V +L+DMYS+C S A++ F I NV WT ++ G++ +G
Sbjct: 290 LDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD 349
Query: 480 GSEAVLLFEIMLEQD--IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
++A+ LF M+ + + PNA T +L AC + G +I + + + ++
Sbjct: 350 SNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYF 409
Query: 538 T--CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
C++++ + G + A M + A+ W ++++
Sbjct: 410 VANCLINMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTG 448
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 194/643 (30%), Positives = 326/643 (50%), Gaps = 55/643 (8%)
Query: 39 NLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLN 98
L +P T+ S+++++ +++ F L+ S +H + + + + CA L
Sbjct: 59 TLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLR 118
Query: 99 SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLV 158
+L G+Q+H SG+ V S L Y C I +A+++FD + + + ++WS M+
Sbjct: 119 ALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIA 178
Query: 159 GYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN 214
GY + L+ +A ++F +M + ++V W +++G+ + ++A+ +FR M G
Sbjct: 179 GYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNN-GFYDEAVGMFRMMLVQG-F 236
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGA 272
P+ T V+ A L G VHG +IK G D+ + A+++ Y CGC
Sbjct: 237 WPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGC------ 290
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD 332
+++ +F+ + E S N+ + G + G VD
Sbjct: 291 ---------------------------VKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVD 323
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+ +F K + +ME N VTW S+I+ QN +AL+L+ M+
Sbjct: 324 TALEVFNKFKDQ-------------KMELNVVTWTSIIASCSQNGKDLEALELFRDMQAY 370
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
++ T L AC + +L G+ +H ++ +VYVG++L+DMY++CG I A
Sbjct: 371 GVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLA 430
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ F +S+ N+ +W A+M GY+ HG E + +F +ML+ P+ TF VLSAC +
Sbjct: 431 RRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQN 490
Query: 513 GLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GL EG + + SM + +G+ P +EHY C+V LL R G L EA IK+MP E DA VWGA
Sbjct: 491 GLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGA 550
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
LLS+C N+ +GE AA+K+F L+ Y++LSNIYA G W ++ IR+ + +
Sbjct: 551 LLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGL 610
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+K+PG SWIE+ +VH D+++P I L+ L +
Sbjct: 611 RKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMK 653
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 133/536 (24%), Positives = 223/536 (41%), Gaps = 101/536 (18%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS 70
+T + S +C R ++ AR LFD+MP R VV W+ M+ GYS+ +E+
Sbjct: 135 FLTDSIVASSLTHMYLKCDR---ILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKE 191
Query: 71 LVSTMHRSNVKLN-----------------------------------ETTFSTILSVCA 95
L M V+ N +T S +L
Sbjct: 192 LFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVG 251
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L ++ G Q+H V+K G +FV S +L Y C ++E RVFDE+ E +
Sbjct: 252 CLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNA 311
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
L G + ++ A +VF K + +VV WT +I+ +++ E AL+LFR M+
Sbjct: 312 FLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLE-ALELFRDMQAY 370
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PN T S+I AC + A GK +H ++ G D +G ALI+ Y C
Sbjct: 371 GVE-PNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKC----- 424
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
GRI+ A F++++ N +S+N+++KGYA++G+
Sbjct: 425 --------------------------GRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKA 458
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM-R 390
++ +F M + + VT+ ++S QN L E+ + Y +M
Sbjct: 459 KETMEMFHMMLQSG-------------QKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSE 505
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+ I+ ++ L S +G L++ ++ + + PFE + V +L+ S C N
Sbjct: 506 EHGIEPKMEHYACLVTLLSRVGKLEEA---YSIIKEMPFEPDACVWGALL---SSCRVHN 559
Query: 451 D------AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
+ A + N + L N Y+ GL E + E+M + + N
Sbjct: 560 NLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPG 615
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 404 LFHACS-CL----GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF-- 456
+FHA S CL SL Q + HA +++ S+ + TSL+ Y+ S++ Q S
Sbjct: 1 MFHALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTL 60
Query: 457 -SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
S + P + ++++L++ ++ + F + ++P+A + +C +
Sbjct: 61 SSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRAL 120
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G ++ + G + + + + + + +A + MP + D VVW A+++
Sbjct: 121 DPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMP-DRDVVVWSAMIAG 179
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 212/688 (30%), Positives = 342/688 (49%), Gaps = 97/688 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS-LVSTMHRSNVKLNETTFSTI 90
G + +R FDQ+P + V +WN+M+ Y F E++ + S ++ + TF +
Sbjct: 165 GDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPV 224
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L C +L+DG++IHC K G++ FV + L+ Y+ A+ +FD+
Sbjct: 225 LKACG---TLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDD------ 275
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
MP +D+ W +ISG ++ + + AL + MR
Sbjct: 276 -------------------------MPFRDMGSWNAMISGLIQNGNAAQ-ALDVLDEMRL 309
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G M N T S++ C +LG ++H +IK G EFD + ALI Y +
Sbjct: 310 EGIKM-NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLE 368
Query: 271 GAMRVYDRLENPCLNASNSLI---------------------NG-------LISMGRI-- 300
A + + ++ + + NS+I NG L+S+ I
Sbjct: 369 DARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVA 428
Query: 301 --EDAE-------LIFNR--LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
D + I R L E I N+++ YA G +D + ++FE + + +IS
Sbjct: 429 QSRDCKNSRSVHGFIMRRGWLMEDVVIG-NAVVDMYAKLGLLDSAHKVFEIILVKDVIS- 486
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHAC 408
WN++I+GY QN L +A+++Y M + I + T+ + A
Sbjct: 487 ----------------WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAY 530
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ +G+LQQG +H ++KT +V+V T L+D+Y +CG + DA + F + + W
Sbjct: 531 AHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWN 590
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
A+++ + HG + + LF ML++ + P+ TFV +LSAC +G V EG FR M+ Y
Sbjct: 591 AIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEY 650
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P+L+HY C+VDLLGR+G+L A FIKDMP++ DA +WGALL AC N+E+G+ A
Sbjct: 651 GIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFA 710
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
+ ++F +D K + YV+LSNIYA +GKW +R +KK PG S IE+N +V
Sbjct: 711 SDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDV 770
Query: 649 FSVEDRNNPNCNVIYATLEHLTANLNSV 676
F ++++P C IY L LTA + S+
Sbjct: 771 FYTGNQSHPKCKEIYEELRVLTAKMKSL 798
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/462 (19%), Positives = 187/462 (40%), Gaps = 83/462 (17%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I + G L AR F QM I VVSWN+++ Y + + M +
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGF 413
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV-GSGLLFFYANCFEIEEAK 139
+ + T ++ S+ AQ + + +H +++ G+ + V G+ ++ YA ++ A
Sbjct: 414 QPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH 473
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+VF+ + + + W+ ++ GY Q L S+A +V
Sbjct: 474 KVFEIILVKDVISWNTLITGYAQNGLASEAIEV--------------------------- 506
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
++ M E E +PN+ T+ S++ A A +GA +G +HG +IK D + L
Sbjct: 507 -----YKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCL 561
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYN 319
I+ Y C GR+ DA +F ++ + +S+++N
Sbjct: 562 IDVYGKC-------------------------------GRLVDAMSLFYQVPQESSVTWN 590
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
++I + ++G + + +LF +M + + + VT+ S++S +
Sbjct: 591 AIISCHGIHGHAEKTLKLFGEMLDEGV-------------KPDHVTFVSLLSACSHSGFV 637
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
E+ + M++ I + + + LG ++ + + P + + + +L
Sbjct: 638 EEGKWCFRLMQEYGIKPSLKHYGCM---VDLLGRAGYLEMAYGFIKDMPLQPDASIWGAL 694
Query: 440 VDMYSRCGSI---NDAQASFSSISSPNVAAWTALMNGYSHHG 478
+ G+I A + S NV + L N Y++ G
Sbjct: 695 LGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVG 736
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 22/256 (8%)
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN-NLH 379
++ YA G V S+ F+++P + + TWNSMIS YV N + H
Sbjct: 157 LVNLYANLGDVSLSRCTFDQIPQKDV-----------------YTWNSMISAYVHNGHFH 199
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
E Y + I TF + AC G+L G+ +H K F+ NV+V SL
Sbjct: 200 EAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVAASL 256
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+ MYSR G A++ F + ++ +W A+++G +G ++A+ + + M + I N
Sbjct: 257 IHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNF 316
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
T V +L C + G ++ M I + +G+ L ++++ + G+L +A + +
Sbjct: 317 VTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQ 376
Query: 560 MPIELDAVVWGALLSA 575
M I D V W ++++A
Sbjct: 377 MFIT-DVVSWNSIIAA 391
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 160/389 (41%), Gaps = 64/389 (16%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N + + G L +A +F+ + ++ V+SWNT++ GY++ E++ + M
Sbjct: 453 VVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEE 512
Query: 78 -SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ N+ T+ +IL A + +L G +IH V+K+ FV + L+ Y C
Sbjct: 513 CKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKC---- 568
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
R+ D A +F ++P++ V W +IS + +
Sbjct: 569 --GRLVD-------------------------AMSLFYQVPQESSVTWNAIISCHG--IH 599
Query: 197 G-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
G EK LKLF M + G P+ TF S++ AC+ G EGK L+ + G +
Sbjct: 600 GHAEKTLKLFGEMLDEGVK-PDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKH 658
Query: 256 GGALIEFYCGCEAFDGAMR-VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
G +++ + A + D P + +L+ G IE + +RL E +
Sbjct: 659 YGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVD 718
Query: 315 S--ISYNSMIKG-YAVYGQ---VDDSKRL-----FEKMPHRSIISLNTMISVIPEMERNP 363
S + Y ++ YA G+ VD + L +K P S I +N + V
Sbjct: 719 SKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVF------- 771
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKL 392
Y N H K ++Y +R L
Sbjct: 772 ---------YTGNQSHPKCKEIYEELRVL 791
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 5/157 (3%)
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
LHA LV ++++ T LV++Y+ G ++ ++ +F I +V W ++++ Y H+G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197
Query: 480 GSEAV-LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
EA+ ++++L +I P+ TF VL AC G + +G +I G +
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVAA 254
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ + R G A DMP D W A++S
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISG 290
>gi|297846216|ref|XP_002890989.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336831|gb|EFH67248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 792
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 214/679 (31%), Positives = 354/679 (52%), Gaps = 66/679 (9%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++ +T+ + G L AR LF+ MP R +V+ N ML GY K + +E+ +L M +
Sbjct: 107 VIYCTSLLTKYAKAGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRLNEAWTLFREMPK 166
Query: 78 SNVK--------------------LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYEC 117
+ V +E ++S + LI + + +
Sbjct: 167 NVVSWTVMLTALCDDGRSDDAVELFDEMPERNVVSWNTLVTGLIRNGET-----EKAKQV 221
Query: 118 FEFVGS-------GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAF 170
F+ + S ++ Y +EEAK +F+ + E N + W+ M+ GY + + +A+
Sbjct: 222 FDAMPSRDAVSWNAMIKGYIENGGMEEAKLLFENMSEKNVVTWTSMVYGYCRYGDVHEAY 281
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACA 229
+F +MP+++VV WT +ISG+A + + +AL LF M++ + + PN T S+ AC
Sbjct: 282 RLFCEMPERNVVSWTAMISGFAWN-EFYREALMLFLEMKKDVDAISPNGETLISLAYACG 340
Query: 230 RLGAFCE--GKVVHGLLIKCGFE---FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
LG G+ +H +I G+E D + +L+ Y A + + E+ L
Sbjct: 341 GLGVGFRRLGEQLHAQVISNGWESVDHDGRLAKSLVHMYASFGLIASAQSLLN--ESFDL 398
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTEA-NSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+ N +I+ + G E AE +F R+ + +S+ SMI GY G V + LF+K+
Sbjct: 399 QSCNIIISAYLKNGDFERAETLFRRVESLHDKVSWTSMIDGYLDAGDVSRAFDLFQKLH- 457
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
+++ VTW MISG VQN L +A L M + + ST+SV
Sbjct: 458 ----------------DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSV 501
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTP--FESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
L + +L QG+ LH + KT ++ ++ + SLV MY++CG+I+DA FS +
Sbjct: 502 LLSSAGATSNLDQGKHLHCVIAKTTACYDPDLILQNSLVSMYAKCGAIDDAYEIFSKMVR 561
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
++ +W +++ G SHHGL +A+ LF+ ML+ + PN+ TF+GVLSAC +GL+ +G+++
Sbjct: 562 KDIVSWNSVIIGLSHHGLADKALKLFKEMLDSGMKPNSVTFLGVLSACSHSGLITKGLEL 621
Query: 522 FRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF-W 579
F++MK +Y + P +EHY ++DLLGR+G L EAEEFI +P D V+GALL C W
Sbjct: 622 FKAMKETYSIQPGVEHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNW 681
Query: 580 MNME---VGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPG 636
+ + + ERAA ++ LD +V L N+YA LG+ + ++RK + VKK PG
Sbjct: 682 RDRDAAGIAERAAMRLLELDPVNAPGHVALCNMYAGLGRHEMEKEMRKEMGIKGVKKTPG 741
Query: 637 CSWIELNSRVHAFSVEDRN 655
CSW+ +N R + F D++
Sbjct: 742 CSWVVVNGRANVFLSGDKS 760
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 411 LGSLQQGQLLHA-HLV-KTPFE---SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
L L +G L+HA HL+ K P S V TSL+ Y++ G +++A+ F + N+
Sbjct: 80 LRRLSEGGLVHARHLLDKIPQRGSISRVIYCTSLLTKYAKAGYLDEARVLFEVMPERNIV 139
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
A++ GY +EA LF +++ N ++ +L+A G ++ +++F M
Sbjct: 140 TCNAMLTGYVKCRRLNEAWTLF-----REMPKNVVSWTVMLTALCDDGRSDDAVELFDEM 194
Query: 526 KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
VV + +V L R+G +A++ MP DAV W A++
Sbjct: 195 PERNVVS----WNTLVTGLIRNGETEKAKQVFDAMPSR-DAVSWNAMIKG 239
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
L+ ++T + ++ N ++ + G + A +F +M + +VSWN+++ G S
Sbjct: 518 LHCVIAKTTACYDPDLILQNSLVSMYAKCGAIDDAYEIFSKMVRKDIVSWNSVIIGLSHH 577
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
D++L L M S +K N TF +LS C+ + G ++
Sbjct: 578 GLADKALKLFKEMLDSGMKPNSVTFLGVLSACSHSGLITKGLEL 621
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 218/676 (32%), Positives = 330/676 (48%), Gaps = 66/676 (9%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES-- 68
L + + I N I + L A+ +FD++ + V+SWN ++ GYS+ S
Sbjct: 36 LASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFV 95
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE--FVGSGLL 126
+ L M N+ N TFS I + + L+S+ G+Q H + +K CF FVGS LL
Sbjct: 96 MELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMA--CFYDVFVGSSLL 153
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
Y + EA+ VFD + E NE+ W+ M+ GY L +AF+V
Sbjct: 154 NMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEV-------------- 199
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
F MR E++ NE+ F SV+ A A GK +H L +K
Sbjct: 200 ------------------FELMRREEEDV-NEFAFTSVLSALAVPEFVDSGKQIHCLAVK 240
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
G SI AL+ Y C + D +++V++ + +++I G G A +
Sbjct: 241 TGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKL 300
Query: 307 FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFE-KMPHRSIISLN------TMISVIPEM 359
F+R+ A + G V D+ + E K H ++ L M +++
Sbjct: 301 FSRMHFAGINPSEFTLVG--VLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMY 358
Query: 360 ERNPVT-----------------WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
++ VT W SMI+GYVQN +E AL LY M+ I T +
Sbjct: 359 AKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMA 418
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ ACS L + QG+ +HA +K V +G++L MY++CG++ + F +
Sbjct: 419 SVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPER 478
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
++ +W A+++G S +G G EA+ LFE M +QD P+ TFV VLSAC GLV+ G F
Sbjct: 479 DIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYF 538
Query: 523 RSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMN 581
R M +G++P +EHY C+VD+L R+G L+EA+EFI+ I+ +W LL AC + N
Sbjct: 539 RMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRN 598
Query: 582 MEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
E+G A +K+ L + SAYV+LS IY LG+ +R + V K+PGCSWIE
Sbjct: 599 YELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIE 658
Query: 642 LNSRVHAFSVEDRNNP 657
L S VH F V D+ +P
Sbjct: 659 LKSNVHVFVVGDQMHP 674
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 145/300 (48%), Gaps = 28/300 (9%)
Query: 284 LNASNSLIN----GLISMGRIEDAELIFNRLTEANSISY--NSMIKGYAVYGQVDDSKRL 337
L++ NSL+ + GR A++I +L ++S Y NS+I YA + +K +
Sbjct: 8 LSSFNSLVQFTHQKSLQKGRALHAQII--KLASSSSCIYLANSLINFYAKCCHLPKAKLV 65
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA--LQLYMTMRKLAID 395
F+++ ++ +IS WN +I+GY Q + ++L+ MR I
Sbjct: 66 FDRIHNKDVIS-----------------WNCLINGYSQQGPTGSSFVMELFQRMRADNIL 108
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
TFS +F A S L S+ GQ HA +K +V+VG+SL++MY + G + +A+
Sbjct: 109 PNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREV 168
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F + N W +++GY+ L EA +FE+M ++ N F VLSA V
Sbjct: 169 FDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFV 228
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G +I G++ L +V + + G L ++ + + +M + +++ W A+++
Sbjct: 229 DSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQ-VFEMSNDKNSITWSAMITG 287
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/653 (29%), Positives = 326/653 (49%), Gaps = 82/653 (12%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
I+ C + L A ++F+ +P N L S+ + +++L + M + ++
Sbjct: 63 ISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDR 122
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
+F +L +++ SL++G +IH L K G++ FV +GL+ YA C I EA+ +FD
Sbjct: 123 FSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFD- 181
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
KM +DVV W+ +I GY +S AL L
Sbjct: 182 ------------------------------KMFHRDVVTWSIMIDGYCQS-GLFNDALLL 210
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F M+ P+E +V+ AC R G GK++H +++ D + AL+ Y
Sbjct: 211 FEEMKNYNVE-PDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYA 269
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG 324
C + D A+ +F ++T N ++ +M+ G
Sbjct: 270 SCGSMDLALN-------------------------------LFEKMTPKNLVASTAMVTG 298
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
Y+ GQ+++++ +F +M ++++ V W++MISGY +++ ++AL
Sbjct: 299 YSKLGQIENARSVFNQM-----------------VKKDLVCWSAMISGYAESDSPQEALN 341
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
L+ M+ L I + T + AC+ LG+L Q + +H + K F + + +L++MY+
Sbjct: 342 LFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYA 401
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+CGS+ A+ F + NV +WT +++ ++ HG A+ F M +++I PN TFVG
Sbjct: 402 KCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVG 461
Query: 505 VLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
VL AC AGLV EG KIF SM + + P HY C+VDL GR+ L EA E ++ MP+
Sbjct: 462 VLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLA 521
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
+ ++WG+L++AC +E+GE AA+++ LD A+V LSNIYA +W +R
Sbjct: 522 PNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVR 581
Query: 624 KRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
K + H + K+ GCS ELN+ +H F V DR++ + + IY L + + L V
Sbjct: 582 KLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLV 634
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 157/346 (45%), Gaps = 51/346 (14%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
MT + L+ ST +T + GQ+ AR++F+QM + +V W+ M+ GY++ E+L+L
Sbjct: 284 MTPKNLVAST-AMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNL 342
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ M +K ++ T ++++ CA L +L K IH V K+G+ + + L+ YA
Sbjct: 343 FNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAK 402
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C +E A+R+FD KMP+K+V+ WT +IS +
Sbjct: 403 CGSLERARRIFD-------------------------------KMPRKNVISWTCMISAF 431
Query: 192 AKSVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
A D AL+ F M + EN+ PN TF V+ AC+ G EG+ + +I
Sbjct: 432 AMHGDA-GSALRFFHQMED--ENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMIN---- 484
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLE-------NPCLNASNSLINGLISMGRIEDA 303
+ +I + + C + F A + + LE P + SL+ G IE
Sbjct: 485 -EHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELG 543
Query: 304 ELIFNRLTEANSISYNSMIKGYAVYGQV---DDSKRLFEKMPHRSI 346
E RL E + + + +Y + +D ++ + M H+ I
Sbjct: 544 EFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGI 589
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 210/700 (30%), Positives = 357/700 (51%), Gaps = 88/700 (12%)
Query: 27 ECGRNGQLVTARNLFDQ-MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
E G L A+ +F+ T +N+++ GY+ E++ L M S + ++
Sbjct: 75 ELGTRESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKY 134
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TF LSVCA+ +G QIH L++K Y FV + L+ FYA C E++ A++VFDE+
Sbjct: 135 TFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEM 194
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
E N + W+ M+ GY + DA D+F +M + + V+
Sbjct: 195 SERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVI---------------------- 232
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
PN T VI ACA+L G+ V+ + G E ++ + AL++ Y
Sbjct: 233 ----------PNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMK 282
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN----------RLTEANS 315
C A D A R++D L+ N++ + + G ++A + N R++ ++
Sbjct: 283 CNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSA 342
Query: 316 ISYNSMIK----GYAVYGQV-------------------------DDSKRLFEKMPHRSI 346
IS S ++ G + +G V D + R+F++M ++++
Sbjct: 343 ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 402
Query: 347 ISLNTMISVIPE--------------MERNPVTWNSMISGYVQNNLHEKALQLYMTMR-K 391
++ N++++ E E+N V+WN++IS VQ N++E+A++++ M+ +
Sbjct: 403 VTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQ 462
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
++ T + AC LG+L + ++ ++ K + +V +GT+LVDM+SRCG
Sbjct: 463 ECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPES 522
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A + F+S+++ +V+AWTA + + G A+ LF M+EQ + P+ F+G L+AC
Sbjct: 523 AMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCH 582
Query: 512 AGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
GLV +G +IF SM K +GV P HY C+VDLLGR+G L EA + IKDMP E + V+W
Sbjct: 583 GGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWN 642
Query: 571 ALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630
+LL+AC N+E+ AA+K+ L + +YV+LSN+YA G+W +R +
Sbjct: 643 SLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKG 702
Query: 631 VKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
++K PG S I++ + H F+ D ++P I A L+ L+
Sbjct: 703 LRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELS 742
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 139/341 (40%), Gaps = 72/341 (21%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M+ +T +V+ N + NG++ A F+ MP + +VSWNT++ + ++E++ +
Sbjct: 397 MSNKT-VVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEV 455
Query: 72 VSTMHRSN-VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
M V ++ T +I S C L +L K I+ + K+ + +G+ L+ ++
Sbjct: 456 FHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFS 515
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
C + E A +F+ L +DV WT I
Sbjct: 516 RCGDPESAMSIFNSL-------------------------------TNRDVSAWTAAIGA 544
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
A + + E+A++LF M E G P+ F + AC G +GK + F
Sbjct: 545 MAMAGN-VERAIELFNEMIEQGLK-PDGVVFIGALTACCHGGLVQQGKEI--------FN 594
Query: 251 FDESIGGALIE-FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFN 308
E + G E + GC +++ L G +E+A +LI +
Sbjct: 595 SMEKLHGVSPEDVHYGC-----------------------MVDLLGRAGLLEEALQLIKD 631
Query: 309 RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM----PHRS 345
TE N + +NS++ V G V+ + EK+ P R+
Sbjct: 632 MPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERT 672
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 207/707 (29%), Positives = 353/707 (49%), Gaps = 101/707 (14%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQM-PIRTVVSWNTML-CGYSKWAKFDESLSLVSTMH 76
V+ N I+ + GQ A ++F M R ++SW+ M+ C + F L+ V M
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVD-MI 160
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLL-FFYANCFE 134
+ NE F+ C+ + G I V+K+GY + VG GL+ F +
Sbjct: 161 ENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGD 220
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+ A +VF+++ E N + W+LM+ +Q +A D+F+ M + SGY
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDM----------IFSGYE-- 268
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
P+ +T VI ACA + G+ +H I+ G D
Sbjct: 269 ---------------------PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRC 307
Query: 255 IGGALIEFYCGCEAFDGAM----RVYDRLENPCLNASNSLINGLISMGRIEDAEL----- 305
+G LI Y C + DG+M +++D++ + + + ++I G + G ++ L
Sbjct: 308 VGCCLINMYAKC-SVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRG 366
Query: 306 ------IFNRLTEANSIS-----------------------------YNSMIKGYAVYGQ 330
I N T ++++ NS+I YA G+
Sbjct: 367 MILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGR 426
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+DD+++ F+ + E+N +++N++I Y +N E+AL+L+ +
Sbjct: 427 IDDARKAFDIL-----------------FEKNLISYNTVIDAYAKNLNSEEALELFNEIE 469
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+ + TF+ L + +G++ +G+ +HA ++K+ + N V +L+ MYSRCG+I
Sbjct: 470 DQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIE 529
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A F + NV +WT+++ G++ HG ++A+ LF MLE+ + PN T++ VLSAC
Sbjct: 530 SAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACS 589
Query: 511 RAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
GLVNEG K F+SM + +GV+P +EHY C+VD+LGRSG L EA +FI MP + DA+VW
Sbjct: 590 HVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVW 649
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
L AC N+E+G+ AA+ + + +AY++LSN+YA + KW + +IRK +
Sbjct: 650 RTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEK 709
Query: 630 EVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ K+ GCSW+E+ ++VH F V D ++P IY L++L+ + +
Sbjct: 710 XLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKL 756
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/541 (23%), Positives = 236/541 (43%), Gaps = 61/541 (11%)
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
+ +++S + M + T+S L C + S G +H + +S +
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ L+ Y+ C + E+A +F LM + +D++
Sbjct: 105 NSLISLYSKCGQWEKATSIF---------------------RLMGSS---------RDLI 134
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W+ ++S +A + G +AL F M E+G PNEY F + RAC+ G + G
Sbjct: 135 SWSAMVSCFANNNMGF-RALLTFVDMIENGY-YPNEYCFAAATRACSTAEFVSVGDSIFG 192
Query: 243 LLIKCGF-EFDESIGGALIE-FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
+IK G+ + D +G LI+ F G A +V++++ +I L+ G
Sbjct: 193 FVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYA 252
Query: 301 EDA-----ELIF-----NRLTEANSISYNS----MIKGYAVYGQVDDSKRLFEKMPHRSI 346
+A ++IF +R T + IS + ++ G ++ Q ++ +
Sbjct: 253 GEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCL 312
Query: 347 ISLNTMISVIPEM-----------ERNPVTWNSMISGYVQNNLH-EKALQLYMTMRKLAI 394
I++ SV M + N +W +MI+GYVQ + E+AL L+ M +
Sbjct: 313 INMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHV 372
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
TFS AC+ L +L+ G+ + H VK F S V SL+ MY+R G I+DA+
Sbjct: 373 IPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARK 432
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
+F + N+ ++ +++ Y+ + EA+ LF + +Q + +A TF +LS G
Sbjct: 433 AFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT 492
Query: 515 VNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+ +G +I + G+ ++ + R G++ A + +DM + + + W ++++
Sbjct: 493 IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIIT 551
Query: 575 A 575
Sbjct: 552 G 552
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 8/217 (3%)
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
NP+T +I LH KA+ M T+S+ C S G L+H
Sbjct: 32 NPLT-GRLIQEINNGRLH-KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVH 89
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGYSHHGLG 480
L ++ + + SL+ +YS+CG A + F + SS ++ +W+A+++ ++++ +G
Sbjct: 90 EKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMG 149
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC- 539
A+L F M+E PN F AC A V+ G IF + G + + C
Sbjct: 150 FRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCG 209
Query: 540 VVDLL--GRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
++D+ GR G L A + + MP E +AV W +++
Sbjct: 210 LIDMFVKGR-GDLVSAFKVFEKMP-ERNAVTWTLMIT 244
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 214/690 (31%), Positives = 343/690 (49%), Gaps = 71/690 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I +N+ + + G L A LFD+MP R VSWNTM+ GY+ K +++ L + M R
Sbjct: 35 IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKR 94
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S ++ +FS +L A + G+Q+H LV+K GYEC +VGS L+ YA C +E
Sbjct: 95 SGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE- 153
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
DAF+ F ++ + + V W LI+G+ + D
Sbjct: 154 ------------------------------DAFEAFKEISEPNSVSWNALIAGFVQVRD- 182
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIG 256
+ A L M + TF ++ FC K VH ++K G + + +I
Sbjct: 183 IKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDD-PMFCNLLKQVHAKVLKLGLQHEITIC 241
Query: 257 GALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRL----T 311
A+I Y C + A RV+D L + L + NS+I G E A +F ++
Sbjct: 242 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 301
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII---------SLNTMISVIPEM--- 359
E + +Y ++ + + ++F K H +I + N +IS+ +
Sbjct: 302 ETDIYTYTGLLSACS-----GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTG 356
Query: 360 -------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
++ ++WNS+I+G+ Q L E A++ + +R I FS L
Sbjct: 357 TMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLR 416
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN-VA 465
+CS L +LQ GQ +HA K+ F SN +V +SL+ MYS+CG I A+ F ISS +
Sbjct: 417 SCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTV 476
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
AW A++ GY+ HGLG ++ LF M Q++ + TF +L+AC GL+ EG+++ M
Sbjct: 477 AWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLM 536
Query: 526 KS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
+ Y + P +EHY VDLLGR+G +++A+E I+ MP+ D +V L C +E+
Sbjct: 537 EPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEM 596
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
+ A + ++ + YV LS++Y+ L KW +K ++K + VKK PG SWIE+ +
Sbjct: 597 ATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRN 656
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+V AF+ EDR+NP C IY ++ LT +
Sbjct: 657 QVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/511 (22%), Positives = 217/511 (42%), Gaps = 95/511 (18%)
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
HC +K G +V + +L Y + A +FDE+ + + + W+ M+ GY C +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
DA+ C LF M+ SG ++ + Y+F +++
Sbjct: 83 EDAW---------------------------C-----LFTCMKRSGSDV-DGYSFSRLLK 109
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
A + F G+ VHGL+IK G+E + +G +L++ Y CE + A + + P +
Sbjct: 110 GIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVS 169
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISY---------------------------- 318
N+LI G + + I+ A + + +++
Sbjct: 170 WNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKV 229
Query: 319 ------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
N+MI YA G V D+KR+F+ + ++ ++W
Sbjct: 230 LKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG----------------SKDLISW 273
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ--GQLLHAHL 424
NSMI+G+ ++ L E A +L++ M++ ++ T++ L ACS G Q G+ LH +
Sbjct: 274 NSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS--GEEHQIFGKSLHGMV 331
Query: 425 VKTPFESNVYVGTSLVDMYSR--CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+K E +L+ MY + G++ DA + F S+ S ++ +W +++ G++ GL +
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 391
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
AV F + +I + F +L +C + G +I G V + ++
Sbjct: 392 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIV 451
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ + G + A + + + + V W A++
Sbjct: 452 MYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 199/465 (42%), Gaps = 74/465 (15%)
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
F + + H IKCG D + +++ Y A ++D + + N++I+G
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 294 LISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKR---LFEKMPHRSI 346
S G++EDA +F + ++ + S++ ++KG A + D ++ L K +
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN 135
Query: 347 ISL-NTMISVIPEMER--------------NPVTWNSMISGYVQNNLHEKALQLYMTMR- 390
+ + ++++ + + ER N V+WN++I+G+VQ + A L M
Sbjct: 136 VYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEM 195
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
K A+ TF+ L + +HA ++K + + + +++ Y+ CGS++
Sbjct: 196 KAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVS 255
Query: 451 DAQASFSSI-SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
DA+ F + S ++ +W +++ G+S H L A LF M + + T+ G+LSAC
Sbjct: 256 DAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSAC 315
Query: 510 ----------------VRAGL---------------------VNEGMKIFRSMKSYGVVP 532
++ GL + + + +F S+KS ++
Sbjct: 316 SGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLIS 375
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEF---IKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ ++ + G +A +F ++ I++D + ALL +C +++G
Sbjct: 376 ----WNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG---- 427
Query: 590 QKMFGLDKKP--ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
Q++ L K +S ++S++ + K G RK + K
Sbjct: 428 QQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSK 472
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 295/523 (56%), Gaps = 28/523 (5%)
Query: 178 KKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
K ++V W+ +I G+A+ +G +K AL+L M+ +G PN T SV+ ACARL
Sbjct: 8 KPNLVSWSAVIGGFAQ--NGYDKEALELLCRMQAAGFE-PNARTLASVLPACARLQNLNL 64
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
GK +HG + + GF + + L++ Y C A++++ + + N++I G
Sbjct: 65 GKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCE 124
Query: 297 MGRIEDAELIFNR--LTEANSISYNSMIKGYA----VYGQVDDSKRLFEKMPHRSIISLN 350
G +E A+ +F++ L ++IS+NSMI GYA + ++ F+ + R + N
Sbjct: 125 NGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATWN 184
Query: 351 TMIS-------------VIPEM-----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+IS +I +M E N TWN +ISG+V+N +E AL+L+ M+
Sbjct: 185 VLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTS 244
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
++ T ++ AC+ L ++ +G+ +HAH ++ +E +V++G +LVDMY++CGSI A
Sbjct: 245 SLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHA 304
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
++ IS+PN+ + A++ Y+ HG G E + LF ML P+ TF+ VLS+CV A
Sbjct: 305 MQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHA 364
Query: 513 GLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
G V G + F M Y V P+L+HYTC+VDLL R+G L EA E +K +P + D+V+WGAL
Sbjct: 365 GAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGAL 424
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
L C W N+E+GE AA+ + L+ YV+L+N+YA G+W R+ + +
Sbjct: 425 LGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMH 484
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
K PGCSWIE +H F D+++ IY TL++L ++ +
Sbjct: 485 KSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNLNTHMRT 527
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 207/479 (43%), Gaps = 95/479 (19%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHC 108
+VSW+ ++ G+++ E+L L+ M + + N T +++L CA+L +L GK+IH
Sbjct: 11 LVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKEIHG 70
Query: 109 LVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD 168
V + G+ FV +GL+ Y C ++ A ++F N + ++ M+VGY + +
Sbjct: 71 YVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEK 130
Query: 169 AFDVFIKMP--KKDVVVWTKLISGYAKSVDGCE--KALKL-FRWMRE----------SG- 212
A ++F +M KD + W +ISGYA ++ CE KA +L F + E SG
Sbjct: 131 AKELFDQMELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATWNVLISGY 190
Query: 213 ------ENM-------------PNEYTFDSVIR--------------------------- 226
EN+ PN YT++ +I
Sbjct: 191 ACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDI 250
Query: 227 --------ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
ACARL GK VH I+ G+E D IG AL++ Y C + AM+VY+R
Sbjct: 251 YTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNR 310
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDS 334
+ NP L + N+++ G ++ +F + + +++ S++ G V+
Sbjct: 311 ISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETG 370
Query: 335 KRLFEKMPHRSII-SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
F+ M + ++ SL ++ + R +G + + Y ++K+
Sbjct: 371 HEFFDLMTYYNVTPSLKHYTCIVDLLSR---------AGRLD--------EAYELVKKIP 413
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGSIND 451
+ L C G+++ G++ L++ P + YV L ++Y+ G +D
Sbjct: 414 RKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYV--LLANLYAYAGRWHD 470
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 130/305 (42%), Gaps = 69/305 (22%)
Query: 33 QLVTARNLFDQMPIR----TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
QL +NL +M V +WN ++ G+ + + +L L + M S+++ + T
Sbjct: 195 QLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVG 254
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
IL CA+L ++ GKQ+H ++ GYE +G+ L+ YA C I+ A +V++ +
Sbjct: 255 IILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNP 314
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N + + ML Y + G+ ++ + LFR M
Sbjct: 315 NLVSQNAMLTAYA--------------------------MHGHG------DEGIALFRNM 342
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+G P+ TF SV+ +C GA ++ G EF
Sbjct: 343 LGNGFR-PDHVTFLSVLSSCVHAGA-----------VETGHEF----------------- 373
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEANSISYNSMIKGYAV 327
FD M Y+ P L +++ L GR+++A EL+ + +S+ + +++ G +
Sbjct: 374 FD-LMTYYNV--TPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVI 430
Query: 328 YGQVD 332
+G V+
Sbjct: 431 WGNVE 435
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
S S S PN+ +W+A++ G++ +G EA+ L M PNA T VL AC R
Sbjct: 2 SCSENSKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQN 61
Query: 515 VNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
+N G +I + +G + +VD+ R + A
Sbjct: 62 LNLGKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSA 100
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 32/160 (20%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A +++++ +VS N ML Y+ DE ++L M + + + TF ++L
Sbjct: 299 GSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVL 358
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S C +H +++G+E F+ L+ +Y ++ + D L L
Sbjct: 359 SSC-----------VHAGAVETGHEFFD-----LMTYYNVTPSLKHYTCIVDLLSRAGRL 402
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKK-DVVVWTKLISG 190
+A+++ K+P+K D V+W L+ G
Sbjct: 403 ---------------DEAYELVKKIPRKPDSVMWGALLGG 427
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 213/704 (30%), Positives = 351/704 (49%), Gaps = 100/704 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST-MH 76
I + K I G + AR FDQ+ + V +WN+M+ Y++ F ++ + +
Sbjct: 75 IFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLS 134
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
S ++ + TF ++ C L+ DG+++HCLVLK G+EC ++ + + FY+
Sbjct: 135 TSFLQSDHYTFPPVIRACGNLD---DGRKVHCLVLKLGFECDVYIAASFIHFYSR----- 186
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQ--CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
G+V CNL F M +D+ W +ISG+ +
Sbjct: 187 ---------------------FGFVSLACNL-------FDNMMIRDIGTWNAMISGFYLN 218
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
E AL++F MR +M + T S++ C +L G ++H IK G EFD
Sbjct: 219 GKVAE-ALEVFDEMRFKSVSM-DSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLF 276
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI----------------NGLISMG 298
+ ALI Y A ++++++ + + NSL+ N + S+G
Sbjct: 277 VCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIG 336
Query: 299 RIED-----------AEL------------IFNRLTEANSISY-NSMIKGYAVYGQVDDS 334
+ D AEL + R + I+ N++I YA G +D +
Sbjct: 337 VVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSA 396
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA- 393
+++FE +P + +IS WNS+I+GY QN L +A+ +Y +MR +
Sbjct: 397 RKVFEGLPVKDVIS-----------------WNSLITGYSQNGLANEAIDVYSSMRYYSG 439
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+ T+ + A S LG+L+QG H L+K +++V T LVDMY +CG + DA
Sbjct: 440 AVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADAL 499
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
+ F + + +W A+++ + HG G +AV LF+ M + + P+ TFV +LSAC +G
Sbjct: 500 SLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSG 559
Query: 514 LVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
LV+EG F+ M+ +YG+ P+L+HY C+VDL GR+GHL +A F+K+MP+ D VWGAL
Sbjct: 560 LVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGAL 619
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
L AC N+E+ + + ++ + + YV+LSNIYA LG W ++R +K
Sbjct: 620 LGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLK 679
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
K PG S IE++ ++ F ++ +P C IY+ L +LTA + S+
Sbjct: 680 KTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSI 723
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/532 (23%), Positives = 229/532 (43%), Gaps = 97/532 (18%)
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
E F+ I C +++ KQ+H L++ SG F+ + L+ YA +I A+ FD
Sbjct: 43 EIDFNRIFLYCTKVHL---AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFD 99
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
++ + W+ M+ Y + A D F + L + + +S
Sbjct: 100 QIQTKDVYTWNSMISAYARIGHFHAAVDCFNEF----------LSTSFLQS--------- 140
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
+ YTF VIRAC L +G+ VH L++K GFE D I + I FY
Sbjct: 141 -------------DHYTFPPVIRACGNLD---DGRKVHCLVLKLGFECDVYIAASFIHFY 184
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT------------ 311
A ++D + + N++I+G G++ +A +F+ +
Sbjct: 185 SRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTIS 244
Query: 312 ---------------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
E + N++I YA +G++ ++ +F +M R
Sbjct: 245 SLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVR 304
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
I+S WNS+++ + QN AL +Y M + + T L
Sbjct: 305 DIVS-----------------WNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSL 347
Query: 405 FHACSCLGSLQQGQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ LG+ + +H + + F ++ +G +++DMY++ G I+ A+ F + +
Sbjct: 348 ASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKD 407
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIM-LEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
V +W +L+ GYS +GL +EA+ ++ M VPN T+V +L+A + G + +GMK
Sbjct: 408 VISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAH 467
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+ + + TC+VD+ G+ G L +A ++P + +V W A++S
Sbjct: 468 GQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQ-SSVSWNAIIS 518
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/659 (29%), Positives = 347/659 (52%), Gaps = 53/659 (8%)
Query: 47 RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
R V +N + + + + ++ LV +S +L T+S++L +CA SL DGK++
Sbjct: 64 RQVTDYNAKILHFCQLGNLENAMELVCMCQKS--ELETKTYSSVLQLCAGSKSLTDGKKV 121
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H ++ + E +G L+ YA C +++E +RVFD + + N LW+ M+ Y +
Sbjct: 122 HSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDF 181
Query: 167 SD--------------------AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ A ++F K+ +DV+ W +ISGY S E+ L++++
Sbjct: 182 KESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYV-SNGLTERGLEIYK 240
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M G ++ + T SV+ CA G GK VH L IK FE + L++ Y C
Sbjct: 241 QMMYLGIDV-DLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKC 299
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMI 322
DGA+RV++++ + + S+I G GR + A + ++ + + ++ S++
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSIL 359
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
A G +D+ K + H I + N ME N N+++ Y + + A
Sbjct: 360 HACARSGSLDNGKDV-----HDYIKANN--------MESNLFVCNALMDMYTKCGSMDGA 406
Query: 383 LQLYMTMRKLAI----------DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
++ TM I T + + AC+ L +L++G+ +H ++++ + S+
Sbjct: 407 NSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSD 466
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
+V +LVD+Y +CG + A+ F I S ++ +WT +++GY HG G+EA+ F M +
Sbjct: 467 RHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRD 526
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLH 551
I P+ +F+ +L AC +GL+ +G + F MK+ + + P LEHY C+VDLL R+G+L
Sbjct: 527 AGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLS 586
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
+A EFI+ +PI DA +WGALL C + ++E+ E+ A+++F L+ + YV+L+NIYA
Sbjct: 587 KAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYA 646
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF-SVEDRNNPNCNVIYATLEHL 669
KW + +R+++ ++K+PGCSWIE+ +V+ F S + ++P+ I + L+ +
Sbjct: 647 EAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKM 705
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/502 (22%), Positives = 198/502 (39%), Gaps = 131/502 (26%)
Query: 23 KAITECGRNGQLV-TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
K + E G G+ +A LFD++ R V+SWN+M+ GY + L + M +
Sbjct: 189 KIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGID 248
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ T ++L CA +L GK +H L +KS +E + LL Y+ C +++ A RV
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRV 308
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAK---- 193
F+++ E N + W+ M+ GY + A + +M K+ DVV T ++ A+
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSL 368
Query: 194 ---------------------------------SVDGCEKALK------LFRWMRESGEN 214
S+DG + W GE
Sbjct: 369 DNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGEL 428
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P+ T ++ ACA L A GK +HG +++ G+ D + AL++ Y C
Sbjct: 429 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC-------- 480
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
G++ + R L+F+ + + +S+ MI GY ++G +++
Sbjct: 481 ------------------GVLGLAR-----LLFDMIPSKDLVSWTVMISGYGMHGYGNEA 517
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
F +M I E + V++ S++
Sbjct: 518 IATFNEMRDAGI-------------EPDEVSFISIL------------------------ 540
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDA 452
+ACS G L+QG +++K F E + +VD+ SR G+++ A
Sbjct: 541 -----------YACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 588
Query: 453 QASFSSIS-SPNVAAWTALMNG 473
++ +P+ W AL+ G
Sbjct: 589 YEFIETLPIAPDATIWGALLCG 610
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 122/274 (44%), Gaps = 51/274 (18%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLV 72
T E I +N + + G L A +F++M R VVSW +M+ GY++ + D ++ L+
Sbjct: 281 TFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLL 340
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M + VKL+ ++IL CA+ SL +GK +H + + E FV + L+ Y C
Sbjct: 341 QQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKC 400
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLV-----------------------------GY--- 160
++ A VF + + + W+ M+ GY
Sbjct: 401 GSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILR 460
Query: 161 -----------------VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
V+C ++ A +F +P KD+V WT +ISGY G E A+
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNE-AIA 519
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
F MR++G P+E +F S++ AC+ G +G
Sbjct: 520 TFNEMRDAGIE-PDEVSFISILYACSHSGLLEQG 552
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 204/665 (30%), Positives = 338/665 (50%), Gaps = 63/665 (9%)
Query: 37 ARNLFDQMPIRTVVSW-NTMLCGYSKWAKFDESLSLVST-MHRSNVKLNETTFSTILSVC 94
A+N+FD + +S N ++ GY++ +DE+L L M +K + T+ ++L C
Sbjct: 57 AKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKAC 116
Query: 95 AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
L ++ G+ IH ++K G VGS L+ YA C E E A ++
Sbjct: 117 GGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKL------------- 163
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN 214
F +MP KDV W +IS Y +S E+AL+ F MR G
Sbjct: 164 ------------------FDEMPDKDVACWNTVISCYYQS-GKFEEALRYFGMMRRFGFE 204
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P+ T + I +CARL G+ +H L+ GF D + AL++ Y C + A+
Sbjct: 205 -PDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIE 263
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-------------------TEANS 315
V++++ N + A NS+ING G +F R+ +++
Sbjct: 264 VFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQ 323
Query: 316 ISYNSMIKGYAVYGQVD-----DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
+ + GY + ++ +S + + S T+ ++P+ V+WN MI
Sbjct: 324 LLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKT--TTVSWNVMI 381
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
SGYV AL+L+ M K ++ TF+ + ACS L +L++G+ +H +V+
Sbjct: 382 SGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLG 441
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+N V +L+DMY++CG++ +A F + ++ +WT+++ Y HG EA+ LF M
Sbjct: 442 NNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEM 501
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGH 549
L+ ++ P+ TF+ +LSAC AGLV++G+ F M YG++P +EHY+C++ LLGR+G
Sbjct: 502 LQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGR 561
Query: 550 LHEAEEFIKDMP-IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
LHEA E ++ P I D + L SAC N+++G A+ + D S Y+ILSN
Sbjct: 562 LHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSN 621
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YA GKW + +R ++ L +KK+PGCSWIE+N ++ F VED ++ + I L +
Sbjct: 622 MYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSY 681
Query: 669 LTANL 673
LT+++
Sbjct: 682 LTSHM 686
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 175/381 (45%), Gaps = 35/381 (9%)
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
++RA + +GKV+H ++ G + D + LI Y C FD A V+D +ENP
Sbjct: 9 LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68
Query: 284 -LNASNSLINGLISMGRIEDAELIFNRLT-----EANSISYNSMIKGYAVYGQVDDSKRL 337
++ N L+ G ++A +F++L + +S +Y S++K +V +
Sbjct: 69 EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRV-----V 123
Query: 338 FEKMPHRSIISLNTMISVI----------------------PEM-ERNPVTWNSMISGYV 374
+M H ++ M+ ++ EM +++ WN++IS Y
Sbjct: 124 LGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYY 183
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
Q+ E+AL+ + MR+ + T + +C+ L L +G+ +H LV + F + +
Sbjct: 184 QSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSF 243
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
V +LVDMY +CG + A F + + V AW +++NGY G G + LF+ M +
Sbjct: 244 VSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEG 303
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
+ P T L AC ++ + EG + + + P + + ++DL + G + AE
Sbjct: 304 VKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAE 363
Query: 555 EFIKDMPIELDAVVWGALLSA 575
K MP + V W ++S
Sbjct: 364 TIFKLMP-KTTTVSWNVMISG 383
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 203/430 (47%), Gaps = 54/430 (12%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ GQL A +F+QMP +TVV+WN+M+ GY + L M+ VK TT +
Sbjct: 253 GKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLT 312
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+ L C+Q L++GK +H ++++ + F+ S L+ Y C ++E A+ +F + +
Sbjct: 313 STLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKT 372
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ W++M+ GYV + DA +F +M K V
Sbjct: 373 TTVSWNVMISGYVTEGKLFDALRLFGEMSKSFV--------------------------- 405
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
P+ TF SV+ AC++L A +G+ +H L+++ +E + GAL++ Y C A
Sbjct: 406 ------EPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGA 459
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIKG 324
+ A V+ L L + S+I S GR+ +A +F + ++N +++ +++
Sbjct: 460 VEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSA 519
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
+ G VDD F +M + + +IP +E ++ +I+ + +A +
Sbjct: 520 CSHAGLVDDGLYHFNQMIN--------VYGIIPRIEH----YSCLITLLGRAGRLHEAYE 567
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMY 443
+ + +++ D S LF AC +L G + +L+ K P +S+ Y+ L +MY
Sbjct: 568 ILQSNPEISDD--FQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYI--ILSNMY 623
Query: 444 SRCGSINDAQ 453
+ G ++ +
Sbjct: 624 ASFGKWDEVR 633
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 207/693 (29%), Positives = 359/693 (51%), Gaps = 65/693 (9%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
L ++ + T++ +N IT GR G +AR +FD M R VSW ++ +++
Sbjct: 69 LASSARDRFLAHNTIL--SNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQN 126
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
++ +++ L S+M RS ++ + + C++L L G+Q+H +K +E G
Sbjct: 127 SRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIK--WES----G 180
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
S L+ + + ++ Y + + D F +F ++ KD++
Sbjct: 181 SDLI-------------------------VQNALVTMYSKSGSVGDGFALFERIRDKDLI 215
Query: 183 VWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE-GKVV 240
W +I+G A+ G E AL++FR M G + PNE+ F SV RAC+ + E G+ +
Sbjct: 216 SWGSIIAGLAQQ--GREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQI 273
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
HG+ +K + + G +L + Y C D A +V+ R+E+P L + NSLIN + G +
Sbjct: 274 HGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLL 333
Query: 301 EDAELIFNRLTEAN--------------SISYNSMIKGYAVY---------GQVDDSKRL 337
+A ++F+ + ++ + Y+++ +G +++ G V S L
Sbjct: 334 SEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSL 393
Query: 338 FEKMPHRSIISLNTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+ + ++ + V E +R+ VTWNS+++ VQ+ E +L+ + +
Sbjct: 394 LSM--YARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSL 451
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
R + + + A + LG + + +HA+ K + + L+D Y++CGS++DA F
Sbjct: 452 DRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLF 511
Query: 457 SSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
+ + +V +W++L+ GY+ G EA+ LF M + PN TFVGVL+AC R GLV
Sbjct: 512 EIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLV 571
Query: 516 NEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+EG + MK YG+VPT EH +CV+DLL R+G L EA +F+ MP E D ++W LL+
Sbjct: 572 DEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLA 631
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
A ++++G+RAA+ + +D +AYV+L NIYA G W + ++K + V+K
Sbjct: 632 ASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKS 691
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
PG SWI+L + F VEDR++P + IY LE
Sbjct: 692 PGKSWIKLKGELKVFIVEDRSHPESDEIYTMLE 724
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 175/403 (43%), Gaps = 64/403 (15%)
Query: 227 ACARLGAFCEGKVVHGLLIKCG-----FEFDESIGGALIEFYCGCEAFDGAMRVYDRL-- 279
AC+RL + +G++VH L+ + + LI Y C A D A V+D +
Sbjct: 51 ACSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLD 110
Query: 280 ENP-------CLNASNS-------LINGLISMGRIED--------------AELIFNRLT 311
NP +A NS L + ++ G + D +L R
Sbjct: 111 RNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQV 170
Query: 312 EANSISY---------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
A +I + N+++ Y+ G V D LFE++ + +IS
Sbjct: 171 HAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLIS-------------- 216
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACS-CLGSLQQGQLL 420
W S+I+G Q ALQ++ M + F +F ACS + SL+ G+ +
Sbjct: 217 ---WGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQI 273
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H VK + N Y G SL DMY+RC ++ A+ F I SP++ +W +L+N +S GL
Sbjct: 274 HGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLL 333
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
SEA++LF M + + P+ T + +L ACV +++G I + G+ + +
Sbjct: 334 SEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSL 393
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
+ + R A + + + D V W ++L+AC ++E
Sbjct: 394 LSMYARCLDFSSAMDVFHETH-DRDVVTWNSILTACVQHQHLE 435
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 197/699 (28%), Positives = 349/699 (49%), Gaps = 91/699 (13%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
+ +++L V N+ + + +AR +FD++P ++V SW ++ G ++ + + +
Sbjct: 92 LIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDY 151
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ ++ +E S + C ++S++ G+ +H V+ G+ FV + LL YA
Sbjct: 152 FVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAK 211
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
I ++ +VF+ L N++ W+ M+ G+V L ++A++ F++M +++
Sbjct: 212 LGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEI---------- 261
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
PN F SV +A +LG +G+ ++ + + G +
Sbjct: 262 -----------------------RPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQS 298
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPC-LNAS-NSLINGLISMGRIEDAELIFNR 309
+ +G ALI+ + C + V+ + C +N N++I+G G E+A L+F R
Sbjct: 299 NIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLR 358
Query: 310 LTEAN-------------------SISY-------------------NSMIKGYAVYGQV 331
+ + N S+ Y N+++ YA G++
Sbjct: 359 MCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSIGVSLCNALMDAYAKCGEL 418
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
D ++LF+ E N ++W ++++ Y Q++ E AL ++ MR+
Sbjct: 419 DAMRKLFDTWE-----------------ESNQISWTTLVTAYSQSSEWEDALSVFSQMRE 461
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+ + TFS + +C+ L SL+ GQ +H+ KT F + V + L+DMY++CGS+ D
Sbjct: 462 MGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRD 521
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A F S+ P+V +WTA+++GY+ HG+ +A+ LF M PN+ATF+ +L AC
Sbjct: 522 AIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSH 581
Query: 512 AGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
GLV+EG++ F M+ YG+VP +EHY CVVD+LGR G L EA +FI MPIE D VW
Sbjct: 582 GGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWS 641
Query: 571 ALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630
LL AC N+++ + AAQK+ + +A V+LSN Y G +++R +
Sbjct: 642 TLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNVRNMMKSQA 701
Query: 631 VKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
++K+ G SWI + ++H F D+ +P + IY TL L
Sbjct: 702 MRKETGMSWICIGGKIHKFCSGDQYHPQKDDIYKTLNVL 740
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 210/461 (45%), Gaps = 34/461 (7%)
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS---VDGC 198
F + + ++ + +++ Y +C+ A VF ++P+K V WT L+ G ++ DG
Sbjct: 90 FQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGI 149
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+ +++ + +P+EY + I+AC + + G++VH +I GF + +
Sbjct: 150 DYFVEIL-----GCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTS 204
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEAN 314
L+ Y + +V++ LEN + N++I+G +S G +A F R+ N
Sbjct: 205 LLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPN 264
Query: 315 SISYNSMIKGYAVYGQVDDSK---RLFEKMPHRSIISLNTMI-------SVIPEMERNPV 364
+ S+ K G V+ + R+ ++ +S I + T + + E V
Sbjct: 265 VACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFV 324
Query: 365 T----------WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+ WN+MISG+ + E+A+ L++ M + I R T+ ++ + + SL
Sbjct: 325 SNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSL 384
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ + LH + K+ V + +L+D Y++CG ++ + F + N +WT L+ Y
Sbjct: 385 EYVKQLHGMIWKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAY 443
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
S +A+ +F M E PN TF GVL++C + G ++ G
Sbjct: 444 SQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDK 503
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ ++D+ + G + +A + + + + D + W A++S
Sbjct: 504 CVESVLIDMYAKCGSVRDAIKVFESLK-DPDVISWTAMISG 543
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 214/687 (31%), Positives = 331/687 (48%), Gaps = 90/687 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I R L AR +F++M R VSWN+++ GY ++++L + + +
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T S++L C L ++ +G +H ++ K G +G+GLL Y + EA+RV
Sbjct: 220 PDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F KM KD V W +I GYA+ + E +
Sbjct: 280 FS-------------------------------KMAVKDSVTWNTMICGYAQ-LGRHEAS 307
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+KLF M + +P+ + S IRAC + G GK VH LI GFE D LI+
Sbjct: 308 VKLFMDMIDG--FVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILID 365
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLING---------------LISMGRIEDAEL- 305
Y C A V+D + NSLING ++ M R D+
Sbjct: 366 MYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTF 425
Query: 306 -----IFNRLT-----------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
IF++L EA I NS++ YA G++DD ++F M
Sbjct: 426 VLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSA 485
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
IIS WN++I+ V + Q+ MR + +T
Sbjct: 486 HDIIS-----------------WNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLG 528
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ CS L +QG+ +H ++ K+ FESNV +G +L++MYS+CGS+ + F + +
Sbjct: 529 ILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKD 588
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V WTAL++ + +G G +A+ F+ M ++P++ F+ + AC +G+V EG++ F
Sbjct: 589 VVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFD 648
Query: 524 SMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
MK+ Y + P +EHY CVVDLL RSG L +AEEFI MP++ DA +WGALLSAC N
Sbjct: 649 RMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNT 708
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
+ +R ++K+ L+ YV++SNIYA LGKW + +R + +KK+PG SWIE+
Sbjct: 709 NIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEI 768
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHL 669
RV+ F D++ + + LE+L
Sbjct: 769 QKRVYVFRTGDKSFEQYDKVKDLLEYL 795
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/597 (23%), Positives = 271/597 (45%), Gaps = 57/597 (9%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQM-PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
++ + K I++ + +++ ++F + P V WN+++ + F ++L + M
Sbjct: 54 VIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMR 113
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
++ + TF ++++ CA++ L G +H ++ G+E ++G+ L+ Y+ +++
Sbjct: 114 EKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLD 173
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+ VF+E M +D V W LISGY S
Sbjct: 174 NARYVFEE-------------------------------MSNRDSVSWNSLISGYC-SNG 201
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E AL ++ R +G +P+ +T SV+ AC L A EG VHG++ K G D IG
Sbjct: 202 FWEDALDMYHKFRMTGM-VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIG 260
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA--- 313
L+ Y E A RV+ ++ N++I G +GR E + +F + +
Sbjct: 261 NGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVP 320
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI----ISLNTMISVIPEME--------- 360
+ +S S I+ G + K + + + ++ N +I + +
Sbjct: 321 DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF 380
Query: 361 -----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ VTWNS+I+GY Q+ +++ L+ + M K+ TF +L S L +
Sbjct: 381 DTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADIN 439
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
QG+ +H ++K FE+ + +G SL+D+Y++CG ++D FS +S+ ++ +W ++
Sbjct: 440 QGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSV 499
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
H + + M + ++P+ AT +G+L C + +G +I + G +
Sbjct: 500 HFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVP 559
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
++++ + G L + K M E D V W AL+SA + + +A Q M
Sbjct: 560 IGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYGEGKKALKAFQDM 615
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 195/644 (30%), Positives = 336/644 (52%), Gaps = 82/644 (12%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
+G+++ AR +FD +P T+ WNTM+ GYS+ +S+ M SN+K + TF +
Sbjct: 54 SGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFL 113
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L + +L GK + +K G++ FV + ++ C ++ A++VFD
Sbjct: 114 LKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFD------- 166
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
M DA++V V W ++SGY + V +K+ LF M +
Sbjct: 167 ---------------MGDAWEV---------VTWNIMLSGYNR-VKQFKKSKMLFIEMEK 201
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G + PN T ++ AC++L GK ++ + I G ++E
Sbjct: 202 RGVS-PNSVTLVLMLSACSKLKDLEGGKHIY-----------KYINGGIVE--------- 240
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
N L N LI+ + G +++A+ +F+ + + IS+ S++ G+A GQ
Sbjct: 241 ---------RNLIL--ENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQ 289
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+D +++ F+++P ER+ V+W +MI GY++ N +AL L+ M+
Sbjct: 290 IDLARKYFDQIP-----------------ERDYVSWTAMIDGYLRMNRFIEALALFREMQ 332
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+ T + AC+ LG+L+ G+ + ++ K +++ +VG +L+DMY +CG++
Sbjct: 333 MSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVG 392
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A+ F + + WTA++ G + +G G EA+ +F M+E I P+ T++GVL AC
Sbjct: 393 KAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACT 452
Query: 511 RAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
AG+V +G F SM +G+ P + HY C+VDLLGR+G L EA E I +MP++ +++VW
Sbjct: 453 HAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVW 512
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
G+LL AC N+++ E AA+++ L+ + + YV+L NIYA +W +RK +
Sbjct: 513 GSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMER 572
Query: 630 EVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+KK PGCS +ELN V+ F D+++P IYA LE++ +L
Sbjct: 573 GIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDL 616
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 148/335 (44%), Gaps = 68/335 (20%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S +T GQ+ AR FDQ+P R VSW M+ GY + +F E+L+L M
Sbjct: 274 VISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQM 333
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
SNVK +E T +IL+ CA L +L G+ + + K+ + FVG+ L+ Y C + +
Sbjct: 334 SNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGK 393
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AK+VF E+H ++ W+ M+VG I+G+
Sbjct: 394 AKKVFKEMHHKDKFTWTAMIVGLA--------------------------INGHG----- 422
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E+AL +F M E+ P+E T+ V+ AC G +G
Sbjct: 423 -EEALAMFSNMIEASIT-PDEITYIGVLCACTHAGMVEKG-------------------- 460
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEANSI 316
++F +M + ++ P + +++ L GR+E+A E+I N + NSI
Sbjct: 461 ---------QSFFISMTMQHGIK-PNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSI 510
Query: 317 SYNSMIKGYAVYGQVD----DSKRLFEKMPHRSII 347
+ S++ V+ V +K++ E P +
Sbjct: 511 VWGSLLGACRVHKNVQLAEMAAKQILELEPENGAV 545
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 179/398 (44%), Gaps = 37/398 (9%)
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEA--FDGAMRVYDRLENPCLNASNSLINGLI 295
K +H IK G D +I F C E+ A +V+D + P L N++I G
Sbjct: 24 KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYS 83
Query: 296 SMGRIEDAELIFNRLTEAN----SISYNSMIKGYA-----VYGQV--------DDSKRLF 338
+ ++ ++ + +N ++ ++KG+ YG+V LF
Sbjct: 84 RINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLF 143
Query: 339 EKMPHRSIISLNTMISVIPEM-----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
+ + SL ++ + ++ VTWN M+SGY + +K+ L++ M K
Sbjct: 144 VQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRG 203
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+ T ++ ACS L L+ G+ ++ ++ E N+ + L+DM++ CG +++AQ
Sbjct: 204 VSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQ 263
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
+ F ++ + +V +WT+++ G+++ G A F+ + E+D V A G L R
Sbjct: 264 SVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYL----RMN 319
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE------EFIKDMPIELDAV 567
E + +FR M+ V P + +T +V +L HL E +I I+ D
Sbjct: 320 RFIEALALFREMQMSNVKP--DEFT-MVSILTACAHLGALELGEWVKTYIDKNSIKNDTF 376
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
V AL+ + N+ ++ ++M DK +A ++
Sbjct: 377 VGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIV 414
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 199/655 (30%), Positives = 330/655 (50%), Gaps = 62/655 (9%)
Query: 23 KAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL 82
+A CG V R L D P+R+ VSWN +L Y++ + + + + + S ++
Sbjct: 204 EAYVSCGEVD--VAERALLDS-PVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEI 260
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
++ T T+L C +L G+ +H LV+K G E + + L+ Y+ C E+A VF
Sbjct: 261 SKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVF 320
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
+ E + + SLM+ + + ++ +AFD+F++M V
Sbjct: 321 ARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGV--------------------- 359
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
PN+YTF + +R G + +H ++K GF + + A++
Sbjct: 360 ------------KPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGM 407
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISY 318
Y A A+ +D ++ P + + N+L++G S E IF L AN +Y
Sbjct: 408 YVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTY 467
Query: 319 NSMIK----------GYAVY---------GQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
+++ G V+ G D SK L + + N +
Sbjct: 468 VGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFT-NARLVFDRLK 526
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
ER+ +W ++S Y + + EKA++ + +M + +T + CS L L G
Sbjct: 527 ERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQ 586
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
LH++ +K+ + S+V V ++LVDMY +CG++ DA+ F + ++ W ++ GY+ HG
Sbjct: 587 LHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGH 645
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYT 538
G +A+ F+ M+++ VP+ TFVGVLSAC AGL++EG + F+ + S YG+ PTLEHY
Sbjct: 646 GYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYA 705
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
C+VD+L ++G L EAE I +MP+ DA +W +L AC N+E+ ERAA+K+F
Sbjct: 706 CMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPD 765
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
IS+ ++LSNIYA L +W +R L VKK+PGCSWIE+N ++H F +D
Sbjct: 766 DISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKLHVFLSQD 820
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 131/564 (23%), Positives = 243/564 (43%), Gaps = 57/564 (10%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G+L AR++FD MP R VV+W M+ + +L L + M V N + L
Sbjct: 109 GRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAAL 168
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C + L Q+H +K +V S L+ Y +C E++ A+R
Sbjct: 169 KACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAER----------- 217
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+ P + V W L++ YA+ D K + +F + ES
Sbjct: 218 --------------------ALLDSPVRSDVSWNALLNEYARDGD-YAKVMLVFDKLVES 256
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G+ + ++YT +V++ C LG G+ VHGL+IK G E D + LIE Y C + +
Sbjct: 257 GDEI-SKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAED 315
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY--- 328
A V+ R++ P + + +I+ +A IF ++++ G A+
Sbjct: 316 AYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASR 375
Query: 329 -GQVDDSKRLFEKMPHR----------SIISLNTMISVIP------EMERNP--VTWNSM 369
G V+ + + + +I+ + + ++ + P +WN++
Sbjct: 376 TGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTL 435
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+SG+ N E L+++ + + + T+ + C+ L L+ G +HA ++K+ F
Sbjct: 436 LSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGF 495
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ + V L+DMY + G +A+ F + +V +WT +M+ Y+ G +A+ F
Sbjct: 496 QGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRS 555
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
ML ++ PN AT LS C + G+++ G ++ + +VD+ + G+
Sbjct: 556 MLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSVVS-SALVDMYVKCGN 614
Query: 550 LHEAEEFIKDMPIELDAVVWGALL 573
L +AE + D V W ++
Sbjct: 615 LADAEMLFDESDTH-DLVEWNTII 637
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/549 (23%), Positives = 233/549 (42%), Gaps = 66/549 (12%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+++ L CA +L GK +H +L+SG F+ LL Y C + +A+ VFD
Sbjct: 62 SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFD-- 119
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
MP +DVV WT ++S + D AL+LF
Sbjct: 120 -----------------------------GMPHRDVVAWTAMVSAITAAGDA-GAALRLF 149
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M E G +PN + + ++AC VH +K FD + +L+E Y
Sbjct: 150 AEMSEEGV-VPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVS 208
Query: 266 CEAFDGAMRVYDRLENPCLN--ASNSLINGLISMGRIEDAELIFNRLTEA-NSISYNSMI 322
C D A R L++P + + N+L+N G L+F++L E+ + IS ++
Sbjct: 209 CGEVDVAERAL--LDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLP 266
Query: 323 -------------KGYAVYGQVDDSKRLFEKMPHRSII-------SLNTMISVIPEMERN 362
G AV+G V +++ + +I S V ++
Sbjct: 267 TVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEP 326
Query: 363 PVTWNS-MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
V S MIS + ++++ +A ++M M + + + TF L S G + + +H
Sbjct: 327 DVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIH 386
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
AH+VK+ F V ++V MY + G++ DA +F + P++A+W L++G+
Sbjct: 387 AHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCE 446
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
+ +F+ ++ + ++ N T+VG+L C + G ++ + G + ++
Sbjct: 447 HGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLL 506
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ---KMFGLDKK 598
D+ ++G A + D E D W ++S + + GE+A + M +K+
Sbjct: 507 DMYVQAGCFTNA-RLVFDRLKERDVFSWTVVMST---YAKTDEGEKAIECFRSMLRENKR 562
Query: 599 PISAYVILS 607
P A + S
Sbjct: 563 PNDATLATS 571
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 6/186 (3%)
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+L + RS ++ C+ +L++G+ LHA L+++ + ++ SL++MY +CG +
Sbjct: 54 RLRAEELRS-YAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLA 112
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
DA++ F + +V AWTA+++ + G A+ LF M E+ +VPN L AC
Sbjct: 113 DARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACT 172
Query: 511 RAGLVNEGMKIF-RSMKSYGVV-PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
+ ++ +++K G+ P + + +V+ G + AE + D P+ D V
Sbjct: 173 VGSDLGFTPQVHAQAVKLEGLFDPYVS--SSLVEAYVSCGEVDVAERALLDSPVRSD-VS 229
Query: 569 WGALLS 574
W ALL+
Sbjct: 230 WNALLN 235
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 210/676 (31%), Positives = 334/676 (49%), Gaps = 74/676 (10%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
NG L A+ LFD +P + V WN ML GY K ++ + M S +K N TF+
Sbjct: 105 ENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFAC 164
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LSVCA L G Q+H + + G E V + LL Y+ C ++ A+++FD L
Sbjct: 165 VLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTL---- 220
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
P+ D+V W +ISGY ++ E A LFR M
Sbjct: 221 ---------------------------PQSDLVSWNGIISGYVQNGLMGE-AEHLFRGMI 252
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+G P+ TF S + L + K +HG +I+ D + ALI+ Y C
Sbjct: 253 SAGIK-PDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDV 311
Query: 270 DGAMRVYDRLENPCLNAS------NSLINGLISMGRIEDAELIFNRLTE----ANSISYN 319
+ A + N C ++S ++I+G + G+ ++A F L + S++++
Sbjct: 312 EMAQK------NLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFS 365
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ER 361
S+ +A ++ K L + + + S I +M E+
Sbjct: 366 SIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEK 425
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACSCLGSLQQGQ 418
+ + WNSMI+ QN +A+ L+ R++ ++ TR + S AC+ L +L G+
Sbjct: 426 DAICWNSMITSCSQNGRPGEAINLF---RQMGMEGTRYDCVSISGALSACANLPALHYGK 482
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H ++K P S++Y +SL+DMY++CG++N ++ F + N +W ++++ Y +HG
Sbjct: 483 EIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHG 542
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHY 537
E + LF ML I P+ TF+G++SAC AG V+EG++ + M + YG+ +EHY
Sbjct: 543 DLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHY 602
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
CV D+ GR+G LHEA E I MP DA VWG LL AC N+E+ E A++ +F LD
Sbjct: 603 ACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDP 662
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
YV+L+N+ A GKW K + +R + V+K PG SWIE+N+ H F D ++P
Sbjct: 663 LNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHP 722
Query: 658 NCNVIYATLEHLTANL 673
IY+ L+ L L
Sbjct: 723 LTAQIYSVLDSLLLEL 738
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 145/568 (25%), Positives = 262/568 (46%), Gaps = 56/568 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G L A+NLF + + +WN M+ G++ +F+ +L M + V ++ TF
Sbjct: 4 RTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPY 63
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
++ C L S+ GK +H V G + FVGS L+ YA + +A+ +FD +
Sbjct: 64 VVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI---- 119
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
P+KD V+W +++GY K+ D A+K+F MR
Sbjct: 120 ---------------------------PQKDSVLWNVMLNGYVKNGDS-GNAIKIFLEMR 151
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
S E PN TF V+ CA G +HG+ + CG E D + L+ Y C+
Sbjct: 152 HS-EIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCL 210
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGY 325
A +++D L L + N +I+G + G + +AE +F + A +SI++ S +
Sbjct: 211 QAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCV 270
Query: 326 ----------AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN--------PVTWN 367
++G + + + ++I + + ++N V
Sbjct: 271 NELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCT 330
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+MISGYV N +++AL+ + + + + T TFS +F A + L +L G+ LH ++KT
Sbjct: 331 TMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT 390
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ +VG++++DMY++CG ++ A F+ I+ + W +++ S +G EA+ LF
Sbjct: 391 KLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLF 450
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
M + + + G LSAC ++ G +I M + L + ++D+ +
Sbjct: 451 RQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKC 510
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSA 575
G+L+ + M E + V W +++SA
Sbjct: 511 GNLNFSRRVFDRMQ-EKNEVSWNSIISA 537
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 197/456 (43%), Gaps = 59/456 (12%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
YV+ + DA ++F + W +I G+ + AL + M +G + P++Y
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTM-MGQFNYALLFYLKMLGAGVS-PDKY 59
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
TF V++AC L + GK+VH + G + D +G +LI+ Y A ++D +
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISY----------------- 318
N ++NG + G +A IF + + NS+++
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 319 ------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
N+++ Y+ + +++LF+ +P ++S
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVS------------ 227
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
WN +ISGYVQN L +A L+ M I TF+ + L SL+ + +
Sbjct: 228 -----WNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEI 282
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H ++++ +V++ ++L+D+Y +C + AQ + SS + T +++GY +G
Sbjct: 283 HGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKN 342
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
EA+ F ++++ + P + TF + A +N G ++ S+ + + +
Sbjct: 343 KEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAI 402
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+D+ + G L A + E DA+ W +++++C
Sbjct: 403 LDMYAKCGRLDLACRVFNRI-TEKDAICWNSMITSC 437
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY R GS+ DA+ F ++ +AW ++ G++ G + A+L + ML + P+ T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
F V+ AC V G + ++ G+ + + ++ L +GHL +A+ ++P
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 562 IELDAVVWGALLSA 575
+ D+V+W +L+
Sbjct: 121 -QKDSVLWNVMLNG 133
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 205/682 (30%), Positives = 339/682 (49%), Gaps = 59/682 (8%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T + +NK + E + G L AR +FD+M + +SW T++ GY E+L L
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 75 MH-RSNVKLNETTFSTILSVCAQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M S ++++ S C LNS ++ G+ +H +K+G FVGS LL Y
Sbjct: 106 MRVESGLRIDPFILSLAHKACG-LNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKN 164
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
+I E +RVF E+ N + W+ ++ G V+ +A F +M + V
Sbjct: 165 GKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEY--------- 215
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+ YTF ++ACA GA G+ +H +K GF+
Sbjct: 216 ------------------------DSYTFAIALKACADSGALNYGREIHAQAMKKGFDVS 251
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+ L Y C + + +++++ + + ++I L+ MG+ E A F R+ E
Sbjct: 252 SFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRE 311
Query: 313 A----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII-------SLNTMIS------- 354
+ N ++ ++I G A +++ ++L + H + S+ TM +
Sbjct: 312 SDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTS 371
Query: 355 ---VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
+ EM R+ V+W+++I+GY Q +A +L MR T + + AC
Sbjct: 372 SSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGN 431
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
+ L+ G+ LHA+++ E V ++L++MY +CGSI +A F + + ++ +WTA+
Sbjct: 432 MAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAM 491
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYG 529
+NGY+ HG E + LFE + + P++ TF+GVLSAC AGLV+ G + F +M K Y
Sbjct: 492 INGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQ 551
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ P+ EHY C++DLL R+G L +AE I+ MP D VVW LL AC ++E G R A
Sbjct: 552 ISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTA 611
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+++ L+ ++ L+NIYA GKW + DIRK + V K+PG SWI++ V AF
Sbjct: 612 ERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAF 671
Query: 650 SVEDRNNPNCNVIYATLEHLTA 671
DR++P IY L+ L +
Sbjct: 672 VAGDRSHPQGEDIYNMLDLLAS 693
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 228/713 (31%), Positives = 346/713 (48%), Gaps = 81/713 (11%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR LFD+MP R V WN ML Y + + DE+L S HRS + FS +
Sbjct: 766 GLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPD---FSNLH 822
Query: 92 SVCAQLNSLID------GKQIHCLVLK-----SGYECF-------EFVGSGLLFFYANCF 133
V +NS + +Q+ +K G F EF+ +G + +CF
Sbjct: 823 CVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCF 882
Query: 134 E----------------IEEAKRVFDELHEDNELLWSLMLVG---------------YVQ 162
+ I A D+L + E + +L++ Y +
Sbjct: 883 KTLLRSTIGHDSVTLVIILSAAVGADDL-DLGEQIHALVIKSSFAPVVPVSNSLMNMYSK 941
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
++ A FI P+ D++ W +IS YA++ E A+ FR + G P+++T
Sbjct: 942 AGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEME-AICTFRDLLRDGLK-PDQFTLA 999
Query: 223 SVIRACARLGA---FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
SV+RAC+ F G VH IKCG D + ALI+ Y D A +
Sbjct: 1000 SVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGK 1059
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSK 335
+ L + N+++ G I + A F+ + E + I+ + IK + K
Sbjct: 1060 YDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGK 1119
Query: 336 RLFE---KMPHRSII--------------SLNTMISVIPEMER-NPVTWNSMISGYVQNN 377
++ K+ + + + + + E+ R + V W +MISGY++N
Sbjct: 1120 QIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENG 1179
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+ AL +Y MR + TF+ L A SCL +L+QG+ +HA++VK + + +VGT
Sbjct: 1180 DEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGT 1239
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SLVDMY +CGS+ DA F + V W A++ G + HG EA+ LF M I P
Sbjct: 1240 SLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQP 1299
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
+ TF+GVLSAC +GL +E K F +M K+YG+ P +EHY+C+VD LGR+G + EAE
Sbjct: 1300 DKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENV 1359
Query: 557 IKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
I MP + A ++ ALL AC + E +R A K+ LD SAYV+LSNIYA +W
Sbjct: 1360 IASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQW 1419
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
D R + VKKDPG SWI++ ++VH F V+DR++P ++IY +E L
Sbjct: 1420 DDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDL 1472
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 192/457 (42%), Gaps = 76/457 (16%)
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK----ALKLFRWMRES 211
++ Y +C + A VF K +D+V W +++ YA+ D + +LF +RE
Sbjct: 652 LITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREF 711
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G ++ T +++ C G + VHG +K GFE D + GAL+ YC
Sbjct: 712 GFSI-TRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYC------- 763
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
G + A L+F+++ E +++ +N M+K Y
Sbjct: 764 ------------------------KYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQ 799
Query: 332 DDSKRLFEKMPHRS------------IISLNTMIS----------------VIP-EMERN 362
D++ R F HRS I +N+ +S + P + N
Sbjct: 800 DEALRFFSAF-HRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSN 858
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
WN ++ ++ A+ + T+ + I T ++ A L G+ +HA
Sbjct: 859 IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHA 918
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP--NVAAWTALMNGYSHHGLG 480
++K+ F V V SL++MYS+ G + A+ +F I+SP ++ +W +++ Y+ + L
Sbjct: 919 LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF--INSPELDLISWNTMISSYAQNNLE 976
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY----GVVPTLEH 536
EA+ F +L + P+ T VL AC G E + + Y G++
Sbjct: 977 MEAICTFRDLLRDGLKPDQFTLASVLRAC-STGDEGEYFTLGSQVHVYAIKCGIINDSFV 1035
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
T ++DL + G + EA EF+ + D W A++
Sbjct: 1036 STALIDLYSKGGKMDEA-EFLLHGKYDFDLASWNAIM 1071
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 123/582 (21%), Positives = 228/582 (39%), Gaps = 83/582 (14%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-----ESLSLVSTM 75
TN IT + G L +AR +FD+ R +V+WN++L Y+++A E L +
Sbjct: 649 TNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLL 708
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ T + +L +C + + +H +K G+E FV L+ Y +
Sbjct: 709 REFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLV 768
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGY 191
+A+ +FD++ E + +LW++ML YV+ + +A F + D +I G
Sbjct: 769 GQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGV 828
Query: 192 AKSVDGCEK---------ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
V K A+K+F + + G N+ + ++ + G
Sbjct: 829 NSDVSNNRKRHAEQVKAYAMKMFPF--DQGSNI---FAWNKKLTEFLHAGQIVAAIDCFK 883
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN----PCLNASNSLINGLISMG 298
L++ D ++ G + D +++ + P + SNSL+N G
Sbjct: 884 TLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAG 943
Query: 299 RIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE 358
+ AE F E + IS+N+MI YA
Sbjct: 944 VVYAAEKTFINSPELDLISWNTMISSYA-------------------------------- 971
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS---LQ 415
QNNL +A+ + + + + + T + + ACS
Sbjct: 972 ----------------QNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G +H + +K ++ +V T+L+D+YS+ G +++A+ ++A+W A+M GY
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYI 1075
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN--EGMKIFRSMKSYGVVPT 533
+A+ F +M E I + T + A L+N +G +I G
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS--GCLINLKQGKQIQAYAIKLGFNND 1133
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
L + V+D+ + G + A E ++ D V W ++S
Sbjct: 1134 LWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISG 1174
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 6/171 (3%)
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+ L+ G+ HA +V + + Y+ +L+ MYS+CGS+ A+ F S ++ W +
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 470 LMNGYSHHGLGS-----EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
++ Y+ S E LF ++ E T +L C+ +G V +
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G L +V++ + G + +A MP E DAV+W +L A
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 209/689 (30%), Positives = 354/689 (51%), Gaps = 65/689 (9%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
V N I+ + G TAR +F+ M R +VSW+ M+ ++ + +++ M
Sbjct: 62 VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE 121
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY-ECFEFVGSGLL-FFYANCFEI 135
NE F+ ++ C+ N G+ I+ V+K+GY E VG L+ F ++
Sbjct: 122 LGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDL 181
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A +VFD KMP++++V WT +I+ +A+
Sbjct: 182 GSAYKVFD-------------------------------KMPERNLVTWTLMITRFAQL- 209
Query: 196 DGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
GC + A+ LF M SG +P+ +T+ SV+ AC LG GK +H +I+ G D
Sbjct: 210 -GCARDAIDLFLDMELSG-YVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVC 267
Query: 255 IGGALIEFYCGCEA---FDGAMRVYDRLENPCLNASNSLINGLISMGRIE-DAELIFNRL 310
+G +L++ Y C A D + +V++++ + + ++I + G + +A +F ++
Sbjct: 268 VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM 327
Query: 311 TEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN----TMISVIPE---- 358
N S++S++K ++++ I S+N ++IS+
Sbjct: 328 ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRM 387
Query: 359 ----------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
E+N V++N+++ GY +N E+A L+ + I + TF+ L
Sbjct: 388 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 447
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ +G++ +G+ +H L+K ++SN + +L+ MYSRCG+I A F+ + NV +WT
Sbjct: 448 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 507
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KS 527
+++ G++ HG + A+ +F MLE PN T+V VLSAC G+++EG K F SM K
Sbjct: 508 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 567
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
+G+VP +EHY C+VDLLGRSG L EA EFI MP+ DA+VW LL AC N E+G
Sbjct: 568 HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRH 627
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVH 647
AA+ + + +AY++LSN++A G+W + IRK + + K+ GCSWIE+ +RVH
Sbjct: 628 AAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVH 687
Query: 648 AFSVEDRNNPNCNVIYATLEHLTANLNSV 676
F V + ++P IY L+ L + + +
Sbjct: 688 RFHVGETSHPQAWQIYQELDQLASKIKEM 716
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 176/411 (42%), Gaps = 74/411 (18%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ T+ ++++C R F GK+VH L++ G E D + LI Y C + A +
Sbjct: 24 PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 83
Query: 276 YDRLENP-----------CLNASNSL-------INGLISMGRIEDA---ELIFNRLTEAN 314
++ + N C A+NS+ ++ +G + + + AN
Sbjct: 84 FEGMGNKRDLVSWSAMVSCF-ANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNAN 142
Query: 315 SISYNSMIKGYAVY----------------------GQVDDSKRLFEKMPHRSIISLNTM 352
+I G+ V G + + ++F+KMP
Sbjct: 143 YAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP---------- 192
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
ERN VTW MI+ + Q A+ L++ M R T+S + AC+ LG
Sbjct: 193 -------ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 245
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC---GSINDAQASFSSISSPNVAAWTA 469
L G+ LH+ +++ +V VG SLVDMY++C GS++D++ F + NV +WTA
Sbjct: 246 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 305
Query: 470 LMNGYSHHG-LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
++ Y G EA+ LF M+ I PN +F VL AC G +++ SY
Sbjct: 306 IITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY----SY 361
Query: 529 GVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
V + CV + + RSG + +A + D+ E + V + A++
Sbjct: 362 AVKLGIASVNCVGNSLISMYARSGRMEDARKAF-DILFEKNLVSYNAIVDG 411
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
MT + D T T+S+L +C + Q G+L+H L+++ E + V +L+ +YS+C
Sbjct: 17 MTQQNAPPDLT--TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKC 74
Query: 447 GSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
G A+ F + + ++ +W+A+++ ++++ + +A+ F MLE PN F V
Sbjct: 75 GDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAV 134
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGR-SGHLHEAEEFIKDM 560
+ AC A G I+ + G LE CV +D+ + SG L A + M
Sbjct: 135 IRACSNANYAWVGEIIYGFVVKTGY---LEADVCVGCELIDMFVKGSGDLGSAYKVFDKM 191
Query: 561 PIELDAVVWGALLS 574
P E + V W +++
Sbjct: 192 P-ERNLVTWTLMIT 204
>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 799
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 205/660 (31%), Positives = 322/660 (48%), Gaps = 82/660 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G + +AR LFD MP R+VVS+ TM+ K + E++ L +V T S
Sbjct: 164 KAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISG 223
Query: 90 ILSVCAQLNSL-IDGKQIHCLVLKSG--YECF--------EF------VGSG-------- 124
+ N+L + K + C V +G + C EF VGS
Sbjct: 224 FVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFES 283
Query: 125 -------LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
L+ Y + A++VFDE+ + + W+ +L Y + + A V MP
Sbjct: 284 SIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMP 343
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+++ V W LI+ + + + E A+KL+ M G PN F SV+ ACA L G
Sbjct: 344 ERNEVSWGTLIARHEQRGNAAE-AVKLYSQMLADGCR-PNISCFSSVLSACATLEDLRGG 401
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
+H +K G + + +LI+ YC C+
Sbjct: 402 ARIHARSLKMGSSTNVFVSSSLIDMYCKCK------------------------------ 431
Query: 298 GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
+ DA+ IF+ L E N + +NS+ GY+ G++ ++ LF+KMP
Sbjct: 432 -KCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMP--------------- 475
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
RN +WN++ISGY QN AL+ + M TFS + AC+ L SL G
Sbjct: 476 --ARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTG 533
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
++ HA +K E ++++GT+L DMY++ G + ++ F + N WTA++ G + +
Sbjct: 534 KMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAEN 593
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
GL E++LLFE M+ + PN TF+ +L AC GLV + + F M+++G+ P +HY
Sbjct: 594 GLAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQAWGISPKEKHY 653
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
TC+VD+L R+G L EAE + P + +A W ALLSAC + N E+GERAA+++ L K
Sbjct: 654 TCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGK 713
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+ YV+LSN+YA G+W IR + +KKD GCSW+++ + HAF + +P
Sbjct: 714 DNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGGCSWVQVRGQYHAFFSWEAKHP 773
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 131/534 (24%), Positives = 223/534 (41%), Gaps = 117/534 (21%)
Query: 106 IHCLVLKSGYECFEFVGSGLLFFYA-------------NCF------------------- 133
+H ++SG V S LL YA +C
Sbjct: 105 LHAHAVRSGVAADTSVASHLLTTYAAFARAAECDRAFGDCVAAGAASPFTYDFMVHEHVK 164
Query: 134 --EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+I A+ +FD + E + + ++ M+ ++ +++A +++ + P V +T ISG+
Sbjct: 165 AGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGF 224
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
++ + AL +FR M G PN TF +I+AC G F + G IK F F
Sbjct: 225 VRN-ELHHNALGVFRKMVSCGVR-PNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNF-F 281
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
+ SI NSLI + MG A +F+ +
Sbjct: 282 ESSI-----------------------------EVQNSLITLYLRMGDAAAARKVFDEMD 312
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
+ +S+ +++ Y+ G +D ++R+ + MP ERN V+W ++I+
Sbjct: 313 VKDVVSWTALLDVYSESGDLDGARRVLDAMP-----------------ERNEVSWGTLIA 355
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
+ Q +A++LY M S FS + AC+ L L+ G +HA +K +
Sbjct: 356 RHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSST 415
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
NV+V +SL+DMY +C DAQ F ++ N+ W +L +GYS++G EA+ LF+ M
Sbjct: 416 NVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMP 475
Query: 492 EQDI-------------------------------VPNAATFVGVLSACVR-AGLVNEGM 519
+++ VP TF VL AC LV M
Sbjct: 476 ARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKM 535
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+++K G+ ++ T + D+ +SG L ++ MP E + V W A++
Sbjct: 536 AHAKTIK-LGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMP-ERNDVTWTAMI 587
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 4/229 (1%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E IV N + NG++V A LF +MP R + SWNT++ GY++ +F ++L +
Sbjct: 445 EKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNA 504
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M S E TFS++L CA L SL+ GK H +K G E F+G+ L YA +
Sbjct: 505 MLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGD 564
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV--WTKLISGYA 192
++ +KR+F ++ E N++ W+ M+ G + L ++ +F M + T L +A
Sbjct: 565 LQSSKRMFYQMPERNDVTWTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFA 624
Query: 193 KSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
S G E+A+ F M+ G + P E + ++ AR G E + +
Sbjct: 625 CSHGGLVEQAIHYFEKMQAWGIS-PKEKHYTCMVDVLARAGRLIEAEAL 672
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 213/687 (31%), Positives = 331/687 (48%), Gaps = 90/687 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I R L AR +F++M R VSWN+++ GY ++++L + + +
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T S++L C L ++ +G +H ++ K G +G+GLL Y + EA+RV
Sbjct: 220 PDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F KM KD V W +I GYA+ + E +
Sbjct: 280 FS-------------------------------KMAVKDSVTWNTMICGYAQ-LGRHEAS 307
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+KLF M + +P+ + S IRAC + G GK VH LI GFE D LI+
Sbjct: 308 VKLFMDMIDG--FVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILID 365
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLING---------------LISMGRIEDAEL- 305
Y C A V+D + NSLING ++ M R D+
Sbjct: 366 MYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTF 425
Query: 306 -----IFNRLTEANS-----------------ISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
IF++L + N I NS++ YA G++DD ++F M
Sbjct: 426 VLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSA 485
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
IIS WN++I+ V + Q+ MR + +T
Sbjct: 486 HDIIS-----------------WNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLG 528
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ CS L +QG+ +H ++ K+ FESNV +G +L++MYS+CGS+ + F + +
Sbjct: 529 ILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKD 588
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V WTAL++ + +G G +A+ F+ M ++P++ F+ + AC +G+V EG++ F
Sbjct: 589 VVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFD 648
Query: 524 SMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
MK+ Y + P +EHY CVVDLL RSG L +AEEFI MP++ DA +WGALLSAC N
Sbjct: 649 RMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNT 708
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
+ +R ++K+ L+ YV++SNIYA LGKW + +R + +KK+PG SWIE+
Sbjct: 709 NIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEI 768
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHL 669
RV+ F D++ + + LE+L
Sbjct: 769 QKRVYVFRTGDKSFEQYDKVKDLLEYL 795
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 140/597 (23%), Positives = 271/597 (45%), Gaps = 57/597 (9%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQM-PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
++ + K I++ + +++ ++F + P V WN+++ + F ++L + M
Sbjct: 54 VIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMR 113
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
++ + TF ++++ CA++ L G +H ++ G+E ++G+ L+ Y+ +++
Sbjct: 114 EKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLD 173
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+ VF+E M +D V W LISGY S
Sbjct: 174 NARYVFEE-------------------------------MSNRDSVSWNSLISGYC-SNG 201
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E AL ++ R +G +P+ +T SV+ AC L A EG VHG++ K G D IG
Sbjct: 202 FWEDALDMYHKFRMTGM-VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIG 260
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA--- 313
L+ Y E A RV+ ++ N++I G +GR E + +F + +
Sbjct: 261 NGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVP 320
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI----ISLNTMISVIPEME--------- 360
+ +S S I+ G + K + + + ++ N +I + +
Sbjct: 321 DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF 380
Query: 361 -----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ VTWNS+I+GY Q+ +++ L+ + M K+ TF +L S L +
Sbjct: 381 DTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADIN 439
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
QG+ +H ++K FE+ + +G SL+D+Y++CG ++D FS +S+ ++ +W ++
Sbjct: 440 QGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSV 499
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
H + + M + ++P+ AT +G+L C + +G +I + G +
Sbjct: 500 HFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVP 559
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
++++ + G L + K M E D V W AL+SA + + +A Q M
Sbjct: 560 IGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYGEGKKALKAFQDM 615
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 204/684 (29%), Positives = 332/684 (48%), Gaps = 91/684 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G LV R +FD++ V WN ++ Y+K F ES+SL M + V N TF+ +L
Sbjct: 418 GDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVL 477
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
A L + + K++H VLK G+ V + L+ Y +E A +FDEL E + +
Sbjct: 478 KCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVV 537
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ G V + ++FI+M LI G +
Sbjct: 538 SWNSMINGCVVNGFSGNGLEIFIQM----------LILGVEVDLT--------------- 572
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
T SV+ A A +G G+ +HG +K F + L++ Y C +G
Sbjct: 573 --------TLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNG 624
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE------------------- 312
A V+ ++ + + + S I + G DA +F+ +
Sbjct: 625 ATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACAC 684
Query: 313 --------------------ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
+N N++I YA G V++++ +F K+P + I+S
Sbjct: 685 SSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVS---- 740
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
WN+MI GY QN+L +AL+L++ M+K T + + AC+ L
Sbjct: 741 -------------WNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLA 786
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+L +G+ +H H+++ + S+++V +LVDMY++CG + AQ F I ++ +WT ++
Sbjct: 787 ALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIA 846
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY-GVV 531
GY HG G+EA+ F M I P+ ++F +L+AC +GL+NEG K F SM++ GV
Sbjct: 847 GYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVE 906
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P LEHY CVVDLL R G+L +A +FI+ MPI+ D +WG LLS C ++++ E+ A+
Sbjct: 907 PKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEH 966
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+F L+ YV+L+N+YA KW + +RKR+ K++PGCSWIE+ + + F
Sbjct: 967 IFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVA 1026
Query: 652 EDRNNPNCNVIYATLEHLTANLNS 675
+ +P I L LT + +
Sbjct: 1027 GNSKHPQAKRIDVLLRKLTMQMQN 1050
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 250/517 (48%), Gaps = 57/517 (11%)
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+L ++ ++L +CA+ SL DGK++H +++ +G E +G+ L+F Y NC ++ + ++
Sbjct: 366 ELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRK 425
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+FD++ D LW+L++ Y + ++ +F KM K VV
Sbjct: 426 IFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVV------------------ 467
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
N YTF V++ A LG E K VHG ++K GF + ++ +LI
Sbjct: 468 ---------------GNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLI 512
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSI 316
Y + A ++D L P + + NS+ING + G + IF ++ E +
Sbjct: 513 AAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLT 572
Query: 317 SYNSMIKGYAVYGQVDDSKRLF---------EKMPHRSII--------SLNTMISVIPEM 359
+ S++ +A G + + L E++ + + +LN V +M
Sbjct: 573 TLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 632
Query: 360 -ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+ V+W S I+ YV+ L+ A+ L+ M+ + T + + HAC+C SL +G+
Sbjct: 633 GDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGR 692
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H++++K SN+ V +L++MY++CGS+ +A+ FS I ++ +W ++ GYS +
Sbjct: 693 DVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNS 752
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
L +EA+ LF M +Q P+ T VL AC +++G +I + G L
Sbjct: 753 LPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVAC 811
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+VD+ + G L A + + DM + D + W +++
Sbjct: 812 ALVDMYAKCGLLVLA-QLLFDMIPKKDLISWTVMIAG 847
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 115/516 (22%), Positives = 213/516 (41%), Gaps = 120/516 (23%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V +N + + G L A +F +M T+VSW + + Y + + +++ L M
Sbjct: 606 VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQS 665
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V+ + T ++I+ CA +SL G+ +H V+K+G V + L+ YA C +EE
Sbjct: 666 KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEE 725
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VF ++ + + W+ M+ GY Q +L ++A ++F+ M K+
Sbjct: 726 ARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ------------------ 767
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
F+ P++ T V+ ACA L A +G+ +HG +++ G+ D +
Sbjct: 768 -------FK---------PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVAC 811
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL++ Y C GL+ + A+L+F+ + + + IS
Sbjct: 812 ALVDMYAKC--------------------------GLLVL-----AQLLFDMIPKKDLIS 840
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+ MI GY ++G +++ F +M
Sbjct: 841 WTVMIAGYGMHGFGNEAISTFNEM------------------------------------ 864
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVG 436
R I+ S+FSV+ +ACS G L +G + ++ + E +
Sbjct: 865 ------------RIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHY 912
Query: 437 TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYS-HHGLG-SEAVLLFEIMLEQ 493
+VD+ +R G+++ A S+ P+ W L++G HH + +E V LE
Sbjct: 913 ACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEP 972
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
D N +V + + A E K+ + M+ G
Sbjct: 973 D---NTRYYVVLANVYAEAEKWEEVKKLRKRMQKRG 1005
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 174/402 (43%), Gaps = 71/402 (17%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
TN I + G + AR +F ++P++ +VSWNTM+ GYS+ + +E+L L M +
Sbjct: 710 TNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QF 768
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
K ++ T + +L CA L +L G++IH +L+ GY V L+ YA C + A+
Sbjct: 769 KPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQL 828
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+FD + + + + W++M+ GY + G+ +
Sbjct: 829 LFDMIPKKDLISWTVMIAGYG--------------------------MHGFG------NE 856
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIGGAL 259
A+ F MR +G P+E +F ++ AC+ G EG K + + +CG E +
Sbjct: 857 AISTFNEMRIAGIE-PDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACV 915
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED--------AELIFNRLT 311
++ + Y +E+ + ++ L+S RI AE IF L
Sbjct: 916 VDLLA---RMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIF-ELE 971
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP-VTW---- 366
N+ Y + YA + ++ K+L ++M R ++NP +W
Sbjct: 972 PDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRG-------------FKQNPGCSWIEVG 1018
Query: 367 ---NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
N ++G N+ H +A ++ + +RKL + + +F
Sbjct: 1019 GKFNIFVAG---NSKHPQAKRIDVLLRKLTMQMQNEDYFSMF 1057
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 109/253 (43%), Gaps = 8/253 (3%)
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER--NPVTWN--SMISGYVQNNLHEKAL 383
Y + ++ +F K P R+ + L++ + V P + VT N + I+ + + A+
Sbjct: 298 YTKKSHNRFIFFKQPRRTCL-LHSTVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAI 356
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+L + + +++ + C+ SL+ G+ +H+ ++ + +G LV MY
Sbjct: 357 ELLTKSKSYELGL--NSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMY 414
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
CG + + F I + V W LM+ Y+ G E+V LF+ M + +V N TF
Sbjct: 415 VNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFT 474
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
VL G V E ++ + G ++ + G + A ++ E
Sbjct: 475 CVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-E 533
Query: 564 LDAVVWGALLSAC 576
D V W ++++ C
Sbjct: 534 PDVVSWNSMINGC 546
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 215/664 (32%), Positives = 331/664 (49%), Gaps = 66/664 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-SNVKLNETTFSTILSVCA 95
AR LF +P + +N ++ G+S S+SL + + R +N+ + T++ ++ C+
Sbjct: 63 ARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACS 122
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L+ +H + GY FVGS L+ Y + A++VFD
Sbjct: 123 NDKHLM---LLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFD------------ 167
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGEN 214
MP++D V+W +I+G K+ C + +++LFR M G
Sbjct: 168 -------------------GMPERDTVLWNTMINGLVKNC--CFDDSIQLFREMVADGVR 206
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
+ + T +V+ A A L G + L +K GF F + + LI Y C + A
Sbjct: 207 V-DSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARL 265
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG----YAVYGQ 330
++ R+ P L A N++I+G + G E + +F L + +S I G ++ +G
Sbjct: 266 LFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGH 325
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVI-------------------PEMERNPVTWNSMIS 371
+ + + +S I LN +S E+ V WN+MIS
Sbjct: 326 LHLACSI-HGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMIS 384
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP-FE 430
GY QN E A+ L+ M K T + + AC+ LGSL G+ +H HL+K+ E
Sbjct: 385 GYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVH-HLIKSENLE 443
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
N+YV T+LVDMY++CG+I++A F S+S N W ++ GY HG G EA+ L+ M
Sbjct: 444 PNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEM 503
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGH 549
L P+A TF+ VL AC AGLV EG +IF +M Y + P +EHY C+VD+LGRSG
Sbjct: 504 LHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQ 563
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
L +A EFIK MP+E VWG LL AC + ++ A++++F LD + YV+LSNI
Sbjct: 564 LEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNI 623
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
Y+V + K IR+ + ++ K PGC+ IE+N H F DR++ + IYA LE L
Sbjct: 624 YSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKL 683
Query: 670 TANL 673
T +
Sbjct: 684 TGKM 687
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/504 (25%), Positives = 214/504 (42%), Gaps = 69/504 (13%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
++V AR +FD MP R V WNTM+ G K FD+S+ L M V+++ +T + +L
Sbjct: 158 RVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLP 217
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
A+L L G I CL LK G+ ++V +GL+ Y+ C ++ A+ +F ++
Sbjct: 218 AAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRIN------ 271
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
+ D++ + +ISG+ + G E ++KLFR + SG
Sbjct: 272 -------------------------RPDLIAYNAMISGFTAN-GGTECSVKLFRELLFSG 305
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
E + + T +I + G +HG +K G + ++ A Y D A
Sbjct: 306 ERVSSS-TIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLA 364
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVY 328
++D + A N++I+G G E A +F + + N+++ +++ A
Sbjct: 365 RHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQL 424
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISV---------------IPEM--------ERNPVT 365
G + F K H I S N ++ I E E+N VT
Sbjct: 425 GSLS-----FGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVT 479
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHL 424
WN+MI GY + +AL+LY M L + + TF + +ACS G + +G ++ H +
Sbjct: 480 WNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMV 539
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEA 483
K E + +VD+ R G + A + P A W L+ H A
Sbjct: 540 NKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIA 599
Query: 484 VLLFEIMLEQDIVPNAATFVGVLS 507
L E + E D P + + +LS
Sbjct: 600 RLASERLFELD--PGSVGYYVLLS 621
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 198/643 (30%), Positives = 313/643 (48%), Gaps = 73/643 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ T I + G++ +AR LFD+MP + V+WN ML YS+ ++L L M
Sbjct: 5 LFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRI 64
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+N + + TF+ LS CA L L G +IH V+ SG + VG+ L+ Y C
Sbjct: 65 ANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATS 124
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+RVF+E+ NE+ W +L Y L A VF MPKK + W +ISGY + D
Sbjct: 125 ARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGD- 183
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E L LF+ MRE P+++TF +++ A L G ++HG +IK G
Sbjct: 184 VELCLGLFKKMREDSLQ-PDQWTFSALVNALCELQEPSYGYMMHGFIIKSG--------- 233
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
+D M+V++ + + N++I+ + +G +A L+F E N +S
Sbjct: 234 -----------WDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVS 282
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+ SMI GYA G + + F KM ME +
Sbjct: 283 WTSMITGYARNGHGEQALSFFVKM-----------------MENH--------------- 310
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
I TF + HACS L +L G+++H ++ F + V VG
Sbjct: 311 ----------------IQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGN 354
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
LV+MY++CG I + +F I ++ +W A++ G HG ++A+ L+E M+ + P
Sbjct: 355 GLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKP 414
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
+ TF+G+L C +GL+ +G +F SM S YG+ EH C+VDLLGR G+L +A E
Sbjct: 415 DKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQAREL 474
Query: 557 IKDMPI--ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
+ + + + ALL AC+ + +G + + + + +YV+LSN+Y V G
Sbjct: 475 VDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSG 534
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+W + +RK +T VKK PGCSWIE+ ++V F + ++P
Sbjct: 535 QWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNHSHP 577
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 10/192 (5%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
MK++ +S ++TQ VS N I + G A +F P + VVSW +M+ GY+
Sbjct: 238 MKVF--ESIGILTQ----VSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYA 291
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ +++LS M ++++ ++ TF +L C+ L +L GK IH ++ G+ +
Sbjct: 292 RNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVD 351
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP--- 177
VG+GL+ YA C +I+ + F E+ + + W+ ML G + A +++ +M
Sbjct: 352 VGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASG 411
Query: 178 -KKDVVVWTKLI 188
K D V + L+
Sbjct: 412 MKPDKVTFIGLL 423
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+H+HL +T TS + ++ G I A+ F + + AW A++ YS GL
Sbjct: 1 MHSHLFQT---------TSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGL 51
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
+A+ LF M + P+ TF LSAC G + GMKI + G +L
Sbjct: 52 HQQALCLFHHMRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNS 111
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++D+ G+ A ++M I ++ V W +LL A
Sbjct: 112 LIDMYGKCLSATSARRVFEEMSI-MNEVSWCSLLFA 146
>gi|413952592|gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays]
Length = 683
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 199/674 (29%), Positives = 339/674 (50%), Gaps = 54/674 (8%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+ L+ N+++ R G+ AR LFD +P R+VV+WN++L S+ + +
Sbjct: 33 DGLVRQHNRSLVGLLRRGRFSAARRLFDALPARSVVTWNSLLAALSRGSDVRAARCFFDA 92
Query: 75 MHRSNVKLNETTFSTILSVCA---QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M ++ +++T+LS A Q N L +++ + + + S LL Y
Sbjct: 93 MPVRDI----ISWNTLLSAYARSLQPNDLAAARRLFYEMPQRDAVSW----STLLGAYTR 144
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+EEA+R+FDE+ N W+ M+ G+ M A +VF MP KD + ++SG+
Sbjct: 145 RGLMEEAQRLFDEMPHRNASSWNTMITGFFAVGQMRKALNVFAAMPDKDSASLSAMVSGF 204
Query: 192 AK------SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
+ + D K L + + G F+++I A + G + + + ++
Sbjct: 205 IRNGRLHEADDLLTKRLTVMDMDKAVG-------AFNTLIAAYGQTGRVTDARRLFSMIP 257
Query: 246 KCG----------FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI 295
K FE + +++ Y A ++D + + L + N++I G
Sbjct: 258 KTQNQHKGHKRMVFERNVVSWNSMMMCYIRTGDVCSARALFDEMPHKDLVSWNTMIAGYT 317
Query: 296 SMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
+E+AE +F + + +++++N MI+G+ G V+ ++ F++MP RS I
Sbjct: 318 QASEMEEAEKLFWEVPDPDAVTWNLMIRGFTQKGDVEHARGFFDRMPERSTI-------- 369
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
TWN+MISGY QN ++ ++L+ M ++ T S + AC+ L L+
Sbjct: 370 ---------TWNTMISGYEQNEDYDSTIKLFQRMLEVGERPDHHTLSSVLAACASLAMLR 420
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGY 474
G LH L++ F + +L+ MYSRCG + A+A F + + ++ +W AL+ GY
Sbjct: 421 LGAQLH-QLIEKSFLPDTATNNALMTMYSRCGELISAKAIFGHMHTQRDIVSWNALIGGY 479
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPT 533
G +EA+ LFE M ++P TF+ +LSAC AGLV+EG +F +M YG+ +
Sbjct: 480 EQQGNATEALRLFEEMRSAKVMPTHITFISLLSACGNAGLVSEGRVVFHTMVHDYGLAAS 539
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
+EHY +V+L+GR G L +A E IK MPI D VWGA L AC N + E AA +
Sbjct: 540 VEHYAALVNLIGRHGQLEDALELIKSMPIAPDRAVWGAFLGACTAKKNEPLAEMAANALS 599
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
+D + YV++ N++A G+WG +R+ + L + K PG SWI+L+ +VH F D
Sbjct: 600 KIDPDSSAPYVLMHNLHAHEGRWGSASLVREDMERLGIHKHPGYSWIDLHDKVHVFISGD 659
Query: 654 RNNPNCNVIYATLE 667
++P + I++ LE
Sbjct: 660 TSHPLTHEIFSVLE 673
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 169/465 (36%), Gaps = 155/465 (33%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M E +VS N + R G + +AR LFD+MP + +VSWNTM+ GY++ ++ +E+ L
Sbjct: 269 MVFERNVVSWNSMMMCYIRTGDVCSARALFDEMPHKDLVSWNTMIAGYTQASEMEEAEKL 328
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ + N +I G F G
Sbjct: 329 FWEVPDPD--------------AVTWNLMIRG----------------FTQKG------- 351
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
++E A+ FD + E + + W+ M ISGY
Sbjct: 352 --DVEHARGFFDRMPERSTITWNTM-------------------------------ISGY 378
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
++ D + +KLF+ M E GE P+ +T SV+ ACA L G +H L+ K F
Sbjct: 379 EQNED-YDSTIKLFQRMLEVGER-PDHHTLSSVLAACASLAMLRLGAQLHQLIEKS-FLP 435
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL- 310
D + AL+ Y C G + A+ IF +
Sbjct: 436 DTATNNALMTMYSRC-------------------------------GELISAKAIFGHMH 464
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
T+ + +S+N++I GY G ++ RLFE+M
Sbjct: 465 TQRDIVSWNALIGGYEQQGNATEALRLFEEM----------------------------- 495
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL-HAHLVKTPF 429
R + T TF L AC G + +G+++ H +
Sbjct: 496 -------------------RSAKVMPTHITFISLLSACGNAGLVSEGRVVFHTMVHDYGL 536
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG 473
++V +LV++ R G + DA S+ +P+ A W A +
Sbjct: 537 AASVEHYAALVNLIGRHGQLEDALELIKSMPIAPDRAVWGAFLGA 581
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 209/689 (30%), Positives = 354/689 (51%), Gaps = 65/689 (9%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
V N I+ + G TAR +F+ M R +VSW+ M+ ++ + +++ M
Sbjct: 80 VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE 139
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY-ECFEFVGSGLL-FFYANCFEI 135
NE F+ ++ C+ N G+ I+ V+K+GY E VG L+ F ++
Sbjct: 140 LGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDL 199
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A +VFD KMP++++V WT +I+ +A+
Sbjct: 200 GSAYKVFD-------------------------------KMPERNLVTWTLMITRFAQL- 227
Query: 196 DGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
GC + A+ LF M SG +P+ +T+ SV+ AC LG GK +H +I+ G D
Sbjct: 228 -GCARDAIDLFLDMELSG-YVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVC 285
Query: 255 IGGALIEFYCGCEA---FDGAMRVYDRLENPCLNASNSLINGLISMGRIE-DAELIFNRL 310
+G +L++ Y C A D + +V++++ + + ++I + G + +A +F ++
Sbjct: 286 VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM 345
Query: 311 TEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN----TMISVIPE---- 358
N S++S++K ++++ I S+N ++IS+
Sbjct: 346 ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRM 405
Query: 359 ----------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
E+N V++N+++ GY +N E+A L+ + I + TF+ L
Sbjct: 406 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 465
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ +G++ +G+ +H L+K ++SN + +L+ MYSRCG+I A F+ + NV +WT
Sbjct: 466 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 525
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KS 527
+++ G++ HG + A+ +F MLE PN T+V VLSAC G+++EG K F SM K
Sbjct: 526 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 585
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
+G+VP +EHY C+VDLLGRSG L EA EFI MP+ DA+VW LL AC N E+G
Sbjct: 586 HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRH 645
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVH 647
AA+ + + +AY++LSN++A G+W + IRK + + K+ GCSWIE+ +RVH
Sbjct: 646 AAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVH 705
Query: 648 AFSVEDRNNPNCNVIYATLEHLTANLNSV 676
F V + ++P IY L+ L + + +
Sbjct: 706 RFHVGETSHPQAWQIYQELDQLASKIKEM 734
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 176/411 (42%), Gaps = 74/411 (18%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ T+ ++++C R F GK+VH L++ G E D + LI Y C + A +
Sbjct: 42 PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 101
Query: 276 YDRLENP-----------CLNASNSL-------INGLISMGRIEDA---ELIFNRLTEAN 314
++ + N C A+NS+ ++ +G + + + AN
Sbjct: 102 FEGMGNKRDLVSWSAMVSCF-ANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNAN 160
Query: 315 SISYNSMIKGYAVY----------------------GQVDDSKRLFEKMPHRSIISLNTM 352
+I G+ V G + + ++F+KMP
Sbjct: 161 YAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP---------- 210
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
ERN VTW MI+ + Q A+ L++ M R T+S + AC+ LG
Sbjct: 211 -------ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 263
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC---GSINDAQASFSSISSPNVAAWTA 469
L G+ LH+ +++ +V VG SLVDMY++C GS++D++ F + NV +WTA
Sbjct: 264 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 323
Query: 470 LMNGYSHHG-LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
++ Y G EA+ LF M+ I PN +F VL AC G +++ SY
Sbjct: 324 IITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY----SY 379
Query: 529 GVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
V + CV + + RSG + +A + D+ E + V + A++
Sbjct: 380 AVKLGIASVNCVGNSLISMYARSGRMEDARKAF-DILFEKNLVSYNAIVDG 429
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
MT + D T T+S+L +C + Q G+L+H L+++ E + V +L+ +YS+C
Sbjct: 35 MTQQNAPPDLT--TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKC 92
Query: 447 GSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
G A+ F + + ++ +W+A+++ ++++ + +A+ F MLE PN F V
Sbjct: 93 GDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAV 152
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGR-SGHLHEAEEFIKDM 560
+ AC A G I+ + G LE CV +D+ + SG L A + M
Sbjct: 153 IRACSNANYAWVGEIIYGFVVKTGY---LEADVCVGCELIDMFVKGSGDLGSAYKVFDKM 209
Query: 561 PIELDAVVWGALLS 574
P E + V W +++
Sbjct: 210 P-ERNLVTWTLMIT 222
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 205/682 (30%), Positives = 338/682 (49%), Gaps = 59/682 (8%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T + +NK + E + G L AR +FD+M + +SW T++ GY E+L L
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 75 MH-RSNVKLNETTFSTILSVCAQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M S ++++ S C LNS ++ G+ +H +K+G FVGS LL Y
Sbjct: 106 MRVESGLRIDPFILSLAHKACG-LNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKN 164
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
+I E +RVF E+ N + W+ ++ G V+ +A F +M + V
Sbjct: 165 GKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEY--------- 215
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+ YTF ++ACA GA G+ +H +K GF+
Sbjct: 216 ------------------------DSYTFAIALKACADSGALNYGREIHAQAMKKGFDVS 251
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+ L Y C + + +++++ + + ++I L+ MG+ E A F R+ E
Sbjct: 252 SFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRE 311
Query: 313 A----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII-------SLNTMIS------- 354
+ N ++ ++I G A +++ ++L + H + S+ TM +
Sbjct: 312 SDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTS 371
Query: 355 ---VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
+ EM R+ V+W+++I+GY Q +A +L MR T + + AC
Sbjct: 372 SSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGN 431
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
+ L+ G+ LHA+++ E V ++L++MY +CGSI +A F + + ++ +WTA+
Sbjct: 432 MAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAM 491
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYG 529
+NGY+ HG E + LFE + + P++ TF+GVLSAC AGLV+ G F +M K Y
Sbjct: 492 INGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQ 551
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ P+ EHY C++DLL R+G L +AE I+ MP D VVW LL AC ++E G R A
Sbjct: 552 ISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTA 611
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+++ L+ ++ L+NIYA GKW + DIRK + V K+PG SWI++ V AF
Sbjct: 612 ERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAF 671
Query: 650 SVEDRNNPNCNVIYATLEHLTA 671
DR++P IY L+ L +
Sbjct: 672 VAGDRSHPQGEDIYNMLDLLAS 693
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/540 (35%), Positives = 292/540 (54%), Gaps = 58/540 (10%)
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD-------VFIKMPKKDVVV 183
C + EE K++ + + + S + ++ C + S + D VF + D +
Sbjct: 52 RCSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFL 111
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
W +I G++ S D E++L L++ M N YTF S+++AC+ L A E +H
Sbjct: 112 WNLMIRGFSCS-DEPERSLLLYQRMLCCSAPH-NAYTFPSLLKACSNLSALEETTQIHAQ 169
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA 303
+ K G+E D VY A NSLIN + G + A
Sbjct: 170 ITKLGYEND----------------------VY---------AVNSLINSYAATGNFKLA 198
Query: 304 ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP 363
L+F+R+ + +++S+NS+IKGYA G++D + LF KM +E+N
Sbjct: 199 HLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKM-----------------VEKNA 241
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
++W +MISGYVQ +H++ALQL+ M+ ++ + + AC+ LG+L+QG+ +H++
Sbjct: 242 ISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSY 301
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
L KT + +G L+DMY++CG + +A F +I +V AWTAL++GY++HG G EA
Sbjct: 302 LTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREA 361
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVD 542
+ F M + I PN TF VL+AC GLV EG IF +M + Y + PT+EHY CVVD
Sbjct: 362 ISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVD 421
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISA 602
LL R+G L EA+ FI++MP++ +AV+WGALL AC N+E+GE + + +D
Sbjct: 422 LLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGR 481
Query: 603 YVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
YV +NI+A+ KW K + R+ + V K PGCS I L H F DR++P I
Sbjct: 482 YVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKI 541
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 155/313 (49%), Gaps = 8/313 (2%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A+ +FD WN M+ G+S + + SL L M + N TF ++L
Sbjct: 94 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKA 153
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
C+ L++L + QIH + K GYE + + L+ YA + A +FD + + + + W
Sbjct: 154 CSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSW 213
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESG 212
+ ++ GY + M A +F KM +K+ + WT +ISGY ++ G K AL+LF M+ S
Sbjct: 214 NSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQA--GMHKEALQLFHEMQNS- 270
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+ P+ + + + ACA+LGA +GK +H L K D +G LI+ Y C A
Sbjct: 271 DVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEA 330
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVY 328
+ V+ ++ + A +LI+G G +A F + + N I++ +++ +
Sbjct: 331 LEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYT 390
Query: 329 GQVDDSKRLFEKM 341
G V++ K +F M
Sbjct: 391 GLVEEGKLIFYNM 403
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 117/264 (44%), Gaps = 24/264 (9%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N I + G++ A LF +M + +SW TM+ GY + E+L L M S
Sbjct: 211 VSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNS 270
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+V+ + + + LS CAQL +L GK IH + K+ +G L+ YA C ++ EA
Sbjct: 271 DVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEA 330
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKS 194
VF + + W+ ++ GY +A F++M K +V+ +T +++ A S
Sbjct: 331 LEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLT--ACS 388
Query: 195 VDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGK------------VVH 241
G + KL + E N+ P + V+ +R G E K V+
Sbjct: 389 YTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIW 448
Query: 242 GLLIKC-----GFEFDESIGGALI 260
G L+K E E IG LI
Sbjct: 449 GALLKACRIHKNIELGEEIGEILI 472
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 206/667 (30%), Positives = 334/667 (50%), Gaps = 56/667 (8%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
G L AR +FD M R V WN M+ GY K ++ L M S + N T +
Sbjct: 194 GGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACF 253
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
LSV A + L G Q+H L +K G E V + L+ YA
Sbjct: 254 LSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYA-------------------- 293
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+C + D + +F MP+ D+V W +ISG ++ ++AL LF M++
Sbjct: 294 -----------KCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQN-GFVDQALLLFCDMQK 341
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
SG P+ T S++ A L F +GK +HG +++ D + AL++ Y C A
Sbjct: 342 SGIR-PDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA 326
A VYD + + +++I+G + G ++A +F L E N+++ S++ A
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACA 460
Query: 327 V-----YGQVDDSKRLFEKMPHRSII--SLNTMISVIPEME-----------RNPVTWNS 368
GQ S L R + +L M + ++ ++ VTWNS
Sbjct: 461 SMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNS 520
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
MIS + QN E+AL L+ M + + T S + AC+ L ++ G+ +H ++K P
Sbjct: 521 MISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGP 580
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
++++ ++L+DMY +CG++ A F S+ N +W +++ Y +GL E+V L
Sbjct: 581 IRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLR 640
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
M E+ + TF+ ++SAC AG V EG+++FR M + Y + P +EH+ C+VDL R+
Sbjct: 641 HMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRA 700
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L +A E I DMP + DA +WGALL AC N+E+ E A+Q++F LD YV++S
Sbjct: 701 GKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMS 760
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NI AV G+W +R+ + +V+K PG SW+++N+ H F D+++P+ IY +L+
Sbjct: 761 NINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLK 820
Query: 668 HLTANLN 674
+ L
Sbjct: 821 SILLELR 827
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 3/215 (1%)
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTM--RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ WN +I G + AL Y+ M A TF + +C+ LG++ G+L+H
Sbjct: 110 LPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVH 169
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
+ +++VG++L+ MY+ G + DA+ F ++ + W +M+GY G S
Sbjct: 170 RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVS 229
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
AV LF M PN AT LS + G+++ YG+ + +V
Sbjct: 230 SAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLV 289
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+ + L + + MP + D V W ++S C
Sbjct: 290 SMYAKCKCLDDGWKLFGLMPRD-DLVTWNGMISGC 323
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L A +F+ MP + VSWN+++ Y + ES+SL+ M K + TF
Sbjct: 596 GKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFL 655
Query: 89 TILSVCAQLNSLIDGKQI 106
++S CA + +G ++
Sbjct: 656 ALVSACAHAGQVQEGLRL 673
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 8/182 (4%)
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE-SNVYVGTSLVDMYSRCGSINDAQASF 456
R +VL C L G +H V ++ + T LV MY DA A F
Sbjct: 40 RRLLAVL-RGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVF 98
Query: 457 SSISSPNVA---AWTALMNGYSHHGLGSEAVLLFEIMLEQD--IVPNAATFVGVLSACVR 511
SS+ A W L+ G + G A+L + M +P++ TF V+ +C
Sbjct: 99 SSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAA 158
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
G + G + R+ ++ G+ + + ++ + G L +A + M E D V+W
Sbjct: 159 LGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMA-ERDCVLWNV 217
Query: 572 LL 573
++
Sbjct: 218 MM 219
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 206/667 (30%), Positives = 334/667 (50%), Gaps = 56/667 (8%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
G L AR +FD M R V WN M+ GY K ++ L M S + N T +
Sbjct: 194 GGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACF 253
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
LSV A + L G Q+H L +K G E V + L+ YA
Sbjct: 254 LSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYA-------------------- 293
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+C + D + +F MP+ D+V W +ISG ++ ++AL LF M++
Sbjct: 294 -----------KCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQN-GFVDQALLLFCDMQK 341
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
SG P+ T S++ A L F +GK +HG +++ D + AL++ Y C A
Sbjct: 342 SGIR-PDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA 326
A VYD + + +++I+G + G ++A +F L E N+++ S++ A
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACA 460
Query: 327 V-----YGQVDDSKRLFEKMPHRSII--SLNTMISVIPEME-----------RNPVTWNS 368
GQ S L R + +L M + ++ ++ VTWNS
Sbjct: 461 SMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNS 520
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
MIS + QN E+AL L+ M + + T S + AC+ L ++ G+ +H ++K P
Sbjct: 521 MISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGP 580
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
++++ ++L+DMY +CG++ A F S+ N +W +++ Y +GL E+V L
Sbjct: 581 IRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLR 640
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
M E+ + TF+ ++SAC AG V EG+++FR M + Y + P +EH+ C+VDL R+
Sbjct: 641 HMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRA 700
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L +A E I DMP + DA +WGALL AC N+E+ E A+Q++F LD YV++S
Sbjct: 701 GKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMS 760
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NI AV G+W +R+ + +V+K PG SW+++N+ H F D+++P+ IY +L+
Sbjct: 761 NINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLK 820
Query: 668 HLTANLN 674
+ L
Sbjct: 821 SILLELR 827
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 3/215 (1%)
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTM--RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ WN +I G + AL Y+ M A TF + +C+ LG++ G+L+H
Sbjct: 110 LPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVH 169
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
+ +++VG++L+ MY+ G + DA+ F ++ + W +M+GY G S
Sbjct: 170 RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVS 229
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
AV LF M PN AT LS + G+++ YG+ + +V
Sbjct: 230 SAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLV 289
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+ + L + + MP + D V W ++S C
Sbjct: 290 SMYAKCKCLDDGWKLFGLMPRD-DLVTWNGMISGC 323
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L A +F+ MP + VSWN+++ Y + ES+SL+ M K + TF
Sbjct: 596 GKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFL 655
Query: 89 TILSVCAQLNSLIDGKQI 106
++S CA + +G ++
Sbjct: 656 ALVSACAHAGQVQEGLRL 673
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 8/182 (4%)
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE-SNVYVGTSLVDMYSRCGSINDAQASF 456
R +VL C L G +H V ++ + T LV MY DA A F
Sbjct: 40 RRLLAVL-RGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVF 98
Query: 457 SSISSPNVA---AWTALMNGYSHHGLGSEAVLLFEIMLEQD--IVPNAATFVGVLSACVR 511
SS+ A W L+ G + G A+L + M +P++ TF V+ +C
Sbjct: 99 SSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAA 158
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
G + G + R+ ++ G+ + + ++ + G L +A + M E D V+W
Sbjct: 159 LGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMA-ERDCVLWNV 217
Query: 572 LL 573
++
Sbjct: 218 MM 219
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 216/686 (31%), Positives = 332/686 (48%), Gaps = 76/686 (11%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
+G L A LFD+MP + V+WNTM+ GY + + + +M R + + TF +I
Sbjct: 49 SGDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSI 108
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L A G+Q+H L++K GYE + GS LL YA C +E
Sbjct: 109 LKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVE-------------- 154
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
DA+DVF MP ++ V W LI G+ + D + A L M++
Sbjct: 155 -----------------DAYDVFQGMPVRNFVSWNALIDGFVQVGDR-DTAFWLLDCMQK 196
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G + + TF ++ + +H +IK G EF ++ A + Y C +
Sbjct: 197 EGVRVEDG-TFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLE 255
Query: 271 GAMRVYD-RLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAV-- 327
A RV+D + L NS++ + + EDA FN E + I Y
Sbjct: 256 DAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDA---FNLFLEMQGFGFEPDIYTYTCVI 312
Query: 328 ----------YGQVDDS---KRLFEKMPHRSIISLNTMISVIPEM--------------- 359
YG+ + KR E+ S+ N +I++ ++
Sbjct: 313 SACFAAAHKNYGKSFHALVIKRGLEE----SVTICNALITMYLKLNNKSMEAALNLFHSM 368
Query: 360 -ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
++ V+WNS+++G+ Q E AL+L+ MR + +S + +CS L LQ GQ
Sbjct: 369 KSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQ 428
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H VKT F+SN +V +SL+ MYS+CG I DA F + + W ++M Y+ HG
Sbjct: 429 QIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHG 488
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHY 537
G A+ LF IM E+++ + TFV VL+AC GLV +G + +SM+S YG+ P +EHY
Sbjct: 489 QGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHY 548
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
C VDL GR+G+L EA+ I MP + +A+V LL AC N+E+ + A ++ ++
Sbjct: 549 ACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEP 608
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+ YVILSN+Y L +W K + + + +VKK PG SWIE+ + VHAF EDR++P
Sbjct: 609 EEHCTYVILSNMYGHLKRWDDKASVTRLMRERKVKKVPGWSWIEVKNEVHAFKAEDRSHP 668
Query: 658 NCNVIYATLEHL---TANLNSVVLFD 680
+Y L L L+S+ FD
Sbjct: 669 YSEDVYQILGELMEEMKRLHSLASFD 694
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 193/458 (42%), Gaps = 92/458 (20%)
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCF--EIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
HC KSG +V + +LF Y+ CF ++ A ++FDE+ + + W+ M+ GYV+
Sbjct: 22 HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESG 81
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
+ A++ M ++ G+ DG YTF S+
Sbjct: 82 NLGAAWEFLKSMKRR----------GF--QADG---------------------YTFGSI 108
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
++ A G+ VH L++K G+E G AL++ Y CE + A V+ +
Sbjct: 109 LKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNF 168
Query: 285 NASNSLINGLISMG-----------------RIEDAELI----------FNRLT------ 311
+ N+LI+G + +G R+ED F +LT
Sbjct: 169 VSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCK 228
Query: 312 ------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
E + N+ + Y+ G ++D+KR+F+ ++ T R+ VT
Sbjct: 229 IIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDG-------AVGT---------RDLVT 272
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WNSM+ Y+ ++ E A L++ M+ + T++ + AC G+ HA ++
Sbjct: 273 WNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVI 332
Query: 426 KTPFESNVYVGTSLVDMYSRCG--SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
K E +V + +L+ MY + S+ A F S+ S + +W +++ G+S G +A
Sbjct: 333 KRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDA 392
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+ LF M + + VL +C ++ G +I
Sbjct: 393 LKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQI 430
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 197/493 (39%), Gaps = 104/493 (21%)
Query: 20 STNKAITECGRNGQLVTARNLFD-QMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
+T A +ECG L A+ +FD + R +V+WN+ML Y K +++ +L M
Sbjct: 243 ATLTAYSECGL---LEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGF 299
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY--ANCFEIE 136
+ + T++ ++S C GK H LV+K G E + + L+ Y N +E
Sbjct: 300 GFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSME 359
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A +F + + + W+ +L G+ Q D
Sbjct: 360 AALNLFHSMKSKDRVSWNSILTGFSQMGFSED---------------------------- 391
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
ALKLF MR S E + ++Y + +V+R+C+ L G+ +H L +K GF+ ++ +
Sbjct: 392 ----ALKLFGHMRSSLEEI-DDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVA 446
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
+LI Y C G IEDA F T+ +SI
Sbjct: 447 SSLIFMYSKC-------------------------------GIIEDAWKCFEDTTKESSI 475
Query: 317 SYNSMIKGYAVYGQVDDSKRLFE-------KMPHRSIISLNTMISVIPEMERNPVTWNSM 369
++NS++ YA +GQ D + LF K+ H + +++ T S + +E+ SM
Sbjct: 476 TWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSM 535
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
S Y + M A+D LF G L++ + L + PF
Sbjct: 536 ESDY--------GIPPRMEHYACAVD--------LFGRA---GYLEEAKAL---IDSMPF 573
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSS---ISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ N V +L+ CG+I A S + + L N Y H + +
Sbjct: 574 QPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDKASV 633
Query: 487 FEIMLEQDI--VP 497
+M E+ + VP
Sbjct: 634 TRLMRERKVKKVP 646
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 73/171 (42%), Gaps = 8/171 (4%)
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRC--GSINDAQASFSSISSPNVAAWTALMNGYSH 476
L H K+ S++YV +++ YS+C G +N A F + + W ++ GY
Sbjct: 20 LTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVE 79
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
G A + M + + TF +L A + G ++ + G ++
Sbjct: 80 SGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYA 139
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
+ ++D+ + + +A + + MP+ + V W AL+ ++VG+R
Sbjct: 140 GSALLDMYAKCERVEDAYDVFQGMPVR-NFVSWNALIDGF-----VQVGDR 184
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/657 (29%), Positives = 331/657 (50%), Gaps = 57/657 (8%)
Query: 41 FDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSL 100
FD++ I + WN ++ +K F S+ L M S V+++ TFS + + L S+
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
G+Q+H +LKSG+ VG+ L+ FY ++ A++VFDE+ E + + W+ ++ GY
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
V L VF++M L+SG + T
Sbjct: 121 VSNGLAEKGLSVFVQM----------LVSGIEIDL-----------------------AT 147
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
SV CA G+ VH + +K F ++ L++ Y C D A V+ +
Sbjct: 148 IVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 207
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSKR 336
+ + + S+I G G +A +F + E + + +++ A Y +D+ KR
Sbjct: 208 DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 267
Query: 337 LFEKMPHR----SIISLNTMIS-------------VIPEME-RNPVTWNSMISGYVQNNL 378
+ E + I N ++ V EM ++ ++WN++I GY +N
Sbjct: 268 VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCY 327
Query: 379 HEKALQLY-MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+AL L+ + + + T + + AC+ L + +G+ +H ++++ + S+ +V
Sbjct: 328 ANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN 387
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SLVDMY++CG++ A F I+S ++ +WT ++ GY HG G EA+ LF M + I
Sbjct: 388 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEA 447
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
+ +FV +L AC +GLV+EG + F M+ + PT+EHY C+VD+L R+G L +A F
Sbjct: 448 DEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRF 507
Query: 557 IKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
I++MPI DA +WGALL C ++++ E+ A+K+F L+ + YV+++NIYA KW
Sbjct: 508 IENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKW 567
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ +RKR+ ++K+PGCSWIE+ RV+ F D +NP I A L + A +
Sbjct: 568 EQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 624
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 206/473 (43%), Gaps = 58/473 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+N ++ +AR +FD+M R V+SWN+++ GY ++ LS+ M S ++++ T +
Sbjct: 91 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 150
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+ + CA + G+ +H + +K+ + + + LL Y+ C +++ AK VF E+ + +
Sbjct: 151 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 210
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ ++ M+ GY + L + A+KLF M
Sbjct: 211 VVSYTSMIAGYAREGLAGE--------------------------------AVKLFEEME 238
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E G + P+ YT +V+ CAR EGK VH + + FD + AL++ Y C +
Sbjct: 239 EEGIS-PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 297
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI------------- 316
A V+ + + + N++I G +A +FN L E
Sbjct: 298 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 357
Query: 317 --SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI--------PEMERNPVTW 366
S ++ KG ++G + + ++ S++ + + ++ V+W
Sbjct: 358 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 417
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLV 425
MI+GY + ++A+ L+ MR+ I+ +F L +ACS G + +G + +
Sbjct: 418 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 477
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
+ E V +VDM +R G + A ++ P+ W AL+ G H
Sbjct: 478 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 530
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 16/256 (6%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS-TMH 76
I +N + + G + A +F +M ++ ++SWNT++ GYSK +E+LSL + +
Sbjct: 281 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 340
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+E T + +L CA L++ G++IH ++++GY V + L+ YA C +
Sbjct: 341 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 400
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK----KDVVVWTKLISGYA 192
A +FD++ + + W++M+ GY +A +F +M + D + + L+ YA
Sbjct: 401 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL--YA 458
Query: 193 KSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFE 250
S G ++ + F MR + P + ++ AR G + + + + I
Sbjct: 459 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP--- 515
Query: 251 FDESIGGALIEFYCGC 266
D +I GAL+ CGC
Sbjct: 516 -DATIWGALL---CGC 527
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 199/659 (30%), Positives = 340/659 (51%), Gaps = 56/659 (8%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
+ A +F+ + + V ++TML GY+K + +++ M V F+ +L +
Sbjct: 92 ITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQL 151
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
+ L G++IH +V+ +G++ F + ++ YA C +IE
Sbjct: 152 SGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIE----------------- 194
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
DA+ +F +MP++D+V W +++GYA++ +A+++ M+E+G+
Sbjct: 195 --------------DAYKMFERMPQRDLVSWNTVVAGYAQN-GFARRAVQVVLQMQEAGQ 239
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+ T SV+ A A L A G+ +HG + GFE+ ++ A+++ Y C + A
Sbjct: 240 K-PDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSAR 298
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYG 329
V+ + + + + N++I+G G E+A F ++ E ++S + A G
Sbjct: 299 LVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLG 358
Query: 330 QVDDSK---RLF-EKMPHRSIISLNTMISVIPEMER--------------NPVTWNSMIS 371
++ + RL EK + +N++IS+ + +R VTWN+MI
Sbjct: 359 DLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMIL 418
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
GY QN +AL L+ M+ I T + A + L +Q + +H ++T +
Sbjct: 419 GYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDK 478
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
NV+V T+L+D +++CG+I A+ F + +V W A+++GY +G G EA+ LF M
Sbjct: 479 NVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQ 538
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHL 550
+ PN TF+ V++AC +GLV EGM F SMK +YG+ PT++HY +VDLLGR+G L
Sbjct: 539 NGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRL 598
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
+A +FI+DMP++ V GA+L AC N+E+GE+ A ++F LD +V+L+N+Y
Sbjct: 599 DDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMY 658
Query: 611 AVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
A W K +R + ++K PGCS +EL + VH F N+P IYA LE L
Sbjct: 659 ASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETL 717
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 187/460 (40%), Gaps = 90/460 (19%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
Q+ A +F++MP R +VSWNT++ GY++ ++ +V M + K + T ++L
Sbjct: 192 QIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLP 251
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
A L +L G+ IH ++G+E V + +L Y C + A+ VF + N +
Sbjct: 252 AVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVS 311
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
W+ M+ GY Q +AF F+KM +G E
Sbjct: 312 WNTMIDGYAQNGESEEAFATFLKMLD-----------------EGVE------------- 341
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
P + + ACA LG G+ VH LL + FD S+ +LI Y C+ D A
Sbjct: 342 ---PTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIA 398
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIF------------------------- 307
V+ L++ + N++I G G + +A +F
Sbjct: 399 ASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADL 458
Query: 308 --------------NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
L + N ++I +A G + +++LF+ M
Sbjct: 459 SVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLM------------ 506
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
ER+ +TWN+MI GY N +AL L+ M+ ++ TF + ACS G
Sbjct: 507 -----QERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGL 561
Query: 414 LQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDA 452
+++G + + E + ++VD+ R G ++DA
Sbjct: 562 VEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDA 601
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 142/320 (44%), Gaps = 56/320 (17%)
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
L+IK GF + LI +C + A RV++ +E+ ++++ G + D
Sbjct: 66 LIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRD 125
Query: 303 AELIFNRLT---------------------------------------EANSISYNSMIK 323
A + R+ ++N + +++
Sbjct: 126 AVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVN 185
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
YA Q++D+ ++FE+MP R ++S WN++++GY QN +A+
Sbjct: 186 LYAKCRQIEDAYKMFERMPQRDLVS-----------------WNTVVAGYAQNGFARRAV 228
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
Q+ + M++ T + A + L +L+ G+ +H + + FE V V T+++D Y
Sbjct: 229 QVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTY 288
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
+CGS+ A+ F +SS NV +W +++GY+ +G EA F ML++ + P + +
Sbjct: 289 FKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMM 348
Query: 504 GVLSACVRAGLVNEGMKIFR 523
G L AC G + G + R
Sbjct: 349 GALHACANLGDLERGRYVHR 368
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 144/316 (45%), Gaps = 41/316 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + +AR +F M R VVSWNTM+ GY++ + +E+ + M V+ + L
Sbjct: 292 GSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGAL 351
Query: 92 SVCAQLNSLIDGKQIHCLV--LKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
CA L L G+ +H L+ K G++ V + L+ Y+ C ++ A VF L
Sbjct: 352 HACANLGDLERGRYVHRLLDEKKIGFDV--SVMNSLISMYSKCKRVDIAASVFGNLKHKT 409
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M++GY Q +++A ++F +M D+
Sbjct: 410 VVTWNAMILGYAQNGCVNEALNLFCEMQSHDI---------------------------- 441
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P+ +T SVI A A L + K +HGL I+ + + + ALI+ + C A
Sbjct: 442 -----KPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAI 496
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGY 325
A +++D ++ + N++I+G + G +A +FN + + N I++ S+I
Sbjct: 497 QTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAAC 556
Query: 326 AVYGQVDDSKRLFEKM 341
+ G V++ FE M
Sbjct: 557 SHSGLVEEGMYYFESM 572
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
R ++L C+ L L Q L ++K F + T L+ ++ + SI +A F
Sbjct: 44 RHPSAILLELCTSLKELHQILPL---IIKNGFYNEHLFQTKLISLFCKFNSITEAARVFE 100
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
+ + ++ GY+ + +AV +E M +++P F +L L E
Sbjct: 101 PVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQ------LSGE 154
Query: 518 GMKIFRSMKSYGVVPT------LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
+ + R + +G+V T L T VV+L + + +A + + MP + D V W
Sbjct: 155 NLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP-QRDLVSWNT 213
Query: 572 LLSA 575
+++
Sbjct: 214 VVAG 217
>gi|359475162|ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Vitis vinifera]
Length = 670
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 204/657 (31%), Positives = 343/657 (52%), Gaps = 68/657 (10%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-ESLSLVSTMHRSN--VKLNETT 86
+ L AR LFD P + +V++N+ML GY ++ +L L M N +++E +
Sbjct: 66 KTQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETRIDEFS 125
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD--- 143
+ +L++ A+L+ GKQ+H ++K+ F S L+ Y+ C E +VFD
Sbjct: 126 LTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVCQVFDGCA 185
Query: 144 ---ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIK-MPKKDVVVWTKLISGYAKSVDGCE 199
+L N ++ + G ++ + ++F + + DVV W LISGY + +GCE
Sbjct: 186 GVLDLVSKNAMVAACCREGELEMGV-----NLFWRDLELNDVVSWNTLISGYVQ--NGCE 238
Query: 200 K-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+ ALKLF M E+ E NE+T ++ ACA L + GK VHG ++K F+ I
Sbjct: 239 EDALKLFVHMEEN-EVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSG 297
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
L++ YC C G ++ AEL++ + N+ S
Sbjct: 298 LVDVYCKC-------------------------------GNMKYAELVYATIGTGNAFSI 326
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
SMI G++ G + +++RLF+ + E++ + W ++ +GYV++
Sbjct: 327 TSMIVGHSSQGNMGEARRLFDSLT-----------------EKSSIIWTALFTGYVKSQQ 369
Query: 379 HEKALQLYMTMR-KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
E +L R K A+ + AC+ +L G+ +HA++++ E + + +
Sbjct: 370 CEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIGIELDEKLVS 429
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
++VDMYS+ G+I A+ F +++ + + + GY+HHG ++A+ FE MLE+ + P
Sbjct: 430 AMVDMYSKSGNIKYAEKIFQRVTNRDAVIYNIMTAGYAHHGHENQAIQQFEEMLERGVRP 489
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
+A TFV +LSAC GLV G K F SM Y ++P ++HY C++DL GR+ L +A F+
Sbjct: 490 DAVTFVALLSACRHCGLVELGEKYFASMTDYNILPEIDHYACMIDLYGRANQLEKAVAFM 549
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
K +PIE DAV+ GA L+AC N ++ A +K+ ++ + YV L+N+YA GKW
Sbjct: 550 KRIPIEPDAVILGAFLNACRINRNTKLAREAEEKILRIEGDNGARYVQLANVYAAEGKWV 609
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+ IR+++ E+KK GCSW+ + +RVH F+ D ++ + IY+ L LTA LN
Sbjct: 610 EMGRIRRKMRENEIKKFAGCSWVYVENRVHIFTSGDSSHSSAEAIYSILLILTAELN 666
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 144/607 (23%), Positives = 252/607 (41%), Gaps = 132/607 (21%)
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ S+ DG + H +K+G F + L+ Y+ + EA ++FDE+ E N W+ +
Sbjct: 1 MRSIKDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAI 60
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRE-SGEN 214
+ Y++ + A ++F P KD+V + ++SGY + DG E ALKLF M+ + E
Sbjct: 61 IWAYIKTQNLKQARELFDSAPSKDLVTYNSMLSGYINT-DGYETNALKLFIEMQSLNDET 119
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY--CG-----CE 267
+E++ ++ A+L GK +H ++K +LI+ Y CG C+
Sbjct: 120 RIDEFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVCQ 179
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS-ISYNSMIKGYA 326
FDG V D L + N+++ G +E +F R E N +S+N++I GY
Sbjct: 180 VFDGCAGVLD------LVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYV 233
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G +D+ +LF ME N V WN
Sbjct: 234 QNGCEEDALKLF------------------VHMEENEVRWN------------------- 256
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
T + L AC+ L SL+ G+ +H ++K N ++ + LVD+Y +C
Sbjct: 257 -----------EHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSGLVDVYCKC 305
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD------------ 494
G++ A+ +++I + N + T+++ G+S G EA LF+ + E+
Sbjct: 306 GNMKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTALFTGYV 365
Query: 495 --------------------IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
+VP+A + VL AC +N G +I + G+
Sbjct: 366 KSQQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIGIELDE 425
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIK----------------------------------DM 560
+ + +VD+ +SG++ AE+ + +
Sbjct: 426 KLVSAMVDMYSKSGNIKYAEKIFQRVTNRDAVIYNIMTAGYAHHGHENQAIQQFEEMLER 485
Query: 561 PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP-ISAYVILSNIYAVLGKWGKK 619
+ DAV + ALLSAC +E+GE+ M + P I Y + ++Y + K
Sbjct: 486 GVRPDAVTFVALLSACRHCGLVELGEKYFASMTDYNILPEIDHYACMIDLYGRANQLEKA 545
Query: 620 MDIRKRL 626
+ KR+
Sbjct: 546 VAFMKRI 552
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 202/681 (29%), Positives = 343/681 (50%), Gaps = 65/681 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNETTFSTI 90
G AR L D+MP R VS+N ++ YS+ + +ESL HR+ VK + T++
Sbjct: 61 GDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAA 120
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L+ C++ L +GK +H L + G FV + L+ YA C ++ EA+RV
Sbjct: 121 LAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRV--------- 171
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
FDV ++D V W L+SGY + V E+ L++F MR
Sbjct: 172 -------------------FDV---TEERDDVSWNSLVSGYLR-VGAHEEMLRVFALMRR 208
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEG--KVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ N + SVI+ C+ G + VHG ++K G + D + A+++ Y A
Sbjct: 209 CAMGL-NSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGA 267
Query: 269 FDGAMRVYDRLENPCLNASNSLINGL------ISMGRIEDAELIFNRLT----EANSISY 318
A+ ++ + +P + N++I GL + + +A +++ L E ++
Sbjct: 268 LSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTF 327
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------E 360
+S+I+ + G ++ K++ ++ + + S + ++ +
Sbjct: 328 SSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPK 387
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
++ VTW +MISG VQN L E+AL L+ + + + T S + +AC+ L ++ G+ +
Sbjct: 388 QDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQM 447
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
K+ F+ +G S + MY+R G++ A F + S +V +W+A+++ ++ HG
Sbjct: 448 QCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCA 507
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTC 539
+A+ F M+ +VPN TF+GVL+AC GLV+EG++ + MK YG+ PT++H TC
Sbjct: 508 RQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTC 567
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
VVDLLGR+G L +AE FI+D + VVW +LL +C +ME G+ A ++ L
Sbjct: 568 VVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPAS 627
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNC 659
YV L N+Y G+ IR + VKK+PG SWIEL S +H+F D+++P C
Sbjct: 628 SGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPEC 687
Query: 660 NVIYATLEHLTANLNSVVLFD 680
N IY L + + ++ + D
Sbjct: 688 NAIYTKLAEMLSKIDKLTTTD 708
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 238/538 (44%), Gaps = 58/538 (10%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N ++ R G + AR +FD R VSWN+++ GY + +E L + + M R +
Sbjct: 152 SNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAM 211
Query: 81 KLNETTFSTILSVCAQLNSLIDG--KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
LN +++ C+ + + G + +H V+K+G + F+ S ++ YA + EA
Sbjct: 212 GLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEA 271
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+F + + N ++++ M+ G L D V K+VV
Sbjct: 272 VALFKSVLDPNVVVFNAMIAG-----LCRDEAAV-----HKEVV---------------- 305
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+AL L+ ++ G P E+TF SVIRAC G GK +HG ++K F+ D+ IG A
Sbjct: 306 REALSLYSELQSRGME-PTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSA 364
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEAN 314
LI+ Y + R + + + ++I+G + E A +F+ L + +
Sbjct: 365 LIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPD 424
Query: 315 SISYNSMIKGYAVYGQVDDSKRL-----------FEKMPHRSII------SLNTMISVIP 357
+ +S++ A V +++ F M + I ++ I
Sbjct: 425 PFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQ 484
Query: 358 EME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
EME + V+W+++IS + Q+ +ALQ + M + TF + ACS G + +
Sbjct: 485 EMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDE 544
Query: 417 GQLLHAHLVKTPFE--SNVYVGTSLVDMYSRCGSINDAQASF-SSISSPNVAAWTALMNG 473
G L + ++K + V T +VD+ R G + DA+A SI W +L+
Sbjct: 545 G-LRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGS 603
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVP-NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
H L+ + ++E + P ++ +V + + + AG ++ G KI MK GV
Sbjct: 604 CRIHRDMERGQLVADRIME--LQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGV 659
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 5/175 (2%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS--FSSISS 461
L H SC SL Q +H H+ + ++++ +L+ Y R G+ + QA +
Sbjct: 17 LHHLRSC-ASLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPR 75
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
N ++ L++ YS G E++ F ++ + T+ L+AC RAG + EG
Sbjct: 76 RNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKV 135
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G+ + +V + R G + EA + D+ E D V W +L+S
Sbjct: 136 VHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARR-VFDVTEERDDVSWNSLVSG 189
>gi|51535392|dbj|BAD37262.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51535558|dbj|BAD37476.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 908
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 196/667 (29%), Positives = 344/667 (51%), Gaps = 40/667 (5%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+ L++ N+++ R G+ AR LFD +P R+VV+WN++L G ++ +
Sbjct: 33 DDLVMRHNRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDA 92
Query: 75 MH-RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M R V N T S + L +++ + + + + LL YA
Sbjct: 93 MPVRDAVSWN--TLLAAYSASPHPDHLAAARRLFDEMPQRDVVTW----NTLLGAYARRG 146
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++EA+R+FDE+ + N W+ M+ G+ + A DVF MP KD + ++SG+ K
Sbjct: 147 LMDEARRLFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTK 206
Query: 194 SVDGCEKALKLFRWMRESGENMPNEY-TFDSVIRACARLGAFCE----------GKVVHG 242
+G + R S +M ++++I A + G F + G+ H
Sbjct: 207 --NGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHN 264
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
+L + GFE + +++ Y A +++ + + L + N++I+G +++
Sbjct: 265 MLKRKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKE 324
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
+E +F + + +++S+N +I+G+ G+ + ++ F++MP R IS
Sbjct: 325 SEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTIS-------------- 370
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
WN+MISGY +N + +++L+ M ++ R TFS + AC+ + L G +H
Sbjct: 371 ---WNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPMLGLGAQIH- 426
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGYSHHGLGS 481
LV+ F + + +L+ MYSRCG++NDA+A F + + ++ +W AL+ Y HHG +
Sbjct: 427 QLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRAT 486
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCV 540
+A+ LF+ M ++P TFV +LSACV AGLV+EG +F +M YG+V +EHY +
Sbjct: 487 KALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAAL 546
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
V+L+GR G L +A E I MP+ D VWGA L AC N + + AA+++ ++
Sbjct: 547 VNLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGACTAKKNEPLAQMAAKELSTINPDSS 606
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
+ YV++ N++A GKWG +R+ + + K PG SWI+L ++H F D +PN
Sbjct: 607 APYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDLEGKMHVFISGDTWHPNAQ 666
Query: 661 VIYATLE 667
I++ LE
Sbjct: 667 EIFSVLE 673
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 314/622 (50%), Gaps = 60/622 (9%)
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
K IH ++++ F+ + ++ YA A+RVFD + + N W+ +L+ Y +
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKS--VDGCEKALKLFRWMRESGENMPNEYTF 221
L+S+ F K+P +D V W LI GY+ S V KA MR+ N+ T
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM--MRDFSANL-TRVTL 142
Query: 222 DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
++++ + G GK +HG +IK GFE +G L+ Y A +V+ L++
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
NSL+ GL++ G IEDA +F R E +S+S+ +MIKG A G ++ F +M
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 342 ----------PHRSIISLNTMISVIPE--------------------------------- 358
P S++ + I E
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 359 ----------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
++N V+W +M+ GY Q E+A+++++ M++ ID T AC
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ + SL++G H + + V V SLV +Y +CG I+D+ F+ ++ + +WT
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS- 527
A+++ Y+ G E + LF+ M++ + P+ T GV+SAC RAGLV +G + F+ M S
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
YG+VP++ HY+C++DL RSG L EA FI MP DA+ W LLSAC N+E+G+
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKW 561
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVH 647
AA+ + LD + Y +LS+IYA GKW +R+ + VKK+PG SWI+ ++H
Sbjct: 562 AAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLH 621
Query: 648 AFSVEDRNNPNCNVIYATLEHL 669
+FS +D ++P + IYA LE L
Sbjct: 622 SFSADDESSPYLDQIYAKLEEL 643
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 245/519 (47%), Gaps = 67/519 (12%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
YA + + Q L S N + + G + + F+++P R V+WN ++ GYS
Sbjct: 59 YARRVFDRIPQPNLF-SWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSG 117
Query: 64 KFDESLSLVSTMHRS-NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
++ +TM R + L T T+L + + + GKQIH V+K G+E + VG
Sbjct: 118 LVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVG 177
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
S LL+ YAN I +AK+VF L + N ++++ ++ G + C ++ DA +F M +KD V
Sbjct: 178 SPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSV 236
Query: 183 VWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
W +I G A+ +G K A++ FR M+ G M ++Y F SV+ AC LGA EGK +H
Sbjct: 237 SWAAMIKGLAQ--NGLAKEAIECFREMKVQGLKM-DQYPFGSVLPACGGLGAINEGKQIH 293
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
+I+ F+ +G ALI+ YC C+ A V+DR++ + + +++ G GR E
Sbjct: 294 ACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE 353
Query: 302 DAELIF----------NRLTEANSISY-----------------------------NSMI 322
+A IF + T +IS NS++
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
Y G +DDS RLF +M R+ V+W +M+S Y Q +
Sbjct: 414 TLYGKCGDIDDSTRLFNEMN-----------------VRDAVSWTAMVSAYAQFGRAVET 456
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG--TSLV 440
+QL+ M + + T + + ACS G +++GQ + L+ + + +G + ++
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ-RYFKLMTSEYGIVPSIGHYSCMI 515
Query: 441 DMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
D++SR G + +A + + P+ WT L++ + G
Sbjct: 516 DLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 12/209 (5%)
Query: 401 FSVLFHACSCLGSLQQG---QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
+SV C LG+ Q +++H ++++ ++ ++V Y+ S A+ F
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
I PN+ +W L+ YS GL SE FE + ++D V T+ ++ +GLV
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGV----TWNVLIEGYSLSGLVGA 121
Query: 518 GMKIFRS-MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+K + + M+ + T ++ L +GH+ ++ I I+L + L+ +
Sbjct: 122 AVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQ-IHGQVIKLGFESY-LLVGSP 179
Query: 577 WFWMNMEVG--ERAAQKMFGLDKKPISAY 603
+M VG A + +GLD + Y
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMY 208
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 210/695 (30%), Positives = 332/695 (47%), Gaps = 58/695 (8%)
Query: 5 ATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK 64
A +Q + + + + N + + +L A+ +F+++ + VVSWN ++ GYS+
Sbjct: 27 ALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGP 86
Query: 65 FDES--LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
S + L M N N TF+ + + + L G+ H + +K FVG
Sbjct: 87 SGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVG 146
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
S L+ Y EA++VFD MP+++ V
Sbjct: 147 SSLMNMYCKAGLTPEARKVFD-------------------------------TMPERNSV 175
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W +ISGYA E AL LFR MR E NE+ F SV+ A GK +H
Sbjct: 176 SWATMISGYASQKLAAE-ALGLFRLMRREEEG-ENEFVFTSVLSALTLPELVNNGKQIHC 233
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
+ +K G S+G AL+ Y C + D A++ ++ + +++I G G +
Sbjct: 234 IAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDK 293
Query: 303 AELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE 358
A +F+ + + ++ +I + G + K++ + + S +++ + +
Sbjct: 294 ALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVD 353
Query: 359 M------------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
M E + V W SMI GYVQN +E AL LY M I T
Sbjct: 354 MYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELT 413
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ + ACS L +L+QG+ +HA VK F V +G++L MY++CG + D F +
Sbjct: 414 MASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMP 473
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ +V +W A+++G S +G G EA+ LFE M + P+ TFV +LSAC GLV G
Sbjct: 474 ARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWG 533
Query: 521 IFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
FR M +G+ P +EHY C+VD+L R+G L EA EF + I+ +W +L AC +
Sbjct: 534 YFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNY 593
Query: 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSW 639
N E+G A +K+ L + SAYV+LS+IY+ LG+W +R+ + V K+PGCSW
Sbjct: 594 RNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSW 653
Query: 640 IELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
IEL S VH F V+D+ +P I+ L L+ +
Sbjct: 654 IELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMK 688
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 17/192 (8%)
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+ + RS F+ L SLQ+G+ LHA ++K+ S VY+ SLV++Y++C + +
Sbjct: 1 MTLPSNRSFFTALLQYTHNR-SLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLRE 58
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGL-GSEAVL-LFEIMLEQDIVPNAATFVGVLSAC 509
A+ F I + +V +W ++NGYS HG GS V+ LF+ M ++ PNA TF GV +A
Sbjct: 59 AKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAA 118
Query: 510 -----VRAGLVNEGMKI-FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
G + + I S + V +L + C ++G EA + MP E
Sbjct: 119 STLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYC------KAGLTPEARKVFDTMP-E 171
Query: 564 LDAVVWGALLSA 575
++V W ++S
Sbjct: 172 RNSVSWATMISG 183
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 293/529 (55%), Gaps = 24/529 (4%)
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
M +A VF ++P+ + +W + GY+++ + + + LFR M+ + MPN +TF ++
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQN-ESHKDVIVLFRQMK-GLDVMPNCFTFPVIL 58
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
++C ++ A EG+ VH +IK GF + + LI+ Y A A RV+ + +
Sbjct: 59 KSCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVI 118
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
A ++ING I+ + A +F+ E + + +N+MI GY V ++ LF+KMP++
Sbjct: 119 AWTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKD 178
Query: 346 IISLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
++S NT+++ + EM ERN +WN++I GY +N + L + ++
Sbjct: 179 VMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAF---KR 235
Query: 392 LAIDRT----RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
+ +D T +T + AC+ LG+L G+ +H + ++ NVYV +L+DMY++CG
Sbjct: 236 MLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCG 295
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
+ A F S+ + ++ +W ++ G + HG G++A+ LF M P+ TF+G+L
Sbjct: 296 VVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILC 355
Query: 508 ACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
AC GLV +G F+SM Y +VP +EHY C+VDLLGR+G L A +FI+ MPIE DA
Sbjct: 356 ACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADA 415
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
V+W ALL AC + N+E+ E A +K+ + K + YV+LSNIY G+W ++ +
Sbjct: 416 VIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAM 475
Query: 627 THLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
KK PGCS IE+N + F D +P IY TL LT L S
Sbjct: 476 RDTGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLLRS 524
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 200/455 (43%), Gaps = 80/455 (17%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +FDQ+P WN M GYS+ + + L M +V N TF IL C +
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVK 63
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+N+L +G+++HC V+KSG+ FV + L+ YA+ I A RVF E+ E N + W+ M
Sbjct: 64 INALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAM 123
Query: 157 LVGYVQC---------------------NLMSDAF----------DVFIKMPKKDVVVWT 185
+ GY+ C N M + ++F KMP KDV+ W
Sbjct: 124 INGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWN 183
Query: 186 KLISGYAKSVD--GCEK----------------------------ALKLFRWMRESGENM 215
+++GYA + D CE+ L F+ M G +
Sbjct: 184 TVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVV 243
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN+ T +V+ ACARLGA GK VH G++ + + AL++ Y C + A+ V
Sbjct: 244 PNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDV 303
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQV 331
+ ++N L + N++I GL G DA +F+ + A + I++ ++ G V
Sbjct: 304 FKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLV 363
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
+D F+ S+ S++P +E + ++ + L A+ +RK
Sbjct: 364 EDGFSYFK--------SMTDDYSIVPRIEH----YGCIVDLLGRAGLLAHAVDF---IRK 408
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+ I+ ++ L AC +++ +L L++
Sbjct: 409 MPIEADAVIWAALLGACRVYKNVELAELALEKLIE 443
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 162/400 (40%), Gaps = 85/400 (21%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH- 76
++S N + NG ++ LF++MP R V SWN ++ GY++ F E LS M
Sbjct: 179 VMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLV 238
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
V N+ T +LS CA+L +L GK +H GY+ +V + L+ YA C +E
Sbjct: 239 DGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVE 298
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A DVF M KD++ W +I G A
Sbjct: 299 T-------------------------------ALDVFKSMDNKDLISWNTIIGGLAVHGH 327
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF----- 251
G + AL LF M+ +GEN P+ TF ++ AC +G L++ GF +
Sbjct: 328 GAD-ALNLFSHMKIAGEN-PDGITFIGILCACTHMG-----------LVEDGFSYFKSMT 374
Query: 252 -DESIGGALIEFYCGCEAFDGA---MRVYDRLENPCLNASNSLINGLISMGR----IEDA 303
D SI + + C + A D + + A + L+ R +E A
Sbjct: 375 DDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGACRVYKNVELA 434
Query: 304 ELIFNRLTE---ANSISYNSMIKGYAVYGQVDDSKRL--------FEKMPHRSIISLNTM 352
EL +L E N +Y + Y +G+ D RL F+K+P S+I +N
Sbjct: 435 ELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFKKLPGCSLIEVN-- 492
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+ ++ Y + H + Q+Y T+R L
Sbjct: 493 --------------DYLVEFYSLDERHPEKEQIYGTLRTL 518
>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 681
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 198/628 (31%), Positives = 312/628 (49%), Gaps = 58/628 (9%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N I+ + G+L A+ LF++MP R V+WN+M+ GY++ E++ L ++ +
Sbjct: 106 SWNVVISGFAKAGELDVAKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKELNSNP 165
Query: 80 VKL---NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
++ + ++++ CA L ++ GKQ+H +L E + S L+ YA C ++
Sbjct: 166 LEKSCGDTFVLASVIGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLD 225
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A V + E ++ S +++GY C MSDA +F VVW LISGY +
Sbjct: 226 TANYVLKMMDEVDDFSLSALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNN-- 283
Query: 197 GCEKALKLFRWMRESGEN--MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ +K F + E N + T ++ AC+ G K +HG + K G
Sbjct: 284 --HEEMKAFALVNEMKNNRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVI 341
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+ A I+ Y C NP DA +F+ L +
Sbjct: 342 VASAFIDAYSKCR-------------NP------------------NDACKLFSELKAYD 370
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
++ NSMI Y G++ D+K +FE MP +S+IS WNS+I G
Sbjct: 371 TVLLNSMITAYCNCGRIRDAKNIFETMPSKSLIS-----------------WNSIIVGLA 413
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
QN +AL ++ M KL + R + + + AC+C+ SL+ G+ + A + T ES+
Sbjct: 414 QNAYPLEALDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESDQA 473
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
V TSLVD Y +CG I + + F S+ + +W +++ GY+ +G G E + LF M +
Sbjct: 474 VSTSLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQAG 533
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEA 553
+ P TF GVLSAC GLV EG K F MK Y + P +EHY+C+VDL R+G L EA
Sbjct: 534 LRPTDITFTGVLSACDHCGLVEEGRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEA 593
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
++ MP E D +W ++L C + ++G++ AQ++ L+ + SAYV LS I+A
Sbjct: 594 LNLVEHMPFEADCSMWSSVLRGCVAHGDKDLGKKVAQQIIQLNPESSSAYVQLSGIFATS 653
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
G W +RK +T +VKK PG SW +
Sbjct: 654 GDWESSALVRKIMTEKQVKKHPGFSWAD 681
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 132/544 (24%), Positives = 225/544 (41%), Gaps = 120/544 (22%)
Query: 98 NSLIDGKQIHCLVLKSGY-ECFEFVGSGLLFFYANCF-EIEEAKRVFDELHEDNELLWSL 155
+S+ GKQ+H L LK G + + LL YA C + +A +FDE+ E N W+
Sbjct: 19 SSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHNLFDEMPERNCFSWNT 78
Query: 156 MLVGYVQC----------NLMSDAFD---------------------VFIKMPKKDVVVW 184
M+ GY++ +LM D +F +MP+++ V W
Sbjct: 79 MIEGYMRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGELDVAKKLFNEMPRRNGVAW 138
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESG--ENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
+I GYA++ +A+ LF+ + + ++ + + SVI ACA LGA GK VH
Sbjct: 139 NSMIHGYARN-GFAREAVGLFKELNSNPLEKSCGDTFVLASVIGACADLGAIEYGKQVHA 197
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
++ E D + +LI Y C G ++
Sbjct: 198 RILMDDVELDSVLISSLINLYAKC-------------------------------GHLDT 226
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
A + + E + S +++I GYA G++ D+ R+F + N
Sbjct: 227 ANYVLKMMDEVDDFSLSALIMGYANCGRMSDAVRIFRT-------------------KSN 267
Query: 363 P--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
P V WNS+ISGYV N+ KA L M+ + ST +V+ ACS G+ Q + +
Sbjct: 268 PCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVILSACSSTGNAQYAKQM 327
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSR-------------------------------CGSI 449
H ++ K +V V ++ +D YS+ CG I
Sbjct: 328 HGYVCKVGLIDSVIVASAFIDAYSKCRNPNDACKLFSELKAYDTVLLNSMITAYCNCGRI 387
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
DA+ F ++ S ++ +W +++ G + + EA+ +F M + D+ + + V+SAC
Sbjct: 388 RDAKNIFETMPSKSLISWNSIIVGLAQNAYPLEALDVFGKMNKLDLRMDRFSLASVISAC 447
Query: 510 VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
+ G ++F G+ T +VD + G + + M I+ D V W
Sbjct: 448 ACISSLELGEQVFARAIITGLESDQAVSTSLVDFYCKCGFIENGRKLFDSM-IKTDEVSW 506
Query: 570 GALL 573
++L
Sbjct: 507 NSML 510
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 179/397 (45%), Gaps = 61/397 (15%)
Query: 222 DSVIRACARL-------GAFCEGKVVHGLLIKCGF-EFDESIGGALIEFYCGCEA-FDGA 272
D +R+ ARL + +GK +H L +K G S+ L++ Y C A
Sbjct: 2 DLELRSLARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDA 61
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD 332
++D + + N++I G + +G E + +F+ + + N S+N +I G+A G++D
Sbjct: 62 HNLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGELD 121
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+K+LF +MP RN V WNSMI GY +N +A+ L+ +
Sbjct: 122 VAKKLFNEMP-----------------RRNGVAWNSMIHGYARNGFAREAVGLFKELNSN 164
Query: 393 AIDRTRSTFSVL---FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
++++ VL AC+ LG+++ G+ +HA ++ E + + +SL+++Y++CG +
Sbjct: 165 PLEKSCGDTFVLASVIGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHL 224
Query: 450 N-------------------------------DAQASFSSISSPNVAAWTALMNGYSHHG 478
+ DA F + S+P W +L++GY ++
Sbjct: 225 DTANYVLKMMDEVDDFSLSALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNH 284
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
+A L M + +++T +LSAC G ++ + G++ ++ +
Sbjct: 285 EEMKAFALVNEMKNNRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVAS 344
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+D + + ++A + ++ D V+ ++++A
Sbjct: 345 AFIDAYSKCRNPNDACKLFSELK-AYDTVLLNSMITA 380
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 106/231 (45%), Gaps = 19/231 (8%)
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCG-SIND 451
+D + + L + + S+ QG+ LH +K + V + L+ MY+RCG ++ D
Sbjct: 1 MDLELRSLARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTD 60
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A F + N +W ++ GY G ++ LF++M ++ N ++ V+S +
Sbjct: 61 AHNLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQK----NDYSWNVVISGFAK 116
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM---PIEL---D 565
AG ++ K+F M V + ++ R+G EA K++ P+E D
Sbjct: 117 AGELDVAKKLFNEMPRRNGVA----WNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGD 172
Query: 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI--LSNIYAVLG 614
V +++ AC +E G++ ++ +D + + +I L N+YA G
Sbjct: 173 TFVLASVIGACADLGAIEYGKQVHARIL-MDDVELDSVLISSLINLYAKCG 222
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 203/675 (30%), Positives = 348/675 (51%), Gaps = 59/675 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V+++ + + G V +L M R VSW +++ + + + ++L L S+M R
Sbjct: 70 LVASSSSSPDAQLAGNTVLGNHLI-TMYGRNPVSWASVIAAHVQNGRAGDALGLFSSMLR 128
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S ++ + + C +L + G+Q+H LKS GS L+
Sbjct: 129 SGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSER------GSDLI----------- 171
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+ + ++ Y + L+ D F +F ++ KD++ W +I+G+A+ G
Sbjct: 172 --------------VQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQ--G 215
Query: 198 CE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E +AL++FR M G + PNE+ F S RAC +G++ G+ +HGL IK + D +G
Sbjct: 216 FEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVG 275
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA--- 313
+L + Y C+ D A + R+E P L + NS++N G + +A ++F+ + ++
Sbjct: 276 CSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLR 335
Query: 314 ----------------NSISYNSMIKGYAVYGQVDDSKRLFEKM--PHRSIISLNTMISV 355
+++ + +I Y V +D + + + L++ + V
Sbjct: 336 PDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDV 395
Query: 356 IPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
E+ +++ VTWNS+++ Q+N E+ L+L+ + K R + + + A + LG
Sbjct: 396 FHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYF 455
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNG 473
+ + +HA+ K + + +L+D Y++CGS++DA F + ++ +V +W++L+ G
Sbjct: 456 EMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVG 515
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVP 532
Y+ G EA LF M I PN TF+GVL+AC R G VNEG + M+ YG+VP
Sbjct: 516 YAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVP 575
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
T EH +C+VDLL R+G L EA FI MP E D ++W LL+A +ME+G+RAA+ +
Sbjct: 576 TREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGI 635
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
+D +AYV+L NIYA G W + ++K + VKK PG SW++L + F VE
Sbjct: 636 LNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVE 695
Query: 653 DRNNPNCNVIYATLE 667
DR++P IYA LE
Sbjct: 696 DRSHPESEEIYAMLE 710
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 24/128 (18%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFES-------NVYVGTSLVDMYSRCGSINDAQ 453
++ L ACS L SL QG+ +H HLV + S N +G L+ MY R
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGR-------- 98
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
N +W +++ + +G +A+ LF ML + + AC G
Sbjct: 99 ---------NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149
Query: 514 LVNEGMKI 521
V G ++
Sbjct: 150 DVGTGRQV 157
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 183/492 (37%), Positives = 273/492 (55%), Gaps = 51/492 (10%)
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
VF + D +W +I G++ S D E++L L++ M S N YTF S+++AC+ L
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCS-DEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACSNL 128
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
AF E +H + K G+E D VY A NSLI
Sbjct: 129 SAFEETTQIHAQITKLGYEND----------------------VY---------AVNSLI 157
Query: 292 NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
N G + A L+F+R+ E + +S+NS+IKGY G++D + LF KM
Sbjct: 158 NSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA--------- 208
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
E+N ++W +MISGYVQ +++++ALQL+ M+ ++ + + AC+ L
Sbjct: 209 --------EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
G+L+QG+ +H++L KT + +G L+DMY++CG + +A F +I +V AWTAL+
Sbjct: 261 GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALI 320
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGV 530
+GY++HG G EA+ F M + I PN TF VL+AC GLV EG IF SM + Y +
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
PT+EHY C+VDLLGR+G L EA+ FI++MP++ +AV+WGALL AC N+E+GE +
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGE 440
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
+ +D YV +NI+A+ KW K + R+ + V K PGCS I L H F
Sbjct: 441 ILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFL 500
Query: 651 VEDRNNPNCNVI 662
DR++P I
Sbjct: 501 AGDRSHPEIEKI 512
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 159/312 (50%), Gaps = 6/312 (1%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A+ +FD WN M+ G+S + + SL L M S+ N TF ++L
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
C+ L++ + QIH + K GYE + + L+ YA + A +FD + E +++ W
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++ GYV+ M A +F KM +K+ + WT +ISGY ++ D ++AL+LF M+ S +
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQA-DMNKEALQLFHEMQNS-D 242
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+ + + + ACA+LGA +GK +H L K D +G LI+ Y C + A+
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYG 329
V+ ++ + A +LI+G G +A F + + N I++ +++ + G
Sbjct: 303 EVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 330 QVDDSKRLFEKM 341
V++ K +F M
Sbjct: 363 LVEEGKLIFYSM 374
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 24/264 (9%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N I + G++ A LF +M + +SW TM+ GY + E+L L M S
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS 241
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+V+ + + + LS CAQL +L GK IH + K+ +G L+ YA C E+EEA
Sbjct: 242 DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKS 194
VF + + + W+ ++ GY +A F++M K +V+ +T +++ A S
Sbjct: 302 LEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLT--ACS 359
Query: 195 VDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGK------------VVH 241
G + KL + E N+ P + ++ R G E K V+
Sbjct: 360 YTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 419
Query: 242 GLLIKC-----GFEFDESIGGALI 260
G L+K E E IG LI
Sbjct: 420 GALLKACRIHKNIELGEEIGEILI 443
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 7/178 (3%)
Query: 404 LFHACSCLGSLQQGQLL---HAHLVKTPFESNVYVGTSLVDMYSRCGS---INDAQASFS 457
L+ SCL + + L HA ++KT + Y T + S + AQ F
Sbjct: 14 LYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFD 73
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
P+ W ++ G+S ++LL++ ML NA TF +L AC E
Sbjct: 74 GFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEE 133
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+I + G + +++ +G+ A +P E D V W +++
Sbjct: 134 TTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP-EPDDVSWNSVIKG 190
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/461 (36%), Positives = 260/461 (56%), Gaps = 49/461 (10%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN++T +V++ACA + + +GK H +IK GFE D + AL+ Y C
Sbjct: 8 PNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARC--------- 58
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
G +EDA +F++++E ++ ++N+MI G+A + +
Sbjct: 59 ----------------------GSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKAL 96
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
+LF +M ER+ V+W ++I+GY QN +++L ++ MRK +
Sbjct: 97 KLFYEMS-----------------ERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMK 139
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
R + AC+ L +L+ G+ HA++V++ F ++ VG++LVDMY++ GS+ DA
Sbjct: 140 SDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQV 199
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F + N +W +++ G + HG G++AVLLFE ML+ I PN +FVGVLSAC GLV
Sbjct: 200 FDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLV 259
Query: 516 NEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
NEG F M ++YG+VP + HYTC++DLLGR+G L EAE FI MP+E D VWGALL
Sbjct: 260 NEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLG 319
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
AC N E+ +R A+ + G++ + YV+LSNIYA G+W +RK + V K
Sbjct: 320 ACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQ 379
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
PG SWIE+ + +HAF + ++P I+ LE L+ + +
Sbjct: 380 PGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKA 420
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 191/378 (50%), Gaps = 24/378 (6%)
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
VK N+ T ST++ CA + SL GKQ H ++K G+E V + L+ YA C +E+A
Sbjct: 6 VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VFD++ E + W+ M+ G+ Q M A +F +M ++DVV WT +I+GYA++ G +
Sbjct: 66 HVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG-D 124
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
++L +F MR++G + + SV+ ACA L A G+ H +++ GF D +G AL
Sbjct: 125 ESLNVFNQMRKTGMK-SDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NS 315
++ Y + + A +V+D++ + NS+I G GR DA L+F ++ +A N
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNE 243
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
IS+ ++ + G V++ + F M ++P++ + MI +
Sbjct: 244 ISFVGVLSACSHTGLVNEGRGYFNLMTQN--------YGIVPDVSH----YTCMIDLLGR 291
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE-SNVY 434
++A + + ++ S + L AC G+ + + + HL+ + + +Y
Sbjct: 292 AGCLDEAENF---INGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIY 348
Query: 435 VGTSLVDMYSRCGSINDA 452
V L ++Y+ G +DA
Sbjct: 349 V--LLSNIYAAAGQWDDA 364
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 149/346 (43%), Gaps = 68/346 (19%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N IT +N + A LF +M R VVSW ++ GY++ DESL++ + M ++ +K
Sbjct: 80 NAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMK 139
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ ++LS CA L +L G+Q H V++SG+ VGS L+ YA +E+A +V
Sbjct: 140 SDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQV 199
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD++ + NE+ W+ ++ G Q +D A
Sbjct: 200 FDKMPQRNEVSWNSIITGCAQHGRGND--------------------------------A 227
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+ LF M ++G PNE +F V+ AC+ G EG+ L+ + + I +
Sbjct: 228 VLLFEQMLQAGIK-PNEISFVGVLSACSHTGLVNEGRGYFNLMTQ-----NYGIVPDVSH 281
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLING------------LISMGRIEDAELIFNR 309
+ C + A CL+ + + ING L+ RI + R
Sbjct: 282 YTCMIDLLGRA---------GCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKR 332
Query: 310 LTEANSISYNSMIKG--------YAVYGQVDDSKRLFEKMPHRSII 347
+ E + + I G YA GQ DD+ ++ + M R ++
Sbjct: 333 IAE-HLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVM 377
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/482 (36%), Positives = 274/482 (56%), Gaps = 20/482 (4%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A +F ++P + +W +I YA S E AL +F M + +P++YTF +++C
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTP-EAALTIFHQMLHASV-LPDKYTFTFALKSC 118
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
EG+ +HG ++K G D I LI Y C + A + DR+ + + N
Sbjct: 119 GSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWN 178
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
+L++ G +E A +F+ +TE N S+N MI GY G +++++R+F + P
Sbjct: 179 ALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETP------ 232
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
+N V+WN+MI+GY + L L+ M+ + T + AC
Sbjct: 233 -----------VKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSAC 281
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ +G+L QG+ +HA++ K + +V T+LVDMYS+CGSI A F+S +++ W
Sbjct: 282 AHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWN 341
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KS 527
++++G S HG G A+ +F ML + PN TFV VLSAC RAGL++EG ++F M
Sbjct: 342 SIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHV 401
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
+G+ PT+EHY C+VDLLGR G L EAEE ++ MP + +VVW +LL AC N+E+ ER
Sbjct: 402 HGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAER 461
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVH 647
AQK+ L + S++V LSN+YA +G+W M++R+++ V+KDPGCS IE++ V+
Sbjct: 462 VAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVY 521
Query: 648 AF 649
F
Sbjct: 522 EF 523
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 214/451 (47%), Gaps = 55/451 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A ++F ++P WNT++ Y+ + +L++ M ++V ++ TF+ L C
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGS 120
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK----------------- 139
+ + +G+QIH VLK+G F+ + L+ YA+C IE+A+
Sbjct: 121 FSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNAL 180
Query: 140 --------------RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
+FDE+ E N W+ M+ GYV L+ +A VF + P K+VV W
Sbjct: 181 LSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWN 240
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
+I+GY+ + E L LF M+ +G P+ T SV+ ACA +GA +G+ VH +
Sbjct: 241 AMITGYSHAGRFSE-VLVLFEDMQHAGVK-PDNCTLVSVLSACAHVGALSQGEWVHAYID 298
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
K G D + AL++ Y C + + A+ V++ ++ NS+I+GL + G + A
Sbjct: 299 KNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQ 358
Query: 306 IFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
IF+ + + N +++ ++ + G +D+ + +F M H + + P +E
Sbjct: 359 IFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVH--------VHGIQPTIEH 410
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ M+ + L E+A +L ++K+ + L AC G+++ + +
Sbjct: 411 ----YGCMVDLLGRVGLLEEAEEL---VQKMPQKEASVVWESLLGACRNHGNVELAERVA 463
Query: 422 AHLVK-TPFESNVYVGTSLVDMYSRCGSIND 451
L++ +P ES+ +V L +MY+ G D
Sbjct: 464 QKLLELSPQESSSFV--QLSNMYASMGRWKD 492
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 142/317 (44%), Gaps = 42/317 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +F + P++ VVSWN M+ GYS +F E L L M + VK + T ++L
Sbjct: 219 GLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVL 278
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S CA + +L G+ +H + K+G FV + L+ Y+ C IE+A VF N
Sbjct: 279 SACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVF------NSC 332
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
L +KD+ W +ISG + G + AL++F M
Sbjct: 333 L-------------------------RKDISTWNSIISGLSTHGSG-QHALQIFSEMLVE 366
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC-GFEFDESIGGALIEFYCGCEAFD 270
G PNE TF V+ AC+R G EG+ + L++ G + G +++ +
Sbjct: 367 GFK-PNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLE 425
Query: 271 GAMRVYDRLENPCLNAS---NSLINGLISMGRIEDAELIFNRLTE---ANSISYNSMIKG 324
A + ++ P AS SL+ + G +E AE + +L E S S+ +
Sbjct: 426 EAEELVQKM--PQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNM 483
Query: 325 YAVYGQVDDSKRLFEKM 341
YA G+ D + +KM
Sbjct: 484 YASMGRWKDVMEVRQKM 500
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSL---VDMYSRCGSINDAQASFSSISSPNVAAWTA 469
S+ + HAH++K+ + + + L V S +I A + FS I +PN W
Sbjct: 19 SISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNT 78
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
++ Y++ A+ +F ML ++P+ TF L +C V EG +I + G
Sbjct: 79 IIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTG 138
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ L ++ L G + +A + M +E D V W ALLSA
Sbjct: 139 LGDDLFIQNTLIHLYASCGCIEDARHLLDRM-LERDVVSWNALLSA 183
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 209/666 (31%), Positives = 343/666 (51%), Gaps = 66/666 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR LFD MP R +VS+ T++ GY+ F+E+ L + R ++N +TIL
Sbjct: 98 GPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTIL 157
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
V +++ IH K G++ FVGS L+ Y+
Sbjct: 158 KVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYS--------------------- 196
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
C +S A VF + KD V WT ++S Y+++ D E AL F MR +
Sbjct: 197 ----------LCGAVSHARCVFDGIIWKDAVTWTAMVSCYSEN-DIPEDALNTFSKMRMA 245
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PN + SV++A L + GK +HG +K + + +GGAL++ Y C +
Sbjct: 246 GAK-PNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIED 304
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAV 327
A V++ + + + + LI+ + E A +F R+ + N S + +++ A
Sbjct: 305 ARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACAN 364
Query: 328 YGQVDDSKRLFEKMPHRSIISL---------NTMISVIPE--------------MERNPV 364
+D +++ H +I L N ++ V + + N V
Sbjct: 365 VAFLDLGQQI-----HNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEV 419
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+WN++I GY Q+ E AL ++ MR + T+ TFS + AC+ S++ +H+ +
Sbjct: 420 SWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLI 479
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
K+ F ++ V SL+D Y++CG I DA F SI +V +W A+++GY+ HG ++A+
Sbjct: 480 EKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDAL 539
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDL 543
LF M + D PN TFV +LS C GLVN+G+ +F SM + + P+++HYTC+V L
Sbjct: 540 ELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRL 599
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
LGR+G L++A +FI D+P +VW ALLS+C N+ +G+ +A+K+ ++ + + Y
Sbjct: 600 LGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTY 659
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
V+LSN+YA G + +RK + ++ VKK+ G SW+E+ VHAFSV ++P+ +I
Sbjct: 660 VLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIIN 719
Query: 664 ATLEHL 669
A LE L
Sbjct: 720 AMLEWL 725
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/540 (21%), Positives = 225/540 (41%), Gaps = 100/540 (18%)
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG--YECFEFVGSGLLFFYANCFEIEEA 138
KL+ + +L C G+ +H V++ G + F + LL YA + A
Sbjct: 44 KLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAA 103
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+R+FD MP++++V + L+ GYA G
Sbjct: 104 RRLFD-------------------------------GMPERNMVSFVTLVQGYALR-GGF 131
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
E+A LFR ++ G + N + ++++ + A +H K G + + +G +
Sbjct: 132 EEAAGLFRRLQREGHEV-NHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSS 190
Query: 259 LIEFYCGCEAFDGAMRVYDRL----------------ENPCLNASNSLINGLISMGRIED 302
LI+ Y C A A V+D + EN + + + + G +
Sbjct: 191 LIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPN 250
Query: 303 AELIFNRLTEANSISYNSMIKG-----------------------YAVYGQVDDSKRLFE 339
++ + L A +S + KG YA G ++D++ +FE
Sbjct: 251 PFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFE 310
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+PH +I W+ +IS Y Q+ +E+A ++++ M + ++
Sbjct: 311 IIPHDDVI-----------------LWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEF 353
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+ S + AC+ + L GQ +H ++K +ES ++VG +L+D+Y++C ++ ++ F S+
Sbjct: 354 SLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSL 413
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
N +W ++ GY G +A+ +F+ M ++ TF VL AC + +
Sbjct: 414 RDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTV 473
Query: 520 KIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+I ++ T + T V +D + G + +A + + + I+ D V W A++S
Sbjct: 474 QIHSLIEK----STFNNDTIVCNSLIDTYAKCGCIRDALKVFESI-IQCDVVSWNAIISG 528
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 4 YATQSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+ Q +L+ + T + N I + G + A +F+ + VVSWN ++ GY+
Sbjct: 471 HTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYA 530
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+ ++L L + M++S+ K N+ TF +LSVC
Sbjct: 531 LHGRATDALELFNRMNKSDTKPNDVTFVALLSVCG 565
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 202/657 (30%), Positives = 328/657 (49%), Gaps = 58/657 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A+N+F Q+ + WN M+ G++ +FD +L M ++ TF ++
Sbjct: 95 GAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVI 154
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C LNS+ G+ +H + G+E FVGS L+ FY+ I +A+ +FD
Sbjct: 155 KACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFD-------- 206
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+MP KD V+W +++GY K+ D + A +F MR +
Sbjct: 207 -----------------------RMPSKDGVLWNVMLNGYVKNGD-WDNATGVFMEMRRT 242
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG--ALIEFYCGCEAF 269
E PN TF V+ CA G +HGL++ G E D + ALI+ Y C
Sbjct: 243 -ETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDV 301
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGY 325
+ A +++D+ + ++I+G + G +A IF L + ANS++ S++
Sbjct: 302 EMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPAC 361
Query: 326 AVYGQVDDSKRLFE---KMPHRSIISLNTMI---------------SVIPEMERNPVTWN 367
A + K L K H + + I + I +++ V WN
Sbjct: 362 AGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWN 421
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
SMI+ QN E+A+ L+ M + S AC+ L +L G+ +HA +++
Sbjct: 422 SMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG 481
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F S+++ ++L+DMYS+CG+++ A F ++ N +W +++ Y +HG +++ LF
Sbjct: 482 AFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLF 541
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
ML I P+ TF+ ++SAC AG V+EG+ FR M + G++ +EHY C+VDL GR
Sbjct: 542 HGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGR 601
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G L+EA I MP DA VWG LL AC N+E+ E A++ +F LD + YV+L
Sbjct: 602 AGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLL 661
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
SN++A G+W + IR + V+K PGCSWI++N+ H F DR++P + IY
Sbjct: 662 SNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIY 718
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 225/515 (43%), Gaps = 66/515 (12%)
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+IL C + L G+Q H +L +G +G+ LL Y C +AK +F +L
Sbjct: 51 SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
W+ M+ G+ A + KM GC
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKML-------------------GC---------- 141
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+P++YTF VI+AC L + G+VVH + GFE D +G +LI+FY
Sbjct: 142 ----GTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGC 197
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK- 323
A ++DR+ + N ++NG + G ++A +F + T NS+++ ++
Sbjct: 198 IHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSV 257
Query: 324 ---------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNP--- 363
G ++G V S + P + +L + ++E R P
Sbjct: 258 CASEIMINFGSQLHGLVVSSGLEMDS-PVANTFALIDIYFKCRDVEMARKIFDQRTPVDI 316
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACSCLGSLQQGQLL 420
V +MISGYV N ++ AL+++ R L +R R+ T + + AC+ L +L G+ L
Sbjct: 317 VVCTAMISGYVLNGMNNNALEIF---RWLLQERMRANSVTLASVLPACAGLAALTLGKEL 373
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H H++K + YVG++++DMY++CG ++ A +F IS + W +++ S +G
Sbjct: 374 HGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKP 433
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
EA+ LF M + + LSAC ++ G +I M L + +
Sbjct: 434 EEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESAL 493
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+D+ + G+L A M E + V W ++++A
Sbjct: 494 IDMYSKCGNLDLACRVFDTME-EKNEVSWNSIIAA 527
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 143/531 (26%), Positives = 229/531 (43%), Gaps = 70/531 (13%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
NG + AR LFD+MP + V WN ML GY K +D + + M R+ N TF+ +
Sbjct: 195 NGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACV 254
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS--GLLFFYANCFEIEEAKRVFDELHED 148
LSVCA + G Q+H LV+ SG E V + L+ Y C ++E A+++FD+
Sbjct: 255 LSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQ---- 310
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRW 207
+ P VV T +ISGY ++G AL++FRW
Sbjct: 311 --------------------------RTPVDIVVC-TAMISGYV--LNGMNNNALEIFRW 341
Query: 208 MRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
+ + E M N T SV+ ACA L A GK +HG ++K G +G A+++ Y C
Sbjct: 342 LLQ--ERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKC 399
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMI 322
D A + + + + NS+I G+ E+A +F ++ T+ + +S ++ +
Sbjct: 400 GRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAAL 459
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIIS-----------------LNTMISVIPEM-ERNPV 364
A + K + M + S L+ V M E+N V
Sbjct: 460 SACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEV 519
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAH 423
+WNS+I+ Y + + +L L+ M I TF + AC G + +G
Sbjct: 520 SWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCM 579
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSE 482
+ + + +VD++ R G +N+A +S+ SP+ W L+ HG
Sbjct: 580 TEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHG---- 635
Query: 483 AVLLFEIMLEQ--DIVP-NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
V L E+ D+ P N+ +V + + AG +KI MK GV
Sbjct: 636 NVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGV 686
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 171/395 (43%), Gaps = 59/395 (14%)
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
S+++ C +G+ H ++ G ++ +G L+ Y C AF A ++ +L
Sbjct: 51 SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 283 CLNASNSLINGLISMGRIEDAELIFNR------LTEANSISY------------------ 318
C N +I G MG+ + A L + + L + + Y
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170
Query: 319 ---------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP 363
+S+IK Y+ G + D++ LF++MP ++
Sbjct: 171 DKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP-----------------SKDG 213
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
V WN M++GYV+N + A ++M MR+ + TF+ + C+ + G LH
Sbjct: 214 VLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGL 273
Query: 424 LVKTPFESNVYVGTS--LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
+V + E + V + L+D+Y +C + A+ F + ++ TA+++GY +G+ +
Sbjct: 274 VVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNN 333
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
A+ +F +L++ + N+ T VL AC + G ++ + G + + ++
Sbjct: 334 NALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIM 393
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
D+ + G L A + + + DAV W +++++C
Sbjct: 394 DMYAKCGRLDLAHQTFIGIS-DKDAVCWNSMITSC 427
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 202/608 (33%), Positives = 312/608 (51%), Gaps = 98/608 (16%)
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANC-----FEIEEAKRVFDELHEDNELLWSLMLV 158
KQ H L+L++G+ ++ L+ YAN E + RVFD + + N LW+ M+
Sbjct: 52 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111
Query: 159 GYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
++ N P K ++++ +++ +++ PN+
Sbjct: 112 VCIENN-----------EPFKAILLYYEMVVAHSR----------------------PNK 138
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
YT+ +V++AC+ G EG VH L+K G D I A+R+Y
Sbjct: 139 YTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHI-------------LSSAIRMY-- 183
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIF-NRLTEANSISYNSMIKGYAVYGQVDDSKRL 337
S GR+ +A I ++ E +++ +N+MI GY +G+V+ ++ L
Sbjct: 184 ----------------ASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAREL 227
Query: 338 FEKMPHRSIISL-NTMIS-------------VIPEM-ERNPVTWNSMISGYVQNNLHEKA 382
FE MP RS+IS N MIS EM ER+ ++W++MI GY+Q +A
Sbjct: 228 FEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEA 287
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L+++ M+K I + + AC+ LG+L QG+ +H + + + + +GTSLVDM
Sbjct: 288 LEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDM 347
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
Y++CG I+ A F +S+ V++W A++ G + HG +A+ LF M DI PN TF
Sbjct: 348 YAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITF 404
Query: 503 VGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
VGVL+AC GLV +G+ IF SM K YGV P +EHY C+VDLLGR+G L EAE+ + +P
Sbjct: 405 VGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP 464
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
E VWGALL AC N+E+GER + + L+ + Y +LSNIYA G+W + +
Sbjct: 465 TEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGE 524
Query: 622 IRKRLTHLEVKKDPGCSWIELN-SRVHAFSVEDRNNPNCNVIYATLEHLTANLN------ 674
+RK + +K PG S I+L VH F + D ++P IY L+ + L
Sbjct: 525 VRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEP 584
Query: 675 --SVVLFD 680
S VLFD
Sbjct: 585 DPSQVLFD 592
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 185/408 (45%), Gaps = 67/408 (16%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VSTN+ ++ ++ +FD + V WN M+ + + +++ L M +
Sbjct: 80 VSTNRYLS-------FESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVA 132
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ + N+ T+ +L C+ + +G Q+H ++K G + S + YA+ + EA
Sbjct: 133 HSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEA 192
Query: 139 KRVFD----------------------ELHEDNELL-----------WSLMLVGYVQCNL 165
+R+ D E+ EL W+ M+ G+ +C +
Sbjct: 193 RRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGM 252
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSV 224
+ A + F +M ++D + W+ +I GY + +GC +AL++F M++ + P ++ SV
Sbjct: 253 VEVAREFFDEMKERDEISWSAMIDGYIQ--EGCFMEALEIFHQMQKE-KIRPRKFVLPSV 309
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+ ACA LGA +G+ +H + + D +G +L++ Y C D A V++++ N +
Sbjct: 310 LSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEV 369
Query: 285 NASNSLINGLISMGRIEDAELIFNR---------------------LTEANSISYNSMIK 323
++ N++I GL GR EDA +F++ L + +NSM K
Sbjct: 370 SSWNAMIGGLAMHGRAEDAIDLFSKMDIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRK 429
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIIS-LNTMISVIPEMERNPVTWNSMI 370
Y V Q++ + + + +++ ++S IP E P W +++
Sbjct: 430 EYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP-TEPTPAVWGALL 476
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 136/340 (40%), Gaps = 41/340 (12%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M ++I + N I+ R G + AR FD+M R +SW+ M+ GY + F E+L +
Sbjct: 231 MPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEI 290
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M + ++ + ++LS CA L +L G+ IH ++ + +G+ L+ YA
Sbjct: 291 FHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAK 350
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C I+ A VF+++ W+ M+ G DA D+F KM D+
Sbjct: 351 CGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DI---------- 397
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFE 250
PNE TF V+ ACA G +G + + + + G E
Sbjct: 398 -----------------------YPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVE 434
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLEN-PCLNASNSLINGLISMGRIEDAELIFNR 309
G +++ A +V + P +L+ G +E E +
Sbjct: 435 PQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKI 494
Query: 310 LTE---ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
L E NS Y + YA G+ ++ + + M R I
Sbjct: 495 LLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGI 534
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS-----RCGSINDAQASFSSISSPNV 464
C SL + HA +++T + Y+ SLV Y+ R S + F + PNV
Sbjct: 44 CTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNV 103
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
W ++ + +A+LL+ M+ PN T+ VL AC +G+V EG+++
Sbjct: 104 FLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAH 163
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
+ +G+ + + + G L EA + D E+DAV W A++ + +E
Sbjct: 164 LVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVE- 222
Query: 585 GERAAQKMF 593
AA+++F
Sbjct: 223 ---AARELF 228
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 196/661 (29%), Positives = 330/661 (49%), Gaps = 90/661 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G LV AR LF++ PI ++W++++ GY K E L S M K ++ T ++L
Sbjct: 82 GNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVL 141
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ L+ L GK IHC +K E FV +GL+ Y+ C + EA+ +F L +
Sbjct: 142 RACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPD---- 197
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+K+ V WT +++GYA++ + KA++ F+ MR
Sbjct: 198 --------------------------RKNYVQWTAMLTGYAQNGESL-KAIQCFKEMRNQ 230
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G N +TF S++ AC + A+ G+ VHG +I GF + + AL++ Y C
Sbjct: 231 GME-SNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLAS 289
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----NRLTEANSISYNSMIKGYAV 327
A + D +E + NS+I G ++ G +E+A ++F NR + +Y S++K A
Sbjct: 290 ARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLAS 349
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNSM 369
+ + + + T+ + + +M +++ ++W S+
Sbjct: 350 CKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSL 409
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
++GYV N HEKALQL+ MR +D + + +F AC+ L ++ G+ +HA+ +K+
Sbjct: 410 VTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSA 469
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
S + SL+ MY++CG + DA S+ + NV +WTA++ GY+ +GL
Sbjct: 470 GSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNGL---------- 519
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSG 548
V G F SM K YG+ P + Y C++DLLGR+G
Sbjct: 520 -------------------------VETGQSYFESMEKVYGIKPASDRYACMIDLLGRAG 554
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
++EAE + M +E DA +W +LLSAC N+E+GERA + + L+ YV+LSN
Sbjct: 555 KINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSN 614
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+++V G+W IR+ + + + ++PG SWIE+ S+VH F EDR++P IY+ ++
Sbjct: 615 MFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDE 674
Query: 669 L 669
+
Sbjct: 675 M 675
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 141/279 (50%), Gaps = 16/279 (5%)
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER----------- 361
++++ N ++ + G+VD++++LF++MP+R + N MIS +
Sbjct: 35 SSNLDSNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNET 94
Query: 362 ---NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
N +TW+S++SGY +N + L+ + M ++ T + ACS L L G+
Sbjct: 95 PIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGK 154
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS-PNVAAWTALMNGYSHH 477
++H + +K E+N++V T LVDMYS+C + +A+ F S+ N WTA++ GY+ +
Sbjct: 155 MIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQN 214
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
G +A+ F+ M Q + N TF +L+AC G ++ + G P +
Sbjct: 215 GESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQ 274
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+ +VD+ + G L A + M I+ D V W +++ C
Sbjct: 275 SALVDMYAKCGDLASARMILDTMEID-DVVCWNSMIVGC 312
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/665 (29%), Positives = 347/665 (52%), Gaps = 57/665 (8%)
Query: 45 PIRT----VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSL 100
P RT V +N + + + + ++ L+ +S +L T+ ++L +CA L S
Sbjct: 58 PTRTIDHQVTDYNAKILHFCQLGDLENAMELICMCQKS--ELETKTYGSVLQLCAGLKSF 115
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
DGK++H ++ + +G L+ FYA C +++E +RVFD + + N LW+ M+ Y
Sbjct: 116 TDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEY 175
Query: 161 VQCNLMSD--------------------AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+ + AF++F K+ +DV+ W +ISGY S E+
Sbjct: 176 AKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYV-SNGLTER 234
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
L +++ M G ++ + T SV+ CA G GK VH L IK FE + L+
Sbjct: 235 GLGIYKQMMYLGIDV-DLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLL 293
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSI 316
+ Y C DGA+RV++++ + + S+I G GR + A + ++ + + +
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVV 353
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
+ S++ A G +D+ K + H I + N ME N N+++ Y +
Sbjct: 354 AITSILHACARSGSLDNGKDV-----HDYIKANN--------MESNLFVCNALMDMYAKC 400
Query: 377 NLHEKALQLYMTMRKLAI----------DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
E A ++ TM I T + + AC+ L +L++G+ +H ++++
Sbjct: 401 GSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILR 460
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ S+ +V +LVD+Y +CG + A+ F I S ++ +WT ++ GY HG G+EA+
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIAT 520
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLG 545
F M + I P+ +F+ +L AC +GL+ +G + F MK+ + + P LEHY C+VDLL
Sbjct: 521 FNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLS 580
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G+L +A EF++ +PI DA +WGALL C + ++E+ E+ A+++F L+ + YV+
Sbjct: 581 RTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVL 640
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF-SVEDRNNPNCNVIYA 664
L+NIYA KW + +R+++ ++K+PGCSWIE+ +V+ F S + ++P+ I +
Sbjct: 641 LANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIES 700
Query: 665 TLEHL 669
L+ +
Sbjct: 701 LLKKM 705
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/502 (22%), Positives = 197/502 (39%), Gaps = 131/502 (26%)
Query: 23 KAITECGRNGQLV-TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
K + E G G+ +A LFD++ R V+SWN+M+ GY + L + M +
Sbjct: 189 KIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 248
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ T ++L CA +L GK +H L +KS +E + LL Y+ C +++ A RV
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRV 308
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAK--SV 195
F+++ E N + W+ M+ GY + A + +M K+ DVV T ++ A+ S+
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSL 368
Query: 196 DG-------------------CEKALKLF----------------------RWMRESGEN 214
D C + ++ W GE
Sbjct: 369 DNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL 428
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P+ T V+ ACA L A GK +HG +++ G+ D + AL++ Y C
Sbjct: 429 KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC-------- 480
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
G++ + R L+F+ + + +S+ MI GY ++G +++
Sbjct: 481 ------------------GVLGLAR-----LLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
F +M R I
Sbjct: 518 IATFNEM------------------------------------------------RDAGI 529
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDA 452
+ +F + +ACS G L+QG +++K F E + +VD+ SR G+++ A
Sbjct: 530 EPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 588
Query: 453 QASFSSIS-SPNVAAWTALMNG 473
++ +P+ W AL+ G
Sbjct: 589 YEFMETLPIAPDATIWGALLCG 610
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 199/645 (30%), Positives = 325/645 (50%), Gaps = 58/645 (8%)
Query: 51 SWN--TMLCGYSKWAKFDESLSLVSTMHRSNVK-LNETTFSTILSVCAQLNSLIDGKQIH 107
WN L YS+WA+ + + + T+ + + + + E F ++L C + L +++
Sbjct: 32 GWNLPPTLTFYSEWAR-NNTFFIDDTLTQKHPRWVLEEHFISLLRSCKTVALL---QKVQ 87
Query: 108 CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
++ G++ +V ++ + ++ A+ +FD + LW+ + GY
Sbjct: 88 AQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYR 147
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
+ +F KM DV PN +TF V+++
Sbjct: 148 EVVFLFGKMKSMDV---------------------------------RPNCFTFPLVLKS 174
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
CA++GAF EG+ +H +IK G E ++ + LI+ Y G A A +++ + + A
Sbjct: 175 CAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAW 234
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
S+I+G I R+ A +F+ E + + +N M+ GY G + +++LF+ MP+R +
Sbjct: 235 TSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTM 294
Query: 348 SLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLY--MTMRK 391
S NTM++ + EM ERN +WN +I GY N + L+ + M +
Sbjct: 295 SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 354
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
L + + +VL AC+ LG+L G+ +H + F+ ++YVG +L+DMYS+CG I +
Sbjct: 355 LVVPNDATLVTVL-SACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIEN 413
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A F S+ ++ W +++ G + HG G++A+ LF M P+ TF+GVL +C
Sbjct: 414 AMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTH 473
Query: 512 AGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
GLV EG F SM Y + P +EHY C+VDL GR+G L A EF+K MP+E DAV+W
Sbjct: 474 LGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWA 533
Query: 571 ALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630
ALL AC + N+++ E A QK+ L+ K + YV+LSNIY LG+W ++ +
Sbjct: 534 ALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTG 593
Query: 631 VKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
KK PGCS IE+N V F D + IY L+ L L S
Sbjct: 594 SKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRS 638
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 216/485 (44%), Gaps = 83/485 (17%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
Q+ AR+LFD P V WN + GY A + E + L M +V+ N TF +L
Sbjct: 114 QMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLK 173
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN--------------------- 131
CA++ + ++G++IHC V+K G E +FV + L+ Y+
Sbjct: 174 SCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVA 233
Query: 132 ----------CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
C + A+R+FD E + +LW++M+ GY++ M A +F MP +D
Sbjct: 234 WTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDT 293
Query: 182 VVWTKLISGYAKS--VDGCEK----------------------------ALKLFRWMRES 211
+ W +++GYA + V+ CE+ L+ F+ M
Sbjct: 294 MSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLID 353
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G +PN+ T +V+ ACARLGA GK VH GF+ +G ALI+ Y C +
Sbjct: 354 GLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIEN 413
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAV 327
AM V++ ++ L NS+I GL + G DA +F+++ + + I++ ++
Sbjct: 414 AMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTH 473
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V++ F M + S+ P++E + M+ + + L ++A++
Sbjct: 474 LGLVEEGTSYFNSMVNE--------YSIAPQIEH----YGCMVDLFGRAGLLDRAIEF-- 519
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL-LHAHLVKTPFESNVYVGTSLVDMYSRC 446
++++ ++ ++ L AC ++ +L L +V P YV L ++Y
Sbjct: 520 -VKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYV--LLSNIYGDL 576
Query: 447 GSIND 451
G D
Sbjct: 577 GRWKD 581
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 165/412 (40%), Gaps = 77/412 (18%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
MK T+ ++T+ S N + NG + LF++MP R V SWN ++ GY+
Sbjct: 278 MKAARKLFDTMPYRDTM--SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYA 335
Query: 61 KWAKFDESLSLVSTMHRSNVKL-NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
F E L M + + N+ T T+LS CA+L +L GK +H G++
Sbjct: 336 HNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSI 395
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
+VG+ L+ Y+ C IE A VF+ + + + W+ M+ G
Sbjct: 396 YVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGL------------------- 436
Query: 180 DVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+ GC AL LF M+ +GE P+ TF V+ +C LG EG
Sbjct: 437 --------------ATHGCGADALTLFHQMKINGEK-PDGITFIGVLCSCTHLGLVEEGT 481
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM---RVYDRLENPCLNASNSLINGLI 295
++ + SI + + C + F A R + ++ + A + L+
Sbjct: 482 SYFNSMVN-----EYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 536
Query: 296 SMGR----IEDAELIFNRLT---EANSISYNSMIKGYAVYGQVDDSKRL--------FEK 340
R I+ AEL +L N +Y + Y G+ D RL +K
Sbjct: 537 GACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKK 596
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+P S+I +N +S++ Y + H ++ ++Y ++ L
Sbjct: 597 LPGCSLIEVN----------------DSVVEFYSLDERHSQSKEIYGVLKGL 632
>gi|8920616|gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical protein F19I3.26 gi|7485810
from Arabidopsis thaliana BAC F19I3 gb|AC004238. It
contains a PPR repeat domain PF|01535. ESTs gb|AV539170,
gb|AV551571, gb|AA597781, gb|AV544524, gb|AV531577 and
gb|AV533492 come from this gene [Arabidopsis thaliana]
Length = 864
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 212/680 (31%), Positives = 354/680 (52%), Gaps = 68/680 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V +++ + G L AR LF+ MP R +V+ N ML GY K + +E+ +L M +
Sbjct: 180 VVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK 239
Query: 78 SNVKLNETTFSTILSV---------------------CAQLNSLIDGKQIHCLVLKSGYE 116
N +++ +L+ N+L+ G I ++ +
Sbjct: 240 -----NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTG-LIRNGDMEKAKQ 293
Query: 117 CFEFVGS-------GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
F+ + S ++ Y +EEAK +F ++ E N + W+ M+ GY + + +A
Sbjct: 294 VFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREA 353
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRAC 228
+ +F +MP++++V WT +ISG+A + + +AL LF M++ + + PN T S+ AC
Sbjct: 354 YRLFCEMPERNIVSWTAMISGFAWN-ELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 412
Query: 229 ARLGAFCE--GKVVHGLLIKCGFE---FDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
LG G+ +H +I G+E D + +L+ Y A + + E+
Sbjct: 413 GGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFD 470
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEA-NSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
L + N +IN + G +E AE +F R+ + +S+ SMI GY G V + LF+K+
Sbjct: 471 LQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL- 529
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
+++ VTW MISG VQN L +A L M + + ST+S
Sbjct: 530 ----------------HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYS 573
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTP--FESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
VL + +L QG+ +H + KT ++ ++ + SLV MY++CG+I DA F+ +
Sbjct: 574 VLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMV 633
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ +W +++ G SHHGL +A+ LF+ ML+ PN+ TF+GVLSAC +GL+ G++
Sbjct: 634 QKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLE 693
Query: 521 IFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF- 578
+F++MK +Y + P ++HY ++DLLGR+G L EAEEFI +P D V+GALL C
Sbjct: 694 LFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLN 753
Query: 579 WMNME---VGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
W + + + ERAA ++ LD +V L N+YA LG+ + ++RK + VKK P
Sbjct: 754 WRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTP 813
Query: 636 GCSWIELNSRVHAFSVEDRN 655
GCSW+ +N R + F D++
Sbjct: 814 GCSWVVVNGRANVFLSGDKS 833
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 128/276 (46%), Gaps = 58/276 (21%)
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSIS----YNSMIKGYAVYGQVDDSKRLFEKMPHR 344
+LI +S G + A + +++ + SI+ + S++ YA G +D+++ LFE MP R
Sbjct: 150 ALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER 209
Query: 345 SIISLNTMIS-------------------------------------------VIPEM-E 360
+I++ N M++ + EM E
Sbjct: 210 NIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPE 269
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
RN V+WN++++G ++N EKA Q++ M R +++ + +++ +LL
Sbjct: 270 RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPS----RDVVSWNAMIKGYIENDGMEEAKLL 325
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
+ E NV TS+V Y R G + +A F + N+ +WTA+++G++ + L
Sbjct: 326 FGDMS----EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELY 381
Query: 481 SEAVLLF-EIMLEQDIV-PNAATFVGVLSACVRAGL 514
EA++LF E+ + D V PN T + + AC G+
Sbjct: 382 REALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 417
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 43/298 (14%)
Query: 6 TQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSK--- 61
+Q+L+ + + S N I +NG L A LF+++ + VSW +M+ GY +
Sbjct: 459 ASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGD 518
Query: 62 ------------------WAK----------FDESLSLVSTMHRSNVKLNETTFSTILSV 93
W F E+ SL+S M R +K +T+S +LS
Sbjct: 519 VSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSS 578
Query: 94 CAQLNSLIDGKQIHCLVLKSG--YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
++L GK IHC++ K+ Y+ + + L+ YA C IE+A +F ++ + + +
Sbjct: 579 AGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTV 638
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
W+ M++G L A ++F +M K + V + ++S + S + L+LF+
Sbjct: 639 SWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHS-GLITRGLELFKA 697
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M+E+ P + S+I R G E + L F D ++ GAL+ CG
Sbjct: 698 MKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISAL---PFTPDHTVYGALLGL-CG 751
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 192/594 (32%), Positives = 304/594 (51%), Gaps = 54/594 (9%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TF ++ CA + S I GK IH VL+ G++ VG+ L+ YA + +A+ +FD +
Sbjct: 44 TFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRM 103
Query: 146 HEDNELLWSLMLVGYV---QCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAKSVDGC 198
+ + W+ M+ Y CN A ++F +M + ++V WT LIS YA+S
Sbjct: 104 SVRSYISWNTMVSAYAFNYDCN---GALEIFQRMESEGMEPNLVTWTSLISSYARS-GWH 159
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
E+A++LF MR G + E VI CA LGAF K++H +K GFE + A
Sbjct: 160 EEAMELFGLMRMKGVEVSGE-ALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSA 218
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
LI Y +GA ++ ++N L S+
Sbjct: 219 LICVYGKHGDVNGAWNLFLEMKNKSL-------------------------------ASW 247
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N++I +A G D++ +F ++ RS P + N V+W+++I G+
Sbjct: 248 NALITSHAEAGLCDEALEIFSQL-ERS--------GDCPRLRPNVVSWSAIIDGFASKGR 298
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
++AL+L+ M+ I T S + C+ L +L G+ +H H+V+ +N+ VG
Sbjct: 299 EKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNG 358
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
LV+MY++CG + + F ++ +W +++ GY HGLG A+ F+ M++ P+
Sbjct: 359 LVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPD 418
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
TFV VLS+C +GLV+EG ++F M K Y + P +EHY C+VDLLGR+G L EA E +
Sbjct: 419 GVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIV 478
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISA-YVILSNIYAVLGKW 616
K+MP+ +A VWGALL++C N E+ E A +F L + + Y++LSNIYA G+W
Sbjct: 479 KNMPVAPNACVWGALLNSCRMHNNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRW 538
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
+R +KK+PG SWI++ V+ FS + I+ LE LT
Sbjct: 539 EDSARVRTSAKTKGLKKNPGQSWIKVEKNVYTFSAGNNMQRGFEQIFEILEELT 592
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 170/355 (47%), Gaps = 51/355 (14%)
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
R MR+ G + + +TF VIRACA +G+F GK +HG +++ GF+ +G LI Y
Sbjct: 31 RRMRKIG-TLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYA- 88
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
+GR+ DA +F+R++ + IS+N+M+ Y
Sbjct: 89 ------------------------------KLGRMRDARHLFDRMSVRSYISWNTMVSAY 118
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
A + + +F++M ME N VTW S+IS Y ++ HE+A++L
Sbjct: 119 AFNYDCNGALEIFQRMESEG-------------MEPNLVTWTSLISSYARSGWHEEAMEL 165
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ MR ++ + +V+ C+ LG+ + +++H + VK FE +V ++L+ +Y +
Sbjct: 166 FGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGK 225
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD-----IVPNAA 500
G +N A F + + ++A+W AL+ ++ GL EA+ +F LE+ + PN
Sbjct: 226 HGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFS-QLERSGDCPRLRPNVV 284
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
++ ++ G E +++FR M+ ++ + V+ L LH E
Sbjct: 285 SWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGRE 339
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 179/387 (46%), Gaps = 59/387 (15%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGY---------------------- 59
N+ I + G++ AR+LFD+M +R+ +SWNTM+ Y
Sbjct: 81 NELIGMYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGME 140
Query: 60 ----------SKWAK---FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
S +A+ +E++ L M V+++ + ++S+CA L + + K I
Sbjct: 141 PNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKII 200
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H +K G+E + FV S L+ Y ++ A +F E+ + W+ ++ + + L
Sbjct: 201 HEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLC 260
Query: 167 SDAFDVFIKMPKK--------DVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPN 217
+A ++F ++ + +VV W+ +I G+A G EK AL+LFR M+ + + + N
Sbjct: 261 DEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFAS--KGREKEALELFRRMQHA-KILAN 317
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
T +V+ CA L A G+ +HG +++ + +G L+ Y C +++
Sbjct: 318 AVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFE 377
Query: 278 RLENPCLNASNSLINGL----ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
+ E L + NS+I G + M +E + + + + +++ +++ + G V +
Sbjct: 378 KTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHE 437
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEME 360
+RLF++M + I P+ME
Sbjct: 438 GRRLFDQMLKKYRIE--------PQME 456
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMP-------IR-TVVSWNTMLCGYSKWAKFDESL 69
+ S N IT G A +F Q+ +R VVSW+ ++ G++ + E+L
Sbjct: 244 LASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEAL 303
Query: 70 SLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY 129
L M + + N T ST+LS+CA+L +L G++IH V+++ VG+GL+ Y
Sbjct: 304 ELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMY 363
Query: 130 ANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK 178
A C ++E +F++ + + W+ M+ GY L +A + F +M K
Sbjct: 364 AKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIK 412
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 196/672 (29%), Positives = 348/672 (51%), Gaps = 61/672 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++G + A+ +FD + +V WN +L G+ + +E++ + M R++++ ++ TF +
Sbjct: 371 KHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVS 430
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C L SL G+Q+HC+ +K+G + FV + +L Y+ I+ AK +F +
Sbjct: 431 VLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLI---- 486
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
P KD V W LI G A + + E A+ + + M+
Sbjct: 487 ---------------------------PVKDSVSWNALIVGLAHNEEEGE-AINMLKRMK 518
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G + +E +F + I AC+ + A GK +H IK + ++G +LI+ Y
Sbjct: 519 FYGIAL-DEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDV 577
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKG- 324
+ + +V ++ + N+LI GL+ R ++A +F ++ + ++ ++ S++ G
Sbjct: 578 ESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGC 637
Query: 325 ----YAVYGQVDDSKRLFEKMPHRSI---ISL-------------NTMISVIPEMERNPV 364
+V G+ L + ++ ISL N ++ +P+ +N V
Sbjct: 638 TRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPD-HKNLV 696
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
W + ISGY QN ++L ++ MR + +TF+ + ACS + +L G+ +H +
Sbjct: 697 EWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLI 756
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS-PNVAAWTALMNGYSHHGLGSEA 483
VK+ F S ++L+DMYS+CG + + F + + N+ W +++ G++ +G +EA
Sbjct: 757 VKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEA 816
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVD 542
+LLF+ M E I P+ T +GVL AC AGL++EG+ F SM YG+VP ++HY C++D
Sbjct: 817 LLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLID 876
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISA 602
LLGR GHL +A+E I +P D V+W L+AC + E G+ AA+K+ ++ + S
Sbjct: 877 LLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSST 936
Query: 603 YVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
YV LS+++A G W + R+ + V K PGCSWI + ++ F V+D ++P+ I
Sbjct: 937 YVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKQSVFVVQDTHHPDALSI 996
Query: 663 YATLEHLTANLN 674
Y L+ LT +N
Sbjct: 997 YKMLDDLTGMMN 1008
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/590 (23%), Positives = 263/590 (44%), Gaps = 91/590 (15%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
I+ G+L AR L ++ + + V+WN ++ YS+ E L M + +
Sbjct: 265 ISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTR 324
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
+TF++ILS A + + +G+QIH +K G + FVGS L+ Y I +AK+VFD
Sbjct: 325 STFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDF 384
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
E N ++W+ +L G+VQ L E+ +++
Sbjct: 385 STEKNIVMWNAILYGFVQNELQ--------------------------------EETIQM 412
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F++MR + + +++TF SV+ AC L + G+ VH + IK G + D + A+++ Y
Sbjct: 413 FQYMRRA-DLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYS 471
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGL--------------------ISMGRIEDAE 304
A D A ++ + + N+LI GL I++ + A
Sbjct: 472 KLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFAT 531
Query: 305 LI----------FNRLTEANSISYN---------SMIKGYAVYGQVDDSKRLFEKMPHRS 345
I + + SI YN S+I Y+ +G V+ S+++ + S
Sbjct: 532 AINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASS 591
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
I+ + N++I+G VQNN ++A++L+ + K + TF+ +
Sbjct: 592 IVPI-----------------NALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSIL 634
Query: 406 HACSCLGSLQQGQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISS-PN 463
C+ S G+ +H + +K+ + +G SLV +Y +C + DA + N
Sbjct: 635 SGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKN 694
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+ WTA ++GY+ +G +++++F M D+ + ATF VL AC + +G +I
Sbjct: 695 LVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHG 754
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G V + ++D+ + G + + E K++ + + W +++
Sbjct: 755 LIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMI 804
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/569 (22%), Positives = 251/569 (44%), Gaps = 96/569 (16%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
++ + +LS C++L +L G+Q+HC VLKSG+ F +GL+ YA C E+++A+R+F
Sbjct: 156 DQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMF 215
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK------------------------ 178
D + + + W+ M+ GY + A +F +M K
Sbjct: 216 DGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLG 275
Query: 179 -----------KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
V W +I+ Y++S E L++ M++ G MP TF S++ A
Sbjct: 276 DARTLLKRIRMTSTVAWNAVIASYSQSGLDSE-VFGLYKDMKKQGL-MPTRSTFASILSA 333
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
A + AF EG+ +H +K G + + +G +LI Y A +V+D +
Sbjct: 334 AANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMW 393
Query: 288 NSLINGLISMGRIEDAELIFNRLT----EANSISY------------------------- 318
N+++ G + E+ +F + EA+ ++
Sbjct: 394 NAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIK 453
Query: 319 ----------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
N+M+ Y+ G +D +K LF +P ++ V+WN+
Sbjct: 454 NGMDADLFVANAMLDMYSKLGAIDVAKALFSLIP-----------------VKDSVSWNA 496
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
+I G N +A+ + M+ I +F+ +ACS + +++ G+ +H+ +K
Sbjct: 497 LIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYN 556
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
SN VG+SL+D+YS+ G + ++ + + + ++ AL+ G + EA+ LF+
Sbjct: 557 VCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQ 616
Query: 489 IMLEQDIVPNAATFVGVLSACVR--AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
+L+ P+ TF +LS C R + ++ + + + ++KS + +V + +
Sbjct: 617 QVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCY-TLKSAILNQDTSLGISLVGIYLK 675
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
L +A + ++++P + V W A +S
Sbjct: 676 CKLLEDANKLLEEVPDHKNLVEWTATISG 704
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 206/422 (48%), Gaps = 31/422 (7%)
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
L F+ +R S + P+++ V+ AC+RLGA G+ VH ++K GF L++
Sbjct: 141 LDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVD 200
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYN-- 319
Y C D A R++D + P S+I G +GR + A +F+R+ + S+
Sbjct: 201 MYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVT 260
Query: 320 --SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
++I A G++ D++ L +++ S V WN++I+ Y Q+
Sbjct: 261 CVTIISTLASMGRLGDARTLLKRIRMTST-----------------VAWNAVIASYSQSG 303
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
L + LY M+K + TRSTF+ + A + + + +G+ +HA VK ++NV+VG+
Sbjct: 304 LDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGS 363
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SL+++Y + G I+DA+ F + N+ W A++ G+ + L E + +F+ M D+
Sbjct: 364 SLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEA 423
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
+ TFV VL AC+ ++ G ++ G+ L ++D+ + G + A+
Sbjct: 424 DDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALF 483
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGER----AAQKMFGLDKKPIS---AYVILSNIY 610
+P++ D+V W AL+ N E GE K +G+ +S A SNI+
Sbjct: 484 SLIPVK-DSVSWNALIVG--LAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIW 540
Query: 611 AV 612
A+
Sbjct: 541 AI 542
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 205/691 (29%), Positives = 350/691 (50%), Gaps = 61/691 (8%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
L ++ + + T++ +N IT GR +AR +FD M R VSW ++ +++
Sbjct: 67 LASSAGAAYLARNTIL--SNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQN 124
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
++ +++ L S+M R +E + + CA+L L G+Q+H +KS V
Sbjct: 125 SRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQ 184
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ L+ Y+ + D F +F ++ KD+
Sbjct: 185 NALVTMYSKSGSV-------------------------------GDGFALFERIRDKDLF 213
Query: 183 VWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSVIRACAR-LGAFCEGKVV 240
W +I+G A+ G E AL +FR M G + PNE+ F SV RAC+ + + G+ +
Sbjct: 214 SWGSIIAGLAQQ--GREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQI 271
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
HGL +K + + G +L + Y C D AM+V+ R+E+P L + NSLIN + G +
Sbjct: 272 HGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLL 331
Query: 301 EDAELIFNRLTEAN--------------SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
+A ++F+ + ++ + +++ +G +++ + + M S+
Sbjct: 332 SEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSL 391
Query: 347 ISLNTMISVIPEM--------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
IS+ T P +R+ VTWNS+++ VQ+ E +L+ + R
Sbjct: 392 ISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDR 451
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
+ + + A + LG + + +HA+ K S+ + +L+D Y++CGS++DA F
Sbjct: 452 ISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEI 511
Query: 459 ISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
+ + +V +W++L+ GY+ G EA+ LF M + PN TFVGVL AC R GLV+E
Sbjct: 512 MGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDE 571
Query: 518 GMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
G + M+ YG+VPT EH +CV+DLL R+G L EA +F+ MP E D ++W LL+A
Sbjct: 572 GCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAAS 631
Query: 577 WFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPG 636
++E+G+RAA+ + +D +AYV+L NIYA G W + ++K + V+K PG
Sbjct: 632 RTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPG 691
Query: 637 CSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
SWI+L + F VEDR++P + +Y L+
Sbjct: 692 KSWIKLKGELKVFIVEDRSHPESDEMYTMLD 722
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 170/409 (41%), Gaps = 78/409 (19%)
Query: 228 CARLGAFCEGKVVHGLLI--KCGFEF---DESIGGALIEFYCGCEAFDGAMRVYDRL--E 280
C+RL +F +G++VH L+ G + + + LI Y C A D A V+D +
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 281 NP-------CLNASNS-------LINGLISMGRIED--------------AELIFNRLTE 312
NP +A NS L + ++ +G D +L R
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169
Query: 313 ANSIS---------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP 363
A +I N+++ Y+ G V D LFE++ + + S
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFS--------------- 214
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACS-CLGSLQQGQLLH 421
W S+I+G Q AL ++ M + F +F ACS + SL+ G+ +H
Sbjct: 215 --WGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIH 272
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
VK + N Y G SL DMY+RC ++ A F I SP++ +W +L+N +S GL S
Sbjct: 273 GLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLS 332
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV-------PTL 534
EA++LF M + P+ T + +L ACV + +G I + G+ +
Sbjct: 333 EAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLI 392
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
YT +D HE + D V W ++L+AC +ME
Sbjct: 393 SMYTRCLDFPSAMDVFHETN--------DRDVVTWNSILTACVQHRHME 433
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 187/528 (35%), Positives = 286/528 (54%), Gaps = 17/528 (3%)
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
++ A +F + ++ LI + S E AL L+ M +SG P+ T+ V
Sbjct: 144 FLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLE-ALPLYHTMLQSGLK-PDHMTYPFV 201
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
I+AC G +VH ++K GFE D I +LI Y + A ++++ +
Sbjct: 202 IKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDV 261
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
+ N++I+G + + A ++F+R+ + IS+N+MI GYA+ G++D++KRLF++MP R
Sbjct: 262 VSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPER 321
Query: 345 SIISLNTMIS-------------VIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+++S N+M++ + EM R+ V+WNSM++ Y Q +AL L+ MR
Sbjct: 322 NLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMR 381
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+ + T +T L AC+ LG+L +G LH ++ E N VGT+LVDMY++CG I+
Sbjct: 382 AVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKIS 441
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A F+++ S +V AW ++ G + HG EA LF+ M E + PN TFV +LSAC
Sbjct: 442 LATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACS 501
Query: 511 RAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
AG+V+EG K+ M SYG+ P +EHY CV+DLL R+G L EA E I MP+E +
Sbjct: 502 HAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSAL 561
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
GALL C N E+GE +++ L Y++LSNIYA KW +R +
Sbjct: 562 GALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVN 621
Query: 630 EVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSVV 677
+ K PG S IEL VH F D ++P N IY L + L S +
Sbjct: 622 GISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAI 669
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 208/455 (45%), Gaps = 37/455 (8%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A+ +F + +N+++ S E+L L TM +S +K + T+ ++
Sbjct: 145 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA 204
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
C + + G +H V+KSG+EC ++ S L+ YAN ++ AK++F+ + + W
Sbjct: 205 CNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSW 264
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ M+ GYV+ M A VF +M +DV+ W +I+GYA V ++A +LF M E
Sbjct: 265 NAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYA-IVGKIDEAKRLFDEMPER-- 321
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
N +++S++ + G + GL + D +++ Y C + A+
Sbjct: 322 ---NLVSWNSMLAGFVKCGNVEDA---FGLFSEMPCR-DVVSWNSMLACYAQCGKPNEAL 374
Query: 274 RVYDRLE----NPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSISYNSMIKGY 325
++D++ P SL++ +G ++ I + E NSI +++ Y
Sbjct: 375 ALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMY 434
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
A G++ + ++F M + +++ WN++I+G + ++A QL
Sbjct: 435 AKCGKISLATQVFNAMESKDVLA-----------------WNTIIAGMAIHGNVKEAQQL 477
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ-LLHAHLVKTPFESNVYVGTSLVDMYS 444
+ M++ ++ TF + ACS G + +GQ LL E V ++D+ +
Sbjct: 478 FKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLA 537
Query: 445 RCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
R G + +A ++ PN +A AL+ G HG
Sbjct: 538 RAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHG 572
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 159/353 (45%), Gaps = 48/353 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS N + + G + A LF +MP R VVSWN+ML Y++ K +E+L+L
Sbjct: 320 ERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQ 379
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M VK E T ++LS CA L +L G +H + + E VG+ L+ YA C +
Sbjct: 380 MRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGK 439
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I A +VF+ M KDV+ W +I+G A
Sbjct: 440 ISLATQVFN-------------------------------AMESKDVLAWNTIIAGMA-- 466
Query: 195 VDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFD 252
+ G ++A +LF+ M+E+G PN+ TF +++ AC+ G EG K++ + G E
Sbjct: 467 IHGNVKEAQQLFKEMKEAGVE-PNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPK 525
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNR-- 309
G +I+ + AM + + P +A +L+ G G E E++ R
Sbjct: 526 VEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLI 585
Query: 310 -LTEANSISYNSMIKGYAVYGQVDDSKRL--------FEKMPHRSIISLNTMI 353
L +S Y + YA + DD++++ K+P S+I L M+
Sbjct: 586 NLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMV 638
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 209/702 (29%), Positives = 345/702 (49%), Gaps = 98/702 (13%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIR-TVVSWNTMLCGYSKWAKFDESLSLVST 74
+++ N + + L AR LFD+MP + VVSWN+M+ YS + E+L L
Sbjct: 249 SIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGE 308
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++++ N TF L C + + G IH VLKS Y FV + L+ YA
Sbjct: 309 MQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYA---- 364
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+ M +A ++F M D + W ++SG+ +
Sbjct: 365 ---------------------------RFGKMGEAANIFYNMDDWDTISWNSMLSGFVQ- 396
Query: 195 VDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+G +AL+ + MR++G+ P+ S+I A AR G G +H +K G + D
Sbjct: 397 -NGLYHEALQFYHEMRDAGQK-PDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDL 454
Query: 254 SIGGALIEFY---CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG------------ 298
+G +L++ Y C + D ++D++ + + + ++I G G
Sbjct: 455 QVGNSLVDMYAKFCSMKYMDC---IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREV 511
Query: 299 RIEDAEL----------------IFNRLTEANS----------ISYNSMIKGYAVYGQVD 332
++E +L + + + E +S + N ++ Y G VD
Sbjct: 512 QLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVD 571
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+ R+FE + + ++S W SMIS YV N L +AL+L+ M++
Sbjct: 572 YAARMFELIEFKDVVS-----------------WTSMISCYVHNGLANEALELFHLMKET 614
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
++ + + A + L +L++G+ +H L++ F + ++LVDMY+RCG++ +
Sbjct: 615 GVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKS 674
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ F+ I + ++ WT+++N Y HG G A+ LF M ++ I P+ FV VL AC +
Sbjct: 675 RNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHS 734
Query: 513 GLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GL+NEG + SMK Y + P EHY C+VDLLGR+ HL EA +F+K M +E A VW A
Sbjct: 735 GLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCA 794
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
LL AC N E+GE AAQK+ +D + YV++SN+YA +W ++R R+ +
Sbjct: 795 LLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGL 854
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
KK+PGCSWIE+ ++VH F D+++P IY+ L +T L
Sbjct: 855 KKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKL 896
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 145/572 (25%), Positives = 272/572 (47%), Gaps = 62/572 (10%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G LV A LFD MP +T+ +WN M+ Y + SL L M S + L+ TF
Sbjct: 161 GKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFP 220
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
IL C L G ++H L +K GY FV + ++ Y C ++ A+++FD + E
Sbjct: 221 CILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPE- 279
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
K+DVV W +IS Y+ + E AL+LF M
Sbjct: 280 -----------------------------KEDVVSWNSMISAYSSNGQSIE-ALRLFGEM 309
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+++ PN YTF + ++AC +G +H ++K + + + ALI Y
Sbjct: 310 QKASL-APNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGK 368
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE---------------A 313
A ++ +++ + NS+++G + G +A ++ + + A
Sbjct: 369 MGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAA 428
Query: 314 NSISYNSM----IKGYAVYGQVDDSKRLFEKMP--HRSIISLNTMISVIPEM-ERNPVTW 366
++ S N++ I YA+ +D ++ + + S+ M + +M +++ V+W
Sbjct: 429 SARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSW 488
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
++I+G+ QN H +AL+L+ ++ ID S + ACS L + + +H+++++
Sbjct: 489 TTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIR 548
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
S++ + +VD+Y CG+++ A F I +V +WT++++ Y H+GL +EA+ L
Sbjct: 549 KGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALEL 607
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
F +M E + P++ + V +LSA + +G +I + G V + +VD+ R
Sbjct: 608 FHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYAR 667
Query: 547 SGHLHEAE---EFIKDMPIELDAVVWGALLSA 575
G L ++ FI++ D V+W ++++A
Sbjct: 668 CGTLEKSRNVFNFIRNK----DLVLWTSMINA 695
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 133/539 (24%), Positives = 240/539 (44%), Gaps = 70/539 (12%)
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
F L + S L+E +S++L +C +L +G+Q+H + S
Sbjct: 96 FQSLTDLFANQSPSQFSLDEA-YSSVLELCGSKKALSEGQQVHA----------HMITSN 144
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
LF ++ L + ++ Y +C + DA +F MP K + W
Sbjct: 145 ALF--------------------NSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTW 184
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
+I Y + + +L+L+R MR SG + + TF +++AC L G VHGL
Sbjct: 185 NAMIGAYVTNGEPL-GSLELYREMRVSGIPL-DACTFPCILKACGLLKDRRCGAEVHGLA 242
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL-ENPCLNASNSLINGLISMGRIEDA 303
IK G+ + +++ Y C +GA +++DR+ E + + NS+I+ S G+ +A
Sbjct: 243 IKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEA 302
Query: 304 ELIFNRLTEA----NSISY---------NSMIK-GYAVYGQVDDSKRLFEKMPHRSIISL 349
+F + +A N+ ++ +S IK G ++ V S ++I++
Sbjct: 303 LRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAM 362
Query: 350 NTMISVIPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
+ E + ++WNSM+SG+VQN L+ +ALQ Y MR
Sbjct: 363 YARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAV 422
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
+ A + G+ G +HA+ +K +S++ VG SLVDMY++ S+ F +
Sbjct: 423 ISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPD 482
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+V +WT ++ G++ +G S A+ LF + + I + +L AC G+K+
Sbjct: 483 KDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLAC-------SGLKL 535
Query: 522 FRSMK---SYGVVPTLEHYTC---VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
S+K SY + L +VD+ G G++ A + + + D V W +++S
Sbjct: 536 ISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS 593
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 7/180 (3%)
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
+S + C +L +GQ +HAH++ + ++V++ T LV MY +CG + DA+ F
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 175
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE- 517
+ + W A++ Y +G ++ L+ M I +A TF +L AC GL+ +
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKAC---GLLKDR 232
Query: 518 --GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G ++ G V + +V + + L+ A + MP + D V W +++SA
Sbjct: 233 RCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISA 292
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 195/650 (30%), Positives = 333/650 (51%), Gaps = 59/650 (9%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
MP + VV+W +++ GY++ + + +L++ + M S V N+ + L CA L +L G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
+Q+H L +++G+ ++GS L+ Y+ C + AK
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAK------------------------ 96
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+VF +M DVV +T LIS + ++ + A L + +++ + PNE+T +
Sbjct: 97 -------EVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLK--PNEHTMTT 147
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESI--GGALIEFYCGCEAFDGAMRVYDRLEN 281
++ AC R+ G+ +HG LIK +S+ ALI+FY F A V+D L
Sbjct: 148 ILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHC 203
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYN-------SMIKGYAVYGQ 330
+ + S++ I GR+E+A +F + + N + + S+ G ++
Sbjct: 204 KNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCS 263
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEME------RNP--VTWNSMISGYVQNNLHEKA 382
+ + +++S+ ++ E+E NP V+W + IS QN EKA
Sbjct: 264 AIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKA 323
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
+ L M FS + +C+ + SL QG H +K +S + G +L++M
Sbjct: 324 IALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINM 383
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
YS+CG + A+ +F + + +V +W +L++G++ HG ++A+ +F M I P+ +TF
Sbjct: 384 YSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTF 443
Query: 503 VGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+GVL C +G+V EG FR M Y P HY C++D+LGR+G EA I DMP
Sbjct: 444 LGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMP 503
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
E DA++W LL++C N+++G+ AA ++ L + ++YV++SNIYA+ G+W
Sbjct: 504 FEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARK 563
Query: 622 IRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
+R+R+ VKKD GCSWIE+N+ VH F+ D ++PN + IY L L A
Sbjct: 564 VRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVA 613
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 181/441 (41%), Gaps = 58/441 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S+ I RNG+ A+ +FD + + VVSW +M+ Y + + +E+L + M
Sbjct: 175 VYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMIS 234
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V NE S +L C + G+Q+HC +K V + LL Y +EE
Sbjct: 235 EGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEE 291
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+ + + K+ D+V WT IS ++ G
Sbjct: 292 LEAMLN-------------------------------KIENPDLVSWTTAISANFQNGFG 320
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
EKA+ L M G PN Y F SV+ +CA + + +G H L +K G + + G
Sbjct: 321 -EKAIALLCQMHSEGFT-PNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGN 378
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEA 313
ALI Y C A +D + + + NSLI+G G A +F+++ +
Sbjct: 379 ALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKP 438
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
+ ++ ++ G G V++ + F M + S P P + MI
Sbjct: 439 DDSTFLGVLMGCNHSGMVEEGELFFRLMIDQ--------YSFTPA----PSHYACMIDML 486
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESN 432
+N ++AL++ + + + + L +C +L G+L L++ + +S
Sbjct: 487 GRNGRFDEALRM---INDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSA 543
Query: 433 VYVGTSLVDMYSRCGSINDAQ 453
YV S ++Y+ G DA+
Sbjct: 544 SYVLMS--NIYAMHGEWEDAR 562
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 149/334 (44%), Gaps = 44/334 (13%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
T I +N ++ GR G + + +++ +VSW T + + +++++L+ M
Sbjct: 271 TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQM 330
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
H N FS++LS CA + SL G Q HCL LK G + G+ L+ Y+ C ++
Sbjct: 331 HSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 390
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A+ FD +H + W+ ++ G+ Q DA
Sbjct: 391 GSARLAFDVMHTHDVTSWNSLIHGHAQ---HGDA-------------------------- 421
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI-KCGFEFDES 254
KAL++F MR +G P++ TF V+ C G EG++ L+I + F S
Sbjct: 422 ---NKALEVFSKMRSNGIK-PDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPS 477
Query: 255 IGGALIEFYCGCEAFDGAMRVY-------DRLENPCLNASNSLINGLISMGRIEDAELIF 307
+I+ FD A+R+ D L L AS L L +G++ L+
Sbjct: 478 HYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNL-DIGKLAADRLM- 535
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
L++ +S SY M YA++G+ +D++++ +M
Sbjct: 536 -ELSDRDSASYVLMSNIYAMHGEWEDARKVRRRM 568
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
++ I + N I + GQ+ +AR FD M V SWN+++ G+++ +++L + S
Sbjct: 371 DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSK 430
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL--------KSGYEC-FEFVGSGL 125
M + +K +++TF +L C + +G+ L++ S Y C + +G
Sbjct: 431 MRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNG 490
Query: 126 LFFYANCFEIEEAKRVFDEL-HEDNELLWSLMLVGYVQCNLMSD------AFDVFIKMPK 178
F +EA R+ +++ E + L+W +L C L + A D +++
Sbjct: 491 RF--------DEALRMINDMPFEPDALIWKTLL---ASCKLHRNLDIGKLAADRLMELSD 539
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
+D + + + YA + E A K+ R M E+G
Sbjct: 540 RDSASYVLMSNIYAMHGE-WEDARKVRRRMDETG 572
>gi|18398422|ref|NP_564401.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806407|sp|P0C7R0.1|PPR69_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g32415, mitochondrial; Flags: Precursor
gi|332193363|gb|AEE31484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 212/672 (31%), Positives = 352/672 (52%), Gaps = 66/672 (9%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK--- 81
+++ + G L AR LF+ MP R +V+ N ML GY K + +E+ +L M ++ V
Sbjct: 84 LSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTV 143
Query: 82 -----------------LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS- 123
+E ++S N+L+ G I ++ + F+ + S
Sbjct: 144 MLTALCDDGRSEDAVELFDEMPERNVVS----WNTLVTG-LIRNGDMEKAKQVFDAMPSR 198
Query: 124 ------GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
++ Y +EEAK +F ++ E N + W+ M+ GY + + +A+ +F +MP
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCE 236
++++V WT +ISG+A + + +AL LF M++ + + PN T S+ AC LG
Sbjct: 259 ERNIVSWTAMISGFAWN-ELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFR 317
Query: 237 --GKVVHGLLIKCGFE---FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
G+ +H +I G+E D + +L+ Y A + + E+ L + N +I
Sbjct: 318 RLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNIII 375
Query: 292 NGLISMGRIEDAELIFNRLTEA-NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
N + G +E AE +F R+ + +S+ SMI GY G V + LF+K+
Sbjct: 376 NRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL--------- 426
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
+++ VTW MISG VQN L +A L M + + ST+SVL +
Sbjct: 427 --------HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGA 478
Query: 411 LGSLQQGQLLHAHLVKTP--FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+L QG+ +H + KT ++ ++ + SLV MY++CG+I DA F+ + + +W
Sbjct: 479 TSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWN 538
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-S 527
+++ G SHHGL +A+ LF+ ML+ PN+ TF+GVLSAC +GL+ G+++F++MK +
Sbjct: 539 SMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKET 598
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF-WMNME--- 583
Y + P ++HY ++DLLGR+G L EAEEFI +P D V+GALL C W + +
Sbjct: 599 YSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEG 658
Query: 584 VGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELN 643
+ ERAA ++ LD +V L N+YA LG+ + ++RK + VKK PGCSW+ +N
Sbjct: 659 IAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVN 718
Query: 644 SRVHAFSVEDRN 655
R + F D++
Sbjct: 719 GRANVFLSGDKS 730
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 216/470 (45%), Gaps = 102/470 (21%)
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ LL YA ++EA+ +F+ + E N + + ML GYV+C M++A+ +F +MP K+VV
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVV 139
Query: 183 VWTKLISGYAKSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
WT +++ DG E A++LF M E N ++++++ R G
Sbjct: 140 SWTVMLTALCD--DGRSEDAVELFDEMPER-----NVVSWNTLVTGLIRNG--------- 183
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
+ A +V+D + + + + N++I G I +E
Sbjct: 184 --------------------------DMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGME 217
Query: 302 DAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
+A+L+F ++E N +++ SM+ GY YG V ++ RLF +MP ER
Sbjct: 218 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP-----------------ER 260
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRK--LAIDRTRSTFSVLFHACSCLGS--LQQG 417
N V+W +MISG+ N L+ +AL L++ M+K A+ T L +AC LG + G
Sbjct: 261 NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLG 320
Query: 418 QLLHAHLVKTPFESNVYVG---TSLVDMYSRCGSINDAQASFS---SISSPNV------- 464
+ LHA ++ +E+ + G SLV MY+ G I AQ+ + + S N+
Sbjct: 321 EQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLK 380
Query: 465 --------------------AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+WT++++GY G S A LF+ + ++D V T+
Sbjct: 381 NGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV----TWTV 436
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
++S V+ L E + M G+ P Y+ ++ G + +L + +
Sbjct: 437 MISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 58/271 (21%)
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSIS----YNSMIKGYAVYGQVDDSKRLFEKMPHR 344
+LI +S G + A + +++ + SI+ + S++ YA G +D+++ LFE MP R
Sbjct: 47 ALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER 106
Query: 345 SIISLNTMIS-------------------------------------------VIPEM-E 360
+I++ N M++ + EM E
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPE 166
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
RN V+WN++++G ++N EKA Q++ M R +++ + +++ +LL
Sbjct: 167 RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPS----RDVVSWNAMIKGYIENDGMEEAKLL 222
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
+ E NV TS+V Y R G + +A F + N+ +WTA+++G++ + L
Sbjct: 223 FGDMS----EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELY 278
Query: 481 SEAVLLF-EIMLEQDIV-PNAATFVGVLSAC 509
EA++LF E+ + D V PN T + + AC
Sbjct: 279 REALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 6 TQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAK 64
+Q+L+ + + S N I +NG L A LF+++ + VSW +M+ GY +
Sbjct: 356 ASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGD 415
Query: 65 -------------------------------FDESLSLVSTMHRSNVKLNETTFSTILSV 93
F E+ SL+S M R +K +T+S +LS
Sbjct: 416 VSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSS 475
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFE---FVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
++L GK IHC++ K+ C++ + + L+ YA C IE+A +F ++ + +
Sbjct: 476 AGATSNLDQGKHIHCVIAKT-TACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDT 534
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ W+ M++G L A ++F +M K + V + ++S + S + L+LF+
Sbjct: 535 VSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHS-GLITRGLELFK 593
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M+E+ P + S+I R G E + L F D ++ GAL+ CG
Sbjct: 594 AMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISAL---PFTPDHTVYGALLGL-CG 648
>gi|302782465|ref|XP_002973006.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
gi|300159607|gb|EFJ26227.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
Length = 698
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 201/652 (30%), Positives = 331/652 (50%), Gaps = 64/652 (9%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
+CGR L AR +FD MP+R SW ++ Y K E+L L T+ RS+ ++
Sbjct: 4 DCGR---LEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADA 60
Query: 87 F--STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
F S++L+ CA+L L G +IH ++K G + + + L+ YA C I+ AK+VFD
Sbjct: 61 FIFSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDR 120
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALK 203
+ + + W+ M+ + + A ++ +M DV+ W+ +IS A+++ G ++ AL+
Sbjct: 121 ITHRDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMIS--AEAMAGHDREALE 178
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
L+R M S PN T +V+ AC RLG G +V I+ G + D +G L+ Y
Sbjct: 179 LYREMILSVR--PNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLY 236
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIK 323
R D I E++F+ + + +S+N+M+
Sbjct: 237 A---------RFGDV---------------------IAAREVLFDSMKDRTVVSWNAMVT 266
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
+A +VD++++LF +MP +S+IS WN+MI+G+ QN ++AL
Sbjct: 267 AFAQNARVDEAEKLFREMPDKSVIS-----------------WNAMIAGFGQNGRPKQAL 309
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+L+ M + +R T+ + AC+ L + G+ + + ++ V S+ +MY
Sbjct: 310 ELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFI-CDGMDEALAKDISVANSICNMY 368
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
+CG A+ +F ++ +V +WTA++ YS +G SEA+ +F IM++ + PN T +
Sbjct: 369 GKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEALDIFRIMVQAGVEPNGITLI 428
Query: 504 GVLSACVRAGLVNEGMKIFRSMKS---YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
LSAC L +EG IF S+ S YGV H+ C +DLLGR+G+L +AE I M
Sbjct: 429 NTLSACSHGALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDLLGRAGYLKDAETLITKM 488
Query: 561 PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI---SAYVILSNIYAVLGKWG 617
P + AV W +LLSAC + +++ R A +F LD+ I + YV+LSNIYA G
Sbjct: 489 PFKAGAVAWTSLLSACRTFRDLKRAGRVANHLFELDESSIKDPAPYVMLSNIYASAGDRA 548
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+M +R ++ KK PG S I + + + F D +P + Y L L
Sbjct: 549 AEMKLRDQIRIKCRKKLPGKSTITIKGQTNEFYSLDETHPRRDDAYNELRRL 600
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 126/542 (23%), Positives = 225/542 (41%), Gaps = 83/542 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS N ++ G L A ++ +M V+ W+TM+ + E+L L M
Sbjct: 126 VVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYREMIL 185
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S V+ N +T +T+L+ C +L L G + ++SG + VG+ L+ YA ++
Sbjct: 186 S-VRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVIA 244
Query: 138 AKRV-FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+ V FD + + + W+ M+ + Q + +A +F +MP K V+ W +I+G+ ++
Sbjct: 245 AREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQN-G 303
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
++AL+LFR M G P+ T+ SV+ ACA L A G+ +
Sbjct: 304 RPKQALELFRRMDLEGLQ-PSRMTYCSVLDACANLTASSLGRFI---------------- 346
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
C+ D A+ ++ +NS+ N G E A F +T + +
Sbjct: 347 ---------CDGMDEAL-------AKDISVANSICNMYGKCGLPELARQTFLEMTYRDVV 390
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S+ ++I Y+ G ++ +F M V +E N +T + +S
Sbjct: 391 SWTAIIAAYSQNGYSSEALDIFRIM-------------VQAGVEPNGITLINTLSACSHG 437
Query: 377 NLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
L ++ ++ ++ + S F G L+ + L + K PF++
Sbjct: 438 ALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDLLGRAGYLKDAETL---ITKMPFKAGA 494
Query: 434 YVGTSLVDMYSRCGSINDAQASF-----------SSISSPNVAAWTALMNGYSHHG-LGS 481
TSL+ S C + D + + SSI P A + L N Y+ G +
Sbjct: 495 VAWTSLL---SACRTFRDLKRAGRVANHLFELDESSIKDP--APYVMLSNIYASAGDRAA 549
Query: 482 EAVLLFEIMLE-QDIVPNAATFV--GVLSACV--------RAGLVNEGMKIFRSMKSYGV 530
E L +I ++ + +P +T G + R NE ++F+ MK G
Sbjct: 550 EMKLRDQIRIKCRKKLPGKSTITIKGQTNEFYSLDETHPRRDDAYNELRRLFQKMKEAGY 609
Query: 531 VP 532
VP
Sbjct: 610 VP 611
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 1 MKLYATQSQTLMTQETL--------IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSW 52
+ LYA + +E L +VS N +T +N ++ A LF +MP ++V+SW
Sbjct: 233 VNLYARFGDVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISW 292
Query: 53 NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
N M+ G+ + + ++L L M ++ + T+ ++L CA L + G+ I C +
Sbjct: 293 NAMIAGFGQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFI-CDGMD 351
Query: 113 SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
V + + Y C E A++ F E+ + + W+ ++ Y Q S+A D+
Sbjct: 352 EALAKDISVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEALDI 411
Query: 173 FIKMPKKDV 181
F M + V
Sbjct: 412 FRIMVQAGV 420
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ--DIVPNA 499
MY CG + DA+A F S+ N +W +++ Y G EA+ L+ ++ +I +A
Sbjct: 1 MYRDCGRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADA 60
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
F VL+AC R + +G++I + GV + +V + + G + A++ + D
Sbjct: 61 FIFSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQ-VFD 119
Query: 560 MPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
D V W A++SA ++EV + Q+M D
Sbjct: 120 RITHRDVVSWNAMVSANAEAGHLEVALKIYQEMVSAD 156
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 202/669 (30%), Positives = 343/669 (51%), Gaps = 59/669 (8%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
Q+V AR LFD++P +V+ WN ++ Y+ FD ++ L +M V+ N+ T+ +L
Sbjct: 58 QVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLK 117
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
C+ L ++ DG +IH G E FV + L+ FYA C + EA+R+
Sbjct: 118 ACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRL----------- 166
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRES 211
F M +DVV W +I+G S+ G C+ A++L M+E
Sbjct: 167 --------------------FSSMSHRDVVAWNAMIAGC--SLYGLCDDAVQLIMQMQEE 204
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PN T V+ A GK +HG ++ F+ +G L++ Y C+
Sbjct: 205 GI-CPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLY 263
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-----EANSISYNSMIKGYA 326
A +++D + + +++I G ++ +++A +F+++ + ++ S+++ A
Sbjct: 264 ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACA 323
Query: 327 VYGQVDDSKRL----------FEKMPHRSIISLNTMISVIPEM-----ERNP---VTWNS 368
+ ++L + + +++S+ VI + E NP V++++
Sbjct: 324 KLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSA 383
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
++SG VQN AL ++ M+ ID +T + ACS L +LQ G H +L+
Sbjct: 384 IVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRG 443
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
F ++ + +L+DMYS+CG I+ A+ F+ + ++ +W A++ GY HGLG EA+ LF
Sbjct: 444 FATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFH 503
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
+L + P+ TF+ +LS+C +GLV EG F +M + + +VP +EH C+VD+LGR+
Sbjct: 504 DLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRA 563
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G + EA FI++MP E D +W ALLSAC N+E+GE ++K+ L + +V+LS
Sbjct: 564 GLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLS 623
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NIY+ G+W IR +KK PGCSWIE+N VHAF D+++ + I LE
Sbjct: 624 NIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLE 683
Query: 668 HLTANLNSV 676
L + +
Sbjct: 684 ELLVEMKRL 692
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 235/522 (45%), Gaps = 75/522 (14%)
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
+ + +L C Q SL + K+IH LK+ V L Y +C ++ A+R+FD
Sbjct: 8 KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA--KSVDGCEKA 201
E+ P V++W ++I YA DG A
Sbjct: 68 EI-------------------------------PNPSVILWNQIIRAYAWNGPFDG---A 93
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+ L+ M G PN+YT+ V++AC+ L A +G +H G E D + AL++
Sbjct: 94 IDLYHSMLHLGVR-PNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFN------------ 308
FY C A R++ + + + A N++I G G +DA +LI
Sbjct: 153 FYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSST 212
Query: 309 ------RLTEANSISYNSMIKGYAVYGQVDD-----SKRLFEKMPHRSIISLNTMISVIP 357
+ EA ++ + + GY V D+ + L + ++ + V+
Sbjct: 213 IVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG 272
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQ 416
RN V+W++MI GYV ++ ++AL+L+ M K A+D T T + AC+ L L +
Sbjct: 273 V--RNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSR 330
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ LH +++K ++ +G +L+ MY++CG I+DA F ++ + +++A+++G
Sbjct: 331 GRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQ 390
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC-----VRAGLVNEGMKIFRSMKSYGVV 531
+G + A+ +F +M I P+ T +GVL AC ++ G + G I R + ++
Sbjct: 391 NGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLI 450
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
++D+ + G + A E M D V W A++
Sbjct: 451 -----CNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMI 486
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 206/488 (42%), Gaps = 92/488 (18%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G LV A+ LF M R VV+WN M+ G S + D+++ L+ M + N +T +L
Sbjct: 158 GILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ +L GK +H ++ ++ VG+GLL YA C + A+++FD + NE+
Sbjct: 218 PTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV 277
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS M+ GYV + M +A ++F +M KD +
Sbjct: 278 SWSAMIGGYVASDCMKEALELFDQMILKDAMD---------------------------- 309
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P T SV+RACA+L G+ +H +IK G D +G L+ Y C D
Sbjct: 310 ----PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDD 365
Query: 272 AMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFN---------------------- 308
A+R +D + NP + S +++++G + G A IF
Sbjct: 366 AIRFFDEM-NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACS 424
Query: 309 -----------------RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
R +++ N++I Y+ G++ ++ +F +M I+S
Sbjct: 425 HLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVS--- 481
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
WN+MI GY + L +AL L+ + L + TF L +CS
Sbjct: 482 --------------WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHS 527
Query: 412 GSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTA 469
G + +G+L + + + +VD+ R G I++A ++ P+V W+A
Sbjct: 528 GLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSA 587
Query: 470 LMNGYSHH 477
L++ H
Sbjct: 588 LLSACRIH 595
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 1/183 (0%)
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
++ + L AC SL + + +H H +K ++ V L +Y C + A+ F
Sbjct: 7 VKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLF 66
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
I +P+V W ++ Y+ +G A+ L+ ML + PN T+ VL AC +
Sbjct: 67 DEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIE 126
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+G++I K +G+ + T +VD + G L EA+ M D V W A+++ C
Sbjct: 127 DGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIAGC 185
Query: 577 WFW 579
+
Sbjct: 186 SLY 188
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 74/156 (47%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I+ N ++ + G + A FD+M + VS++ ++ G + +LS+ M
Sbjct: 347 ILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQL 406
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S + + TT +L C+ L +L G H ++ G+ + + L+ Y+ C +I
Sbjct: 407 SGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISF 466
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
A+ VF+ + + + W+ M++GY L +A +F
Sbjct: 467 AREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 502
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+TLI N I + G++ AR +F++M +VSWN M+ GY E+L L
Sbjct: 447 DTLI--CNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHD 504
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
+ +K ++ TF +LS C+ +++G+
Sbjct: 505 LLALGLKPDDITFICLLSSCSHSGLVMEGR 534
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 324/616 (52%), Gaps = 65/616 (10%)
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
+E+LS + H+ +S+++S C L GK +H +K+ F+ +
Sbjct: 3 LNETLSSLDPAHQH--------YSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANR 54
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
L+ FY+ C I+ A +VF L N W++++ Y + L ++A ++ +MPK ++V +
Sbjct: 55 LIDFYSKCDSIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSY 114
Query: 185 TKLISGYAKSVDGCEK-ALKLFRWMRESGEN-MPNEYTFDSVIRACARLGAFCEGKVVHG 242
LISG G K +L +F+ M + N + +E+T S++ +CA LGA + VHG
Sbjct: 115 NSLISGLGH--HGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHG 172
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
I G + IG ALI+ Y C G +
Sbjct: 173 AAIIIGLNSNIIIGNALIDAYGKC-------------------------------GEPDI 201
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
+ IF+R+ E + +S+ SM+ YA +++D+ LF +M E+N
Sbjct: 202 SFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQM-----------------QEKN 244
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
V+W ++I+G+ QN ++AL L+ MR+ I + TF+ + AC+ L + +G+ +H
Sbjct: 245 TVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHG 304
Query: 423 HLVKTP---FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
H++++ + N+++ +L+DMY +CG + A F + ++ +W +L+ G++ +G
Sbjct: 305 HIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGH 364
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYT 538
G E++ +FE M+E DI PN TF+G+LSAC GLV+EG++I SM K YGV P +HY
Sbjct: 365 GEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYA 424
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAV-VWGALLSACWFWMNMEVGERAAQKMFGLDK 597
++DLLGR+ L EA IK P D V +WGALL AC NM++ RAA+ +F L+
Sbjct: 425 IMIDLLGRNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEP 484
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+ YV++ NIYA +W + +R+ + ++K+ CSWIE+ + H F ++R++
Sbjct: 485 GNAARYVMVYNIYAAASRWDEARQVRRLMMERGLRKEAACSWIEVRNTRHQFVAKERSHC 544
Query: 658 NCNVIYATLEHLTANL 673
N +Y + +L +
Sbjct: 545 QINEVYEVIHNLVDQM 560
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 169/331 (51%), Gaps = 11/331 (3%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-- 77
S N I+ R+G A NL DQMP +VS+N+++ G ESL++ TM +
Sbjct: 82 SWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTMLKQC 141
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
SNV +E T +++ CA L + +Q+H + G +G+ L+ Y C E +
Sbjct: 142 SNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDI 201
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+ +F + E + + W+ M+ Y Q + + DA +F +M +K+ V WT LI+G+A++ G
Sbjct: 202 SFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRG 261
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC---GFEFDES 254
++AL LF MRE G P+ +TF SV+ ACA L GK +HG +I+ + +
Sbjct: 262 -DEALHLFEQMREEGIP-PSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIF 319
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA- 313
I ALI+ YC C A ++ + + + NSLI G G E++ +F R+ EA
Sbjct: 320 ILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEAD 379
Query: 314 ---NSISYNSMIKGYAVYGQVDDSKRLFEKM 341
N +++ ++ G V + R+ + M
Sbjct: 380 IRPNHVTFLGLLSACCHTGLVSEGLRILDSM 410
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS + + +L A LF QM + VSW ++ G+++ + DE+L L
Sbjct: 211 ERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQ 270
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS---GYECFEFVGSGLLFFYAN 131
M + + TF+++LS CA L + GK+IH +++S Y C F+ + L+ Y
Sbjct: 271 MREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCK 330
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C ++ A +F +HE + + W+ ++ G+ Q ++ VF +M + D+
Sbjct: 331 CGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADI---------- 380
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
PN TF ++ AC G EG
Sbjct: 381 -----------------------RPNHVTFLGLLSACCHTGLVSEG 403
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 194/607 (31%), Positives = 308/607 (50%), Gaps = 84/607 (13%)
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
+ +H + + + TF ++ CA+L G + V K G+ FV + + F++
Sbjct: 110 ALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVR 169
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
+ A+R+FDE P +DVV W LI GY
Sbjct: 170 GPMAFARRLFDE-------------------------------SPVRDVVSWNTLIGGYV 198
Query: 193 KSVDGCEK-ALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
+S G + AL+LF + E G + P+E T + CA++G GK +H + G
Sbjct: 199 RS--GLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVR 256
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
+ A+++ Y C G +E A +F R+
Sbjct: 257 CTVRLMNAVMDMYVKC-------------------------------GSLELANSVFERI 285
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
+ ++S+ +MI G+A G ++D++ LF++MP ER+ WN+++
Sbjct: 286 SNRTAVSWTTMIVGHARLGMMEDARMLFDEMP-----------------ERDVFPWNALM 328
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
+GYVQN ++A+ L+ M+K +D T L ACS LG+L+ G +H ++ +
Sbjct: 329 AGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLH 388
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+V +GTSLVDMY++CG+I A F+ I N WT+++ G ++HG EA+ F+ M
Sbjct: 389 LSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRM 448
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGH 549
++ + P+ TF+GVLSAC AGLV G + F M + Y + ++HY+C++DLLGR+GH
Sbjct: 449 IDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGH 508
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
L EAE+ + MP++ DAVVWGAL AC N+ +GE+AA K+ LD YV+L+N+
Sbjct: 509 LDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANM 568
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
YA K +R + HL V+K PGCS IELN VH F V+D+++ + N IY L +
Sbjct: 569 YAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTNAIYDCLHEI 628
Query: 670 TANLNSV 676
T + +
Sbjct: 629 TLQMRHI 635
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 210/436 (48%), Gaps = 30/436 (6%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ N A+ G + AR LFD+ P+R VVSWNT++ GY + E+L L +
Sbjct: 156 VFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAE 215
Query: 78 SN--VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
V+ +E T +S CAQ+ L GK++H V G C + + ++ Y C +
Sbjct: 216 DGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSL 275
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
E A VF+ + + W+ M+VG+ + +M DA +F +MP++DV W L++GY ++
Sbjct: 276 ELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNK 335
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
G E A+ LF M++S + PNE T +++ AC++LGA G VH + + ++
Sbjct: 336 QGKE-AIALFHEMQKSKVD-PNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVAL 393
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRLT-- 311
G +L++ Y C A+ V++ E P NA S+I GL + G ++A F R+
Sbjct: 394 GTSLVDMYAKCGNIKKAICVFN--EIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDL 451
Query: 312 --EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ + I++ ++ G V+ ++ F M + +ER ++ M
Sbjct: 452 GLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKY------------HLERKMKHYSCM 499
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TP 428
I + ++A QL M +D + LF AC G++ G+ LV+ P
Sbjct: 500 IDLLGRAGHLDEAEQLVNAM---PMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDP 556
Query: 429 FESNVYVGTSLVDMYS 444
+S +YV L +MY+
Sbjct: 557 SDSGIYV--LLANMYA 570
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 200/616 (32%), Positives = 318/616 (51%), Gaps = 68/616 (11%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
N T L CA +L GKQ+H L++ G+ + L+ Y+ C ++ EA VF
Sbjct: 10 NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69
Query: 143 -DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
D HE N ++ ++ G+V L S F
Sbjct: 70 YDPCHERNVFAYNAIISGFVSNGLASKGF------------------------------- 98
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+ ++ MR G MP++YTF V+R C + E K +HG L+K G E D +G AL+
Sbjct: 99 -QFYKKMRLEGV-MPDKYTFPCVVRTCCEV---MEVKKIHGCLLKMGLELDVFVGSALVN 153
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSIS 317
Y + + A +V+ L + N++ING +G +++A +F R+ + +
Sbjct: 154 TYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFT 213
Query: 318 YNSMIKGYAVYGQVDDSKR---LFEKMPHRSIISL-NTMIS------------VIPEM-- 359
++ +A G +D+ K + KM + S +S+ N +I +I EM
Sbjct: 214 ITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMIN 273
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
E++ +WNS+IS + Q H+ L+L+ M I T + + ACS L +L G+
Sbjct: 274 EKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGRE 333
Query: 420 LHAHLV--------KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
+H +++ + N+ V +++DMY++CGS+N+A F S+S +VA+W ++
Sbjct: 334 IHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMI 393
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGV 530
GY HG EA+ +F M E + PN T VGVLSAC AG V+ G M+S +GV
Sbjct: 394 MGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGV 453
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
+PT+EHYTCV+D+LGR+GHL +A E ++ MPI+ + VVW ALL AC N E+ E AA+
Sbjct: 454 IPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAAR 513
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
++ L+ + +YV++SN+Y V+G++ + +++RK + VKK PGCSWIEL VH F
Sbjct: 514 QVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFR 573
Query: 651 VEDRNNPNCNVIYATL 666
DR + N + L
Sbjct: 574 TGDRTHSELNALTNQL 589
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 200/463 (43%), Gaps = 70/463 (15%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+NG + A+ +F ++ IR VV WN M+ GY+K DE+L + MH V + T +
Sbjct: 157 KNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITG 216
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
ILSV A L +GK +H +V+K GY+ V + L+ Y C I +A +F+ ++E
Sbjct: 217 ILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINE-- 274
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
KD+ W +IS + + D + L+LF M
Sbjct: 275 -----------------------------KDIFSWNSIISVHEQCGDH-DGTLRLFDKML 304
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG--------ALIE 261
SG +P+ T +V+ AC+ L A G+ +HG +I G D+ G A+++
Sbjct: 305 GSGI-LPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMD 363
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSIS 317
Y C + + A++++D + + + N +I G G +A +F+++ EA N ++
Sbjct: 364 MYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVT 423
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM-ISGYVQN 376
++ G V RLF + + + VIP +E + + +G++++
Sbjct: 424 LVGVLSACNHAGFVSHG-RLF-------LAQMESTFGVIPTIEHYTCVIDMLGRAGHLED 475
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYV 435
Y ++K+ I + L AC G+ + ++ +++ P YV
Sbjct: 476 --------AYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYV 527
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNV-----AAWTALMNG 473
S ++Y G + ++ NV +W L +G
Sbjct: 528 LMS--NVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDG 568
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 41/236 (17%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M ++ + +N I G+ + A +F+ + + + SWN+++ + + D +L L
Sbjct: 240 MGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRL 299
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE--------FVGS 123
M S + + T +T+L C+ L +L+ G++IH ++ +G + V +
Sbjct: 300 FDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSN 359
Query: 124 GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
++ YA C + A ++FD + + + W++M++GY
Sbjct: 360 AVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYG---------------------- 397
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
+ GYA +AL +F M E+ E PNE T V+ AC G G++
Sbjct: 398 ----MHGYAL------EALGMFSQMCEA-EFKPNEVTLVGVLSACNHAGFVSHGRL 442
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 32/176 (18%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+ L+VS N + + G + A +FD M + V SWN M+ GY E+L + S
Sbjct: 353 DNLLVS-NAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQ 411
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M + K NE T +LS C FV G LF +
Sbjct: 412 MCEAEFKPNEVTLVGVLSACNHAG---------------------FVSHGRLFLA----Q 446
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLIS 189
+E V + ++ L G+++ DA+++ KMP + + VVW L+
Sbjct: 447 MESTFGVIPTIEHYTCVIDMLGRAGHLE-----DAYEIVQKMPIQANPVVWRALLG 497
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 193/611 (31%), Positives = 327/611 (53%), Gaps = 41/611 (6%)
Query: 30 RNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
R G+L AR++ D+MP + +N M+ GY+K +FD+++ L+ M ++ +++
Sbjct: 123 RAGELELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDL----FSWN 178
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+ L+ Q ++ Q +++ + + G + +++ A F +
Sbjct: 179 SALAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEG----FVRAGDLDAAASFFGRIESP 234
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N + W +L GY + +SDA D+F +MP+++VV ++ GY + + E+A KLF
Sbjct: 235 NVVSWVTLLNGYCRAGRISDARDLFDRMPERNVVACNVMLDGYVR-LSRLEEACKLF--- 290
Query: 209 RESGENMP--NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
+ MP N ++ ++I AR G E K LL K F + AL+ Y
Sbjct: 291 ----DEMPGKNSISWTTIISGLARAGKLQEAK---DLLDKMSFNC-VAAKTALMHGYLQR 342
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
+ A +++D +E N++I+G + G +E+A L+F R+ +++S+N+MI GYA
Sbjct: 343 NMVNDARQIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYA 402
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
GQ+ + +F +M + N V+WNS+ISG+VQN L A +
Sbjct: 403 QGGQMRKAIGIFRRMSRK-----------------NTVSWNSVISGFVQNGLFVDAFHHF 445
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
M MR+ ST++ AC+ L +L G+ LH+ LV++ ++++ +L+ Y++C
Sbjct: 446 MLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKC 505
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G + +A+ F + ++ +W AL++GY+ +G G+EA+ +F M + P+ TFVG+L
Sbjct: 506 GRMLEAKQIFDEMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGIL 565
Query: 507 SACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
SAC RAGL++EG+ F SM + Y + P EHY C+ DLLGR+G L+EA E ++ M I+ +
Sbjct: 566 SACSRAGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPN 625
Query: 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKR 625
A VWGALL AC + N E+ AA+K+ L+ S YV+LSNI A GKW + R
Sbjct: 626 AGVWGALLGACQMYKNHELARLAAEKLSELEPCRASNYVLLSNISAEAGKWDEAEKARAS 685
Query: 626 LTHLEVKKDPG 636
+ K PG
Sbjct: 686 IKEKGANKPPG 696
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 149/306 (48%), Gaps = 35/306 (11%)
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A R++D + NS+++ L GRI++A +F+ + N++S+N+MI + +G+V
Sbjct: 37 ARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPSRNAVSWNAMIAALSDHGRV 96
Query: 332 DDSKRLFEKMPHRSIISLNTMIS-------------VIPEMERNPVT--WNSMISGYVQN 376
D++ LF++MP R S M+S V+ M + T +N+MISGY +N
Sbjct: 97 ADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRMPGDKCTACYNAMISGYAKN 156
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL-QQGQLLHA-HLVKTPFESNVY 434
+ A++L M A D LF S L L Q GQ++ A E ++
Sbjct: 157 GRFDDAVKLLREMP--APD--------LFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMV 206
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+++ + R G ++ A + F I SPNV +W L+NGY G S+A LF+ M E++
Sbjct: 207 SWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDARDLFDRMPERN 266
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
+V +L VR + E K+F M + +T ++ L R+G L EA+
Sbjct: 267 VVACNV----MLDGYVRLSRLEEACKLFDEMPGKNSIS----WTTIISGLARAGKLQEAK 318
Query: 555 EFIKDM 560
+ + M
Sbjct: 319 DLLDKM 324
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 35/229 (15%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES 68
Q + ++T VS N I + GQ+ A +F +M + VSWN+++ G+ + F ++
Sbjct: 384 QRMPNKDT--VSWNTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDA 441
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
M R + + +T+++ L CA L +L G+Q+H L+++SG+ F + L+
Sbjct: 442 FHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALIST 501
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
YA C + EAK++FDE+ + + W+ ++ GY ++A VF +M V
Sbjct: 502 YAKCGRMLEAKQIFDEMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGV------- 554
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
P+E TF ++ AC+R G EG
Sbjct: 555 --------------------------RPDEVTFVGILSACSRAGLIDEG 577
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 212/666 (31%), Positives = 335/666 (50%), Gaps = 72/666 (10%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
LFD M +R +VSWN M+ GY + ++L L M VK + T + CA+L S
Sbjct: 211 LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGS 270
Query: 100 LIDGKQIHCLVLKSGYECFEFVG-----SGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
L GKQIH L +K FEFV + LL Y+N +E + ++F+ +
Sbjct: 271 LKLGKQIHQLAIK-----FEFVEDLYILNALLNMYSNNGSLESSHQLFESV--------- 316
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGE 213
P +D +W +IS YA GC E+A+ LF M+ G
Sbjct: 317 ----------------------PNRDAPLWNSMISAYAAF--GCHEEAMDLFIRMQSEGV 352
Query: 214 NMPNEYTFDSVIRACARLGA-FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+E T ++ C L + +GK +H +IK G D S+G AL+ Y +
Sbjct: 353 K-KDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESV 411
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVY 328
+++DR++ + + N++I L A +F R+ E+ NS + S++
Sbjct: 412 QKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDV 471
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNSMI 370
+D + + + SI + + + +M +R+ ++WN+MI
Sbjct: 472 TCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMI 531
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
+ YV+NN KAL L+ M A + + +VL + + L +L QGQ LHA++ + F
Sbjct: 532 ASYVKNNQAHKALLLFHRMISEAEPNSVTIINVL-SSFTHLATLPQGQSLHAYVTRRGFS 590
Query: 431 S--NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
++ + + + MY+RCGS+ A+ F ++ N+ +W A++ GY +G GS+A+L F
Sbjct: 591 LGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFS 650
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
MLE PN TFV VLSAC +G + G+++F SM + + V P L HY+C+VDLL R
Sbjct: 651 QMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARG 710
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G + EA EFI MPIE DA VW ALLS+C + + + + +K+ L+ YV+LS
Sbjct: 711 GCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLS 770
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
N+YA G W + IR L ++K PG SWI + ++VH FS DR++P + IYA L
Sbjct: 771 NVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLS 830
Query: 668 HLTANL 673
L +++
Sbjct: 831 ILLSSM 836
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 144/575 (25%), Positives = 257/575 (44%), Gaps = 72/575 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD M R VV WN M+ GY W ++E++ LV M R N++ N T +L
Sbjct: 102 GFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALL 161
Query: 92 SVCAQLNSLIDGKQIHCLVLKSG-YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
C + L G+ +H L++G ++ V + L+ FY F++ +FD + N
Sbjct: 162 LACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLR-FDMRVLPLLFDLMVVRNI 220
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W+ M+ GY D D F KAL+LF M
Sbjct: 221 VSWNAMISGYY------DVGDYF--------------------------KALELFVQM-- 246
Query: 211 SGENMPNEYTFDSV-----IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
+ +E FD V ++ACA LG+ GK +H L IK F D I AL+ Y
Sbjct: 247 ----LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSN 302
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-------EANSISY 318
+ + + ++++ + N NS+I+ + G E+A +F R+ E +
Sbjct: 303 NGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIM 362
Query: 319 NSM--------IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER--------N 362
SM +KG +++ V S + +++S+ T ++ + +++ +
Sbjct: 363 LSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVD 422
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
++WN+MI +N L +A +L+ MR+ I T + AC + L G+ +H
Sbjct: 423 IISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHG 482
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+++K E N + T+L DMY CG A+ F ++ +W A++ Y + +
Sbjct: 483 YVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHK 542
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI--FRSMKSYGVVPTLEHYTCV 540
A+LLF M+ + PN+ T + VLS+ + +G + + + + + + L
Sbjct: 543 ALLLFHRMISE-AEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAF 601
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + R G L AE K +P + + + W A+++
Sbjct: 602 ITMYARCGSLQSAENIFKTLP-KRNIISWNAMIAG 635
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 234/528 (44%), Gaps = 64/528 (12%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
NG L ++ LF+ +P R WN+M+ Y+ + +E++ L M VK +E T +
Sbjct: 303 NGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIM 362
Query: 91 LSVCAQLNS-LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
LS+C +L S L+ GK +H V+KSG +G+ LL Y +E +++FD
Sbjct: 363 LSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFD------ 416
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+M D++ W +I A++ + A +LF MR
Sbjct: 417 -------------------------RMKGVDIISWNTMILALARNTLRAQ-ACELFERMR 450
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
ES E PN YT S++ AC + G+ +HG ++K E ++ + AL + Y C
Sbjct: 451 ES-EIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDE 509
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---TEANSISYNSMIKGYA 326
A +++ + L + N++I + + A L+F+R+ E NS++ +++ +
Sbjct: 510 ATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEAEPNSVTIINVLSSFT 569
Query: 327 VYGQVDDSKRLFEKMPHR----------------------SIISLNTMISVIPEMERNPV 364
+ + L + R S+ S + +P +RN +
Sbjct: 570 HLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP--KRNII 627
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAH 423
+WN+MI+GY N A+ + M + TF + ACS G ++ G QL H+
Sbjct: 628 SWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSM 687
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSE 482
+ + + +VD+ +R G I++A+ S+ P+ + W AL++ + +
Sbjct: 688 VQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQ 747
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
A +FE + + + + NA +V + + AGL E +I +K G+
Sbjct: 748 AKTIFEKLDKLEPM-NAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGL 794
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 140/580 (24%), Positives = 246/580 (42%), Gaps = 105/580 (18%)
Query: 43 QMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLID 102
++ I+ WN+++ + LS + M V N TT +L CA N++
Sbjct: 12 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
GK IH + + VG+ ++ FY C G+V+
Sbjct: 72 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKC--------------------------GFVE 105
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENM-PNEYT 220
DA VF M +DVV+W ++ GY GC E+A+ L R M EN+ PN T
Sbjct: 106 -----DARCVFDAMSDRDVVLWNAMVYGYVGW--GCYEEAMLLVREMGR--ENLRPNSRT 156
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGALIEFYCGCEAFDGAMRV---- 275
+++ AC G+ VHG ++ G F+ + + ALI FY FD MRV
Sbjct: 157 MVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYL---RFD--MRVLPLL 211
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDA----------ELIFNRLT---------EANSI 316
+D + + + N++I+G +G A E+ F+ +T E S+
Sbjct: 212 FDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSL 271
Query: 317 S--------------------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
N+++ Y+ G ++ S +LFE +P+
Sbjct: 272 KLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPN------------- 318
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS-LQ 415
R+ WNSMIS Y HE+A+ L++ M+ + + T ++ C L S L
Sbjct: 319 ----RDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLL 374
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+G+ LHAH++K+ + +G +L+ MY+ + Q F + ++ +W ++ +
Sbjct: 375 KGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALA 434
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
+ L ++A LFE M E +I PN+ T + +L+AC ++ G I + + +
Sbjct: 435 RNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQP 494
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
T + D+ G A + + P + D + W A++++
Sbjct: 495 LRTALADMYMNCGDEATARDLFEGCP-DRDLISWNAMIAS 533
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N IT R G L +A N+F +P R ++SWN M+ GY + +++ S M
Sbjct: 598 ANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGF 657
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG-SGLLFFYANCFEIEEAK 139
+ N TF ++LS C+ + G Q+ +++ E V S ++ A I+EA+
Sbjct: 658 RPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAR 717
Query: 140 RVFDELH-EDNELLWSLMLVGYVQCNLMSDA------FDVFIKMPKKDVVVWTKLISGYA 192
D + E + +W +L C SDA F+ K+ + + L + YA
Sbjct: 718 EFIDSMPIEPDASVWRALL---SSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYA 774
Query: 193 KSVDGCEKALKLFR-WMRESGENMP 216
+ G ++ R W++E G P
Sbjct: 775 TA--GLWLEVRRIRTWLKEKGLRKP 797
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 206/666 (30%), Positives = 343/666 (51%), Gaps = 59/666 (8%)
Query: 36 TARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET-TFSTILSV 93
+AR++F+ IR+ V WN+++ GYSK + F ++L + + ++ + ++ TF ++
Sbjct: 57 SARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA 116
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
L G+ IH LV+KSGY C V S L+ YA E + +VFDE
Sbjct: 117 YGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDE--------- 167
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
MP++DV W +IS + +S + EKAL+LF M SG
Sbjct: 168 ----------------------MPERDVASWNTVISCFYQSGEA-EKALELFGRMESSGF 204
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
PN + I AC+RL GK +H +K GFE DE + AL++ Y C+ + A
Sbjct: 205 E-PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR 263
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNS--------- 320
V+ ++ L A NS+I G ++ G + I NR+ T + + S
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSR 323
Query: 321 -MIKGYAVYGQVDDSKRLFEKMPHRSIISL-------NTMISVIPEMERNPV-TWNSMIS 371
++ G ++G V S + + S+I L N +V + +++ +WN MIS
Sbjct: 324 NLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMIS 383
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
Y+ KA+++Y M + + TF+ + ACS L +L++G+ +H + ++ E+
Sbjct: 384 SYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLET 443
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+ + ++L+DMYS+CG+ +A F+SI +V +WT +++ Y HG EA+ F+ M
Sbjct: 444 DELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQ 503
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHL 550
+ + P+ T + VLSAC AGL++EG+K F M+S YG+ P +EHY+C++D+LGR+G L
Sbjct: 504 KFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRL 563
Query: 551 HEAEEFIKDMPIELD-AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
EA E I+ P D A + L SAC + +G+R A+ + S Y++L N+
Sbjct: 564 LEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNL 623
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
YA W +R ++ + ++K PGCSWIE++ +V F EDR++ +Y L L
Sbjct: 624 YASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALL 683
Query: 670 TANLNS 675
+ ++ S
Sbjct: 684 SGHMES 689
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 219/474 (46%), Gaps = 66/474 (13%)
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVDGCEKALK 203
L D L SL+ V Y C A VF + DV +W L+SGY+K+ L+
Sbjct: 35 LRRDVVLCKSLINV-YFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKN-SMFHDTLE 92
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
+F+ + +P+ +TF +VI+A LG G+++H L++K G+ D + +L+ Y
Sbjct: 93 VFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMY 152
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYN 319
F+ +++V+D + + + N++I+ G E A +F R+ E NS+S
Sbjct: 153 AKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLT 212
Query: 320 SMI---------------------KGYAV-----------YGQVD---DSKRLFEKMPHR 344
I KG+ + YG+ D ++ +F+KMP +
Sbjct: 213 VAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK 272
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR---STF 401
S+ V WNSMI GYV + +++ + ++ I+ TR +T
Sbjct: 273 SL-----------------VAWNSMIKGYVAKGDSKSCVEI---LNRMIIEGTRPSQTTL 312
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
+ + ACS +L G+ +H +++++ +++YV SL+D+Y +CG N A+ FS
Sbjct: 313 TSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQK 372
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+W +++ Y G +AV +++ M+ + P+ TF VL AC + + +G +I
Sbjct: 373 DVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQI 432
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
S+ + + ++D+ + G+ EA +P + D V W ++SA
Sbjct: 433 HLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISA 485
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 174/407 (42%), Gaps = 85/407 (20%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ L AR +F +MP +++V+WN+M+ GY + +++ M + ++TT +
Sbjct: 254 GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLT 313
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+IL C++ +L+ GK IH V++S +V L+ Y C E A+ VF + +D
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
W++M+ Y+ SV KA++++ M
Sbjct: 374 VAESWNVMISSYI--------------------------------SVGNWFKAVEVYDQM 401
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
G P+ TF SV+ AC++L A +GK +H + + E DE + AL++ Y C
Sbjct: 402 VSVGVK-PDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC-- 458
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
G ++A IFN + + + +S+ MI Y +
Sbjct: 459 -----------------------------GNEKEAFRIFNSIPKKDVVSWTVMISAYGSH 489
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
GQ ++ F++M ++ + VT +++S L ++ L+ +
Sbjct: 490 GQPREALYQFDEMQKFG-------------LKPDGVTLLAVLSACGHAGLIDEGLKFFSQ 536
Query: 389 MR-KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV--KTPFESN 432
MR K I+ +S + LG + G+LL A+ + +TP S+
Sbjct: 537 MRSKYGIEPIIEHYSCMI---DILG--RAGRLLEAYEIIQQTPETSD 578
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
S+L + SL++ +L+H ++ +V + SL+++Y C A+ F +
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 461 -SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI-VPNAATFVGVLSACVRAGLVNEG 518
+V W +LM+GYS + + + + +F+ +L I VP++ TF V+ A G G
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
I + G V + + +V + + + + +MP E D W ++S C++
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTVIS-CFY 184
Query: 579 WMNMEVGE-RAAQKMFG 594
+ GE A ++FG
Sbjct: 185 ----QSGEAEKALELFG 197
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 203/697 (29%), Positives = 333/697 (47%), Gaps = 90/697 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM--HRSN 79
N I G+ G + A +F+ MP R +VSWN+++CG+S+ ES + M +
Sbjct: 140 NALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEES 199
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ T T+L VCA + G +H L +K G
Sbjct: 200 FVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLN----------------------- 236
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+EL +N L+ Y +C +S+A +F K KK++V W +I GYA+ D C
Sbjct: 237 ---EELMVNNSLIDM-----YSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCR 288
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
L + E + +E+T +V+ C K +HG + G + +E + A
Sbjct: 289 TFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAF 348
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA------ 313
I Y C A + RV+D ++ +++ N+L+ G A ++ ++T++
Sbjct: 349 IAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDW 408
Query: 314 -------------NSISYNSMIKGYAVY--------------------GQVDDSKRLFEK 340
S+ Y I G+A+ G+ ++ LF+
Sbjct: 409 FTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDG 468
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
M HRS++S WN MI+GY QN L ++A+ L+ M I
Sbjct: 469 MEHRSLVS-----------------WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIA 511
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ ACS L +L+ G+ LH +K +++V +S++DMY++ G I +Q F +
Sbjct: 512 IMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR 571
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+VA+W ++ GY HG G EA+ LFE ML + P+ TF G+L AC AGLV +G++
Sbjct: 572 EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLE 631
Query: 521 IFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
F M + + + P LEHYTCVVD+LGR+G + +A I++MP + D+ +W +LLS+C
Sbjct: 632 YFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIH 691
Query: 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSW 639
N+ +GE+ A K+ L+ + YV++SN++A GKW +R R+ + ++KD GCSW
Sbjct: 692 GNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSW 751
Query: 640 IELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
IE+ +VH F + D P + T L ++S+
Sbjct: 752 IEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSI 788
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 141/623 (22%), Positives = 258/623 (41%), Gaps = 91/623 (14%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HR 77
V + IT G +R +FD++ + + WN ++ Y++ F++++S+ S +
Sbjct: 35 VLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISV 94
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ K + T ++ CA L L G+ IH + K FVG+ L+ Y C +EE
Sbjct: 95 TEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEE 154
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +VF+ + E N + W+ ++ G+ + + ++F+ F +M + G V
Sbjct: 155 AVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREM-----------LVGEESFV-- 201
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
P+ T +V+ CA +G VHGL +K G + +
Sbjct: 202 ------------------PDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING------------LISMGRIEDAEL 305
+LI+ Y C A ++D+ + + + NS+I G L+ + EDA++
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKM 303
Query: 306 IFNRLT-----------------------------EANSISYNSMIKGYAVYGQVDDSKR 336
+ T ++N + N+ I Y G + S+R
Sbjct: 304 KADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSER 363
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F+ M +++ S WN+++ GY QN+ KAL LY+ M +D
Sbjct: 364 VFDLMDTKTVSS-----------------WNALLCGYAQNSDPRKALDLYLQMTDSGLDP 406
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
T L ACS + SL G+ +H ++ + ++G SL+ +Y CG AQ F
Sbjct: 407 DWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLF 466
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+ ++ +W ++ GYS +GL EA+ LF ML I P + V AC + +
Sbjct: 467 DGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALR 526
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
G ++ + + + ++D+ + G + ++ I D E D W +++
Sbjct: 527 LGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQR-IFDRLREKDVASWNVIIAGY 585
Query: 577 WFWMNMEVGERAAQKMFGLDKKP 599
+ +KM L KP
Sbjct: 586 GIHGRGKEALELFEKMLRLGLKP 608
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 196/459 (42%), Gaps = 57/459 (12%)
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L C Q + G+++H +V S C +FV
Sbjct: 3 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFV--------------------------- 35
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
L + ++ Y C SD+ VF K+ +K++ W ++S Y ++ + E A+ +F +
Sbjct: 36 ---LNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRN-ELFEDAMSIFSEL 91
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
E+ P+ +T VI+ACA L G+++HG+ K D +G ALI Y C
Sbjct: 92 ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 151
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS------------- 315
+ A++V++ + L + NS+I G G ++++ F +
Sbjct: 152 VEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVL 211
Query: 316 ---ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPV 364
+ KG AV+G E M + S+I + + + E + +N V
Sbjct: 212 PVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIV 271
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL--GSLQQGQLLHA 422
+WNSMI GY + + L M+ F++L CL LQ + LH
Sbjct: 272 SWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHG 331
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+ + +SN V + + Y+RCG++ ++ F + + V++W AL+ GY+ + +
Sbjct: 332 YSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRK 391
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
A+ L+ M + + P+ T +L AC R ++ G +I
Sbjct: 392 ALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEI 430
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
+T++ + S+ I + G + ++ +FD++ + V SWN ++ GY + E+L L
Sbjct: 540 LTEDIFVSSS--IIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALEL 597
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
M R +K ++ TF+ IL C+ + DG
Sbjct: 598 FEKMLRLGLKPDDFTFTGILMACSHAGLVEDG 629
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 299/549 (54%), Gaps = 28/549 (5%)
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
+EA+++FDE+ E N + W+ ++ GY++ ++ +A +VF MP+++VV WT ++ GY +
Sbjct: 65 KEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQE- 123
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL-IKCGFEFDES 254
+A LF M E NE ++ + G + + ++ ++ +K
Sbjct: 124 GMVGEAESLFWRMPER-----NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNM 178
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
IGG C D A ++D + + ++I G R++ A +F + E
Sbjct: 179 IGG-----LCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKT 233
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------E 360
+S+ SM+ GY + G+++D++ FE MP + +I+ N MI E+ +
Sbjct: 234 EVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMED 293
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
R+ TW MI Y + +AL L+ M+K + + + + C+ L SLQ G+ +
Sbjct: 294 RDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HAHLV+ F+ +VYV + L+ MY +CG + A+ F SS ++ W ++++GY+ HGLG
Sbjct: 354 HAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLG 413
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTC 539
EA+ +F M +PN T + +L+AC AG + EG++IF SM+S + V PT+EHY+C
Sbjct: 414 EEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
VD+LGR+G + +A E I+ M I+ DA VWGALL AC +++ E AA+K+F +
Sbjct: 474 TVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDN 533
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED-RNNPN 658
YV+LS+I A KWG +RK + V K PGCSWIE+ +VH F+ +N+P
Sbjct: 534 AGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPE 593
Query: 659 CNVIYATLE 667
+I LE
Sbjct: 594 QAMILMMLE 602
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 203/490 (41%), Gaps = 96/490 (19%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS N ++ +N +V ARN+F+ MP R VVSW M+ GY + E+ SL
Sbjct: 76 ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLV-LKSGYECFEFVGSGLLFFYANCF 133
M N E +++ + + ++++ ++ +K +G GL C
Sbjct: 136 MPERN----EVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIG-GL------CR 184
Query: 134 E--IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
E ++EA+ +FDE+ E N + W+ M+ GY Q N + A +F MP+K V WT ++ GY
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGY 244
Query: 192 A-----------------KSVDGC-------------EKALKLFRWMRE----SGENMPN 217
K V C KA ++F M + + M
Sbjct: 245 TLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIK 304
Query: 218 EY-----------------------TFDSVI---RACARLGAFCEGKVVHGLLIKCGFEF 251
Y +F S+I CA L + G+ VH L++C F+
Sbjct: 305 AYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD 364
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL- 310
D + L+ Y C A V+DR + + NS+I+G S G E+A IF+ +
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424
Query: 311 ---TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
T N ++ +++ + G++++ +FE S+ + V P +E T +
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFE--------SMESKFCVTPTVEHYSCTVD 476
Query: 368 SM-ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+ +G V +KA++L +M I + + L AC L ++ L +
Sbjct: 477 MLGRAGQV-----DKAMELIESM---TIKPDATVWGALLGACKTHSRLDLAEVAAKKLFE 528
Query: 427 T-PFESNVYV 435
P + YV
Sbjct: 529 NEPDNAGTYV 538
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 49/325 (15%)
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A + +D L+ + + NS+++G S G ++A +F+ ++E N +S+N ++ GY +
Sbjct: 36 ARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMI 95
Query: 332 DDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ERNPVTWNSMISGYVQNN 377
+++ +FE MP R+++S M+ S+ M ERN V+W M G + +
Sbjct: 96 VEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDG 155
Query: 378 LHEKALQLYMTM----------------RKLAIDRTRSTF------SVLFHACSCLGSLQ 415
+KA +LY M R+ +D R F +V+ G Q
Sbjct: 156 RIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQ 215
Query: 416 QGQL-LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
++ + L + E TS++ Y+ G I DA+ F + V A A++ G+
Sbjct: 216 NNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGF 275
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
G S+A +F++M ++D AT+ G++ A R G E + +F M+ GV P+
Sbjct: 276 GEVGEISKARRVFDLMEDRD----NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSF 331
Query: 535 EHYTCVVDL--------LGRSGHLH 551
++ + GR H H
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAH 356
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 17/181 (9%)
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
SR G IN+A+ F S+ + +W ++++GY +GL EA LF+ M E+++V ++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVV----SWN 83
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
G++S ++ ++ E +F M VV +T +V + G + EAE MP E
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVS----WTAMVKGYMQEGMVGEAESLFWRMP-E 138
Query: 564 LDAVVWGALLSACWFWMNMEVGE-RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
+ V W + ++ G A+K++ D P+ V +N+ L + G+ +
Sbjct: 139 RNEVSWTVMFGGL-----IDDGRIDKARKLY--DMMPVKDVVASTNMIGGLCREGRVDEA 191
Query: 623 R 623
R
Sbjct: 192 R 192
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 195/664 (29%), Positives = 345/664 (51%), Gaps = 60/664 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
R +FD+M I+ VVSW ++L GY++ DE + L++ M V N TF+T+L A
Sbjct: 158 GRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALAD 217
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ + G Q+H +++K+G+E FV + L+ C
Sbjct: 218 ESIIEGGVQVHAMIVKNGFEFTTFVCNALI-----CM----------------------- 249
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
Y++ ++ DA VF M +D V W +I GYA ++ + ++F MR +G +
Sbjct: 250 ---YLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYA-AIGFYLEGFQMFHRMRLAGVKL- 304
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ F + ++ C++ K +H ++K G+EF + I AL+ Y C + D A +++
Sbjct: 305 SRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLF 364
Query: 277 DRLENPCLNASN--SLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA---- 326
+ + N ++I G + E A +F +++ N +Y++++ G
Sbjct: 365 S-MADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423
Query: 327 --VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME----------RNPVTWNSMISGYV 374
++ Q+ K +EK+P + L+ + +E ++ V W++M++G
Sbjct: 424 SQLHAQI--IKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLA 481
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC-LGSLQQGQLLHAHLVKTPFESNV 433
Q EKA+++++ + K + TFS + +ACS +++ G+ +HA VK+ + +
Sbjct: 482 QTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNAL 541
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
V ++L+ MYS+ G+I A+ F+ ++ +W +++ GY HG +A+ +F+IM Q
Sbjct: 542 CVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQ 601
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ + TF+GVL+AC AGLV EG K F M K Y + +EHY+C+VDL R+G +
Sbjct: 602 GLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDK 661
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A + I MP +W LL+AC N+E+G+ AA+K+ L YV+LSNI+AV
Sbjct: 662 AMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAV 721
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTAN 672
G W +K +RK + +VKK+ GCSWIE+ +R+ +F D ++P +++YA LE L+
Sbjct: 722 AGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIK 781
Query: 673 LNSV 676
L +
Sbjct: 782 LKDM 785
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 162/648 (25%), Positives = 288/648 (44%), Gaps = 101/648 (15%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A LFD+ P++ + +N +L +S+ E+L L +H S + ++ T S L VC
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L + G+Q+HC LKSG+ VG+ L+ Y + E+ + +FDE+ N + W
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSW--- 173
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENM 215
T L+SGYA+ +G ++ + L M+ G N
Sbjct: 174 ----------------------------TSLLSGYAR--NGLNDEVIHLINQMQMEGVN- 202
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN +TF +V+ A A G VH +++K GFEF + ALI Y E A V
Sbjct: 203 PNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAV 262
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQV 331
+D + N +I G ++G + +F+R+ A + + + +K + ++
Sbjct: 263 FDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQREL 322
Query: 332 DDSKRL----------FEKMPHRSIISLNTMISVIPE---------MERNPVTWNSMISG 372
+ +K+L F + +++ + S + E N VTW +MI G
Sbjct: 323 NFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
+VQNN +EKA+ L+ M + + T+S + A L Q LHA ++K +E
Sbjct: 383 FVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL-AGKPSSLLSQ---LHAQIIKAYYEKV 438
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V T+L+D Y + G++ ++ F SI + ++ AW+A++ G + +A+ +F +++
Sbjct: 439 PSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVK 498
Query: 493 QDIVPNAATFVGVLSAC-VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
+ + PN TF V++AC A V G +I + G L + ++ + + G++
Sbjct: 499 EGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIE 558
Query: 552 EAE----------------------------------EFIKDMPIELDAVVWGALLSACW 577
AE + +++ + LD V + +L+AC
Sbjct: 559 SAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACT 618
Query: 578 FWMNMEVGERAAQKM---FGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
+E GE+ M + +DKK I Y + ++Y+ G + K MDI
Sbjct: 619 HAGLVEEGEKYFNIMIKDYHIDKK-IEHYSCMVDLYSRAGMFDKAMDI 665
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 153/330 (46%), Gaps = 53/330 (16%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G +V + +F +P + +V+W+ ML G ++ ++++ + + + VK NE TFS+
Sbjct: 451 KTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSS 510
Query: 90 ILSVCAQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+++ C+ + ++ GKQIH +KSG V S LL Y+ IE A++VF E
Sbjct: 511 VINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEER 570
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ M+ GY Q G AK KAL++F+ M
Sbjct: 571 DIVSWNSMITGYGQ--------------------------HGDAK------KALEVFQIM 598
Query: 209 RESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG--GALIEFYCG 265
+ G +P ++ TF V+ AC G EG+ ++IK + D+ I +++ Y
Sbjct: 599 QNQG--LPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK-DYHIDKKIEHYSCMVDLYSR 655
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLIS---------MGRIEDAELIFNRLTEANSI 316
FD AM + + + P AS ++ L++ +G++ +L+ L +++
Sbjct: 656 AGMFDKAMDIINGMPFP---ASPTIWRTLLAACRVHRNLELGKLAAEKLV--SLQPNDAV 710
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
Y + +AV G ++ + + M R +
Sbjct: 711 GYVLLSNIHAVAGNWEEKAHVRKLMDERKV 740
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 46/88 (52%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
+T + G + +A +F + R +VSWN+M+ GY + ++L + M + L++
Sbjct: 548 LTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDD 607
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLK 112
TF +L+ C + +G++ +++K
Sbjct: 608 VTFIGVLTACTHAGLVEEGEKYFNIMIK 635
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 204/608 (33%), Positives = 312/608 (51%), Gaps = 98/608 (16%)
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANC-----FEIEEAKRVFDELHEDNELLWSLMLV 158
KQ H L+L++G+ ++ L+ YAN E + RVFD + + N LW+ M+
Sbjct: 51 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110
Query: 159 GYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
++ N P K ++++ +++ + FR PN+
Sbjct: 111 VCIENN-----------EPFKAILLYYEMMVAH-------------FR---------PNK 137
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
YT+ +V++AC+ G EG VH L+K G D I A+R+Y
Sbjct: 138 YTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHI-------------LSSAIRMY-- 182
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFN-RLTEANSISYNSMIKGYAVYGQVDDSKRL 337
S GR+ +A I + + E +++ +N+MI GY +G+V+ ++ L
Sbjct: 183 ----------------ASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAREL 226
Query: 338 FEKMPHRSIISL-NTMIS-------------VIPEM-ERNPVTWNSMISGYVQNNLHEKA 382
FE MP RS+IS N MIS EM ER+ ++W++MI GY+Q +A
Sbjct: 227 FEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEA 286
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L+++ M+K I + + AC+ LG+L QG+ +H + + + + +GTSLVDM
Sbjct: 287 LEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDM 346
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
Y++CG I+ A F +S+ V++W A++ G + HG +A+ LF M DI PN TF
Sbjct: 347 YAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITF 403
Query: 503 VGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
VGVL+AC GLV +G+ IF SM K YGV P +EHY C+VDLLGR+G L EAE+ + +P
Sbjct: 404 VGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP 463
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
E VWGALL AC N+E+GER + + L+ + Y +LSNIYA G+W + +
Sbjct: 464 TEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGE 523
Query: 622 IRKRLTHLEVKKDPGCSWIELN-SRVHAFSVEDRNNPNCNVIYATLEHLTANLN------ 674
+RK + +K PG S I+L VH F + D ++P IY L+ + L
Sbjct: 524 VRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEP 583
Query: 675 --SVVLFD 680
S VLFD
Sbjct: 584 DPSQVLFD 591
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 187/408 (45%), Gaps = 67/408 (16%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VSTN+ ++ ++ +FD + V WN M+ + + +++ L M +
Sbjct: 79 VSTNRYLS-------FESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVA 131
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ + N+ T+ +L C+ + +G Q+H ++K G + S + YA+ + EA
Sbjct: 132 HFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEA 191
Query: 139 KRVFD----------------------ELHEDNELL-----------WSLMLVGYVQCNL 165
+R+ D E+ EL W+ M+ G+ +C +
Sbjct: 192 RRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGM 251
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSV 224
+ A + F +M ++D + W+ +I GY + +GC +AL++F M++ + P ++ SV
Sbjct: 252 VEVAREFFDEMKERDEISWSAMIDGYIQ--EGCFMEALEIFHQMQKE-KIRPRKFVLPSV 308
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+ ACA LGA +G+ +H + + D +G +L++ Y C D A V++++ N +
Sbjct: 309 LSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEV 368
Query: 285 NASNSLINGLISMGRIEDAELIFNRL-TEANSIS--------------------YNSMIK 323
++ N++I GL GR EDA +F+++ N I+ +NSM K
Sbjct: 369 SSWNAMIGGLAMHGRAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRK 428
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIIS-LNTMISVIPEMERNPVTWNSMI 370
Y V Q++ + + + +++ ++S IP E P W +++
Sbjct: 429 EYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP-TEPTPAVWGALL 475
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 2/230 (0%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M ++I + N I+ R G + AR FD+M R +SW+ M+ GY + F E+L +
Sbjct: 230 MPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEI 289
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M + ++ + ++LS CA L +L G+ IH ++ + +G+ L+ YA
Sbjct: 290 FHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAK 349
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISG 190
C I+ A VF+++ W+ M+ G DA D+F KM + + + +++
Sbjct: 350 CGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDINPNEITFVGVLNA 409
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
A +K L +F MR+ P + ++ R G E + V
Sbjct: 410 CAHG-GLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKV 458
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 9/190 (4%)
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS-----RCGSINDAQASFSSISSPN 463
C SL + HA +++T + Y+ SLV Y+ R S + F + PN
Sbjct: 42 QCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPN 101
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V W ++ + +A+LL+ M+ PN T+ VL AC AG+V EG+++
Sbjct: 102 VFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHA 161
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
+ +G+ + + + G L EA + D E+DAV W A++ + +E
Sbjct: 162 HLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVE 221
Query: 584 VGERAAQKMF 593
AA+++F
Sbjct: 222 ----AARELF 227
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 202/669 (30%), Positives = 342/669 (51%), Gaps = 59/669 (8%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
Q+V AR LFD++P +V+ WN ++ Y+ FD ++ L +M V+ N+ T+ +L
Sbjct: 58 QVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLK 117
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
C+ L ++ DG +IH G E FV + L+ FYA C + EA+R+
Sbjct: 118 ACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRL----------- 166
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRES 211
F M +DVV W +I+G S+ G C+ A++L M+E
Sbjct: 167 --------------------FSSMSHRDVVAWNAMIAGC--SLYGLCDDAVQLIMQMQEE 204
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PN T V+ A GK +HG ++ F+ +G L++ Y C+
Sbjct: 205 GI-CPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLY 263
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-----EANSISYNSMIKGYA 326
A +++D + + +++I G + +++A +F+++ + ++ S+++ A
Sbjct: 264 ARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACA 323
Query: 327 VYGQVDDSKRL----------FEKMPHRSIISLNTMISVIPEMER-----NP---VTWNS 368
+ ++L + + +++S+ VI + R NP V++++
Sbjct: 324 KLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSA 383
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
++SG VQN AL ++ M+ ID +T + ACS L +LQ G H +L+
Sbjct: 384 IVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRG 443
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
F ++ + +L+DMYS+CG I+ A+ F+ + ++ +W A++ GY HGLG EA+ LF
Sbjct: 444 FATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFH 503
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
+L + P+ TF+ +LS+C +GLV EG F +M + + +VP +EH C+VD+LGR+
Sbjct: 504 DLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRA 563
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G + EA FI++MP E D +W ALLSAC N+E+GE ++K+ L + +V+LS
Sbjct: 564 GLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLS 623
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NIY+ G+W IR +KK PGCSWIE+N VHAF D+++ + I LE
Sbjct: 624 NIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLE 683
Query: 668 HLTANLNSV 676
L + +
Sbjct: 684 ELLVEMKRL 692
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 136/529 (25%), Positives = 238/529 (44%), Gaps = 78/529 (14%)
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R VK N + +L C Q SL + K+IH LK+ V L Y +C ++
Sbjct: 4 RXEVKNN---YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVV 60
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA--KS 194
A+R+FDE+ P V++W ++I YA
Sbjct: 61 LARRLFDEI-------------------------------PNPSVILWNQIIRAYAWNGP 89
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
DG A+ L+ M G PN+YT+ V++AC+ L A +G +H G E D
Sbjct: 90 FDG---AIDLYHSMLHLGVR-PNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVF 145
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFN----- 308
+ AL++FY C A R++ + + + A N++I G G +DA +LI
Sbjct: 146 VCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEG 205
Query: 309 -------------RLTEANSISYNSMIKGYAVYGQVDD-----SKRLFEKMPHRSIISLN 350
+ EA ++ + + GY V D+ + L + ++
Sbjct: 206 ICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYAR 265
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACS 409
+ V+ RN V+W++MI GYV ++ ++AL+L+ M K A+D T T + AC+
Sbjct: 266 KIFDVMGV--RNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACA 323
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
L L +G+ LH +++K ++ +G +L+ MY++CG I+DA F ++ + +++A
Sbjct: 324 KLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSA 383
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC-----VRAGLVNEGMKIFRS 524
+++G +G + A+ +F +M I P+ T +GVL AC ++ G + G I R
Sbjct: 384 IVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRG 443
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ ++ ++D+ + G + A E M D V W A++
Sbjct: 444 FATDTLI-----CNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMI 486
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 206/488 (42%), Gaps = 92/488 (18%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G LV A+ LF M R VV+WN M+ G S + D+++ L+ M + N +T +L
Sbjct: 158 GILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ +L GK +H ++ ++ VG+GLL YA C + A+++FD + NE+
Sbjct: 218 PTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV 277
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS M+ GYV + M +A ++F +M KD +
Sbjct: 278 SWSAMIGGYVXSDCMKEALELFDQMILKDAMD---------------------------- 309
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P T SV+RACA+L G+ +H +IK G D +G L+ Y C D
Sbjct: 310 ----PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDD 365
Query: 272 AMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFN---------------------- 308
A+R +D + NP + S +++++G + G A IF
Sbjct: 366 AIRFFDXM-NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACS 424
Query: 309 -----------------RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
R +++ N++I Y+ G++ ++ +F +M I+S
Sbjct: 425 HLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVS--- 481
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
WN+MI GY + L +AL L+ + L + TF L +CS
Sbjct: 482 --------------WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHS 527
Query: 412 GSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTA 469
G + +G+L + + + +VD+ R G I++A ++ P+V W+A
Sbjct: 528 GLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSA 587
Query: 470 LMNGYSHH 477
L++ H
Sbjct: 588 LLSACRIH 595
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 1/183 (0%)
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
++ + L AC SL + + +H H +K ++ V L +Y C + A+ F
Sbjct: 7 VKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLF 66
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
I +P+V W ++ Y+ +G A+ L+ ML + PN T+ VL AC +
Sbjct: 67 DEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIE 126
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+G++I K +G+ + T +VD + G L EA+ M D V W A+++ C
Sbjct: 127 DGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIAGC 185
Query: 577 WFW 579
+
Sbjct: 186 SLY 188
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 73/156 (46%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I+ N ++ + G + A FD M + VS++ ++ G + +LS+ M
Sbjct: 347 ILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQL 406
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S + + TT +L C+ L +L G H ++ G+ + + L+ Y+ C +I
Sbjct: 407 SGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISF 466
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
A+ VF+ + + + W+ M++GY L +A +F
Sbjct: 467 AREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 502
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+TLI N I + G++ AR +F++M +VSWN M+ GY E+L L
Sbjct: 447 DTLI--CNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHD 504
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
+ +K ++ TF +LS C+ +++G+
Sbjct: 505 LLALGLKPDDITFICLLSSCSHSGLVMEGR 534
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 195/662 (29%), Positives = 342/662 (51%), Gaps = 61/662 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A+N+FD + +V WN ML G+ + +E++ + M R ++ +E TF +IL C
Sbjct: 379 AKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTY 438
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L+S GKQ+HC+ +K+ + FV + L Y+ I +AK +F +
Sbjct: 439 LSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI----------- 487
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
P KD + W L G A++++ E+A+ + + MR G P
Sbjct: 488 --------------------PYKDSISWNALTVGLAQNLEE-EEAVCMLKRMRLHGIT-P 525
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
++ +F + I AC+ + A GK +H L IK G + ++G +LI+ Y + + +++
Sbjct: 526 DDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 585
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKG------YA 326
+++ + N+LI G + ++A +F ++ + +S++++S++ G A
Sbjct: 586 AQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSA 645
Query: 327 VYGQVD----DSKRLFEK-----------MPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
+ QV S L++ + + + N +++ +P+ +N W ++IS
Sbjct: 646 IGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD-HKNLFEWTAIIS 704
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
GY QN + +L + MR + +TF+ + ACS + + G+ +H + K+ F S
Sbjct: 705 GYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGS 764
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIM 490
++L+DMYS+CG + + +F + + ++ W +++ G++ +G EA+LLF+ M
Sbjct: 765 YETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKM 824
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGH 549
E I P+ TF+GVL AC +GL++EG F SM K YG+ P L+HY C +DLLGR GH
Sbjct: 825 EELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGH 884
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
L EA+E I +P D VVW L+AC + E G+ AA+K+ L+ + S YV+LS++
Sbjct: 885 LQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSL 944
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+A G W + R+ + V K PGCSWI + ++ F V+D+ +P+ IY L L
Sbjct: 945 HAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDL 1004
Query: 670 TA 671
T
Sbjct: 1005 TG 1006
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 140/575 (24%), Positives = 250/575 (43%), Gaps = 104/575 (18%)
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ ++ + +LS C+++ L G+Q+HC V+KSG+ F + L+ YA C ++ A+R
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI-------------------------- 174
VFD + + + WS M+ Y + +A +F
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 274
Query: 175 ---------KMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSV 224
KMP V W +ISG+A+S G E L L++ MR G P TF S+
Sbjct: 275 LDHATALLKKMPTPSTVAWNAVISGHAQS--GLEFNVLGLYKDMRSWGL-WPTRSTFASM 331
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+ A A + AF EG+ +H + G + + +G +LI Y C A V+D +
Sbjct: 332 LSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNI 391
Query: 285 NASNSLINGLISMGRIEDAELIFNRLT----EANSISY---------------------- 318
N+++ G + E+A +F + + + ++
Sbjct: 392 VMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCV 451
Query: 319 -------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
N+ + Y+ YG + D+K LF +P++ IS
Sbjct: 452 TIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSIS----------------- 494
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WN++ G QN E+A+ + MR I +FS +ACS + + + G+ +H +
Sbjct: 495 WNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAI 554
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K SN VG+SL+D+YS+ G + ++ F+ + + ++ AL+ G+ + EA+
Sbjct: 555 KYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQ 614
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNE--GMKIFRSMKSYGVVPTLEHYTCVVDL 543
LF+ +L+ + P++ TF +LS C +G +N G ++ GV+ + V L
Sbjct: 615 LFQQVLKDGLKPSSVTFSSILSGC--SGSLNSAIGKQVHCYTLKSGVL--YDDTLLGVSL 670
Query: 544 LG---RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G +S L +A + + +MP + W A++S
Sbjct: 671 AGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 141/592 (23%), Positives = 261/592 (44%), Gaps = 95/592 (16%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
I+ +G+L A L +MP + V+WN ++ G+++ L L M +
Sbjct: 266 ISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTR 325
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
+TF+++LS A + + ++G+Q+H + G + FVGS L+ YA C +AK VFD
Sbjct: 326 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 385
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
E N ++W+ ML G+VQ L E+A+++
Sbjct: 386 SCEKNIVMWNAMLTGFVQNELP--------------------------------EEAIRM 413
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F++M +E+TF S++ AC L +F GK VH + IK + + A ++ Y
Sbjct: 414 FQYMMRYTLQT-DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYS 472
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-------------- 310
A A ++ + + N+L GL E+A + R+
Sbjct: 473 KYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFST 532
Query: 311 ----------TEAN------SISY---------NSMIKGYAVYGQVDDSKRLFEKMPHRS 345
TE +I Y +S+I Y+ +G V+ S+++F ++ S
Sbjct: 533 AINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASS 592
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
I+ + N++I+G+VQNN ++A+QL+ + K + + TFS +
Sbjct: 593 IVPI-----------------NALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSIL 635
Query: 406 HACSCLGSLQQ--GQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISS- 461
CS GSL G+ +H + +K+ + +G SL +Y + + DA + +
Sbjct: 636 SGCS--GSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 693
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
N+ WTA+++GY+ +G G +++ F M ++ + ATF VL AC +G +I
Sbjct: 694 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 753
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G + ++D+ + G + + E K++ + D + W +++
Sbjct: 754 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 193/392 (49%), Gaps = 23/392 (5%)
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
+ L+S +A+S + L FR++R + P+++ V+ AC+R+G G+ VH +
Sbjct: 126 SSLLSCHARSGSPGD-VLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDV 184
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
+K GF AL++ Y C A RV+D + P +S+I +G ++A
Sbjct: 185 VKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEAL 244
Query: 305 LIFNRLTEANS----ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
+F+R+ + S ++ ++I A G++D + L +KMP S
Sbjct: 245 ALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPST-------------- 290
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
V WN++ISG+ Q+ L L LY MR + TRSTF+ + A + + + +GQ +
Sbjct: 291 ---VAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQM 347
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA V ++NV+VG+SL+++Y++CG +DA+ F N+ W A++ G+ + L
Sbjct: 348 HAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELP 407
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
EA+ +F+ M+ + + TFV +L AC G ++ + +L
Sbjct: 408 EEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT 467
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+D+ + G + +A+ +P + D++ W AL
Sbjct: 468 LDMYSKYGAIGDAKALFSLIPYK-DSISWNAL 498
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/478 (21%), Positives = 205/478 (42%), Gaps = 66/478 (13%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G + A+ LF +P + +SWN + G ++ + +E++ ++ M + ++ +FST
Sbjct: 473 KYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFST 532
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
++ C+ + + GKQIHCL +K G VGS L+ Y+ ++E ++++F ++ +
Sbjct: 533 AINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASS 592
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ + ++ G+VQ N +A +F ++ K DG +
Sbjct: 593 IVPINALIAGFVQNNNEDEAIQLFQQVLK-----------------DGLK---------- 625
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES-IGGALIEFYCGCEA 268
P+ TF S++ C+ GK VH +K G +D++ +G +L Y +
Sbjct: 626 ------PSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKM 679
Query: 269 FDGAMRVYDRL-ENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIK 323
+ A ++ + ++ L ++I+G G + + + F R+ N ++ S++K
Sbjct: 680 LEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLK 739
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-------------------ERNPV 364
+ D K + + S T S + +M +++ +
Sbjct: 740 ACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIM 799
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
WNSMI G+ +N ++AL L+ M +L I TF + AC+ G + +G+ +
Sbjct: 800 PWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSM 859
Query: 425 VK----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
K TP + +D+ R G + +AQ + + P+ W + H
Sbjct: 860 RKVYGLTPRLDHY---ACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMH 914
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 22/161 (13%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+T+ I + G ++++ F ++ + ++ WN+M+ G++K DE+L L M
Sbjct: 767 TATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEE 826
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK--------SGYECF-EFVGSGLLFF 128
+K +E TF +L C + +G+ + K Y CF + +G G
Sbjct: 827 LQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRG---- 882
Query: 129 YANCFEIEEAKRVFDEL-HEDNELLWSLMLVGYVQCNLMSD 168
++EA+ D+L + ++W+ L C + D
Sbjct: 883 ----GHLQEAQEAIDQLPFRPDGVVWATYLAA---CRMHKD 916
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 210/655 (32%), Positives = 321/655 (49%), Gaps = 61/655 (9%)
Query: 41 FDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSL 100
FDQ + +WN L + + ++ T+ RS + + T ILS + L
Sbjct: 853 FDQGS--NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDL 910
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
G+QIH LV+KS + V + L+ Y+ + A++ F
Sbjct: 911 DLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF------------------ 952
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
I P+ D++ W +IS YA++ E A+ FR + G P+++T
Sbjct: 953 -------------INSPELDLISWNTMISSYAQNNLEME-AICTFRDLLRDGLK-PDQFT 997
Query: 221 FDSVIRACARLGA---FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
SV+RAC+ F G VH IKCG D + ALI+ Y D A +
Sbjct: 998 LASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLH 1057
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDD 333
+ L + N+++ G I + A F+ + E + I+ + IK +
Sbjct: 1058 GKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQ 1117
Query: 334 SKRLFE---KMPHRSII--------------SLNTMISVIPEMER-NPVTWNSMISGYVQ 375
K++ K+ + + + + + E+ R + V W +MISGY++
Sbjct: 1118 GKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIE 1177
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N + AL +Y MR + TF+ L A SCL +L+QG+ +HA++VK + + +V
Sbjct: 1178 NGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFV 1237
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
GTSLVDMY +CGS+ DA F + V W A++ G + HG EA+ LF M I
Sbjct: 1238 GTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGI 1297
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
P+ TF+GVLSAC +GL +E K F +M K+YG+ P +EHY+C+VD LGR+G + EAE
Sbjct: 1298 QPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAE 1357
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
I MP + A ++ ALL AC + E +R A K+ LD SAYV+LSNIYA
Sbjct: 1358 NVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASR 1417
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+W D R + VKKDPG SWI++ ++VH F V+DR++P ++IY +E L
Sbjct: 1418 QWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDL 1472
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 192/457 (42%), Gaps = 76/457 (16%)
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK----ALKLFRWMRES 211
++ Y +C + A VF K +D+V W +++ YA+ D + +LF +RE
Sbjct: 652 LITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREF 711
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G ++ T +++ C G + VHG +K GFE D + GAL+ YC
Sbjct: 712 GFSI-TRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYC------- 763
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
G + A L+F+++ E +++ +N M+K Y
Sbjct: 764 ------------------------KYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQ 799
Query: 332 DDSKRLFEKMPHRS------------IISLNTMIS----------------VIP-EMERN 362
D++ R F HRS I +N+ +S + P + N
Sbjct: 800 DEALRFFSAF-HRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSN 858
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
WN ++ ++ A+ + T+ + I T ++ A L G+ +HA
Sbjct: 859 IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHA 918
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP--NVAAWTALMNGYSHHGLG 480
++K+ F V V SL++MYS+ G + A+ +F I+SP ++ +W +++ Y+ + L
Sbjct: 919 LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF--INSPELDLISWNTMISSYAQNNLE 976
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY----GVVPTLEH 536
EA+ F +L + P+ T VL AC G E + + Y G++
Sbjct: 977 MEAICTFRDLLRDGLKPDQFTLASVLRAC-STGDEGEYFTLGSQVHVYAIKCGIINDSFV 1035
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
T ++DL + G + EA EF+ + D W A++
Sbjct: 1036 STALIDLYSKGGKMDEA-EFLLHGKYDFDLASWNAIM 1071
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 135/311 (43%), Gaps = 64/311 (20%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A LF ++ V+W TM+ GY + D +LS+ M S V+ +E TF+T++
Sbjct: 1148 GDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLI 1207
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ L +L GKQIH V+K Y FVG+ L+ Y C +++A RVF ++ +
Sbjct: 1208 KASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVV 1267
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ML+G Q G+ ++AL LFR M+ +
Sbjct: 1268 FWNAMLLGLAQ--------------------------HGH------VDEALNLFRTMQSN 1295
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P++ TF V+ AC+ G F E + FD
Sbjct: 1296 GIQ-PDKVTFIGVLSACSHSGLFSE----------------------------AYKYFDA 1326
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-EANSISYNSMIKGYAVYGQ 330
+ Y P + + L++ L GRI++AE + + +A++ Y +++ G
Sbjct: 1327 MFKTYGI--TPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGD 1384
Query: 331 VDDSKRLFEKM 341
+ +KR+ +K+
Sbjct: 1385 AETAKRVADKL 1395
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 123/582 (21%), Positives = 228/582 (39%), Gaps = 83/582 (14%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-----ESLSLVSTM 75
TN IT + G L +AR +FD+ R +V+WN++L Y+++A E L +
Sbjct: 649 TNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLL 708
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ T + +L +C + + +H +K G+E FV L+ Y +
Sbjct: 709 REFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLV 768
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGY 191
+A+ +FD++ E + +LW++ML YV+ + +A F + D +I G
Sbjct: 769 GQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGV 828
Query: 192 AKSVDGCEK---------ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
V K A+K+F + + G N+ + ++ + G
Sbjct: 829 NSDVSNNRKRHAEQVKAYAMKMFPF--DQGSNI---FAWNKKLTEFLHAGQIVAAIDCFK 883
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN----PCLNASNSLINGLISMG 298
L++ D ++ G + D +++ + P + SNSL+N G
Sbjct: 884 TLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAG 943
Query: 299 RIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE 358
+ AE F E + IS+N+MI YA
Sbjct: 944 VVYAAEKTFINSPELDLISWNTMISSYA-------------------------------- 971
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS---LQ 415
QNNL +A+ + + + + + T + + ACS
Sbjct: 972 ----------------QNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G +H + +K ++ +V T+L+D+YS+ G +++A+ ++A+W A+M GY
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYI 1075
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN--EGMKIFRSMKSYGVVPT 533
+A+ F +M E I + T + A L+N +G +I G
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS--GCLINLKQGKQIQAYAIKLGFNND 1133
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
L + V+D+ + G + A E ++ D V W ++S
Sbjct: 1134 LWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISG 1174
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 6/171 (3%)
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+ L+ G+ HA +V + + Y+ +L+ MYS+CGS+ A+ F S ++ W +
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 470 LMNGYSHHGLGS-----EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
++ Y+ S E LF ++ E T +L C+ +G V +
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G L +V++ + G + +A MP E DAV+W +L A
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|310656753|gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
Length = 788
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 202/665 (30%), Positives = 320/665 (48%), Gaps = 82/665 (12%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
++E + G + +AR LFD MP RTVVS+ TM+ K + E++ L +V
Sbjct: 156 VSEHVKAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFT 215
Query: 85 TTFSTILSVCAQLNSL-IDGKQIHCLVLKSG----------------------------- 114
T S + N+L + K + C V +G
Sbjct: 216 ATISGFVRNELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGEFGLALSIVGLAIKS 275
Query: 115 --YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
+E V + L+ Y + A++VFDE+ + + W+ +L Y + + A V
Sbjct: 276 NFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRV 335
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
MP+++ V W LI+ + + + E A+KL+ M G PN F SV+ ACA L
Sbjct: 336 LDAMPERNEVSWGTLIARHEQRGNAAE-AVKLYSQMLADGCR-PNISCFSSVLSACASLE 393
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
G +H +K G + + +LI+ YC C N C
Sbjct: 394 DLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKC--------------NKC--------- 430
Query: 293 GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
DA+ IF+ L + N + +NS++ GY+ G++ ++ LF+KMP
Sbjct: 431 --------GDAQTIFDTLPQKNIVCWNSLVSGYSYNGKMVEAMYLFKKMP---------- 472
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
RN +WN++ISGY QN AL+ + M TFS + AC+ L
Sbjct: 473 -------ARNLASWNTIISGYAQNRQFVDALKSFNAMLASGQVPGEITFSSVLLACANLC 525
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
SL G++ HA +K E ++++GT+L DMY++ G + ++ F + N WTA++
Sbjct: 526 SLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQ 585
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
G + +G E++LLFE M+ + PN TF+ +L AC GLV + + F M++ G+ P
Sbjct: 586 GLAENGFAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFDKMQALGISP 645
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+HYTC+VD+L R+G L EAE + P + +A W ALLSAC + N E+ ERAA+++
Sbjct: 646 KEKHYTCMVDVLARAGRLAEAEALLMKTPSKSEANSWAALLSACNTYRNEEIAERAAKRL 705
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
L K + YV+LSN+YA G+W IR + +KKD GCSW+++ + HAF
Sbjct: 706 HELAKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGGCSWVQVRGQYHAFFSW 765
Query: 653 DRNNP 657
+ +P
Sbjct: 766 EAKHP 770
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/534 (24%), Positives = 223/534 (41%), Gaps = 117/534 (21%)
Query: 106 IHCLVLKSGYECFEFVGSGLLFFYA-------------NCF------------------- 133
+H ++SG V S LL YA +C
Sbjct: 102 LHAHAVRSGVAADRSVASHLLTTYAAFARAAERDRAFGDCVAADAASPFAYDFMVSEHVK 161
Query: 134 --EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+I A+R+FD + + + ++ M+ ++ +++A +++ + P V +T ISG+
Sbjct: 162 AGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGF 221
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
++ + AL +FR M S PN T +I+AC G F + GL IK F F
Sbjct: 222 VRN-ELHHNALGVFRKML-SCRVRPNGITIVCMIKACVGAGEFGLALSIVGLAIKSNF-F 278
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
+ SI NSLI + MG A +F+ +
Sbjct: 279 ESSI-----------------------------EVQNSLITLYLRMGDAAAARKVFDEMD 309
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
+ +S+ +++ Y+ G +D ++R+ + MP ERN V+W ++I+
Sbjct: 310 VKDVVSWTALLDVYSESGDLDGARRVLDAMP-----------------ERNEVSWGTLIA 352
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
+ Q +A++LY M S FS + AC+ L L+ G +HA +K +
Sbjct: 353 RHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACASLEDLRGGARIHARSLKMGSST 412
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
NV+V SL+DMY +C DAQ F ++ N+ W +L++GYS++G EA+ LF+ M
Sbjct: 413 NVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNIVCWNSLVSGYSYNGKMVEAMYLFKKMP 472
Query: 492 EQDI-------------------------------VPNAATFVGVLSACVR-AGLVNEGM 519
+++ VP TF VL AC LV M
Sbjct: 473 ARNLASWNTIISGYAQNRQFVDALKSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKM 532
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+++K G+ ++ T + D+ +SG L ++ MP E + V W A++
Sbjct: 533 AHAKTIK-LGIEESIFIGTALSDMYAKSGDLQSSKRMFYQMP-ERNDVTWTAMI 584
>gi|242038427|ref|XP_002466608.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
gi|241920462|gb|EER93606.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
Length = 752
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 194/623 (31%), Positives = 313/623 (50%), Gaps = 55/623 (8%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS + + G + A L+++ P+ +V + M+ G+ + ++ +
Sbjct: 182 EKSVVSYTTMVDALMKRGSVKDAVKLYERCPLYSVAFFTAMIAGFVRNELHKDAFPVFRK 241
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF---VGSGLLFFYAN 131
M R +V+ N T ++ C + L +K + FE V + L+ Y
Sbjct: 242 MLRCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAIK--WNLFEKSIEVHNSLITLYLR 299
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+ A RVFD++ + + W+ +L Y + + A V MP+++ V W+ LI+ +
Sbjct: 300 MGDAAAAHRVFDDMEVRDVVSWTALLDVYAELGDLEGARRVLDAMPERNEVSWSTLIARH 359
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
+ D E ALKL+ M G PN F SV+ ACA L G +H +K GF
Sbjct: 360 EQKGDSAE-ALKLYSQMLAEGCR-PNISCFSSVLSACATLHDLRGGTRIHANALKMGFSS 417
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
+ +LI+ YC C+ + DA+ IFN L
Sbjct: 418 SLFVSSSLIDMYCKCK-------------------------------QCTDAQRIFNSLP 446
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
E N++ +NS+I GY+ G++ +++ LF+KMP RN +WN+MIS
Sbjct: 447 EKNTVCWNSLISGYSWNGKMVEAEELFKKMP-----------------ARNAASWNTMIS 489
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
GY +N AL + M T S + AC+ L SL+ G+++HA +VK E
Sbjct: 490 GYAENRRFGDALNYFCAMLASGQIPGEITLSSVLLACANLCSLEMGKMVHAEIVKLGIED 549
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
N+++GT+L DMY++ G ++ ++ F + N WTA++ G + +G E++LLFE M+
Sbjct: 550 NIFMGTALSDMYAKSGDLDSSRRMFYQMPEKNNITWTAMVQGLAENGFAEESILLFENMI 609
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
I PN TF+ +L AC GLV + + F +M+++G+ P +HYTC+VD+L R+G L
Sbjct: 610 ANRIAPNEHTFLAILFACSHCGLVEQAIHYFETMQAHGIPPKDKHYTCMVDVLARAGRLP 669
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
EAEE + +P +LD W +LLSAC + N E+GERAA+K+ L+K + YV+LSN+YA
Sbjct: 670 EAEELLMKVPSKLDTSSWSSLLSACNTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYA 729
Query: 612 VLGKWGKKMDIRKRLTHLEVKKD 634
GKW + R + +KKD
Sbjct: 730 SCGKWKDAAETRILMQGPRLKKD 752
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 202/471 (42%), Gaps = 81/471 (17%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+I A+R+FD + E + + ++ M+ ++ + DA ++ + P V +T +I+G+ +
Sbjct: 169 DIASARRLFDGMPEKSVVSYTTMVDALMKRGSVKDAVKLYERCPLYSVAFFTAMIAGFVR 228
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ + + A +FR M PN T VI+AC G F V GL IK F++
Sbjct: 229 N-ELHKDAFPVFRKMLRCSVR-PNVVTLICVIKACVGAGEFDLAMGVVGLAIKWNL-FEK 285
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
SI NSLI + MG A +F+ +
Sbjct: 286 SI-----------------------------EVHNSLITLYLRMGDAAAAHRVFDDMEVR 316
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
+ +S+ +++ YA G ++ ++R+ + MP ERN V+W+++I+ +
Sbjct: 317 DVVSWTALLDVYAELGDLEGARRVLDAMP-----------------ERNEVSWSTLIARH 359
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
Q +AL+LY M S FS + AC+ L L+ G +HA+ +K F S++
Sbjct: 360 EQKGDSAEALKLYSQMLAEGCRPNISCFSSVLSACATLHDLRGGTRIHANALKMGFSSSL 419
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE----- 488
+V +SL+DMY +C DAQ F+S+ N W +L++GYS +G EA LF+
Sbjct: 420 FVSSSLIDMYCKCKQCTDAQRIFNSLPEKNTVCWNSLISGYSWNGKMVEAEELFKKMPAR 479
Query: 489 --------------------------IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
ML +P T VL AC + G +
Sbjct: 480 NAASWNTMISGYAENRRFGDALNYFCAMLASGQIPGEITLSSVLLACANLCSLEMGKMVH 539
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G+ + T + D+ +SG L + MP E + + W A++
Sbjct: 540 AEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRMFYQMP-EKNNITWTAMV 589
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 140/326 (42%), Gaps = 47/326 (14%)
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM----------ERN 362
A+S +Y+ M+ + G + ++RLF+ MP +S++S TM+ + + ER
Sbjct: 152 ASSFTYDFMVSEHVKAGDIASARRLFDGMPEKSVVSYTTMVDALMKRGSVKDAVKLYERC 211
Query: 363 PVT----WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS----- 413
P+ + +MI+G+V+N LH+ A ++ M + ++ T + AC G
Sbjct: 212 PLYSVAFFTAMIAGFVRNELHKDAFPVFRKMLRCSVRPNVVTLICVIKACVGAGEFDLAM 271
Query: 414 --------------------------LQQGQLLHAHLVKTPFE-SNVYVGTSLVDMYSRC 446
L+ G AH V E +V T+L+D+Y+
Sbjct: 272 GVVGLAIKWNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYAEL 331
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G + A+ ++ N +W+ L+ + G +EA+ L+ ML + PN + F VL
Sbjct: 332 GDLEGARRVLDAMPERNEVSWSTLIARHEQKGDSAEALKLYSQMLAEGCRPNISCFSSVL 391
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
SAC + G +I + G +L + ++D+ + +A+ +P E +
Sbjct: 392 SACATLHDLRGGTRIHANALKMGFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLP-EKNT 450
Query: 567 VVWGALLSACWFWMNMEVGERAAQKM 592
V W +L+S + M E +KM
Sbjct: 451 VCWNSLISGYSWNGKMVEAEELFKKM 476
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 207/676 (30%), Positives = 333/676 (49%), Gaps = 117/676 (17%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A LFD+MP R +S+ T++ GY++ +F E++ L +HR +LN F+TIL +
Sbjct: 89 LCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKL 148
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
++ G IH + K G+E FVG+ L+
Sbjct: 149 LVSMDCGELGWGIHACIFKLGHESNAFVGTALI--------------------------- 181
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
Y C + A +VF + KD+V WT +++ +A++ D ++ALKLF MR G
Sbjct: 182 ----DAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAEN-DCFKEALKLFSQMRMVGF 236
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
PN +TF SV +AC L AF GK VHG +K +E D +G AL++ Y D A
Sbjct: 237 K-PNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDAR 295
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKG----- 324
++ + + + +I + ++A +F ++ +A N ++ S+++
Sbjct: 296 XAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATME 355
Query: 325 ------------------------------YAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
YA G++++S LF + PHR+
Sbjct: 356 GLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRN--------D 407
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
V P WN++I G+VQ EKAL+L++ M + + T T+S AC+ L +L
Sbjct: 408 VTP--------WNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAAL 459
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ G +H+ VKT F+ ++ V +L+DMY++CGSI DA+ F ++ + +W A+++GY
Sbjct: 460 EPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGY 519
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPT 533
S HGL AC AGL+++G F SM + +G+ P
Sbjct: 520 SMHGL----------------------------ACANAGLLDQGQAYFTSMIQDHGIEPC 551
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
+EHYTC+V LLGR GHL +A + I ++P + +VW ALL AC ++E+G +AQ +
Sbjct: 552 IEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVL 611
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
++ + + +V+LSN+YA +W +RK + VKK+PG SWIE VH+F+V D
Sbjct: 612 EMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGD 671
Query: 654 RNNPNCNVIYATLEHL 669
++P VI LE L
Sbjct: 672 TSHPEVRVINGMLEWL 687
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/540 (22%), Positives = 233/540 (43%), Gaps = 91/540 (16%)
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
H S + N ++ L C Q + GK +HC +LK G G L +A
Sbjct: 30 HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRG---------GCLDLFA----- 75
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
W+++L YV+ + + DA +F +MP+++ + + LI GYA+SV
Sbjct: 76 -----------------WNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESV 118
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
E A++LF + G + N + F ++++ + G +H + K G E + +
Sbjct: 119 RFLE-AIELFVRLHREGHEL-NPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFV 176
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT---- 311
G ALI+ Y C D A V+D + + + ++ ++A +F+++
Sbjct: 177 GTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGF 236
Query: 312 EANSISYNSMIKG-----------------------------------YAVYGQVDDSKR 336
+ N+ ++ S+ K Y G +DD++
Sbjct: 237 KPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARX 296
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
FE++P + +I W+ MI+ Y Q++ ++A++++ MR+ +
Sbjct: 297 AFEEIPKKDVIP-----------------WSFMIARYAQSDQSKEAVEMFFQMRQALVLP 339
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ TF+ + AC+ + L G +H H++K S+V+V +L+D+Y++CG + ++ F
Sbjct: 340 NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLF 399
Query: 457 SSISSPN-VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
+ N V W ++ G+ G G +A+ LF MLE + T+ L AC +
Sbjct: 400 AESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAAL 459
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G++I + ++D+ + G + +A + D+ + D V W A++S
Sbjct: 460 EPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA-RLVFDLMNKQDEVSWNAMISG 518
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 203/481 (42%), Gaps = 101/481 (20%)
Query: 24 AITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLN 83
A + CGR + AR +FD + + +VSW M+ +++ F E+L L S M K N
Sbjct: 183 AYSVCGR---VDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPN 239
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
TF+++ C L + GK +H LKS YE +VG LL Y +I++A+ F+
Sbjct: 240 NFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFE 299
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
E+ + + + WS M+ Y Q + +A ++F +M + V
Sbjct: 300 EIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALV---------------------- 337
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
+PN++TF SV++ACA + G +H +IK G D + AL++ Y
Sbjct: 338 -----------LPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVY 386
Query: 264 CGCEAFDGAMRVYDRLENPCLNAS---NSLINGLISMGRIEDAELIFNRLTE----ANSI 316
C + +M ++ E+P N N++I G + +G E A +F + E A +
Sbjct: 387 AKCGRMENSMXLF--AESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEV 444
Query: 317 SYNSMIKGYAVYGQVDDS--------KRLFEKMPHRSIISLNTMISVIPEM--------- 359
+Y+S ++ A ++ K F+K I+ N +I + +
Sbjct: 445 TYSSALRACASLAALEPGLQIHSLTVKTTFDK----DIVVTNALIDMYAKCGSIKDARLV 500
Query: 360 -----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+++ V+WN+MISGY + L AC+ G L
Sbjct: 501 FDLMNKQDEVSWNAMISGYSMHGL----------------------------ACANAGLL 532
Query: 415 QQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMN 472
QGQ +++ E + T +V + R G ++ A I P+V W AL+
Sbjct: 533 DQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLG 592
Query: 473 G 473
Sbjct: 593 A 593
>gi|297605437|ref|NP_001057211.2| Os06g0228900 [Oryza sativa Japonica Group]
gi|255676854|dbj|BAF19125.2| Os06g0228900 [Oryza sativa Japonica Group]
Length = 695
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/660 (29%), Positives = 341/660 (51%), Gaps = 40/660 (6%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNV 80
N+++ R G+ AR LFD +P R+VV+WN++L G ++ + M R V
Sbjct: 4 NRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAV 63
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
N T S + L +++ + + + + LL YA ++EA+R
Sbjct: 64 SWN--TLLAAYSASPHPDHLAAARRLFDEMPQRDVVTW----NTLLGAYARRGLMDEARR 117
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+FDE+ + N W+ M+ G+ + A DVF MP KD + ++SG+ K +G
Sbjct: 118 LFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTK--NGMLH 175
Query: 201 ALKLFRWMRESGENMPNEY-TFDSVIRACARLGAFCE----------GKVVHGLLIKCGF 249
+ R S +M ++++I A + G F + G+ H +L + GF
Sbjct: 176 EAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGF 235
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
E + +++ Y A +++ + + L + N++I+G ++++E +F
Sbjct: 236 ERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWE 295
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ + +++S+N +I+G+ G+ + ++ F++MP ER ++WN+M
Sbjct: 296 MPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMP-----------------ERGTISWNTM 338
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
ISGY +N + +++L+ M ++ R TFS + AC+ + L G +H LV+ F
Sbjct: 339 ISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPMLGLGAQIH-QLVEKSF 397
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
+ + +L+ MYSRCG++NDA+A F + + ++ +W AL+ Y HHG ++A+ LF+
Sbjct: 398 VPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFK 457
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
M ++P TFV +LSACV AGLV+EG +F +M YG+V +EHY +V+L+GR
Sbjct: 458 EMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAALVNLIGRH 517
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L +A E I MP+ D VWGA L AC N + + AA+++ ++ + YV++
Sbjct: 518 GQLDDALEVINSMPMAPDRSVWGAFLGACTAKKNEPLAQMAAKELSTINPDSSAPYVLIH 577
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
N++A GKWG +R+ + + K PG SWI+L ++H F D +PN I++ LE
Sbjct: 578 NLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDLEGKMHVFISGDTWHPNAQEIFSVLE 637
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 170/403 (42%), Gaps = 79/403 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGY--------------SKWA 63
+V+ N + R G + AR LFD+MP R SWNTM+ G+ + A
Sbjct: 96 VVTWNTLLGAYARRGLMDEARRLFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMPA 155
Query: 64 KFDESLSLVSTMHRSNVKLNET------------------TFSTILSVCAQLNSLIDGKQ 105
K SLS + + N L+E ++T++ Q D K+
Sbjct: 156 KDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKR 215
Query: 106 I----------HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+ H ++ + G+E + ++ Y ++ A+ +F+E+ + + + W+
Sbjct: 216 LFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNT 275
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS--------------------- 194
M+ GY Q + M ++ +F +MP D V W +I G+ +
Sbjct: 276 MISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTISW 335
Query: 195 ---VDGCEK------ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
+ G EK ++KLF M E GE +P+ +TF SV+ ACA + G +H L+
Sbjct: 336 NTMISGYEKNGNYISSVKLFSKMLEVGE-IPDRHTFSSVLAACASIPMLGLGAQIHQLVE 394
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC-LNASNSLINGLISMGRIEDAE 304
K F D +I ALI Y C A + A ++ ++ L + N+LI GR A
Sbjct: 395 KS-FVPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATKAL 453
Query: 305 LIFNRLTEAN----SISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+F + A I++ S++ G V + + +F+ M H
Sbjct: 454 QLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVH 496
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 207/705 (29%), Positives = 348/705 (49%), Gaps = 99/705 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV + K I +G + +R+ FD + + + SWN+++ Y ++ K+ E+++ V+ +
Sbjct: 54 IVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFS 113
Query: 78 ----SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+++ + TF IL C SL+DGK++HC V K G+E FV + L+ Y+
Sbjct: 114 MCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYS--- 167
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+ ++ A VF+ MP KDV W +ISG+ +
Sbjct: 168 ----------------------------RYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ + AL + M+ G M + T S++ CA+ G ++H ++K G + D
Sbjct: 200 NGNAA-GALGVLNRMKGEGVKM-DTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDV 257
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL---------------ISMG 298
+ ALI Y A V+D++E L + NS+I + +G
Sbjct: 258 FVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLG 317
Query: 299 RIEDAEL-------IFNRLTE------------------ANSISYNSMIKGYAVYGQVDD 333
I L IF++L++ + + N+++ YA G ++
Sbjct: 318 GIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNC 377
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
+ +F+++P + IS WN++++GY QN L +A+ Y M +
Sbjct: 378 AHTVFDQLPRKDTIS-----------------WNTLVTGYTQNGLASEAIDAYNMMEECR 420
Query: 394 -IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ T+ + A S +G+LQQG +HA L+K +V+V T L+D+Y +CG + DA
Sbjct: 421 DTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDA 480
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ F I W A++ HG G EA+ LF+ ML + + + TFV +LSAC +
Sbjct: 481 MSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHS 540
Query: 513 GLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GLV+EG K F M K YG+ P+L+HY C+VDLLGR+G+L +A E +++MPI+ DA +WGA
Sbjct: 541 GLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGA 600
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
LLSAC + N E+G A+ ++ +D + + YV+LSNIYA KW + +R +
Sbjct: 601 LLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGL 660
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+K PG S + + S+ F ++ +P IY L+ L+A + S+
Sbjct: 661 RKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSL 705
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/563 (22%), Positives = 242/563 (42%), Gaps = 105/563 (18%)
Query: 54 TMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS 113
++L SK+ K S +++H+ + F+ + + C +N+ K++H L+L
Sbjct: 3 SLLKSVSKFYK-----SATTSLHK------DADFNALFNSCVNVNAT---KKLHALLLVF 48
Query: 114 GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
G + + L+ Y +I ++ FD +H+ N W+ ++ YV+ +A +
Sbjct: 49 GKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCV 108
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
+L S M G P+ YTF +++AC L
Sbjct: 109 -----------NQLFS------------------MCGGGHLRPDFYTFPPILKACVSL-- 137
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
+GK VH + K GFE D + +L+ Y D A +V+ + + + N++I+G
Sbjct: 138 -VDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISG 196
Query: 294 LISMGRIEDAELIFNRLT---------------------------------------EAN 314
G A + NR+ +++
Sbjct: 197 FCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSD 256
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
N++I Y+ +G++ D++ +F++M R ++S WNS+I+ Y
Sbjct: 257 VFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVS-----------------WNSIIAAYE 299
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP-FESNV 433
QNN AL+ + M+ I T L S L + + + +++ + +V
Sbjct: 300 QNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDV 359
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE- 492
+G +LV+MY++ G +N A F + + +W L+ GY+ +GL SEA+ + +M E
Sbjct: 360 VIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEEC 419
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+D +PN T+V ++ A G + +GMKI + + + TC++DL G+ G L +
Sbjct: 420 RDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLED 479
Query: 553 AEEFIKDMPIELDAVVWGALLSA 575
A ++P + +V W A++++
Sbjct: 480 AMSLFYEIPRD-TSVPWNAIIAS 501
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 218/706 (30%), Positives = 350/706 (49%), Gaps = 79/706 (11%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLV 72
ET V N +T + + AR++FD MP+ R +VSW M S+ E+L L
Sbjct: 81 ETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLF 140
Query: 73 STMHRSNVKLNETTFSTILSVC--AQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFY 129
+ N T C ++L L G + LV K G+ + VG L+ +
Sbjct: 141 GETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLG-LVFKLGFWGTDVSVGCALIDMF 199
Query: 130 ANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
A ++ +RVFD L E + VVVWT LI+
Sbjct: 200 AKNGDLVAMRRVFDGLFE-------------------------------RTVVVWTLLIT 228
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
YA+S ++A++LF M E+G P++YT S++ AC LG+F G+ +H L ++ G
Sbjct: 229 RYAQS-GYSDEAVELFLDMLENGFQ-PDQYTLSSMLSACTELGSFRLGQQLHSLALRLGL 286
Query: 250 EFDESIGGALIEFYCGC---EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
E D + L++ Y ++ A V++R+ + A +L++G + G ++ +I
Sbjct: 287 ESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMI 346
Query: 307 F-----NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-- 359
N N I+Y+SM+K A G D +++ ++ LN + + + M
Sbjct: 347 LFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYA 406
Query: 360 ----------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
E+N V+++ + G ++N ++ + ++ + + TF
Sbjct: 407 ESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD-----YQIERMELGISTFTFGS 461
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
L A + +G L +GQ LHA +K F S+ +G SLV MYSRCG + DA F ++ N
Sbjct: 462 LISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHN 521
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V +WT++++G + HG + A+ LF M+ + PN T++ VLSAC AGLV EG + FR
Sbjct: 522 VISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFR 581
Query: 524 SM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
M K +G++P +EHY C+VDLLGRSG + +A +FI +MP ++DA+VW LL AC NM
Sbjct: 582 MMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNM 641
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
++GE AA + L+ + + YV+LSN+YA G W + IR + + K+ G SW+ +
Sbjct: 642 DIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHV 701
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHLTANL--------NSVVLFD 680
++ +H F D ++P IY LE L + SVVL D
Sbjct: 702 DNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHD 747
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 129/518 (24%), Positives = 222/518 (42%), Gaps = 74/518 (14%)
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK--KDVVVWTKLISGYAKSVDGCE-KA 201
L E + ++ + +L Y +C+ ++ A VF MP +D+V WT + S ++ +G E +A
Sbjct: 79 LLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSR--NGAEAEA 136
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAF-CEGKVVHGLLIKCGF-EFDESIGGAL 259
L+LF E G +PN +T + +AC F G V GL+ K GF D S+G AL
Sbjct: 137 LRLFGETLEEGL-LPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCAL 195
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLT---EANS 315
I+ + RV+D L + LI G ++A EL + L + +
Sbjct: 196 IDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQ 255
Query: 316 ISYNSMIK-----GYAVYGQVDDSKRLFEKMPHRSII---------------SLNTMISV 355
+ +SM+ G GQ S L + S + SL+ V
Sbjct: 256 YTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREV 315
Query: 356 IPEMER-NPVTWNSMISGYVQNNLHE-KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
M + N + W +++SGYVQ + + + L+ M I T+S + AC+ LG
Sbjct: 316 FNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGD 375
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
G+ +H H VK+ VG +LV MY+ GSI +A+ +F + N+ +++ ++G
Sbjct: 376 QDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDG 435
Query: 474 ------YSHH------------------------GLGSEAVLLFEIMLEQDIVPNAATFV 503
Y + G+ ++ L + L+ + A
Sbjct: 436 DGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGN 495
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM--- 560
++S R G + + ++F M + V+ +T ++ L + G+ A E DM
Sbjct: 496 SLVSMYSRCGYLVDACQVFDEMNDHNVIS----WTSMISGLAKHGYAARALELFHDMIAA 551
Query: 561 PIELDAVVWGALLSACWFWMNMEVGE---RAAQKMFGL 595
++ + V + A+LSAC ++ G+ R QK GL
Sbjct: 552 GVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGL 589
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 30/291 (10%)
Query: 295 ISMGRIEDAELI-FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
I +GR L+ L E +++ NS++ Y+ V ++ +F+ MP + L
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMP----VGL---- 114
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC--SCL 411
R+ V+W +M S +N +AL+L+ + + T AC S L
Sbjct: 115 -------RDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASEL 167
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
L G +L + ++V VG +L+DM+++ G + + F + V WT L+
Sbjct: 168 FHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLI 227
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
Y+ G EAV LF MLE P+ T +LSAC G ++ + + S +
Sbjct: 228 TRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELG----SFRLGQQLHSLALR 283
Query: 532 PTLEHYTCV----VDLLGRSGH---LHEAEEFIKDMPIELDAVVWGALLSA 575
LE +CV VD+ +S + LH A E MP + + + W ALLS
Sbjct: 284 LGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMP-KHNVMAWTALLSG 333
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/657 (29%), Positives = 332/657 (50%), Gaps = 61/657 (9%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
++ NK + + G + A LFD+ P W ++ G+++ +++ + + MHR
Sbjct: 37 LTLNKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRE 96
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
N+ T +++L ++L + DG ++ L ++ GYE V + ++ + C E+ A
Sbjct: 97 NIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSA 156
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+++FDE+ E + + W+ M+ GY + A +F +M +++V+ WT +I GY K+ D
Sbjct: 157 RQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLL 216
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
E A LF E MP E D +
Sbjct: 217 E-ARVLF-------ERMP---------------------------------EKDLASWKV 235
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
++ Y A +++ + + N +I+G G ++ A+ F+R+ E N S+
Sbjct: 236 MVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASW 295
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
+I GY G VD ++ +F++MP E+N V W++MI GY +
Sbjct: 296 VMIIDGYIKVGDVDAARSVFDQMP-----------------EKNLVAWSTMIGGYAKTGH 338
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSV-LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+L+LY T ++ I + TF++ + ACS LG + + V N+ V T
Sbjct: 339 PYSSLKLYKTFKEQGI-KPDETFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQVVT 397
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SL+DMY++CG+I A F + ++ ++ ++ +++HGL +A+ LF M + +I P
Sbjct: 398 SLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKP 457
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
+ F+GVL+AC GLV EG ++FR M YG+ P+ +HY C+VD+LGR+G L EA
Sbjct: 458 DGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSL 517
Query: 557 IKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
I MP+ +A VWGALLSAC +N+++ E AA ++F ++ YV+L NIYA G+W
Sbjct: 518 ICSMPVAPNATVWGALLSACRVHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQW 577
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+R + V+K+ G SWIEL S +H F + D+++ + I+ LE L ++
Sbjct: 578 DDFSKVRAMIRENRVRKNRGSSWIELGSVIHEFVMGDKSHFDSERIFFMLELLCKDM 634
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 164/332 (49%), Gaps = 14/332 (4%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+E VS N IT G NG++ AR LFD+M R V+SW +M+ GY K E+ L
Sbjct: 164 EERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFE 223
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M ++ ++ ++S + +L+ + + L+ + + SG
Sbjct: 224 RMPEKDL----ASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGC----CKAG 275
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
E++ AK FD + E N W +++ GY++ + A VF +MP+K++V W+ +I GYAK
Sbjct: 276 EMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAK 335
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ +LKL++ +E G P+E +I AC++LG + V + +
Sbjct: 336 T-GHPYSSLKLYKTFKEQGIK-PDETFALGIISACSQLGVPDTAESVICDFVGPSLFPNL 393
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
+ +LI+ Y C + A++V++ ++ L+ +++I + G EDA +F+ + +A
Sbjct: 394 QVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKA 453
Query: 314 N----SISYNSMIKGYAVYGQVDDSKRLFEKM 341
N +++ ++ G V + +RLF +M
Sbjct: 454 NIKPDGVAFLGVLTACNHGGLVGEGRRLFRQM 485
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 196/659 (29%), Positives = 329/659 (49%), Gaps = 86/659 (13%)
Query: 19 VSTNKAITECGRN--GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
V N+ +T C + G AR LFD++P + WNTM+ GYS+ +SL M
Sbjct: 72 VLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEML 131
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R VK + TF + + +L G+Q+H VLK G + FV + L+ Y C +++
Sbjct: 132 RRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLD 191
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+ VFD PK DV+ W +IS Y K V
Sbjct: 192 TARGVFDVC-------------------------------PKADVITWNMIISAYNK-VG 219
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E++ +LF M E + +P T V+ AC++L GK VH + C E + +
Sbjct: 220 KFEESRRLFLVM-EDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLE 278
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
A+I+ Y C D A+ ++ + N + + ++++G ++G I+ A F+++ E + +
Sbjct: 279 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 338
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN-TMISVIPEMERNPVTWNSMISGYVQ 375
S+ +MI GY + ++ LF M ++ TM+SV+
Sbjct: 339 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLT------------------ 380
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
AC+ LG+L+ G+ + ++ + +++++V
Sbjct: 381 -------------------------------ACAHLGALELGEWIRTYIDRNKIKNDLFV 409
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
+L+DMY +CG ++ A++ F +S + WTA++ G + +G G +A+ +F ML+ I
Sbjct: 410 RNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASI 469
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAE 554
+P+ T++GVLSAC GLV++G K F M S +G+ P + HY C+VDLL R+G L EA
Sbjct: 470 LPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAY 529
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
E I++MPI+ +++VWGALL+ C + ++ E +++ L+ + YV+L NIYA
Sbjct: 530 EVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACK 589
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+W ++R+ + +KK PGCS IE+N RVH F DR++P I A L+ +T +L
Sbjct: 590 RWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDL 648
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 210/663 (31%), Positives = 331/663 (49%), Gaps = 93/663 (14%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHC 108
V++WN L + + + E++ M S V + TF +LSV A LN L GKQIH
Sbjct: 871 VIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHG 930
Query: 109 LVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD 168
+V++SG + VG NC ++ YV+ +S
Sbjct: 931 IVVRSGLDQVVSVG--------NC-----------------------LINMYVKTGSVSR 959
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRA 227
A VF +M + D+V W +ISG A S G E+ ++ +F + G +P+++T SV+RA
Sbjct: 960 ARTVFWQMNEVDLVSWNTMISGCALS--GLEECSVGMFVDLLRGGL-LPDQFTVASVLRA 1016
Query: 228 CARLGAFCE-GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
C+ LG C +H +K G D + LI+ Y + A ++ + L +
Sbjct: 1017 CSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLAS 1076
Query: 287 SNSLINGLISMGRIEDAELIF----------NRLTEANSISYNSMIKG------------ 324
N++++G I G A ++ N++T AN+ + G
Sbjct: 1077 WNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVV 1136
Query: 325 -----------------YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
Y G+++ ++R+F ++P + V W
Sbjct: 1137 KRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIP-----------------SPDDVAWT 1179
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+MISG V+N E AL Y MR + TF+ L ACS L +L+QG+ +HA+ VK
Sbjct: 1180 TMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKL 1239
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ +V TSLVDMY++CG+I DA+ F ++ +A+W A++ G + HG EA+ F
Sbjct: 1240 NCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFF 1299
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
E M + + P+ TF+GVLSAC +GLV+E + F SM K YG+ P +EHY+C+VD L R
Sbjct: 1300 EEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSR 1359
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G + EAE+ I MP E A ++ LL+AC ++ E G+R A+K+ L+ +AYV+L
Sbjct: 1360 AGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLL 1419
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SN+YA +W R + VKKDPG SW++L ++VH F DR++ +VIY +
Sbjct: 1420 SNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKV 1479
Query: 667 EHL 669
E++
Sbjct: 1480 EYI 1482
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 144/609 (23%), Positives = 260/609 (42%), Gaps = 74/609 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMP--IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
TN IT + G L +AR LFD P R +V+WN +L ++ A+ + L + RS
Sbjct: 664 TNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKAR--DGFHLFRLLRRS 721
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
V T + + +C S + +H +K G + FV L+ YA I EA
Sbjct: 722 FVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREA 781
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF--------------------IKMPK 178
+ +FD + + +LW++M+ YV L +A +F + K
Sbjct: 782 RVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSK 841
Query: 179 KDVVVW---------TKLISGYAKSVDGCEKAL--KLFRWMRESGE---------NMPNE 218
++V+ W TKL Y DG + K W + GE +M N
Sbjct: 842 QNVLEWQLKQLKAYGTKLFM-YDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINS 900
Query: 219 ------YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
TF ++ A L GK +HG++++ G + S+G LI Y + A
Sbjct: 901 RVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRA 960
Query: 273 MRVYDRLENPCLNASNSLINGLI-------SMGRIED---AELIFNRLTEANSISYNSMI 322
V+ ++ L + N++I+G S+G D L+ ++ T A+ + S +
Sbjct: 961 RTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSL 1020
Query: 323 KG-----YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTWNSM 369
G ++ + + + ++I + + + E E + +WN+M
Sbjct: 1021 GGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAM 1080
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ GY+ + KAL+LY+ M++ + T + A L L+QG+ + A +VK F
Sbjct: 1081 MHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGF 1140
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+++V + ++DMY +CG + A+ F+ I SP+ AWT +++G +G A+ +
Sbjct: 1141 NLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHH 1200
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
M + P+ TF ++ AC + +G +I + T +VD+ + G+
Sbjct: 1201 MRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGN 1260
Query: 550 LHEAEEFIK 558
+ +A K
Sbjct: 1261 IEDARGLFK 1269
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 116/529 (21%), Positives = 219/529 (41%), Gaps = 81/529 (15%)
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP--KKDVVVWTKLISGYAKSVDG 197
R+ H + L + ++ Y +C +S A +F P +D+V W ++S +A D
Sbjct: 651 RILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHA---DK 707
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
LFR +R S + +T V + C + + +HG +K G ++D + G
Sbjct: 708 ARDGFHLFRLLRRSFVSA-TRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAG 766
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL+ Y GRI +A ++F+ + + +
Sbjct: 767 ALVNIYA-------------------------------KFGRIREARVLFDGMGLRDVVL 795
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSI----ISLNTMISVIPEMER------------ 361
+N M+K Y G ++ LF + + ++L T+ V+ +
Sbjct: 796 WNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAY 855
Query: 362 --------------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
+ + WN +S ++Q +A+ ++ M + TF V+
Sbjct: 856 GTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSV 915
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
+ L L+ G+ +H +V++ + V VG L++MY + GS++ A+ F ++ ++ +W
Sbjct: 916 VAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSW 975
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR-AGLVNEGMKIFRSMK 526
+++G + GL +V +F +L ++P+ T VL AC G + +I
Sbjct: 976 NTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAM 1035
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAE-EFIKDMPIEL---DAVVWGALLSACW----- 577
GVV T ++D+ +SG + EAE F+ +L +A++ G ++S +
Sbjct: 1036 KAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALR 1095
Query: 578 -FWMNMEVGERAAQKMFGLDKKPISAYVIL---SNIYAVLGKWGKKMDI 622
+ + E GERA Q K V L I AV+ K G +D+
Sbjct: 1096 LYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDL 1144
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 128/311 (41%), Gaps = 64/311 (20%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ +AR +F+++P V+W TM+ G + + + +L M S V+ +E TF+T++
Sbjct: 1158 GEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLV 1217
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ L +L G+QIH +K FV + L+ YA C IE+A+ +F +
Sbjct: 1218 KACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIA 1277
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+VG Q E+AL+ F M+
Sbjct: 1278 SWNAMIVGLAQHG--------------------------------NAEEALQFFEEMKSR 1305
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+ TF V+ AC+ G E E F
Sbjct: 1306 GVT-PDRVTFIGVLSACSHSGLVSE----------------------------AYENFYS 1336
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-EANSISYNSMIKGYAVYGQ 330
++Y P + + L++ L GRI +AE + + + EA++ Y +++ V
Sbjct: 1337 MQKIYGI--EPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVD 1394
Query: 331 VDDSKRLFEKM 341
+ KR+ EK+
Sbjct: 1395 RETGKRVAEKL 1405
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 14/181 (7%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI- 459
FS+L HA + L G+ HA ++ + + ++ +L+ MYS+CGS++ A+ F +
Sbjct: 630 FSILRHAIAA-SDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTP 688
Query: 460 -SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+S ++ W A+++ +H + LF ++ + T V C L++
Sbjct: 689 DTSRDLVTWNAILS--AHADKARDGFHLFRLLRRSFVSATRHTLAPVFKMC----LLSAS 742
Query: 519 MKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
S+ Y V L+ V V++ + G + EA M + D V+W ++
Sbjct: 743 PSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLR-DVVLWNVMMK 801
Query: 575 A 575
A
Sbjct: 802 A 802
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 205/669 (30%), Positives = 330/669 (49%), Gaps = 62/669 (9%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
NG L A+ LFD +P + V WN ML GY K ++ + M S +K N TF+ +
Sbjct: 106 NGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACV 165
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
LSVCA L G Q+H + + G E V + LL Y+ C ++ A+++FD
Sbjct: 166 LSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFD------- 218
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
P+ D+V W +ISGY ++ E A LFR M
Sbjct: 219 ------------------------TSPQSDLVSWNGIISGYVQNGLMGE-AEHLFRGMIS 253
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+G P+ TF S + L + K +HG +I+ D + ALI+ Y C +
Sbjct: 254 AGIK-PDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVE 312
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA 326
A ++ + + ++I+G + G+ ++A F L + S++++S+ +A
Sbjct: 313 MAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFA 372
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNS 368
++ K L + + + S I +M E++ + WNS
Sbjct: 373 GLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNS 432
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACSCLGSLQQGQLLHAHLV 425
MI+ QN +A+ L+ R++ ++ TR + S AC+ L +L G+ +H ++
Sbjct: 433 MITSCSQNGRPGEAINLF---RQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMI 489
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K P S++Y +SL+DMY++CG++N ++ F + N +W ++++ Y +HG E +
Sbjct: 490 KGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLA 549
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
LF ML I P+ TF+G++SAC AG V+EG++ + M + YG+ +EHY CV D+
Sbjct: 550 LFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMF 609
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L EA E I MP DA VWG LL AC N+E+ E A++ +F LD YV
Sbjct: 610 GRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYV 669
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+L+N+ A GKW K + +R + V+K PG SWIE+N+ H F D ++P IY+
Sbjct: 670 LLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYS 729
Query: 665 TLEHLTANL 673
L+ L L
Sbjct: 730 VLDSLLLEL 738
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/568 (25%), Positives = 261/568 (45%), Gaps = 56/568 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G L A+NLF + + +WN M+ G++ +F+ +L M + V ++ TF
Sbjct: 4 RTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPY 63
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
++ C L S+ GK +H V G + FVGS L+ YA + +A+ +FD +
Sbjct: 64 VVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI---- 119
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
P+KD V+W +++GY K+ D A+K+F MR
Sbjct: 120 ---------------------------PQKDSVLWNVMLNGYVKNGDS-GNAIKIFLEMR 151
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
S E PN TF V+ CA G +HG+ + CG E D + L+ Y C+
Sbjct: 152 HS-EIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCL 210
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGY 325
A +++D L + N +I+G + G + +AE +F + A +SI++ S +
Sbjct: 211 QAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCV 270
Query: 326 ----------AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER--------NPVTWN 367
++G + + + ++I + + ++ + V
Sbjct: 271 NELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCT 330
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+MISGYV N +++AL+ + + + + T TFS +F A + L +L G+ LH ++KT
Sbjct: 331 TMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT 390
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ +VG++++DMY++CG ++ A F+ I+ + W +++ S +G EA+ LF
Sbjct: 391 KLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLF 450
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
M + + + G LSAC ++ G +I M + L + ++D+ +
Sbjct: 451 RQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKC 510
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSA 575
G+L+ + M E + V W +++SA
Sbjct: 511 GNLNFSRRVFDRMQ-ERNEVSWNSIISA 537
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 200/444 (45%), Gaps = 35/444 (7%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
YV+ + DA ++F + W +I G+ + AL + M +G + P++Y
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTM-MGQFNYALLFYLKMLGAGVS-PDKY 59
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
TF V++AC L + GK+VH + G + D +G +LI+ Y A ++D +
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSK 335
N ++NG + G +A IF + + NS+++ ++ A +D
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 336 RLFEKMPHRSIIS---------LNTMISVIPE----------MERNP----VTWNSMISG 372
+L H +S NT++++ + + +P V+WN +ISG
Sbjct: 180 QL-----HGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISG 234
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
YVQN L +A L+ M I TF+ + L SL+ + +H ++++ +
Sbjct: 235 YVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLD 294
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V++ ++L+D+Y +C + AQ SS + T +++GY +G EA+ F +++
Sbjct: 295 VFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ 354
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ + P + TF + A +N G ++ S+ + + ++D+ + G L
Sbjct: 355 ERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDL 414
Query: 553 AEEFIKDMPIELDAVVWGALLSAC 576
A + E DA+ W +++++C
Sbjct: 415 ACRVFNRI-TEKDAICWNSMITSC 437
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY R GS+ DA+ F ++ +AW ++ G++ G + A+L + ML + P+ T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
F V+ AC V G + ++ G+ + + ++ L +GHL +A+ ++P
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 562 IELDAVVWGALLSA 575
+ D+V+W +L+
Sbjct: 121 -QKDSVLWNVMLNG 133
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 326/641 (50%), Gaps = 87/641 (13%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
L + + +L C +N+ KQIH L++K+G FV S L+ F A
Sbjct: 26 LEQHPYLNLLEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCA----------- 71
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
+ +L ++L L F+ + K +V +W LI GY+ S
Sbjct: 72 ---VSPSGDLSYALSL------------FEENQQHHKHNVFIWNSLIRGYSLSSSPLSSL 116
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
R + + PN +TF + ++C + A EGK +H +K F+ + ++I
Sbjct: 117 HLFSRMLYYGVQ--PNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIH 174
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
Y D A V+D+ + +LI G +S G ++DA +F+ + + +S+N+M
Sbjct: 175 MYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAM 234
Query: 322 IKGYAVYGQVDDSKRLFEKM------PHRSIISL-------------------------- 349
I GY G+ +++ F +M P++S + +
Sbjct: 235 ISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGF 294
Query: 350 -------NTMIS---------VIPEM-----ERNPVTWNSMISGYVQNNLHEKALQLYMT 388
N +I + E+ E++ ++WN+MI GY +L+E+AL L+
Sbjct: 295 GSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEV 354
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCG 447
M + + TF + HAC+CLG+L G+ +HA++ K SN + TSL+DMY++CG
Sbjct: 355 MLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCG 414
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV-PNAATFVGVL 506
I A+ F S+ S N+A+W A+++G++ HG A+ LF M+ + + P+ TFVGVL
Sbjct: 415 CIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVL 474
Query: 507 SACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
SAC +AGLV+ G + FRSM + YG+ P L+HY C++DLL R+ EAE +K+M +E D
Sbjct: 475 SACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPD 534
Query: 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKR 625
+WG+LLSAC +E GE A+++F L+ + A+V+LSNIYA G+W IR R
Sbjct: 535 GAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTR 594
Query: 626 LTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
L +KK PGC+ IE++ VH F V D+ +P CN IY L
Sbjct: 595 LNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKML 635
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 131/529 (24%), Positives = 236/529 (44%), Gaps = 32/529 (6%)
Query: 31 NGQLVTARNLFD---QMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTF 87
+G L A +LF+ Q V WN+++ GYS + SL L S M V+ N TF
Sbjct: 75 SGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTF 134
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
+ C + + +GKQ+H LK V + ++ YA+ E++ A+ VFD+
Sbjct: 135 PFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSL 194
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
+ + ++ ++ GYV + DA +F ++P KDVV W +ISGY +S E+A+ F
Sbjct: 195 RDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQS-GRFEEAIVCFYE 253
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M+E+ +PN+ T V+ AC + GK + + GF + + ALI+ YC C
Sbjct: 254 MQEANV-LPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCG 312
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSISYNSMIK 323
D A ++D +E + + N++I G + E+A E++ + N +++ ++
Sbjct: 313 ETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILH 372
Query: 324 GYAVYGQVDDSKRLFEKMPHR-----------SIISLNTMISVIPEME--------RNPV 364
A G +D K + + S+I + I E RN
Sbjct: 373 ACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLA 432
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQG-QLLHA 422
+WN+M+SG+ + E+AL L+ M + R TF + AC+ G + G Q +
Sbjct: 433 SWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRS 492
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGS 481
+ + ++D+ +R +A+ ++ P+ A W +L++ HG
Sbjct: 493 MIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVE 552
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
+ E + + + NA FV + + AG ++ +I + G+
Sbjct: 553 FGEYVAERLFQLE-PENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGM 600
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 188/441 (42%), Gaps = 62/441 (14%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS IT G L AR LFD++P++ VVSWN M+ GY + +F+E++ M +
Sbjct: 198 VSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEA 257
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
NV N++T +LS C S GK I V +G+ + + L+ Y C E + A
Sbjct: 258 NVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIA 317
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +FD + E + + W+ M+ GY +L +A +F M + +V
Sbjct: 318 RELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNV----------------- 360
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK-CGFEFDESIGG 257
PN+ TF ++ ACA LGA GK VH + K + S+
Sbjct: 361 ----------------KPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWT 404
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-----ELIFNRLTE 312
+LI+ Y C + A RV+ + + L + N++++G G E A E++ L
Sbjct: 405 SLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFR 464
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
+ I++ ++ G VD + F M IS P+++ + MI
Sbjct: 465 PDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGIS--------PKLQH----YGCMIDL 512
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE-- 430
+ E+A L M+ + ++ + + L AC G ++ G+ + L + E
Sbjct: 513 LARAEKFEEAEIL---MKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENA 569
Query: 431 ------SNVYVGTSLVDMYSR 445
SN+Y G D +R
Sbjct: 570 GAFVLLSNIYAGAGRWDDVAR 590
>gi|357478575|ref|XP_003609573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510628|gb|AES91770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 665
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 184/638 (28%), Positives = 319/638 (50%), Gaps = 58/638 (9%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++ I R+G++ AR LFD+MP R V+WN ML YS+ + ++ L +M R
Sbjct: 5 LIRATSEIVSLARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRR 64
Query: 78 -SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
S+ K + ++S ++ CA + + G ++H LV+ SGY+ V + L+ Y CF
Sbjct: 65 ISDSKPDNFSYSAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPN 124
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+A++VFDE++ NE+ W +L Y AF++F MP+K + W +I+ +A+ +
Sbjct: 125 DARKVFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGE 184
Query: 197 GCEKALKLFRWMRESGENM--PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
E L LF+ E EN+ P+++TF +++ AC G ++H +IK G+
Sbjct: 185 -VEACLHLFK---EMCENLYQPDQWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAME 240
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+ +++ FY E A++V FN N
Sbjct: 241 VNNSIVSFYAKLECHGDAVKV-------------------------------FNSGGAFN 269
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
+S+N++I + G + F++ P E+N V+W SMI GY
Sbjct: 270 QVSWNAIIDAHMKVGDTQKALLAFQQAP-----------------EKNIVSWTSMIVGYT 312
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
+N + AL L++ M++ + + HAC+ L L G+++H+ ++ + ++
Sbjct: 313 RNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDKYLF 372
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
VG SL++MY++CG I ++ + I+ ++ +W +++ + +G G+EA+ +F M+
Sbjct: 373 VGNSLINMYAKCGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMVASG 432
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEA 553
+ P+ TF G+L C GL++EG F+SM YG+V ++H C+VD+LGR G++ EA
Sbjct: 433 VRPDEVTFTGLLMTCSHLGLIDEGFAFFQSMSLEYGLVQGMDHVACMVDMLGRGGYVAEA 492
Query: 554 EEFIKDM-PIELDAV-VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
+ + D LL AC ++ G + + L+ K YV+LSN+Y
Sbjct: 493 QSLARKYSKTSRDKTNSCEVLLGACHAHGDLGTGSSVGEYVKNLEPKKEVGYVLLSNMYC 552
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
GKW + +RK + VKK PGCSWIE+ + V AF
Sbjct: 553 ASGKWKEAEMVRKEMMDQGVKKVPGCSWIEIRNVVTAF 590
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 196/659 (29%), Positives = 329/659 (49%), Gaps = 86/659 (13%)
Query: 19 VSTNKAITECGRN--GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
V N+ +T C + G AR LFD++P + WNTM+ GYS+ +SL M
Sbjct: 51 VLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEML 110
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R VK + TF + + +L G+Q+H VLK G + FV + L+ Y C +++
Sbjct: 111 RRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLD 170
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+ VFD PK DV+ W +IS Y K V
Sbjct: 171 TARGVFDVC-------------------------------PKADVITWNMIISAYNK-VG 198
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E++ +LF M E + +P T V+ AC++L GK VH + C E + +
Sbjct: 199 KFEESRRLFLVM-EDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLE 257
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
A+I+ Y C D A+ ++ + N + + ++++G ++G I+ A F+++ E + +
Sbjct: 258 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 317
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN-TMISVIPEMERNPVTWNSMISGYVQ 375
S+ +MI GY + ++ LF M ++ TM+SV+
Sbjct: 318 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLT------------------ 359
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
AC+ LG+L+ G+ + ++ + +++++V
Sbjct: 360 -------------------------------ACAHLGALELGEWIRTYIDRNKIKNDLFV 388
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
+L+DMY +CG ++ A++ F +S + WTA++ G + +G G +A+ +F ML+ I
Sbjct: 389 RNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASI 448
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAE 554
+P+ T++GVLSAC GLV++G K F M S +G+ P + HY C+VDLL R+G L EA
Sbjct: 449 LPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAY 508
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
E I++MPI+ +++VWGALL+ C + ++ E +++ L+ + YV+L NIYA
Sbjct: 509 EVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACK 568
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+W ++R+ + +KK PGCS IE+N RVH F DR++P I A L+ +T +L
Sbjct: 569 RWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDL 627
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 211/719 (29%), Positives = 350/719 (48%), Gaps = 101/719 (14%)
Query: 2 KLYATQSQTLMTQE---TLIVSTNKAITECGRNGQLVTARNLFDQMPIR-TVVSWNTMLC 57
+ Y + L +E +++ N + + L AR LFD+MP + VVSWN+M+
Sbjct: 196 RRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMIS 255
Query: 58 GYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYEC 117
YS + E+L L M ++++ N TF L C + + G IH VLKS Y
Sbjct: 256 AYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYI 315
Query: 118 FEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
FV + L+ YA + M +A ++F M
Sbjct: 316 NVFVANALIAMYA-------------------------------RFGKMGEAANIFYNMD 344
Query: 178 KKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
D + W ++SG+ + +G +AL+ + MR++G+ P+ S+I A AR G
Sbjct: 345 DWDTISWNSMLSGFVQ--NGLYHEALQFYHEMRDAGQK-PDLVAVISIIAASARSGNTLH 401
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFY---CGCEAFDGAMRVYDRLENPCLNASNSLING 293
G +H +K G + D +G +L++ Y C + D ++D++ + + + ++I G
Sbjct: 402 GMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC---IFDKMPDKDVVSWTTIIAG 458
Query: 294 LISMG------------RIEDAEL----------------IFNRLTEANS---------- 315
G ++E +L + + + E +S
Sbjct: 459 HAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDL 518
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
+ N ++ Y G VD + R+FE + + ++S W SMIS YV
Sbjct: 519 VLQNGIVDVYGECGNVDYAARMFELIEFKDVVS-----------------WTSMISCYVH 561
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N L +AL+L+ M++ ++ + + A + L +L++G+ +H L++ F +
Sbjct: 562 NGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSL 621
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
++LVDMY+RCG++ ++ F+ I + ++ WT+++N Y HG G A+ LF M ++ I
Sbjct: 622 ASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESI 681
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
P+ FV VL AC +GL+NEG + SMK Y + P EHY C+VDLLGR+ HL EA
Sbjct: 682 APDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAY 741
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
+F+K M +E A VW ALL AC N E+GE AAQK+ +D + YV++SN+Y+
Sbjct: 742 QFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAER 801
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+W +R R+ +KK+PGCSWIE+ ++VH F D+++P IY+ L +T L
Sbjct: 802 RWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKL 860
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 145/572 (25%), Positives = 272/572 (47%), Gaps = 62/572 (10%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G LV A LFD MP +T+ +WN M+ Y + SL L M S + L+ TF
Sbjct: 125 GKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFP 184
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
IL C L G ++H L +K GY FV + ++ Y C ++ A+++FD + E
Sbjct: 185 CILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPE- 243
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
K+DVV W +IS Y+ + E AL+LF M
Sbjct: 244 -----------------------------KEDVVSWNSMISAYSSNGQSIE-ALRLFGEM 273
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+++ PN YTF + ++AC +G +H ++K + + + ALI Y
Sbjct: 274 QKASL-APNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGK 332
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE---------------A 313
A ++ +++ + NS+++G + G +A ++ + + A
Sbjct: 333 MGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAA 392
Query: 314 NSISYNSM----IKGYAVYGQVDDSKRLFEKMP--HRSIISLNTMISVIPEM-ERNPVTW 366
++ S N++ I YA+ +D ++ + + S+ M + +M +++ V+W
Sbjct: 393 SARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSW 452
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
++I+G+ QN H +AL+L+ ++ ID S + ACS L + + +H+++++
Sbjct: 453 TTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIR 512
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
S++ + +VD+Y CG+++ A F I +V +WT++++ Y H+GL +EA+ L
Sbjct: 513 KGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALEL 571
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
F +M E + P++ + V +LSA + +G +I + G V + +VD+ R
Sbjct: 572 FHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYAR 631
Query: 547 SGHLHEAE---EFIKDMPIELDAVVWGALLSA 575
G L ++ FI++ D V+W ++++A
Sbjct: 632 CGTLEKSRNVFNFIRNK----DLVLWTSMINA 659
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 133/539 (24%), Positives = 240/539 (44%), Gaps = 70/539 (12%)
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
F L + S L+E +S++L +C +L +G+Q+H + S
Sbjct: 60 FQSLTDLFANQSPSQFSLDEA-YSSVLELCGSKKALSEGQQVHA----------HMITSN 108
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
LF ++ L + ++ Y +C + DA +F MP K + W
Sbjct: 109 ALF--------------------NSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTW 148
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
+I Y + + +L+L+R MR SG + + TF +++AC L G VHGL
Sbjct: 149 NAMIGAYVTNGEPL-GSLELYREMRVSGIPL-DACTFPCILKACGLLKDRRYGAEVHGLA 206
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL-ENPCLNASNSLINGLISMGRIEDA 303
IK G+ + +++ Y C +GA +++DR+ E + + NS+I+ S G+ +A
Sbjct: 207 IKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEA 266
Query: 304 ELIFNRLTEA----NSISY---------NSMIK-GYAVYGQVDDSKRLFEKMPHRSIISL 349
+F + +A N+ ++ +S IK G ++ V S ++I++
Sbjct: 267 LRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAM 326
Query: 350 NTMISVIPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
+ E + ++WNSM+SG+VQN L+ +ALQ Y MR
Sbjct: 327 YARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAV 386
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
+ A + G+ G +HA+ +K +S++ VG SLVDMY++ S+ F +
Sbjct: 387 ISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPD 446
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+V +WT ++ G++ +G S A+ LF + + I + +L AC G+K+
Sbjct: 447 KDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLAC-------SGLKL 499
Query: 522 FRSMK---SYGVVPTLEHYTC---VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
S+K SY + L +VD+ G G++ A + + + D V W +++S
Sbjct: 500 ISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS 557
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 7/180 (3%)
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
+S + C +L +GQ +HAH++ + ++V++ T LV MY +CG + DA+ F
Sbjct: 80 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 139
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE- 517
+ + W A++ Y +G ++ L+ M I +A TF +L AC GL+ +
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKAC---GLLKDR 196
Query: 518 --GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G ++ G V + +V + + L+ A + MP + D V W +++SA
Sbjct: 197 RYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISA 256
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 207/705 (29%), Positives = 348/705 (49%), Gaps = 99/705 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV + K I +G + +R+ FD + + + SWN+++ Y ++ K+ E+++ V+ +
Sbjct: 54 IVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFS 113
Query: 78 ----SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+++ + TF IL C SL+DGK++HC V K G+E FV + L+ Y+
Sbjct: 114 MCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYS--- 167
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+ ++ A VF+ MP KDV W +ISG+ +
Sbjct: 168 ----------------------------RYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ + AL + M+ G M + T S++ CA+ G ++H ++K G + D
Sbjct: 200 NGNAA-GALGVLNRMKGEGVKM-DTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDV 257
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL---------------ISMG 298
+ ALI Y A V+D++E L + NS+I + +G
Sbjct: 258 FVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLG 317
Query: 299 RIEDAEL-------IFNRLTE------------------ANSISYNSMIKGYAVYGQVDD 333
I L IF++L++ + + N+++ YA G ++
Sbjct: 318 GIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNC 377
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
+ +F+++P + IS WN++++GY QN L +A+ Y M +
Sbjct: 378 AHTVFDQLPRKDTIS-----------------WNTLVTGYTQNGLASEAIDAYNMMEECR 420
Query: 394 -IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ T+ + A S +G+LQQG +HA L+K +V+V T L+D+Y +CG + DA
Sbjct: 421 DTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDA 480
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ F I W A++ HG G EA+ LF+ ML + + + TFV +LSAC +
Sbjct: 481 MSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHS 540
Query: 513 GLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GLV+EG K F M K YG+ P+L+HY C+VDLLGR+G+L +A E +++MPI+ DA +WGA
Sbjct: 541 GLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGA 600
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
LLSAC + N E+G A+ ++ +D + + YV+LSNIYA KW + +R +
Sbjct: 601 LLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGL 660
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+K PG S + + S+ F ++ +P IY L+ L+A + S+
Sbjct: 661 RKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSL 705
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/563 (22%), Positives = 242/563 (42%), Gaps = 105/563 (18%)
Query: 54 TMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS 113
++L SK+ K S +++H+ + F+ + + C +N+ K++H L+L
Sbjct: 3 SLLKSVSKFYK-----SATTSLHK------DADFNALFNSCVNVNAT---KKLHALLLVF 48
Query: 114 GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
G + + L+ Y +I ++ FD +H+ N W+ ++ YV+ +A +
Sbjct: 49 GKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCV 108
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
+L S M G P+ YTF +++AC L
Sbjct: 109 -----------NQLFS------------------MCGGGHLRPDFYTFPPILKACVSL-- 137
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
+GK VH + K GFE D + +L+ Y D A +V+ + + + N++I+G
Sbjct: 138 -VDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISG 196
Query: 294 LISMGRIEDAELIFNRLT---------------------------------------EAN 314
G A + NR+ +++
Sbjct: 197 FCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSD 256
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
N++I Y+ +G++ D++ +F++M R ++S WNS+I+ Y
Sbjct: 257 VFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVS-----------------WNSIIAAYE 299
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP-FESNV 433
QNN AL+ + M+ I T L S L + + + +++ + +V
Sbjct: 300 QNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDV 359
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE- 492
+G +LV+MY++ G +N A F + + +W L+ GY+ +GL SEA+ + +M E
Sbjct: 360 VIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEEC 419
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+D +PN T+V ++ A G + +GMKI + + + TC++DL G+ G L +
Sbjct: 420 RDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLED 479
Query: 553 AEEFIKDMPIELDAVVWGALLSA 575
A ++P + +V W A++++
Sbjct: 480 AMSLFYEIPRD-TSVPWNAIIAS 501
>gi|326507326|dbj|BAJ95740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 798
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 203/660 (30%), Positives = 319/660 (48%), Gaps = 82/660 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G + +AR LFD MP R VVS+ TM+ K + E++ L +V T S
Sbjct: 163 KAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISG 222
Query: 90 ILSVCAQLNSL-IDGKQIHCLVLKSG--YECF--------EF------VGSG-------- 124
+ N+L + K + C V +G + C EF VGS
Sbjct: 223 FVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFES 282
Query: 125 -------LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
L+ Y + A++VFDE+ + + W+ +L Y + + A V MP
Sbjct: 283 SIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMP 342
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+++ V W LI+ + + + E A+KL+ M G PN F SV+ ACA L G
Sbjct: 343 ERNEVSWGTLIARHEQRGNAAE-AVKLYSQMLADGCR-PNISCFSSVLSACATLEDLRGG 400
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
+H +K G + + +LI+ YC C+
Sbjct: 401 ARIHARSLKMGSSTNVFVSSSLIDMYCKCK------------------------------ 430
Query: 298 GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
+ DA+ IF+ L E N + +NS+ GY+ G++ ++ LF+KMP
Sbjct: 431 -KCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMP--------------- 474
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
RN +WN++ISGY QN AL+ + M TFS + AC+ L SL G
Sbjct: 475 --ARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTG 532
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
++ HA +K E ++++GT+L DMY++ G + ++ F + N WTA++ G + +
Sbjct: 533 KMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAEN 592
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
G E++LL E M+ + PN TF+ +L AC GLV + + F M+++G+ P +HY
Sbjct: 593 GFAEESILLLEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQAWGISPKEKHY 652
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
TC+VD+L R+G L EAE + P + +A W ALLSAC + N E+GERAA+++ L K
Sbjct: 653 TCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGK 712
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+ YV+LSN+YA G+W IR + +KKD GCSW+++ + HAF + +P
Sbjct: 713 DNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGGCSWVQVRGQYHAFFSWEAKHP 772
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 132/534 (24%), Positives = 223/534 (41%), Gaps = 117/534 (21%)
Query: 106 IHCLVLKSGYECFEFVGSGLLFFYA-------------NCF------------------- 133
+H ++SG V S LL YA +C
Sbjct: 104 LHAHAVRSGVAADTSVASHLLTTYAAFARAAECDRAFGDCVAAGAASPFTYDFMVHEHVK 163
Query: 134 --EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+I A+ +FD + E N + ++ M+ ++ +++A +++ + P V +T ISG+
Sbjct: 164 AGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGF 223
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
++ + AL +FR M G PN TF +I+AC G F + G IK F F
Sbjct: 224 VRN-ELHHNALGVFRKMVSCGVR-PNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNF-F 280
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
+ SI NSLI + MG A +F+ +
Sbjct: 281 ESSI-----------------------------EVQNSLITLYLRMGDAAAARKVFDEMD 311
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
+ +S+ +++ Y+ G +D ++R+ + MP ERN V+W ++I+
Sbjct: 312 VKDVVSWTALLDVYSESGDLDGARRVLDAMP-----------------ERNEVSWGTLIA 354
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
+ Q +A++LY M S FS + AC+ L L+ G +HA +K +
Sbjct: 355 RHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSST 414
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
NV+V +SL+DMY +C DAQ F ++ N+ W +L +GYS++G EA+ LF+ M
Sbjct: 415 NVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMP 474
Query: 492 EQDI-------------------------------VPNAATFVGVLSACVR-AGLVNEGM 519
+++ VP TF VL AC LV M
Sbjct: 475 ARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKM 534
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+++K G+ ++ T + D+ +SG L ++ MP E + V W A++
Sbjct: 535 AHAKTIK-LGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMP-ERNDVTWTAMI 586
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 151/338 (44%), Gaps = 59/338 (17%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E IV N + NG++V A LF +MP R + SWNT++ GY++ +F ++L +
Sbjct: 444 EKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNA 503
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M S E TFS++L CA L SL+ GK H +K G E F+G+ L YA +
Sbjct: 504 MLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGD 563
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
++ +KR+F ++ E N++ W+ M+ G + +G+A
Sbjct: 564 LQSSKRMFYQMPERNDVTWTAMIQGLAE--------------------------NGFA-- 595
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
E+++ L M +G PNE+TF +++ AC+ HG L++ + E
Sbjct: 596 ----EESILLLEDMMATGMT-PNEHTFLALLFACS-----------HGGLVEQAIHYFEK 639
Query: 255 IGGALI-----EFYCGCEAFDGAMRVYDR----LENPCLNASNS---LINGLISMGRIED 302
+ I + C + A R+ + ++ P + +NS L++ + E
Sbjct: 640 MQAWGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSACNTYKNEEI 699
Query: 303 AELIFNRLTE---ANSISYNSMIKGYAVYGQVDDSKRL 337
E RL E N+ Y + YA G+ D+ R+
Sbjct: 700 GERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARI 737
>gi|356519999|ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Glycine max]
Length = 629
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/650 (29%), Positives = 323/650 (49%), Gaps = 59/650 (9%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+ + T I R+GQ+ AR LFD++P + V+WN ML YS + +SLSL
Sbjct: 2 RSYLFRTTPKIVALARSGQISDARKLFDEIPHKDSVAWNAMLTAYSHVGLYQQSLSLFGC 61
Query: 75 MHRSNVKLNETTFSTILSVCAQLNS--LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M S+ K + +FS +L+ CA + + G +H LV+ SGY V + L+ Y C
Sbjct: 62 MRISHSKPDNFSFSAVLNACACAGASYVRFGATLHALVVVSGYLSSLPVANSLIDMYGKC 121
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
++A++VFDE + NE+ W ++ Y + A ++F MP++ V+ W +I G+A
Sbjct: 122 LLPDDARKVFDETSDSNEVTWCSLMFAYANSCRLGVALELFRSMPERVVIAWNIMIVGHA 181
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+ + E L LF+ M S P+++TF ++I ACA G +VHG +IK G+
Sbjct: 182 RRGE-VEACLHLFKEMCGS-LCQPDQWTFSALINACAVSMEMLYGCMVHGFVIKSGWSSA 239
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+ +++ FY E D AM+V FN
Sbjct: 240 MEVKNSMLSFYAKLECQDDAMKV-------------------------------FNSFGC 268
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
N +S+N++I + G + F+K P ERN V+W SMI+G
Sbjct: 269 FNQVSWNAIIDAHMKLGDTQKAFLAFQKAP-----------------ERNIVSWTSMIAG 311
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
Y +N E AL +++ + + ++ + HAC+ L L G+++H +++ +
Sbjct: 312 YTRNGNGELALSMFLDLTRNSVQLDDLVAGAVLHACASLAILVHGRMVHGCIIRHGLDKY 371
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
+YVG SLV+MY++CG I ++ +F I ++ +W +++ + HG +EA+ L+ M+
Sbjct: 372 LYVGNSLVNMYAKCGDIKGSRLAFHDILDKDLISWNSMLFAFGLHGRANEAICLYREMVA 431
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
+ P+ TF G+L C GL++EG F+SM +G+ ++H C+VD+LGR G++
Sbjct: 432 SGVKPDEVTFTGLLMTCSHLGLISEGFAFFQSMCLEFGLSHGMDHVACMVDMLGRGGYVA 491
Query: 552 E----AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
E AE++ K ++ LL AC+ ++ G + + L+ + YV+LS
Sbjct: 492 EARSLAEKYSKTSITRTNSC--EVLLGACYAHGDLGTGSSVGEYLKNLEPEKEVGYVLLS 549
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
N+Y GKW + +RK + VKK PG SWIE+ + V +F + P
Sbjct: 550 NLYCASGKWREAEMVRKAMLDQGVKKVPGSSWIEIRNEVTSFVSGNNAYP 599
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/662 (29%), Positives = 342/662 (51%), Gaps = 61/662 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A+N+FD + +V WN ML G+ + +E++ + M R ++ +E TF +IL C
Sbjct: 389 AKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTY 448
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L+S GKQ+HC+ +K+ + FV + L Y+ I +AK +F +
Sbjct: 449 LSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI----------- 497
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
P KD + W L G A++++ E+A+ + + MR G P
Sbjct: 498 --------------------PYKDSISWNALTVGLAQNLEE-EEAVCMLKRMRLHGIT-P 535
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
++ +F + I AC+ + A GK +H L IK G + ++G +LI+ Y + + +++
Sbjct: 536 DDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 595
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKG------YA 326
+++ + N+LI G + ++A +F ++ + +S++++S++ G A
Sbjct: 596 AQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSA 655
Query: 327 VYGQVD----DSKRLFEK-----------MPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
+ QV S L++ + + + N +++ +P+ +N W ++IS
Sbjct: 656 IGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD-HKNLFEWTAIIS 714
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
GY QN + +L + MR + +TF+ + ACS + + G+ +H + K+ F S
Sbjct: 715 GYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGS 774
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIM 490
++L+DMYS+CG + + +F + + ++ W +++ G++ +G EA+LLF+ M
Sbjct: 775 YETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKM 834
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGH 549
E I P+ TF+GVL AC +GL++EG F SM K YG+ P L+HY C +DLLGR GH
Sbjct: 835 EELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGH 894
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
L EA+E I +P D VVW L+AC + E G+ AA+K+ L+ + S YV+LS++
Sbjct: 895 LQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSL 954
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+A G W + R+ + V K PGCSWI + ++ F V+D+ +P+ IY L L
Sbjct: 955 HAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDL 1014
Query: 670 TA 671
T
Sbjct: 1015 TG 1016
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 140/575 (24%), Positives = 250/575 (43%), Gaps = 104/575 (18%)
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ ++ + +LS C+++ L G+Q+HC V+KSG+ F + L+ YA C ++ A+R
Sbjct: 165 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 224
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI-------------------------- 174
VFD + + + WS M+ Y + +A +F
Sbjct: 225 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 284
Query: 175 ---------KMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSV 224
KMP V W +ISG+A+S G E L L++ MR G P TF S+
Sbjct: 285 LDHATALLKKMPTPSTVAWNAVISGHAQS--GLEFNVLGLYKDMRSWGL-WPTRSTFASM 341
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+ A A + AF EG+ +H + G + + +G +LI Y C A V+D +
Sbjct: 342 LSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNI 401
Query: 285 NASNSLINGLISMGRIEDAELIFNRLT----EANSISY---------------------- 318
N+++ G + E+A +F + + + ++
Sbjct: 402 VMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCV 461
Query: 319 -------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
N+ + Y+ YG + D+K LF +P++ IS
Sbjct: 462 TIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSIS----------------- 504
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WN++ G QN E+A+ + MR I +FS +ACS + + + G+ +H +
Sbjct: 505 WNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAI 564
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K SN VG+SL+D+YS+ G + ++ F+ + + ++ AL+ G+ + EA+
Sbjct: 565 KYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQ 624
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNE--GMKIFRSMKSYGVVPTLEHYTCVVDL 543
LF+ +L+ + P++ TF +LS C +G +N G ++ GV+ + V L
Sbjct: 625 LFQQVLKDGLKPSSVTFSSILSGC--SGSLNSAIGKQVHCYTLKSGVL--YDDTLLGVSL 680
Query: 544 LG---RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G +S L +A + + +MP + W A++S
Sbjct: 681 AGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 715
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 141/592 (23%), Positives = 261/592 (44%), Gaps = 95/592 (16%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
I+ +G+L A L +MP + V+WN ++ G+++ L L M +
Sbjct: 276 ISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTR 335
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
+TF+++LS A + + ++G+Q+H + G + FVGS L+ YA C +AK VFD
Sbjct: 336 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 395
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
E N ++W+ ML G+VQ L E+A+++
Sbjct: 396 SCEKNIVMWNAMLTGFVQNELP--------------------------------EEAIRM 423
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F++M +E+TF S++ AC L +F GK VH + IK + + A ++ Y
Sbjct: 424 FQYMMRYTLQT-DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYS 482
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-------------- 310
A A ++ + + N+L GL E+A + R+
Sbjct: 483 KYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFST 542
Query: 311 ----------TEAN------SISY---------NSMIKGYAVYGQVDDSKRLFEKMPHRS 345
TE +I Y +S+I Y+ +G V+ S+++F ++ S
Sbjct: 543 AINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASS 602
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
I+ + N++I+G+VQNN ++A+QL+ + K + + TFS +
Sbjct: 603 IVPI-----------------NALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSIL 645
Query: 406 HACSCLGSLQQ--GQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISS- 461
CS GSL G+ +H + +K+ + +G SL +Y + + DA + +
Sbjct: 646 SGCS--GSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 703
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
N+ WTA+++GY+ +G G +++ F M ++ + ATF VL AC +G +I
Sbjct: 704 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 763
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G + ++D+ + G + + E K++ + D + W +++
Sbjct: 764 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 815
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 193/392 (49%), Gaps = 23/392 (5%)
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
+ L+S +A+S + L FR++R + P+++ V+ AC+R+G G+ VH +
Sbjct: 136 SSLLSCHARSGSPGD-VLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDV 194
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
+K GF AL++ Y C A RV+D + P +S+I +G ++A
Sbjct: 195 VKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEAL 254
Query: 305 LIFNRLTEANS----ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
+F+R+ + S ++ ++I A G++D + L +KMP S
Sbjct: 255 ALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPST-------------- 300
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
V WN++ISG+ Q+ L L LY MR + TRSTF+ + A + + + +GQ +
Sbjct: 301 ---VAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQM 357
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA V ++NV+VG+SL+++Y++CG +DA+ F N+ W A++ G+ + L
Sbjct: 358 HAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELP 417
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
EA+ +F+ M+ + + TFV +L AC G ++ + +L
Sbjct: 418 EEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT 477
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+D+ + G + +A+ +P + D++ W AL
Sbjct: 478 LDMYSKYGAIGDAKALFSLIPYK-DSISWNAL 508
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/478 (21%), Positives = 205/478 (42%), Gaps = 66/478 (13%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G + A+ LF +P + +SWN + G ++ + +E++ ++ M + ++ +FST
Sbjct: 483 KYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFST 542
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
++ C+ + + GKQIHCL +K G VGS L+ Y+ ++E ++++F ++ +
Sbjct: 543 AINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASS 602
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ + ++ G+VQ N +A +F ++ K DG +
Sbjct: 603 IVPINALIAGFVQNNNEDEAIQLFQQVLK-----------------DGLK---------- 635
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES-IGGALIEFYCGCEA 268
P+ TF S++ C+ GK VH +K G +D++ +G +L Y +
Sbjct: 636 ------PSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKM 689
Query: 269 FDGAMRVYDRL-ENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIK 323
+ A ++ + ++ L ++I+G G + + + F R+ N ++ S++K
Sbjct: 690 LEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLK 749
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-------------------ERNPV 364
+ D K + + S T S + +M +++ +
Sbjct: 750 ACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIM 809
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
WNSMI G+ +N ++AL L+ M +L I TF + AC+ G + +G+ +
Sbjct: 810 PWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSM 869
Query: 425 VK----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
K TP + +D+ R G + +AQ + + P+ W + H
Sbjct: 870 RKVYGLTPRLDHY---ACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMH 924
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 22/161 (13%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+T+ I + G ++++ F ++ + ++ WN+M+ G++K DE+L L M
Sbjct: 777 TATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEE 836
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK--------SGYECF-EFVGSGLLFF 128
+K +E TF +L C + +G+ + K Y CF + +G G
Sbjct: 837 LQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRG---- 892
Query: 129 YANCFEIEEAKRVFDEL-HEDNELLWSLMLVGYVQCNLMSD 168
++EA+ D+L + ++W+ L C + D
Sbjct: 893 ----GHLQEAQEAIDQLPFRPDGVVWATYLAA---CRMHKD 926
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 186/566 (32%), Positives = 311/566 (54%), Gaps = 60/566 (10%)
Query: 129 YANCFEIEEAKRVFDELHEDNELL-WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKL 187
Y C I +A+R+FD + +++ W+ ML GYV+ + +A +F MP K+VV W +
Sbjct: 16 YIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERLFEVMPVKNVVSWNTM 75
Query: 188 ISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
I GY K+ + +KA+++F M E N ++++VI A L++C
Sbjct: 76 IDGYGKNRE-VDKAIEVFERMHER-----NMVSWNAVIAA----------------LVQC 113
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
G + A R +D + + + +++ GL GR+++A +F
Sbjct: 114 G-------------------RVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVF 154
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS------------- 354
+R+ E N +S+N+M+ GYA ++D++ LFE+MP R++ S NTMI+
Sbjct: 155 DRMPERNVVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARK 214
Query: 355 VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR-TRSTFSVLFHACSCLG 412
V EM E+N V+W +MI+GYVQ E AL++++ M K R TF + ACS +
Sbjct: 215 VFNEMPEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMA 274
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS--ISSPNVAAWTAL 470
L +GQ +H + K+ ++ +V ++L++MYS+CG ++ A+ F IS ++ W +
Sbjct: 275 GLGEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGM 334
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
+ Y+HHG G EA+ LFE M PN ++V +LSAC AGLV+EG+ F +
Sbjct: 335 IAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNS 394
Query: 531 VPTLE-HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ E H+ C+VDL GR+G L EA +FIK + + + +WG LL+ C ++E+G+ AA
Sbjct: 395 IQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAA 454
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+++ D + Y++LSNIYA KW + +R ++ +KK PGCSWIE+ +RVH F
Sbjct: 455 KELEKEDPENAGTYLLLSNIYASGRKWREASRVRLKMKEKGLKKQPGCSWIEVGNRVHVF 514
Query: 650 SVEDRNNPNCNVIYATLEHLTANLNS 675
D+++ N+IY+ + + A + +
Sbjct: 515 LARDKSHYQSNLIYSLVHDIHAEMKA 540
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 197/453 (43%), Gaps = 80/453 (17%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R ++ A LF+ MP++ VVSWNTM+ GY K + D+++ + MH N+ +++
Sbjct: 50 RLKRIEEAERLFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNM----VSWNA 105
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+++ Q + + ++ + K + + GL A ++EA++VFD + E N
Sbjct: 106 VIAALVQCGRVEEARRRFDEMPKRDVISWTTMVMGL----ARSGRVDEARKVFDRMPERN 161
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIK-------------------------------MPK 178
+ W+ M+ GY + + +AFD+F + MP+
Sbjct: 162 VVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPE 221
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
K+VV WT +I+GY + + E ALK+F M + G PNE TF +V+ AC+ + EG+
Sbjct: 222 KNVVSWTTMITGYVQEGE-SESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQ 280
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI--NGLIS 296
VH L+ K ++ + AL+ Y C A +++D + + L+ NG+I+
Sbjct: 281 QVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFD----DVVISQRDLVLWNGMIA 336
Query: 297 --------MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
M IE E + + N +SY ++ + G VD+ F+++ + I
Sbjct: 337 AYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQ 396
Query: 349 LNT-----MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
L ++ + R + Y +++L + S +
Sbjct: 397 LREDHHACLVDLCGRAGR--------------------LKEAYDFIKQLGTKASSSIWGG 436
Query: 404 LFHACSCLGSLQQGQLLHAHLVK-TPFESNVYV 435
L C+ G L+ GQL L K P + Y+
Sbjct: 437 LLAGCNAHGDLEIGQLAAKELEKEDPENAGTYL 469
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 123/540 (22%), Positives = 235/540 (43%), Gaps = 68/540 (12%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQM-PIRTVVSWNTMLCGYSKWAKFDESLSLV 72
E +V+ I+ + G +V AR LFD++ I+ VV+W ML GY + + +E+ L
Sbjct: 2 HERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERLF 61
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG-------SGL 125
M NV N++IDG + V K+ E FE + + +
Sbjct: 62 EVMPVKNV--------------VSWNTMIDGYGKNREVDKA-IEVFERMHERNMVSWNAV 106
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
+ C +EEA+R FDE+ + + + W+ M++G + + +A VF +MP+++VV W
Sbjct: 107 IAALVQCGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWN 166
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMP--NEYTFDSVIRACARLGAFC-------- 235
+++GYAK++ ++A LF E MP N +++++I + G
Sbjct: 167 AMVTGYAKNMR-LDEAFDLF-------ERMPERNLSSWNTMITGFIQNGELAWARKVFNE 218
Query: 236 --EGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
E VV + G+ + AL F + DG R + L A +
Sbjct: 219 MPEKNVVSWTTMITGYVQEGESESALKVFVEMIK--DGGARPNEGTFVNVLGACSD---- 272
Query: 294 LISMGRIEDAELIFNR-LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
+ +G + L+ ++ + + + ++++ Y+ G++ ++++F+ + +IS
Sbjct: 273 MAGLGEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDV----VIS---- 324
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
+R+ V WN MI+ Y + +A++L+ M+ L ++ L ACS G
Sbjct: 325 -------QRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAG 377
Query: 413 SLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA-WTAL 470
+ +G L + + LVD+ R G + +A + + ++ W L
Sbjct: 378 LVDEGLNYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGL 437
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
+ G + HG E L LE++ NA T++ + + E ++ MK G+
Sbjct: 438 LAGCNAHG-DLEIGQLAAKELEKEDPENAGTYLLLSNIYASGRKWREASRVRLKMKEKGL 496
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 212/711 (29%), Positives = 354/711 (49%), Gaps = 109/711 (15%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQM-PIRTVVSWNTML-CGYSKWAKFDESLSLVSTMH 76
V+ N I+ + GQ A ++F M R ++SW+ M+ C + F L+ V M
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVD-MI 160
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEI 135
+ NE F+ C+ + G I V+K+GY + VG GL+ +
Sbjct: 161 ENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKG--- 217
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS-----G 190
+ +L+S AF VF KMP+++ V WT +I+ G
Sbjct: 218 --------------------------RGDLVS-AFKVFEKMPERNAVTWTLMITRLMQFG 250
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
YA +A+ LF M SG P+ +T VI ACA + G+ +H I+ G
Sbjct: 251 YAG------EAIDLFLEMILSGYE-PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLT 303
Query: 251 FDESIGGALIEFYCGCEAFDGAM----RVYDRLENPCLNASNSLINGLISMGRIEDAEL- 305
D +G LI Y C + DG+M +++D++ + + + ++I G + G ++ L
Sbjct: 304 LDRCVGCCLINMYAKC-SVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALD 362
Query: 306 ----------IFNRLTEANSISY-----------------------------NSMIKGYA 326
I N T ++++ NS+I YA
Sbjct: 363 LFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYA 422
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G++DD+++ F+ + E+N +++N++I Y +N E+AL+L+
Sbjct: 423 RSGRIDDARKAFDIL-----------------FEKNLISYNTVIDAYAKNLNSEEALELF 465
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
+ + + TF+ L + +G++ +G+ +HA ++K+ + N V +L+ MYSRC
Sbjct: 466 NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRC 525
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G+I A F + NV +WT+++ G++ HG ++A+ LF MLE+ + PN T++ VL
Sbjct: 526 GNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVL 585
Query: 507 SACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
SAC GLVNEG K F+SM + +GV+P +EHY C+VD+LGRSG L EA +FI MP + D
Sbjct: 586 SACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKAD 645
Query: 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKR 625
A+VW L AC N+E+G+ AA+ + + +AY++LSN+YA KW + +IRK
Sbjct: 646 ALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKA 705
Query: 626 LTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ + K+ GCSW+E+ ++VH F V D ++P IY L++L+ + +
Sbjct: 706 MKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKL 756
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 123/541 (22%), Positives = 234/541 (43%), Gaps = 61/541 (11%)
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
+ +++S + M + T+S L C + S G +H + +S +
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ L+ Y+ C + E+A +F LM + +D++
Sbjct: 105 NSLISLYSKCGQWEKATSIF---------------------QLMGSS---------RDLI 134
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W+ ++S +A + G +AL F M E+G PNEY F + RAC+ G + G
Sbjct: 135 SWSAMVSCFANNNMGF-RALLTFVDMIENGY-YPNEYCFAAATRACSTAEFVSVGDSIFG 192
Query: 243 LLIKCGF-EFDESIGGALIE-FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
++K G+ + D +G LI+ F G A +V++++ +I L+ G
Sbjct: 193 FVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYA 252
Query: 301 EDAELIF----------NRLTEANSISYNS----MIKGYAVYGQVDDSKRLFEKMPHRSI 346
+A +F +R T + IS + ++ G ++ Q ++ +
Sbjct: 253 GEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCL 312
Query: 347 ISLNTMISVIPEM-----------ERNPVTWNSMISGYVQNNLH-EKALQLYMTMRKLAI 394
I++ SV M + N +W +MI+GYVQ + E+AL L+ M +
Sbjct: 313 INMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHV 372
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
TFS AC+ L +L+ G+ + H VK F S V SL+ MY+R G I+DA+
Sbjct: 373 IPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARK 432
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
+F + N+ ++ +++ Y+ + EA+ LF + +Q + +A TF +LS G
Sbjct: 433 AFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT 492
Query: 515 VNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+ +G +I + G+ ++ + R G++ A + +DM + + + W ++++
Sbjct: 493 IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIIT 551
Query: 575 A 575
Sbjct: 552 G 552
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 8/217 (3%)
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
NP+T +I LH KA+ M T+S+ C S G L+H
Sbjct: 32 NPLT-GRLIQEINNGRLH-KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVH 89
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGYSHHGLG 480
L ++ + + SL+ +YS+CG A + F + SS ++ +W+A+++ ++++ +G
Sbjct: 90 EKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMG 149
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC- 539
A+L F M+E PN F AC A V+ G IF + G + + C
Sbjct: 150 FRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCG 209
Query: 540 VVDLL--GRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
++D+ GR G L A + + MP E +AV W +++
Sbjct: 210 LIDMFVKGR-GDLVSAFKVFEKMP-ERNAVTWTLMIT 244
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 194/612 (31%), Positives = 305/612 (49%), Gaps = 88/612 (14%)
Query: 45 PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
P V WN+++ + F E+LSL S R ++ + TF ++++ CA L K
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 105 QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
IH VL G+ ++G+ L+ Y ++++A++VF+E
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEE-------------------- 175
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYA------KSVDGCEKALKLFRWMRESGENMPNE 218
MP +DVV W LISGY ++++ +++KLF M + P+
Sbjct: 176 -----------MPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLF--MEMVNQFKPDL 222
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
T S+++AC LG GK VH +I G+E D + LI Y C
Sbjct: 223 LTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKC------------ 270
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLF 338
G + ++ +F+ + +S+S+NSMI Y G++ DS ++F
Sbjct: 271 -------------------GNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVF 311
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
E M R II TWN++I+ V + L++ MR +
Sbjct: 312 ENMKARDII-----------------TWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDM 354
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
+T + CS L + +QG+ +H + K ES+V VG L++MYS+CGS+ ++ F
Sbjct: 355 ATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKL 414
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ + +V WTAL++ +G G +AV F M IVP+ FV ++ AC +GLV EG
Sbjct: 415 MKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEG 474
Query: 519 MKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
+ F MK Y + P +EHY CVVDLL RS L +AE+FI MP++ D+ +WGALLSAC
Sbjct: 475 LNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACR 534
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
+ E+ ER ++++ L+ YV++SNIYA LGKW + IRK + +KKDPGC
Sbjct: 535 MSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGC 594
Query: 638 SWIELNSRVHAF 649
SW+E+ ++V+ F
Sbjct: 595 SWMEIQNKVYVF 606
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 214/475 (45%), Gaps = 35/475 (7%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR------SNVKLN 83
R L AR +F++MP+R VVSWN+++ GY+ ++E+L + + + K +
Sbjct: 162 RFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPD 221
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
T ++IL C L L GK +H ++ SGYEC + L+ YA C + ++ VF
Sbjct: 222 LLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFS 281
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ + + W+ M+ Y+Q M D+ VF M +D++ W +I+ S D C L+
Sbjct: 282 GMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSED-CNLGLR 340
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
+ MR G P+ T S++ C+ L A +GK +HG + K G E D +G LIE Y
Sbjct: 341 MISRMRTEGVT-PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMY 399
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYN 319
C + + +V+ ++ + +LI+ G + A F + A + +++
Sbjct: 400 SKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFV 459
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
++I + G V++ F +M I P +E + ++ ++ L
Sbjct: 460 AIIFACSHSGLVEEGLNYFHRMKKDYKIE--------PRIEH----YACVVDLLSRSALL 507
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTS 438
+KA ++M + S + L AC G + + + +++ P ++ YV S
Sbjct: 508 DKAEDFILSM---PLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVS 564
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVA-----AWTALMNGYSHHGLGSEAVLLFE 488
++Y+ G + ++ SI + + +W + N G G++ FE
Sbjct: 565 --NIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFE 617
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 124/263 (47%), Gaps = 9/263 (3%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
+S+I ++ V S +L K H + + + + N WNS+I N L
Sbjct: 36 HSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGL 95
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+AL LY +++ + TF + +AC+ L + + +H ++ F S++Y+G +
Sbjct: 96 FSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNA 155
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA-------VLLFEIML 491
L+DMY R ++ A+ F + +V +W +L++GY+ +G +EA + LF M+
Sbjct: 156 LIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMV 215
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
Q P+ T +L AC G + G + M + G ++++ + G+L
Sbjct: 216 NQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLL 274
Query: 552 EAEEFIKDMPIELDAVVWGALLS 574
++E M + D+V W ++++
Sbjct: 275 ASQEVFSGMKCK-DSVSWNSMIN 296
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 105/244 (43%), Gaps = 40/244 (16%)
Query: 1 MKLYATQSQTLMTQETLI-------VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWN 53
+ +YA L +QE VS N I +NG++ + +F+ M R +++WN
Sbjct: 264 INMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWN 323
Query: 54 TMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS 113
T++ + L ++S M V + T +IL VC+ L + GK+IH + K
Sbjct: 324 TIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL 383
Query: 114 GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
G E VG+ L+ Y+ C + ++F VF
Sbjct: 384 GLESDVPVGNVLIEMYSKCGSLR-------------------------------NSFQVF 412
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
M KDVV WT LIS +G +KA++ F M +G +P+ F ++I AC+ G
Sbjct: 413 KLMKTKDVVTWTALISACGMYGEG-KKAVRAFGEMEAAG-IVPDHVAFVAIIFACSHSGL 470
Query: 234 FCEG 237
EG
Sbjct: 471 VEEG 474
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 199/628 (31%), Positives = 306/628 (48%), Gaps = 83/628 (13%)
Query: 51 SWNTMLCGYSKWAKFDESLSLVS-TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCL 109
SWN + G+ E++ L + K + T+ + CA+L+ + G +I
Sbjct: 73 SWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 132
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
VL G++ FV + ++ +C +++ A+++FD
Sbjct: 133 VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFD-------------------------- 166
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
K +D+V W +I+GY + E AL +R M+ G P+E T V+ +CA
Sbjct: 167 -----KSCVRDLVSWNSMINGYVRRGWAYE-ALNFYREMKVEGIK-PDEVTMIGVVSSCA 219
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
+L G+ H + + G + + AL++ Y C
Sbjct: 220 QLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKC----------------------- 256
Query: 290 LINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
G +E A +F+ +T +S+ +M+ GYA G +D + +LF++MP + +
Sbjct: 257 --------GNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDV--- 305
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
V WN+MI GYV N ++AL L+ M+ + I+ T ACS
Sbjct: 306 --------------VPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACS 351
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
LG+L G +H ++ K NV +GT+L+DMY++CG I A F + N WTA
Sbjct: 352 QLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTA 411
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-Y 528
+++G + HG A+ F M++ ++P+ TF+G+LSAC GLV EG K F M S +
Sbjct: 412 IISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKF 471
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
+ P L+HY+C+VDLLGR+G L EAEE IK MPIE DAVVWGAL AC N+ +GERA
Sbjct: 472 NLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERA 531
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A K+ +D YV+L+N+Y W + RK + V+K PGCS IE+N V+
Sbjct: 532 ASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYE 591
Query: 649 FSVEDRNNPNCNVIYATLEHLTANLNSV 676
F V D+++P IY L LT L V
Sbjct: 592 FIVRDKSHPQSEQIYECLIQLTRQLELV 619
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 210/417 (50%), Gaps = 24/417 (5%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+ +R +VSWN+M+ GY + E+L+ M +K +E T ++
Sbjct: 156 GDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVV 215
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S CAQL L G++ HC + ++G + + + L+ Y C +E A+++FD + +
Sbjct: 216 SSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMV 275
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+VGY Q L+ A+ +F +MP KDVV W +I GY + G ++AL LF M+
Sbjct: 276 SWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRG-KEALALFNEMQAM 334
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
N P+E T S + AC++LGA G +H + K + ++G ALI+ Y C
Sbjct: 335 NIN-PDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITK 393
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAV 327
A++V+ L ++I+GL G A F+ + + + +++ ++
Sbjct: 394 AIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCH 453
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V++ ++ F +M + +S P+++ ++ M+ + L E+A +L
Sbjct: 454 GGLVEEGRKYFSQMSSKFNLS--------PKLKH----YSCMVDLLGRAGLLEEAEEL-- 499
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMY 443
++ + I+ + LF AC G++ G+ + L++ P +S +YV L +MY
Sbjct: 500 -IKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYV--LLANMY 553
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 105/205 (51%), Gaps = 7/205 (3%)
Query: 361 RNPVT--WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACSCLGSLQ 415
RNP T WN I G++ + +A+ LY R L D T+ T+ +LF AC+ L ++
Sbjct: 67 RNPNTFSWNVAIRGFLDSENPREAVVLYK--RVLQCDGTKPDNYTYPLLFKACARLSLIR 124
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G + H++ F+S+++V +++ + CG ++ A+ F ++ +W +++NGY
Sbjct: 125 MGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYV 184
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
G EA+ + M + I P+ T +GV+S+C + ++ G + ++ G+ T+
Sbjct: 185 RRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVP 244
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDM 560
++D+ + G+L A + M
Sbjct: 245 LANALMDMYMKCGNLESARKLFDSM 269
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 34/227 (14%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
MT +T+ VS + ++G L A LFD+MP + VV WN M+ GY + E+L+L
Sbjct: 269 MTNKTM-VSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALAL 327
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ M N+ +E T + LS C+QL +L G IH + K +G+ L+ YA
Sbjct: 328 FNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAK 387
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C +I +A +VF EL P ++ + WT +ISG
Sbjct: 388 CGKITKAIQVFQEL-------------------------------PGRNSLTWTAIISGL 416
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
A + A+ F M ++ MP+E TF ++ AC G EG+
Sbjct: 417 ALHGNA-HGAIAYFSEMIDNSV-MPDEVTFLGLLSACCHGGLVEEGR 461
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 192/611 (31%), Positives = 294/611 (48%), Gaps = 94/611 (15%)
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
+ +H L + SG+ FV S L Y +A++VFD
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFD-------------------- 182
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+P D V+W L++G + S +AL+ F M +G P+ T S
Sbjct: 183 -----------AVPSPDTVLWNTLLAGLSGS-----EALEAFVRMAGAGSVRPDSTTLAS 226
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
V+ A A + G+ VH KCG E + LI Y C + A ++DR+E P
Sbjct: 227 VLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPD 286
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLT-------------------------------- 311
L N+LI+G G + + +F L
Sbjct: 287 LVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHA 346
Query: 312 -------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV 364
+AN+ ++ Y + +D ++R F+ MP +++ S
Sbjct: 347 HVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMES---------------- 390
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
WN+MISGY QN L E A+ L+ M+ L + T S AC+ LG+L G+ +H +
Sbjct: 391 -WNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKII 449
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
E NVYV T+L+DMY +CGSI +A+ F S+ + NV +W +++GY HG G+EA+
Sbjct: 450 ANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEAL 509
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDL 543
L++ M++ + P ++TF+ VL AC GLV EG +FRSM S YG+ P +EH TC+VDL
Sbjct: 510 KLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDL 569
Query: 544 LGRSGHLHEAEEFIKDMPIE-LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISA 602
LGR+G L EA E I + P + +WGALL AC + ++ + A+QK+F L+ +
Sbjct: 570 LGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGY 629
Query: 603 YVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
YV+LSN+Y ++ + +R+ ++ K PGC+ IE+ R H F DR +P + I
Sbjct: 630 YVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAI 689
Query: 663 YATLEHLTANL 673
Y LE LTA +
Sbjct: 690 YLYLEKLTAKM 700
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 120/489 (24%), Positives = 204/489 (41%), Gaps = 73/489 (14%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR +FD +P V WNT+L G S + + V +V+ + TT +++L A+
Sbjct: 177 ARKVFDAVPSPDTVLWNTLLAGLSGSEALE---AFVRMAGAGSVRPDSTTLASVLPAAAE 233
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ + G+ +H K G E V +GL+ YA C ++E A+ +FD
Sbjct: 234 VANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFD------------- 280
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENM 215
+M D+V + LISGY S++G +++LF+ + G
Sbjct: 281 ------------------RMEGPDLVTYNALISGY--SINGMVGSSVELFKELVGMGLR- 319
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ T ++I + G +H ++K G + + + AL YC D A R
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRA 379
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQV 331
+D + + + N++I+G G E A +F ++ N ++ +S + A G +
Sbjct: 380 FDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGAL 439
Query: 332 DDSKRLFEKMPHR----------SIISLNTMISVIPEME--------RNPVTWNSMISGY 373
K + + + + ++I + I E +N V+WN MISGY
Sbjct: 440 SLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGY 499
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK----TPF 429
+ +AL+LY M + T STF + +ACS G +++G + + TP
Sbjct: 500 GLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITP- 558
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA--WTALMNGYSHHGLGSEAVL-- 485
+ T +VD+ R G + +A S V W AL+ H G A L
Sbjct: 559 --GIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLAS 616
Query: 486 --LFEIMLE 492
LFE+ E
Sbjct: 617 QKLFELEPE 625
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 125/310 (40%), Gaps = 64/310 (20%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR+LFD+M +V++N ++ GYS S+ L + ++ + +T ++
Sbjct: 270 GDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALI 329
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
V + +H V+K+G + V + L Y +++ A+R FD + E
Sbjct: 330 PVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTME 389
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY Q L A +F +M +V
Sbjct: 390 SWNAMISGYAQNGLTEMAVALFQQMQALNV------------------------------ 419
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
PN T S + ACA+LGA GK VH ++ E + + ALI+ Y C
Sbjct: 420 ---RPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKC----- 471
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
G I +A IF+ + N +S+N MI GY ++GQ
Sbjct: 472 --------------------------GSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQG 505
Query: 332 DDSKRLFEKM 341
++ +L++ M
Sbjct: 506 AEALKLYKDM 515
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VST C R + +AR FD MP +T+ SWN M+ GY++ + +++L M
Sbjct: 359 VSTALTTLYC-RFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQAL 417
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
NV+ N T S+ LS CAQL +L GK +H ++ E +V + L+ Y C I EA
Sbjct: 418 NVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEA 477
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +FD + N + W++M ISGY G
Sbjct: 478 RCIFDSMDNKNVVSWNVM-------------------------------ISGYGLHGQGA 506
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
E ALKL++ M ++ + P TF SV+ AC+ G EG V
Sbjct: 507 E-ALKLYKDMMDAHLH-PTSSTFLSVLYACSHGGLVKEGTTV 546
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 26/248 (10%)
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL------------L 420
+++N+L L+ T+R + + +FS F A S S +G + L
Sbjct: 90 FLRNSL----LRSLPTLRADLLFPSPDSFSFAFAATSLASSCSRGGISPPSAASAALRPL 145
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA V + F ++ +V ++L +Y NDA+ F ++ SP+ W L+ G S G
Sbjct: 146 HALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLS----G 201
Query: 481 SEAVLLFEIMLEQDIV-PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
SEA+ F M V P++ T VL A G + + G+ T
Sbjct: 202 SEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTG 261
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA--QKMFGLDK 597
++ L + G + A M D V + AL+S + +N VG +++ G+
Sbjct: 262 LISLYAKCGDMECARHLFDRMEGP-DLVTYNALISG--YSINGMVGSSVELFKELVGMGL 318
Query: 598 KPISAYVI 605
+P S+ ++
Sbjct: 319 RPSSSTLV 326
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/559 (33%), Positives = 301/559 (53%), Gaps = 24/559 (4%)
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
F+ + LL YA EI A+++FDE+ + + W+ ML Y + L+ D +F MP +
Sbjct: 59 FIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSR 118
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
D V + +ISG+A + G AL +F M++ G P EYT SV+ AC +L GK
Sbjct: 119 DSVSYNTVISGFAGNGRG-GPALGVFLRMQKEGLK-PTEYTHVSVLNACTQLLDLRRGKQ 176
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
+HG +I C + + AL + Y C D A R++DR+ + N +I+G + +
Sbjct: 177 IHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQ 236
Query: 300 IEDAELIFNRLTEAN----SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
E +F+ + +N ++ +S++ Y G +D+++++F ++
Sbjct: 237 PEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEI-------------- 282
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
E++ V W MI G QN E AL L+ M T S + +C+ L SL
Sbjct: 283 ---REKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLY 339
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
GQ++H ++ V ++LVDMY +CG DA FS++ + NV +W +++ GY+
Sbjct: 340 HGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYA 399
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTL 534
+G EA+ L+E MLE+++ P++ TFVGVLSACV AGLV EG + F SM +G+ PT
Sbjct: 400 LNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTP 459
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
+HY C+V+L GRSGH+ +A + I M E ++++W +LS C +++ GE AA+ +
Sbjct: 460 DHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIE 519
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
L+ Y++LSN+YA G+W IR + VKK SWIE+++ VH F +DR
Sbjct: 520 LNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDR 579
Query: 655 NNPNCNVIYATLEHLTANL 673
+P+ +I+ L L L
Sbjct: 580 THPDAKIIHVQLNRLIRKL 598
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 129/509 (25%), Positives = 220/509 (43%), Gaps = 97/509 (19%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N ++ ++G + R +FD MP R VS+NT++ G++ + +L + M +
Sbjct: 91 SWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEG 150
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+K E T ++L+ C QL L GKQIH ++ FV + L YA C EI++A+
Sbjct: 151 LKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQAR 210
Query: 140 RVFDELHEDNELLWSLMLVG-----------------------------------YVQCN 164
R+FD + N + W+LM+ G Y+Q
Sbjct: 211 RLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAG 270
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
+ +A VF ++ +KD V WT +I G A++ E AL LF M P+ YT SV
Sbjct: 271 YIDEARKVFGEIREKDEVCWTIMIVGCAQNGKE-EDALLLFSEMLLENAR-PDGYTISSV 328
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+ +CA+L + G+VVHG G D + AL++ YC C
Sbjct: 329 VSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKC------------------ 370
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
G DA IF+ + N +S+NSMI GYA+ GQ ++ L+E M
Sbjct: 371 -------------GVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEE 417
Query: 345 S----------IISLNTMISVIPE-------------MERNPVTWNSMISGYVQNNLHEK 381
+ ++S ++ E +E P + M++ + ++ +K
Sbjct: 418 NLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDK 477
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLV 440
A+ L +M + + ++ + C G ++ G++ L++ PF + Y+ L
Sbjct: 478 AVDLISSMSQ---EPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYI--MLS 532
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTA 469
+MY+ G D + S + S +V ++A
Sbjct: 533 NMYAARGRWKDVASIRSLMKSKHVKKFSA 561
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+ L+VS+ C + G A +F M R VVSWN+M+ GY+ + E+LSL
Sbjct: 355 DDLLVSSALVDMYC-KCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYEN 413
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHC-LVLKSGYECFEFVGSGLLFFYANCF 133
M N+K + TF +LS C + +GK+ C + + G E + ++ +
Sbjct: 414 MLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSG 473
Query: 134 EIEEAKRVFDEL-HEDNELLWSLML 157
+++A + + E N L+W+ +L
Sbjct: 474 HMDKAVDLISSMSQEPNSLIWTTVL 498
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 189/632 (29%), Positives = 327/632 (51%), Gaps = 55/632 (8%)
Query: 43 QMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLID 102
Q P T + L S + E+LS + + + V+L F +L +CA+
Sbjct: 21 QRPDSTSLCIAQSLLDLSSQGRLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKG 80
Query: 103 GKQIHCLVLKSGYE-CFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYV 161
GK +H + +G++ V + L+ Y C EA++VFD++ N W+ ML GY
Sbjct: 81 GKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYA 140
Query: 162 QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYT 220
+ +++A +F +M +KDVV W ++ YAK GC +A+ L+R R N ++
Sbjct: 141 KLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQ--GCFNEAIGLYRDFRRLDMGF-NAFS 197
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
F V+ C +L K VHG ++ GF + + ++++ Y C G MR
Sbjct: 198 FAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKC----GEMRC----- 248
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
A +F+ + + ++ +++ GYA +G ++ + LF +
Sbjct: 249 ----------------------ARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQ 286
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
MP E+NPV+W+++ISGY +N+L +AL + M K I+ + T
Sbjct: 287 MP-----------------EKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYT 329
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
FS AC+ + +L+ G+ +H +L++T F N V +SL+DMYS+CG + + F +
Sbjct: 330 FSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMG 389
Query: 461 SP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+ +V W +++ + +G G +A+ +F M+E + P+ TF+ +LSAC +GLV EG+
Sbjct: 390 NKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGL 449
Query: 520 KIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
+ F++M +GV P EHY+C++DLLGR+G E +++M + D VW ALL C
Sbjct: 450 RFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRI 509
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
N+E+G + A+++ L + +AYV L+++YA LGKW +R+ + ++K+ G S
Sbjct: 510 HNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGIS 569
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
WI++ ++ H+F DR +P IY LE L
Sbjct: 570 WIDVGNKTHSFIASDRLHPLKEEIYLLLEQLA 601
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 177/331 (53%), Gaps = 7/331 (2%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N + + G + AR LFD+M + VVSWNT++ Y+K F+E++ L R
Sbjct: 129 LYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRR 188
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ N +F+ +L +C +L L KQ+H VL +G+ + S ++ YA C E+
Sbjct: 189 LDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRC 248
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ +FDE+ + W+ ++ GY + M+ A ++F +MP+K+ V W+ LISGYA++ G
Sbjct: 249 ARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLG 308
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E AL F M + G N P +YTF S + ACA + A GK VHG LI+ F + +
Sbjct: 309 HE-ALDYFTKMMKFGIN-PEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVS 366
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPC-LNASNSLINGLISMGRIEDAELIFNRLTEA--- 313
+LI+ Y C + + V+ + N + N++I+ L G E A +FN + E+
Sbjct: 367 SLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLK 426
Query: 314 -NSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+ I++ ++ + G V + R F+ M +
Sbjct: 427 PDRITFIVILSACSHSGLVQEGLRFFKAMTY 457
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 304/580 (52%), Gaps = 81/580 (13%)
Query: 99 SLIDGKQIHCLVLKSGYECFEFVGSGLLFF-YANCFEIEEAKRVFDELHEDNELLWSLML 157
S+ D ++IH ++K+G S +L F + +I A VF ++ N +W+ ++
Sbjct: 8 SMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVWNTII 67
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
G+ Q + +A +FI M M S P
Sbjct: 68 RGFSQSSTPHNAISLFIDM-------------------------------MFTSPTTQPQ 96
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
T+ SV +A A+LG EG +HG +IK G E D+ I ++ Y C
Sbjct: 97 RLTYPSVFKAYAQLGLAHEGAQLHGRVIKLGLENDQFIQNTILNMYVNC----------- 145
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRL 337
G + +A+ IF+ T + +++N+MI G A G++D S+RL
Sbjct: 146 --------------------GFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRRL 185
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
F+KM + RN V+WNSMISGYV+ +A++L+ M++ I +
Sbjct: 186 FDKM-----------------LLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPS 228
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
T L +AC+CLG+L+QG+ +H ++VK F N V T+++DMYS+CGSI+ A F
Sbjct: 229 EFTMVSLLNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFK 288
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
S ++ W +L+ G + G G+EAV LF + ++ P+ +F+GVL+AC AG+V+
Sbjct: 289 SAPKKGLSCWNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDR 348
Query: 518 GMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
F M ++Y + P+++HY+C+VD+LGR+G L EAEE IK MP+ DA++WG+LLS+C
Sbjct: 349 AKDYFLLMSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSC 408
Query: 577 WFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPG 636
+ N+E+ ++AA+++ LD S++++LSN+YA + + ++ R L ++ K+PG
Sbjct: 409 REYGNIEMAKQAAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPG 468
Query: 637 CSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
CS IE+N VH F R +P IY L+ L L +
Sbjct: 469 CSLIEVNGEVHEFVAGGRLHPRSKDIYHALDDLGLTLKEM 508
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 195/397 (49%), Gaps = 31/397 (7%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
K++A +T + ++T ++ ++ + C G + A +F Q+ + WNT++ G+S
Sbjct: 14 KIHAQLIKTGLAKDT--IAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVWNTIIRGFS 71
Query: 61 KWAKFDESLSLVSTM--HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF 118
+ + ++SL M + T+ ++ AQL +G Q+H V+K G E
Sbjct: 72 QSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRVIKLGLEND 131
Query: 119 EFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK 178
+F+ + +L Y NC + EA+R+FD + + W+ M++G +C + + +F KM
Sbjct: 132 QFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRRLFDKMLL 191
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
++ V W +ISGY + E A++LF M+E G P+E+T S++ ACA LGA +G+
Sbjct: 192 RNTVSWNSMISGYVRKGRFFE-AMELFSRMQEEGIK-PSEFTMVSLLNACACLGALRQGE 249
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+H ++K F + + A+I+ Y C + D A++V+ L+ NSLI GL G
Sbjct: 250 WIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLAMSG 309
Query: 299 RIEDAELIFNRLTEAN----SISYNSMIKGYAVYGQVDDSKRLFEKMPHR-----SIISL 349
R +A +F++L +N +S+ ++ G VD +K F M SI
Sbjct: 310 RGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIEPSIKHY 369
Query: 350 NTMISV-------------IPEMERNP--VTWNSMIS 371
+ M+ V I M NP + W S++S
Sbjct: 370 SCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLS 406
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 212/665 (31%), Positives = 340/665 (51%), Gaps = 65/665 (9%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
LFD+MP R VSWNTM+ GY+ K + S L + M R ++ +FS +L A
Sbjct: 3 LFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKR 62
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
G+Q+H LV+K GYEC +VGS L+ YA
Sbjct: 63 FDLGEQVHGLVVKGGYECNVYVGSSLVDMYA----------------------------- 93
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
+C + DAF F+++ + + V W LI+G+ + D + A L M ++
Sbjct: 94 --KCERVEDAFGAFMEILEPNSVSWNALIAGFVQVRD-TKTAFWLLGLMEMKAAVTMDDG 150
Query: 220 TFDSVIRACARLGAFCE-GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
TF ++ FC K VH ++K G E + +I A+I Y C A RV+D
Sbjct: 151 TFAPLLTLLDD-PMFCNLLKQVHAKVLKLGLEHEITICNAMISSYANCGLVSDAKRVFDG 209
Query: 279 L-ENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK---------- 323
L + L + NS+I GL + E A +F + E + +Y ++
Sbjct: 210 LGGSKDLISWNSMIAGLSKHEQKESAFELFTEMHRNWIETDIYTYTGIVSACSGEEHQSF 269
Query: 324 GYAVYGQVDDSKRLFEKMPHRS--IIS---------LNTMISVIPEME-RNPVTWNSMIS 371
G +++G V K+ E++ S +IS + +S+ ++ ++ V+WNS+++
Sbjct: 270 GKSLHGLV--IKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMT 327
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
G+ QN L E A++ + +R I+ FS + +CS L +LQ GQ HA K+ FES
Sbjct: 328 GFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFES 387
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIM 490
N +V +SL+ MYS+CG I +A+ F ISS N AW A++ GY+ HG G ++ LF M
Sbjct: 388 NEFVTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQM 447
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGH 549
Q++ + TF +L+AC GL+ EG+++ SM+ Y + P +EHY VDLLGR+G
Sbjct: 448 CNQNVKLDHVTFTAILTACSHTGLIQEGLELLNSMEPVYKIQPRMEHYAAAVDLLGRAGL 507
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
+++ +E I+ MP+ D +V L C +E+ + A + ++ + AYV LS++
Sbjct: 508 VNKVKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFAYVSLSHM 567
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
Y+ L KW +K +++K + VKK PG SWIE+ ++V+AF+ EDR++ IY +E L
Sbjct: 568 YSDLKKWEEKANVKKMMKERGVKKVPGWSWIEIRNQVNAFNAEDRSHSLSKEIYLMIEDL 627
Query: 670 TANLN 674
T +
Sbjct: 628 TQEMQ 632
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 169/380 (44%), Gaps = 77/380 (20%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVS 73
E I N I+ G + A+ +FD + + ++SWN+M+ G SK + + + L +
Sbjct: 181 EHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFT 240
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
MHR+ ++ + T++ I+S C+ GK +H LV+K G E V + L+ Y
Sbjct: 241 EMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQ-- 298
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+M DA +F + KD+V W +++G+++
Sbjct: 299 ---------------------------FPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQ 331
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ E A+K FR++R S + ++Y F +V+R+C+ L G+ H L K FE +E
Sbjct: 332 N-GLSEDAVKFFRYLRSSNIEV-DDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNE 389
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-TE 312
+ +LI Y C G IE+A F ++ ++
Sbjct: 390 FVTSSLILMYSKC-------------------------------GVIENARKCFEQISSK 418
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
N+I++N+MI GYA +G S LF +M ++++ + + VT+ ++++
Sbjct: 419 HNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNV-------------KLDHVTFTAILTA 465
Query: 373 YVQNNLHEKALQLYMTMRKL 392
L ++ L+L +M +
Sbjct: 466 CSHTGLIQEGLELLNSMEPV 485
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 18/173 (10%)
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
RLF++MP +R+ V+WN+MISGY E + L+ M++
Sbjct: 2 RLFDEMP-----------------QRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCY 44
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
+FS L + G+ +H +VK +E NVYVG+SLVDMY++C + DA +
Sbjct: 45 VDGYSFSRLLKGIASAKRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGA 104
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM-LEQDIVPNAATFVGVLS 507
F I PN +W AL+ G+ A L +M ++ + + TF +L+
Sbjct: 105 FMEILEPNSVSWNALIAGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLT 157
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 162/379 (42%), Gaps = 68/379 (17%)
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVY 328
MR++D + + N++I+G S G++E++ +F + + S++ ++KG A
Sbjct: 1 MRLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASA 60
Query: 329 GQVDDSKR---LFEKMPHRSIISL-NTMISVIPEMER--------------NPVTWNSMI 370
+ D ++ L K + + + ++++ + + ER N V+WN++I
Sbjct: 61 KRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALI 120
Query: 371 SGYVQNNLHEKALQLYMTMR-KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+G+VQ + A L M K A+ TF+ L + +HA ++K
Sbjct: 121 AGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL 180
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
E + + +++ Y+ CG ++DA+ F + S ++ +W +++ G S H A LF
Sbjct: 181 EHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFT 240
Query: 489 IMLEQDIVPNAATFVGVLSAC-------------------------------------VR 511
M I + T+ G++SAC
Sbjct: 241 EMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFP 300
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF---IKDMPIELDAVV 568
G++ + + +F S+K +V + ++ ++G +A +F ++ IE+D
Sbjct: 301 TGVMKDALSLFESLKPKDLVS----WNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYA 356
Query: 569 WGALLSACWFWMNMEVGER 587
+ A+L +C +++G++
Sbjct: 357 FSAVLRSCSDLATLQLGQQ 375
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 194/662 (29%), Positives = 341/662 (51%), Gaps = 61/662 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A+N+FD + +V WN ML G+ + +E++ + M R ++ +E TF +IL C
Sbjct: 379 AKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTY 438
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L+S GKQ+HC+ +K+ + FV + L Y+ I +AK +F +
Sbjct: 439 LSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI----------- 487
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
P KD + W L G A++++ E+A+ + + MR G P
Sbjct: 488 --------------------PYKDSISWNALTVGLAQNLEE-EEAVCMLKRMRLHGIT-P 525
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
++ +F + I AC+ + A GK +H L IK G + ++G +LI+ Y + + +++
Sbjct: 526 DDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 585
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKG------YA 326
+++ + N+LI G + ++A +F ++ + +S++++S++ G A
Sbjct: 586 AQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSA 645
Query: 327 VYGQVD----DSKRLFEK-----------MPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
+ QV S L++ + + + N +++ +P+ +N W ++IS
Sbjct: 646 IGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD-HKNLFEWTAIIS 704
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
GY QN + +L + MR + +TF+ + ACS + + G+ +H + K+ F S
Sbjct: 705 GYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGS 764
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIM 490
++L+DMYS+CG + + +F + + ++ W +++ G++ +G EA+LLF+ M
Sbjct: 765 YETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKM 824
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGH 549
E I P+ TF+GVL AC +GL++EG F M K YG+ P L+HY C +DLLGR GH
Sbjct: 825 EELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGH 884
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
L EA+E I +P D VVW L+AC + E G+ AA+K+ L+ + S YV+LS++
Sbjct: 885 LQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSL 944
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+A G W + R+ + V K PGCSWI + ++ F V+D+ +P+ IY L L
Sbjct: 945 HAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDL 1004
Query: 670 TA 671
T
Sbjct: 1005 TG 1006
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 140/575 (24%), Positives = 250/575 (43%), Gaps = 104/575 (18%)
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ ++ + +LS C+++ L G+Q+HC V+KSG+ F + L+ YA C ++ A+R
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI-------------------------- 174
VFD + + + WS M+ Y + +A +F
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 274
Query: 175 ---------KMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSV 224
KMP V W +ISG+A+S G E L L++ MR G P TF S+
Sbjct: 275 LDHATALLKKMPTPSTVAWNAVISGHAQS--GLEFNVLGLYKDMRSWGL-WPTRSTFASM 331
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+ A A + AF EG+ +H + G + + +G +LI Y C A V+D +
Sbjct: 332 LSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNI 391
Query: 285 NASNSLINGLISMGRIEDAELIFNRLT----EANSISY---------------------- 318
N+++ G + E+A +F + + + ++
Sbjct: 392 VMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCV 451
Query: 319 -------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
N+ + Y+ YG + D+K LF +P++ IS
Sbjct: 452 TIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSIS----------------- 494
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WN++ G QN E+A+ + MR I +FS +ACS + + + G+ +H +
Sbjct: 495 WNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAI 554
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K SN VG+SL+D+YS+ G + ++ F+ + + ++ AL+ G+ + EA+
Sbjct: 555 KYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQ 614
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNE--GMKIFRSMKSYGVVPTLEHYTCVVDL 543
LF+ +L+ + P++ TF +LS C +G +N G ++ GV+ + V L
Sbjct: 615 LFQQVLKDGLKPSSVTFSSILSGC--SGSLNSAIGKQVHCYTLKSGVL--YDDTLLGVSL 670
Query: 544 LG---RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G +S L +A + + +MP + W A++S
Sbjct: 671 AGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 141/592 (23%), Positives = 261/592 (44%), Gaps = 95/592 (16%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
I+ +G+L A L +MP + V+WN ++ G+++ L L M +
Sbjct: 266 ISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTR 325
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
+TF+++LS A + + ++G+Q+H + G + FVGS L+ YA C +AK VFD
Sbjct: 326 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 385
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
E N ++W+ ML G+VQ L E+A+++
Sbjct: 386 SCEKNIVMWNAMLTGFVQNELP--------------------------------EEAIRM 413
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F++M +E+TF S++ AC L +F GK VH + IK + + A ++ Y
Sbjct: 414 FQYMMRYTLQT-DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYS 472
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-------------- 310
A A ++ + + N+L GL E+A + R+
Sbjct: 473 KYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFST 532
Query: 311 ----------TEAN------SISY---------NSMIKGYAVYGQVDDSKRLFEKMPHRS 345
TE +I Y +S+I Y+ +G V+ S+++F ++ S
Sbjct: 533 AINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASS 592
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
I+ + N++I+G+VQNN ++A+QL+ + K + + TFS +
Sbjct: 593 IVPI-----------------NALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSIL 635
Query: 406 HACSCLGSLQQ--GQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISS- 461
CS GSL G+ +H + +K+ + +G SL +Y + + DA + +
Sbjct: 636 SGCS--GSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 693
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
N+ WTA+++GY+ +G G +++ F M ++ + ATF VL AC +G +I
Sbjct: 694 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 753
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G + ++D+ + G + + E K++ + D + W +++
Sbjct: 754 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 193/392 (49%), Gaps = 23/392 (5%)
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
+ L+S +A+S + L FR++R + P+++ V+ AC+R+G G+ VH +
Sbjct: 126 SSLLSCHARSGSPGD-VLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDV 184
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
+K GF AL++ Y C A RV+D + P +S+I +G ++A
Sbjct: 185 VKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEAL 244
Query: 305 LIFNRLTEANS----ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
+F+R+ + S ++ ++I A G++D + L +KMP S
Sbjct: 245 ALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPST-------------- 290
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
V WN++ISG+ Q+ L L LY MR + TRSTF+ + A + + + +GQ +
Sbjct: 291 ---VAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQM 347
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA V ++NV+VG+SL+++Y++CG +DA+ F N+ W A++ G+ + L
Sbjct: 348 HAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELP 407
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
EA+ +F+ M+ + + TFV +L AC G ++ + +L
Sbjct: 408 EEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT 467
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+D+ + G + +A+ +P + D++ W AL
Sbjct: 468 LDMYSKYGAIGDAKALFSLIPYK-DSISWNAL 498
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/478 (21%), Positives = 205/478 (42%), Gaps = 66/478 (13%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G + A+ LF +P + +SWN + G ++ + +E++ ++ M + ++ +FST
Sbjct: 473 KYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFST 532
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
++ C+ + + GKQIHCL +K G VGS L+ Y+ ++E ++++F ++ +
Sbjct: 533 AINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASS 592
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ + ++ G+VQ N +A +F ++ K DG +
Sbjct: 593 IVPINALIAGFVQNNNEDEAIQLFQQVLK-----------------DGLK---------- 625
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES-IGGALIEFYCGCEA 268
P+ TF S++ C+ GK VH +K G +D++ +G +L Y +
Sbjct: 626 ------PSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKM 679
Query: 269 FDGAMRVYDRL-ENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIK 323
+ A ++ + ++ L ++I+G G + + + F R+ N ++ S++K
Sbjct: 680 LEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLK 739
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-------------------ERNPV 364
+ D K + + S T S + +M +++ +
Sbjct: 740 ACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIM 799
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
WNSMI G+ +N ++AL L+ M +L I TF + AC+ G + +G+ +
Sbjct: 800 PWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPM 859
Query: 425 VK----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
K TP + +D+ R G + +AQ + + P+ W + H
Sbjct: 860 RKVYGLTPRLDHY---ACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMH 914
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 22/161 (13%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+T+ I + G ++++ F ++ + ++ WN+M+ G++K DE+L L M
Sbjct: 767 TATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEE 826
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK--------SGYECF-EFVGSGLLFF 128
+K +E TF +L C + +G+ + K Y CF + +G G
Sbjct: 827 LQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRG---- 882
Query: 129 YANCFEIEEAKRVFDEL-HEDNELLWSLMLVGYVQCNLMSD 168
++EA+ D+L + ++W+ L C + D
Sbjct: 883 ----GHLQEAQEAIDQLPFRPDGVVWATYLAA---CRMHKD 916
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 200/674 (29%), Positives = 346/674 (51%), Gaps = 58/674 (8%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V N IT GR +AR +FD+MP + VSW +++ +++ + ++L L S+M RS
Sbjct: 77 VLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRS 136
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
++ + + CA+L + G+Q+H +KS GS L+ A
Sbjct: 137 GTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSEN------GSDLIVQNA-------- 182
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
++ Y + L++D F +F +M +KD + W +I+G+A+ GC
Sbjct: 183 -----------------LVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQ--QGC 223
Query: 199 E-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E +AL++FR M G + PNE+ F SV AC LG+ G+ +H L +K + + G
Sbjct: 224 EMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGC 283
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA---- 313
+L + Y C+ + A RV+ ++ P L + NS+IN G + +A ++ + + +
Sbjct: 284 SLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRP 343
Query: 314 ---------------NSISYNSMIKGYAVYGQVDDSKRLFEKM--PHRSIISLNTMISVI 356
++I + ++ Y V +D + + + + ++ + V
Sbjct: 344 DGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVF 403
Query: 357 PEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
E +R+ VTWNS+++ VQ+ E +L+ +++ R + + + A + LG +
Sbjct: 404 HETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFE 463
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGY 474
+ +H K ++ + L+D Y++CGS++DA F + ++ +V +W++L+ GY
Sbjct: 464 MVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGY 523
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPT 533
+ G +A+ LF M + PN TFVGVL+AC R GLV+EG + M+ +GV+PT
Sbjct: 524 AQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPT 583
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
EH +CV+DLL R+G L EA +F+ MP E D V+W LL+ ++E+G RAA+ +
Sbjct: 584 REHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGIL 643
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
+D +AYV+L NIY+ G W + ++K + VKK PG SW++L + F VED
Sbjct: 644 NIDPSHSAAYVLLCNIYSASGDWNEFARLKKAMRSSGVKKSPGKSWVKLKGELKVFIVED 703
Query: 654 RNNPNCNVIYATLE 667
R++P IY LE
Sbjct: 704 RSHPESEEIYTMLE 717
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 192/420 (45%), Gaps = 37/420 (8%)
Query: 228 CARLGAFCEGKVVHGLLIKC---GFEFDESIGGALIEFYCGCEAFDGAMRVYDRL--ENP 282
C+RL A C G +VH L+ + + LI Y C A + A V+D + +NP
Sbjct: 48 CSRLRALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNP 107
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK----------GYAVY 328
A S+I R DA +F+ + T + + S ++ G V+
Sbjct: 108 VSWA--SVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVH 165
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPE--------MERNPVTWNSMISGYVQNNLHE 380
Q S+ + + +++++ + ++ + E++P++W S+I+G+ Q
Sbjct: 166 AQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEM 225
Query: 381 KALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
+ALQ++ M + F +F AC LGSL+ G+ +H+ VK + N Y G SL
Sbjct: 226 EALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSL 285
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
DMY+RC + A+ F I +P++ +W +++N S GL SEA++L M + P+
Sbjct: 286 SDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDG 345
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
T G+L ACV + G + + G+ + ++ + R A + +
Sbjct: 346 ITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHE 405
Query: 560 MPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY--VILSNIYAVLGKWG 617
+ D V W ++L+AC ++EV K+F L ++ + + + L+N+ + + G
Sbjct: 406 TR-DRDVVTWNSILTACVQHQHLEV----VFKLFNLLQRSLPSLDRISLNNVLSASAELG 460
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 208/661 (31%), Positives = 329/661 (49%), Gaps = 91/661 (13%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES-LSLVSTMHRSN 79
T AI+ C L+ A+N+F+Q+P + WNT++ GY+ + +S L + +H +
Sbjct: 112 TAYAISSCS---CLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCS 168
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
N+ TF + ++L L G +H +V+K+ F+ + L+ FY + + A
Sbjct: 169 EFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAH 228
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC- 198
RVF MP KDVV W +I+ +A + G
Sbjct: 229 RVF-------------------------------TNMPGKDVVSWNAMINAFA--LGGLP 255
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+KAL LF+ M E + PN T SV+ ACA+ G+ + + GF + A
Sbjct: 256 DKALLLFQEM-EMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNA 314
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
+++ Y C G I DA+ +FN+++E + +S+
Sbjct: 315 MLDMYVKC-------------------------------GCINDAKDLFNKMSEKDIVSW 343
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
+M+ G+A G D++ +F+ MPH+ WN++IS Y QN
Sbjct: 344 TTMLDGHAKLGNYDEAHCIFDAMPHKWT-----------------AAWNALISAYEQNGK 386
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSC--LGSLQQGQLLHAHLVKTPFESNVYVG 436
AL L+ M+ L+ D +++ C+ LG++ G +H ++ K N ++
Sbjct: 387 PRVALSLFHEMQ-LSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLA 445
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
TSL+DMY++CG++N A F ++ +V W+A++ + +G G A+ LF MLE I
Sbjct: 446 TSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIK 505
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
PNA TF +L AC AGLVNEG ++F M+ YG+VP ++HY CVVD+ GR+G L +A
Sbjct: 506 PNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAAS 565
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
FI+ MPI A VWGALL AC N+E+ E A Q + L+ A+V+LSNIYA G
Sbjct: 566 FIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGD 625
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
W K ++RK + +VKK+P CS I++N VH F V D ++P IY+ L+ ++
Sbjct: 626 WEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKP 685
Query: 676 V 676
+
Sbjct: 686 I 686
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 127/334 (38%), Gaps = 52/334 (15%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E IVS + + G A +FD MP + +WN ++ Y + K +LSL
Sbjct: 337 EKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHE 396
Query: 75 MHRS-NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M S + K +E T L AQL ++ G IH + K + + LL YA C
Sbjct: 397 MQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCG 456
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+ +A VF + + +WS M+ A D+F + ++ Y K
Sbjct: 457 NLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLF-----------SSMLEAYIK 505
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
PN TF +++ AC G EG+ + FE E
Sbjct: 506 ----------------------PNAVTFTNILCACNHAGLVNEGEQL--------FEQME 535
Query: 254 SIGGALIE---FYCGCEAF------DGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDA 303
+ G + + + C + F + A +++ P A +L+ G +E A
Sbjct: 536 PLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELA 595
Query: 304 ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRL 337
EL + L E ++ + + +Y + D +++
Sbjct: 596 ELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKV 629
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 20/222 (9%)
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY--SRCGSINDAQASFSSISSPNVAAW 467
C ++Q Q+ HAH+++T + Y + L+ Y S C + A+ F+ I PN+ W
Sbjct: 82 CTNTMQLKQI-HAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCW 140
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVR-----AGLVNEGMKI 521
L+ GY+ +++ L+F ML PN TF + A R G V GM I
Sbjct: 141 NTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVI 200
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMN 581
S+ S L +++ G SG A +MP + D V W A+++A F +
Sbjct: 201 KASLSS-----DLFILNSLINFYGSSGAPDLAHRVFTNMPGK-DVVSWNAMINA--FALG 252
Query: 582 MEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
+ ++A ++ K + VI + +VL KK+D+
Sbjct: 253 -GLPDKALLLFQEMEMKDVKPNVI--TMVSVLSACAKKIDLE 291
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 199/690 (28%), Positives = 350/690 (50%), Gaps = 100/690 (14%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
R G + +A+ +F+QM R V+ N ++ G ++ + +E+ + M + V++N ++++
Sbjct: 296 ARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYA 354
Query: 89 TILSVCAQLNSLIDGK----QIHCLVLKSGY-ECFEFVGSGLLFFYANCFEIEEAKRVFD 143
+LS + ++L +GK ++H ++++ + + +G+ L+ YA
Sbjct: 355 VLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYA------------- 401
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+CN + +A +F MP KD V W +ISG + + E+A+
Sbjct: 402 ------------------KCNAIDNARSIFQLMPSKDTVSWNSIISGLDHN-ERFEEAVA 442
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
F MR +G +P++++ S + +CA LG G+ +HG IKCG + D S+ AL+ Y
Sbjct: 443 CFHTMRRNGM-VPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLY 501
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLIS--------------------------- 296
+ + +V+ + + NS I L +
Sbjct: 502 AETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTF 561
Query: 297 --------------MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
+GR A ++ + + + N+I N+++ Y Q++D + +F +M
Sbjct: 562 INILSAVSSLSLLELGRQIHALILKHSVADDNAIE-NTLLAFYGKCEQMEDCEIIFSRMS 620
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
R R+ V+WN+MISGY+ N + KA+ L M + T +
Sbjct: 621 ER----------------RDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLA 664
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ AC+ + +L++G +HA ++ E+ V VG++LVDMY++CG I+ A F +
Sbjct: 665 TVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVR 724
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
N+ +W ++++GY+ HG G +A+ LF M + +P+ TFVGVLSAC GLV+EG + F
Sbjct: 725 NIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHF 784
Query: 523 RSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW-- 579
+SM + Y + P +EH++C+VDLLGR+G + + EEFIK MP+ +A++W +L AC
Sbjct: 785 KSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANS 844
Query: 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSW 639
N E+G RAA+ + L+ YV+LSN++A GKW + R + + EVKK+ GCSW
Sbjct: 845 RNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSW 904
Query: 640 IELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+ + VH F D+ +P IY L+ +
Sbjct: 905 VTMKDGVHVFVAGDQTHPEKEKIYDKLKEI 934
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 152/616 (24%), Positives = 265/616 (43%), Gaps = 102/616 (16%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G LV+A+ LFD+MP + +VSW+ ++ GY++ DE+ L + + + N +
Sbjct: 86 RAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGS 145
Query: 90 ILSVCAQL--NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC-FEIEEAKRVFDELH 146
L C +L N L G +IH L+ KS Y + + L+ Y++C I++A+RVF+E
Sbjct: 146 ALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEE-- 203
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
IKM K W +IS Y + D A KLF
Sbjct: 204 ---------------------------IKM--KTSASWNSIISVYCRRGDAI-SAFKLFS 233
Query: 207 WMRESGENM---PNEYTFDSVIR-ACARLGAFCEGKVVHGLLI---KCGFEFDESIGGAL 259
M+ + PNEYTF S++ AC+ + C ++ +L K F D +G AL
Sbjct: 234 SMQREATELNCRPNEYTFCSLVTVACSLVD--CGLTLLEQMLARIEKSSFVKDLYVGSAL 291
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR---LTEANSI 316
+ + D A +++++++ N L+ GL + E+A IF L E N+
Sbjct: 292 VSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINAS 351
Query: 317 SYNSMIKGYAVYGQVDDSKR---------------------------LFEKMPHRSIISL 349
SY ++ + + + + KR L+ K +I +
Sbjct: 352 SYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKC--NAIDNA 409
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL--FHA 407
++ ++P ++ V+WNS+ISG N E+A+ + TMR+ + S FSV+ +
Sbjct: 410 RSIFQLMP--SKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGM--VPSKFSVISTLSS 465
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ LG + GQ +H +K + +V V +L+ +Y+ + + Q F + + +W
Sbjct: 466 CASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSW 525
Query: 468 TALMNGYSHHGLGSEAVLLFEI-----MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
+ + + SEA +L I M++ PN TF+ +LSA L+ G +I
Sbjct: 526 NSFIGALA----TSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIH 581
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA------- 575
+ + V ++ G+ + + E M D V W A++S
Sbjct: 582 ALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGIL 641
Query: 576 ----CWFWMNMEVGER 587
W+ M+ G+R
Sbjct: 642 HKAMGLVWLMMQKGQR 657
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 151/369 (40%), Gaps = 70/369 (18%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+++ + G + +++LF++MP ++N V+W+ ++SGY QN +
Sbjct: 78 NTLVNIFVRAGNLVSAQKLFDEMP-----------------QKNLVSWSCLVSGYAQNGM 120
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS--LQQGQLLHAHLVKTPFESNVYVG 436
++A L+ + + AC LG L+ G +H + K+P+ S++ +
Sbjct: 121 PDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLS 180
Query: 437 TSLVDMYSRC-GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM----L 491
L+ MYS C SI+DA+ F I A+W ++++ Y G A LF M
Sbjct: 181 NVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREAT 240
Query: 492 EQDIVPNAATFVGVLS-AC------------------------------------VRAGL 514
E + PN TF +++ AC R GL
Sbjct: 241 ELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGL 300
Query: 515 VNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP--IELDAVVWGAL 572
++ IF M V ++ L R EA + K+M +E++A + L
Sbjct: 301 IDSAKMIFEQMDDRNAVTM----NGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVL 356
Query: 573 LSACWFWMNMEVGERAAQKM--FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630
LSA + N++ G+R Q++ + + + ++++ N L +D + + L
Sbjct: 357 LSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLM 416
Query: 631 VKKDPGCSW 639
KD SW
Sbjct: 417 PSKDT-VSW 424
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+++ LH + KT S+V+ +LV+++ R G++ AQ F + N+ +W+ L++
Sbjct: 54 TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVS 113
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG--LVNEGMKI 521
GY+ +G+ EA +LF ++ ++PN L AC G ++ GM+I
Sbjct: 114 GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEI 164
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +V + + + G++ A F+ MP+R + SWN+M+ GY++ ++L L +
Sbjct: 692 EAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQ 751
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
M + + TF +LS C+ H ++ G+E F+ +G
Sbjct: 752 MKQHGQLPDHVTFVGVLSACS-----------HVGLVDEGFEHFKSMG 788
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 190/611 (31%), Positives = 307/611 (50%), Gaps = 58/611 (9%)
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
E F ++L C + L +++ ++ G++ +V ++ + ++ A+ +FD
Sbjct: 25 EEHFISLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFD 81
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ LW+ + GY + +F KM DV
Sbjct: 82 HFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDV---------------------- 119
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
PN +TF V+++CA++GAF EG+ +H +IK G E ++ + LI+ Y
Sbjct: 120 -----------RPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVY 168
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIK 323
G A A +++ + + A S+I+G I R+ A +F+ E + + +N M+
Sbjct: 169 SGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVS 228
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEM-ERNPVTWNSM 369
GY G + +++LF+ MP+R +S NTM++ + EM ERN +WN +
Sbjct: 229 GYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGL 288
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAID----RTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
I GY N + L+ + +++ ID +T + AC+ LG+L G+ +H +
Sbjct: 289 IGGYAHNGCFFEVLRCF---KRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAA 345
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
F+ ++YVG +L+DMYS+CG I +A F S+ ++ W +++ G + HG G++A+
Sbjct: 346 TIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALT 405
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
LF M P+ TF+GVL +C GLV EG F SM Y + P +EHY C+VDL
Sbjct: 406 LFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLF 465
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L A EF+K MP+E DAV+W ALL AC + N+++ E A QK+ L+ K + YV
Sbjct: 466 GRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYV 525
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+LSNIY LG+W ++ + KK PGCS IE+N V F D + IY
Sbjct: 526 LLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYG 585
Query: 665 TLEHLTANLNS 675
L+ L L S
Sbjct: 586 VLKGLMKLLRS 596
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 216/485 (44%), Gaps = 83/485 (17%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
Q+ AR+LFD P V WN + GY A + E + L M +V+ N TF +L
Sbjct: 72 QMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLK 131
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN--------------------- 131
CA++ + ++G++IHC V+K G E +FV + L+ Y+
Sbjct: 132 SCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVA 191
Query: 132 ----------CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
C + A+R+FD E + +LW++M+ GY++ M A +F MP +D
Sbjct: 192 WTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDT 251
Query: 182 VVWTKLISGYAKS--VDGCEK----------------------------ALKLFRWMRES 211
+ W +++GYA + V+ CE+ L+ F+ M
Sbjct: 252 MSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLID 311
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G +PN+ T +V+ ACARLGA GK VH GF+ +G ALI+ Y C +
Sbjct: 312 GLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIEN 371
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAV 327
AM V++ ++ L NS+I GL + G DA +F+++ + + I++ ++
Sbjct: 372 AMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTH 431
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V++ F M + S+ P++E + M+ + + L ++A++
Sbjct: 432 LGLVEEGTSYFNSMVNE--------YSIAPQIEH----YGCMVDLFGRAGLLDRAIEF-- 477
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL-LHAHLVKTPFESNVYVGTSLVDMYSRC 446
++++ ++ ++ L AC ++ +L L +V P YV L ++Y
Sbjct: 478 -VKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYV--LLSNIYGDL 534
Query: 447 GSIND 451
G D
Sbjct: 535 GRWKD 539
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 165/412 (40%), Gaps = 77/412 (18%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
MK T+ ++T+ S N + NG + LF++MP R V SWN ++ GY+
Sbjct: 236 MKAARKLFDTMPYRDTM--SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYA 293
Query: 61 KWAKFDESLSLVSTMHRSNVKL-NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
F E L M + + N+ T T+LS CA+L +L GK +H G++
Sbjct: 294 HNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSI 353
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
+VG+ L+ Y+ C IE A VF+ + + + W+ M+ G
Sbjct: 354 YVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGL------------------- 394
Query: 180 DVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+ GC AL LF M+ +GE P+ TF V+ +C LG EG
Sbjct: 395 --------------ATHGCGADALTLFHQMKINGEK-PDGITFIGVLCSCTHLGLVEEGT 439
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM---RVYDRLENPCLNASNSLINGLI 295
++ + SI + + C + F A R + ++ + A + L+
Sbjct: 440 SYFNSMVN-----EYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 494
Query: 296 SMGR----IEDAELIFNRLT---EANSISYNSMIKGYAVYGQVDDSKRL--------FEK 340
R I+ AEL +L N +Y + Y G+ D RL +K
Sbjct: 495 GACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKK 554
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+P S+I +N +S++ Y + H ++ ++Y ++ L
Sbjct: 555 LPGCSLIEVN----------------DSVVEFYSLDERHSQSKEIYGVLKGL 590
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 206/707 (29%), Positives = 347/707 (49%), Gaps = 85/707 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ N + G+ G + +FD++ R VSWN+ + ++ K++++L M
Sbjct: 128 VTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQM 187
Query: 78 SNVKLNETTFSTILSVCAQL---NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
N++L+ T ++ C+ L + L GKQ+H L+ G + F + L+ YA
Sbjct: 188 ENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQ-KTFTNNALMAMYAKLGR 246
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
++++K +F+ + +D+V W +IS +++S
Sbjct: 247 VDDSKALFESFVD-------------------------------RDMVSWNTMISSFSQS 275
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
D +AL FR M G + + T SV+ AC+ L GK +H +++ + S
Sbjct: 276 -DRFSEALAFFRLMVLEGVEL-DGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENS 333
Query: 255 -IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF------ 307
+G AL++ YC C + RV+D + + N++I+G G E A ++F
Sbjct: 334 FVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKV 393
Query: 308 -----NRLTEAN---------SISYNSMIKGYAVYGQVDDSKRLFEKMP--HRSIISLNT 351
N T A+ + S I GYAV + + + + + + ++
Sbjct: 394 AGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDI 453
Query: 352 MISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKL-----------------A 393
++ ME R+ V+WN+MI+GYV + + AL L M+++
Sbjct: 454 SETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGP 513
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
T + C+ L ++ +G+ +HA+ ++ S++ VG++LVDMY++CG +N ++
Sbjct: 514 YKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSR 573
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ-----DIVPNAATFVGVLSA 508
F+ + + NV W L+ HG G EA+ LF+ M+ + + PN TF+ V +A
Sbjct: 574 RVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAA 633
Query: 509 CVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C +GL++EG+ +F MK +GV PT +HY CVVDLLGR+G L EA E + MP E D V
Sbjct: 634 CSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKV 693
Query: 568 -VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
W +LL AC N+E+GE AA+ + L+ S YV+LSNIY+ G W K M++RK +
Sbjct: 694 GAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNM 753
Query: 627 THLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ VKK+PGCSWIE VH F D ++P ++ LE L+ +
Sbjct: 754 RQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKM 800
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 136/579 (23%), Positives = 241/579 (41%), Gaps = 84/579 (14%)
Query: 45 PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
P R+ SW L ++ F E++S M S + + F +L + L L G+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 105 QIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
QIH +K GY V + L+ Y C I + +VFD
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFD-------------------- 152
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP-NEYTFD 222
++ +D V W I+ + + E+AL+ FR M+ ENM + +T
Sbjct: 153 -----------RITDRDQVSWNSFIAALCR-FEKWEQALEAFRAMQM--ENMELSSFTLV 198
Query: 223 SVIRACARLGAFCE---GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
SV AC+ LG GK +HG ++ G + AL+ Y D + +++
Sbjct: 199 SVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESF 257
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRL-----TEANSISYNSMIKGYAVYGQVDDS 334
+ + + N++I+ R +A L F RL E + ++ S++ + ++D
Sbjct: 258 VDRDMVSWNTMISSFSQSDRFSEA-LAFFRLMVLEGVELDGVTIASVLPACSHLERLDVG 316
Query: 335 KRLFEKMPHRSIISLNTMI-SVIPEM------------------ERNPVTWNSMISGYVQ 375
K + + + + N+ + S + +M R WN+MISGY +
Sbjct: 317 KEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYAR 376
Query: 376 NNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
N L EKAL L++ M K+A + +T + + AC + + +H + VK F+ + Y
Sbjct: 377 NGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRY 436
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
V +L+DMYSR G ++ ++ F S+ + +W ++ GY G S A++L M +
Sbjct: 437 VQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRME 496
Query: 495 IV-----------------PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
PNA T + VL C + +G +I + +
Sbjct: 497 NTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVG 556
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+ +VD+ + G L+ + +MP + + + W L+ AC
Sbjct: 557 SALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMAC 594
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 200/656 (30%), Positives = 324/656 (49%), Gaps = 56/656 (8%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
NG + AR +FD++P+R + WN ML GY K FD ++ M S +N T++ I
Sbjct: 160 NGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCI 219
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
LS+CA + G Q+H LV+ SG+E V + L+ Y+ C + A+++F+
Sbjct: 220 LSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFN------- 272
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
MP+ D V W LI+GY ++ ++A LF M
Sbjct: 273 ------------------------TMPQTDTVTWNGLIAGYVQN-GFTDEAAPLFNAMIS 307
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+G P+ TF S + + G+ K VH +++ FD + ALI+ Y +
Sbjct: 308 AGVK-PDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVE 366
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA 326
A +++ + + ++I+G + G DA F L + NS++ S++ A
Sbjct: 367 MARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACA 426
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNS 368
+ K L + + + ++ + S I +M +R+ V WNS
Sbjct: 427 AVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNS 486
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
MIS + QN E A+ L+ M + S A + L +L G+ +H ++++
Sbjct: 487 MISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNA 546
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
F S+ +V ++L+DMYS+CG++ A F+ + N +W +++ Y +HG E + L+
Sbjct: 547 FSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYH 606
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
ML I P+ TF+ ++SAC AGLV+EG+ F M + YG+ +EHY C+VDL GR+
Sbjct: 607 EMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRA 666
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G +HEA + IK MP DA VWG LL AC N+E+ + A++ + LD K YV+LS
Sbjct: 667 GRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLS 726
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
N++A G+W + +R + V+K PG SWI++N H FS D N+P IY
Sbjct: 727 NVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGNHPESVEIY 782
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 218/481 (45%), Gaps = 55/481 (11%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G+ A NLF ++ +R + WN M+ G FD +L M SNV ++ TF ++
Sbjct: 60 GRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVI 119
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C LN++ +H G+ F GS L+ YA+ I +A+RVFDEL
Sbjct: 120 KACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDEL------ 173
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
P +D ++W ++ GY KS D + A+ F MR S
Sbjct: 174 -------------------------PLRDTILWNVMLRGYVKSGD-FDNAIGTFCEMRTS 207
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+M N T+ ++ CA G FC G +HGL+I GFEFD + L+ Y C
Sbjct: 208 -YSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLY 266
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAV 327
A ++++ + N LI G + G ++A +FN + A +S+++ S +
Sbjct: 267 ARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILE 326
Query: 328 YGQVDDSKRLFEKM-PHRSIISLNTMISVIP--------EMERNPVTWN---------SM 369
G + K + + HR + ++I EM R N +M
Sbjct: 327 SGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAM 386
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
ISGYV + L+ A+ + + + + T + + AC+ + +L+ G+ LH H++K
Sbjct: 387 ISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRL 446
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
E+ V VG+++ DMY++CG ++ A F +S + W ++++ +S +G A+ LF
Sbjct: 447 ENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQ 506
Query: 490 M 490
M
Sbjct: 507 M 507
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 119/515 (23%), Positives = 217/515 (42%), Gaps = 60/515 (11%)
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
T ++ C+ + + +Q+H V+ G S +L Y C +A +F E
Sbjct: 12 TQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFE 71
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
L L W+ M+ G A + KM +V
Sbjct: 72 LELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVS---------------------- 109
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
P++YTF VI+AC L VVH GF D G ALI+ Y
Sbjct: 110 -----------PDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYA 158
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNS 320
A RV+D L N ++ G + G ++A F + + NS++Y
Sbjct: 159 DNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTC 218
Query: 321 MIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNT----------MISVIPEME 360
++ G ++G V S F+ +++++ + + + +P+ +
Sbjct: 219 ILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTD 278
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
VTWN +I+GYVQN ++A L+ M + TF+ + GSL+ + +
Sbjct: 279 T--VTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEV 336
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H+++V+ +VY+ ++L+D+Y + G + A+ F +VA TA+++GY HGL
Sbjct: 337 HSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLN 396
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
+A+ F ++++ +V N+ T VL AC + G ++ + + + + +
Sbjct: 397 IDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAI 456
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
D+ + G L A EF + M + D+V W +++S+
Sbjct: 457 TDMYAKCGRLDLAYEFFRRMS-DRDSVCWNSMISS 490
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 131/538 (24%), Positives = 229/538 (42%), Gaps = 66/538 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N + + G L+ AR LF+ MP V+WN ++ GY + DE+ L + M + V
Sbjct: 251 ANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGV 310
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
K + TF++ L + SL K++H +++ ++ S L+ Y ++E A++
Sbjct: 311 KPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARK 370
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY---AKSVDG 197
+F Q N++ DV V T +ISGY ++D
Sbjct: 371 IF-------------------QQNILV------------DVAVCTAMISGYVLHGLNID- 398
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
A+ FRW+ + G + N T SV+ ACA + A GK +H ++K E ++G
Sbjct: 399 ---AINTFRWLIQEGM-VTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGS 454
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
A+ + Y C D A + R+ + NS+I+ G+ E A +F ++ + +
Sbjct: 455 AITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGA-K 513
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPH----RSIISLNTMI-SVIPEM------------- 359
++S+ A+ + + K H R+ S +T + S + +M
Sbjct: 514 FDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCV 573
Query: 360 -----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+N V+WNS+I+ Y + + L LY M + I TF V+ AC G +
Sbjct: 574 FNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLV 633
Query: 415 QQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMN 472
+G H + + + +VD+Y R G +++A + S+ +P+ W L+
Sbjct: 634 DEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLG 693
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
HG A L +LE D N+ +V + + AG +K+ MK GV
Sbjct: 694 ACRLHGNVELAKLASRHLLELD-PKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGV 750
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 1/180 (0%)
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+D + LF ACS +QQ + +H ++ + ++ +Y CG DA
Sbjct: 7 LDSLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAG 66
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F + W ++ G G A+L + ML ++ P+ TF V+ AC
Sbjct: 67 NLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLN 126
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V M + + +S G L + ++ L +G++ +A ++P+ D ++W +L
Sbjct: 127 NVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLR-DTILWNVML 185
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 192/543 (35%), Positives = 300/543 (55%), Gaps = 62/543 (11%)
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
+W +I Y+ D E A+ L M E+G +++T V++AC+R+G EG +HG
Sbjct: 94 LWNAIIKTYSHGHDPKE-AMWLVSLMLENGA-FADKFTLSLVLKACSRVGLVKEGMQIHG 151
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
LL K F D + LI FY C A +V+DR+ + NS+I+G + GRI+
Sbjct: 152 LLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDL 211
Query: 303 AELIFN--RLTEANSISYNSMIKGYAVY-------------------------------- 328
A ++F+ L E N IS+NS+I+GYA
Sbjct: 212 ARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKMPERDLISWNSMIDGCVKC 271
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ERNPVTWNSMISGYV 374
G+++D++ LF++MP+R I+S MI S+ EM ER+ V +N+M+ GYV
Sbjct: 272 GRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYV 331
Query: 375 QNNLHEKALQLYMTMR---KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
QN +AL ++ M+ +D +T + A + LG + +G +H + + F
Sbjct: 332 QNGYCMEALGIFYGMQSDGNFLLDN--ATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSL 389
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+ +G +L+DMYS+CGSI +A F +I +V W A++ G + HGLG L F+ ++
Sbjct: 390 DGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGE---LAFDFLM 446
Query: 492 EQD---IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRS 547
E + + P+ TF+G+L+AC AGLV EGM F M+ + V P L+HY C+VD+LGR+
Sbjct: 447 EMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRA 506
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
GH+ EA+ F+++MP E + V+W +LLSAC + VG+ A+ + LD S+YV+ S
Sbjct: 507 GHIEEAKNFVEEMPFEPNDVIWRSLLSACKTHESFNVGQPVAENLMRLDSPSPSSYVLAS 566
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
N+YA LGKW +R + +KK PGCSWIEL V+AF V+D+++P + IY+ L+
Sbjct: 567 NMYAGLGKWNDVRKVRAMMKQKNLKKIPGCSWIELEGHVYAFFVQDKSHPQFSGIYSILD 626
Query: 668 HLT 670
L+
Sbjct: 627 SLS 629
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 203/457 (44%), Gaps = 71/457 (15%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
VS N I + G++ AR +FD +P+ R ++SWN+++ GY++ E LV+
Sbjct: 194 VSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQ----SEDGILVAW-- 247
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ K+ E + NS+IDG C+ C +E
Sbjct: 248 QLFAKMPERDLIS-------WNSMIDG----CV---------------------KCGRME 275
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+A+ +FD + + + W+ M+ GY + + A +F +MP++DVV + ++ GY ++
Sbjct: 276 DAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQN-G 334
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
C +AL +F M+ G + + T + A A+LG +G +H + + GF D +G
Sbjct: 335 YCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLG 394
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL------ 310
ALI+ Y C + + AM V++ ++ ++ N++I GL G EL F+ L
Sbjct: 395 VALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGL---GELAFDFLMEMERM 451
Query: 311 -TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
E + I++ ++ G V + FE M + V P+++ + M
Sbjct: 452 RVEPDDITFIGLLNACGHAGLVKEGMMCFELM--------RRVHKVEPKLQH----YGCM 499
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK--T 427
+ + E+A + ++ + + L AC S GQ + +L++ +
Sbjct: 500 VDILGRAGHIEEAKNF---VEEMPFEPNDVIWRSLLSACKTHESFNVGQPVAENLMRLDS 556
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
P S+ YV S +MY+ G ND + + + N+
Sbjct: 557 PSPSS-YVLAS--NMYAGLGKWNDVRKVRAMMKQKNL 590
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 16/307 (5%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IVS I +NG++ AR+LFD+MP R VV++N M+ GY + E+L + M
Sbjct: 289 IVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQS 348
Query: 78 -SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
N L+ T LS AQL + G IH + + G+ +G L+ Y+ C IE
Sbjct: 349 DGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIE 408
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK----KDVVVWTKLIS--G 190
A VF+ + E + W+ ++ G L AFD ++M + D + + L++ G
Sbjct: 409 NAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACG 468
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
+A V ++ + F MR + P + ++ R G E K + + FE
Sbjct: 469 HAGLV---KEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAK---NFVEEMPFE 522
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYD---RLENPCLNASNSLINGLISMGRIEDAELIF 307
++ I +L+ E+F+ V + RL++P ++ N +G+ D +
Sbjct: 523 PNDVIWRSLLSACKTHESFNVGQPVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRKVR 582
Query: 308 NRLTEAN 314
+ + N
Sbjct: 583 AMMKQKN 589
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 180/587 (30%), Positives = 297/587 (50%), Gaps = 49/587 (8%)
Query: 105 QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
QI ++ +G++ E++ L+ A + A+++FD++ + N LW+ M GY Q
Sbjct: 119 QIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSE 178
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
+ +F +M D+ PN +TF V
Sbjct: 179 SYREVVFLFFQMKGMDI---------------------------------RPNCFTFPVV 205
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+++C ++ A EG+ VH LIKCGF + +G LI+ Y A +++ + +
Sbjct: 206 LKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNV 265
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
A S+ING I + A +F+ E + + +N M+ GY G + ++++LF +MP+R
Sbjct: 266 VAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNR 325
Query: 345 SIISLNTMI-------------SVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTM- 389
++ NT++ + EM ERN +WN++I GY N L + L + M
Sbjct: 326 DVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRML 385
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+ + +T + AC+ LG+L G+ +H + + + NVYVG +L+DMY++CG I
Sbjct: 386 SESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGII 445
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+A + F + + ++ +W L+ G + H G++A+ LF M P+ TF+G+L AC
Sbjct: 446 ENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCAC 505
Query: 510 VRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
GLV +G F+SM Y ++P +EHY C+VD+L R+G L +A F++ MP+E D V+
Sbjct: 506 THMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVI 565
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W LL AC + N+E+ E A Q++ L+ K + YV+LSNIY G+W ++ +
Sbjct: 566 WAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRD 625
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
KK PGCS IE+N V F D +P IY L L L S
Sbjct: 626 TGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRS 672
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 221/497 (44%), Gaps = 83/497 (16%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
T K +T C ++ AR LFDQ+P + WN+M GY++ + E + L M ++
Sbjct: 136 TPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDI 195
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA---------- 130
+ N TF +L C ++N+LI+G+Q+HC ++K G+ FVG+ L+ Y+
Sbjct: 196 RPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYK 255
Query: 131 ---NCFE------------------IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
FE + A+R+FD E + +LW++M+ GY++ M +A
Sbjct: 256 IFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEA 315
Query: 170 FDVFIKMPKKDVVVWTKLISGYAK--SVDGCE---------------------------- 199
+F +MP +DV+ W ++ GYA +V+ E
Sbjct: 316 RKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFF 375
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+ L F+ M + PN+ T +V+ ACARLGA GK VH G + + +G AL
Sbjct: 376 EVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNAL 435
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NS 315
++ Y C + A+ V+ ++ L + N+LI GL R DA +F ++ A +
Sbjct: 436 MDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDG 495
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
I++ ++ G V+D F+ M +I +P++E + M+ +
Sbjct: 496 ITFIGILCACTHMGLVEDGFAYFQSMADDYLI--------MPQIEH----YGCMVDMLAR 543
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVY 434
E+A +RK+ ++ ++ L AC +++ +L L++ P Y
Sbjct: 544 AGRLEQAXAF---VRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANY 600
Query: 435 VGTSLVDMYSRCGSIND 451
V L ++Y G D
Sbjct: 601 V--MLSNIYGDAGRWED 615
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 148/359 (41%), Gaps = 52/359 (14%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL-SLVSTMHRSNV 80
N + NG + LF++MP R + SWN ++ GY+ F E L S + S+V
Sbjct: 331 NTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDV 390
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
N+ T T+LS CA+L +L GK +H SG + +VG+ L+ YA C IE A
Sbjct: 391 PPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAIS 450
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVD 196
VF + + + W+ ++ G + +DA ++F +M K D + + ++ +
Sbjct: 451 VFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCA-CTHMG 509
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E F+ M + MP + ++ AR G + + K E D I
Sbjct: 510 LVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXA---FVRKMPVEADGVIW 566
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE---A 313
L+ GA R+Y +E AEL RL E
Sbjct: 567 AGLL----------GACRIYK---------------------NVELAELALQRLIELEPK 595
Query: 314 NSISYNSMIKGYAVYGQVDDSKRL--------FEKMPHRSIISLNTMISVIPEM-ERNP 363
N +Y + Y G+ +D RL F+K+P S+I +N + + ER+P
Sbjct: 596 NPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHP 654
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
SC S Q Q+ A ++ F+ N Y+ LV + + + A+ F I PN+A W
Sbjct: 110 SCKTSKQVHQI-QAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWN 168
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
++ GY+ E V LF M DI PN TF VL +C + + EG ++ +
Sbjct: 169 SMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKC 228
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G T ++D+ G + +A + +M E + V W ++++
Sbjct: 229 GFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSMING 274
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 194/665 (29%), Positives = 346/665 (52%), Gaps = 57/665 (8%)
Query: 45 PIRT----VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSL 100
P RT V +N + + + + ++ LV +S +L T+ ++L +CA L SL
Sbjct: 58 PTRTIDHQVTDYNAKILHFCQLGDLENAMELVCMCQKS--ELETKTYGSVLQLCAGLKSL 115
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
DGK++H ++ + E +G L+ FYA C +++E +RVFD + + N LW+ M+ Y
Sbjct: 116 TDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEY 175
Query: 161 VQCNLMSD--------------------AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+ + A ++F K+ +DV+ W +ISGY S E+
Sbjct: 176 AKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYV-SNGLTER 234
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
L +++ M G ++ + T SV+ CA G GK VH L IK FE + L+
Sbjct: 235 GLGIYKQMMYLGIDV-DLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLL 293
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSI 316
+ Y C DGA+RV++++ + + S+I G G + A ++ ++ + + +
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVV 353
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
+ S++ A G +D+ K + + I N M S N N+++ Y +
Sbjct: 354 AITSILHACARSGSLDNGKDVHD------YIKANNMAS-------NLFVCNALMDMYAKC 400
Query: 377 NLHEKALQLYMTMRKLAI----------DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
E A ++ TM I T + + AC+ L +L++G+ +H ++++
Sbjct: 401 GSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILR 460
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ S+ +V +LVD+Y +CG + A+ F I S ++ +WT ++ GY HG G+EA+
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIAT 520
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLG 545
F M + I P+ +F+ +L AC +GL+ +G + F MK+ + + P LEHY C+VDLL
Sbjct: 521 FNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLS 580
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G+L +A +FI+ +PI DA +WGALL C + ++E+ E+ A+++F L+ + YV+
Sbjct: 581 RTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVL 640
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF-SVEDRNNPNCNVIYA 664
L+NIYA K + +R+++ ++K+PGCSWIE+ RV+ F S + ++P+ I +
Sbjct: 641 LANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIES 700
Query: 665 TLEHL 669
L+ +
Sbjct: 701 LLKKM 705
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/502 (22%), Positives = 196/502 (39%), Gaps = 131/502 (26%)
Query: 23 KAITECGRNGQLV-TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
K + E G G+ +A LFD++ R V+SWN+M+ GY + L + M +
Sbjct: 189 KIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 248
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ T ++L CA +L GK +H L +KS +E + LL Y+ C +++ A RV
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRV 308
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISG------- 190
F+++ E N + W+ M+ GY + A + +M K+ DVV T ++
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSL 368
Query: 191 ----------------------------YAK--SVDGCEKALK------LFRWMRESGEN 214
YAK S++G + W GE
Sbjct: 369 DNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL 428
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P+ T ++ ACA L A GK +HG +++ G+ D + AL++ Y C
Sbjct: 429 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC-------- 480
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
G++ + R L+F+ + + +S+ MI GY ++G +++
Sbjct: 481 ------------------GVLGLAR-----LLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
F +M R I
Sbjct: 518 IATFNEM------------------------------------------------RDAGI 529
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDA 452
+ +F + +ACS G L+QG +++K F E + +VD+ SR G+++ A
Sbjct: 530 EPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 588
Query: 453 QASFSSIS-SPNVAAWTALMNG 473
++ +P+ W AL+ G
Sbjct: 589 YKFIETLPIAPDATIWGALLCG 610
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 305/559 (54%), Gaps = 65/559 (11%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM-PKKDVVVWTKLISGYA 192
I EA+R+FDE+ E + + W+ ++ GY++C ++ +A +F ++ KK+VV WT ++ GY
Sbjct: 82 RIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYI 141
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+S + A KLF MPN+
Sbjct: 142 RS-NKISDAEKLF-------NEMPNKNVVS------------------------------ 163
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+I+ Y D AM +++++ + + N++++ L GRIE+A +F+R+ E
Sbjct: 164 ---WNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPE 220
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEM 359
+ IS+ +MI G +D++ LFE+MP R + S NTMI+ + EM
Sbjct: 221 RDVISWTAMIAGL-----LDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEM 275
Query: 360 -ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL-AIDRTRSTFSVLFHACSCLGSLQQG 417
++N ++W +MI+G VQ E+AL+++ M + TF + ACS L L +G
Sbjct: 276 PKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEG 335
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS--ISSPNVAAWTALMNGYS 475
Q +H + KT ++ + +V ++L++MYS+CG + A+ F S ++ +W ++ Y+
Sbjct: 336 QQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYA 395
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTL 534
HHG G EA+ F+ M + P+ T+VG+LSAC AGLV EG+K F + K ++
Sbjct: 396 HHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVRE 455
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
+HY C+VDL GR+G L EA FI+ + + A VWGALL+ C N+++G++AA+K+
Sbjct: 456 DHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLE 515
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
++ + Y++LSNIYA GKW + +R ++ +KK PGCSWIE+ +RVH F V D+
Sbjct: 516 VEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDK 575
Query: 655 NNPNCNVIYATLEHLTANL 673
++ +IY+ L L + +
Sbjct: 576 SHSQSKLIYSLLRDLHSKM 594
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 222/510 (43%), Gaps = 108/510 (21%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R+ ++ A LF++MP + VVSWNTM+ GY++ + D ++ L M NV +++T
Sbjct: 142 RSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV----VSWNT 197
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
++S+ AQ + + +++ + + + + +GLL +EA +F+ + E +
Sbjct: 198 VMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLL---------DEALDLFERMPERD 248
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
W+ M+ G +Q + A +F +MPKK+V+ WT +I+G + + E+ALK+F M
Sbjct: 249 LPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGE-SEEALKIFSRML 307
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+ PN+ TF SV+ AC+ L EG+ VH ++ K ++ + ALI Y C
Sbjct: 308 STNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGEL 367
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
A +++D +G+ S + + +S+N +I YA +G
Sbjct: 368 GTARKMFD--------------DGMTS---------------QRDLVSWNGIIAAYAHHG 398
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
++ F++M SG+ +++
Sbjct: 399 YGKEAINFFKEMRK---------------------------SGFKPDDV----------- 420
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS----LVDMYSR 445
T+ L ACS G +++G LVK + ++ V LVD+ R
Sbjct: 421 ----------TYVGLLSACSHAGLVEEGLKYFDELVK---DRSILVREDHYACLVDLCGR 467
Query: 446 CGSINDAQASFSSI-SSPNVAAWTALMNGYSHHG---LGSEAV-LLFEIMLEQDIVPNAA 500
G + +A + + P+ W AL+ G + H +G +A L E+ E NA
Sbjct: 468 AGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPE-----NAG 522
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
T++ + + G E ++ MK G+
Sbjct: 523 TYLLLSNIYASTGKWREAARVRLKMKDKGL 552
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 155/338 (45%), Gaps = 37/338 (10%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E + S N IT +NG L AR LF++MP + V+SW TM+ G + + +E+L + S
Sbjct: 246 ERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSR 305
Query: 75 MHRSN-VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M +N K N+ TF ++L C+ L L +G+Q+H ++ K+ Y+ FV S L+ Y+ C
Sbjct: 306 MLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCG 365
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
E+ A+++FD+ G ++D+V W +I+ YA
Sbjct: 366 ELGTARKMFDD--------------GMTS---------------QRDLVSWNGIIAAYAH 396
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFD 252
G E A+ F+ MR+SG P++ T+ ++ AC+ G EG K L+
Sbjct: 397 HGYGKE-AINFFKEMRKSGFK-PDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVR 454
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRLT 311
E L++ A +RLE P +L+ G ++ + +L
Sbjct: 455 EDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLL 514
Query: 312 EA---NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
E N+ +Y + YA G+ ++ R+ KM + +
Sbjct: 515 EVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGL 552
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 8/145 (5%)
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ NV ++ S+ G I +A+ F + P+V WT +++GY G+ EA LF+
Sbjct: 64 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR 123
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
+ D N T+ ++ +R+ +++ K+F M + VV + ++D ++G
Sbjct: 124 V---DAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVV----SWNTMIDGYAQNGR 176
Query: 550 LHEAEEFIKDMPIELDAVVWGALLS 574
+ A + MP E + V W ++S
Sbjct: 177 IDSAMYLFEKMP-ERNVVSWNTVMS 200
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 194/664 (29%), Positives = 344/664 (51%), Gaps = 60/664 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
R +FD+M I+ VVSW ++L GY++ DE + L++ M V N TF+T+L A
Sbjct: 158 GRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALAD 217
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ + G Q+H +++K+G+E FV + L+ C
Sbjct: 218 ESIIEGGVQVHAMIVKNGFEFTTFVCNALI-----CM----------------------- 249
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
Y++ ++ DA VF M +D V W +I GYA ++ + ++F MR +G +
Sbjct: 250 ---YLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYA-AIGFYLEGFQMFHRMRLAGVKL- 304
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ F + ++ C++ K +H ++K G+EF + I AL+ Y C + D A +++
Sbjct: 305 SRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLF 364
Query: 277 DRLENPCLNASN--SLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA---- 326
+ + N ++I G + + A +F +++ N +Y++++ G
Sbjct: 365 S-MADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423
Query: 327 --VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME----------RNPVTWNSMISGYV 374
++ Q+ K +EK+P + L+ + +E ++ V W++M++G
Sbjct: 424 SQLHAQI--IKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLA 481
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC-LGSLQQGQLLHAHLVKTPFESNV 433
Q EKA+++++ + K + TFS + +ACS +++ G+ +HA VK+ + +
Sbjct: 482 QTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNAL 541
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
V ++L+ MYS+ G+I A+ F+ ++ +W +++ GY HG +A+ +F+IM Q
Sbjct: 542 CVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQ 601
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ + TF+GVL+AC AGLV EG K F M K Y + EHY+C+VDL R+G +
Sbjct: 602 GLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDK 661
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A + I MP +W LL+AC N+E+G+ AA+K+ L YV+LSNI+AV
Sbjct: 662 AMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAV 721
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTAN 672
G W +K +RK + +VKK+ GCSWIE+ +R+ +F D ++P +++YA LE L+
Sbjct: 722 AGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIK 781
Query: 673 LNSV 676
L +
Sbjct: 782 LKDM 785
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 160/648 (24%), Positives = 287/648 (44%), Gaps = 101/648 (15%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A LFD+ P++ + +N +L +S+ E+L L +H S + ++ T S L VC
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L + G+Q+HC LKSG+ VG+ L+ Y + E+ + +FDE+ N + W
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSW--- 173
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENM 215
T L+SGYA+ +G ++ + L M+ G N
Sbjct: 174 ----------------------------TSLLSGYAR--NGLNDEVIHLINQMQMEGVN- 202
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN +TF +V+ A A G VH +++K GFEF + ALI Y E A V
Sbjct: 203 PNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAV 262
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQV 331
+D + N +I G ++G + +F+R+ A + + + +K + ++
Sbjct: 263 FDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQREL 322
Query: 332 DDSKRL----------FEKMPHRSIISLNTMISVIPE---------MERNPVTWNSMISG 372
+ +K+L F + +++ + S + E N VTW +MI G
Sbjct: 323 NFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
+VQNN ++KA+ L+ M + + T+S + A L Q LHA ++K +E
Sbjct: 383 FVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL-AGKPSSLLSQ---LHAQIIKAYYEKV 438
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V T+L+D Y + G++ ++ F SI + ++ AW+A++ G + +A+ +F +++
Sbjct: 439 PSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVK 498
Query: 493 QDIVPNAATFVGVLSAC-VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
+ + PN TF V++AC A V G +I + G L + ++ + + G++
Sbjct: 499 EGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIE 558
Query: 552 EAE----------------------------------EFIKDMPIELDAVVWGALLSACW 577
AE + +++ + LD V + +L+AC
Sbjct: 559 SAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACT 618
Query: 578 FWMNMEVGERAAQKM---FGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
+E GE+ M + +DKK Y + ++Y+ G + K MDI
Sbjct: 619 HAGLVEEGEKYFNIMIKDYHIDKK-XEHYSCMVDLYSRAGMFDKAMDI 665
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 152/330 (46%), Gaps = 53/330 (16%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G +V + +F +P + +V+W+ ML G ++ ++++ + + + VK NE TFS+
Sbjct: 451 KTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSS 510
Query: 90 ILSVCAQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+++ C+ + ++ GKQIH +KSG V S LL Y+ IE A++VF E
Sbjct: 511 VINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEER 570
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ M+ GY Q G AK KAL++F+ M
Sbjct: 571 DIVSWNSMITGYGQ--------------------------HGDAK------KALEVFQIM 598
Query: 209 RESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG--GALIEFYCG 265
+ G +P ++ TF V+ AC G EG+ ++IK + D+ +++ Y
Sbjct: 599 QNQG--LPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK-DYHIDKKXEHYSCMVDLYSR 655
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLIS---------MGRIEDAELIFNRLTEANSI 316
FD AM + + + P AS ++ L++ +G++ +L+ L +++
Sbjct: 656 AGMFDKAMDIINGMPFP---ASPTIWRTLLAACRVHRNLELGKLAAEKLV--SLQPNDAV 710
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
Y + +AV G ++ + + M R +
Sbjct: 711 GYVLLSNIHAVAGNWEEKAHVRKLMDERKV 740
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 46/88 (52%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
+T + G + +A +F + R +VSWN+M+ GY + ++L + M + L++
Sbjct: 548 LTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDD 607
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLK 112
TF +L+ C + +G++ +++K
Sbjct: 608 VTFIGVLTACTHAGLVEEGEKYFNIMIK 635
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 204/697 (29%), Positives = 345/697 (49%), Gaps = 58/697 (8%)
Query: 23 KAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL 82
K ++ + G L AR +F +M R + +W+ M+ YS+ + E + M +
Sbjct: 124 KLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVP 183
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
+E IL C GK IH LV++ G V + +L YA C + A+R F
Sbjct: 184 DEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFF 243
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----------------------- 179
+ + + + W+ ++ GY Q + + +F KM ++
Sbjct: 244 ENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCD 303
Query: 180 ----------------DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
DV WT +ISG+A++ + +AL+LFR M +G PN T S
Sbjct: 304 DAMELMKKMESFRIVPDVFTWTSMISGFAQN-NRRSQALELFREMLLAGIE-PNGVTVTS 361
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
I ACA L A +G +H + +K G D +G +LI+ Y + A RV+D +
Sbjct: 362 GISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKD 421
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFE 339
+ NS+I G G A +F ++ E+ N +++N+MI GY G D + LF
Sbjct: 422 VYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFH 481
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+M +I +R+ +WNS+I+GY+QN KAL ++ M+ I
Sbjct: 482 RMEKDGLI------------KRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSV 529
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T + AC+ L + ++ + +H +++ S + V L+D Y++ G+I AQ F I
Sbjct: 530 TMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQGI 589
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
SS ++ +W +L+ GY HG A+ LF+ M + + P+ TF+ ++ A +G+V++G
Sbjct: 590 SSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKGK 649
Query: 520 KIFRS-MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
++F S M+ Y ++P LEH++ ++DLLGRSG L EA EFI+DM IE D+ +W ALL+A
Sbjct: 650 QVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLTASKI 709
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
N+ + RA + + L+ S + + +YA+ GK+ +RK E K+ GCS
Sbjct: 710 HGNIGLAIRAGECLLELEPSNFSIHQQILQMYALSGKFEDVSKLRKSEKRSETKQPLGCS 769
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
WIE + VH F +DR+ P + +++ +E++ + +
Sbjct: 770 WIEAKNIVHTFVADDRSRPYFDFLHSWIENVARKVKA 806
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 243/510 (47%), Gaps = 63/510 (12%)
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLV--LKSGYECFEFVGSGLLFFYANCFEI 135
SNVK N T+ +L C S G+++H + L+ E FV + L+ YA C +
Sbjct: 81 SNVKPN--TYMQLLQSCIDQGSAELGRKLHARIGLLE---EMNPFVETKLVSMYAKCGSL 135
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
EA++VF E+ E N WS M+ Y + + W +++
Sbjct: 136 GEARKVFGEMRERNLYAWSAMIGAYSREQM------------------WREVV------- 170
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+ F +M E G +P+E+ +++AC G GK++H L+I+CG F+ +
Sbjct: 171 -------QHFFFMMEDG-IVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRV 222
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT---- 311
+++ Y C A R ++ ++ + NS+I G G +E + +F ++
Sbjct: 223 SNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGI 282
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
E +++N +I Y+ G+ DD+ L +KM ++P++ TW SMIS
Sbjct: 283 EPGLVTWNILINSYSQSGKCDDAMELMKKM---------ESFRIVPDV----FTWTSMIS 329
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
G+ QNN +AL+L+ M I+ T + AC+ L +L++G LH+ VK
Sbjct: 330 GFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVE 389
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
++ VG SL+DMYS+ G + DA+ F I +V W +++ GY G +A LF M
Sbjct: 390 DLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMH 449
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP--TLEHYTCVVDLLGRSGH 549
E D+ PN T+ ++S ++ G ++ M +F M+ G++ T + + L ++GH
Sbjct: 450 ESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYL-QNGH 508
Query: 550 LHEAEEFIKDMP---IELDAVVWGALLSAC 576
++A + M I ++V ++L AC
Sbjct: 509 KNKALGIFRQMQSFCIRPNSVTMLSILPAC 538
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 180/376 (47%), Gaps = 52/376 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMP----IRTVVSWNTMLCGYSKWAKFDESLS 70
E +V+ N I ++G+ A L +M + V +W +M+ G+++ + ++L
Sbjct: 283 EPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQALE 342
Query: 71 LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE--FVGSGLLFF 128
L M + ++ N T ++ +S CA L +L G ++H + +K G C E VG+ L+
Sbjct: 343 LFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIG--CVEDLLVGNSLIDM 400
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD----VVVW 184
Y+ E+E+A+RVFD + + + W+ M+ GY Q A+D+FIKM + D VV W
Sbjct: 401 YSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTW 460
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESG-----------------EN------------- 214
+ISGY ++ D ++A+ LF M + G +N
Sbjct: 461 NAMISGYIQNGDE-DQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQM 519
Query: 215 -----MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
PN T S++ ACA L A + K +HG +++ + S+ LI+ Y
Sbjct: 520 QSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNI 579
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGY 325
A ++ + + + + NSLI G + G + A +F+++T + + ++ S+I +
Sbjct: 580 VYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAF 639
Query: 326 AVYGQVDDSKRLFEKM 341
++ G VD K++F M
Sbjct: 640 SLSGMVDKGKQVFSSM 655
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 197/641 (30%), Positives = 315/641 (49%), Gaps = 81/641 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +LF +P N +L +S+ + +LSL + R+ L+ +F +L ++
Sbjct: 68 ALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSK 127
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L++L G +IH L K G FF+A+ F + S +
Sbjct: 128 LSALNLGLEIHGLASKFG------------FFHADPF------------------IQSAL 157
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ Y C + DA +F KM +DVV W +I GY+++ + LKL+ M+ SG P
Sbjct: 158 IAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAH-YDHVLKLYEEMKTSGTE-P 215
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ +V+ ACA G GK +H + GF I +L+ Y C A A VY
Sbjct: 216 DAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVY 275
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
D+ L + + +M+ GYA G V D++
Sbjct: 276 DQ-------------------------------LPSKHMVVSTAMLSGYAKLGMVQDARF 304
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F++M +E++ V W++MISGY ++ +ALQL+ M++ I
Sbjct: 305 IFDRM-----------------VEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVP 347
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ T + AC+ +G+L Q + +H + K F + + +L+DMY++CG++ A+ F
Sbjct: 348 DQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVF 407
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
++ NV +W++++N ++ HG A+ LF M EQ+I PN TF+GVL AC AGLV
Sbjct: 408 ENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVE 467
Query: 517 EGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
EG K F SM + + P EHY C+VDL R+ HL +A E I+ MP + ++WG+L+SA
Sbjct: 468 EGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSA 527
Query: 576 CWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
C +E+GE AA ++ L+ A V+LSNIYA +W +RK + H V K+
Sbjct: 528 CQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEK 587
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
CS IE+N+ VH F + DR + + IY L+ + + L V
Sbjct: 588 ACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLV 628
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 199/399 (49%), Gaps = 21/399 (5%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G+++ AR LFD+M R VV+WN M+ GYS+ A +D L L M S + + T+L
Sbjct: 165 GRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVL 224
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S CA +L GK IH + +G+ + + L+ YANC + A+ V+D+L + +
Sbjct: 225 SACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMV 284
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+ + ML GY + ++ DA +F +M +KD+V W+ +ISGYA+S E AL+LF M+
Sbjct: 285 VSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLE-ALQLFNEMQRR 343
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+P++ T SVI ACA +GA + K +H K GF I ALI+ Y C
Sbjct: 344 -RIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVK 402
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAV 327
A V++ + + + +S+IN G + A +F+R+ E N +++ ++ +
Sbjct: 403 AREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSH 462
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V++ ++ F M + IS P+ E + M+ Y + N KA++L
Sbjct: 463 AGLVEEGQKFFSSMINEHRIS--------PQREH----YGCMVDLYCRANHLRKAMELIE 510
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
TM + L AC G ++ G+ L++
Sbjct: 511 TM---PFPPNVIIWGSLMSACQNHGEIELGEFAATRLLE 546
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 73/176 (41%), Gaps = 41/176 (23%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N I + G LV AR +F+ MP + V+SW++M+ ++ D +++L M N+
Sbjct: 387 NNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNI 446
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ N TF +L C+ +GL +EE ++
Sbjct: 447 EPNGVTFIGVLYACSH--------------------------AGL---------VEEGQK 471
Query: 141 VFDELHEDNEL-----LWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISG 190
F + ++ + + M+ Y + N + A ++ MP +V++W L+S
Sbjct: 472 FFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSA 527
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 282/507 (55%), Gaps = 21/507 (4%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
AF VF+ + D WT +I G+ ++ + EKAL+ + MR+ G + N++TF V++A
Sbjct: 79 AFWVFVGINYPDSYSWTTMIRGFVEAKNP-EKALEFYGLMRQRGVEL-NKFTFLFVLKAY 136
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
++ EG++VHG L+K GF +D ALI Y C + A ++D + N + N
Sbjct: 137 GLRPSYQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWN 196
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
++I G G E A +F + E N S+N+++ GY+ G VD ++ LF+ MP
Sbjct: 197 TMITGCFGCGDTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMP------ 250
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
ER+ V+W SMIS YVQN +AL+L+ M + + + AC
Sbjct: 251 -----------ERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIIITSILSAC 299
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ +G+L G+ +HA++ ++ ++V++ T+LVDMY++CG I+ A F+++ N+ +W
Sbjct: 300 AQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWN 359
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KS 527
A+++G + HG G A+ LF+ M + PN TFV VLSAC G V EG K F M K
Sbjct: 360 AMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKE 419
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
+ + P +EHY C+VD+L R G ++EA+E I+ MP+E + V+WGALL+AC VGE
Sbjct: 420 FNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGED 479
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV-KKDPGCSWIELNSRV 646
+ L + YV+LSNI+A +W + RK + + V KK PG S IEL+S V
Sbjct: 480 VVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIPGYSSIELDSVV 539
Query: 647 HAFSVEDRNNPNCNVIYATLEHLTANL 673
H F EDR + + +E L +L
Sbjct: 540 HDFFAEDRLHSKWREVSTVIERLNTHL 566
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 184/412 (44%), Gaps = 54/412 (13%)
Query: 51 SWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLV 110
SW TM+ G+ + +++L M + V+LN+ TF +L S +G+ +H +
Sbjct: 93 SWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKL 152
Query: 111 LKSGYECFE-FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLV----------- 158
+K G+ C++ F + L+ Y C I +A +FDE+ N + W+ M+
Sbjct: 153 VKVGF-CYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERA 211
Query: 159 --------------------GYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
GY + + A +F MP++DVV W +IS Y ++
Sbjct: 212 RRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAA 271
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
E AL+LF+ M +G + + S++ ACA++GA G+ +H + + D + A
Sbjct: 272 E-ALELFKEMMLAGVS-ADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTA 329
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----N 314
L++ Y C D A V++ + L + N++++GL G A +F ++ N
Sbjct: 330 LVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPN 389
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
I++ +++ + G V++ + F +M + ++ P++E + M+
Sbjct: 390 DITFVAVLSACSHIGSVEEGWKKFNQM--------DKEFNITPKVEH----YGCMVDILC 437
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+ L +A ++ +R + ++ + L +AC G G+ + ++ K
Sbjct: 438 RQGLINEAKEM---IRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQK 486
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 33/223 (14%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E + S N + + G + AR+LFD MP R VVSW +M+ Y + + E+L L
Sbjct: 220 ERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKE 279
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M + V + ++ILS CAQ+ +L G+ IH + +S F+ + L+ YA C
Sbjct: 280 MMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGC 339
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I+ A VF+ MP+K++ W ++SG A
Sbjct: 340 IDTAFGVFN-------------------------------TMPRKNLCSWNAMLSGLAIH 368
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
G AL+LF+ M +G PN+ TF +V+ AC+ +G+ EG
Sbjct: 369 GHGF-AALELFKQMESTGVG-PNDITFVAVLSACSHIGSVEEG 409
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 193/646 (29%), Positives = 324/646 (50%), Gaps = 50/646 (7%)
Query: 32 GQLVTARNLFDQMPIR---TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G + A+ +F+ PI ++ WN++L +E+L + M + V + TF
Sbjct: 80 GLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFP 139
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++ CA + S + +H V++ G++ VG+ L+ Y +++A++VF+ +
Sbjct: 140 LVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVR 199
Query: 149 NELLWSLMLVGYV---QCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVDGCEKALKL 204
+ + W+ M+ GY C+ S+ F + + ++V WT L+S +A+ E ++L
Sbjct: 200 SCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVE-TMEL 258
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F MR G E V+ L AF EGKV+HG ++K GFE
Sbjct: 259 FGRMRMRGIGATAE-ALAVVLSVSVDLAAFDEGKVIHGYVVKGGFE-------------- 303
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG 324
L NSLI G + A ++F + N +S+N++I
Sbjct: 304 -----------------NYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISS 346
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
YA G D++ +F ++ P + N V+W+++I G+ E+AL+
Sbjct: 347 YADLGWCDEAFAIFLQLEK---------TDEYPMVRPNVVSWSAVIGGFASKGQGEEALE 397
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
L+ M+ + T + + C+ L +L G+ +H H+V++ + N+ VG L++MY+
Sbjct: 398 LFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYT 457
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+ GS + F I + ++ +W ++ GY HGLG A+ F+ M++ P+ TFV
Sbjct: 458 KSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVA 517
Query: 505 VLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
VLSAC AGLV EG ++F M K + V P +EHY C+VDLLGR+G L EA + +K MP+E
Sbjct: 518 VLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVE 577
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
+A VWGALL++C N EV E A ++F L+ + +Y++LSNIYA G+W +R
Sbjct: 578 PNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVR 637
Query: 624 KRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+KK PG SWI++ +V+ FS + + +Y L+ L
Sbjct: 638 ISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDL 683
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 172/367 (46%), Gaps = 49/367 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGY---------------------- 59
N+ + G+ G++ AR +F++M +R+ VSWNTM+ GY
Sbjct: 174 NELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLE 233
Query: 60 -------------SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
++ + E++ L M + + +LSV L + +GK I
Sbjct: 234 PNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVI 293
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H V+K G+E + FV + L+ Y + A+ +F E+ N + W+ ++ Y
Sbjct: 294 HGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 353
Query: 167 SDAFDVFIKMPKKD--------VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
+AF +F+++ K D VV W+ +I G+A G E+AL+LFR M + + N
Sbjct: 354 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQG-EEALELFRRM-QLAKVKANS 411
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
T SV+ CA L A G+ +HG +++ + + +G LI Y +F V+++
Sbjct: 412 VTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEK 471
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDS 334
+EN L + N+++ G G E+A F+++ E + +++ +++ + G V +
Sbjct: 472 IENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEG 531
Query: 335 KRLFEKM 341
+ LF+KM
Sbjct: 532 RELFDKM 538
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 114/219 (52%), Gaps = 14/219 (6%)
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
YA +G V D++R+FE P E N + WNS++ V + E+AL+
Sbjct: 76 YAGFGLVSDAQRVFEVSP--------------IECFSNLLLWNSILRANVAHGYCEEALE 121
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
+Y MRKL + TF ++ AC+ +GS + + +H H+V+ F+ N++VG L+ MY
Sbjct: 122 IYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYG 181
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+ G ++DA+ F ++ + +W +++GY+ + A +F +M + PN T+
Sbjct: 182 KIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTS 241
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
+LS+ R G E M++F M+ G+ T E V+ +
Sbjct: 242 LLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSV 280
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 19/184 (10%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
F+ L CS QQ +H+ ++ T + ++ +V +Y+ G ++DAQ F
Sbjct: 37 FNDLLQQCSKSHLSQQ---IHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFE--V 91
Query: 461 SP-----NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
SP N+ W +++ HG EA+ ++ M + + + TF V+ AC G
Sbjct: 92 SPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMG-- 149
Query: 516 NEGMKIFRSMKSY----GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
K+ RS+ + G L ++ + G+ G + +A + + M + V W
Sbjct: 150 --SRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVR-SCVSWNT 206
Query: 572 LLSA 575
++S
Sbjct: 207 MVSG 210
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I+ N I ++G +F+++ + ++SWNTM+ GY + ++ M +
Sbjct: 446 ILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIK 505
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK--------SGYECF-EFVG-SGLLF 127
+ + TF +LS C+ + +G+++ ++K Y C + +G +GLL
Sbjct: 506 DGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLL- 564
Query: 128 FYANCFEIEEAKRVFDELH-EDNELLWSLML 157
+EA +V + E N +W +L
Sbjct: 565 --------QEASKVVKSMPVEPNACVWGALL 587
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 200/668 (29%), Positives = 352/668 (52%), Gaps = 58/668 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G +A +FD +P R +VS+ T++ G++ +F+E+ +L + ++N+ +T+L
Sbjct: 479 GPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVL 538
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ +++L +H K G++ FVGS L+ Y+
Sbjct: 539 KLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYS--------------------- 577
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
C ++SDA VF + KD V WT ++S Y+++ D E L++F MR +
Sbjct: 578 ----------MCGVVSDARRVFDGIVGKDAVAWTAMVSCYSEN-DCPENTLQIFSKMRVA 626
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+ N + SV+RA L + GK +H +K ++ + + GAL++ Y C +
Sbjct: 627 VSKL-NPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIED 685
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAV 327
A ++ + N + + +I+ + E A +F R+ + N S +S+++ A
Sbjct: 686 ARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACAN 745
Query: 328 YGQVDDSKRLFE---KMPHRSII----SLNTMISVIPEMER-----------NPVTWNSM 369
+D K++ K+ H S + +L + + +ME N V+WN++
Sbjct: 746 MPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTI 805
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
I GY ++ E AL ++ MR ++ T+ T+S + AC+ S+ +H + K+ F
Sbjct: 806 IVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTF 865
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
S+ V SL+D Y++CG I DA+ F ++ ++ +W A+++GY+ HG + A LF++
Sbjct: 866 NSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDM 925
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSG 548
M + I N TFV +LS C GLV++G+ +F SM+ +G+ P++EHYTC+V LLGR+G
Sbjct: 926 MSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAG 985
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L++A FI D+P A+VW ALLS+C N+E+G +A+K+ ++ + + YV+LSN
Sbjct: 986 RLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSN 1045
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+Y+ G + RK + ++ V+K+PG SW+E+ VHAFSV ++P VI A LE
Sbjct: 1046 MYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEW 1105
Query: 669 LTANLNSV 676
L NL ++
Sbjct: 1106 L--NLKAI 1111
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 173/410 (42%), Gaps = 83/410 (20%)
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ Y + +++ C G G+ VHG +++ G G A ++ +C
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSG-------GLARLDLFC------------ 467
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
+N L+N +G A +F+ L E N +S+ ++++G+A+ G+ +++
Sbjct: 468 ----------ANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASA 517
Query: 337 LFE--------------------------------------KMPH-------RSIISLNT 351
LF+ K+ H ++I +
Sbjct: 518 LFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYS 577
Query: 352 MISVIPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
M V+ + R + V W +M+S Y +N+ E LQ++ MR +
Sbjct: 578 MCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTS 637
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ A CL S+ G+ +HA VKT +++ +V +L+DMY++CG+I DA+ +F +++ +
Sbjct: 638 VLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDD 697
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V W+ +++ Y+ +A LF M+ + PN + VL AC L++ G +I
Sbjct: 698 VILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHN 757
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
G L ++DL + + + E + +++ V W ++
Sbjct: 758 HAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSL-RDVNEVSWNTII 806
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 125/294 (42%), Gaps = 30/294 (10%)
Query: 290 LINGLISMGRIEDAELIFNRLTEANSISY------NSMIKGYAVYGQVDDSKRLFEKMPH 343
L+ G ++ G + + + ++ N ++ Y G + R+F+ +P
Sbjct: 434 LLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLP- 492
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
ERN V++ +++ G+ E+A L+ +R + + +
Sbjct: 493 ----------------ERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTT 536
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ + +L +HA K + N +VG++L+D YS CG ++DA+ F I +
Sbjct: 537 VLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKD 596
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIM--LEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
AWTA+++ YS + + +F M + P A T V + C+ + ++ +G+
Sbjct: 597 AVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHA 656
Query: 522 FRSMKSYGVVPTLEH-YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
Y T H Y ++D+ + G++ +A +M D ++W ++S
Sbjct: 657 CSVKTLYD---TERHVYGALLDMYAKCGNIEDA-RLAFEMVTNDDVILWSLMIS 706
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
+ +N I + G + AR +F+ + +VSWN ++ GY+ + + L M ++
Sbjct: 870 IVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKN 929
Query: 79 NVKLNETTFSTILSVCAQLNSLIDG 103
++K N+ TF +LSVC + G
Sbjct: 930 SIKANDITFVALLSVCGSTGLVSQG 954
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 193/646 (29%), Positives = 324/646 (50%), Gaps = 50/646 (7%)
Query: 32 GQLVTARNLFDQMPIR---TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G + A+ +F+ PI ++ WN++L +E+L + M + V + TF
Sbjct: 80 GLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFP 139
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++ CA + S + +H V++ G++ VG+ L+ Y +++A++VF+ +
Sbjct: 140 LVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVR 199
Query: 149 NELLWSLMLVGYV---QCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVDGCEKALKL 204
+ + W+ M+ GY C+ S+ F + + ++V WT L+S +A+ E ++L
Sbjct: 200 SCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVE-TMEL 258
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F MR G E V+ L AF EGKV+HG ++K GFE
Sbjct: 259 FGRMRMRGIGATAE-ALAVVLSVSVDLAAFDEGKVIHGYVVKGGFE-------------- 303
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG 324
L NSLI G + A ++F + N +S+N++I
Sbjct: 304 -----------------NYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISS 346
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
YA G D++ +F ++ P + N V+W+++I G+ E+AL+
Sbjct: 347 YADLGWCDEAFAIFLQLEK---------TDEYPMVRPNVVSWSAVIGGFASKGQGEEALE 397
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
L+ M+ + T + + C+ L +L G+ +H H+V++ + N+ VG L++MY+
Sbjct: 398 LFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYT 457
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+ GS + F I + ++ +W ++ GY HGLG A+ F+ M++ P+ TFV
Sbjct: 458 KSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVA 517
Query: 505 VLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
VLSAC AGLV EG ++F M K + V P +EHY C+VDLLGR+G L EA + +K MP+E
Sbjct: 518 VLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVE 577
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
+A VWGALL++C N EV E A ++F L+ + +Y++LSNIYA G+W +R
Sbjct: 578 PNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVR 637
Query: 624 KRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+KK PG SWI++ +V+ FS + + +Y L+ L
Sbjct: 638 ISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDL 683
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 172/367 (46%), Gaps = 49/367 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGY---------------------- 59
N+ + G+ G++ AR +F++M +R+ VSWNTM+ GY
Sbjct: 174 NELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLE 233
Query: 60 -------------SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
++ + E++ L M + + +LSV L + +GK I
Sbjct: 234 PNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVI 293
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H V+K G+E + FV + L+ Y + A+ +F E+ N + W+ ++ Y
Sbjct: 294 HGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 353
Query: 167 SDAFDVFIKMPKKD--------VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
+AF +F+++ K D VV W+ +I G+A G E+AL+LFR M + + N
Sbjct: 354 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQG-EEALELFRRM-QLAKVKANS 411
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
T SV+ CA L A G+ +HG +++ + + +G LI Y +F V+++
Sbjct: 412 VTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEK 471
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDS 334
+EN L + N+++ G G E+A F+++ E + +++ +++ + G V +
Sbjct: 472 IENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEG 531
Query: 335 KRLFEKM 341
+ LF+KM
Sbjct: 532 RELFDKM 538
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 114/219 (52%), Gaps = 14/219 (6%)
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
YA +G V D++R+FE P E N + WNS++ V + E+AL+
Sbjct: 76 YAGFGLVSDAQRVFEVSP--------------IECFSNLLLWNSILRANVAHGYCEEALE 121
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
+Y MRKL + TF ++ AC+ +GS + + +H H+V+ F+ N++VG L+ MY
Sbjct: 122 IYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYG 181
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+ G ++DA+ F ++ + +W +++GY+ + A +F +M + PN T+
Sbjct: 182 KIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTS 241
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
+LS+ R G E M++F M+ G+ T E V+ +
Sbjct: 242 LLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSV 280
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 30/241 (12%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
F+ L CS Q +H+ ++ T + ++ +V +Y+ G ++DAQ F
Sbjct: 37 FNDLLQQCS---KSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFE--V 91
Query: 461 SP-----NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
SP N+ W +++ HG EA+ ++ M + + + TF V+ AC G
Sbjct: 92 SPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMG-- 149
Query: 516 NEGMKIFRSMKSY----GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
K+ RS+ + G L ++ + G+ G + +A + + M + V W
Sbjct: 150 --SRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVR-SCVSWNT 206
Query: 572 LLSACWFWMNMEVGERAAQKMF------GLDKKPISAYVILSNIYAVLGKWGKKMDIRKR 625
++S + +N + A +MF GL+ ++ +LS+ +A G+ + M++ R
Sbjct: 207 MVSG--YALNYDC--HGASEMFRMMGSAGLEPNLVTWTSLLSS-HARCGQHVETMELFGR 261
Query: 626 L 626
+
Sbjct: 262 M 262
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I+ N I ++G +F+++ + ++SWNTM+ GY + ++ M +
Sbjct: 446 ILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIK 505
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK--------SGYECF-EFVG-SGLLF 127
+ + TF +LS C+ + +G+++ ++K Y C + +G +GLL
Sbjct: 506 DGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLL- 564
Query: 128 FYANCFEIEEAKRVFDELH-EDNELLWSLML 157
+EA +V + E N +W +L
Sbjct: 565 --------QEASKVVKSMPVEPNACVWGALL 587
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 199/665 (29%), Positives = 337/665 (50%), Gaps = 63/665 (9%)
Query: 37 ARNLFDQMPIRTVVS-WNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFSTILSVC 94
A+ +FD M +S WN ++ GY+K + E+L L + H +K + T+ ++ C
Sbjct: 57 AKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKAC 116
Query: 95 AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
L+ + GK IH ++K+G VGS L+ Y C E+A +F+E+ E + W+
Sbjct: 117 GGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWN 176
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN 214
++ Y Q D AL+ F MR G
Sbjct: 177 TVISCYYQSGNFKD--------------------------------ALEYFGLMRRFGFE 204
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
PN T + I +CARL G +H LI GF D I AL++ Y C + A+
Sbjct: 205 -PNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIE 263
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNR---------LTEANSI-----SYNS 320
+++++ + A NS+I+G G I +F R LT +S+
Sbjct: 264 IFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSAR 323
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISL----------NTMISVIPEMERNPVTWNSMI 370
+++G V+G ++ + + S++ L + +IP + V+WN MI
Sbjct: 324 LLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIP--KSKVVSWNVMI 381
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
SGYV +AL L+ MRK ++ TF+ + ACS L +L++G+ +H +++ +
Sbjct: 382 SGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLD 441
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+N V +L+DMY++CG++++A + F + ++ +WT+++ Y HG A+ LF M
Sbjct: 442 NNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEM 501
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGH 549
L+ ++ P+ F+ +LSAC AGLV+EG F M YG++P +EHY+C++DLLGR+G
Sbjct: 502 LQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGR 561
Query: 550 LHEAEEFIKDMP-IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
LHEA E ++ P I D + L SAC N+++G A+ + D S Y++LSN
Sbjct: 562 LHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSN 621
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YA KW + +R ++ L +KK+PGCSWIE+N ++ F VED ++ + +++ L +
Sbjct: 622 MYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSY 681
Query: 669 LTANL 673
L+ ++
Sbjct: 682 LSDHM 686
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/508 (25%), Positives = 228/508 (44%), Gaps = 54/508 (10%)
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C SL GK IH V+ G + F+ L+ Y +C + AK VFD +
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
E + +W L++GY K+ E AL+LF +
Sbjct: 69 E------------------------------ISLWNGLMAGYTKNYMYVE-ALELFEKLL 97
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P+ YT+ SV +AC L + GK++H LIK G D +G +L+ Y C AF
Sbjct: 98 HYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAF 157
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMI--- 322
+ A+ +++ + + N++I+ G +DA F + E NS++ + I
Sbjct: 158 EKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSC 217
Query: 323 -------KGYAVYGQVDDSKRLFEKMPHRSIIS-------LNTMISVIPEM-ERNPVTWN 367
+G ++ ++ +S L + +++ L I + +M ++ V WN
Sbjct: 218 ARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWN 277
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
SMISGY +QL+ M + T +T S L CS L +G+ +H + ++
Sbjct: 278 SMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRN 337
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ +V+V +SL+D+Y +CG + A+ F I V +W +++GY G EA+ LF
Sbjct: 338 RIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLF 397
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
M + + +A TF VL+AC + + +G +I + + ++D+ +
Sbjct: 398 SEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKC 457
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + EA K +P + D V W ++++A
Sbjct: 458 GAVDEAFSVFKCLP-KRDLVSWTSMITA 484
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 193/421 (45%), Gaps = 54/421 (12%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L A +F+QMP +TVV+WN+M+ GY + L M+ VK TT S
Sbjct: 253 GKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLS 312
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+++ VC++ L++GK +H +++ + FV S L+ Y C ++E A+++F + +
Sbjct: 313 SLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKS 372
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ W++M+ GYV + +A +F +M K Y +S
Sbjct: 373 KVVSWNVMISGYVAEGKLFEALGLFSEMRK-----------SYVES-------------- 407
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ TF SV+ AC++L A +GK +H L+I+ + +E + GAL++ Y C A
Sbjct: 408 --------DAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGA 459
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIKG 324
D A V+ L L + S+I S G A +F + ++N +++ +++
Sbjct: 460 VDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSA 519
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
G VD+ F +M + + +IP +E + + LHE A +
Sbjct: 520 CGHAGLVDEGCYYFNQMIN--------VYGIIPRVEHYSCLIDLLGRA---GRLHE-AYE 567
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMY 443
+ ++ D S LF AC ++ G + L+ K P +S+ Y+ L +MY
Sbjct: 568 ILQQNPEIRDD--VELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYI--LLSNMY 623
Query: 444 S 444
+
Sbjct: 624 A 624
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 212/689 (30%), Positives = 335/689 (48%), Gaps = 101/689 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST-MHRSNVKLNETTFSTI 90
G + AR FD + R V +WN M+ GY + E + S M S ++ + TF ++
Sbjct: 100 GNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSV 159
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L C ++ DG +IHCL LK G+ +V + L+ Y + A+ +FDE
Sbjct: 160 LKAC---RNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDE------ 210
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
MP +D+ W +ISGY +S + E AL L
Sbjct: 211 -------------------------MPTRDMGSWNAMISGYCQSGNAKE-ALTL-----S 239
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G + T S++ AC G F G +H IK G E + + LI+ Y +
Sbjct: 240 DGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLK 299
Query: 271 GAMRVYDRLENPCLNASNSLINGL---------------ISMGRIEDAEL-------IFN 308
+V+DR+ L + NS+I + + RI+ L I +
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILS 359
Query: 309 RLTEANSISY------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
+L E + N+++ YA G VD ++ +F +P++ +IS
Sbjct: 360 QLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVIS-- 417
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA--IDRTRSTFSVLFHAC 408
WN++ISGY QN +A+++Y M + I + T+ + AC
Sbjct: 418 ---------------WNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPAC 462
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
S G+L+QG LH L+K +V+VGTSL DMY +CG ++DA + F I N W
Sbjct: 463 SQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWN 522
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS- 527
L+ + HG G +AV+LF+ ML++ + P+ TFV +LSAC +GLV+EG F M++
Sbjct: 523 TLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTD 582
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
YG+ P+L+HY C+VDL GR+G L A FIK MP++ DA +WGALLSAC N+++G+
Sbjct: 583 YGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKI 642
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVH 647
A++ +F ++ + + +V+LSN+YA GKW +IR + ++K PG S +E++++V
Sbjct: 643 ASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVE 702
Query: 648 AFSVEDRNNPNCNVIYATLEHLTANLNSV 676
F ++ +P +Y L L L V
Sbjct: 703 VFYTGNQTHPMYEEMYRELTALHEKLKMV 731
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 225/528 (42%), Gaps = 72/528 (13%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G +V AR LFD+MP R + SWN M+ GY + E+L+L + ++ T +
Sbjct: 197 RYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR----AMDSVTVVS 252
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C + G IH +K G E FV + L+ YA +++ ++VFD
Sbjct: 253 LLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFD------ 306
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+M +D++ W +I Y + + +A+ LF+ MR
Sbjct: 307 -------------------------RMYVRDLISWNSIIKAYELN-EQPLRAILLFQEMR 340
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGALIEFYCGCEA 268
S P+ T S+ ++LG + V G ++ G F D +IG A++ Y
Sbjct: 341 LS-RIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL 399
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE------ANSISYNSMI 322
D A V++ L N + + N++I+G G +A ++N + E AN ++ S++
Sbjct: 400 VDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVL 459
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSII-----------------SLNTMISVIPEMER-NPV 364
+ G + +L ++ + L+ +S+ ++ R N V
Sbjct: 460 PACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSV 519
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG----QLL 420
WN++I+ + + EKA+ L+ M + TF L ACS G + +G +++
Sbjct: 520 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMM 579
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGL 479
TP S + G +VD+Y R G + A S+ P+ + W AL++ HG
Sbjct: 580 QTDYGITP--SLKHYGC-MVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGN 636
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
+ E + E + P + +LS + EG+ RS+ S
Sbjct: 637 VDLGKIASEHLFE--VEPEHVGYHVLLSNMYASAGKWEGVDEIRSITS 682
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 195/440 (44%), Gaps = 56/440 (12%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + +NK I G L + +FD+M +R ++SWN+++ Y + ++ L
Sbjct: 279 ESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQE 338
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCF 133
M S ++ + T ++ S+ +QL + + + L+ G+ + +G+ ++ YA
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++ A+ VF+ L + + W+ ++ GY Q S+A +++ M +
Sbjct: 399 LVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEE--------------- 443
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
E GE N+ T+ SV+ AC++ GA +G +HG L+K G D
Sbjct: 444 ----------------EGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 487
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRL- 310
+G +L + Y C D A+ ++ ++ P +N+ N+LI G E A ++F +
Sbjct: 488 FVGTSLADMYGKCGRLDDALSLFYQI--PRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 545
Query: 311 ---TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
+ + I++ +++ + G VD+ + FE M T + P ++ +
Sbjct: 546 DEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMM--------QTDYGITPSLKH----YG 593
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
M+ Y + E AL ++ + + S + L AC G++ G++ HL +
Sbjct: 594 CMVDLYGRAGQLEIALNF---IKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 650
Query: 428 PFESNVYVGTSLVDMYSRCG 447
E +V L +MY+ G
Sbjct: 651 EPE-HVGYHVLLSNMYASAG 669
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 199/668 (29%), Positives = 339/668 (50%), Gaps = 58/668 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G + A +F+ + + V ++TML G++K + D++L M +V+ F+
Sbjct: 81 RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY 140
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L VC L GK+IH L++KSG+ F +GL YA C ++ EA++VFD + E +
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ ++ GY Q + A ++ M CE+ LK
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSM---------------------CEENLK------ 233
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P+ T SV+ A + L GK +HG ++ GF+ +I AL++ Y C +
Sbjct: 234 ------PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL 287
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
+ A +++D + + + NS+I+ + ++A LIF ++ + + + G A++
Sbjct: 288 ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG-ALHA 346
Query: 330 QVD----DSKRLFEKMP-----HRSIISLNTMISVIPE--------------MERNPVTW 366
D + R K+ R++ +N++IS+ + R V+W
Sbjct: 347 CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW 406
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N+MI G+ QN AL + MR + T+ + A + L + +H +++
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ + NV+V T+LVDMY++CG+I A+ F +S +V W A+++GY HG G A+ L
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALEL 526
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLG 545
FE M + I PN TF+ V+SAC +GLV G+K F MK +Y + +++HY +VDLLG
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLG 586
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G L+EA +FI MP++ V+GA+L AC N+ E+AA+++F L+ +V+
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVL 646
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
L+NIY W K +R + ++K PGCS +E+ + VH+F +P+ IYA
Sbjct: 647 LANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAF 706
Query: 666 LEHLTANL 673
LE L ++
Sbjct: 707 LEKLICHI 714
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 214/518 (41%), Gaps = 67/518 (12%)
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
E + +L C+ L L +QI LV K+G F + L+ + ++EA RVF+
Sbjct: 37 EHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFE 93
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ +L+ ML G+ + + + A F++M DV
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV---------------------- 131
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
P Y F +++ C GK +HGLL+K GF D L Y
Sbjct: 132 -----------EPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMY 180
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN--------- 314
C + A +V+DR+ L + N+++ G G A + + E N
Sbjct: 181 AKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIV 240
Query: 315 ----------SISYNSMIKGYAVYGQVDDSKRLFEKMP--HRSIISLNTMISVIPEM-ER 361
IS I GYA+ D + + + SL T + M ER
Sbjct: 241 SVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER 300
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
N V+WNSMI YVQN ++A+ ++ M + T + HAC+ LG L++G+ +H
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
V+ + NV V SL+ MY +C ++ A + F + S + +W A++ G++ +G
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI 420
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI----FRSMKSYGVVPTLEHY 537
+A+ F M + + P+ T+V V++A + + I RS V T
Sbjct: 421 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT---- 476
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
T +VD+ + G + A I DM E W A++
Sbjct: 477 TALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDG 513
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/632 (29%), Positives = 326/632 (51%), Gaps = 55/632 (8%)
Query: 43 QMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLID 102
Q P T + L S + E+LS + + + ++L F +L +CA+
Sbjct: 21 QRPDSTGLCIAQSLLDLSSQGRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKG 80
Query: 103 GKQIHCLVLKSGYE-CFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYV 161
GK +H + +G++ V + L+ Y C EA++VFD++ N W+ ML GY
Sbjct: 81 GKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYA 140
Query: 162 QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYT 220
+ +++A +F +M +KDVV W ++ YAK GC +A+ L+R R N ++
Sbjct: 141 KLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQ--GCFNEAIGLYRDFRRLDMGF-NAFS 197
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
F V+ C +L K VHG ++ GF + + ++++ Y C G MR
Sbjct: 198 FAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKC----GEMRC----- 248
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
A +F+ + + ++ +++ GYA +G ++ + LF +
Sbjct: 249 ----------------------ARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQ 286
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
MP E+NPV+W+++ISGY +N+L +AL + M K I+ + T
Sbjct: 287 MP-----------------EKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYT 329
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
FS AC+ + +L+ G+ +H +L++T F N V +SL+DMYS+CG + + F +
Sbjct: 330 FSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMG 389
Query: 461 SP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+ +V W +++ + +G G +A+ +F M+E + P+ TF+ +LSAC +GLV EG+
Sbjct: 390 NKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGL 449
Query: 520 KIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
+ F++M +GV P EHY C++DLLGR+G E +++M + D VW ALL C
Sbjct: 450 RFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRI 509
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
N+E+G + A+++ L + +AYV L+++YA LGKW +R+ + ++K+ G S
Sbjct: 510 HNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGIS 569
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
WI++ ++ H+F DR +P IY LE L
Sbjct: 570 WIDVGNKTHSFIASDRLHPLKEEIYLLLEQLA 601
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 177/331 (53%), Gaps = 7/331 (2%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N + + G + AR LFD+M + VVSWNT++ Y+K F+E++ L R
Sbjct: 129 LYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRR 188
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ N +F+ +L +C +L L KQ+H VL +G+ + S ++ Y+ C E+
Sbjct: 189 LDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRC 248
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ +FDE+ + W+ ++ GY + M+ A ++F +MP+K+ V W+ LISGYA++ G
Sbjct: 249 ARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLG 308
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E AL F M + G N P +YTF S + ACA + A GK VHG LI+ F + +
Sbjct: 309 HE-ALDYFTKMMKFGIN-PEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVS 366
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPC-LNASNSLINGLISMGRIEDAELIFNRLTEA--- 313
+LI+ Y C + + V+ + N + N++I+ L G E A +FN + E+
Sbjct: 367 SLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLK 426
Query: 314 -NSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+ I++ ++ + G V + R F+ M +
Sbjct: 427 PDRITFIVILSACSHSGLVQEGLRFFKAMTY 457
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 199/645 (30%), Positives = 325/645 (50%), Gaps = 87/645 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES-LSLVSTMHRSNVKLNETTFSTILSVCA 95
AR +FDQ+P + SWN ++ + + +S L + +H S N+ TF ++ A
Sbjct: 192 ARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVA 251
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL--W 153
+ + GK +H + +K+ + FV + L+ FYA+C ++ A VF+ + +N+ + W
Sbjct: 252 ERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSW 311
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ M+ G+VQ GY +KAL LF MR G
Sbjct: 312 NSMVTGFVQ--------------------------GGYP------DKALDLFERMRNEGV 339
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
+ PN T SV+ ACA+ G+ V C+ D
Sbjct: 340 H-PNAVTMVSVMSACAKTMNLTLGRKV-------------------------CDYIDRNE 373
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
+ + LN N+ I+ + G +E A +F+ + + + +S+ ++I GYA +
Sbjct: 374 MMMN------LNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGI 427
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY--MTMRK 391
++ +F+ MP + I + WN +ISGY Q+ ++AL ++ + + K
Sbjct: 428 ARDIFDSMPRKDIPA-----------------WNVLISGYEQSGRPKEALAIFRELQLTK 470
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+ T AC+ LG++ G+ +H ++ K + N + TSL+DMYS+ G +
Sbjct: 471 SGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEK 530
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A F SI + +V W+A++ G + HG G A+ LF M E + PN+ TF +L AC
Sbjct: 531 AIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSH 590
Query: 512 AGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
+GLV+EG ++F M + YGVVP +HY+C+VD+LGR+GHL EA +FI+ MP+ A VWG
Sbjct: 591 SGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWG 650
Query: 571 ALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630
ALL AC N+E+ E+A ++ ++ AYV+LSN+YA G W ++R+++
Sbjct: 651 ALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSG 710
Query: 631 VKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
+KK+ GCS IE++ VH F V D +P IYA L+ + A L S
Sbjct: 711 LKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRS 755
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/646 (29%), Positives = 324/646 (50%), Gaps = 50/646 (7%)
Query: 32 GQLVTARNLFDQMPIR---TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G + A+ +F+ PI ++ WN++L +E+L + M + V + TF
Sbjct: 918 GLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFP 977
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++ CA + S + +H V++ G++ VG+ L+ Y +++A++VF+ +
Sbjct: 978 LVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVR 1037
Query: 149 NELLWSLMLVGYV---QCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVDGCEKALKL 204
+ + W+ M+ GY C+ S+ F + + ++V WT L+S +A+ E ++L
Sbjct: 1038 SCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVE-TMEL 1096
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F MR G E V+ L AF EGKV+HG ++K GFE
Sbjct: 1097 FGRMRMRGIGATAE-ALAVVLSVSVDLAAFDEGKVIHGYVVKGGFE-------------- 1141
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG 324
L NSLI G + A ++F + N +S+N++I
Sbjct: 1142 -----------------NYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISS 1184
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
YA G D++ +F ++ P + N V+W+++I G+ E+AL+
Sbjct: 1185 YADLGWCDEAFAIFLQLEK---------TDEYPMVRPNVVSWSAVIGGFASKGQGEEALE 1235
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
L+ M+ + T + + C+ L +L G+ +H H+V++ + N+ VG L++MY+
Sbjct: 1236 LFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYT 1295
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+ GS + F I + ++ +W ++ GY HGLG A+ F+ M++ P+ TFV
Sbjct: 1296 KSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVA 1355
Query: 505 VLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
VLSAC AGLV EG ++F M K + V P +EHY C+VDLLGR+G L EA + +K MP+E
Sbjct: 1356 VLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVE 1415
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
+A VWGALL++C N EV E A ++F L+ + +Y++LSNIYA G+W +R
Sbjct: 1416 PNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVR 1475
Query: 624 KRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+KK PG SWI++ +V+ FS + + +Y L+ L
Sbjct: 1476 ISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDL 1521
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 169/360 (46%), Gaps = 49/360 (13%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGY----------------------------- 59
G+ G++ AR +F++M +R+ VSWNTM+ GY
Sbjct: 1019 GKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWT 1078
Query: 60 ------SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS 113
++ + E++ L M + + +LSV L + +GK IH V+K
Sbjct: 1079 SLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKG 1138
Query: 114 GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
G+E + FV + L+ Y + A+ +F E+ N + W+ ++ Y +AF +F
Sbjct: 1139 GFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIF 1198
Query: 174 IKMPKKD--------VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
+++ K D VV W+ +I G+A G E+AL+LFR M + + N T SV+
Sbjct: 1199 LQLEKTDEYPMVRPNVVSWSAVIGGFASKGQG-EEALELFRRM-QLAKVKANSVTIASVL 1256
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
CA L A G+ +HG +++ + + +G LI Y +F V++++EN L
Sbjct: 1257 SVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLI 1316
Query: 286 ASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ N+++ G G E+A F+++ E + +++ +++ + G V + + LF+KM
Sbjct: 1317 SWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKM 1376
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 114/219 (52%), Gaps = 14/219 (6%)
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
YA +G V D++R+FE P E N + WNS++ V + E+AL+
Sbjct: 914 YAGFGLVSDAQRVFEVSP--------------IECFSNLLLWNSILRANVAHGYCEEALE 959
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
+Y MRKL + TF ++ AC+ +GS + + +H H+V+ F+ N++VG L+ MY
Sbjct: 960 IYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYG 1019
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+ G ++DA+ F ++ + +W +++GY+ + A +F +M + PN T+
Sbjct: 1020 KIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTS 1079
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
+LS+ R G E M++F M+ G+ T E V+ +
Sbjct: 1080 LLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSV 1118
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 129/319 (40%), Gaps = 35/319 (10%)
Query: 270 DGAMRVYDRLENPCLN----ASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
DGA+ + LE LN A+ + ++ G I+ +++ L +A S+S
Sbjct: 752 DGALVLGKLLEQDDLNLGYDAAKGVYVDMVKAGIIDPLKVVRTALVDAASVSLLLTTTEA 811
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
V D+ +MP +++ M S P M + +IS NL +
Sbjct: 812 TVVDHPDEKNSAPSRMP-----AMDDMASE-PSMLHG--SSRRLISISFLPNLSRSISII 863
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ +D F+ L CS QQ +H+ ++ T + ++ +V +Y+
Sbjct: 864 HHQPNNDVLD----FFNDLLQQCSKSHLSQQ---IHSQIIVTGSHRSAFLAARVVSVYAG 916
Query: 446 CGSINDAQASFSSISSP-----NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
G ++DAQ F SP N+ W +++ HG EA+ ++ M + + +
Sbjct: 917 FGLVSDAQRVFE--VSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGF 974
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSY----GVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
TF V+ AC G K+ RS+ + G L ++ + G+ G + +A +
Sbjct: 975 TFPLVIRACALMG----SRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKV 1030
Query: 557 IKDMPIELDAVVWGALLSA 575
+ M + V W ++S
Sbjct: 1031 FERMAVR-SCVSWNTMVSG 1048
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I+ N I ++G +F+++ + ++SWNTM+ GY + ++ M +
Sbjct: 1284 ILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIK 1343
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK--------SGYECF-EFVG-SGLLF 127
+ + TF +LS C+ + +G+++ ++K Y C + +G +GLL
Sbjct: 1344 DGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLL- 1402
Query: 128 FYANCFEIEEAKRVFDELH-EDNELLWSLML 157
+EA +V + E N +W +L
Sbjct: 1403 --------QEASKVVKSMPVEPNACVWGALL 1425
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 200/682 (29%), Positives = 333/682 (48%), Gaps = 57/682 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N ++ G+ G L AR +F + R VVS+NTML Y++ A E L L M +
Sbjct: 167 NSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGIS 226
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ T+ +L + L +GK+IH L ++ G VG+ L+ C +++ AK+
Sbjct: 227 PDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQA 286
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F + + +DVVV+ LI+ A+ E
Sbjct: 287 FKGIAD-------------------------------RDVVVYNALIAALAQHGHNVEAF 315
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+ +R MR G + N T+ S++ AC+ A GK++H + + G D IG ALI
Sbjct: 316 EQYYR-MRSDGVAL-NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALIS 373
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSIS 317
Y C A ++ + L + N++I G +A ++ ++ + ++
Sbjct: 374 MYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVT 433
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ 359
+ ++ A D K + E + I S + + + M
Sbjct: 434 FLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQ 493
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
R+ ++WNSMI+G+ Q+ +E A +L+ M+ ++ TF+ + C +L+ G+
Sbjct: 494 ARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQ 553
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+H + ++ + +V +G +L++MY RCGS+ DA+ F S+ +V +WTA++ G + G
Sbjct: 554 IHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGE 613
Query: 480 GSEAVLLFEIMLEQDI-VPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHY 537
+A+ LF M + P+ +TF +LSAC AGLV EG +IF SM+S YGV+PT+EHY
Sbjct: 614 DMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHY 673
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
C+V LLGR+ EAE I MP DA VW LL AC N+ + E AA L+
Sbjct: 674 GCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNA 733
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+ + Y++LSN+YA G+W IR+ + ++K+PG SWIE+++ +H F DR++P
Sbjct: 734 RNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHP 793
Query: 658 NCNVIYATLEHLTANLNSVVLF 679
IYA L+ L+ + F
Sbjct: 794 ETAEIYAELKRLSVEMEEAGYF 815
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/571 (23%), Positives = 274/571 (47%), Gaps = 55/571 (9%)
Query: 135 IEEAKRVFDELHE----DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
+ EAKR+ ++ E + L +L++ YV+C + DA VF +MP++DV+ W LIS
Sbjct: 43 LPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISC 102
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
YA+ +KA +LF M+ +G +PN+ T+ S++ AC GK +H +IK G++
Sbjct: 103 YAQQ-GFKKKAFQLFEEMQNAG-FIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQ 160
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
D + +L+ Y C A +V+ + + + N+++ +++ +F ++
Sbjct: 161 RDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQM 220
Query: 311 T----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII--SLNTMISVIPEM----- 359
+ + ++Y +++ + +D+ KR+ H+ + LN+ I V +
Sbjct: 221 SSEGISPDKVTYINLLDAFTTPSMLDEGKRI-----HKLTVEEGLNSDIRVGTALVTMCV 275
Query: 360 ----------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
+R+ V +N++I+ Q+ + +A + Y MR + R+T+
Sbjct: 276 RCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLS 335
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ +ACS +L+ G+L+H+H+ + S+V +G +L+ MY+RCG + A+ F ++ +
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+ +W A++ GY+ EA+ L++ M + + P TF+ +LSAC + +G I
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
+ G+ ++++ R G L EA+ + D + W ++++ + E
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYE 514
Query: 584 VGERAAQKMFGLDKKP--ISAYVILS---NIYAV-LGKWGKKMDIRKRLTHLEVKKDPGC 637
+ Q+M + +P I+ +LS N A+ LGK I R+T ++ D
Sbjct: 515 TAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGK-----QIHGRITESGLQLDVNL 569
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+N + S++D N ++ +L+H
Sbjct: 570 GNALINMYIRCGSLQDARN-----VFHSLQH 595
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 170/378 (44%), Gaps = 23/378 (6%)
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T+ ++++ C R E K +H +++ G D + LI Y C + A +V+ +
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSK 335
+ + NSLI+ G + A +F + A N I+Y S++ ++++ K
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 336 RL--------FEKMP--HRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQNN 377
++ +++ P S++S+ +P R+ V++N+M+ Y Q
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
++ L L+ M I + T+ L A + L +G+ +H V+ S++ VGT
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+LV M RCG ++ A+ +F I+ +V + AL+ + HG EA + M +
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
N T++ +L+AC + + G I + G ++ ++ + R G L +A E
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELF 388
Query: 558 KDMPIELDAVVWGALLSA 575
MP + D + W A+++
Sbjct: 389 YTMP-KRDLISWNAIIAG 405
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 172/423 (40%), Gaps = 73/423 (17%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G L+ A+N+F+ R V+SWN+M+ G+++ ++ + L M ++ + TF++
Sbjct: 478 RCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFAS 537
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C +L GKQIH + +SG + +G+ L+ Y C +++A+ VF L
Sbjct: 538 VLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQH-- 595
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+DV+ WT +I G A + KA++LF M+
Sbjct: 596 -----------------------------RDVMSWTAMIGGCADQGEDM-KAIELFWQMQ 625
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL--IEFYCGCE 267
G P+ TF S++ AC G EG + F ES G L IE Y
Sbjct: 626 NEGFRPPDGSTFTSILSACNHAGLVLEGYQI--------FSSMESEYGVLPTIEHYGCLV 677
Query: 268 AFDGAMRVYDRLEN--------PCLNASNSLINGLISMGRIEDAELIFN---RLTEANSI 316
G R + E P +L+ G I AE N +L N
Sbjct: 678 GLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPA 737
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV-Q 375
Y + YA G+ DD ++ M R I E R+ + +++I ++
Sbjct: 738 VYILLSNVYAAAGRWDDVAKIRRVMEGRGIRK---------EPGRSWIEVDNIIHEFIAA 788
Query: 376 NNLHEKALQLYMTMRKLAIDRTRST-FSVLFHACSCLGSLQQGQLLHAH---------LV 425
+ H + ++Y +++L+++ + F H LG Q L H L+
Sbjct: 789 DRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLI 848
Query: 426 KTP 428
KTP
Sbjct: 849 KTP 851
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 1/186 (0%)
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
T + + R+T+ L C+ L + + +HA +V+ ++++ L++MY +C
Sbjct: 17 THQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCR 76
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
S+ DA F + +V +W +L++ Y+ G +A LFE M +PN T++ +L+
Sbjct: 77 SVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILT 136
Query: 508 ACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
AC + G KI + G ++ + G+ G L A + + D V
Sbjct: 137 ACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPR-DVV 195
Query: 568 VWGALL 573
+ +L
Sbjct: 196 SYNTML 201
>gi|15229753|ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g50420
gi|6561982|emb|CAB62471.1| putative protein [Arabidopsis thaliana]
gi|332645144|gb|AEE78665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 794
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 200/667 (29%), Positives = 341/667 (51%), Gaps = 65/667 (9%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDE-SLSLVSTMHRS 78
+ N I+ R G L AR +FD+MP R VVS+N + YS+ F + L + M
Sbjct: 134 ANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFE 193
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
VK N +TF++++ VCA L ++ G ++ ++K GY V + +L Y++C ++E A
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+R+ FD + +D V W +I G K+ D
Sbjct: 254 RRI----------------------------FDC---VNNRDAVAWNTMIVGSLKN-DKI 281
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
E L FR M SG + P ++T+ V+ C++LG++ GK++H +I D + A
Sbjct: 282 EDGLMFFRNMLMSGVD-PTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNA 340
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
L++ YC C A V+ R+ NP L + NS+I+G G E A L++ RL ++
Sbjct: 341 LLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRP 400
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPH---------RSIISLNTMISVIPE----------- 358
+ A+ + + + K+ H RS+ T++S+ +
Sbjct: 401 DEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVF 460
Query: 359 ---MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACSCLG 412
ER+ V W MI G+ + E A+Q ++ M + ++ RS + S + ACS +
Sbjct: 461 DVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYR---EKNRSDGFSLSSVIGACSDMA 517
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
L+QG++ H ++T F+ + V +LVDMY + G A+ FS S+P++ W +++
Sbjct: 518 MLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLG 577
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
YS HG+ +A+ FE +LE +P+A T++ +L+AC G +G ++ MK G+
Sbjct: 578 AYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKA 637
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPI-ELDAVVWGALLSACWFWMNMEVGERAAQK 591
+HY+C+V+L+ ++G + EA E I+ P A +W LLSAC N+++G AA++
Sbjct: 638 GFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQ 697
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL-NSRVHAFS 650
+ LD + + +++LSN+YAV G+W ++R+++ L KDPG SWIE+ N+ FS
Sbjct: 698 ILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFS 757
Query: 651 VEDRNNP 657
D++NP
Sbjct: 758 SGDQSNP 764
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 156/603 (25%), Positives = 258/603 (42%), Gaps = 95/603 (15%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
+ N I+ R L AR +FD+MP R +V+ L G S A F E +S+ S++H
Sbjct: 24 ANNNLISMYVRCSSLEQARKVFDKMPQRNIVT----LFGLS--AVF-EYVSMGSSLHSQI 76
Query: 80 VKL-----------NETTFSTI--LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
+KL NE S + C + L +QIH LVL +G G+
Sbjct: 77 IKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAG------AGAATE 130
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
YAN N L+ YV+C + A VF KMP ++VV +
Sbjct: 131 SPYAN-----------------NNLISM-----YVRCGSLEQARKVFDKMPHRNVVSYNA 168
Query: 187 LISGYAKSVDGCEKALKL-----FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
L S Y+++ D A L F +++ PN TF S+++ CA L G ++
Sbjct: 169 LYSAYSRNPDFASYAFPLTTHMAFEYVK------PNSSTFTSLVQVCAVLEDVLMGSSLN 222
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
+IK G+ + + +++ Y C + A R++D + N A N++I G + +IE
Sbjct: 223 SQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIE 282
Query: 302 DAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII---------- 347
D + F + + +Y+ ++ G + G K+ H II
Sbjct: 283 DGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS-----LGKLIHARIIVSDSLADLPL 337
Query: 348 --SLNTMISVIPEMER---------NP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+L M +M NP V+WNS+ISG +N E+A+ +Y + +++
Sbjct: 338 DNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMST 397
Query: 395 DRTRS-TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
R TFS A + G+LLH + K +E +V+VGT+L+ MY + AQ
Sbjct: 398 PRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQ 457
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F + +V WT ++ G+S G AV F M + + + V+ AC
Sbjct: 458 KVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMA 517
Query: 514 LVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
++ +G ++F + G + +VD+ G++G +E E I + D W ++
Sbjct: 518 MLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGK-YETAETIFSLASNPDLKCWNSM 575
Query: 573 LSA 575
L A
Sbjct: 576 LGA 578
>gi|5803274|dbj|BAA83584.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|55296350|dbj|BAD68395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596022|gb|EAZ35802.1| hypothetical protein OsJ_20095 [Oryza sativa Japonica Group]
Length = 763
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 209/734 (28%), Positives = 347/734 (47%), Gaps = 114/734 (15%)
Query: 17 LIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
++ N+ + E R G+L AR +FD MP R VVSWNT++ ++ ++ M
Sbjct: 34 VVSGNNRLMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMR 93
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R + + T+FST LS CA+L +L G+ +H LV KS FVG+ L+ YANC +
Sbjct: 94 RQGFRPDHTSFSTALSACARLEALEMGRCVHGLVFKSCSSGNVFVGASLITMYANCGVVS 153
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY----- 191
++V D + N LW+ ++ G V + + A F +MP ++VV WT +I G+
Sbjct: 154 CLEQVLDGVESPNVALWNALISGLVMNHRVGYARKAFDRMPVRNVVSWTAMIKGHFTAHE 213
Query: 192 -------------AKSVDGC------------EKALKLFRWMRESGENMPNEYTFDSVIR 226
SV C +A++LF + +GE + N ++
Sbjct: 214 VDMAFQLFKLMPVKNSVSWCVMIGGFVTHEKFSEAVELFNSLMMNGEEVTN-VILVKIVN 272
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC-------------------- 266
A A + + G+ +HGL +K GF +D + +L+ YC
Sbjct: 273 AFAGMKSIRGGRCIHGLAVKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGS 332
Query: 267 -----------EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE--- 312
+ D A +++D + N + NS+ING I+ GRI DA +++++TE
Sbjct: 333 WNAMLCGYIYSDKIDEARKLFDSMNNRDKISWNSMINGYINDGRIADATELYSKMTEKSL 392
Query: 313 ------------------ANSISYN----------SMIKGYAVYGQVDDSKRLFEKMPHR 344
A + YN +++ GY G +DD+ LF M R
Sbjct: 393 EAATALMSWFIDNGMLDKARDMFYNMPQIDVMSCTTLLFGYVKGGHMDDALDLFHMMQKR 452
Query: 345 SIISLNTMISVI--------------PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
++++ N MIS + R+ VTW+ +++G N L +ALQ Y +
Sbjct: 453 TVVTYNVMISGLFHQGKITEAYKLFNESPTRDSVTWSCLVAGLATNGLIHEALQFY---K 509
Query: 391 KLAIDRTRSTFSVLFHACSCLGS---LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
K+ + R + SV+ SCL + + GQ HA +K +S++ + SL+ +Y +CG
Sbjct: 510 KMLLSNIRPSESVVSSLISCLSNYSMMVHGQQFHATTIKIGLDSHLLIQNSLISLYCKCG 569
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
+ AQ+ F ++ + W +++GY+ + LG AV +FE M + + P+ TF+GVLS
Sbjct: 570 EMIIAQSIFDLMAKRDKVTWNTIIHGYALNNLGQNAVEMFESMTKAQVDPDDITFLGVLS 629
Query: 508 ACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
AC L+ E F +M +YG++P + HY C+VDL R + EAE +K MP E D+
Sbjct: 630 ACNHMSLLEEAKYFFNAMTCTYGILPNIMHYACMVDLFCRKCMIKEAEGLVKSMPFEPDS 689
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
+W +LLS C N ++ E AA ++ +D Y+ L +++ + K +R ++
Sbjct: 690 AIWTSLLSGCRLTGNDKLAEHAASQLIAIDPCTKMPYLHLISVHGLTNKSTVIDSLRSQI 749
Query: 627 THLEVKKDPGCSWI 640
+KD G SWI
Sbjct: 750 KSTATEKDVGYSWI 763
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 123/260 (47%), Gaps = 11/260 (4%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M Q+ +V+ N I+ G++ A LF++ P R V+W+ ++ G + E+L
Sbjct: 448 MMQKRTVVTYNVMISGLFHQGKITEAYKLFNESPTRDSVTWSCLVAGLATNGLIHEALQF 507
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M SN++ +E+ S+++S + + ++ G+Q H +K G + + + L+ Y
Sbjct: 508 YKKMLLSNIRPSESVVSSLISCLSNYSMMVHGQQFHATTIKIGLDSHLLIQNSLISLYCK 567
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV----VVWTKL 187
C E+ A+ +FD + + +++ W+ ++ GY NL +A ++F M K V + + +
Sbjct: 568 CGEMIIAQSIFDLMAKRDKVTWNTIIHGYALNNLGQNAVEMFESMTKAQVDPDDITFLGV 627
Query: 188 ISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
+S + E+A F M + +PN + ++ R C K GL+
Sbjct: 628 LSA-CNHMSLLEEAKYFFNAMTCTYGILPNIMHYACMVDLFCRK---CMIKEAEGLVKSM 683
Query: 248 GFEFDESIGGALIEFYCGCE 267
FE D +I +L+ GC
Sbjct: 684 PFEPDSAIWTSLLS---GCR 700
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 198/600 (33%), Positives = 306/600 (51%), Gaps = 84/600 (14%)
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S+ + + TF +L CA+L G + V K G+ FV + + F++ +
Sbjct: 115 SSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVL 174
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+R+FDE P +DVV W LI GY +S G
Sbjct: 175 ARRLFDE-------------------------------SPARDVVSWNTLIGGYVRS--G 201
Query: 198 CEK-ALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+ AL+LF + E G+ + P+E T + CA++G GK +H EF +S
Sbjct: 202 LPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLH--------EFVDSK 253
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
G C + M +Y + G +E A+ +F R+
Sbjct: 254 G-----VRCTVRLMNAVMDMY------------------VKCGSLELAKSVFERIDNKTV 290
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
+S+ +MI G+A G ++D++ LF++MP ER+ WN++++GYVQ
Sbjct: 291 VSWTTMIVGHARLGMMEDARMLFDEMP-----------------ERDVFPWNALMAGYVQ 333
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N ++A+ L+ M++ +D T L ACS LG+L+ G +H ++ + +V +
Sbjct: 334 NKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVAL 393
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
GTSLVDMY++CG+I A F I N WTA++ G ++HG EA+ F+ M++ +
Sbjct: 394 GTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGL 453
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
P+ TF+GVLSAC AGLV EG + F M + Y + ++HY+C++DLLGR+GHL EAE
Sbjct: 454 QPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAE 513
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
+ + MP++ DAVVWGAL AC N+ +GE+AA K+ LD YV+L+N+YA
Sbjct: 514 QLVNTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEAN 573
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
K +R + HL V+K PGCS IELN VH F V+D+++ + IY L +T +
Sbjct: 574 MRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTIAIYDCLHGITLQMK 633
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 206/421 (48%), Gaps = 26/421 (6%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN--VKLNETTFS 88
+G +V AR LFD+ P R VVSWNT++ GY + E+L L + V+ +E T
Sbjct: 169 SGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMI 228
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+S CAQ+ L GK++H V G C + + ++ Y C +E AK VF+ +
Sbjct: 229 GAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNK 288
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ W+ M+VG+ + +M DA +F +MP++DV W L++GY ++ G E A+ LF M
Sbjct: 289 TVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKE-AIALFHEM 347
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ES + PNE T +++ AC++LGA G VH + + ++G +L++ Y C
Sbjct: 348 QESKVD-PNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGN 406
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKG 324
A+ ++ + + ++I GL + G ++A F R+ + + I++ ++
Sbjct: 407 IKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSA 466
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
G V + ++ F M + +ER ++ MI + ++A Q
Sbjct: 467 CCHAGLVKEGRQFFSLMHEKY------------HLERKMKHYSCMIDLLGRAGHLDEAEQ 514
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMY 443
L TM +D + LF AC G++ G+ LV+ P +S +YV L +MY
Sbjct: 515 LVNTM---PMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYV--LLANMY 569
Query: 444 S 444
+
Sbjct: 570 A 570
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 33/221 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS I R G + AR LFD+MP R V WN ++ GY + + E+++L M
Sbjct: 290 VVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQE 349
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S V NE T +LS C+QL +L G +H + + +G+ L+ YA C I++
Sbjct: 350 SKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKK 409
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F E+ + N L W+ M+ G G+A
Sbjct: 410 AICIFKEIPDKNALTWTAMICGLAN--------------------------HGHA----- 438
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
++A++ F+ M + G P+E TF V+ AC G EG+
Sbjct: 439 -DEAIEYFQRMIDLGLQ-PDEITFIGVLSACCHAGLVKEGR 477
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 196/682 (28%), Positives = 340/682 (49%), Gaps = 64/682 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G + AR L D+MP R VS+N ++ YS+ SL ++ R+ V ++ +++
Sbjct: 55 RLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAA 114
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
L+ C++ L G+ +H L + G FV + L+ Y+ C E+ EA+RV
Sbjct: 115 ALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRV-------- 166
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
FDV ++D V W L+SGY ++ E+ +++F MR
Sbjct: 167 --------------------FDV---AEERDDVSWNSLVSGYVRA-GAREEMVRVFAMMR 202
Query: 210 ESGENMPNEYTFDSVIRACARLG--AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
G + N + SVI+ C+ G + VHG +IK G + D + A+I+ Y
Sbjct: 203 RGGMGL-NSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKG 261
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----------EANSIS 317
A A ++ ++ P + N++I G + E+ LT + +
Sbjct: 262 ALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFT 321
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ 359
++S+++ + G ++ K++ ++ + + + S + ++
Sbjct: 322 FSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP 381
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
+ + VTW +M+SG VQN LHEKAL L+ + T S + +AC+ L + G+
Sbjct: 382 KHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQ 441
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+ K+ F+ +G S V MY+R G ++ A F + S +V +W+A+++ ++ HG
Sbjct: 442 IQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGC 501
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYT 538
+A+ F+ M++ +VPN TF+GVL+AC GLV+EG++ + +M K YG+ PT++H T
Sbjct: 502 ARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCT 561
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
CVVDLLGR+G L +AE FI + D V+W +LL++C ++E G+ A ++ L+
Sbjct: 562 CVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPT 621
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
++YVIL N+Y G+ R + VKK+PG SWIEL VH+F D+++P
Sbjct: 622 SSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPE 681
Query: 659 CNVIYATLEHLTANLNSVVLFD 680
+ IY LE + + + + D
Sbjct: 682 SSAIYTKLEEMLSRIEKLATTD 703
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 209/462 (45%), Gaps = 49/462 (10%)
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMR 209
L + +L Y + A + +MP+++ V + LI Y++ +G +L+ R
Sbjct: 44 FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSR--EGLAPLSLETLARAR 101
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+G ++ + +++ + + AC+R G G+ VH L I G + +L+ Y C
Sbjct: 102 RAGVDV-DRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGY 325
A RV+D E + NSL++G + G E+ +F + NS + S+IK
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK-- 218
Query: 326 AVYGQVDDSKRLFEKMPHRSII--SLNTMISVIPEM---------------------ERN 362
G+ D + + E + H +I L++ + ++ M E N
Sbjct: 219 CCSGRGDGTMDIAEAV-HGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPN 277
Query: 363 PVTWNSMISGY------VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
V +N+MI+G+ + + +AL LY ++ + T TFS + AC+ G L+
Sbjct: 278 VVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEF 337
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +H ++K F+ + ++G++L+D+Y G + D F S ++ WTA+++G
Sbjct: 338 GKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQ 397
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
+ L +A+ LF L + P+ T V++AC + G +I + + +
Sbjct: 398 NELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI----QCFATKSGFDR 453
Query: 537 YTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+T + V + RSG + A ++M D V W A++S
Sbjct: 454 FTVMGNSCVHMYARSGDVDAATRRFQEMESH-DVVSWSAVIS 494
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/557 (22%), Positives = 233/557 (41%), Gaps = 96/557 (17%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N ++ + G++ AR +FD R VSWN+++ GY + +E + + + M R +
Sbjct: 147 SNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGM 206
Query: 81 KLNETTFSTILSVCA-QLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
LN +++ C+ + + +D + +H V+K+G + F+ S ++ YA + EA
Sbjct: 207 GLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEA 266
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+F + E N ++++ M+ G+ + + V+ ++ S
Sbjct: 267 AALFRSVQEPNVVMFNTMIAGFC----------------RTETVIGKEVAS--------- 301
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+AL L+ ++ G P E+TF SV+RAC G GK +HG +IK F+ D+ IG A
Sbjct: 302 -EALTLYSEVQSRGMQ-PTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSA 359
Query: 259 LIEFYCGCEAFDGAMRVYDR----------------LEN-------------------PC 283
LI+ Y + R + ++N P
Sbjct: 360 LIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPD 419
Query: 284 LNASNSLINGLISMGRIEDAELI--------FNRLTEANSISYNSMIKGYAVYGQVDDSK 335
L +S++N S+ E I F+R T + NS + YA G VD +
Sbjct: 420 LFTISSVMNACASLAVARAGEQIQCFATKSGFDRFT----VMGNSCVHMYARSGDVDAAT 475
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
R F++M ++S W+++IS + Q+ AL + M +
Sbjct: 476 RRFQEMESHDVVS-----------------WSAVISCHAQHGCARDALHFFDEMVDAKVV 518
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQA 454
TF + ACS G + +G + + K + T +VD+ R G + DA+A
Sbjct: 519 PNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEA 578
Query: 455 SFS-SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
S SI + W +L+ H L+ ++E + ++A++V + + + AG
Sbjct: 579 FISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPT-SSASYVILYNMYLDAG 637
Query: 514 LVNEGMKIFRSMKSYGV 530
++ K MK GV
Sbjct: 638 ELSLASKTRDLMKQRGV 654
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 208/661 (31%), Positives = 342/661 (51%), Gaps = 56/661 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L TAR LFD MP R VS+ T++ GY+ +F+E+L L + R ++N +TIL
Sbjct: 96 GPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTIL 155
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
V +++ IH K G++ FVG+ L+ Y+ C + A+
Sbjct: 156 KVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHAR------------ 203
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
C VF + KD V WT ++S Y+++ D E AL F MR +
Sbjct: 204 -----------C--------VFDGIVGKDAVTWTAMVSCYSEN-DIPEYALNTFSKMRMT 243
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PN + S ++A L + GK +HG +K ++ + +GGAL++ Y C +
Sbjct: 244 GFK-PNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIED 302
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAV 327
A +++ + + + + LI+ + E A +F R+ + N S + +++ A
Sbjct: 303 AHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACAN 362
Query: 328 YGQVDDSKRLFE---KMPHRSII----SLNTMISVIPEMER-----------NPVTWNSM 369
++ +++ K+ + S + +L M + ME N V+WN++
Sbjct: 363 IAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTI 422
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
I GY Q+ E AL ++ MR + T+ TFS + AC+ S++ +H+ + K+ F
Sbjct: 423 IVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTF 482
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
++ V SL+D Y++CG I DA F SI +V +W ++++ Y+ HG + A+ LF+
Sbjct: 483 NNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDR 542
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVVPTLEHYTCVVDLLGRSG 548
M + DI N TFV +LS C GLVN+G+ +F S M + + P++EHYTC+V LLGR+G
Sbjct: 543 MNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAG 602
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L +A +FI D+P +VW ALLS+C N+ +G AA+K+ ++ + YV+LSN
Sbjct: 603 RLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSN 662
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YA G + RK + ++ VKK+ G SW+E+ VHAFSV ++P+ +I A LE
Sbjct: 663 MYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEW 722
Query: 669 L 669
L
Sbjct: 723 L 723
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 123/543 (22%), Positives = 225/543 (41%), Gaps = 106/543 (19%)
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG--YECFEFVGSGLLFFYANCFEIEEA 138
KL+ + L C G+ +H V++ G + F + LL FYA + A
Sbjct: 42 KLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATA 101
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+R+FD + E N V + L+ GYA +
Sbjct: 102 RRLFDGMPERNR-------------------------------VSFVTLMQGYALRGE-F 129
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
E+AL+LFR ++ G + N + ++++ + A +H K G + + +G A
Sbjct: 130 EEALELFRRLQREGHEV-NHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTA 188
Query: 259 LIEFY--CG--CEA---FDG------------------------------AMRVYDRLEN 281
LI+ Y CG C A FDG MR+ N
Sbjct: 189 LIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPN 248
Query: 282 P-----CLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
P L A+ L + L+ G I + L + +++ YA G ++D+
Sbjct: 249 PFVLTSALKAAVCLSSALLGKG-IHGCSV--KTLYDTEPHVGGALLDMYAKCGDIEDAHA 305
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+FE +PH +I W+ +IS Y Q+ +E+A ++++ M + +
Sbjct: 306 IFEMIPHDDVI-----------------LWSFLISRYAQSCQNEQAFEMFLRMMRSFVVP 348
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ S + AC+ + L+ G+ +H +K +ES ++VG +L+DMY++C ++ ++ F
Sbjct: 349 NEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIF 408
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
SS+ N +W ++ GY G +A+ +F M ++ TF VL AC +
Sbjct: 409 SSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIK 468
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
++I ++ T + T V +D + G + +A + + + +E D V W ++
Sbjct: 469 HAVQIHSLIEK----STFNNDTIVCNSLIDTYAKCGFIRDALKVFESI-VECDVVSWNSI 523
Query: 573 LSA 575
+SA
Sbjct: 524 ISA 526
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 4 YATQSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+A Q +L+ + T + N I + G + A +F+ + VVSWN+++ Y+
Sbjct: 469 HAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYA 528
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+ +L L M++S++K N+ TF ++LSVC
Sbjct: 529 LHGRATNALELFDRMNKSDIKANDVTFVSLLSVCG 563
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 180/595 (30%), Positives = 318/595 (53%), Gaps = 25/595 (4%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE-FVGSGLLFFYANCFEIEEAKRVFDEL 145
++ ++ CA+ N I K++ + + ++ + F+ + LL YA ++ +A+ VFD +
Sbjct: 25 YTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNM 84
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ + W+ +L Y + ++ + VF +MP +D V + LI+ +A S KALK+
Sbjct: 85 TKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFA-SNGHSGKALKVL 143
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M+E G P +Y+ + ++AC++L GK +HG ++ + + A+ + Y
Sbjct: 144 VRMQEDGFQ-PTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAK 202
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSM 321
C D A ++D + + + + N +I+G + MG + +FN + + + ++ +++
Sbjct: 203 CGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNV 262
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK 381
+ Y G+VDD++ LF K+P +++ + W +MI GY QN E
Sbjct: 263 LNAYFRCGRVDDARNLFIKLP-----------------KKDEICWTTMIVGYAQNGREED 305
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
A L+ M + + T S + +C+ L SL GQ++H +V ++++ V ++LVD
Sbjct: 306 AWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVD 365
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY +CG DA+ F ++ NV W A++ GY+ +G EA+ L+E M +++ P+ T
Sbjct: 366 MYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNIT 425
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
FVGVLSAC+ A +V EG K F S+ +G+ PTL+HY C++ LLGRSG + +A + I+ MP
Sbjct: 426 FVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMP 485
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
E + +W LLS C +++ E AA +F LD + Y++LSN+YA G+W
Sbjct: 486 HEPNYRIWSTLLSVCAKG-DLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAV 544
Query: 622 IRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+R + KK SW+E+ ++VH F ED +P IY L L + L +
Sbjct: 545 VRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQI 599
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 218/507 (42%), Gaps = 91/507 (17%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N ++ + G + +FDQMP R VS+NT++ ++ ++L ++ M
Sbjct: 89 VYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQE 148
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + + L C+QL L GKQIH ++ + FV + + YA C +I++
Sbjct: 149 DGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDK 208
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQ----------------------------------- 162
A+ +FD + + N + W+LM+ GYV+
Sbjct: 209 ARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFR 268
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
C + DA ++FIK+PKKD + WT +I GYA++ E A LF M P+ YT
Sbjct: 269 CGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGRE-EDAWMLFGDMLRRNVK-PDSYTIS 326
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
S++ +CA+L + G+VVHG ++ G + + AL++ YC C
Sbjct: 327 SMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKC---------------- 370
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
G DA +IF + N I++N+MI GYA GQV ++ L+E+M
Sbjct: 371 ---------------GVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQ 415
Query: 343 HRSIISLN-TMISVI-----PEMERNPVTWNSMISGY-VQNNLHEKALQLYMTMRKLAID 395
+ N T + V+ +M + + IS + + L A + + R ++D
Sbjct: 416 QENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVD 475
Query: 396 RT------------RSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDM 442
+ +S L C+ G L+ +L +HL + P + Y+ L ++
Sbjct: 476 KAVDLIQGMPHEPNYRIWSTLLSVCA-KGDLKNAELAASHLFELDPRNAGPYI--MLSNL 532
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTA 469
Y+ CG D S + N + A
Sbjct: 533 YAACGRWKDVAVVRSLMKEKNAKKFAA 559
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 207/645 (32%), Positives = 337/645 (52%), Gaps = 49/645 (7%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS N ++ +G+L AR LFD+MP R VSWNTM+ S+ + +++ L M
Sbjct: 42 VVSYNAMVSALAHHGRLAEARRLFDEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPA 101
Query: 78 SN-----------VKLNETTFSTIL-------SVCAQLNSLI-----DGKQIHCLVLKSG 114
N V+ E T + L A N++I +G+ + L
Sbjct: 102 RNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQE 161
Query: 115 YECFEFVG-SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
+ V + +L EI + + FDE+ + + + W+LML GYV+ + A F
Sbjct: 162 MPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFF 221
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
++P +V+ W L++GY ++ E A +LF M E N ++ ++ +
Sbjct: 222 SRIPSPNVISWVNLVNGYCQAGRMGE-ARELFDRMPER-----NVVAWNVLLSGYVQ--- 272
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
F + + + L I+ E + ++ + A V ++ + + A +L++G
Sbjct: 273 FSQVEAAYNLFIEMP-EKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHG 331
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+ I+DA +F+ + +++ +N+MI GY G +D++ LF++MP++ +IS NTMI
Sbjct: 332 YLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMI 391
Query: 354 -------------SVIPEMER-NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
S+ +M+R N V+WNS+ISG+VQN L +ALQ +M MR+ A
Sbjct: 392 AGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWC 451
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T++ A + L +LQ G+ H+ LV+T F S+ G +L+ Y++CG + +A+ F +
Sbjct: 452 TYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEM 511
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
++ +W AL++GY+ +G GSE + +F M + P+ T V VLSAC AGL++EG+
Sbjct: 512 VVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGL 571
Query: 520 KIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
F SM K Y + P EHYTC+VDLLGR+G L EA E ++ M I+ +A VWGALL AC
Sbjct: 572 HFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRV 631
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
N E+ AA+K+F L+ S YV+LSNI GKW +R
Sbjct: 632 HKNHEIAWLAAEKLFELEPCKASNYVLLSNICVEAGKWDDADKVR 676
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 122/517 (23%), Positives = 208/517 (40%), Gaps = 98/517 (18%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +V+ N ++ + Q+ A NLF +MP + +SW TM+ G+ + K E+ ++S
Sbjct: 257 ERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSK 316
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M NV L + N + D +Q+ ++ C+ + SG Y C
Sbjct: 317 MPSDNVGAKTALMHGYL----KSNLIDDARQLFDGIVVRDAVCWNTMISG----YVQCGM 368
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
++EA +F ++ + + W+ M+ G Q + A +F KM +++ V W +ISG+ ++
Sbjct: 369 LDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQN 428
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
E AL+ F MR ++ + T+ + A A L G+ H LL++ GF D S
Sbjct: 429 GLFVE-ALQHFMLMRRDAKS-ADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSS 486
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
G ALI Y C GR+ +A +F+ + +
Sbjct: 487 PGNALISAYAKC-------------------------------GRMLEARQVFDEMVVQD 515
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
+S+N++I GYA G + +I+V EME N V + +
Sbjct: 516 IVSWNALIDGYASNGNGSE------------------VIAVFREMEANSVRPDEI----- 552
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK----TPFE 430
T V+ ACS G + +G ++K P
Sbjct: 553 -------------------------TLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVA 587
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ T +VD+ R G + +A + PN W AL+ H A L E
Sbjct: 588 EHY---TCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEK 644
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
+ E + A+ +V + + CV AG ++ K+ MK
Sbjct: 645 LFELEPC-KASNYVLLSNICVEAGKWDDADKVRVLMK 680
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 143/306 (46%), Gaps = 31/306 (10%)
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
A R+++ + + + N++++ L GR+ +A +F+ + N +S+N+M+ + +G+
Sbjct: 29 AARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRRNPVSWNTMMVACSQHGR 88
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPE----------MERNP-----VTWNSMISGYVQ 375
V+D++ LF+ MP R+ S M+S ++R P +N+MISGY +
Sbjct: 89 VEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAK 148
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N E A+ L M I S L S+Q + P + ++
Sbjct: 149 NGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQ-------FFDEMP-DKDLVS 200
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
+++ Y R G ++ A A FS I SPNV +W L+NGY G EA LF+ M E+++
Sbjct: 201 WNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNV 260
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
V + +LS V+ V +F M + +T +V RSG L EA++
Sbjct: 261 V----AWNVLLSGYVQFSQVEAAYNLFIEMPEKNSIS----WTTMVSGFVRSGKLQEAKD 312
Query: 556 FIKDMP 561
+ MP
Sbjct: 313 VLSKMP 318
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 130/281 (46%), Gaps = 30/281 (10%)
Query: 309 RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP----------- 357
+LT + N + A GQ+ ++RLFE+MP R+++S N M+S +
Sbjct: 5 KLTASAVFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRL 64
Query: 358 --EM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
EM RNPV+WN+M+ Q+ E A L+ M R +++++ SC
Sbjct: 65 FDEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPA----RNEYSWTIMV---SCYVRA 117
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ L L + P E +++ Y++ G DA A + +P++ +W +++ G
Sbjct: 118 GELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGL 177
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
+ S +V F+ M ++D+V ++ +L VRAG ++ F + S P +
Sbjct: 178 IRNEEISRSVQFFDEMPDKDLV----SWNLMLEGYVRAGDLDVASAFFSRIPS----PNV 229
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ +V+ ++G + EA E MP E + V W LLS
Sbjct: 230 ISWVNLVNGYCQAGRMGEARELFDRMP-ERNVVAWNVLLSG 269
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 196/682 (28%), Positives = 340/682 (49%), Gaps = 64/682 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G + AR L D+MP R VS+N ++ YS+ SL ++ R+ V ++ +++
Sbjct: 55 RLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAA 114
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
L+ C++ L G+ +H L + G FV + L+ Y+ C E+ EA+RV
Sbjct: 115 ALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRV-------- 166
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
FDV ++D V W L+SGY ++ E+ +++F MR
Sbjct: 167 --------------------FDV---AEERDDVSWNSLVSGYVRA-GAREEMVRVFAMMR 202
Query: 210 ESGENMPNEYTFDSVIRACARLG--AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
G + N + SVI+ C+ G + VHG +IK G + D + A+I+ Y
Sbjct: 203 RGGMGL-NSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKG 261
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----------EANSIS 317
A A ++ ++ P + N++I G + E+ LT + +
Sbjct: 262 ALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFT 321
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ 359
++S+++ + G ++ K++ ++ + + + S + ++
Sbjct: 322 FSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP 381
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
+ + VTW +M+SG VQN LHEKAL L+ + T S + +AC+ L + G+
Sbjct: 382 KHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQ 441
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+ K+ F+ +G S V MY+R G ++ A F + S +V +W+A+++ ++ HG
Sbjct: 442 IQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGC 501
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYT 538
+A+ F+ M++ +VPN TF+GVL+AC GLV+EG++ + +M K YG+ PT++H T
Sbjct: 502 ARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCT 561
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
CVVDLLGR+G L +AE FI + D V+W +LL++C ++E G+ A ++ L+
Sbjct: 562 CVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPT 621
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
++YVIL N+Y G+ R + VKK+PG SWIEL VH+F D+++P
Sbjct: 622 SSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPE 681
Query: 659 CNVIYATLEHLTANLNSVVLFD 680
+ IY LE + + + + D
Sbjct: 682 SSAIYTKLEEMLSRIEKLATTD 703
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 209/462 (45%), Gaps = 49/462 (10%)
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMR 209
L + +L Y + A + +MP+++ V + LI Y++ +G +L+ R
Sbjct: 44 FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSR--EGLAPLSLETLARAR 101
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+G ++ + +++ + + AC+R G G+ VH L I G + +L+ Y C
Sbjct: 102 RAGVDV-DRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGY 325
A RV+D E + NSL++G + G E+ +F + NS + S+IK
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK-- 218
Query: 326 AVYGQVDDSKRLFEKMPHRSII--SLNTMISVIPEM---------------------ERN 362
G+ D + + E + H +I L++ + ++ M E N
Sbjct: 219 CCSGRGDGTMDIAEAV-HGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPN 277
Query: 363 PVTWNSMISGY------VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
V +N+MI+G+ + + +AL LY ++ + T TFS + AC+ G L+
Sbjct: 278 VVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEF 337
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +H ++K F+ + ++G++L+D+Y G + D F S ++ WTA+++G
Sbjct: 338 GKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQ 397
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
+ L +A+ LF L + P+ T V++AC + G +I + + +
Sbjct: 398 NELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI----QCFATKSGFDR 453
Query: 537 YTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+T + V + RSG + A ++M D V W A++S
Sbjct: 454 FTVMGNSCVHMYARSGDVDAATRRFQEMESH-DVVSWSAVIS 494
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 127/557 (22%), Positives = 233/557 (41%), Gaps = 96/557 (17%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N ++ + G++ AR +FD R VSWN+++ GY + +E + + + M R +
Sbjct: 147 SNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGM 206
Query: 81 KLNETTFSTILSVCA-QLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
LN +++ C+ + + +D + +H V+K+G + F+ S ++ YA + EA
Sbjct: 207 GLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEA 266
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+F + E N ++++ M+ G+ + + V+ ++ S
Sbjct: 267 AALFRSVQEPNVVMFNTMIAGFC----------------RTETVIGKEVAS--------- 301
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+AL L+ ++ G P E+TF SV+RAC G GK +HG +IK F+ D+ IG A
Sbjct: 302 -EALTLYSEVQSRGMQ-PTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSA 359
Query: 259 LIEFYCGCEAFDGAMRVYDR----------------LEN-------------------PC 283
LI+ Y + R + ++N P
Sbjct: 360 LIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPD 419
Query: 284 LNASNSLINGLISMGRIEDAELI--------FNRLTEANSISYNSMIKGYAVYGQVDDSK 335
L +S++N S+ E I F+R T + NS + YA G VD +
Sbjct: 420 LFTISSVMNACASLAVARAGEQIQCFATKSGFDRFT----VMGNSCVHMYARSGDVDAAT 475
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
R F++M ++S W+++IS + Q+ AL + M +
Sbjct: 476 RRFQEMESHDVVS-----------------WSAVISCHAQHGCARDALHFFDEMVDAKVV 518
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQA 454
TF + ACS G + +G + + K + T +VD+ R G + DA+A
Sbjct: 519 PNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEA 578
Query: 455 SFSS-ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
S+ I + W +L+ H L+ ++E + ++A++V + + + AG
Sbjct: 579 FISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPT-SSASYVILYNMYLDAG 637
Query: 514 LVNEGMKIFRSMKSYGV 530
++ K MK GV
Sbjct: 638 ELSLASKTRDLMKQRGV 654
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/565 (32%), Positives = 322/565 (56%), Gaps = 35/565 (6%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK-KDVVVWTKLISGYA 192
+I EA++VF+E+ + + + W+ ++ GY++C ++ +A +F + K+VV WT L+SGY
Sbjct: 81 KIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYV 140
Query: 193 KSVDGCEKALKLFRWMRESGENMP--NEYTFDSVIRACARLGAFCEGKVVHGL-LIKCGF 249
+ + E+A +LF + MP N +++++I AR +G + L L +
Sbjct: 141 RW-NRIEEARRLF-------DAMPVKNVISWNTMIEGYAR-----KGWIDQALDLFEXMP 187
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
E + +I + D A +++R+ + + +++ GL GRI+DA L+F++
Sbjct: 188 ERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDK 247
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE---MER----- 361
+ N +S+N+MI GYA ++D++ +LFE+MP R + S NTMI+ + +ER
Sbjct: 248 MPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFF 307
Query: 362 ------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACSCLGSL 414
N VTW ++ISG+VQ+ E+AL+++ M+ + TF + ACS L +L
Sbjct: 308 YKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAAL 367
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS--SISSPNVAAWTALMN 472
+GQ +H + KT ++ V ++L++MYS+CG + A+ F SI +V +W ++
Sbjct: 368 CEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIA 427
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVV 531
Y+HHG G +A+ LF+ M P+ T++ +LSAC AGLV+EG+K+F ++ + +
Sbjct: 428 AYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIK 487
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
+H+TC+VDL GR+G L EA +FIK + ++ A VW ALL+ C ++++G+ A+K
Sbjct: 488 LREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEK 547
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+ + + Y++LSNIYA GKW + +R ++ +KK PGCSWIE+ + VH F V
Sbjct: 548 LLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVV 607
Query: 652 EDRNNPNCNVIYATLEHLTANLNSV 676
D ++ IY L L + +
Sbjct: 608 GDNSHREFENIYLLLHDLHTKMKKI 632
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 214/461 (46%), Gaps = 64/461 (13%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R ++ AR LFD MP++ V+SWNTM+ GY++ D++L L M NV +++T
Sbjct: 141 RWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPERNV----VSWNT 196
Query: 90 ILSVCAQ----------LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF----------- 128
+++ Q N + + I + +G + L F
Sbjct: 197 VITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSW 256
Query: 129 ------YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
YA ++EA ++F+++ E W+ M+ G++Q + A D F KM K+VV
Sbjct: 257 NTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVV 316
Query: 183 VWTKLISGYAKSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
WT +ISG+ + DG E+ALK+F M+ + PNE TF SV+ AC++L A CEG+ +H
Sbjct: 317 TWTAVISGHVQ--DGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIH 374
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD--RLENPCLNASNSLINGLISMGR 299
++ K ++ + ALI Y C + A +++D + + + + N +I G
Sbjct: 375 QIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGH 434
Query: 300 IEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL--NTMI 353
A +F+ + ++++Y +++ + G VD+ +LFE + I L +
Sbjct: 435 GHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFT 494
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
++ R +G +Q + + ++ L + + S ++ L C+ G
Sbjct: 495 CLVDLFGR---------AGRLQ--------EAFDFIKGLEVKPSASVWAALLAGCNVHGH 537
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLV--DMYSRCGSINDA 452
+ G+L L++T E+ GT LV ++Y+ G +A
Sbjct: 538 IDLGKLTAEKLLETEPEN---AGTYLVLSNIYASTGKWREA 575
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 161/343 (46%), Gaps = 47/343 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E + S N IT +NG+L A + F +M + VV+W ++ G+ + + +E+L + S
Sbjct: 281 ERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSE 340
Query: 75 MHRSN-VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M +N VK NE TF ++L C++L +L +G+QIH ++ K+ Y+ V S L+ Y+ C
Sbjct: 341 MQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCG 400
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
E+E A+++FD+ +G+ +DVV W +I+ YA
Sbjct: 401 ELELARKIFDDGS-----------IGH------------------RDVVSWNGMIAAYAH 431
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
G KA+ LF M+ G P+ T+ +++ AC+ G EG + L++ D
Sbjct: 432 HGHG-HKAISLFDEMQALGFR-PDNVTYIALLSACSHAGLVDEGLKLFENLVR-----DR 484
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLE-------NPCLNASNSLINGLISMGRIEDAELI 306
SI F C + F A R+ + + P + +L+ G G I+ +L
Sbjct: 485 SIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLT 544
Query: 307 FNRLTEA---NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
+L E N+ +Y + YA G+ ++ + KM + +
Sbjct: 545 AEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGL 587
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 158/374 (42%), Gaps = 75/374 (20%)
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
V D N + SN LI L G+I +A +F + + + +S+ ++I GY G ++++
Sbjct: 57 VRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEA 116
Query: 335 K--------------------------------RLFEKMPHRSIISLNTMI--------- 353
K RLF+ MP +++IS NTMI
Sbjct: 117 KTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWI 176
Query: 354 -------SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM----------------R 390
+P ERN V+WN++I+ ++Q ++A +L+ M +
Sbjct: 177 DQALDLFEXMP--ERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSK 234
Query: 391 KLAIDRTRSTF------SVLFHACSCLGSLQQGQLLHA-HLVKTPFESNVYVGTSLVDMY 443
ID R F +V+ +G Q +L A L + E + +++ +
Sbjct: 235 NGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGF 294
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATF 502
+ G + A F +S+ NV WTA+++G+ G EA+ +F E+ ++ PN TF
Sbjct: 295 IQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTF 354
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
V VL AC + + EG +I + + + + ++++ + G L A + D I
Sbjct: 355 VSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSI 414
Query: 563 -ELDAVVWGALLSA 575
D V W +++A
Sbjct: 415 GHRDVVSWNGMIAA 428
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 197/679 (29%), Positives = 329/679 (48%), Gaps = 65/679 (9%)
Query: 22 NKAITECGRNGQ--LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N+ +T R+ L AR +FD++P R VSWN +L + E+ L+ MH
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ N + L A G Q+ L LKSG F S LL YA C + +A+
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+VFD + E N + W+ ++ GY + M+ A ++F++M ++ +
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLA----------------- 191
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
P+E TF S++ A F + +HG ++K G ++ A
Sbjct: 192 ----------------PDEATFASLLTAVEGPSCFLMHQ-LHGKIVKYGSALGLTVLNAA 234
Query: 260 IEFYCGCEAFDGAMRVYDRLEN-PCLNASNSLINGLISMGRIEDAELIFNRLTEANSI-- 316
I Y C + + R++D + + L + N+++ G ++A F R+ + + +
Sbjct: 235 ITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHP 294
Query: 317 ---SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS-----LNTMISVIPEMERN------ 362
S+ S+I + +G D R+ + +S + N +I++ N
Sbjct: 295 DMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDA 354
Query: 363 -----------PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
V+WNSM++GY Q+ L AL+ + M + FS + S L
Sbjct: 355 YKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSEL 414
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
LQ G+ +H ++ + F SN +V +SL+ MYS+ G I+DA+ SF + W A++
Sbjct: 415 AVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMI 474
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGV 530
GY+ HG +LF ML++ + TFVG++++C AGLV+EG +I +M++ YGV
Sbjct: 475 FGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGV 534
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
+EHY C VDL GR+G L +A++ I MP E DA+VW LL AC N+E+ A
Sbjct: 535 PLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVAS 594
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
+F + + S YV+LS++Y+ LG W + +++ + + K PG SWIE+ + VH+F+
Sbjct: 595 HLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFN 654
Query: 651 VEDRNNPNCNVIYATLEHL 669
ED+++P + IY L L
Sbjct: 655 AEDKSHPKMDEIYEMLRVL 673
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 200/650 (30%), Positives = 339/650 (52%), Gaps = 56/650 (8%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSK-WAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
L A +LFD+MP T + ++T L S+ + L M R+ V+ + TF +
Sbjct: 52 HLRYALHLFDRMPPSTFL-FDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLF 110
Query: 92 S---VCAQLNSLIDGKQIHCLVLKSGYE-CFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
++ +SL+ +H L++ FV + L+ Y +A+R FDE+H
Sbjct: 111 KCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHV 170
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
+ + W++++ G + ++ D + + P +DV+ WT LI+ Y+++ + +A+ F+
Sbjct: 171 KDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRA-NRAREAVGCFKT 229
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M G P+E T +V+ ACA+L G+ +H L+ + G E++ ALI+ Y C
Sbjct: 230 MLSHG-IAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCG 288
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAV 327
F A +V+D ++GR + S+N++I GY
Sbjct: 289 DFGHAQQVFD------------------ALGRGPRPQ------------SWNAIIDGYCK 318
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
+G VD ++ LF++M R II T+NSM++GY+ + +AL L+M
Sbjct: 319 HGHVDVARSLFDEMEVRDII-----------------TFNSMMTGYIHSGQLREALLLFM 361
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
+MR+ + T L AC+ LG+LQQG+ LHA + + E+++Y+GT+L+DMY +CG
Sbjct: 362 SMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCG 421
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
+++A F + +V WTA++ G + +G+G A+ F M PN+ +++ VL+
Sbjct: 422 RVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLT 481
Query: 508 ACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
AC + L+NEG F M+ Y + P +EHY C++DLLGRSG L EA + +K MPI+ +A
Sbjct: 482 ACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNA 541
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
V+W ++LSAC ++++ + AA+ + L+ YV L NIY +W IR +
Sbjct: 542 VIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLM 601
Query: 627 THLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+VKK G S I + +VH F V D+++P I A LE ++ L S+
Sbjct: 602 EERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSL 651
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 197/417 (47%), Gaps = 23/417 (5%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
I+ + G L + L Q P+R V+SW +++ YS+ + E++ TM + +E
Sbjct: 180 ISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDE 239
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
T +LS CA+L L G+ +H LV + G E + L+ YA C + A++VFD
Sbjct: 240 VTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDA 299
Query: 145 LHE-DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
L W+ ++ GY + + A +F +M +D++ + +++GY S +AL
Sbjct: 300 LGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHS-GQLREALL 358
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
LF MR + N +T +++ ACA LGA +G+ +H + + E D +G AL++ Y
Sbjct: 359 LFMSMRRHDLRVDN-FTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMY 417
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYN 319
C D A V+ R+ ++ ++I GL G + A F ++ + NS+SY
Sbjct: 418 MKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYI 477
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
+++ + +++ + F++M + ++ P++E + MI ++ L
Sbjct: 478 AVLTACSHSCLLNEGRLYFDEM--------RILYNIHPQIEH----YGCMIDLLGRSGLL 525
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYV 435
++A+ L TM I ++ + AC + Q HL+K P E VYV
Sbjct: 526 DEAMDLVKTM---PIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYV 579
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 33/220 (15%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N I ++G + AR+LFD+M +R ++++N+M+ GY + E+L L +M R +
Sbjct: 308 SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHD 367
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
++++ T +L+ CA L +L G+ +H + + E ++G+ LL Y C ++EA
Sbjct: 368 LRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEAT 427
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VF +M K+DV WT +I+G A + G +
Sbjct: 428 IVFQ-------------------------------RMGKRDVHTWTAMIAGLAFNGMG-K 455
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
AL+ F MR G PN ++ +V+ AC+ EG++
Sbjct: 456 AALEHFYQMRCDGFQ-PNSVSYIAVLTACSHSCLLNEGRL 494
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/603 (31%), Positives = 315/603 (52%), Gaps = 53/603 (8%)
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L C+ LN + KQIH VLK+ FVG L+
Sbjct: 24 LHRCSSLNQV---KQIHAQVLKANLHRESFVGQKLI------------------------ 56
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ C M+ A +VF ++ DV+++ LI + ++ + A +F M++
Sbjct: 57 -------AAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPL-LAFSVFFEMQD 108
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE--FYCGCEA 268
SG N +T+ +++AC+ +++H + K GF D + +LI+ F CG +
Sbjct: 109 SGVCADN-FTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDG 167
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
A +V++ + + NS+I GL+ +G + +A +F+ + E +++S+N+++ GY
Sbjct: 168 VAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKA 227
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMI---SVIPEME-----------RNPVTWNSMISGYV 374
G+++ + LFEKMP R+++S +TM+ S +M+ +N V W MISGY
Sbjct: 228 GEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYA 287
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
+ L + A+ LY M + + T + AC+ G L G+ +HA + +T F+ +
Sbjct: 288 EKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTP 347
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
V +L+DMY++CGS+ +A + F + +V +W A++ G + HG G +A+ LF M +
Sbjct: 348 VSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEG 407
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
VP+ TFVGVL AC AG V+EG+ F +M + YGV P +EHY C+VDLLGR G L EA
Sbjct: 408 FVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEA 467
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
+ MP+E +A++WG LL AC + E ++ + +LSNIYA
Sbjct: 468 FRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAA 527
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
G W +IR R+ ++K G S IE++ VH F+V DR++P + IY T++ L ++
Sbjct: 528 GDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTIDGLGQHI 587
Query: 674 NSV 676
N +
Sbjct: 588 NKL 590
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 173/387 (44%), Gaps = 58/387 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS + + + G + AR LFD+MP++ +V W M+ GY++ ++++L + M
Sbjct: 245 VVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEE 304
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ +K ++ T +ILS CA L GK++H + ++ ++C V + L+ YA C +E
Sbjct: 305 AGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLE- 363
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+A +F M +KDVV W +I G A G
Sbjct: 364 ------------------------------NALSIFHGMVRKDVVSWNAIIQGLAMHGHG 393
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIG 256
EKAL+LF M+ G +P++ TF V+ AC G EG H + E D +
Sbjct: 394 -EKALQLFSRMKGEG-FVPDKVTFVGVLCACTHAGFVDEGLHYFHAM------ERDYGVP 445
Query: 257 GALIEFYCGCEAFDGAMRVYD--RLENPCLNASNSLING-LISMGRIED----AELIFNR 309
+ + C + R+ + RL + N++I G L+ R+ AE +F+R
Sbjct: 446 PEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDR 505
Query: 310 LTEAN-SISYN-SMIKG-YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
L ++ S S N SM+ YA G D+ + +M SI + S+ + E + T
Sbjct: 506 LVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFT- 564
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLA 393
V + H K+ ++Y T+ L
Sbjct: 565 -------VFDRSHPKSDRIYKTIDGLG 584
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 208/479 (43%), Gaps = 47/479 (9%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
Q+ A N+F+Q+ V+ +NT++ + + ++ + S+ M S V + T+ +L
Sbjct: 64 QMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLK 123
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF--EIEEAKRVFDELHEDNE 150
C+ + + IH V K G+ FV + L+ Y C + A++VF+ + E +
Sbjct: 124 ACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDT 183
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W+ M+ G V+ + +A +F +MP++D V W ++ GY K+ + A +LF
Sbjct: 184 VSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGE-MNAAFELF----- 237
Query: 211 SGENMP--NEYTFDSVIRACARLGAFCEGKVV-HGLLIKCGFEFDESIGGALIEFYCGCE 267
E MP N ++ +++ ++ G +++ + +K + I G Y
Sbjct: 238 --EKMPARNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISG-----YAEKG 290
Query: 268 AFDGAMRVYDRLENPCLNASNSL---------INGLISMGRIEDAELIFNRLTEANSISY 318
A+ +Y+++E L + ++GL+ +G+ A + R + +S
Sbjct: 291 LAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVS- 349
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N++I YA G ++++ +F M + ++S N + I G +
Sbjct: 350 NALIDMYAKCGSLENALSIFHGMVRKDVVSWNAI-----------------IQGLAMHGH 392
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGT 437
EKALQL+ M+ + TF + AC+ G + +G HA V
Sbjct: 393 GEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYG 452
Query: 438 SLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
+VD+ R G + +A S+ PN W L+ H A +F+ +++ ++
Sbjct: 453 CMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSEL 511
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 122/296 (41%), Gaps = 72/296 (24%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E VS N I + G+L AR LFD+MP R VSWNT+L GY K + + + L
Sbjct: 180 ERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEK 239
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M NV ++ST ++ Y+ +
Sbjct: 240 MPARNV----VSWST-----------------------------------MVLGYSKAGD 260
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
++ A+ +FD++ N + W++M+ GY + L DA +++ +M
Sbjct: 261 MDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQME----------------- 303
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
E LK ++ T S++ ACA G GK VH + + F+
Sbjct: 304 ----EAGLKF------------DDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTP 347
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
+ ALI+ Y C + + A+ ++ + + + N++I GL G E A +F+R+
Sbjct: 348 VSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRM 403
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 197/679 (29%), Positives = 329/679 (48%), Gaps = 65/679 (9%)
Query: 22 NKAITECGRNGQ--LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N+ +T R+ L AR +FD++P R VSWN +L + E+ L+ MH
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ N + L A G Q+ L LKSG F S LL YA C + +A+
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+VFD + E N + W+ ++ GY + M+ A ++F++M ++ +
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLA----------------- 191
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
P+E TF S++ A F + +HG ++K G ++ A
Sbjct: 192 ----------------PDEATFASLLTAVEGPSCFLMHQ-LHGKIVKYGSALGLTVLNAA 234
Query: 260 IEFYCGCEAFDGAMRVYDRLEN-PCLNASNSLINGLISMGRIEDAELIFNRLTEANSI-- 316
I Y C + + R++D + + L + N+++ G ++A F R+ + + +
Sbjct: 235 ITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHP 294
Query: 317 ---SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS-----LNTMISVIPEMERN------ 362
S+ S+I + +G D R+ + +S + N +I++ N
Sbjct: 295 DMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDA 354
Query: 363 -----------PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
V+WNSM++GY Q+ L AL+ + M + FS + S L
Sbjct: 355 YKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSEL 414
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
LQ G+ +H ++ + F SN +V +SL+ MYS+ G I+DA+ SF + W A++
Sbjct: 415 AVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMI 474
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGV 530
GY+ HG +LF ML++ + TFVG++++C AGLV+EG +I +M++ YGV
Sbjct: 475 FGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGV 534
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
+EHY C VDL GR+G L +A++ I MP E DA+VW LL AC N+E+ A
Sbjct: 535 PLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVAS 594
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
+F + + S YV+LS++Y+ LG W + +++ + + K PG SWIE+ + VH+F+
Sbjct: 595 HLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFN 654
Query: 651 VEDRNNPNCNVIYATLEHL 669
ED+++P + IY L L
Sbjct: 655 AEDKSHPKMDEIYEMLRVL 673
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 297/557 (53%), Gaps = 58/557 (10%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A VF + + ++++W + G+A S D ALKL+ M G +PN YTF ++++C
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPV-SALKLYVCMISLGL-LPNSYTFPFLLKSC 73
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A+L A EG +HG ++K G+E D + +LI Y E + A +V+DR + + +
Sbjct: 74 AKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYT 133
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI-I 347
+L+ G S G IE A +F+ + + +S+N+MI GY G ++ LF++M ++
Sbjct: 134 ALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRP 193
Query: 348 SLNTMISVIP-----------------------------------------EME------ 360
+TM++VI EME
Sbjct: 194 DESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLF 253
Query: 361 -----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ ++WN +I GY NL+++AL L+ M + T + HAC+ LG++
Sbjct: 254 LGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAID 313
Query: 416 QGQLLHAHLVK--TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
G+ +H ++ K + + TSL+DMYS+CG I A F+S+ ++ AW A++ G
Sbjct: 314 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFG 373
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVP 532
++ HG + A +F M + +I P+ TFVG+LSAC AG+++ G IFRSM +Y + P
Sbjct: 374 FAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITP 433
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
LEHY C++DLLG SG EAEE I M +E D V+W +LL AC N+E+GE+ AQ +
Sbjct: 434 KLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNL 493
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
F ++ +YV+LSNIYA G+W + IR L +KK PGCS IE++S VH F +
Sbjct: 494 FKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIG 553
Query: 653 DRNNPNCNVIYATLEHL 669
D+ +P IY LE +
Sbjct: 554 DKFHPRNREIYGMLEEM 570
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 209/441 (47%), Gaps = 57/441 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS +T G + +ARN+FD++P++ VVSWN M+ GY + + E+L L M +
Sbjct: 129 VVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK 188
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+NV+ +E+T T++S A+ S+ G+Q+H + G+ + + L+ FY+ C E+E
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F L + + W++++ GY NL
Sbjct: 249 ACGLFLGLSYKDVISWNILIGGYTHLNLY------------------------------- 277
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK--CGFEFDESI 255
++AL LF+ M SGE+ PN+ T S++ ACA LGA G+ +H + K G S+
Sbjct: 278 -KEALLLFQEMLRSGES-PNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSL 335
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----T 311
+LI+ Y C + A +V++ + + L A N++I G GR A IF+R+
Sbjct: 336 RTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEI 395
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
+ + I++ ++ + G +D + +F M H I+ P++E + MI
Sbjct: 396 KPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKIT--------PKLEH----YGCMID 443
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFE 430
+ L ++A ++ TM ++ + L AC G+++ G+ +L K P
Sbjct: 444 LLGHSGLFKEAEEMISTM---TMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNN 500
Query: 431 SNVYVGTSLVDMYSRCGSIND 451
YV L ++Y+ G N+
Sbjct: 501 PGSYV--LLSNIYATAGRWNE 519
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 146/529 (27%), Positives = 243/529 (45%), Gaps = 50/529 (9%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A ++F+ + ++ WNTM G++ +L L M + N TF +L
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
CA+L + +G QIH VLK GYE +V + L+ Y +E+A +VFD + + +
Sbjct: 73 CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++ GY + A ++F ++P KDVV W +ISGY ++ ++AL+LF+ M ++
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVET-GNYKEALELFKEMMKTNV 191
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+E T +VI A AR G+ G+ VH + GF + I ALI+FY C + A
Sbjct: 192 R-PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETAC 250
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYG 329
++ L + + N LI G + ++A L+F + + N ++ S++ A G
Sbjct: 251 GLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLG 310
Query: 330 QVD--------DSKRLFEKMPHRSI-ISLNTMISVIPEME-----------RNPVTWNSM 369
+D KRL S+ SL M S ++E ++ WN+M
Sbjct: 311 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAM 370
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ-----LLHAHL 424
I G+ + A ++ MRK I TF L ACS G L G+ + H +
Sbjct: 371 IFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYK 430
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LG 480
+ E + G ++D+ G +A+ S+++ P+ W +L+ HG LG
Sbjct: 431 ITPKLE---HYGC-MIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELG 486
Query: 481 SE-AVLLFEI--------MLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ A LF+I +L +I A + V A +R L ++GMK
Sbjct: 487 EKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEV--ARIRGLLNDKGMK 533
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 177/572 (30%), Positives = 304/572 (53%), Gaps = 52/572 (9%)
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
++ ST+L C ++L +Q+H +++ G F+ S L + VF+
Sbjct: 26 SSISTLLKACTTTSTL---EQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNG 82
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ + +LW+ + GY + +S +FI+M + D V
Sbjct: 83 VSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAV---------------------- 120
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
P+++T+ S+I+AC+++ EG HG ++CG D + +LI+ Y
Sbjct: 121 -----------PDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYG 169
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG 324
C A +V+D + + + ++I G S + +A +F+ + E N++S+N++I G
Sbjct: 170 KCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISG 229
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEM-ERNPVTWNSMI 370
Y G + ++++F++MPHR+++S TMI V E ER+ V W+++I
Sbjct: 230 YVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALI 289
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
SGYVQN +A+++++ M + L ACS +GSL+ + + ++ K+ +
Sbjct: 290 SGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSID 349
Query: 431 SN-VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ +V +L+DM ++CGS++ A F + ++ ++ ++M G S HG G +AV LF
Sbjct: 350 VHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSR 409
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSG 548
ML + + P+ F +L+AC RAGLV+EG F SMK+ Y +VP+ +HY C+VDLLGR+G
Sbjct: 410 MLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAG 469
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L EA E +K MP+E A WGALL AC ++E+GE A ++F L+ + YV+LSN
Sbjct: 470 RLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSN 529
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWI 640
IYA +W +R ++ ++K PGCSWI
Sbjct: 530 IYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 214/481 (44%), Gaps = 52/481 (10%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
Q+ I+S + +T C ++F+ + + V WNT + GYS+ ++SL
Sbjct: 55 QDHFIIS--QFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFI 112
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M RS+ ++ T+ +++ C+++ + +G H ++ G FV + L+ Y C
Sbjct: 113 RMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCG 172
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
EI A++VFDE+ E N + W+ M+ GY + + +A +F +MP+K+ V W +ISGY K
Sbjct: 173 EILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVK 232
Query: 194 SVDGCEKALKLFRWMRESGENMP--NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
D R R+ + MP N +F ++I A+ G + V + E
Sbjct: 233 CGD--------LRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFV----FEEAPER 280
Query: 252 DESIGGALIEFYCGCEAFDGAMRVY----DRLENPCLNASNSLINGLISMGRIEDAELIF 307
D ALI Y + A++++ R P SL++ MG +E A+ +
Sbjct: 281 DVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAKWV- 339
Query: 308 NRLTEANSISYN------SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
+ +SI + ++I A G +D + +LFE+MP R +IS
Sbjct: 340 DDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLIS------------- 386
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ SM+ G + +A+ L+ M + F+V+ ACS G + +G +
Sbjct: 387 ----YCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEG-CYY 441
Query: 422 AHLVKTPF----ESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSH 476
+KT + + Y +VD+ R G + +A S+ P+ AW AL+
Sbjct: 442 FESMKTDYSIVPSPDHY--ACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKL 499
Query: 477 H 477
H
Sbjct: 500 H 500
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
T S+ S L AC+ +L+Q +HA +++ + ++ + + + + + + + F
Sbjct: 24 TTSSISTLLKACTTTSTLEQ---VHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVF 80
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+ +SSP+ W + GYS + S V LF M D VP+ T+ ++ AC + V
Sbjct: 81 NGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVK 140
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
EG+ S GV + T ++DL G+ G + A + +M E + V W A+++
Sbjct: 141 EGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMG-ERNVVSWTAMIAG 198
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 208/666 (31%), Positives = 335/666 (50%), Gaps = 58/666 (8%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L AR +FDQ + N MLCGY + ++ E+L L M N++++ + + L
Sbjct: 80 LEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKA 139
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
CA G +I ++ G E FVGS ++ F +I EA+RVFD
Sbjct: 140 CASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFD---------- 189
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESG 212
MP KDVV W +I GY ++ GC + A +LF M SG
Sbjct: 190 ---------------------GMPNKDVVCWNSIIGGYVQA--GCFDVAFQLFFEMHGSG 226
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
P+ T S+I+AC +G GK +HG ++ G D + + ++ Y + A
Sbjct: 227 IK-PSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESA 285
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS----ISYNSMIKGYAVY 328
V+ ++ L + N++I+G + G + ++ +F+RL ++ + S+++G +
Sbjct: 286 RWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQT 345
Query: 329 GQVDDSK-------RLFEK--MPHRSIISLNTMISVIPEM--------ERNPVTWNSMIS 371
+ K R FE + +I+ L + + + +RN +TW +M+
Sbjct: 346 ASLATGKILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLV 405
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
G QN E AL+L+ M++ I TF L H+C+ LGSL++G+ +H HL + F
Sbjct: 406 GLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAF 465
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
++ T+LVDMY++CG IN A+ FS S S +V W +++ GY HG G +AV ++ M
Sbjct: 466 DIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKM 525
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGH 549
+E+ + PN TF+ +LSAC + LV +G+ +F SM + + + P +HY C+VDLL R+G
Sbjct: 526 IEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGR 585
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
EA+ I+ MP + V ALLS C N+ +G + + K+ LD Y++LSNI
Sbjct: 586 FEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNI 645
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
YA +W K IR + + +KK PG S +E + VH F D ++PN IY LE L
Sbjct: 646 YAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESL 705
Query: 670 TANLNS 675
+ + +
Sbjct: 706 RSAVET 711
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 227/490 (46%), Gaps = 38/490 (7%)
Query: 99 SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLV 158
+LI K H ++ + +FV + L+ Y++ +E A+ VFD+ + LL + ML
Sbjct: 44 NLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLC 103
Query: 159 GYVQCNLMSDAFDVFIKMPKKDVVV----WTKLISGYAKSVDGCEKALKLFRWMRESGEN 214
GY+Q + ++F M +++ V T + A S+D E +++ E G
Sbjct: 104 GYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLD-YEMGMEIISSAVEKGME 162
Query: 215 MPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
N + S+I + G E +V G+ K ++ IGG Y FD A
Sbjct: 163 -KNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGG-----YVQAGCFDVAF 216
Query: 274 RVYDRLENPCLNAS----NSLINGLISMGRIEDAELIFNR---LTEANSI-SYNSMIKGY 325
+++ + + S SLI +G ++ + + L N I S + Y
Sbjct: 217 QLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMY 276
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
+ G ++ ++ +F KMP RN V+WN+MISG V+N L ++ L
Sbjct: 277 SKMGDIESARWVFYKMP-----------------TRNLVSWNAMISGCVRNGLVGESFDL 319
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ + + + +T L CS SL G++LH +++ FESN+ + T++VD+YS+
Sbjct: 320 FHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSK 378
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CGS+ A F+ + NV WTA++ G + +G +A+ LF M E+ I N+ TFV +
Sbjct: 379 CGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSL 438
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
+ +C G + G I + G + + T +VD+ + G ++ AE I D
Sbjct: 439 VHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKD 498
Query: 566 AVVWGALLSA 575
V+W ++++
Sbjct: 499 VVLWNSMITG 508
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 218/474 (45%), Gaps = 65/474 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ A+ +FD MP + VV WN+++ GY + FD + L MH S +K + T ++++
Sbjct: 179 GKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLI 238
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C + +L GK +H VL G V + + Y+ +IE A+ VF ++ N +
Sbjct: 239 QACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLV 298
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ G V+ L+ ++FD+F R +R S
Sbjct: 299 SWNAMISGCVRNGLVGESFDLF-------------------------------HRLVRSS 327
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G + T S+++ C++ + GK++HG I+ FE + + A+++ Y C +
Sbjct: 328 GGF--DLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQ 384
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMI----- 322
A V++R+++ + +++ GL G EDA +F ++ E ANS+++ S++
Sbjct: 385 ATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAH 444
Query: 323 -----KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER---------NPVTWNS 368
+G +++G + F+ + +++ + I ER + V WNS
Sbjct: 445 LGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNS 504
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-- 426
MI+GY + +A+ +Y M + + ++TF L ACS ++QG L + +
Sbjct: 505 MITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDH 564
Query: 427 --TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
P E + LVD+ SR G +AQA + P A AL++G H
Sbjct: 565 NIRPIEKHY---ACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTH 615
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 140/313 (44%), Gaps = 39/313 (12%)
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNS-----MIKGYAVYG 329
L++ N ++I+ +S+ R LI+ + T A NS+S + ++K Y+
Sbjct: 19 LKDGQFNQLPTIIHNFLSLLRESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLR 78
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY--M 387
++ ++ +F++ + + N+M+ GY+Q+ + + L+L+ M
Sbjct: 79 SLEAARYVFDQF-----------------FQPKGLLCNAMLCGYLQSGRYRETLELFGLM 121
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
R L +D TF++ AC+ + G + + V+ E N +VG+S++ + G
Sbjct: 122 RSRNLEVDSCSCTFAL--KACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFG 179
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
I +AQ F + + +V W +++ GY G A LF M I P+ T ++
Sbjct: 180 KIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQ 239
Query: 508 ACVRAGLVNEGMKIFRSMKSY----GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
AC G+ N +K+ + M Y G+ + T VD+ + G + A MP
Sbjct: 240 AC--GGIGN--LKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTR 295
Query: 564 LDAVVWGALLSAC 576
+ V W A++S C
Sbjct: 296 -NLVSWNAMISGC 307
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 37/218 (16%)
Query: 14 QETLIVSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLV 72
+ LI+ST AI + + G L A +F++M R V++W ML G ++ +++L L
Sbjct: 363 ESNLILST--AIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLF 420
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG-SGLLFFYAN 131
+ M + N TF +++ CA L SL G+ IH + + G+ F+ V + L+ YA
Sbjct: 421 AQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGF-AFDIVNMTALVDMYAK 479
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C +I A+R+F G + KDVV+W +I+GY
Sbjct: 480 CGKINLAERIFSH--------------GSIS----------------KDVVLWNSMITGY 509
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
G + A+ ++ M E G PN+ TF S++ AC+
Sbjct: 510 GMHGHGYQ-AVGIYHKMIEEGLK-PNQTTFLSLLSACS 545
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 210/663 (31%), Positives = 326/663 (49%), Gaps = 63/663 (9%)
Query: 7 QSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
QS ++T L I K ++ G G AR +FDQ+P W ML Y
Sbjct: 62 QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNK 121
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE-FVG 122
+ E + L + + + ++ FS L C +L L +GK+IHC ++K F+ V
Sbjct: 122 ESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK--VPSFDNVVL 179
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+GLL YA C EI+ A + VF + ++VV
Sbjct: 180 TGLLDMYAKCGEIKSAHK-------------------------------VFNDITLRNVV 208
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
WT +I+GY K+ D CE+ L LF MRE+ + NEYT+ ++I AC +L A +GK HG
Sbjct: 209 CWTSMIAGYVKN-DLCEEGLVLFNRMRENNV-LGNEYTYGTLIMACTKLSALHQGKWFHG 266
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
L+K G E + +L++ Y C A RV++ + L ++I G G + +
Sbjct: 267 CLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE 326
Query: 303 AELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP- 357
A +F ++ + N ++ S++ G + ++ + + I N +++
Sbjct: 327 ALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHM 386
Query: 358 ----------------EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
E E++ V WNS+ISG+ QN +AL L+ M ++ T
Sbjct: 387 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTV 446
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+ LF AC+ LGSL G LHA+ VK F S+V+VGT+L+D Y++CG A+ F +I
Sbjct: 447 ASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTI 506
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
N W+A++ GY G ++ LFE ML++ PN +TF +LSAC G+VNEG
Sbjct: 507 EEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGK 566
Query: 520 KIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
K F SM K Y P+ +HYTC+VD+L R+G L +A + I+ MPI+ D +GA L C
Sbjct: 567 KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGM 626
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
++GE +KM L S YV++SN+YA G+W + ++R + + K G S
Sbjct: 627 HSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Query: 639 WIE 641
+E
Sbjct: 687 TME 689
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 219/717 (30%), Positives = 344/717 (47%), Gaps = 86/717 (11%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLF------------------DQM 44
L S L+ Q LI ++ I CG +V +++L +
Sbjct: 10 LRTCTSSKLLKQGKLI---HQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDC 66
Query: 45 PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNETTFSTILSVCAQLNSLIDG 103
P+ V WN +L Y+ +F E+L L ++ S V+ + T+ +L C L +I G
Sbjct: 67 PL-DVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYG 125
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
++IH +LK+G FVGS L+ YA +C
Sbjct: 126 RRIHNHLLKTGLIWDVFVGSSLMNMYA-------------------------------KC 154
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENMPNEYTFD 222
+ DA +F + P++DV W +IS Y K DG E ALK F M+E G PN TF
Sbjct: 155 DQFVDAIKLFDEFPQRDVGCWNAVISCYFK--DGKAEMALKTFDKMKELGFE-PNSVTFT 211
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
V+ +C RL GK VH LI+ D + AL++ Y C + A V++++
Sbjct: 212 VVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRK 271
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEA---------NSISYNS----------MIK 323
N++I G G + R+ + SI Y S I
Sbjct: 272 NAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIH 331
Query: 324 GYAVYGQVD-----DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
GY + ++D D + + S T+ I + E V+WN MISG+V
Sbjct: 332 GYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNE--VVSWNVMISGHVMVGN 389
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
H +AL +Y M++ + TFS ACS L +L +G+ LH ++ E+N V +
Sbjct: 390 HIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGA 449
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+DMY++CG +++A+ F + ++ +WT+++ Y HG SEA+ LF+ M + ++ +
Sbjct: 450 LLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRAD 509
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
+ TF+ VLSAC AGLV+EG F M Y + P +EHY+C++DLLGR+G LHEA E +
Sbjct: 510 SVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEIL 569
Query: 558 -KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
+ D + L SAC N +G + + + +D S Y++LSN+YA + KW
Sbjct: 570 QRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASVNKW 629
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ +R+++ L +KK PGCSWIE+N R+H F ED++NP + +Y L L ++
Sbjct: 630 DEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAEDKSNPLADGVYECLNILGCHM 686
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 173/381 (45%), Gaps = 27/381 (7%)
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T S +R C +GK++H + CGF+ + + +LI FY C + A V+
Sbjct: 5 TLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTN 64
Query: 280 ENPCLNAS--NSLINGLISMGRIEDAELIFNRL-----TEANSISYNSMIKGYAVYGQVD 332
+ P L+ S N+L++ + R +A +F++L + +Y ++K G+V
Sbjct: 65 DCP-LDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVI 123
Query: 333 DSKRLFEKMPHRSII-------SLNTM----------ISVIPEM-ERNPVTWNSMISGYV 374
+R+ + +I SL M I + E +R+ WN++IS Y
Sbjct: 124 YGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYF 183
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
++ E AL+ + M++L + TF+V+ +C+ L +L++G+ +H L++ + +
Sbjct: 184 KDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAF 243
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
V ++LVDMY +CG + A+ F I N W A++ GYS G + L M ++
Sbjct: 244 VLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEG 303
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
P T ++ A R+ + G I + + + ++D + G++ AE
Sbjct: 304 TKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAE 363
Query: 555 EFIKDMPIELDAVVWGALLSA 575
+ + + + V W ++S
Sbjct: 364 TIFRTIS-KNEVVSWNVMISG 383
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 194/617 (31%), Positives = 319/617 (51%), Gaps = 69/617 (11%)
Query: 79 NVKLNETTFSTILSV--CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
N+ ++ T+L + + SL Q+H LVL+SG+ +V LL YAN
Sbjct: 23 NIPTSKLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANP---- 78
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
H N A VF +P +V +W +I G
Sbjct: 79 ---------HFSN----------------FDFALKVFSSIPNPNVFIWNIVIKG------ 107
Query: 197 GCEKALKLFRWMRESG----ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
C + KLF+ + G + PN++T+ ++ +AC+ A EG+ +HG ++K G D
Sbjct: 108 -CLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSD 166
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
I A I+ Y + A +++ E+ + N++I+G + G +E A+ +F ++
Sbjct: 167 VHIKSAGIQMYASFGRLEDARKMFYSGESDVV-CWNTMIDGYLKCGVLEAAKGLFAQMPV 225
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
N S+N MI G A G + D+++LF++M ER+ ++W+SM+ G
Sbjct: 226 KNIGSWNVMINGLAKGGNLGDARKLFDEMS-----------------ERDEISWSSMVDG 268
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
Y+ +++AL+++ M++ R S + ACS +G++ QG+ +HA+L + + +
Sbjct: 269 YISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLD 328
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
+GT+L+DMY++CG ++ F + + W A++ G + HG +A+ LF + E
Sbjct: 329 AVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQE 388
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLH 551
+ PN T VGVL+AC AG V++G++IF++M+ YGV P LEHY C+VDLLGRSG
Sbjct: 389 GRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFS 448
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
EAE+ I MP++ +A VWGALL AC N ++ ER + + L+ + YV+LSNIYA
Sbjct: 449 EAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYA 508
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
+G++ IRK + + +K PG S ++LN VH F + D ++P IY L+ +
Sbjct: 509 KVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKE 568
Query: 672 NLN--------SVVLFD 680
L S VLFD
Sbjct: 569 RLQMAGHSPDTSQVLFD 585
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 205/450 (45%), Gaps = 55/450 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +F +P V WN ++ G + K +++ M + + N+ T+ T+ C+
Sbjct: 86 ALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSV 144
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
++ +G+QIH V+K G + S + YA+ +E+A+++F E + + W+ M
Sbjct: 145 AQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTM 203
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS---------------------- 194
+ GY++C ++ A +F +MP K++ W +I+G AK
Sbjct: 204 IDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWS 263
Query: 195 --VDG------CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
VDG ++AL++F+ M+ E P + SV+ AC+ +GA +G+ VH L +
Sbjct: 264 SMVDGYISAGRYKEALEIFQQMQRE-ETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKR 322
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
+ D +G AL++ Y C D V++ ++ + N++I GL GR EDA +
Sbjct: 323 NSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALEL 382
Query: 307 FNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
F++L E N I+ ++ A G VD R+F+ M V PE+E
Sbjct: 383 FSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTM--------REFYGVDPELEH- 433
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
+ M+ ++ L +A L +M + + + L AC G+ + +
Sbjct: 434 ---YGCMVDLLGRSGLFSEAEDLINSM---PMKPNAAVWGALLGACRIHGNFDLAERVGK 487
Query: 423 HLVK-TPFESNVYVGTSLVDMYSRCGSIND 451
L++ P S YV L ++Y++ G +D
Sbjct: 488 ILLELEPQNSGRYV--LLSNIYAKVGRFDD 515
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 140/335 (41%), Gaps = 40/335 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I S N I + G L AR LFD+M R +SW++M+ GY ++ E+L + M R
Sbjct: 228 IGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQR 287
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ S++L+ C+ + ++ G+ +H + ++ + +G+ LL YA C ++
Sbjct: 288 EETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDM 347
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM------PKKDVVVWTKLISGY 191
VF+E+ E W+ M+ G DA ++F K+ P +V +
Sbjct: 348 GWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAH 407
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
A VD K L++F+ MRE P + ++ R G F E + L+ +
Sbjct: 408 AGFVD---KGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAE---DLINSMPMKP 461
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
+ ++ GAL+ GA R++ + E I L
Sbjct: 462 NAAVWGALL----------GACRIHGNFD------------------LAERVGKILLELE 493
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
NS Y + YA G+ DD ++ + M +R I
Sbjct: 494 PQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGI 528
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 185/565 (32%), Positives = 322/565 (56%), Gaps = 35/565 (6%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK-KDVVVWTKLISGYA 192
+I EA++VF+E+ + + + W+ ++ GY++C ++ +A +F + K+VV WT L+SGY
Sbjct: 81 KIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYV 140
Query: 193 KSVDGCEKALKLFRWMRESGENMP--NEYTFDSVIRACARLGAFCEGKVVHGL-LIKCGF 249
+ + E+A +LF + MP N +++++I AR +G + L L +
Sbjct: 141 RW-NRIEEARRLF-------DAMPVKNVISWNTMIEGYAR-----KGWIDQALDLFEKMP 187
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
E + +I + D A +++R+ + + +++ GL GRI+DA L+F++
Sbjct: 188 ERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDK 247
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE---MER----- 361
+ N +S+N+MI GYA ++D++ +LFE+MP R + S NTMI+ + +ER
Sbjct: 248 MPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFF 307
Query: 362 ------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACSCLGSL 414
N VTW ++ISG+VQ+ E+AL+++ M+ + TF + ACS L +L
Sbjct: 308 YKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAAL 367
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS--SISSPNVAAWTALMN 472
+GQ +H + KT ++ V ++L++MYS+CG + A+ F SI +V +W ++
Sbjct: 368 CEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIA 427
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVV 531
Y+HHG G +A+ LF+ M P+ T++ +LSAC AGLV+EG+K+F ++ + +
Sbjct: 428 AYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIK 487
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
+H+TC+VDL GR+G L EA +FIK + ++ A VW ALL+ C ++++G+ A+K
Sbjct: 488 LREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEK 547
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+ + + Y++LSNIYA GKW + +R ++ +KK PGCSWIE+ + VH F V
Sbjct: 548 LLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVV 607
Query: 652 EDRNNPNCNVIYATLEHLTANLNSV 676
D ++ IY L L + +
Sbjct: 608 GDNSHREFENIYLLLHDLHTKMKKI 632
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 214/461 (46%), Gaps = 64/461 (13%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R ++ AR LFD MP++ V+SWNTM+ GY++ D++L L M NV +++T
Sbjct: 141 RWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPERNV----VSWNT 196
Query: 90 ILSVCAQ----------LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF----------- 128
+++ Q N + + I + +G + L F
Sbjct: 197 VITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSW 256
Query: 129 ------YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
YA ++EA ++F+++ E W+ M+ G++Q + A D F KM K+VV
Sbjct: 257 NTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVV 316
Query: 183 VWTKLISGYAKSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
WT +ISG+ + DG E+ALK+F M+ + PNE TF SV+ AC++L A CEG+ +H
Sbjct: 317 TWTAVISGHVQ--DGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIH 374
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD--RLENPCLNASNSLINGLISMGR 299
++ K ++ + ALI Y C + A +++D + + + + N +I G
Sbjct: 375 QIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGH 434
Query: 300 IEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL--NTMI 353
A +F+ + ++++Y +++ + G VD+ +LFE + I L +
Sbjct: 435 GHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFT 494
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
++ R +G +Q + + ++ L + + S ++ L C+ G
Sbjct: 495 CLVDLFGR---------AGRLQ--------EAFDFIKGLEVKPSASVWAALLAGCNVHGH 537
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLV--DMYSRCGSINDA 452
+ G+L L++T E+ GT LV ++Y+ G +A
Sbjct: 538 IDLGKLTAEKLLETEPEN---AGTYLVLSNIYASTGKWREA 575
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 161/343 (46%), Gaps = 47/343 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E + S N IT +NG+L A + F +M + VV+W ++ G+ + + +E+L + S
Sbjct: 281 ERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSE 340
Query: 75 MHRSN-VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M +N VK NE TF ++L C++L +L +G+QIH ++ K+ Y+ V S L+ Y+ C
Sbjct: 341 MQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCG 400
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
E+E A+++FD+ +G+ +DVV W +I+ YA
Sbjct: 401 ELELARKIFDDGS-----------IGH------------------RDVVSWNGMIAAYAH 431
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
G KA+ LF M+ G P+ T+ +++ AC+ G EG + L++ D
Sbjct: 432 HGHG-HKAISLFDEMQALGFR-PDNVTYIALLSACSHAGLVDEGLKLFENLVR-----DR 484
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLE-------NPCLNASNSLINGLISMGRIEDAELI 306
SI F C + F A R+ + + P + +L+ G G I+ +L
Sbjct: 485 SIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLT 544
Query: 307 FNRLTEA---NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
+L E N+ +Y + YA G+ ++ + KM + +
Sbjct: 545 AEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGL 587
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 159/372 (42%), Gaps = 71/372 (19%)
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
V D N + SN LI L G+I +A +F + + + +S+ ++I GY G ++++
Sbjct: 57 VRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEA 116
Query: 335 K--------------------------------RLFEKMPHRSIISLNTMI--------- 353
K RLF+ MP +++IS NTMI
Sbjct: 117 KTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWI 176
Query: 354 ----SVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTM----------------RKL 392
+ +M ERN V+WN++I+ ++Q ++A +L+ M +
Sbjct: 177 DQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNG 236
Query: 393 AIDRTRSTF------SVLFHACSCLGSLQQGQLLHA-HLVKTPFESNVYVGTSLVDMYSR 445
ID R F +V+ +G Q +L A L + E + +++ + +
Sbjct: 237 RIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQ 296
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVG 504
G + A F +S+ NV WTA+++G+ G EA+ +F E+ ++ PN TFV
Sbjct: 297 NGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVS 356
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI-E 563
VL AC + + EG +I + + + + ++++ + G L A + D I
Sbjct: 357 VLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGH 416
Query: 564 LDAVVWGALLSA 575
D V W +++A
Sbjct: 417 RDVVSWNGMIAA 428
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 180/537 (33%), Positives = 290/537 (54%), Gaps = 25/537 (4%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
YV+C+ +S A +F MP+++VV W+ L++GY ++ + E +LF+ M PNEY
Sbjct: 67 YVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLE-VFELFKKMVVKDNIFPNEY 125
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
+ I +C + EGK HG +K G EF + + ALI+ Y C A+++ +
Sbjct: 126 VIATAISSCDS-QMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTV 184
Query: 280 ENPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
+ N ++NGL+ + +A +LI + E N+ +Y ++ + A + K
Sbjct: 185 PGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGK 244
Query: 336 RLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNSMISGYVQNN 377
++ +M I + S I +M RN V+W S+I+ Y QN
Sbjct: 245 QVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNE 304
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
E+AL L+ M I T +VLF++ + L +L G LHA K+ + NV VG
Sbjct: 305 FFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGN 364
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+L+ MY + G I AQ+ FS+++ N+ W A++ G+SHHGLG EA+ +F+ M+ P
Sbjct: 365 ALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERP 424
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
N TF+GV+ AC LV+EG F MK + +VP LEHYTC+V LL RSG L EAE F
Sbjct: 425 NYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENF 484
Query: 557 IKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
++ I D V W LL+AC+ + + G + A+ + L+ + + Y++LSN++A + +W
Sbjct: 485 MRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRW 544
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
++IRK + VKK+PG SW+E+ + H F+ ED +P N+IY ++ L + +
Sbjct: 545 DHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKI 601
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 202/474 (42%), Gaps = 68/474 (14%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFSTIL 91
++ AR LFD MP R VVSW+ ++ GY + E L M + N+ NE +T +
Sbjct: 72 EVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAI 131
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S C ++GKQ H LKSG E ++V + L+ Y+ C ++ A ++ + ++
Sbjct: 132 SSCDS-QMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIF 190
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
++L++ G +Q M++A DV KLI +G E W
Sbjct: 191 CYNLVVNGLLQHTHMAEAVDVL------------KLIIS-----EGIE-------W---- 222
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
N T+ ++ R CA L GK VH ++K + D IG ++I+ Y C
Sbjct: 223 -----NNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLS 277
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
+DRL++ + + S+I E+A +F+++ E + I N
Sbjct: 278 GRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKM-EIDCIPPNEYTMAVLFNSAA 336
Query: 332 DDSKRLFEKMPH----RSIISLNTMI------------------SVIPEME-RNPVTWNS 368
S H +S + N M+ SV M N +TWN+
Sbjct: 337 GLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNA 396
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
+I+G+ + L ++AL ++ M TF + AC+ L + +G HL+K
Sbjct: 397 IITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMK-- 454
Query: 429 FESNVYVG----TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG-YSH 476
+ + G T +V + SR G +++A+ S + +V +W L+N Y H
Sbjct: 455 -QFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVH 507
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 33/209 (15%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G +++ R FD++ R VVSW +++ Y + F+E+L+L S M + NE T +
Sbjct: 270 GKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMA 329
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+ + A L++L G Q+H KSG + VG+ L+ Y +I A+ VF +
Sbjct: 330 VLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNM--- 386
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
CN+++ W +I+G++ G E AL +F+ M
Sbjct: 387 ------------TCCNIIT----------------WNAIITGHSHHGLGKE-ALSMFQDM 417
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEG 237
+GE PN TF VI ACA L EG
Sbjct: 418 MATGER-PNYVTFIGVILACAHLKLVDEG 445
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 132/288 (45%), Gaps = 30/288 (10%)
Query: 295 ISMGRIEDAELIFN----RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
+ GR A L R ++ N + NS+I Y +V +++LF+ MP R+++S
Sbjct: 35 LKFGRTIHAHLTITNHNYRDSKVNQL--NSLINLYVKCDEVSIARKLFDSMPRRNVVS-- 90
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI-DRTRSTFSVLFHACS 409
W+++++GY+QN L+++ +K+ + D V+ A S
Sbjct: 91 ---------------WSALMAGYMQNG---NPLEVFELFKKMVVKDNIFPNEYVIATAIS 132
Query: 410 CLGSLQ--QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
S +G+ H + +K+ E + YV +L+ +YS+C + A ++ ++ +
Sbjct: 133 SCDSQMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCY 192
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
++NG H +EAV + ++++ + I N AT+V + C + G ++ M
Sbjct: 193 NLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLK 252
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + + ++D+ G+ G++ F D + V W ++++A
Sbjct: 253 SDIDCDVYIGSSIIDMYGKCGNVLSGRTFF-DRLQSRNVVSWTSIIAA 299
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 413 SLQQGQLLHAHLVKTPF---ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+L+ G+ +HAHL T +S V SL+++Y +C ++ A+ F S+ NV +W+A
Sbjct: 34 NLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSA 93
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQD-IVPNAATFVGVLSAC 509
LM GY +G E LF+ M+ +D I PN +S+C
Sbjct: 94 LMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSC 134
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 195/655 (29%), Positives = 327/655 (49%), Gaps = 76/655 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ + NK I+ RNG++ AR LFD MP R +V+WN+M+ GY + + ++ L M
Sbjct: 67 LYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMPD 126
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE--I 135
+V N +I G Y +C +
Sbjct: 127 RDV--------------VSWNLMISG-------------------------YVSCQGRWV 147
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
EE + +FDE+ E + + W+ M+ GY + M +A +F M +++VV W +++G+ ++
Sbjct: 148 EEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNG 207
Query: 196 DGCEKALKLFRWMRE----------SGENMPNEYTFDSVIRACARLGAFCEGKVVHGL-L 244
D E+A++ F M E +G E I +R +G +VH +
Sbjct: 208 D-VERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLVHAYNI 266
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
+ G+ + + A + + +DG + R E + + NS+I + I A
Sbjct: 267 LLAGYGQNGRVDKAR-QLFDQIPFYDGGQKDGGRFERNVV-SWNSMIMCYVKARDIFSAR 324
Query: 305 LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS---------- 354
++F+++ E ++IS+N+MI GY ++++ LF++MP+ ++ N+MIS
Sbjct: 325 VLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLTWNSMISGFAQKGNLEL 384
Query: 355 ------VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
IP ++N V+WNSMI+GY N ++ A +LY M R T S + C
Sbjct: 385 ARALFATIP--QKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVC 442
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAW 467
S +L G +H + KT ++ + SL+ MYSRCG+I +A+ F + V +W
Sbjct: 443 SGFAALHLGMQIHQQITKTVI-PDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISW 501
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK- 526
A++ GY+ HG ++A+ LFE+M + P TF+ VL+AC AG V EG F+SM
Sbjct: 502 NAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHFKSMAC 561
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+G+ P +EH+ +VD++GR G L EA + I MP E D VWGALL AC N+E+
Sbjct: 562 EFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGACRVHNNVELAR 621
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
AA+ + L+ + + YV+L N+YA +G+W ++R + ++K PG SW++
Sbjct: 622 VAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQPGYSWVD 676
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 213/498 (42%), Gaps = 78/498 (15%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
QE +VS N +T +NG + A F +MP R S + ++ G + + DE+ ++
Sbjct: 189 QERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRILL 248
Query: 74 TMHRSNVKLNET--TFSTILSVCAQLNSLIDGKQIHCLV------LKSG--YECFEFVGS 123
T R + + ++ +L+ Q + +Q+ + K G +E +
Sbjct: 249 TSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWN 308
Query: 124 GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
++ Y +I A+ +FD++ E + + W+ M+ GYV+ + M +A+ +F +MP D +
Sbjct: 309 SMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLT 368
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
W +ISG+A+ + E A LF + + N +++S+I G + ++
Sbjct: 369 WNSMISGFAQKGN-LELARALFATIPQK-----NLVSWNSMIAGYENNGDYKGATELYRQ 422
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN---PCLNASNSLINGLISMGRI 300
++ G + D +++ G A M+++ ++ P + +NSLI G I
Sbjct: 423 MLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIPINNSLITMYSRCGAI 482
Query: 301 EDAELIFNRLT-EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
+A IF+ + + IS+N+MI GYA +G D+ LFE
Sbjct: 483 VEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFE-------------------- 522
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
M++L + T TF + +AC+ G +++G+
Sbjct: 523 ----------------------------LMKRLKVRPTYITFISVLNACAHAGFVKEGR- 553
Query: 420 LHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSH 476
+H + F E + SLVD+ R G + +A +S+ P+ A W AL+
Sbjct: 554 MHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGACRV 613
Query: 477 HG------LGSEAVLLFE 488
H + +EA++ E
Sbjct: 614 HNNVELARVAAEALMKLE 631
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 13/176 (7%)
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
++Y + R G IN+A+A F ++ N+ W +++ GY ++A LF+ M
Sbjct: 66 DLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMP 125
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
++D+V G +S R V EG +F M V + ++ RSG +
Sbjct: 126 DRDVVSWNLMISGYVSCQGR--WVEEGRHLFDEMPERDCV----SWNTMISGYTRSGRMD 179
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ---KMFGLDKKPISAYV 604
EA + M E + V W A+++ F N +V ERA + +M D +SA V
Sbjct: 180 EALQLFDSMQ-ERNVVSWNAMVTG--FLQNGDV-ERAIEFFMRMPERDSASLSALV 231
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 210/684 (30%), Positives = 343/684 (50%), Gaps = 79/684 (11%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
+CG G + +FD++ R VSWN+++ + K++ +L M NV+ + T
Sbjct: 58 KCGDFGAVY---KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFT 114
Query: 87 FSTILSVCAQL---NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
++++ C+ L L+ GKQ+H L+ G E F+ + L+ Y ++ +K
Sbjct: 115 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSK---- 169
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+L+G +D+V W ++S ++ E AL+
Sbjct: 170 ------------VLLG---------------SFGGRDLVTWNTVLSSLCQNEQLLE-ALE 201
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES--IGGALIE 261
R M G P+E+T SV+ AC+ L GK +H +K G DE+ +G AL++
Sbjct: 202 YLREMVLEGVE-PDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVD 259
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLING-----------LISMGRIEDAELIFNRL 310
YC C+ RV+D + + + N++I G L+ +G E A L+ N
Sbjct: 260 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 319
Query: 311 TEAN---------SISYNSMIKGYAVYGQVDDSKRLFEKMP--HRSIISLNTMISVIPEM 359
T A + S I G+ V +D + + + + + ++ + + +M
Sbjct: 320 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 379
Query: 360 E-RNPVTWNSMISGYVQNNLHEKALQLYMTM----RKLAIDRTRS-------TFSVLFHA 407
E R+ VTWN+MI+GYV + HE AL L M RK++ +R T + +
Sbjct: 380 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 439
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ L +L +G+ +HA+ +K ++V VG++LVDMY++CG + ++ F I NV W
Sbjct: 440 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 499
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK- 526
++ Y HG G EA+ L +M+ Q + PN TF+ V +AC +G+V+EG++IF MK
Sbjct: 500 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 559
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD-AVVWGALLSACWFWMNMEVG 585
YGV P+ +HY CVVDLLGR+G + EA + + MP + + A W +LL A N+E+G
Sbjct: 560 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIG 619
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
E AAQ + L+ S YV+L+NIY+ G W K ++R+ + V+K+PGCSWIE
Sbjct: 620 EIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDE 679
Query: 646 VHAFSVEDRNNPNCNVIYATLEHL 669
VH F D ++P + LE L
Sbjct: 680 VHKFVAGDSSHPQSEKLSGYLETL 703
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 135/551 (24%), Positives = 235/551 (42%), Gaps = 80/551 (14%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N + G+ G+L +++ L R +V+WNT+L + + E+L + M V+
Sbjct: 153 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 212
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG-YECFEFVGSGLLFFYANCFEIEEAKR 140
+E T S++L C+ L L GK++H LK+G + FVGS L+ Y NC ++ +R
Sbjct: 213 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 272
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VFD + + LW+ M+ GY Q + D ++
Sbjct: 273 VFDGMFDRKIGLWNAMIAGYSQ-----NEHD---------------------------KE 300
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL LF M ES + N T V+ AC R GAF + +HG ++K G + D + L+
Sbjct: 301 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 360
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT--------- 311
+ Y D AMR++ ++E+ L N++I G + EDA L+ +++
Sbjct: 361 DMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 420
Query: 312 ------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------ 359
+ NSI+ +++ A + K + ++ + + S + +M
Sbjct: 421 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 480
Query: 360 ------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
++N +TWN +I Y + ++A+ L M + TF +F A
Sbjct: 481 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAA 540
Query: 408 CSCLGSLQQGQLLHAHLVKTP---FESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-- 462
CS G + +G L V P E + +VD+ R G I +A + +
Sbjct: 541 CSHSGMVDEG--LRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 598
Query: 463 NVAAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
AW++L+ H +G A I LE ++ + + S+ AGL ++
Sbjct: 599 KAGAWSSLLGASRIHNNLEIGEIAAQNL-IQLEPNVASHYVLLANIYSS---AGLWDKAT 654
Query: 520 KIFRSMKSYGV 530
++ R+MK GV
Sbjct: 655 EVRRNMKEQGV 665
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 174/427 (40%), Gaps = 62/427 (14%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE-SIGGALIEFYCGCEAFDGAMR 274
P+ Y F ++++A A L GK +H + K G+ D ++ L+ Y C F +
Sbjct: 8 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 67
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFN-------------------------- 308
V+DR+ + NSLI+ L S + E A F
Sbjct: 68 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 127
Query: 309 ---------------RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
R E NS N+++ Y G++ SK L R +
Sbjct: 128 PEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL------- 180
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
VTWN+++S QN +AL+ M ++ T S + ACS L
Sbjct: 181 ----------VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 230
Query: 414 LQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
L+ G+ LHA+ +K + N +VG++LVDMY C + + F + + W A++
Sbjct: 231 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 290
Query: 473 GYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
GYS + EA+LLF M E ++ N+ T GV+ ACVR+G + I + G+
Sbjct: 291 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 350
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
++D+ R G + A M + D V W +++ F + E K
Sbjct: 351 RDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHEDALLLLHK 409
Query: 592 MFGLDKK 598
M L++K
Sbjct: 410 MQNLERK 416
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 127/553 (22%), Positives = 217/553 (39%), Gaps = 110/553 (19%)
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEA 138
+K + F +L A L + GKQIH V K GY V + L+ Y C +
Sbjct: 6 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+VFD + E N+ V W LIS S +
Sbjct: 66 YKVFDRISERNQ-------------------------------VSWNSLISSLC-SFEKW 93
Query: 199 EKALKLFRWMRESGENM-PNEYTFDSVIRACARLG---AFCEGKVVHGLLIKCGFEFDES 254
E AL+ FR M + EN+ P+ +T SV+ AC+ L GK VH ++ G E +
Sbjct: 94 EMALEAFRCMLD--ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSF 150
Query: 255 IGGALIEFY-------------------------------CGCEAFDGAMR-----VYDR 278
I L+ Y C E A+ V +
Sbjct: 151 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 210
Query: 279 LENPCLNASNSLIN----GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
+E S+ L ++ G+ A + N + NS ++++ Y QV
Sbjct: 211 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 270
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA- 393
+R+F+ M R I WN+MI+GY QN ++AL L++ M + A
Sbjct: 271 RRVFDGMFDRKI-----------------GLWNAMIAGYSQNEHDKEALLLFIGMEESAG 313
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+ +T + + AC G+ + + +H +VK + + +V +L+DMYSR G I+ A
Sbjct: 314 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 373
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM--LEQDIV---------PNAATF 502
F + ++ W ++ GY +A+LL M LE+ + PN+ T
Sbjct: 374 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 433
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+ +L +C + +G +I + + + +VD+ + G L + + +P
Sbjct: 434 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP- 492
Query: 563 ELDAVVWGALLSA 575
+ + + W ++ A
Sbjct: 493 QKNVITWNVIIMA 505
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 6/188 (3%)
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE-SNVYVGTSLVDMYSRCGSIN 450
L I F L A + L ++ G+ +HAH+ K + +V V +LV++Y +CG
Sbjct: 4 LGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 63
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
F IS N +W +L++ A+ F ML++++ P++ T V V++AC
Sbjct: 64 AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 123
Query: 511 RAGLVNEGMKIFRSMKSYGVVP-TLEHY--TCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
+ EG+ + + + +YG+ L + +V + G+ G L ++ + D V
Sbjct: 124 NLPM-PEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLV 181
Query: 568 VWGALLSA 575
W +LS+
Sbjct: 182 TWNTVLSS 189
>gi|222616932|gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japonica Group]
Length = 841
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 206/638 (32%), Positives = 335/638 (52%), Gaps = 49/638 (7%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS N ++ +G+L AR LFD+MP R VSWNTM+ S+ + +++ L M
Sbjct: 42 VVSYNAMVSALAHHGRLAEARRLFDEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPA 101
Query: 78 SN-----------VKLNETTFSTIL-------SVCAQLNSLI-----DGKQIHCLVLKSG 114
N V+ E T + L A N++I +G+ + L
Sbjct: 102 RNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQE 161
Query: 115 YECFEFVG-SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
+ V + +L EI + + FDE+ + + + W+LML GYV+ + A F
Sbjct: 162 MPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFF 221
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
++P +V+ W L++GY ++ E A +LF M E N ++ ++ +
Sbjct: 222 SRIPSPNVISWVNLVNGYCQAGRMGE-ARELFDRMPER-----NVVAWNVLLSGYVQ--- 272
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
F + + + L I+ E + ++ + A V ++ + + A +L++G
Sbjct: 273 FSQVEAAYNLFIEMP-EKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHG 331
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+ I+DA +F+ + +++ +N+MI GY G +D++ LF++MP++ +IS NTMI
Sbjct: 332 YLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMI 391
Query: 354 -------------SVIPEMER-NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
S+ +M+R N V+WNS+ISG+VQN L +ALQ +M MR+ A
Sbjct: 392 AGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWC 451
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T++ A + L +LQ G+ H+ LV+T F S+ G +L+ Y++CG + +A+ F +
Sbjct: 452 TYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEM 511
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
++ +W AL++GY+ +G GSE + +F M + P+ T V VLSAC AGL++EG+
Sbjct: 512 VVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGL 571
Query: 520 KIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
F SM K Y + P EHYTC+VDLLGR+G L EA E ++ M I+ +A VWGALL AC
Sbjct: 572 HFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRV 631
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
N E+ AA+K+F L+ S YV+LSNI GKW
Sbjct: 632 HKNHEIAWLAAEKLFELEPCKASNYVLLSNICVEAGKW 669
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 198/495 (40%), Gaps = 98/495 (19%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
Q+ A NLF +MP + +SW TM+ G+ + K E+ ++S M NV L
Sbjct: 275 QVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYL- 333
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
+ N + D +Q+ ++ C+ + SG Y C ++EA +F ++ + +
Sbjct: 334 ---KSNLIDDARQLFDGIVVRDAVCWNTMISG----YVQCGMLDEAMVLFQQMPNKDMIS 386
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
W+ M+ G Q + A +F KM +++ V W +ISG+ ++ E AL+ F MR
Sbjct: 387 WNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVE-ALQHFMLMRRDA 445
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
++ + T+ + A A L G+ H LL++ GF D S G ALI Y C
Sbjct: 446 KS-ADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKC------ 498
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD 332
GR+ +A +F+ + + +S+N++I GYA G
Sbjct: 499 -------------------------GRMLEARQVFDEMVVQDIVSWNALIDGYASNGNGS 533
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+ +I+V EME N V + +
Sbjct: 534 E------------------VIAVFREMEANSVRPDEI----------------------- 552
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGS 448
T V+ ACS G + +G ++K P + T +VD+ R G
Sbjct: 553 -------TLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHY---TCMVDLLGRAGR 602
Query: 449 INDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
+ +A + PN W AL+ H A L E + E + A+ +V + +
Sbjct: 603 LREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFELEPC-KASNYVLLSN 661
Query: 508 ACVRAGLVNEGMKIF 522
CV AG ++ K +
Sbjct: 662 ICVEAGKWDDADKCY 676
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 143/306 (46%), Gaps = 31/306 (10%)
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
A R+++ + + + N++++ L GR+ +A +F+ + N +S+N+M+ + +G+
Sbjct: 29 AARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRRNPVSWNTMMVACSQHGR 88
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPE----------MERNP-----VTWNSMISGYVQ 375
V+D++ LF+ MP R+ S M+S ++R P +N+MISGY +
Sbjct: 89 VEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAK 148
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N E A+ L M I S L S+Q + P + ++
Sbjct: 149 NGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQ-------FFDEMP-DKDLVS 200
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
+++ Y R G ++ A A FS I SPNV +W L+NGY G EA LF+ M E+++
Sbjct: 201 WNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNV 260
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
V + +LS V+ V +F M + +T +V RSG L EA++
Sbjct: 261 V----AWNVLLSGYVQFSQVEAAYNLFIEMPEKNSI----SWTTMVSGFVRSGKLQEAKD 312
Query: 556 FIKDMP 561
+ MP
Sbjct: 313 VLSKMP 318
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 130/281 (46%), Gaps = 30/281 (10%)
Query: 309 RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP----------- 357
+LT + N + A GQ+ ++RLFE+MP R+++S N M+S +
Sbjct: 5 KLTASAVFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRL 64
Query: 358 --EM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
EM RNPV+WN+M+ Q+ E A L+ M R +++++ SC
Sbjct: 65 FDEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPA----RNEYSWTIMV---SCYVRA 117
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ L L + P E +++ Y++ G DA A + +P++ +W +++ G
Sbjct: 118 GELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGL 177
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
+ S +V F+ M ++D+V ++ +L VRAG ++ F + S P +
Sbjct: 178 IRNEEISRSVQFFDEMPDKDLV----SWNLMLEGYVRAGDLDVASAFFSRIPS----PNV 229
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ +V+ ++G + EA E MP E + V W LLS
Sbjct: 230 ISWVNLVNGYCQAGRMGEARELFDRMP-ERNVVAWNVLLSG 269
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 200/650 (30%), Positives = 339/650 (52%), Gaps = 56/650 (8%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKW-AKFDESLSLVSTMHRSNVKLNETTFSTIL 91
L A +LFD+MP T + ++T L S+ + L M R+ V+ + TF +
Sbjct: 52 HLRYALHLFDRMPPSTFL-FDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLF 110
Query: 92 S---VCAQLNSLIDGKQIHCLVLKSGYE-CFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
++ +SL+ +H L++ FV + L+ Y +A+R FDE+H
Sbjct: 111 KCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHV 170
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
+ + W++++ G + ++ D + + P +DV+ WT LI+ Y+++ + +A+ F+
Sbjct: 171 KDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRA-NRAREAVGCFKT 229
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M G P+E T +V+ ACA+L G+ +H L+ + G E++ ALI+ Y C
Sbjct: 230 MLSHG-IAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCG 288
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAV 327
F A +V+D ++GR + S+N++I GY
Sbjct: 289 DFGHAQQVFD------------------ALGRGPRPQ------------SWNAIIDGYCK 318
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
+G VD ++ LF++M R II T+NSM++GY+ + +AL L+M
Sbjct: 319 HGHVDVARSLFDEMEVRDII-----------------TFNSMMTGYIHSGQLREALLLFM 361
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
+MR+ + T L AC+ LG+LQQG+ LHA + + E+++Y+GT+L+DMY +CG
Sbjct: 362 SMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCG 421
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
+++A F + +V WTA++ G + +G+G A+ F M PN+ +++ VL+
Sbjct: 422 RVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLT 481
Query: 508 ACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
AC + L+NEG F M+ Y + P +EHY C++DLLGRSG L EA + +K MPI+ +A
Sbjct: 482 ACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNA 541
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
V+W ++LSAC ++++ + AA+ + L+ YV L NIY +W IR +
Sbjct: 542 VIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLM 601
Query: 627 THLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+VKK G S I + +VH F V D+++P I A LE ++ L S+
Sbjct: 602 EERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSL 651
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 197/417 (47%), Gaps = 23/417 (5%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
I+ + G L + L Q P+R V+SW +++ YS+ + E++ TM + +E
Sbjct: 180 ISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDE 239
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
T +LS CA+L L G+ +H LV + G E + L+ YA C + A++VFD
Sbjct: 240 VTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDA 299
Query: 145 LHE-DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
L W+ ++ GY + + A +F +M +D++ + +++GY S +AL
Sbjct: 300 LGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHS-GQLREALL 358
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
LF MR + N +T +++ ACA LGA +G+ +H + + E D +G AL++ Y
Sbjct: 359 LFMSMRRHDLRVDN-FTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMY 417
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYN 319
C D A V+ R+ ++ ++I GL G + A F ++ + NS+SY
Sbjct: 418 MKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYI 477
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
+++ + +++ + F++M + ++ P++E + MI ++ L
Sbjct: 478 AVLTACSHSCLLNEGRLYFDEM--------RILYNIHPQIEH----YGCMIDLLGRSGLL 525
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYV 435
++A+ L TM I ++ + AC + Q HL+K P E VYV
Sbjct: 526 DEAMDLVKTM---PIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYV 579
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 33/220 (15%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N I ++G + AR+LFD+M +R ++++N+M+ GY + E+L L +M R +
Sbjct: 308 SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHD 367
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
++++ T +L+ CA L +L G+ +H + + E ++G+ LL Y C ++EA
Sbjct: 368 LRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEAT 427
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VF +M K+DV WT +I+G A + G +
Sbjct: 428 IVFQ-------------------------------RMGKRDVHTWTAMIAGLAFNGMG-K 455
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
AL+ F MR G PN ++ +V+ AC+ EG++
Sbjct: 456 AALEHFYQMRCDGFQ-PNSVSYIAVLTACSHSCLLNEGRL 494
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 218/717 (30%), Positives = 342/717 (47%), Gaps = 106/717 (14%)
Query: 24 AITECGRNGQLVTARNLFDQMPIR-TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL 82
A ECG + + V+ L +P TV WN ++ K D++L M R
Sbjct: 68 AYIECGASAEAVSL--LQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
+ TF +L C ++ SL G +H +V +G F+ + ++ Y C +++A ++F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185
Query: 143 DELHE---DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
DE+ E ++ + W+ +L YVQ A + +M G
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRM--------------------GNH 225
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+LKL P+ T +++ ACA + A GK VHG ++ G D +G AL
Sbjct: 226 YSLKL----------RPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNAL 275
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----S 315
+ Y C + A +V++ ++ + + N+++ G +G + A +F + E +
Sbjct: 276 VSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDV 335
Query: 316 ISYNSMIKGYAVYG---QVDDSKR---------------------------LFEKMPH-- 343
I+++++I GYA G + D R L+ K H
Sbjct: 336 ITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAY 395
Query: 344 --RSIISLN----------------------------TMISVIPEMERNPVTWNSMISGY 373
++I++LN ++ I ++N VTW MI GY
Sbjct: 396 VIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGY 455
Query: 374 VQNNLHEKALQLYMTM--RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
Q+ AL+L+ + +K ++ T S AC+ LG L+ G+ LHA+ ++ ES
Sbjct: 456 AQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENES 515
Query: 432 NV-YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
V YVG L+DMYS+ G I+ A+A F ++ NV +WT+LM GY HG G EA+ LF+ M
Sbjct: 516 EVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQM 575
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGH 549
+ + TF+ VL AC +G+V++GM F M K +G+ P EHY C+VDLLGR+G
Sbjct: 576 QKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGR 635
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
L+EA E IK+M +E AVVW ALLSA N+E+GE AA K+ L + +Y +LSN+
Sbjct: 636 LNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNL 695
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
YA +W IR + H ++K PGCSWI+ F V DR++P IY L
Sbjct: 696 YANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLL 752
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 234/506 (46%), Gaps = 54/506 (10%)
Query: 22 NKAITECGRNGQLVTARNLFDQM---PIRTVVSWNTMLCGYSKWAKFDESLSLVSTM--H 76
N + GR G L A +FD++ I +VSWN++L Y + + +L + M H
Sbjct: 166 NSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNH 225
Query: 77 RS-NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
S ++ + T IL CA + +L GKQ+H +++G FVG+ L+ YA C ++
Sbjct: 226 YSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKM 285
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGY 191
EA +VF+ + + + + W+ M+ GY Q A +F M K DV+ W+ +I+GY
Sbjct: 286 NEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGY 345
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF-- 249
A+ G E AL +FR M+ G PN T S++ CA +GA GK H +IK
Sbjct: 346 AQKGHGFE-ALDVFRQMQLYGLE-PNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNL 403
Query: 250 -----EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIED 302
E D + LI+ Y C+++ A ++D +E N +I G G D
Sbjct: 404 NWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEAND 463
Query: 303 AELIFNRL------TEANSISYNSMIKGYAVYGQVDDSKRLFE---KMPHRSII------ 347
A +F ++ + N+ + + + A G++ ++L + + S +
Sbjct: 464 ALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNC 523
Query: 348 ---------SLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
++ +V M+ RN V+W S+++GY + E+AL L+ M+KL
Sbjct: 524 LIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVD 583
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDAQ 453
TF V+ +ACS G + QG + +VK TP + +VD+ R G +N+A
Sbjct: 584 GITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHY---ACMVDLLGRAGRLNEAM 640
Query: 454 ASFSSIS-SPNVAAWTALMNGYSHHG 478
++S P W AL++ H
Sbjct: 641 ELIKNMSMEPTAVVWVALLSASRIHA 666
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 205/675 (30%), Positives = 330/675 (48%), Gaps = 91/675 (13%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+L+A + +T + + S K IT ++ L A +FD++ + + SWN ML GYS
Sbjct: 55 QLHARIVLSSLTPDNFLAS--KLITFYSKSNHLYEAHKVFDKILDKNIFSWNAMLIGYSI 112
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSL----IDGKQIHCLVLKSGYEC 117
+L+L+S++ S + TI V L+ L I K++ C VL+ G++
Sbjct: 113 HNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLFPDSILAKEVQCFVLRHGFDS 172
Query: 118 FEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
FV + L+ +Y+ C E A+ +FD +H+
Sbjct: 173 DIFVVNALITYYSRCDEYGIARILFDRMHD------------------------------ 202
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+D+V W +I+GY++ E +L+R M +S PN T SV++ACA+ G
Sbjct: 203 -RDIVSWNSMIAGYSQG-GFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFG 260
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
VH +I+ E D S +LI Y C
Sbjct: 261 MKVHQFIIERKVEMDVSAHNSLIGLYAKC------------------------------- 289
Query: 298 GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
G ++ A +FN ++ + ++Y S++ GY +G VD + LF +M
Sbjct: 290 GSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREM---------------- 333
Query: 358 EMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
+NP TWN++ISG VQNN +E L+L M++ T S + SC +L+
Sbjct: 334 ---KNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLK 390
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G+ +HA+ ++ + N+YV TS++D Y++ G + AQ F ++ WTA+++ YS
Sbjct: 391 GGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYS 450
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTL 534
HG + A+ LF ML P+ TF VL+AC +G+VNE KIF M YG P +
Sbjct: 451 AHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQPCV 510
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY C+V +L R+G L EA EFI MPIE +A VWGALL+ ++E+G+ +F
Sbjct: 511 EHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHLFN 570
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
++ + YVI++N+Y+ G+W + +IR+++ + +KK PG SWIE + + +F D
Sbjct: 571 MEPENTGNYVIMANLYSQAGRWEEAENIREKMKKIGLKKIPGTSWIETSGGLRSFIARDV 630
Query: 655 NNPNCNVIYATLEHL 669
++ IY LE L
Sbjct: 631 SSERSEEIYGMLEGL 645
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
F L CS L+Q + LHA +V + + ++ + L+ YS+ + +A F I
Sbjct: 36 AFGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKI 95
Query: 460 SSPNVAAWTALMNGYSHHGL 479
N+ +W A++ GYS H +
Sbjct: 96 LDKNIFSWNAMLIGYSIHNM 115
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 204/756 (26%), Positives = 362/756 (47%), Gaps = 140/756 (18%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
++A ++ ++ +T + +N+ I + + +R LFDQMP R + +WN +L Y K
Sbjct: 27 IHAHMLRSRLSDDTFL--SNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKA 84
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTIL--SVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
++ +++ L + M N+ T S + C L + G++ H + +K G + +
Sbjct: 85 SELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRCHGISIKIGLDNNIY 144
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
VG+ LL YA +C + DA F +P+ +
Sbjct: 145 VGNALLGMYA-------------------------------KCRCIGDAIQAFGDVPEPN 173
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACAR---------- 230
V +T ++ G A S D +A +LFR M + ++ + + SV+ C+R
Sbjct: 174 EVSFTAMMGGLADS-DQVNEAFRLFRLMLRNRIHV-DSVSLSSVLGVCSRGGCGEFGLHD 231
Query: 231 ----LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
L + G+ VH L IK GFE D + +L++ Y D A ++ + + +
Sbjct: 232 SNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVS 291
Query: 287 SNSLINGL-----------------------------------ISMGRIEDAELIFNRLT 311
N +I G I G IE +F+ ++
Sbjct: 292 WNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS 351
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI----ISLNTMISVIPEM-------- 359
+ S+N+++ GY+ ++ +LF +M RS+ +L ++S + M
Sbjct: 352 SPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQ 411
Query: 360 -----------------------------------------ERNPVTWNSMISGYVQNNL 378
E + V WNSM++G N+L
Sbjct: 412 VHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSL 471
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
++A + MR+ + ++ +++ + C+ L SL QG+ +H+ + + + ++ +VG++
Sbjct: 472 DKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSA 531
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+DMYS+CG ++ A+ F + N W +++GY+ +G G EAVLL+E M+ P+
Sbjct: 532 LIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPD 591
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
TFV VL+AC +GLV+ G+KIF SM+ +GV P ++HYTC++D LGR+G LHEAE I
Sbjct: 592 GITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLI 651
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
MP + D ++W LLS+C + ++ + RAA+++F LD + + YV+L+NIY+ LG+W
Sbjct: 652 DKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWD 711
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
+R+ +++ +V KDPG SWIE + + AF V+D
Sbjct: 712 DAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFMVDD 747
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 218/501 (43%), Gaps = 51/501 (10%)
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
T +++L C + + GK IH +L+S F+ + L+ FYA C I+ ++R+FD+
Sbjct: 6 TYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQ 65
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ + + W+ +L Y + + + DA +F +MP++++V W LIS ++
Sbjct: 66 MPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRN---------- 115
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
AC L G+ HG+ IK G + + +G AL+ Y
Sbjct: 116 ---------------------GACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYA 154
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF-----NRLTEANSISYN 319
C A++ + + P + +++ GL ++ +A +F NR+ +S+S +
Sbjct: 155 KCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRI-HVDSVSLS 213
Query: 320 SMI-----KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
S++ G +G D + L + + + L ++ N NS++ Y
Sbjct: 214 SVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLN----NSLLDMYA 269
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
+N + A +++ M ++++ + +++ Q + H FE +
Sbjct: 270 KNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYH----GFEPDEI 325
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+++ + G I + F +SSP++++W +++GYS + EAV LF M +
Sbjct: 326 TYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRS 385
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
+ P+ T +LS+ L+ G ++ + + + ++ + + G + A+
Sbjct: 386 VHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAK 445
Query: 555 EFIKDMPIELDAVVWGALLSA 575
I D ELD V W ++++
Sbjct: 446 R-IFDRIAELDIVCWNSMMAG 465
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 213/687 (31%), Positives = 344/687 (50%), Gaps = 85/687 (12%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTM---LCGYSKWAKFDESLSLVSTMHRSNVKLN 83
+CG G + +FD++ R VSWN++ LC + KW + +L M NV+ +
Sbjct: 145 KCGDFGAVY---KVFDRISERNQVSWNSLISSLCSFEKW---EMALEAFRCMLDENVEPS 198
Query: 84 ETTFSTILSVCAQL---NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
T ++++ C+ L L+ GKQ+H L+ G E F+ + L+ Y ++ +K
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSK- 256
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+L+G +D+V W ++S ++ E
Sbjct: 257 ---------------VLLG---------------SFGGRDLVTWNTVLSSLCQNEQLLE- 285
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES--IGGA 258
AL+ R M G P+E+T SV+ AC+ L GK +H +K G DE+ +G A
Sbjct: 286 ALEYLREMVLEGVE-PDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSA 343
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING-----------LISMGRIEDAELIF 307
L++ YC C+ RV+D + + + N++I G L+ +G E A L+
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 308 NRLTEAN---------SISYNSMIKGYAVYGQVDDSKRLFEKMP--HRSIISLNTMISVI 356
N T A + S I G+ V +D + + + + + ++ + +
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 357 PEME-RNPVTWNSMISGYVQNNLHEKALQLYMTM----RKLAIDRTRS-------TFSVL 404
+ME R+ VTWN+MI+GYV + HE AL L M RK++ +R T +
Sbjct: 464 GKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTI 523
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
+C+ L +L +G+ +HA+ +K ++V VG++LVDMY++CG + ++ F I NV
Sbjct: 524 LPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNV 583
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
W ++ Y HG G EA+ L +M+ Q + PN TF+ V +AC +G+V+EG++IF
Sbjct: 584 ITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYV 643
Query: 525 MK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD-AVVWGALLSACWFWMNM 582
MK YGV P+ +HY CVVDLLGR+G + EA + + MP + + A W +LL A N+
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL 703
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
E+GE AAQ + L+ S YV+L+NIY+ G W K ++R+ + V+K+PGCSWIE
Sbjct: 704 EIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEH 763
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHL 669
VH F D ++P + LE L
Sbjct: 764 GDEVHKFVAGDSSHPQSEKLSGYLETL 790
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 135/551 (24%), Positives = 235/551 (42%), Gaps = 80/551 (14%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N + G+ G+L +++ L R +V+WNT+L + + E+L + M V+
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG-YECFEFVGSGLLFFYANCFEIEEAKR 140
+E T S++L C+ L L GK++H LK+G + FVGS L+ Y NC ++ +R
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VFD + + LW+ M+ GY Q + D ++
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQ-----NEHD---------------------------KE 387
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL LF M ES + N T V+ AC R GAF + +HG ++K G + D + L+
Sbjct: 388 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT--------- 311
+ Y D AMR++ ++E+ L N++I G + EDA L+ +++
Sbjct: 448 DMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 312 ------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------ 359
+ NSI+ +++ A + K + ++ + + S + +M
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567
Query: 360 ------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
++N +TWN +I Y + ++A+ L M + TF +F A
Sbjct: 568 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAA 627
Query: 408 CSCLGSLQQGQLLHAHLVKTP---FESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-- 462
CS G + +G L V P E + +VD+ R G I +A + +
Sbjct: 628 CSHSGMVDEG--LRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 685
Query: 463 NVAAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
AW++L+ H +G A I LE ++ + + S+ AGL ++
Sbjct: 686 KAGAWSSLLGASRIHNNLEIGEIAAQNL-IQLEPNVASHYVLLANIYSS---AGLWDKAT 741
Query: 520 KIFRSMKSYGV 530
++ R+MK GV
Sbjct: 742 EVRRNMKEQGV 752
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 174/427 (40%), Gaps = 62/427 (14%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE-SIGGALIEFYCGCEAFDGAMR 274
P+ Y F ++++A A L GK +H + K G+ D ++ L+ Y C F +
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFN-------------------------- 308
V+DR+ + NSLI+ L S + E A F
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 309 ---------------RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
R E NS N+++ Y G++ SK L R +
Sbjct: 215 PEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL------- 267
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
VTWN+++S QN +AL+ M ++ T S + ACS L
Sbjct: 268 ----------VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 414 LQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
L+ G+ LHA+ +K + N +VG++LVDMY C + + F + + W A++
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 473 GYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
GYS + EA+LLF M E ++ N+ T GV+ ACVR+G + I + G+
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
++D+ R G + A M + D V W +++ F + E K
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 592 MFGLDKK 598
M L++K
Sbjct: 497 MQNLERK 503
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 127/553 (22%), Positives = 217/553 (39%), Gaps = 110/553 (19%)
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEA 138
+K + F +L A L + GKQIH V K GY V + L+ Y C +
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+VFD + E N+ V W LIS S +
Sbjct: 153 YKVFDRISERNQ-------------------------------VSWNSLISSLC-SFEKW 180
Query: 199 EKALKLFRWMRESGENM-PNEYTFDSVIRACARLG---AFCEGKVVHGLLIKCGFEFDES 254
E AL+ FR M + EN+ P+ +T SV+ AC+ L GK VH ++ G E +
Sbjct: 181 EMALEAFRCMLD--ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSF 237
Query: 255 IGGALIEFY-------------------------------CGCEAFDGAMR-----VYDR 278
I L+ Y C E A+ V +
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 279 LENPCLNASNSLIN----GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
+E S+ L ++ G+ A + N + NS ++++ Y QV
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA- 393
+R+F+ M R I WN+MI+GY QN ++AL L++ M + A
Sbjct: 358 RRVFDGMFDRKI-----------------GLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+ +T + + AC G+ + + +H +VK + + +V +L+DMYSR G I+ A
Sbjct: 401 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM--LEQDIV---------PNAATF 502
F + ++ W ++ GY +A+LL M LE+ + PN+ T
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+ +L +C + +G +I + + + +VD+ + G L + + +P
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP- 579
Query: 563 ELDAVVWGALLSA 575
+ + + W ++ A
Sbjct: 580 QKNVITWNVIIMA 592
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 6/226 (2%)
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
S+ R+P W ++ V++NL +A+ Y+ M L I F L A + L
Sbjct: 53 SIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQD 112
Query: 414 LQQGQLLHAHLVKTPFE-SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
++ G+ +HAH+ K + +V V +LV++Y +CG F IS N +W +L++
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
A+ F ML++++ P++ T V V++AC + EG+ + + + +YG+
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRK 231
Query: 533 -TLEHY--TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
L + +V + G+ G L ++ + D V W +LS+
Sbjct: 232 GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSS 276
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 195/637 (30%), Positives = 314/637 (49%), Gaps = 92/637 (14%)
Query: 68 SLSLVSTMHRSNVKLNETTF--STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
S ++V M+R L +F +L C + L+ KQ+H ++KS E V + L
Sbjct: 10 SEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNL 69
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
L Y C ++EA+ VFD L + + W+ M+ GYV+ D
Sbjct: 70 LHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAED----------------- 112
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
A++LFR M G PN T+ +++ACA L A GK VH +
Sbjct: 113 ---------------AMRLFREMCHEGVQ-PNAGTYMIILKACASLSALKWGKEVHACIR 156
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
G E D +G AL+ Y C + + A R++D L N + + +I G ++A
Sbjct: 157 HGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYR 216
Query: 306 IFNRLTE----ANSISY-----------------------------------NSMIKGYA 326
+ ++ + N+I+Y ++++ YA
Sbjct: 217 LMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYA 276
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G +DD++ +F++M R ++S WN MI + ++ +A L+
Sbjct: 277 KSGSIDDARVVFDRMKVRDVVS-----------------WNVMIGAFAEHGRGHEAYDLF 319
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
+ M+ F + +AC+ G+L+ + +H H + + E +V VGT+LV MYS+
Sbjct: 320 LQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKS 379
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
GSI+DA+ F + NV +W A+++G + HGLG +A+ +F M + P+ TFV VL
Sbjct: 380 GSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVL 439
Query: 507 SACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
SAC AGLV+EG + +M + YG+ P + H C+VDLLGR+G L EA+ FI +M ++ D
Sbjct: 440 SACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPD 499
Query: 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKR 625
WGALL +C + N+E+GE A++ LD K + YV+LSNIYA GKW +R
Sbjct: 500 EATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTM 559
Query: 626 LTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
+ ++K+PG SWIE+++++H F V D ++P C I
Sbjct: 560 MRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEI 596
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 230/501 (45%), Gaps = 61/501 (12%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
ECGR L AR +FD + ++ SWN M+ GY + ++++ L M V+ N T
Sbjct: 75 ECGR---LQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGT 131
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+ IL CA L++L GK++H + G E VG+ LL Y C I EA+R+FD L
Sbjct: 132 YMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLM 191
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ + W++M+ Y Q +A+ + ++M ++ G+
Sbjct: 192 NHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQE----------GFK-------------- 227
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
PN T+ S++ ACA GA K VH + G E D +G AL++ Y
Sbjct: 228 ---------PNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKS 278
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEA---NSISYNSMI 322
+ D A V+DR++ + + N +I GR +A +L TE ++I + S++
Sbjct: 279 GSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSIL 338
Query: 323 KGYAVYGQVDDSKRLFE-------KMPHRSIISLNTMIS----------VIPEME-RNPV 364
A G ++ K++ ++ R +L M S V M+ RN V
Sbjct: 339 NACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVV 398
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+WN+MISG Q+ L + AL+++ M + R TF + ACS G + +G+ + +
Sbjct: 399 SWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAM 458
Query: 425 VKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSE 482
+ E +V +VD+ R G + +A+ +++ P+ A W AL+ +G
Sbjct: 459 TQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVEL 518
Query: 483 AVLLFEIMLEQDIVPNAATFV 503
L+ + L+ D NAAT+V
Sbjct: 519 GELVAKERLKLD-PKNAATYV 538
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 207/676 (30%), Positives = 330/676 (48%), Gaps = 57/676 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N + G+ G L AR FD M +R+VVSW M+ GYS+ + ++++ + M R
Sbjct: 115 LVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLR 174
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S ++ TF +I+ C + G Q+H V+KSGY+ + L+ Y +I
Sbjct: 175 SGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAH 234
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A DVF + KD++ W +I+G+ + G
Sbjct: 235 AS-------------------------------DVFTMISTKDLISWASMITGFTQL--G 261
Query: 198 CE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E +AL LFR M G PNE+ F SV AC L G+ + G+ K G + G
Sbjct: 262 YEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAG 321
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL---------------ISMGRIE 301
+L + Y A R + ++E+P L + N++I L I MG +
Sbjct: 322 CSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSDVNEAIYFFCQMIHMGLMP 381
Query: 302 DAELIFNRLTEANS---ISYNSMIKGYAVYGQVDDSKRLFEKM--PHRSIISLNTMISVI 356
D N L S ++ I Y + +D + + + +L+ +V
Sbjct: 382 DDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVF 441
Query: 357 PEMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
++ N V+WN+++S Q+ +A +L+ M T + + C+ L SL
Sbjct: 442 KDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSL 501
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ G +H VK+ +V V L+DMY++CG + A+ F S +P++ +W++L+ GY
Sbjct: 502 EVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGY 561
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPT 533
+ GLG EA+ LF +M + PN T++GVLSAC GLV EG ++ +M+ G+ PT
Sbjct: 562 AQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPT 621
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
EH +C+VDLL R+G L+EAE FIK + D +W LL++C N+++ ERAA+ +
Sbjct: 622 REHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENIL 681
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
LD +A V+LSNI+A G W + +R + + V+K PG SWIE+ ++H F ED
Sbjct: 682 KLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSED 741
Query: 654 RNNPNCNVIYATLEHL 669
++P IY LE L
Sbjct: 742 SSHPQRGNIYTMLEDL 757
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 208/502 (41%), Gaps = 112/502 (22%)
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
+ S+++L +T+ ++ C + SL GK+IH +LKS + + + +L Y C
Sbjct: 71 LKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGS 130
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+++A++ FD + + + W++M+ GY Q +DA ++I+M L SGY
Sbjct: 131 LKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQM----------LRSGY--- 177
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
P++ TF S+I+AC G G +HG +IK G++
Sbjct: 178 --------------------FPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHH-- 215
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
L A N+LI+ G+I A +F ++ +
Sbjct: 216 -----------------------------LIAQNALISMYTKFGQIAHASDVFTMISTKD 246
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
IS+ SMI G+ G ++ LF M + + N I
Sbjct: 247 LISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFI--------------------- 285
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
F +F AC L + G+ + K NV+
Sbjct: 286 --------------------------FGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVF 319
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
G SL DMY++ G + A+ +F I SP++ +W A++ ++ + +EA+ F M+
Sbjct: 320 AGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSDV-NEAIYFFCQMIHMG 378
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
++P+ TF+ +L AC +N+GM+I + G+ ++ + + +LH+A
Sbjct: 379 LMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAF 438
Query: 555 EFIKDMPIELDAVVWGALLSAC 576
KD+ + V W A+LSAC
Sbjct: 439 NVFKDISENGNLVSWNAILSAC 460
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 112/210 (53%), Gaps = 2/210 (0%)
Query: 367 NSMISGYVQNNLHEKALQLY-MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
NS I+ + + +AL + ++ +I ST+ L AC+ + SL+ G+ +H H++
Sbjct: 48 NSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHIL 107
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K+ + ++ + +++MY +CGS+ DA+ +F ++ +V +WT +++GYS +G ++A++
Sbjct: 108 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAII 167
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
++ ML P+ TF ++ AC AG ++ G ++ + G L ++ +
Sbjct: 168 MYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYT 227
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G + A + + + D + W ++++
Sbjct: 228 KFGQIAHASDVFTMISTK-DLISWASMITG 256
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 292/536 (54%), Gaps = 26/536 (4%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNE 218
Y + N +S A ++F +MP+++VV W+ L++GY ++G K ++L + M G PNE
Sbjct: 76 YAKVNQVSIAHNLFDRMPERNVVSWSALMTGYL--LNGFSLKVIRLLKDMISEGNVSPNE 133
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
Y I +C G EG+ HGLL+K GF F + AL+ Y C AM V++
Sbjct: 134 YILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNE 193
Query: 279 LENPCLNASNSLINGLISMGRIEDA----------ELIFNRLTEANSISYNSMIK----G 324
+ + A NS+++ L+ G + + + ++++T N+ S + +K G
Sbjct: 194 VPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLG 253
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISL------NTMISVIPE--MERNPVTWNSMISGYVQN 376
V+G++ S + +II++ + M + + RN V W ++++ QN
Sbjct: 254 LHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQN 313
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
E+AL L+ M + + T++VL +AC+ L + + G LLH H K+ F+ +V VG
Sbjct: 314 GCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVG 373
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+L++MY++ G I A+ FS + ++ W A++ G+SHHGLG +A+L+F+ ML +
Sbjct: 374 NALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEH 433
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
PN TF GVLSAC GLV EG MK +GV P LEHYTC+V LL ++G L+EA
Sbjct: 434 PNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARN 493
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
F++ P++ D V W LL+AC N +G A+ + +D + Y +LSNIYA +
Sbjct: 494 FMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKR 553
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
W + +RK + ++KK+PG SWIE+ + H F+ ED +P+ Y ++ L A
Sbjct: 554 WDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLA 609
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 129/543 (23%), Positives = 226/543 (41%), Gaps = 100/543 (18%)
Query: 10 TLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL 69
T E I+ N I + Q+ A NLFD+MP R VVSW+ ++ GY + +
Sbjct: 58 TSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVI 117
Query: 70 SLVSTM-HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
L+ M NV NE + +S C + +G+Q H L+LK+G+ +V + L+
Sbjct: 118 RLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSM 177
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
Y+ C +++A V++E+ ++ + ++ +L V+ + + +V M + V
Sbjct: 178 YSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESV------- 230
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
+W ++ TF + CA L G VHG ++
Sbjct: 231 -----------------KW---------DKVTFVNAFSLCASLKDLRLGLHVHGKMLTSD 264
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
E D + A+I Y C A V+D L++ + +++ G E+A +F+
Sbjct: 265 VECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFS 324
Query: 309 RLTE----ANSISY-----------------------------------NSMIKGYAVYG 329
++ + +N +Y N++I YA G
Sbjct: 325 KMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSG 384
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
++ +K++F M HR II TWN+MI G+ + L +KAL ++ M
Sbjct: 385 DIEAAKKVFSDMMHRDII-----------------TWNAMICGFSHHGLGKKALLVFQDM 427
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGS 448
TF+ + AC LG +Q+G HL+K + + T +V + S+ G
Sbjct: 428 LAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQ 487
Query: 449 INDAQASFSSISSP-NVAAWTALMNG---YSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+N+A+ + +V AW L+N + ++GLG + E +LE D PN
Sbjct: 488 LNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGR---WVAEFVLEMD--PNDVGTYT 542
Query: 505 VLS 507
+LS
Sbjct: 543 LLS 545
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 134/285 (47%), Gaps = 20/285 (7%)
Query: 295 ISMGRIEDAELIF-NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+ +G+ + LI +R TE + I NS+I YA QV + LF++MP
Sbjct: 45 LKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMP----------- 93
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLG 412
ERN V+W+++++GY+ N K ++L M + + ++ +C G
Sbjct: 94 ------ERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRG 147
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+++G+ H L+KT F + YV +LV MYS+C + DA ++ + ++ A+ ++++
Sbjct: 148 RVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILS 207
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
+G E + + M+ + + + TFV S C + G+ + M + V
Sbjct: 208 SLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVEC 267
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
+ ++++ G+ G A + + V+W A++++C+
Sbjct: 268 DAYVSSAIINMYGKCGKSLMARGVFDGLQ-SRNVVLWTAVMASCF 311
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 39/248 (15%)
Query: 413 SLQQGQLLHAHLVKT--PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
+L+ G+ +H+HL+ T E+++ SL++ Y++ ++ A F + NV +W+AL
Sbjct: 44 NLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSAL 103
Query: 471 MNGYSHHGLGSEAVLLFEIML-EQDIVPNAATFVGVLSACVRAGLVNEGMK--------- 520
M GY +G + + L + M+ E ++ PN +S+C G V EG +
Sbjct: 104 MTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTG 163
Query: 521 --------------------IFRSMKSYGVVPT--LEHYTCVVDLLGRSGHLHEAEEFIK 558
+ +M + VP + Y ++ L +G+L E E ++
Sbjct: 164 FSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLR 223
Query: 559 DM---PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
M ++ D V + S C ++ +G KM D + AYV S I + GK
Sbjct: 224 SMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVE-CDAYVS-SAIINMYGK 281
Query: 616 WGKKMDIR 623
GK + R
Sbjct: 282 CGKSLMAR 289
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 213/687 (31%), Positives = 344/687 (50%), Gaps = 85/687 (12%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTM---LCGYSKWAKFDESLSLVSTMHRSNVKLN 83
+CG G + +FD++ R VSWN++ LC + KW + +L M NV+ +
Sbjct: 145 KCGDFGAVY---KVFDRISERNQVSWNSLISSLCSFEKW---EMALEAFRCMLDENVEPS 198
Query: 84 ETTFSTILSVCAQL---NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
T ++++ C+ L L+ GKQ+H L+ G E F+ + L+ Y ++ +K
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSK- 256
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+L+G +D+V W ++S ++ E
Sbjct: 257 ---------------VLLG---------------SFGGRDLVTWNTVLSSLCQNEQLLE- 285
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES--IGGA 258
AL+ R M G P+E+T SV+ AC+ L GK +H +K G DE+ +G A
Sbjct: 286 ALEYLREMVLEGVE-PDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSA 343
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING-----------LISMGRIEDAELIF 307
L++ YC C+ RV+D + + + N++I G L+ +G E A L+
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 308 NRLTEAN---------SISYNSMIKGYAVYGQVDDSKRLFEKMP--HRSIISLNTMISVI 356
N T A + S I G+ V +D + + + + + ++ + +
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 357 PEME-RNPVTWNSMISGYVQNNLHEKALQLYMTM----RKLAIDRTRS-------TFSVL 404
+ME R+ VTWN+MI+GYV + HE AL L M RK++ +R T +
Sbjct: 464 GKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTI 523
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
+C+ L +L +G+ +HA+ +K ++V VG++LVDMY++CG + ++ F I NV
Sbjct: 524 LPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNV 583
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
W ++ Y HG G EA+ L +M+ Q + PN TF+ V +AC +G+V+EG++IF
Sbjct: 584 ITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYV 643
Query: 525 MK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD-AVVWGALLSACWFWMNM 582
MK YGV P+ +HY CVVDLLGR+G + EA + + MP + + A W +LL A N+
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL 703
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
E+GE AAQ + L+ S YV+L+NIY+ G W K ++R+ + V+K+PGCSWIE
Sbjct: 704 EIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEH 763
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHL 669
VH F D ++P + LE L
Sbjct: 764 GDEVHKFVAGDSSHPQSEKLSGYLETL 790
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 135/551 (24%), Positives = 235/551 (42%), Gaps = 80/551 (14%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N + G+ G+L +++ L R +V+WNT+L + + E+L + M V+
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG-YECFEFVGSGLLFFYANCFEIEEAKR 140
+E T S++L C+ L L GK++H LK+G + FVGS L+ Y NC ++ +R
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VFD + + LW+ M+ GY Q + D ++
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQ-----NEHD---------------------------KE 387
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL LF M ES + N T V+ AC R GAF + +HG ++K G + D + L+
Sbjct: 388 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT--------- 311
+ Y D AMR++ ++E+ L N++I G + EDA L+ +++
Sbjct: 448 DMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 312 ------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------ 359
+ NSI+ +++ A + K + ++ + + S + +M
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567
Query: 360 ------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
++N +TWN +I Y + ++A+ L M + TF +F A
Sbjct: 568 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAA 627
Query: 408 CSCLGSLQQGQLLHAHLVKTP---FESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-- 462
CS G + +G L V P E + +VD+ R G I +A + +
Sbjct: 628 CSHSGMVDEG--LRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 685
Query: 463 NVAAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
AW++L+ H +G A I LE ++ + + S+ AGL ++
Sbjct: 686 KAGAWSSLLGASRIHNNLEIGEIAAQNL-IQLEPNVASHYVLLANIYSS---AGLWDKAT 741
Query: 520 KIFRSMKSYGV 530
++ R+MK GV
Sbjct: 742 EVRRNMKEQGV 752
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 174/427 (40%), Gaps = 62/427 (14%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE-SIGGALIEFYCGCEAFDGAMR 274
P+ Y F ++++A A L GK +H + K G+ D ++ L+ Y C F +
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFN-------------------------- 308
V+DR+ + NSLI+ L S + E A F
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 309 ---------------RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
R E NS N+++ Y G++ SK L R +
Sbjct: 215 PEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL------- 267
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
VTWN+++S QN +AL+ M ++ T S + ACS L
Sbjct: 268 ----------VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 414 LQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
L+ G+ LHA+ +K + N +VG++LVDMY C + + F + + W A++
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 473 GYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
GYS + EA+LLF M E ++ N+ T GV+ ACVR+G + I + G+
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
++D+ R G + A M + D V W +++ F + E K
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 592 MFGLDKK 598
M L++K
Sbjct: 497 MQNLERK 503
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 127/553 (22%), Positives = 217/553 (39%), Gaps = 110/553 (19%)
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEA 138
+K + F +L A L + GKQIH V K GY V + L+ Y C +
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+VFD + E N+ V W LIS S +
Sbjct: 153 YKVFDRISERNQ-------------------------------VSWNSLISSLC-SFEKW 180
Query: 199 EKALKLFRWMRESGENM-PNEYTFDSVIRACARLG---AFCEGKVVHGLLIKCGFEFDES 254
E AL+ FR M + EN+ P+ +T SV+ AC+ L GK VH ++ G E +
Sbjct: 181 EMALEAFRCMLD--ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSF 237
Query: 255 IGGALIEFY-------------------------------CGCEAFDGAMR-----VYDR 278
I L+ Y C E A+ V +
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 279 LENPCLNASNSLIN----GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
+E S+ L ++ G+ A + N + NS ++++ Y QV
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA- 393
+R+F+ M R I WN+MI+GY QN ++AL L++ M + A
Sbjct: 358 RRVFDGMFDRKI-----------------GLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+ +T + + AC G+ + + +H +VK + + +V +L+DMYSR G I+ A
Sbjct: 401 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM--LEQDIV---------PNAATF 502
F + ++ W ++ GY +A+LL M LE+ + PN+ T
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+ +L +C + +G +I + + + +VD+ + G L + + +P
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP- 579
Query: 563 ELDAVVWGALLSA 575
+ + + W ++ A
Sbjct: 580 QKNVITWNVIIMA 592
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 6/226 (2%)
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
S+ R+P W ++ V++NL +A+ Y+ M L I F L A + L
Sbjct: 53 SIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQD 112
Query: 414 LQQGQLLHAHLVKTPFE-SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
++ G+ +HAH+ K + +V V +LV++Y +CG F IS N +W +L++
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
A+ F ML++++ P++ T V V++AC + EG+ + + + +YG+
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRK 231
Query: 533 -TLEHY--TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
L + +V + G+ G L ++ + D V W +LS+
Sbjct: 232 GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSS 276
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 211/694 (30%), Positives = 341/694 (49%), Gaps = 103/694 (14%)
Query: 22 NKAITECGRNGQLVTARNLFDQM-------------------------------PI--RT 48
N+ I ++ +L AR LFD++ P+ R
Sbjct: 53 NRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRD 112
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGK---- 104
V +N M+ G+S +++L M K ++ T++++L A L ++D +
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVL---AGLALVVDDEKQCV 169
Query: 105 QIHCLVLKSGYECFEFVGSGLLFFYANCFE----IEEAKRVFDELHEDNELLWSLMLVGY 160
Q H LKSG V + L+ Y+ C + A++VFD++ E +E W+ M+ GY
Sbjct: 170 QFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGY 229
Query: 161 VQCNLMSDAFDVFIKMPKK-DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
V+ ++ M + +V + +ISGY + ++AL++ R M SG + +E+
Sbjct: 230 VKNGCFDLGKELLKGMDENMKLVAYNAMISGYV-NCGLYQEALEMVRRMVSSGIEL-DEF 287
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIK---CGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
T+ SVIRACA GK VH +++ F FD S L+ Y C F+ A ++
Sbjct: 288 TYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDNS----LVTLYYKCGKFNEARAIF 343
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
+++ L + N+L++G +S G I +A+LIF + E N +S+ MI G A G ++ +
Sbjct: 344 EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
LF M++ +
Sbjct: 404 LFS------------------------------------------------CMKREGFEP 415
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
FS +C+ LG+ GQ HA LVK F+S++ G +L+ MY++CG + +AQ F
Sbjct: 416 CDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVF 475
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
++ + +W AL+ HG G EAV ++E ML++ I P+ TF+ VL+AC AGLV+
Sbjct: 476 RTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVD 535
Query: 517 EGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+G K F SM++ Y + P +HY ++DLL RSG EAE I+ +P + A +W ALLS
Sbjct: 536 QGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSG 595
Query: 576 CWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
C NME+G AA K+FGL + Y++LSN+YA G+W + +RK + VKK+
Sbjct: 596 CRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEV 655
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
CSWIE+ ++VH F V+D ++P +Y L+ L
Sbjct: 656 ACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDL 689
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 188/466 (40%), Gaps = 133/466 (28%)
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
+ VHG +I GF+ I LI+ YC D A +++D + P A ++++G +
Sbjct: 33 ARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 297 MGRIEDAELIFNR--LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR---------- 344
G I A +F ++ +++ YN+MI G++ + LF KM H
Sbjct: 93 SGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYA 152
Query: 345 SIIS------------------------------LNTMISVIPEMERNPV---------- 364
S+++ N ++SV +P
Sbjct: 153 SVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFD 212
Query: 365 --------TWNSMISGYVQN--------------------------------NLHEKALQ 384
+W +M++GYV+N L+++AL+
Sbjct: 213 DIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALE 272
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
+ M I+ T+ + AC+ LQ G+ +HA++++ + + + SLV +Y
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFDNSLVTLYY 331
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+CG N+A+A F + + ++ +W AL++GY G EA L+F+ M E++I+ +++
Sbjct: 332 KCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL----SWMI 387
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVP-------------------------------- 532
++S G EG+K+F MK G P
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIG 447
Query: 533 ---TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+L ++ + + G + EA++ + MP LD+V W AL++A
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEAQQVFRTMPC-LDSVSWNALIAA 492
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 123/291 (42%), Gaps = 62/291 (21%)
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
SLQ + +H +++ F+ + ++ L+D+Y + ++ A+ F IS P+ A T +++
Sbjct: 29 SLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVS 88
Query: 473 GY---------------------------------SHHGLGSEAVLLFEIMLEQDIVPNA 499
GY SH+ G A+ LF M + P+
Sbjct: 89 GYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDD 148
Query: 500 ATFVGVLSACVRAGLVNEGMKIFR----SMKS-YGVVPTLEHYTCVVDLLGRSGH----L 550
T+ VL+ A +V++ + + ++KS G V ++ + +V + R L
Sbjct: 149 FTYASVLAGL--ALVVDDEKQCVQFHAAALKSGAGYVTSVSN--ALVSVYSRCASSPSLL 204
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK-PISAYVILSNI 609
H A + D+P E D W +++ ++ + + + G+D+ + AY + +
Sbjct: 205 HSARKVFDDIP-EKDERSWTTMMTG---YVKNGCFDLGKELLKGMDENMKLVAYNAMISG 260
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDP--------GCS---WIELNSRVHAF 649
Y G + + +++ +R+ ++ D C+ ++L +VHA+
Sbjct: 261 YVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAY 311
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 196/664 (29%), Positives = 347/664 (52%), Gaps = 64/664 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G + A N+F +M R + SWN ++ GY+K FDE+L L + + ++ + TF +
Sbjct: 81 RFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPS 140
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L CA L+ G+++H V++ ++ V + L+ Y C ++ A+ +FD++ +
Sbjct: 141 VLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRD 200
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ GY + D C + L+LF MR
Sbjct: 201 RISWNAMISGYFE--------------------------------NDECLEGLELFFRMR 228
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E + P+ T SVI AC LG G +H +++ ++ + S+ +LI+ Y +
Sbjct: 229 ELSID-PDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHW 287
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGY 325
A V+ +E + + ++I+G + + A + + T + ++ S++
Sbjct: 288 KEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSAC 347
Query: 326 AVYGQVDDSKRLFEKMPHRS-----IISLNTMISVIPEMER--------------NPVTW 366
A GQ+D +L E + R+ ++ N++I + + +R + ++W
Sbjct: 348 ASLGQLDMGMKLHE-LAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISW 406
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL--FHACSCLGSLQQGQLLHAHL 424
S+I+G NN +AL + RK+ + ++ +++ AC+ +G+L G+ +HAH
Sbjct: 407 TSVINGLRINNRCFEALIFF---RKMILKSKPNSVTLISALSACARVGALMCGKEIHAHA 463
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
+K + ++ +++D+Y RCG + A F +++ +V AW L+ GY+ G G+ +
Sbjct: 464 LKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-NLNEKDVGAWNILLTGYAQKGKGAMVM 522
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDL 543
LF+ M+E +I P+ TF+ +L AC R+G+V EG++ F+ MK +Y + P L+HY CVVDL
Sbjct: 523 ELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDL 582
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
LGR+G L+EA EFI+ MPI+ D +WGALL+AC ++ +GE AAQ +F D + I Y
Sbjct: 583 LGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYY 642
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
++L N+YA GKW + +R+ + + DPGCSW+E+ +VHAF D +P I
Sbjct: 643 ILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEIN 702
Query: 664 ATLE 667
LE
Sbjct: 703 VVLE 706
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 149/599 (24%), Positives = 249/599 (41%), Gaps = 101/599 (16%)
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
+++L +++M + + E F ++ +C K GY E+V
Sbjct: 12 GNLEQALKHLASMQEVKIPVEEDCFVALIRLCEN---------------KRGYSEGEYVW 56
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+L + L + +L +V+ + +A++VF +M ++D+
Sbjct: 57 KAVLSSLVTLLSVR---------------LGNALLSMFVRFGDVGNAWNVFGRMGERDLF 101
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W L+ GY K+ ++AL L+ + +G P+ YTF SV+R+CA G+ VH
Sbjct: 102 SWNVLVGGYTKA-GFFDEALCLYHRILWAGIR-PDVYTFPSVLRSCAGAMDLVRGREVHA 159
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR-IE 301
+++ F+ D + ALI Y C A ++D++ + N++I+G +E
Sbjct: 160 HVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLE 219
Query: 302 DAELIF---------NRLTEANSIS---------YNSMIKGYAVYGQVDDSKRLFEKM-- 341
EL F + +T + IS + + Y V D + ++ +
Sbjct: 220 GLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQ 279
Query: 342 PHRSIISLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+ S+ SV ME R+ V+W ++ISG V N L +KAL+ Y TM T
Sbjct: 280 MYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVT 339
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ + AC+ LG L G LH +T V V SL+DMYS+C I A F I
Sbjct: 340 IASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIP 399
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+V +WT+++NG + EA++ F M+ + PN+ T + LSAC R G + G +
Sbjct: 400 DKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGKE 458
Query: 521 IF-----RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
I M G +P ++DL R G +
Sbjct: 459 IHAHALKAGMGFDGFLP-----NAILDLYVRCGRM------------------------- 488
Query: 576 CWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
R A F L++K + A+ IL YA GK M++ KR+ E+ D
Sbjct: 489 -----------RTALNQFNLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPD 536
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 138/536 (25%), Positives = 239/536 (44%), Gaps = 62/536 (11%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N IT + G +V+AR LFD+MP R +SWN M+ GY + + E L L M ++
Sbjct: 173 VNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSI 232
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ T ++++S C L G Q+H V+++ Y+ G + Y
Sbjct: 233 DPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYD-------GNISVY----------- 274
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
N L+ + VG+ + +A VF M +DVV WT +ISG ++ +K
Sbjct: 275 --------NSLIQMYLSVGHWK-----EAESVFSGMECRDVVSWTTIISGCVDNLLP-DK 320
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL+ ++ M +G MP+E T SV+ ACA LG G +H L + G + +LI
Sbjct: 321 ALETYKTMEITG-TMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLI 379
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---TEANSIS 317
+ Y C+ + A+ ++ ++ + + + S+INGL R +A + F ++ ++ NS++
Sbjct: 380 DMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSKPNSVT 439
Query: 318 YNSMIKGYAVYGQVDDSKRL----------FEKMPHRSIISL-------NTMISVIPEME 360
S + A G + K + F+ +I+ L T ++ E
Sbjct: 440 LISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLNE 499
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QL 419
++ WN +++GY Q ++L+ M + I+ TF L ACS G + +G +
Sbjct: 500 KDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEY 559
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
V N+ +VD+ R G +N+A + P+ A W AL+N H
Sbjct: 560 FQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIH- 618
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSAC---VRAGLVNEGMKIFRSMKSYGVV 531
VLL E+ + +A + + C +G +E K+ R+MK G++
Sbjct: 619 ---RHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLI 671
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 12/264 (4%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
MKL+ +T +V N I + ++ A +F Q+P + V+SW +++ G
Sbjct: 357 MKLHELAERT--GHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLR 414
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ E+L M + K N T + LS CA++ +L+ GK+IH LK+G F
Sbjct: 415 INNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGF 473
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
+ + +L Y C + A F+ L+E + W+++L GY Q + ++F +M + +
Sbjct: 474 LPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESE 532
Query: 181 V----VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
+ V + L+ ++S + L+ F+ M+ + PN + V+ R G E
Sbjct: 533 INPDDVTFISLLCACSRS-GMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNE 591
Query: 237 GKVVHGLLIKCGFEFDESIGGALI 260
H + + + D +I GAL+
Sbjct: 592 A---HEFIERMPIKPDPAIWGALL 612
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 198/656 (30%), Positives = 324/656 (49%), Gaps = 56/656 (8%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
NG + AR +FD++P R + WN ML GY K F+ ++ M S +N T++ I
Sbjct: 193 NGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCI 252
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
LS+CA G Q+H LV+ SG+E V + L+ Y+ C + +A+++F+
Sbjct: 253 LSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFN------- 305
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
MP+ D V W LI+GY ++ ++A LF M
Sbjct: 306 ------------------------TMPQTDTVTWNGLIAGYVQN-GFTDEAAPLFNAMIS 340
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+G P+ TF S + + G+ K VH +++ FD + ALI+ Y +
Sbjct: 341 AGVK-PDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVE 399
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA 326
A +++ + + ++I+G + G DA F L + NS++ S++ A
Sbjct: 400 MARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACA 459
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNS 368
+ K L + + + ++ + S I +M E + + WNS
Sbjct: 460 ALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNS 519
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
MIS + QN E A+ L+ M + S + + L +L G+ +H ++++
Sbjct: 520 MISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNA 579
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
F S+ +V ++L+DMYS+CG + A+ F+ ++ N +W +++ Y +HG E + LF
Sbjct: 580 FSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFH 639
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
ML + P+ TF+ ++SAC AGLV EG+ F M + YG+ +EHY C+VDL GR+
Sbjct: 640 EMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRA 699
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G LHEA + IK MP DA VWG LL AC N+E+ + A++ + LD K YV+LS
Sbjct: 700 GRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLS 759
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
N++A G+WG + +R+ + V+K PG SWI++N H FS + N+P IY
Sbjct: 760 NVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAAEGNHPESVEIY 815
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 133/544 (24%), Positives = 234/544 (43%), Gaps = 113/544 (20%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ NLF + + + WN M+ G FD +L M SNV ++ TF ++
Sbjct: 93 GRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVI 152
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C LN++ +H G+ FVGS L+ YA+ I +A+RVFDEL + + +
Sbjct: 153 KACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTI 212
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
LW++ML GYV+ ++A F M +
Sbjct: 213 LWNVMLHGYVKSGDFNNAMGTFCGM---------------------------------RT 239
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+M N T+ ++ CA G FC G VHGL+I GFEFD + L+ Y C
Sbjct: 240 SYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKC----- 294
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
G + DA +FN + + +++++N +I GY G
Sbjct: 295 --------------------------GNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFT 328
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
D++ LF N MIS ++ + VT+ S + +++
Sbjct: 329 DEAAPLF-----------NAMISA--GVKPDSVTFASFLPSILES--------------- 360
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
GSL+ + +H+++V+ +VY+ ++L+D+Y + G +
Sbjct: 361 --------------------GSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEM 400
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A+ F + +VA TA+++GY HGL +A+ F ++++ +VPN+ T VL AC
Sbjct: 401 ARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAA 460
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
+ G ++ + + + + + D+ + G L A EF + M E D++ W +
Sbjct: 461 LAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-ETDSICWNS 519
Query: 572 LLSA 575
++S+
Sbjct: 520 MISS 523
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 229/538 (42%), Gaps = 66/538 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N + + G L AR LF+ MP V+WN ++ GY + DE+ L + M + V
Sbjct: 284 ANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGV 343
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
K + TF++ L + SL K++H +++ ++ S L+ Y ++E A++
Sbjct: 344 KPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARK 403
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY---AKSVDG 197
+F + N L+ DV V T +ISGY ++D
Sbjct: 404 IF----QQNTLV---------------------------DVAVCTAMISGYVLHGLNID- 431
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
A+ FRW+ + G +PN T SV+ ACA L A GK +H ++K E ++G
Sbjct: 432 ---AINTFRWLIQEGM-VPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGS 487
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
A+ + Y C D A + R+ NS+I+ G+ E A +F ++ + +
Sbjct: 488 AITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGA-K 546
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPH----RSIISLNTMI-SVIPEM------------- 359
++S+ A+ + + K H R+ S +T + S + +M
Sbjct: 547 FDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCV 606
Query: 360 -----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+N V+WNS+I+ Y + + L L+ M + + TF V+ AC G +
Sbjct: 607 FNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLV 666
Query: 415 QQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMN 472
+G H + + + +VD+Y R G +++A + S+ +P+ W L+
Sbjct: 667 GEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLG 726
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
HG A L +LE D N+ +V + + AG +K+ R MK GV
Sbjct: 727 ACRLHGNVELAKLASRHLLELD-PKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGV 783
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 211/701 (30%), Positives = 341/701 (48%), Gaps = 68/701 (9%)
Query: 6 TQSQTLMTQETLIV--------STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLC 57
T SQ L Q LI+ S K + G + R LF+++ + +N ++
Sbjct: 26 TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIR 85
Query: 58 GYSKWAKFDESLSLVSTMHR-SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYE 116
G+S S+ L + + + +N++ + T++ +S ++L G +H + G
Sbjct: 86 GFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA 145
Query: 117 CFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM 176
FVGS ++ Y E A++VFD M
Sbjct: 146 SNLFVGSAIVDLYFKFTRAELARKVFD-------------------------------VM 174
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
P++D V+W +ISG++++ E ++++F M + G + + T +V+ A A L +
Sbjct: 175 PERDTVLWNTMISGFSRN-SYFEDSIRVFVDMLDVGLSF-DSTTLATVLTAVAELQEYRL 232
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
G + L K G D + LI Y C ++D+++ P L + N++I+G
Sbjct: 233 GMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTF 292
Query: 297 MGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
E A +F L NS + +I Y + + S RL + + + I L
Sbjct: 293 NHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLS-RLIQNLSLKIGIILQPS 351
Query: 353 ISVI-------------------PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
+S E++ +WN+MISGY QN L ++A+ L+ M
Sbjct: 352 VSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-Q 410
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+ T + + AC+ LG+L G+ +H + ESNVYV T+LVDMY++CGSI +A+
Sbjct: 411 LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEAR 470
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F + NV W A++ GY HG G EA+ LF ML+ I P TF+ +L AC +G
Sbjct: 471 QLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSG 530
Query: 514 LVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
LV+EG +IF SM +YG P EHY C+VD+LGR+G L A EFI+ MP+E VWGAL
Sbjct: 531 LVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGAL 590
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
L AC N E+ A++++F LD + + YV+LSNIY+ + K +R+ + ++
Sbjct: 591 LGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLA 650
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
K PGC+ IE++ + + F+ DR++P I+ LE LT +
Sbjct: 651 KTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKM 691
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 9/183 (4%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
R + F L + + L L Q Q A L+ ++ T L + G++ +
Sbjct: 12 RGQRFFLTLLNNATTLSQLLQIQ---AQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQL 68
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGL 514
F+ +S P++ + L+ G+S +GL ++ L+ + ++ P+ T+ +SA R L
Sbjct: 69 FNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASR--L 126
Query: 515 VNEGMKIFRSMKSY--GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+E + + S GV L + +VDL + A + MP E D V+W +
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTM 185
Query: 573 LSA 575
+S
Sbjct: 186 ISG 188
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 196/708 (27%), Positives = 341/708 (48%), Gaps = 97/708 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMP--IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N I+ G+ LV AR++F+ M R VVSWN M+ Y++ E+L L M+
Sbjct: 46 NALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQG 105
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ + TF ++L C +SL G++IH V SG + F+ + + L+ YA + +AK
Sbjct: 106 LGTDHVTFVSVLGAC---SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAK 162
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
R+F L +E W+ +++ + Q S A +F +M C+
Sbjct: 163 RMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK--------------------CD 202
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
PN T+ +VI + EG+ +H ++ GF+ D + AL
Sbjct: 203 MK--------------PNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATAL 248
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-------TE 312
I Y C + A V+D+++ + + N +I + G +A ++ +L T+
Sbjct: 249 INMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTK 308
Query: 313 ANSISY--------------------------------NSMIKGYAVYGQVDDSKRLFEK 340
A +S +++ YA G +++++++F
Sbjct: 309 ATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNA 368
Query: 341 MPHRSIISLNTMISVIPEM-----------------ERNPVTWNSMISGYVQNNLHEKAL 383
M +R ++ +T+I R+ + WN+MI+ YVQN A+
Sbjct: 369 MKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAM 428
Query: 384 QLYMTMRKLA-IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
+++ M A + TF + AC+ LG L + + LHA + ++ ESNV V +L++M
Sbjct: 429 KIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINM 488
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
Y+RCGS+ +A+ F++ V +WTA++ +S +G +EA+ LF+ M + + P+ T+
Sbjct: 489 YARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTY 548
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+L C G + +G + F M +G+ PT +H+ +VDLLGRSG L +A+E ++ MP
Sbjct: 549 TSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMP 608
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
E D V W L+AC +E+GE AA++++ LD + Y+ +SNIYA G W K
Sbjct: 609 FEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVAS 668
Query: 622 IRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+RK++ +KK PG S+IE++ ++H FS + +P + I L L
Sbjct: 669 VRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRL 716
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 137/575 (23%), Positives = 275/575 (47%), Gaps = 59/575 (10%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
+ TF T+L C+ + +G+ +H + S +E VG+ L+ Y C + +A+ VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 143 DEL--HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAKSVD 196
+ + + N + W+ M+ Y Q ++A ++ +M + D V + ++ +
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ 125
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
G E ++F +S +++ N +++ AR G+ + K + L DE+
Sbjct: 126 GREIHNRVFYSGLDSFQSLAN-----ALVTMYARFGSVGDAKRMFQSLQT----RDETSW 176
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN--------GLISMGRIEDAELIFN 308
A+I + + GA+R++ ++ S + IN ++ GR AE++ N
Sbjct: 177 NAVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN 236
Query: 309 RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
+++ + ++I Y G +++ +F+KM R ++S WN
Sbjct: 237 GF-DSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVS-----------------WNV 278
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
MI YVQN +AL+LY + RT++TF + ACS + +L QG+L+H+H+++
Sbjct: 279 MIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERG 338
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE---AVL 485
+S V V T+LV+MY++CGS+ +A+ F+++ + + AW+ L+ Y+ +G G + A
Sbjct: 339 LDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARK 398
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLL 544
+F+ + +D + + +++ V+ G MKIFR M + G+ P + V++
Sbjct: 399 VFDRLGSRDTI----CWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEAC 454
Query: 545 GRSGHLHEAEEF---IKDMPIELDAVVWGALLSACWFWMNMEVGER--AAQKMFGLDKKP 599
G L E + I + +E + VV L++ ++E ER AA K +K
Sbjct: 455 ASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAK-----EKT 509
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
+ ++ + ++ G++ + +D+ + + VK D
Sbjct: 510 VVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPD 544
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 179/401 (44%), Gaps = 57/401 (14%)
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+ P+ TF +V+ +C+ G EG+ +H + FE D +G ALI Y C++ A
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 273 MRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRLTEA----------------- 313
V++ ++ N N++I G +A +++ R+
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
Query: 314 ---------NSISY----------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
N + Y N+++ YA +G V D+KR+F+ SL T
Sbjct: 122 SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQ--------SLQT--- 170
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
R+ +WN++I + Q+ AL+++ M K + +T+ + S L
Sbjct: 171 ------RDETSWNAVILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVL 223
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+G+ +HA +V F+S++ V T+L++MY +CGS ++A+ F + ++ +W ++ Y
Sbjct: 224 PEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCY 283
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
+G EA+ L++ + + ATFV +L AC + +G + + G+ +
Sbjct: 284 VQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEV 343
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
T +V++ + G L EA + M DAV W L+ A
Sbjct: 344 AVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGA 383
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ +V TN I R G L A LF +TVVSW M+ +S++ ++ E+L L
Sbjct: 476 ESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQE 535
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDG 103
M VK ++ T+++IL VC SL G
Sbjct: 536 MDLEGVKPDDVTYTSILFVCTHGGSLEQG 564
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 184/611 (30%), Positives = 309/611 (50%), Gaps = 52/611 (8%)
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+L E F ++L C + QI ++ +G++ E++ L+ A + A++
Sbjct: 35 RLLEERFISLLQSCKTSKQV---HQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQ 91
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+FD++ P ++ +W + GYA+S + +
Sbjct: 92 LFDQI-------------------------------PDPNIALWNSMFRGYAQS-ESYRE 119
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
+ LF M+ + PN +TF V+++C ++ A EG+ VH LIKCGF + +G LI
Sbjct: 120 VVFLFFQMK-GMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLI 178
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNS 320
+ Y A +++ + + A S+ING I + A +F+ E + + +N
Sbjct: 179 DMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNI 238
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ERNPVTW 366
M+ GY G + ++++LF +MP+R ++ NT++ + EM ERN +W
Sbjct: 239 MVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSW 298
Query: 367 NSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
N++I GY N L + L + M + + +T + AC+ LG+L G+ +H +
Sbjct: 299 NALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAE 358
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ + NVYVG +L+DMY++CG I +A + F + + ++ +W L+ G + H G++A+
Sbjct: 359 SSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALN 418
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
LF M P+ TF+G+L AC GLV +G F+SM Y ++P +EHY C+VD+L
Sbjct: 419 LFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDML 478
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
R+G L +A F++ MP+E D V+W LL AC + N+E+ E A Q++ L+ K + YV
Sbjct: 479 ARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYV 538
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+LSNIY G+W ++ + KK PGCS IE+N V F D +P IY
Sbjct: 539 MLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYG 598
Query: 665 TLEHLTANLNS 675
L L L S
Sbjct: 599 VLRGLVKVLRS 609
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 222/497 (44%), Gaps = 83/497 (16%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
T K +T C ++ AR LFDQ+P + WN+M GY++ + E + L M ++
Sbjct: 73 TPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDI 132
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA---------- 130
+ N TF +L C ++N+LI+G+Q+HC ++K G+ FVG+ L+ Y+
Sbjct: 133 RPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYK 192
Query: 131 ---NCFE------------------IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
FE + A+R+FD E + +LW++M+ GY++ M +A
Sbjct: 193 IFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEA 252
Query: 170 FDVFIKMPKKDVVVWTKLISGYAK--SVDGCE---------------------------- 199
+F +MP +DV+ W ++ GYA +V+ E
Sbjct: 253 RKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFF 312
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+ L F+ M + PN+ T +V+ ACARLGA GK VH G + + +G AL
Sbjct: 313 EVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNAL 372
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NS 315
++ Y C + A+ V+ ++ L + N+LI GL R DA +F ++ A +
Sbjct: 373 MDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDG 432
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
I++ ++ G V+D F+ M +I +P++E + M+ +
Sbjct: 433 ITFIGILCACTHMGLVEDGFAYFQSMADDYLI--------MPQIEH----YGCMVDMLAR 480
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVY 434
E+A+ +RK+ ++ ++ L AC +++ +L L++ P Y
Sbjct: 481 AGRLEQAMAF---VRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANY 537
Query: 435 VGTSLVDMYSRCGSIND 451
V L ++Y G D
Sbjct: 538 V--MLSNIYGDAGRWED 552
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 156/371 (42%), Gaps = 76/371 (20%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL-SLVSTMHRSNV 80
N + NG + LF++MP R + SWN ++ GY+ F E L S + S+V
Sbjct: 268 NTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDV 327
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
N+ T T+LS CA+L +L GK +H SG + +VG+ L+ YA C IE A
Sbjct: 328 PPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAIS 387
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF + + + W+ ++ G ++ +++ D
Sbjct: 388 VFRGMDTKDLISWNTLIGG----------------------------LAMHSRGAD---- 415
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG---- 256
AL LF M+ +G+ P+ TF ++ AC +G L++ GF + +S+
Sbjct: 416 ALNLFFQMKNAGQK-PDGITFIGILCACTHMG-----------LVEDGFAYFQSMADDYL 463
Query: 257 --------GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI----EDAE 304
G +++ + AM ++ + A + GL+ RI E AE
Sbjct: 464 IMPQIEHYGCMVDMLARAGRLEQAMAFVRKMP---VEADGVIWAGLLGACRIYKNVELAE 520
Query: 305 LIFNRLTE---ANSISYNSMIKGYAVYGQVDDSKRL--------FEKMPHRSIISLNTMI 353
L RL E N +Y + Y G+ +D RL F+K+P S+I +N +
Sbjct: 521 LALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAV 580
Query: 354 SVIPEM-ERNP 363
+ ER+P
Sbjct: 581 VEFYSLDERHP 591
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 194/609 (31%), Positives = 306/609 (50%), Gaps = 83/609 (13%)
Query: 69 LSLVSTMHRS-NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLF 127
L L + RS + + TF +L CA+L G VL+ G + FV +
Sbjct: 109 LPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATH 168
Query: 128 FYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKL 187
F + +E+A+R+FD + P +D+V W L
Sbjct: 169 FLSIRGPMEDARRLFD-------------------------------RSPVRDLVSWNTL 197
Query: 188 ISGYAKSVDGCEKALKLF-RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
I GY + + E AL+LF R + E P+E T + + C ++ G+ +HG +
Sbjct: 198 IGGYVRRGNPAE-ALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDS 256
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
G + AL++ Y C G +E A+ +
Sbjct: 257 DGVSCTVRLMNALMDMYIKC-------------------------------GSLEMAKSV 285
Query: 307 FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
F R+ +S+ +MI G+A +G +DD++++F++MP ER+ W
Sbjct: 286 FERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMP-----------------ERDVFPW 328
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N++++GYVQ ++AL L+ M++ ++ T L ACS LG+L+ G +H ++ K
Sbjct: 329 NALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEK 388
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+V +GTSL+DMY++CG+I A F I N WTA++ G ++HG +EA+
Sbjct: 389 HRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEH 448
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLG 545
F M+E P+ TF+GVLSAC AGLV EG + F M++ Y + ++HY+C++DLLG
Sbjct: 449 FRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLG 508
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+GHL EAE+ + MP+E DAVVWGA+ AC N+ +GE+AA K+ +D YV+
Sbjct: 509 RAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVL 568
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
L+N+YA K +R + HL V+K PGCS IELN VH F V+D+++ + + IY
Sbjct: 569 LANMYAEANMRKKADKVRAMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHMDSHAIYDC 628
Query: 666 LEHLTANLN 674
L +T +
Sbjct: 629 LHEITLQIK 637
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 203/421 (48%), Gaps = 26/421 (6%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN--VKLNETTFS 88
G + AR LFD+ P+R +VSWNT++ GY + E+L L M + V+ +E T
Sbjct: 173 RGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMI 232
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+S C Q+ L G+++H V G C + + L+ Y C +E AK VF+ +
Sbjct: 233 AAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHR 292
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ W+ M+VG+ + LM DA VF +MP++DV W L++GY + C++AL LF M
Sbjct: 293 TVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQ-CKQCKEALSLFHEM 351
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+E+ +P+E T +++ AC++LGA G VH + K F ++G +LI+ Y C
Sbjct: 352 QEA-SVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGN 410
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKG 324
+ A+ ++ + ++I GL + G +A F + E + I++ ++
Sbjct: 411 IEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSA 470
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
G V + + F M + +ER ++ MI + ++A Q
Sbjct: 471 CCHAGLVKEGREFFSLMETKY------------HLERKMKHYSCMIDLLGRAGHLDEAEQ 518
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMY 443
L TM ++ + +F AC G++ G+ LV+ P +S +YV L +MY
Sbjct: 519 LVNTM---PMEPDAVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYV--LLANMY 573
Query: 444 S 444
+
Sbjct: 574 A 574
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 33/221 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS I + G + AR +FD+MP R V WN ++ GY + + E+LSL M
Sbjct: 294 VVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQE 353
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++V +E T +L+ C+QL +L G +H + K +G+ L+ YA C IE+
Sbjct: 354 ASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEK 413
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F E+ E N L W+ M+ G G+A
Sbjct: 414 AIHIFKEIPEKNALTWTAMICGLAN--------------------------HGHAN---- 443
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+A++ FR M E G+ P+E TF V+ AC G EG+
Sbjct: 444 --EAIEHFRTMIELGQK-PDEITFIGVLSACCHAGLVKEGR 481
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
Query: 380 EKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+ L LY + + R TF L AC+ L G AH+++ +S+V+V +
Sbjct: 106 RRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNA 165
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV-- 496
S G + DA+ F ++ +W L+ GY G +EA+ LF M+ +D V
Sbjct: 166 ATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVR 225
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
P+ T + +S C + + G ++ + S GV T+ ++D+ + G L A+
Sbjct: 226 PDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAK 283
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 211/701 (30%), Positives = 341/701 (48%), Gaps = 68/701 (9%)
Query: 6 TQSQTLMTQETLIV--------STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLC 57
T SQ L Q LI+ S K + G + R LF+++ + +N ++
Sbjct: 26 TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIR 85
Query: 58 GYSKWAKFDESLSLVSTMHR-SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYE 116
G+S S+ L + + + +N++ + T++ +S ++L G +H + G
Sbjct: 86 GFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA 145
Query: 117 CFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM 176
FVGS ++ Y E A++VFD M
Sbjct: 146 SNLFVGSAIVDLYFKFTRAELARKVFD-------------------------------VM 174
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
P++D V+W +ISG++++ E ++++F M + G + + T +V+ A A L +
Sbjct: 175 PERDTVLWNTMISGFSRN-SYFEDSIRVFVDMLDVGLSF-DSTTLATVLTAVAELQEYRL 232
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
G + L K G D + LI Y C ++D+++ P L + N++I+G
Sbjct: 233 GMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTF 292
Query: 297 MGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
E A +F L NS + +I Y + + S RL + + + I L
Sbjct: 293 NHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLS-RLIQNLSLKIGIILQPS 351
Query: 353 ISVI-------------------PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
+S E++ +WN+MISGY QN L ++A+ L+ M
Sbjct: 352 VSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-Q 410
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+ T + + AC+ LG+L G+ +H + ESNVYV T+LVDMY++CGSI +A+
Sbjct: 411 LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEAR 470
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F + NV W A++ GY HG G EA+ LF ML+ I P TF+ +L AC +G
Sbjct: 471 QLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSG 530
Query: 514 LVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
LV+EG +IF SM +YG P EHY C+VD+LGR+G L A EFI+ MP+E VWGAL
Sbjct: 531 LVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGAL 590
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
L AC N E+ A++++F LD + + YV+LSNIY+ + K +R+ + ++
Sbjct: 591 LGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLA 650
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
K PGC+ IE++ + + F+ DR++P I+ LE LT +
Sbjct: 651 KTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKM 691
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 9/183 (4%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
R + F L + + L L Q Q A L+ ++ T L + G++ +
Sbjct: 12 RGQRFFLTLLNNATTLSQLLQIQ---AQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQL 68
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGL 514
F+ +S P++ + L+ G+S +GL ++ L+ + ++ ++ P+ T+ +SA R L
Sbjct: 69 FNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASR--L 126
Query: 515 VNEGMKIFRSMKSY--GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+E + + S GV L + +VDL + A + MP E D V+W +
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTM 185
Query: 573 LSA 575
+S
Sbjct: 186 ISG 188
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 202/677 (29%), Positives = 330/677 (48%), Gaps = 58/677 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N + G+ G L AR FD M +R VVSW M+ GYS+ + ++++ + M +
Sbjct: 192 LVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQ 251
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S + TF +I+ C + G+Q+H V+KSGY+ + L+ Y +I
Sbjct: 252 SGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVH 311
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A DVF + KD++ W +I+G+ + G
Sbjct: 312 AS-------------------------------DVFTMISTKDLISWASMITGFTQL--G 338
Query: 198 CE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E +AL LFR M G PNE+ F SV AC L G+ +HG+ K G + G
Sbjct: 339 YEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAG 398
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN-- 314
+L + Y A+R + ++E+P L + N++I G + +A F ++
Sbjct: 399 CSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLM 458
Query: 315 -----------------SISYNSMIKGYAVYGQVDDSKRLFEKM--PHRSIISLNTMISV 355
+I+ + I Y + +D + + + +L+ +V
Sbjct: 459 PDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNV 518
Query: 356 IPEMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
++ N V+WN+++S +Q+ + +L+ M T + + C+ L S
Sbjct: 519 FKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELAS 578
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L+ G +H VK+ +V V L+DMY++CGS+ A+ F S +P++ +W++L+ G
Sbjct: 579 LEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVG 638
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVP 532
Y+ GLG EA+ LF +M + PN T++GVLSAC GLV EG + +M+ G+ P
Sbjct: 639 YAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPP 698
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
T EH +C+VDLL R+G L+EAE FIK M D +W LL++C N+++ ERAA+ +
Sbjct: 699 TREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENI 758
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
LD +A V+LSNI+A +G W + +R + + V+K PG SWI + ++H F E
Sbjct: 759 LKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSE 818
Query: 653 DRNNPNCNVIYATLEHL 669
D ++ IY LE L
Sbjct: 819 DNSHQQRGDIYTMLEDL 835
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 205/499 (41%), Gaps = 111/499 (22%)
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S+++L +T+ ++ C + SL GK+IH +LKS + + + +L Y C +++
Sbjct: 151 SSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKD 210
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++ FD + N + W++M+ GY Q +DA ++I+M L SGY
Sbjct: 211 ARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQM----------LQSGY------ 254
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
P+ TF S+I+AC G G+ +HG +IK G++
Sbjct: 255 -----------------FPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHH----- 292
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
L A N+LI+ G+I A +F ++ + IS
Sbjct: 293 --------------------------LIAQNALISMYTRFGQIVHASDVFTMISTKDLIS 326
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+ SMI G+ G ++ LF M + N I
Sbjct: 327 WASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFI------------------------ 362
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
F +F AC L + G+ +H K NV+ G
Sbjct: 363 -----------------------FGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGC 399
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SL DMY++ G + A +F I SP++ +W A++ +S G +EA+ F M+ ++P
Sbjct: 400 SLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMP 459
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
+ TF+ +L AC +N+G +I + G+ ++ + + +LH+A
Sbjct: 460 DGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVF 519
Query: 558 KDMPIELDAVVWGALLSAC 576
KD+ + V W A+LSAC
Sbjct: 520 KDVSENANLVSWNAILSAC 538
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 112/210 (53%), Gaps = 2/210 (0%)
Query: 367 NSMISGYVQNNLHEKALQLY-MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
NS I+ + + +AL + + +I ST+ L AC+ + SL+ G+ +H H++
Sbjct: 125 NSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHIL 184
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K+ + ++ + +++MY +CGS+ DA+ +F ++ NV +WT +++GYS +G ++A++
Sbjct: 185 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAII 244
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
++ ML+ P+ TF ++ AC AG ++ G ++ + G L ++ +
Sbjct: 245 MYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYT 304
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
R G + A + + + D + W ++++
Sbjct: 305 RFGQIVHASDVFTMISTK-DLISWASMITG 333
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 223/701 (31%), Positives = 344/701 (49%), Gaps = 83/701 (11%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
V N +T R G + +ARN+FD M +R +VSW M ++ ESL L+ M
Sbjct: 85 VVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLE 144
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL--------KSGYECFEF-VGSGLLFF 128
S + N T + C +++CLV K G + VGS L+
Sbjct: 145 SGLLPNAYTLCAVAHACFP-------HELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDM 197
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
A ++ A++VFD L E K VVVWT LI
Sbjct: 198 LARNGDLASARKVFDGLIE-------------------------------KTVVVWTLLI 226
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
S Y + + E+A+++F E G P+ YT S+I AC LG+ G +H L ++ G
Sbjct: 227 SRYVQG-ECAEEAVEIFLDFLEDGFE-PDRYTMSSMISACTELGSVRLGLQLHSLALRMG 284
Query: 249 FEFDESIGGALIEFYCGC---EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
F D + L++ Y +A D A +V++R+ + + +LI+G + G E+ +
Sbjct: 285 FASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVM 344
Query: 306 IF-----NRLTEANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLN 350
+ N + N I+Y+S++K G V+ V S + +++S+
Sbjct: 345 VLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMY 404
Query: 351 TMISVIPEMER--NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
+ E R N + SMIS + + L + ++ + + STF+ L A
Sbjct: 405 AESGCMEEARRVFNQLYERSMISCITEG----RDAPLDHRIGRMDMGISSSTFASLISAA 460
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ +G L +GQ LHA +K F S+ +V SLV MYSRCG + DA SF+ + NV +WT
Sbjct: 461 ASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWT 520
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KS 527
++++G + HG A+ LF M+ + PN T++ VLSAC GLV EG + FRSM +
Sbjct: 521 SMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRD 580
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
+G++P +EHY C+VDLL RSG + EA EFI +MP++ DA+VW LL AC N+EVGE
Sbjct: 581 HGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEI 640
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVH 647
AA+ + L+ + + YV+LSN+YA G W + IR + + K+ G SW+E+ + H
Sbjct: 641 AAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTH 700
Query: 648 AFSVEDRNNPNCNVIYATLEHLTANLN--------SVVLFD 680
F D ++P IY L+ L + S+VL D
Sbjct: 701 EFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHD 741
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 204/463 (44%), Gaps = 46/463 (9%)
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK-KDVVVWTKLISGYAKSVDGCEK-A 201
+L + + ++ + +L Y +C ++ A +VF M +D+V WT + S A+ +G E+ +
Sbjct: 78 DLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLAR--NGAERES 135
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI-KCGF-EFDESIGGAL 259
L L M ESG +PN YT +V AC +C V L+ K G D ++G AL
Sbjct: 136 LLLIGEMLESGL-LPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSAL 194
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANS 315
I+ A +V+D L + LI+ + E+A IF E +
Sbjct: 195 IDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDR 254
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFE------------------KMPHRSII--SLNTMISV 355
+ +SMI G V +L M +S I +++ V
Sbjct: 255 YTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKV 314
Query: 356 IPEMERNPV-TWNSMISGYVQNNLHE-KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
M +N V +W ++ISGYVQ+ + E K + L+ M +I T+S + AC+ +
Sbjct: 315 FERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISD 374
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN-VAAWTALMN 472
G+ +HAH++K+ + VG +LV MY+ G + +A+ F+ + + ++ T +
Sbjct: 375 HDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRD 434
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
H +G D+ +++TF ++SA G++ +G ++ G
Sbjct: 435 APLDHRIG-----------RMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGS 483
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+V + R G+L +A ++ + + + W +++S
Sbjct: 484 DRFVSNSLVSMYSRCGYLEDACRSFNELK-DRNVISWTSMISG 525
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 31/310 (10%)
Query: 293 GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
G + +GR L+ L + +++ NS++ Y+ G V ++ +F+ M R +
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGM--RGL------ 113
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC---- 408
R+ V+W +M S +N ++L L M + + T + HAC
Sbjct: 114 --------RDIVSWTAMASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHE 165
Query: 409 -SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CL L+H + + +++ VG++L+DM +R G + A+ F + V W
Sbjct: 166 LYCLVGGVVLGLVHKMGL---WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVW 222
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
T L++ Y EAV +F LE P+ T ++SAC G V G+++
Sbjct: 223 TLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALR 282
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL---DAVVWGALLSACWFWMNMEV 584
G +VD+ +S ++ +A ++ + + D + W AL+S ++ V
Sbjct: 283 MGFASDACVSCGLVDMYAKS-NIEQAMDYANKVFERMRKNDVISWTALISG---YVQSGV 338
Query: 585 GERAAQKMFG 594
E +FG
Sbjct: 339 QENKVMVLFG 348
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/475 (36%), Positives = 264/475 (55%), Gaps = 15/475 (3%)
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T+ VI+AC G +VH ++K GFE D I +LI Y + A +++
Sbjct: 2 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFE 339
+ + + N++I+G + G + ++F+R+ + IS+N++I GYA+ G++D++KRLF+
Sbjct: 62 SDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFD 121
Query: 340 KMPHRSIISLNTMIS-------------VIPEME-RNPVTWNSMISGYVQNNLHEKALQL 385
+MP R+++S N+M+S + EM R+ V+WNSM++ Y Q +AL L
Sbjct: 122 EMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALAL 181
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ MR + + T +T L AC+ LG+L +G LH ++ E N VGT+LVDMY++
Sbjct: 182 FDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAK 241
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CG I+ A F+++ S +V AW ++ G + HG EA LF+ M E + PN TFV +
Sbjct: 242 CGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAM 301
Query: 506 LSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
LSAC AG+V+EG K+ M SYG+ P +EHY CV+DLL R+G L EA E I MP+E
Sbjct: 302 LSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEP 361
Query: 565 DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRK 624
+ GALL C N E+GE +++ L Y++LSNIYA KW +R
Sbjct: 362 NPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRN 421
Query: 625 RLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSVVLF 679
+ + K PG S IEL VH F D ++P N IY L + L S + +
Sbjct: 422 LMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKSAIGY 476
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 205/432 (47%), Gaps = 70/432 (16%)
Query: 31 NGQ-LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
NG+ L A+ LF R VVSWN M+ GY K + + + M
Sbjct: 47 NGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM-------------- 92
Query: 90 ILSVCAQL---NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
VC + N++I+G YA +I+EAKR+FDE+
Sbjct: 93 ---VCRDVISWNTIING-------------------------YAIVGKIDEAKRLFDEMP 124
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
E N + W+ ML G+V+C + +AF +F +MP +DVV W +++ YA+ E AL LF
Sbjct: 125 ERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNE-ALALFD 183
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
MR G P E T S++ ACA LGA +G +H + E + +G AL++ Y C
Sbjct: 184 QMRAVGVK-PTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKC 242
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMI 322
A +V++ +E+ + A N++I G+ G +++A+ +F + EA N I++ +M+
Sbjct: 243 GKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAML 302
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
+ G VD+ ++L + M ++ + P++E ++ +I + L E+A
Sbjct: 303 SACSHAGMVDEGQKLLDCM--------SSSYGIEPKVEH----YDCVIDLLARAGLLEEA 350
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVD 441
++L TM ++ S L C G+ + G+++ L+ P S Y+ L +
Sbjct: 351 MELIGTM---PMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYI--LLSN 405
Query: 442 MYSRCGSINDAQ 453
+Y+ +DA+
Sbjct: 406 IYAAAKKWDDAR 417
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 158/353 (44%), Gaps = 48/353 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS N ++ + G + A LF +MP R VVSWN+ML Y++ K +E+L+L
Sbjct: 125 ERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQ 184
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M VK E T ++LS CA L +L G +H + + E VG+ L+ YA C +
Sbjct: 185 MRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGK 244
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I A +VF+ M KDV+ W +I+G A
Sbjct: 245 ISLATQVFN-------------------------------AMESKDVLAWNTIIAGMA-- 271
Query: 195 VDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFD 252
+ G ++A +LF+ M+E+ PN+ TF +++ AC+ G EG K++ + G E
Sbjct: 272 IHGHVKEAQQLFKEMKEASVE-PNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPK 330
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNR-- 309
+I+ + AM + + P +A +L+ G G E E++ R
Sbjct: 331 VEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLI 390
Query: 310 -LTEANSISYNSMIKGYAVYGQVDDSKRL--------FEKMPHRSIISLNTMI 353
L +S Y + YA + DD++++ K+P S+I L M+
Sbjct: 391 NLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMV 443
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 185/403 (45%), Gaps = 37/403 (9%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T+ ++ C + + G +H V+KSG+EC ++ + L+ YAN ++ AK++F
Sbjct: 2 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ + + W+ M+ GYV+ M VF +M +DV+ W +I+GYA V ++A +LF
Sbjct: 62 SDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYA-IVGKIDEAKRLF 120
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M E N +++S++ + G E GL + D +++ Y
Sbjct: 121 DEMPER-----NLVSWNSMLSGFVKCGNVEEA---FGLFSEMPCR-DVVSWNSMLACYAQ 171
Query: 266 CEAFDGAMRVYDRLE----NPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSIS 317
C + A+ ++D++ P SL++ +G ++ I + E NSI
Sbjct: 172 CGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIV 231
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+++ YA G++ + ++F M + +++ WN++I+G +
Sbjct: 232 GTALVDMYAKCGKISLATQVFNAMESKDVLA-----------------WNTIIAGMAIHG 274
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ-LLHAHLVKTPFESNVYVG 436
++A QL+ M++ +++ TF + ACS G + +GQ LL E V
Sbjct: 275 HVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHY 334
Query: 437 TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
++D+ +R G + +A ++ PN +A AL+ G HG
Sbjct: 335 DCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHG 377
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 210/702 (29%), Positives = 339/702 (48%), Gaps = 96/702 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVS 73
++++ N ++ + ++ AR LFD+M R VVSWN+++ YS + E+L L
Sbjct: 42 DSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFR 101
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M ++ V N T L C + G +IH +LKS +V + L+ +
Sbjct: 102 EMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFG 161
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++ A R+FDEL E KD + W +I+G+ +
Sbjct: 162 KMSYAARIFDELDE-------------------------------KDNITWNSMIAGFTQ 190
Query: 194 SVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+G +AL+ F ++++ P+E + S++ A RLG GK +H +K + +
Sbjct: 191 --NGLYNEALQFFCGLQDANLK-PDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSN 247
Query: 253 ESIGGALIEFY--CGCEAFDGAMRVYDRL----------------ENPCLNASNSLINGL 294
IG LI+ Y C C A+ G V+D++ +N C + L+ +
Sbjct: 248 LRIGNTLIDMYSKCCCVAYAGL--VFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKV 305
Query: 295 ISMGRIEDAELIFNRLTEANSIS----------------------YNSMIKGYAVYGQVD 332
+ G D +I + L + + N +I YA G ++
Sbjct: 306 QTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVYADCGNIN 365
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+ R+FE + + ++S W SMIS YV N L +AL ++ M++
Sbjct: 366 YATRMFESIKCKDVVS-----------------WTSMISCYVHNGLANEALGVFYLMKET 408
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+++ T + A + L +L +G+ +H + + F SLVDMY+ CGS+ +A
Sbjct: 409 SVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENA 468
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
F S ++ WT ++N Y HG G AV LF IM +Q ++P+ TF+ +L AC +
Sbjct: 469 YKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHS 528
Query: 513 GLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GL+NEG ++ +MK Y + P EHY C+VDLLGR+ HL EA F+K M IE A VW A
Sbjct: 529 GLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCA 588
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
L AC N ++GE AAQK+ LD +YV++SN++A G+W ++R R+ +
Sbjct: 589 FLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGL 648
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
KK+PGCSWIE+ ++VH F V D+++P IY L +T L
Sbjct: 649 KKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKL 690
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 146/559 (26%), Positives = 255/559 (45%), Gaps = 67/559 (11%)
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V + TF +L C + + G +IH L++K GY+ FV + L+ YA C +I A+
Sbjct: 6 VPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGAR 65
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-C 198
++FD ++E N DVV W +IS Y S++G C
Sbjct: 66 KLFDRMNERN------------------------------DVVSWNSIISAY--SLNGQC 93
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+AL LFR M+++G N YT + ++AC G +H ++K D + A
Sbjct: 94 MEALGLFREMQKAGVG-ANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANA 152
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN---- 314
L+ + A R++D L+ NS+I G G +A F L +AN
Sbjct: 153 LVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPD 212
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS----LNTMISVIPE------------ 358
+S S++ G + + K + + S NT+I + +
Sbjct: 213 EVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFD 272
Query: 359 --MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
+ ++ ++W ++I+ Y QNN H +AL+L ++ +D ACS L L
Sbjct: 273 KMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSH 332
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
+ +H + +K S++ + ++D+Y+ CG+IN A F SI +V +WT++++ Y H
Sbjct: 333 AKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVH 391
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
+GL +EA+ +F +M E + P++ T V +LSA +N+G +I + G +
Sbjct: 392 NGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGST 451
Query: 537 YTCVVDLLGRSGHLHEAEE-FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
+VD+ G L A + FI L V+W +++A M +AA ++F +
Sbjct: 452 VNSLVDMYACCGSLENAYKVFICTRSKSL--VLWTTMINA----YGMHGRGKAAVELFSI 505
Query: 596 --DKKPISAYV-ILSNIYA 611
D+K I ++ L+ +YA
Sbjct: 506 MEDQKLIPDHITFLALLYA 524
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 128/280 (45%), Gaps = 13/280 (4%)
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
MR L + TF + AC + + +G +H ++K ++S V+V SLV MY++C
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 449 INDAQASFSSISSPN-VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
I A+ F ++ N V +W ++++ YS +G EA+ LF M + + N T V L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 508 ACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
AC + GM+I ++ V + +V + R G + A ++ E D +
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELD-EKDNI 179
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGL-DKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
W ++++ F N E A Q GL D V L +I A G+ G ++ ++
Sbjct: 180 TWNSMIAG--FTQNGLYNE-ALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKE-- 234
Query: 627 THLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
H K+ W++ N R+ ++ D + C V YA L
Sbjct: 235 IHAYAMKN----WLDSNLRI-GNTLIDMYSKCCCVAYAGL 269
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 197/679 (29%), Positives = 330/679 (48%), Gaps = 65/679 (9%)
Query: 22 NKAITECGRNGQ--LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N+ +T R+ L AR +FD++P R VSWN +L ++ E+ L+ MH
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQG 88
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ N + L A G Q+ L LKSG F S LL YA C + +A+
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+VFD + E N + W+ ++ GY + M+ A ++F++M ++ +V
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLV----------------- 191
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
P+E TF S++ A F + +HG ++K G ++ A
Sbjct: 192 ----------------PDEATFASLLTAVEGPSCFLMHQ-LHGKIVKYGSALGLTVLNAA 234
Query: 260 IEFYCGCEAFDGAMRVYDRLEN-PCLNASNSLINGLISMGRIEDAELIFNRLTEANSI-- 316
I Y C + + R++D + + L + N+++ G ++A F R+ + + +
Sbjct: 235 ITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHP 294
Query: 317 ---SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS-----LNTMISVIPEMERN------ 362
S+ S+I + +G D R+ + +S + N +I++ N
Sbjct: 295 DMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDA 354
Query: 363 -----------PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
V+WNSM++GY Q+ L AL+ + M + FS + S L
Sbjct: 355 YKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSEL 414
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
LQ G+ +H ++ + F SN +V +SL+ MYS+ G I+DA+ SF + W A++
Sbjct: 415 AVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMI 474
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGV 530
GY+ HG +LF ML++ + TFVG++++C AGLV+EG +I +M++ YGV
Sbjct: 475 FGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGV 534
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
+EHY C VDL GR+G L +A++ I MP E DA+VW LL AC N+E+ A
Sbjct: 535 PLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVAS 594
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
+F + + S YV+LS++Y+ LG W + +++ + + K PG S IE+ + VH+F+
Sbjct: 595 HLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSLIEVKNEVHSFN 654
Query: 651 VEDRNNPNCNVIYATLEHL 669
ED+++P + IY L L
Sbjct: 655 AEDKSHPKMDEIYEMLRVL 673
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 190/648 (29%), Positives = 332/648 (51%), Gaps = 82/648 (12%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
+G + AR +FD++P +V WNTM+ GYS+ + +SL M N+K + TF +
Sbjct: 82 SGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFL 141
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGY-ECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
L + +L GK + + G+ + FV G + ++ C + A+++FD
Sbjct: 142 LKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFD------ 195
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
M D ++V V W ++SGY + E++ +LF M
Sbjct: 196 ----------------MGDGWEV---------VTWNVVLSGYNR-FKRYEESKRLFIEME 229
Query: 210 ESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ E + PN T ++ AC++L GK ++ IK G
Sbjct: 230 KKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEG-------------------- 269
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
+ P L N+LI+ S G ++ A +F+ + + IS+ S++ G+A
Sbjct: 270 ----------IVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANT 319
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
++D +++ F++MP ER+ V+W +MI GY++ N ++ L L+
Sbjct: 320 CRIDLARKYFDQMP-----------------ERDYVSWTAMIDGYLRMNRFKEVLTLFRD 362
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M+ + T + AC+ LG+L+ G+ ++ K +++ ++G +L+DMY +CG+
Sbjct: 363 MQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGN 422
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+ A+ F+ + + WTA++ G +++G G EA+ +F MLE + P+ T++GV+ A
Sbjct: 423 VEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCA 482
Query: 509 CVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C GLV +G F +M +G+ P L HY C+VDLLGR+GHL EA E I +MP++ +++
Sbjct: 483 CTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSI 542
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
VWG+LL AC N+++ E AA ++ L+ + + YV+L NIYA KW ++RK +
Sbjct: 543 VWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMM 602
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
+KK PGCS +E+N V+ F D+++P IYA LE++ +L++
Sbjct: 603 ERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSN 650
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 33/221 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S +T ++ AR FDQMP R VSW M+ GY + +F E L+L M
Sbjct: 306 VISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQM 365
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
SNVK +E T +IL+ CA L +L G+ + K+ + F+G+ L+ Y C +E+
Sbjct: 366 SNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEK 425
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AK++F+E+ + ++ W+ M+VG +G+
Sbjct: 426 AKKIFNEMQKKDKFTWTAMIVGLAN--------------------------NGHG----- 454
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
E+AL +F +M E+ P+E T+ V+ AC +G +GK
Sbjct: 455 -EEALTMFSYMLEASVT-PDEITYIGVMCACTHVGLVAKGK 493
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 200/727 (27%), Positives = 348/727 (47%), Gaps = 136/727 (18%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ +L A LF +MP R +VSWNT++ ++ ++L + M R T ++
Sbjct: 83 KASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLAS 142
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C L + G++ H + +K G + +VG+ LL YA
Sbjct: 143 VLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYA------------------- 183
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+C + DA F +P+ + V +T ++ G A S D +A +LFR M
Sbjct: 184 ------------KCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADS-DQVNEAFRLFRLML 230
Query: 210 ESGENMPNEYTFDSVIRACAR--------------LGAFCEGKVVHGLLIKCGFEFDESI 255
+ ++ + + SV+ C+R L + G+ VH L IK GFE D +
Sbjct: 231 RNRIHV-DSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHL 289
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL--------------------- 294
+L++ Y D A ++ + + + N +I G
Sbjct: 290 NNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGF 349
Query: 295 --------------ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
I G IE +F+ ++ + S+N+++ GY+ ++ +LF +
Sbjct: 350 EPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFRE 409
Query: 341 MPHRSI----ISLNTMISVIPEM------------------------------------- 359
M RS+ +L ++S + M
Sbjct: 410 MQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGK 469
Query: 360 ------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
E + V WNSM++G N+L ++A + MR+ + ++ +++ +
Sbjct: 470 VEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSC 529
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ L SL QG+ +H+ + + + ++ +VG++L+DMYS+CG ++ A+ F + N W
Sbjct: 530 CAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTW 589
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
+++GY+ +G G EAVLL+E M+ P+ TFV VL+AC +GLV+ G+KIF SM+
Sbjct: 590 NEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQ 649
Query: 528 -YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+GV P ++HYTC++D LGR+G LHEAE I MP + D ++W LLS+C + ++ +
Sbjct: 650 EHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLAR 709
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
RAA+++F LD + + YV+L+NIY+ LG+W +R+ +++ +V KDPG SWIE + +
Sbjct: 710 RAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGM 769
Query: 647 HAFSVED 653
AF V+D
Sbjct: 770 QAFMVDD 776
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/622 (22%), Positives = 280/622 (45%), Gaps = 115/622 (18%)
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
T +++L C + + GK IH +L+S F+ + L+ FYA C I+ ++R+FD+
Sbjct: 6 TYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQ 65
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALK 203
+ + + W+ +L Y + + + DA +F +MP++++V W LIS + +G E KAL
Sbjct: 66 MPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTR--NGFEQKALG 123
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
++ M G +P +T SV+ AC L G+ HG+ IK G + + +G AL+ Y
Sbjct: 124 VYYRMSREG-FVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMY 182
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF-----NRLTEANSISY 318
C A++ + + P + +++ GL ++ +A +F NR+ +S+S
Sbjct: 183 AKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRI-HVDSVSL 241
Query: 319 NSM------------------------IKGYAVY-------------------------G 329
+S+ + G V+ G
Sbjct: 242 SSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNG 301
Query: 330 QVDDSKRLFEKMPHRSIISLNTMIS----------VIPEMER--------NPVTWNSMI- 370
+D ++ +F MP S++S N MI+ I ++R + +T+ +M+
Sbjct: 302 NMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLV 361
Query: 371 ----SGYVQ--------------------------NNLHEKALQLYMTMRKLAIDRTRST 400
SG ++ N H++A++L+ M+ ++ R+T
Sbjct: 362 ACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTT 421
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+++ + + + L+ G+ +HA K F +++Y+ + L+ MYS+CG + A+ F I+
Sbjct: 422 LAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIA 481
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
++ W ++M G S + L EA F+ M E+ + P+ ++ VLS C + +++G +
Sbjct: 482 ELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQ 541
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWM 580
+ + G + + ++D+ + G + +A ++ DM + + V W ++ +
Sbjct: 542 VHSQIAREGYMNDAFVGSALIDMYSKCGDV-DAARWVFDMMLGKNTVTWNEMIHG---YA 597
Query: 581 NMEVGERAA---QKMFGLDKKP 599
G+ A + M G +KP
Sbjct: 598 QNGCGDEAVLLYEDMIGSGEKP 619
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 210/479 (43%), Gaps = 86/479 (17%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
+ C ++G + R +FD M ++ SWNT+L GYS+ E++ L M +V +
Sbjct: 360 LVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDR 419
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
TT + ILS A + L G+Q+H + K+ + ++ SGL+ Y+ C ++E AKR+FD
Sbjct: 420 TTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDR 479
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ E + + W+ M+ G +L +AF F KM +K +
Sbjct: 480 IAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGM----------------------- 516
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
P+++++ +V+ CA+L + +G+ VH + + G+ D +G ALI+ Y
Sbjct: 517 ----------FPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYS 566
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG 324
C G ++ A +F+ + N++++N MI G
Sbjct: 567 KC-------------------------------GDVDAARWVFDMMLGKNTVTWNEMIHG 595
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER-NPVTWNSMISGYVQNNLHEKAL 383
YA G D++ L+E M I E+ + +T+ ++++ + L + +
Sbjct: 596 YAQNGCGDEAVLLYEDM--------------IGSGEKPDGITFVAVLTACSHSGLVDTGI 641
Query: 384 QLYMTMRK-LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD- 441
+++ +M++ ++ ++ + + G L + ++L + K P + + + L+
Sbjct: 642 KIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVL---IDKMPCKYDPIIWEVLLSS 698
Query: 442 --MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
+Y+ A + N A + L N YS G +A + E+M +V +
Sbjct: 699 CRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKD 757
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 187/598 (31%), Positives = 317/598 (53%), Gaps = 27/598 (4%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE-FVGSGLLFFYANCFEIEEAKRV 141
N +++ +L C + N ++ K++ + Y+ + F+ + LL YA + +A+ +
Sbjct: 21 NSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDL 80
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-K 200
FD++ + W+ ML Y + + D VF +M D V + +I+G+ S +GC +
Sbjct: 81 FDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGF--SGNGCSSQ 138
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL+ F M+E G +YT SV+ AC++L GK +HG ++ + AL
Sbjct: 139 ALEFFVRMQEEGFE-STDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALT 197
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSI 316
Y C A D A ++DR+ N + + NS+I+G + G+ E +F + + + +
Sbjct: 198 NMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQV 257
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
+ ++++ Y G +D++ + F ++ E++ V W +M+ G QN
Sbjct: 258 TISNILSAYFQCGYIDEACKTFREIK-----------------EKDKVCWTTMMVGCAQN 300
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
E AL L+ M + T S + +C+ L SL QGQ +H V + ++ V
Sbjct: 301 GKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVS 360
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
++LVDMYS+CG DA F + + NV +W +++ GY+ +G EA+ L+E ML +++
Sbjct: 361 SALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLK 420
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P+ TFVGVLSAC+ AGLV G F S+ K +G+ PT +HY+C+++LLGR+G++ +A +
Sbjct: 421 PDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVD 480
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
IK M E + ++W LLS C ++ GE AA+ +F LD Y++LSNIYA G+
Sbjct: 481 LIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGR 540
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
W +R + + ++KK SWIE++++VH F EDR + IY L L L
Sbjct: 541 WKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKL 598
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 221/512 (43%), Gaps = 99/512 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N ++ ++G + R +FDQM + VS+NT++ G+S ++L M
Sbjct: 89 VFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQE 148
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + T ++L C+QL + GKQIH ++ + FV + L YA C +++
Sbjct: 149 EGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQ 208
Query: 138 AKRVFDELHEDNELLWSLMLVGYV-----------------------------------Q 162
A+ +FD + N + W+ M+ GY+ Q
Sbjct: 209 ARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQ 268
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM-PNEYTF 221
C + +A F ++ +KD V WT ++ G A++ E AL LFR M EN+ P+ +T
Sbjct: 269 CGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKE-EDALLLFREMLL--ENVRPDNFTI 325
Query: 222 DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
SV+ +CARL + C+G+ VHG + G + D + AL++ Y C
Sbjct: 326 SSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKC--------------- 370
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
G DA ++F R+ N IS+NSMI GYA G+ ++ L+E+M
Sbjct: 371 ----------------GETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEM 414
Query: 342 PHRSIISLN-TMISVIPE------MER--------------NPV--TWNSMISGYVQNNL 378
H ++ N T + V+ +ER NP ++ MI+ +
Sbjct: 415 LHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGY 474
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGT 437
+KA+ L ++ + + +S L C + G++ HL + P + Y+
Sbjct: 475 MDKAVDL---IKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYI-- 529
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
L ++Y+ CG D A S + + + + A
Sbjct: 530 MLSNIYAACGRWKDVAAVRSLMKNNKIKKFAA 561
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 202/665 (30%), Positives = 334/665 (50%), Gaps = 64/665 (9%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
++ A +F+ + + V WN M+ GY+ + + + L M S +++ TF+++LS
Sbjct: 377 KMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
CA + L G Q H +++K FVG+ L+ YA C +E
Sbjct: 437 TCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE---------------- 480
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
DA +F +M +D V W +I Y + + E A LF+ M G
Sbjct: 481 ---------------DARQIFERMCDRDNVTWNTIIGSYVQDENESE-AFDLFKRMNLCG 524
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+ + S ++AC + +GK VH L +KCG + D G +LI+ Y C A
Sbjct: 525 -IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN----RLTEANSISYNSMIK----- 323
+V+ L + + N+LI G S +E+A ++F R + I++ ++++
Sbjct: 584 RKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKP 642
Query: 324 -----GYAVYGQVDDSKRLFEKMPHRSIISLNTMI----------SVIPEME--RNPVTW 366
G +GQ+ +KR F ISL M ++ E+ ++ V W
Sbjct: 643 ESLTLGTQFHGQI--TKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLW 700
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
M+SG+ QN +E+AL+ Y MR + ++TF + CS L SL++G+ +H+ +
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS-PNVAAWTALMNGYSHHGLGSEAVL 485
+ + +L+DMY++CG + + F + NV +W +L+NGY+ +G +A+
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALK 820
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
+F+ M + I+P+ TF+GVL+AC AG V++G KIF M YG+ ++H C+VDLL
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR G+L EA++FI+ ++ DA +W +LL AC + GE +A+K+ L+ + SAYV
Sbjct: 881 GRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYV 940
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+LSNIYA G W K +RK + VKK PG SWI++ R H F+ D+++ I
Sbjct: 941 LLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEM 1000
Query: 665 TLEHL 669
LE L
Sbjct: 1001 FLEDL 1005
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 168/622 (27%), Positives = 275/622 (44%), Gaps = 102/622 (16%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
Q+ A FD + + V +WN+ML YS K + L ++ + + N+ TFS +L
Sbjct: 109 AQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVL 167
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S CA+ ++ G+QIHC ++K G E + G L+ YA C I +A+RVF+ + + N +
Sbjct: 168 STCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTV 227
Query: 152 LWSLMLVGYVQCNL-----------------------------------MSDAFDVFIKM 176
W+ + GYV+ L + DA +F +M
Sbjct: 228 CWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM 287
Query: 177 PKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFC 235
DVV W +ISG+ K GCE A++ F MR+S T SV+ A +
Sbjct: 288 SSPDVVAWNVMISGHGKR--GCETVAIEYFFNMRKSSVK-STRSTLGSVLSAIGIVANLD 344
Query: 236 EGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI 295
G VVH IK G + +G +L+ Y CE + A +V++ LE N++I G
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYA 404
Query: 296 SMGR-----------------IED----------------------AELIFNRLTEANSI 316
G I+D +I + N
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF 464
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
N+++ YA G ++D++++FE+M +R+ VTWN++I YVQ+
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERM-----------------CDRDNVTWNTIIGSYVQD 507
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
+A L+ M I + + AC+ + L QG+ +H VK + +++ G
Sbjct: 508 ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTG 567
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+SL+DMYS+CG I DA+ FSS+ +V + AL+ GYS + L EAV+LF+ ML + +
Sbjct: 568 SSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVN 626
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG---RSGHLHEA 553
P+ TF ++ AC + + G + + G E+ + LLG S + EA
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG--ISLLGMYMNSRGMTEA 684
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
++ V+W ++S
Sbjct: 685 CALFSELSSPKSIVLWTGMMSG 706
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 149/589 (25%), Positives = 264/589 (44%), Gaps = 96/589 (16%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G+L AR LF +M VV+WN M+ G+ K ++ M +S+VK +T +
Sbjct: 273 RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS + +L G +H +K G +VGS L+ Y+ C ++E A +VF+ L E N
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
++ W+ M I GYA + + K ++LF M+
Sbjct: 393 DVFWNAM-------------------------------IRGYAHNGES-HKVMELFMDMK 420
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
SG N+ +++TF S++ CA G H ++IK + +G AL++ Y C A
Sbjct: 421 SSGYNI-DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS------------ 317
+ A ++++R+ + N++I + +A +F R+ +S
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 318 ---------------------------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
+S+I Y+ G + D++++F +P S++S+
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM- 598
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
N++I+GY QNNL E+A+ L+ M ++ + TF+ + AC
Sbjct: 599 ----------------NALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHK 641
Query: 411 LGSLQQGQLLHAHLVKTPFES-NVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWT 468
SL G H + K F S Y+G SL+ MY + +A A FS +SSP ++ WT
Sbjct: 642 PESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWT 701
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
+M+G+S +G EA+ ++ M ++P+ ATFV VL C + EG I + +
Sbjct: 702 GMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLI--F 759
Query: 529 GVVPTLEHYT--CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ L+ T ++D+ + G + + + +M + V W +L++
Sbjct: 760 HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 234/546 (42%), Gaps = 96/546 (17%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +F++M R V+WNT++ Y + E+ L M+ + + ++ L
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C ++ L GKQ+HCL +K G + GS L+ Y+ C I++A++VF L E
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPE---- 592
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS VV LI+GY++ + E+A+ LF+ M
Sbjct: 593 -WS--------------------------VVSMNALIAGYSQ--NNLEEAVVLFQEMLTR 623
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD-ESIGGALIEFYCGCEAFD 270
G N P+E TF +++ AC + + G HG + K GF + E +G +L+ Y
Sbjct: 624 GVN-PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMT 682
Query: 271 GAMRVYDRLENP-CLNASNSLINGLISMGRIEDA-------------------------- 303
A ++ L +P + +++G G E+A
Sbjct: 683 EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVC 742
Query: 304 -------------ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
LIF+ + + ++ N++I YA G + S ++F++M RS
Sbjct: 743 SVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS----- 797
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
N V+WNS+I+GY +N E AL+++ +MR+ I TF + ACS
Sbjct: 798 -----------NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSH 846
Query: 411 LGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWT 468
G + G+ + ++ + E+ V +VD+ R G + +A + + P+ W+
Sbjct: 847 AGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWS 906
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
+L+ HG + E ++E + N++ +V + + G + + + M+
Sbjct: 907 SLLGACRIHGDDIRGEISAEKLIELE-PQNSSAYVLLSNIYASQGCWEKANALRKVMRDR 965
Query: 529 GV--VP 532
GV VP
Sbjct: 966 GVKKVP 971
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 7/230 (3%)
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+E++ WNSM+S Y K L+ ++++ + I + TFS++ C+ +++ G+
Sbjct: 121 LEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGR 180
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H ++K E N Y G +LVDMY++C I+DA+ F I PN WT L +GY G
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 240
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
L EAVL+FE M ++ P+ FV V++ +R G + + +F M S P + +
Sbjct: 241 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWN 296
Query: 539 CVVDLLGRSGHLHEAEEFIKDM---PIELDAVVWGALLSACWFWMNMEVG 585
++ G+ G A E+ +M ++ G++LSA N+++G
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 172/427 (40%), Gaps = 90/427 (21%)
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
GK VH + G + + +G A+++ Y C A + +D LE + A NS+++ S
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKD-VTAWNSMLSMYSS 137
Query: 297 MGR----------IEDAELIFNRLT-----------------------------EANSIS 317
+G+ + + ++ N+ T E NS
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 318 YNSMIKGYAVYGQVDDSKRLFE--------------------KMPHRSIISLNTM----- 352
+++ YA ++ D++R+FE +P +++ M
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 353 -------ISVIPEMER-----------------NPVTWNSMISGYVQNNLHEKALQLYMT 388
++VI R + V WN MISG+ + A++ +
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFN 317
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
MRK ++ TRST + A + +L G ++HA +K SN+YVG+SLV MYS+C
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+ A F ++ N W A++ GY+H+G + + LF M + TF +LS
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 509 CVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
C + + G + + + L +VD+ + G L +A + + M + D V
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVT 496
Query: 569 WGALLSA 575
W ++ +
Sbjct: 497 WNTIIGS 503
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 23/270 (8%)
Query: 353 ISVIPEMERNPVTWNSMISGYV---QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
+S P++ R I G+V + +H++ L++ + KL ++R F + +
Sbjct: 23 LSYSPDLGRR-------IYGHVLPSHDQIHQRLLEICLGQCKLF--KSRKVFDEMPQRLA 73
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+L+ G+ +H+ + +S +G ++VD+Y++C ++ A+ F + +V AW +
Sbjct: 74 L--ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNS 130
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
+++ YS G + + F + E I PN TF VLS C R V G +I SM G
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ +VD+ + + +A + + ++ + V W L S ++ + E A
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARR-VFEWIVDPNTVCWTCLFSG---YVKAGLPEEAV 246
Query: 590 ---QKMFGLDKKPIS-AYVILSNIYAVLGK 615
++M +P A+V + N Y LGK
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVINTYIRLGK 276
>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Glycine max]
Length = 715
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 208/699 (29%), Positives = 347/699 (49%), Gaps = 66/699 (9%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
L T + +Q + N ++ R G L + +FD+MP RT+VS+N +L YS+
Sbjct: 35 LILTTTTAFTSQSPFVY--NNILSMYARCGSLTDSHLVFDKMPRRTIVSYNALLAAYSRA 92
Query: 63 AKFD--ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYE--CF 118
+ +L L + M + ++ + TTF+++L + L G +H K G C
Sbjct: 93 SPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWFGSSLHAKGFKLGLNDICL 152
Query: 119 EFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK 178
+ + LL Y+NC ++ A+ VF W M
Sbjct: 153 Q---TSLLNMYSNCGDLSSAELVF----------WD---------------------MVD 178
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+D V W LI GY K+ + E+ + LF M G P ++T+ V+ +C+RL + G+
Sbjct: 179 RDHVAWNSLIMGYLKN-NKIEEGIWLFIKMMSVG-FAPTQFTYCMVLNSCSRLKDYRSGR 236
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
++H +I D + AL++ YC A R++ R+ENP L + NS+I G
Sbjct: 237 LIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENE 296
Query: 299 RIEDAELIFNRLTE-----ANSISYNSMIKGYAVYGQVDDSKRLFEKMP----HRSIISL 349
E A +F +L E + +Y +I V+ K L ++ RS+
Sbjct: 297 DGEKAMNLFVQLQEMCFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVG 356
Query: 350 NTMISVIPEME--------------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
+T++S+ + ++ V W MI+GY + A++ + M +
Sbjct: 357 STLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHE 416
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
S + +AC+ L L+QG+++H + VK ++ + V SL+DMY++ GS+ A
Sbjct: 417 VDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLV 476
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
FS +S P++ W +++ GYSHHG+ EA+ +FE +L+Q ++P+ TF+ +LSAC + LV
Sbjct: 477 FSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSACSHSRLV 536
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP-IELDAVVWGALLS 574
+G ++ M S G++P L+HY+C+V L R+ L EAEE I P IE + +W LLS
Sbjct: 537 EQGKFLWNYMNSIGLIPGLKHYSCMVTLFSRAALLEEAEEIINKSPYIEDNLELWRTLLS 596
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
AC N +VG AA+++ L + V+LSN+YA KW K +IR+ + L + K
Sbjct: 597 ACVINKNFKVGIHAAEEVLRLKAEDGPTLVLLSNLYAAARKWDKVAEIRRNMRGLMLDKY 656
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
PG SWIE + +H FS D+++P + ++A L L N+
Sbjct: 657 PGLSWIEAKNDIHVFSSGDQSHPKADEVHAELHRLKRNM 695
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 17/180 (9%)
Query: 404 LFHACSCLGSLQQGQLLHAHLV--KTPFES-NVYVGTSLVDMYSRCGSINDAQASFSSIS 460
L CS + SL++ + LHA ++ T F S + +V +++ MY+RCGS+ D+ F +
Sbjct: 16 LLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKMP 75
Query: 461 SPNVAAWTALMNGYS----HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+ ++ AL+ YS +H + A+ L+ M+ + P++ TF +L +A +
Sbjct: 76 RRTIVSYNALLAAYSRASPNHAIS--ALELYTQMVTNGLRPSSTTFTSLL----QASSLL 129
Query: 517 EGMKIFRSMKSYGVVPTLEH---YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
E S+ + G L T ++++ G L AE DM ++ D V W +L+
Sbjct: 130 EHWWFGSSLHAKGFKLGLNDICLQTSLLNMYSNCGDLSSAELVFWDM-VDRDHVAWNSLI 188
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 183/592 (30%), Positives = 310/592 (52%), Gaps = 59/592 (9%)
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGY--ECFEFVGSGLLFF--YANCFEIEEAKRVFDE 144
++L C LI Q+H L++K+ E + F G LL F + N + A+++FD
Sbjct: 36 SLLQNCKNPKDLI---QLHTLLIKTSLIKEKYAF-GRLLLSFASFDNLGSLNYAQKLFDT 91
Query: 145 LH-EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ N +++ M+ Y +AF + +M V+
Sbjct: 92 VDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVY------------------- 132
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
PN++TF V AC++ EGK H +IK FEF +L++FY
Sbjct: 133 ------------PNDFTFTYVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFY 180
Query: 264 CGC-EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI 322
E RV+D++E P + + N LING + G +++A +F+ + E + +S+ M+
Sbjct: 181 GKVGEVGIVVRRVFDKIEGPDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIML 240
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
GYA G + ++ LF++MP +RN V+W+++I GY+Q + KA
Sbjct: 241 VGYADAGFLSEASCLFDEMP-----------------KRNLVSWSALIKGYIQIGCYSKA 283
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L+L+ M+ + + L AC+ LG+L QG+ LH ++ K + + ++ T+L+DM
Sbjct: 284 LELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDM 343
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
YS+CG I+ A F V W++++ G + H G +A+ LF M+E I P+ T+
Sbjct: 344 YSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKAIELFAKMIECGIEPSEITY 403
Query: 503 VGVLSACVRAGLVNEGMKIF-RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+ +L+AC +GLV+ G++IF R +++ P ++HY C+VDLLGR+G LH+A ++ MP
Sbjct: 404 INILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMP 463
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
++ D +W ALLSAC N+E+GE+ + + ++ + YV+ SN+YA + +W
Sbjct: 464 VKADPAIWRALLSACKLHRNVELGEQVGRILIKMEPQNDMNYVLFSNVYAAVNRWDISGK 523
Query: 622 IRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+R+ + ++K+PGCS IELN VH F D ++P VIY L LT ++
Sbjct: 524 LRREMKVRGMQKNPGCSSIELNGAVHEFVSRDHSHPQSQVIYELLHILTNHM 575
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 168/348 (48%), Gaps = 39/348 (11%)
Query: 32 GQLVTARNLFDQMPI-RTVVSWNTMLCGYSKWAKFDESLSLVSTM--HRSNVKLNETTFS 88
G L A+ LFD + I R + TM+ Y+ + E+ + S M + V N+ TF+
Sbjct: 80 GSLNYAQKLFDTVDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPNDFTFT 139
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE-EAKRVFDELHE 147
+ S C++ N + +GKQ H ++K +E + LL FY E+ +RVFD++
Sbjct: 140 YVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEG 199
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS------------- 194
+ + W+ ++ GYV+ + +A +F +MP++DVV WT ++ GYA +
Sbjct: 200 PDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDEM 259
Query: 195 ----------------VDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
GC KAL+LF+ M+ + M +E +++ ACARLGA +G
Sbjct: 260 PKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKM-DEVIVTTLLSACARLGALDQG 318
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
+ +H + K G + D + ALI+ Y C D A +V+ + + +S+I GL
Sbjct: 319 RWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMH 378
Query: 298 GRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
E A +F ++ E + I+Y +++ G VD ++F +M
Sbjct: 379 SFGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRM 426
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 115/234 (49%), Gaps = 10/234 (4%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A LFD+MP R +VSW+ ++ GY + + ++L L M + VK++E +T+L
Sbjct: 247 GFLSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLL 306
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S CA+L +L G+ +H + K G + + + L+ Y+ C I+ A +VF E +
Sbjct: 307 SACARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVF 366
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDV----VVWTKLISGYAKSVDGCEKALKLFRW 207
+WS M+ G + A ++F KM + + + + +++ S + L++F
Sbjct: 367 VWSSMIGGLAMHSFGEKAIELFAKMIECGIEPSEITYINILAACTHS-GLVDVGLQIFNR 425
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIGGALI 260
M E+ + P + ++ R G + +VV + +K D +I AL+
Sbjct: 426 MVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMPVKA----DPAIWRALL 475
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 304/557 (54%), Gaps = 28/557 (5%)
Query: 130 ANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM-PKKDVVVWTKLI 188
A + +A+R+FD + + + W+ ++ Y + ++ DA +F + +++VV WT L+
Sbjct: 46 AAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDRPDARRNVVTWTALL 105
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKC 247
SGYA++ ++A LF+ M E N ++++++ A G + + G+ ++
Sbjct: 106 SGYARA-GRVDEAEALFQRMPER-----NVVSWNTMLEAYTSAGRVRDAWTLFDGMPVR- 158
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
D L+ D A +++DR+ + A +++ G+ G +++A +F
Sbjct: 159 ----DAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALF 214
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS------------- 354
+ + E N +S+N+MI GYA ++D++ LF KMP R I S N MI+
Sbjct: 215 DGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQD 274
Query: 355 VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
+ +M RN +TW +M++GY+Q+ E ALQ++ M I + TF ACS L
Sbjct: 275 LFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAG 334
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L +GQ +H + KT F+ + ++ ++L+++Y++CG I A+ F +V +W ++
Sbjct: 335 LSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAA 394
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVP 532
Y+HHG+G EA+ L+E M E+ PN T+VG+LSAC +GLV+EG++IF M K +
Sbjct: 395 YAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAV 454
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
EHYTC++DL R+G L +A+ I + +E + VW ALL C N +G+ AA+ +
Sbjct: 455 RDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNL 514
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
+ Y +L NIYA GKW + IR + +KK PGCSWIE+ ++VH F
Sbjct: 515 LEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVENKVHVFVSR 574
Query: 653 DRNNPNCNVIYATLEHL 669
D+++ ++I + L+ +
Sbjct: 575 DKSHSESDLINSLLQDI 591
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 207/506 (40%), Gaps = 129/506 (25%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R+G + AR LFD+MP R V++W TM+ G ++ DE+ +L M NV
Sbjct: 172 RSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNV--------- 222
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
N++I G YA I+EA +F ++ +
Sbjct: 223 -----VSWNAMISG-------------------------YARNHRIDEAHDLFMKMPTRD 252
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
W++M+ G++Q + A D+F KMP+++V+ WT +++GY +S+ E AL++F M
Sbjct: 253 IASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQ-SETALQIFNGML 311
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G PN+ TF + AC+ L EG+ VH ++ K F+FD I L+ Y C
Sbjct: 312 VEGIR-PNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKC--- 367
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
G I A +F+ E + IS+N MI YA +G
Sbjct: 368 ----------------------------GEIRLARKVFDLSKEKDVISWNGMIAAYAHHG 399
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
++ L+EKM + GY N++
Sbjct: 400 VGVEAIHLYEKMQEK---------------------------GYKPNDV----------- 421
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG----TSLVDMYSR 445
T+ L ACS G + +G + ++VK + ++ V T L+D+ SR
Sbjct: 422 ----------TYVGLLSACSHSGLVDEGLRIFEYMVK---DRSIAVRDEHYTCLIDLCSR 468
Query: 446 CGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
G + DA+ + P+ W AL+ G + HG S L +LE + NA T+
Sbjct: 469 AGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAE-PNNAGTYTL 527
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGV 530
+ + AG E KI M G+
Sbjct: 528 LCNIYASAGKWKEAAKIRSEMNDRGL 553
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 153/339 (45%), Gaps = 48/339 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I S N IT ++ L A++LFD+MP R V++W TM+ GY + + + +L + + M
Sbjct: 253 IASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLV 312
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ N+ TF + C+ L L +G+Q+H ++ K+ ++ F+ S L+ YA C EI
Sbjct: 313 EGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRL 372
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++VFD E + + W+ M+ Y + +A ++ KM +K GY
Sbjct: 373 ARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEK----------GYK----- 417
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
PN+ T+ ++ AC+ G EG + ++K D SI
Sbjct: 418 ------------------PNDVTYVGLLSACSHSGLVDEGLRIFEYMVK-----DRSIAV 454
Query: 258 ALIEFYCGCEAFDGAMRVYD--RLEN-----PCLNASNSLINGLISMGRIEDAELIFNRL 310
+ C + A R+ D RL + P N+L+ G S G +L L
Sbjct: 455 RDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNL 514
Query: 311 TEA---NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
EA N+ +Y + YA G+ ++ ++ +M R +
Sbjct: 515 LEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGL 553
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 161/393 (40%), Gaps = 99/393 (25%)
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE--------- 312
FY A D V +++P N + L + GR+ DA +F+R +
Sbjct: 22 FYDSAAAVD----VSGHVQDP-----NRRVAELAAAGRVSDARRLFDRTPDRDVVSWTAL 72
Query: 313 -----------------------ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
N +++ +++ GYA G+VD+++ LF++MP R+++S
Sbjct: 73 VAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFQRMPERNVVSW 132
Query: 350 NTMISVIPEMER----------NPV----TWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
NTM+ R PV +WN +++ V++ +KA +L+ M +
Sbjct: 133 NTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRM----PE 188
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR---------- 445
R ++ + + GS+ + + L + E NV +++ Y+R
Sbjct: 189 RNVMAWTTMVAGIARSGSVDEARALFDGMP----ERNVVSWNAMISGYARNHRIDEAHDL 244
Query: 446 ----------------CGSIND-----AQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
G I D AQ F + NV WT +MNGY A+
Sbjct: 245 FMKMPTRDIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETAL 304
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM--KSYGVVPTLEHYTCVVD 542
+F ML + I PN TF+G + AC ++EG ++ + + S+ +E + +++
Sbjct: 305 QIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIE--STLMN 362
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
L + G + A + D+ E D + W +++A
Sbjct: 363 LYAKCGEIRLARKVF-DLSKEKDVISWNGMIAA 394
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 208/670 (31%), Positives = 337/670 (50%), Gaps = 64/670 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
GQ+ + N D + ++S N +L GY ++ L M S+++ ++ TF +L
Sbjct: 270 GQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVL 329
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ +L+SL G+Q+HC+ LK G + V + L+ Y +I A+ VF+ + E
Sbjct: 330 ATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSE---- 385
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+D++ W +I+G A+S D +A+ LF +
Sbjct: 386 ---------------------------RDLISWNSVIAGIAQS-DLEVEAVCLFMQLLRC 417
Query: 212 GENMPNEYTFDSVIRACARLG-AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G P+ YT SV++A + L K +H IK D + ALI+ Y
Sbjct: 418 GLK-PDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMK 476
Query: 271 GAMRVYDRLENPCLNASNSLINGLIS----MGRIEDAELIFNRLTEANSISYNSMIKGYA 326
A ++ R N L A N++++G +E L+ + ++ + +++K
Sbjct: 477 EAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCG 535
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISV---------------------IPEMERNPVT 365
++ K++ +S L+ +S IP + V
Sbjct: 536 FLFAINQGKQV-HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV--PDDVA 592
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
W ++ISG ++N E+AL ++ MR + + T + L A SCL +L+QG+ +HA+ +
Sbjct: 593 WTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 652
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K S+ +VGTSLVDMY++CGSI+DA F I N+ AW A++ G + HG G EA+
Sbjct: 653 KLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQ 712
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
LF+ M I P+ TF+GVLSAC +GLV+E K RSM + YG+ P +EHY+C+ D L
Sbjct: 713 LFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADAL 772
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G + EAE I M +E A ++ LL+AC + E G+R A K+ L+ SAYV
Sbjct: 773 GRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYV 832
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+LSN+YA KW + R + +VKKDPG SWIE+ +++H F V+DR+NP +IY
Sbjct: 833 LLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYK 892
Query: 665 TLEHLTANLN 674
++ + ++
Sbjct: 893 KVKDMIRDIK 902
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 143/618 (23%), Positives = 275/618 (44%), Gaps = 70/618 (11%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK-----FDESLSLVSTMH 76
N I+ + G L AR +FD+MP R +VSWN++L Y++ ++ E+ L +
Sbjct: 85 NNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILR 144
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ V + T S +L +C + + H K G + +FV L+ Y +++
Sbjct: 145 QDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVK 204
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD--------------VFIKMPKK--- 179
E + +F+E+ + +LW+LML Y++ +A D + +++ +
Sbjct: 205 EGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISG 264
Query: 180 ---------------------DVVVWTKLISGYAKSVDGCEKA-LKLFRWMRESGENMPN 217
+++ K++SGY + G A LK F M ES +
Sbjct: 265 DDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHA--GQYSALLKCFMDMVESDLEC-D 321
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
+ TF V+ RL + G+ VH + +K G + ++ +LI YC A V++
Sbjct: 322 QVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFN 381
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK-------GYA 326
+ L + NS+I G+ +A +F +L + + + S++K G +
Sbjct: 382 NMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLS 441
Query: 327 VYGQVD----DSKRLFEKMPHRSIISLNTMISVIPEME----RNP---VTWNSMISGYVQ 375
+ Q+ + + + ++I + + E E RN V WN+M+SGY Q
Sbjct: 442 LSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNFDLVAWNAMMSGYTQ 501
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
++ K L+L+ M K T + + C L ++ QG+ +HA+ +K+ ++ +++V
Sbjct: 502 SHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 561
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
+ ++DMY +CG ++ AQ +F SI P+ AWT L++G +G A+ +F M +
Sbjct: 562 SSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGV 621
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
+P+ T + A + +G +I + T +VD+ + G + +A
Sbjct: 622 LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYC 681
Query: 556 FIKDMPIELDAVVWGALL 573
K + + ++ W A+L
Sbjct: 682 LFKRIEM-MNITAWNAML 698
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 200/422 (47%), Gaps = 61/422 (14%)
Query: 28 CGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTF 87
C + +++ RN FD +V+WN M+ GY++ ++L L + MH+ + ++ T
Sbjct: 474 CMKEAEVLFGRNNFD------LVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTL 527
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
+T+L C L ++ GKQ+H +KSGY+ +V SG+L Y C ++ A+ FD +
Sbjct: 528 ATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI-- 585
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
P D V WT LISG ++ + E+AL +F
Sbjct: 586 -----------------------------PVPDDVAWTTLISGCIENGEE-ERALHVFSQ 615
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
MR G +P+E+T ++ +A + L A +G+ +H +K D +G +L++ Y C
Sbjct: 616 MRLMGV-LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCG 674
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK 323
+ D A ++ R+E + A N+++ GL G ++A +F ++ + + +++ ++
Sbjct: 675 SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLS 734
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
+ G V ++ + M HR + PE+E ++ + + L ++A
Sbjct: 735 ACSHSGLVSEAYKYIRSM-HRD-------YGIKPEIEH----YSCLADALGRAGLVKEAE 782
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDM 442
L +M +++ + S + L AC G + G+ + L++ P +S+ YV L +M
Sbjct: 783 NLIDSM---SMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYV--LLSNM 837
Query: 443 YS 444
Y+
Sbjct: 838 YA 839
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 190/445 (42%), Gaps = 66/445 (14%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG----CEKALKLFRWMRESGENM 215
Y +C ++ A VF KMP++D+V W +++ YA+S +G ++A LFR +R+
Sbjct: 91 YSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQD-VVY 149
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+ T +++ C G C + HG K G + D+ + GAL+ Y
Sbjct: 150 TSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIY------------ 197
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG----QV 331
+ G++++ ++F + + + +N M+K Y G +
Sbjct: 198 -------------------LKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 238
Query: 332 DDSKRLFEKMPHRSIISLNTMISV---------IPEMERNP--------VTWNSMISGYV 374
D S H + I+L + + + E ++ N ++SGY+
Sbjct: 239 DLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYL 298
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
+ L+ +M M + ++ + TF ++ L SL GQ +H +K + +
Sbjct: 299 HAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLT 358
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
V SL++MY + I A+ F+++S ++ +W +++ G + L EAV LF +L
Sbjct: 359 VSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCG 418
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV----VPTLEHYTCVVDLLGRSGHL 550
+ P+ T VL A A + EG+ + + + + + V T ++D R+ +
Sbjct: 419 LKPDHYTMTSVLKA---ASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCM 475
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
EAE D V W A++S
Sbjct: 476 KEAEVLFGRN--NFDLVAWNAMMSG 498
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 213/684 (31%), Positives = 338/684 (49%), Gaps = 66/684 (9%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSK---WAKFDESLSLV 72
I TN + + L A LFD + + VSWN+++ +S+ + ++SL
Sbjct: 46 IYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLF 105
Query: 73 STMHRSN-VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M R+N V N T + + S + L+ ++ GKQ H + +K+G +VGS LL Y
Sbjct: 106 RRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCK 165
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+ +A+++FD +MP+++ V W +ISGY
Sbjct: 166 TGFVFDARKLFD-------------------------------RMPERNTVSWATMISGY 194
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
A S D +KA+++F MR E + NE+ SV+ A G+ VH L IK G
Sbjct: 195 ASS-DIADKAVEVFELMRRE-EEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLA 252
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
S+ AL+ Y C + D A+R ++ + ++++ G G + A +FN++
Sbjct: 253 IVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMH 312
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFE-KMPHRSIISLN-----TMISVIPEM------ 359
+ + + G V D + E K H L ++S + +M
Sbjct: 313 SSGVLPSEFTLVG--VINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGS 370
Query: 360 ------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
+ + V W S+I+GYVQN +E L LY M+ + T + + A
Sbjct: 371 LADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRA 430
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CS L +L QG+ +HA ++K F+ V +G++L MY++CGS++D F + S +V +W
Sbjct: 431 CSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISW 490
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
A+++G S +G G++A+ LFE ML + I P+ TFV +LSAC GLV+ G + F+ M
Sbjct: 491 NAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFD 550
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+ + P +EHY C+VD+L R+G L+EA+EFI+ ++ +W LL AC N E+G
Sbjct: 551 EFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGV 610
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
A +K+ L SAYV+LS+IY LG +R+ + V K+PGCSWIEL V
Sbjct: 611 YAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLV 670
Query: 647 HAFSVEDRNNPNCNVIYATLEHLT 670
H F V D +P + I LE LT
Sbjct: 671 HVFVVGDNQHPQVDEIRLELELLT 694
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/516 (22%), Positives = 212/516 (41%), Gaps = 113/516 (21%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
++ N +T + G L A F+ + ++W+ M+ GY++ D++L L + M
Sbjct: 252 AIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKM 311
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
H S V +E T +++ C+ L ++++GKQ+H K G+ +V S ++ YA C +
Sbjct: 312 HSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSL 371
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
+A++ F+ + + + +LW+ ++ GYVQ +++ KM + V+
Sbjct: 372 ADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVI------------- 418
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
PNE T SV+RAC+ L A +GK +H +IK GF+ + I
Sbjct: 419 --------------------PNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPI 458
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
G AL Y C + D D LIF R+ +
Sbjct: 459 GSALSAMYTKCGSLD-------------------------------DGYLIFWRMPSRDV 487
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
IS+N+MI G + G + + LFEKM ++ ++ +PVT+ +++S
Sbjct: 488 ISWNAMISGLSQNGHGNKALELFEKM-------------LLEGIKPDPVTFVNLLSACSH 534
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
L ++ + + K+ D V +AC
Sbjct: 535 MGLVDRGWEYF----KMMFDEFNIAPMVEHYAC--------------------------- 563
Query: 436 GTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+VD+ SR G +N+A+ S + + W L+ +H V E ++E
Sbjct: 564 ---MVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELG 620
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
P ++ +V + S G ++ R MK+ GV
Sbjct: 621 -SPESSAYVLLSSIYTALGDRENVERVRRIMKARGV 655
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
M++ K+ + R L C+ ++ +G+ LHA ++KT S++YV + +++Y++
Sbjct: 1 MSLPKIFPPQHRQLLQDLIE-CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKT 59
Query: 447 GSINDAQASFSSI--SSPNVAAWTALMNGYSHHGLGSE---AVLLFEIMLE-QDIVPNAA 500
++ A F SI + + +W +L+N +S + S A+ LF M+ +++PNA
Sbjct: 60 NHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAH 119
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
T GV SA V G + G + + ++++ ++G + +A + M
Sbjct: 120 TLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRM 179
Query: 561 PIELDAVVWGALLSACWFWMNMEVGERAAQ 590
P E + V W ++S + + ++ ++A +
Sbjct: 180 P-ERNTVSWATMISG---YASSDIADKAVE 205
>gi|242092520|ref|XP_002436750.1| hypothetical protein SORBIDRAFT_10g008110 [Sorghum bicolor]
gi|241914973|gb|EER88117.1| hypothetical protein SORBIDRAFT_10g008110 [Sorghum bicolor]
Length = 672
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 197/678 (29%), Positives = 335/678 (49%), Gaps = 73/678 (10%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
++L+ N+++ R G+ AR LFD +P R+VV+WN+ L S+ + S
Sbjct: 33 DSLVRQHNRSLMGLLRRGRFSAARRLFDALPARSVVTWNSFLAALSRRRDVRAARSFFDA 92
Query: 75 MHRSNVKLNETTFSTILSVCA---QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M ++ +++T+L+ A Q + L +++ + + + S LL Y
Sbjct: 93 MPMRDI----ISWNTLLAAYARSLQPDHLAAARRLFDEMPQRDAVSW----STLLGAYTR 144
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+EEA+R+FDE+ N W+ M+ G+ M A +VF MP KD + ++SG+
Sbjct: 145 RGLMEEAQRLFDEMPHRNPASWNTMVTGFFAIGQMRKALNVFEAMPVKDSASLSAMVSGF 204
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEY----------TFDSVIRACARLGAFCEGKVVH 241
++ W+ E+ E + F+++I A + G + + +
Sbjct: 205 IRNG-----------WLHEADELLTKRLRAMDMDKAVDAFNTLIAAYGQTGRVTDARRLF 253
Query: 242 GLLIKCG----------FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
++ K FE + +++ Y A ++D + L N++I
Sbjct: 254 SMIPKTQSQHKGHKRRVFERNVVSWNSMMMCYIRTGDVCSARALFDEMPFKDLVTWNTMI 313
Query: 292 NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
G +E+AE +F + +++++N MI+G+ G V+ ++ F++MP +S I
Sbjct: 314 AGYTQASDMEEAEKLFGEVPAPDAVTWNLMIRGFTQKGDVEHARGFFDRMPEQSTI---- 369
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
TWN+MISGY QN ++ ++L+ M V+ AC+ L
Sbjct: 370 -------------TWNTMISGYEQNEDYDCTIKLFQRM-----------LEVVLAACASL 405
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTAL 470
L+ G LH L++ F + +L+ MYSRCG + A+A FS + + ++ +W AL
Sbjct: 406 AMLRLGAQLH-QLIEKSFLPDTATNNALMTMYSRCGELTSAKAIFSQMHTQKDLVSWNAL 464
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYG 529
+ GY HHG +EA+ LF+ M ++P TF+ +LSAC AGLV+EG +F +M YG
Sbjct: 465 IGGYEHHGNATEALRLFQEMRSAKVMPTHITFISLLSACGNAGLVSEGQVVFHTMVHEYG 524
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ P +EHY +V+L+GR G L +A E IK MPI D VWGA L AC N + AA
Sbjct: 525 LAPRVEHYAALVNLIGRHGQLEDALEVIKSMPIAPDRAVWGAFLGACTAKKNEVLAAVAA 584
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+ +D + + YV++ N++A G+WG +R+ + L + K PG SWI+L+ +VH F
Sbjct: 585 NALSKIDPESSAPYVLMHNLHAHEGRWGSASVVREDMERLGIHKHPGYSWIDLHDKVHVF 644
Query: 650 SVEDRNNPNCNVIYATLE 667
D ++P I++ LE
Sbjct: 645 ISGDTSHPLTQEIFSVLE 662
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 300/552 (54%), Gaps = 26/552 (4%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM-PKKDVVVWTKLISGYA 192
+ +A+R+FD + + + W+ ++ Y ++ DA +F + +++VV WT L+SGYA
Sbjct: 50 RVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDRPDARRNVVTWTALLSGYA 109
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
++ ++A LF M E N+ + T + R+G C + +G+ ++ D
Sbjct: 110 RA-GRVDEAEALFGRMPE--RNVVSWNTMLEAYTSSGRVGDAC--TLFNGMPVR-----D 159
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
L+ D A +++DR+ + A +++ G+ G + +A +F+ + E
Sbjct: 160 AGSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPE 219
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEM 359
N +S+N+MI GYA +D++ LF KMP R I S N MI+ + +M
Sbjct: 220 RNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERAQELFDKM 279
Query: 360 -ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
RN VTW +M++GY+Q+ E ALQL+ M I + TF ACS L L +GQ
Sbjct: 280 PRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQ 339
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H + KTPF+ + ++ ++L+++Y++CG I A+ F+ +V +W ++ Y+HHG
Sbjct: 340 QVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHG 399
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHY 537
+G EA+ L+E M E PN T+VG+LSAC +GLV+EG++IF M K + EHY
Sbjct: 400 VGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHY 459
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
TC++DL R+G L +A+ I + +E + VW ALL C N +G+ AA+ + +
Sbjct: 460 TCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEP 519
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
Y +L NIYA GKW + IR + +KK PGCSWIE+ ++VH F D+++
Sbjct: 520 NNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVANKVHVFVSRDKSHS 579
Query: 658 NCNVIYATLEHL 669
++I + L+ +
Sbjct: 580 ESDLINSLLQDI 591
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 131/506 (25%), Positives = 207/506 (40%), Gaps = 129/506 (25%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R+G + AR LFD+MP R V++W TM+ G ++ +E+ +L M NV
Sbjct: 172 RSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNV--------- 222
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
N++I G YA I+EA +F ++ +
Sbjct: 223 -----VSWNAMISG-------------------------YARNHMIDEAHDLFMKMPTRD 252
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
W++M+ G++Q + A ++F KMP+++VV WT +++GY +S+ E AL+LF M
Sbjct: 253 IASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQ-SETALQLFNGML 311
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G PN+ TF + AC+ L EG+ VH ++ K F+FD I L+ Y C
Sbjct: 312 IDGIR-PNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKC--- 367
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
G I A +FN E + IS+N MI YA +G
Sbjct: 368 ----------------------------GEIILARKVFNLSKEKDVISWNGMIAAYAHHG 399
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
++ L+EKM +GY N++
Sbjct: 400 VGLEAIHLYEKMQE---------------------------NGYKPNDV----------- 421
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG----TSLVDMYSR 445
T+ L ACS G + +G + ++VK + ++ V T L+D+ SR
Sbjct: 422 ----------TYVGLLSACSHSGLVDEGLRIFEYMVK---DRSIAVRDEHYTCLIDLCSR 468
Query: 446 CGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
G + DA+ + P+ W AL+ G + HG S L +LE + NA T+
Sbjct: 469 AGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAE-PNNAGTYTL 527
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGV 530
+ + AG E KI M G+
Sbjct: 528 LCNIYASAGKWKEAAKIRSEMNDRGL 553
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 18/256 (7%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I S N IT +N L A+ LFD+MP R VV+W TM+ GY + + + +L L + M
Sbjct: 253 IASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLI 312
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ N+ TF + C+ L L +G+Q+H ++ K+ ++ F+ S L+ YA C EI
Sbjct: 313 DGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIIL 372
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAK 193
A++VF+ E + + W+ M+ Y + +A ++ KM K + V + L+S +
Sbjct: 373 ARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSH 432
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK-------------VV 240
S ++ L++F +M + + + +I C+R G + K V
Sbjct: 433 S-GLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVW 491
Query: 241 HGLLIKCGFEFDESIG 256
+ LL C +ESIG
Sbjct: 492 NALLGGCNSHGNESIG 507
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 144/315 (45%), Gaps = 44/315 (13%)
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
FY A D V + +++P N + L + GR+ DA +F+R + + +S+ ++
Sbjct: 22 FYDSAAAVD----VSNHVQDP-----NRRVAELAAAGRVSDARRLFDRTPDRDVVSWTAL 72
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK 381
+ YA G + D++ LF++ P+ RN VTW +++SGY + ++
Sbjct: 73 VAAYACQGMLHDARALFDR----------------PDARRNVVTWTALLSGYARAGRVDE 116
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLV 440
A L+ M +R +++ + A + G + L + V+ N+ L+
Sbjct: 117 AEALFGRM----PERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNI-----LL 167
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
R G+I+ A+ F + NV AWT ++ G + G +EA LF+ M E+++V
Sbjct: 168 AALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNVV---- 223
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
++ ++S R +++E +F M + + + ++ ++ +L A+E M
Sbjct: 224 SWNAMISGYARNHMIDEAHDLFMKMPTRDIAS----WNIMITGFIQNKNLERAQELFDKM 279
Query: 561 PIELDAVVWGALLSA 575
P + V W +++
Sbjct: 280 P-RRNVVTWTTMMNG 293
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/458 (36%), Positives = 262/458 (57%), Gaps = 54/458 (11%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+E T SV+ ACA L A EG+ VH ++K
Sbjct: 8 PDEVTLSSVMSACAGLAAEREGRQVHAHMVK----------------------------- 38
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
DRL + + +N+L++ GR +A IF+ + + +S S++ GYA V+D++
Sbjct: 39 RDRLRDDMV-LNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQ 97
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
+F +M +E+N + WN +I+ Y QN E+A++L++ +++ +I
Sbjct: 98 VVFSQM-----------------VEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIW 140
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF------ESNVYVGTSLVDMYSRCGSI 449
T T+ + +AC + LQ GQ H H++K F ES+V+VG SLVDMY + GSI
Sbjct: 141 PTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSI 200
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+D F +++ + +W A++ GY+ +G +A+ LFE ML + P++ T +GVLSAC
Sbjct: 201 DDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSAC 260
Query: 510 VRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
+GLV+EG + F M + +G+ P+ +HYTC+VDLLGR+GHL EAEE IKDMP E D+V+
Sbjct: 261 GHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVL 320
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W +LL AC N+E+GER A ++F LD + YV+LSN+YA +GKW +R+ +
Sbjct: 321 WASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKD 380
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
V K PGCSWIE+ S+++ F D +P N I++TL
Sbjct: 381 RGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTL 418
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 133/260 (51%), Gaps = 28/260 (10%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV-GSGLLFFYANCFEIEEAKRV 141
+E T S+++S CA L + +G+Q+H ++K + V + L+ YA C EA+ +
Sbjct: 9 DEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCI 68
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD + + + + +L GY + + DA VF +M +K+V+ W LI+ YA++ + E+A
Sbjct: 69 FDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEE-EEA 127
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
++LF ++ P YT+ +V+ AC + G+ H ++K GF FD
Sbjct: 128 IRLFVQLKRD-SIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFD--------- 177
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
F + F G NSL++ + G I+D +F R+ +++S+N+M
Sbjct: 178 FGPESDVFVG----------------NSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAM 221
Query: 322 IKGYAVYGQVDDSKRLFEKM 341
I GYA G+ D+ LFE+M
Sbjct: 222 IVGYAQNGRAKDALHLFERM 241
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 15/233 (6%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS + ++ + A+ +F QM + V++WN ++ Y++ + +E++ L + R
Sbjct: 77 VVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKR 136
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY------ECFEFVGSGLLFFYAN 131
++ T+ +L+ C + L G+Q H VLK G+ E FVG+ L+ Y
Sbjct: 137 DSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLK 196
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKL 187
I++ +VF+ + + + W+ M+VGY Q DA +F +M D V +
Sbjct: 197 TGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGV 256
Query: 188 IS--GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+S G++ VD + + F +M E P+ + ++ R G E +
Sbjct: 257 LSACGHSGLVD---EGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAE 306
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 199/710 (28%), Positives = 336/710 (47%), Gaps = 136/710 (19%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
MP R VSWNT++ ++ E+L + M + + T +++LS C + +L DG
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
++ H L +K G + +FV +GLL Y C +
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSV---------------------------- 92
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+DA +F MP + V +T ++ G A+ + AL+LF M +G + + S
Sbjct: 93 ---ADAVRLFDGMPSPNEVSFTAMMGGLAQG-GAVDDALRLFARMSRTGIRV-DPVAVSS 147
Query: 224 VIRACARLGAFCEG-----------KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
V+ ACA+ C G + +H L+++ GF D+ +G +L++ Y D A
Sbjct: 148 VLGACAQA---CAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEA 204
Query: 273 MRVYDRLENPCLNASNSLINGLISMG---------------------------------- 298
++V++ L + + + N LI G +G
Sbjct: 205 IKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKA 264
Query: 299 -RIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM------PHRSIISL-- 349
+ A +F+++ + + ++N+++ GY ++ LF +M P R+ +++
Sbjct: 265 RDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVIL 324
Query: 350 -------------------------------NTMISVIPE--------------MERNPV 364
+ +I + + ER+ V
Sbjct: 325 SSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVV 384
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
WNSMISG ++L E+A MR+ + T S+++ + + C+ L S+ QG+ +HA +
Sbjct: 385 CWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQV 444
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
+K ++ NVYVG SL+DMY++ G+++DA+ F+ + N+ AW +++GY+ +G G +AV
Sbjct: 445 LKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAV 504
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDL 543
LFE ML P++ TF+ VL+ C +GLV+E + F SM+S YG+ P +EHYTC++D
Sbjct: 505 ELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDA 564
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
L R+ E E I MP + D ++W LL+AC N E+GE +A+ +F LD K S Y
Sbjct: 565 LARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPY 624
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
V+LSNIYA LG+ G +R ++ V K G SW+ AF V D
Sbjct: 625 VLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGSRAFMVAD 674
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 212/491 (43%), Gaps = 93/491 (18%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V+ + + C + + +AR +FD++P +V +WNT+L GY + E++ L M
Sbjct: 252 VTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQ 311
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
NV+ + TT + ILS C++L + GKQ+H ++ FV SGL+ Y+ C ++ A
Sbjct: 312 NVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIA 371
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+F+ + E + + W+ M+ G +L +AFD
Sbjct: 372 LIIFNMMTERDVVCWNSMISGLAIHSLSEEAFD--------------------------- 404
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+ MRE+G P E ++ S+I CARL + +G+ +H ++K G +D+++
Sbjct: 405 -----FLKQMRENGM-FPTESSYASMINLCARLSSIPQGRQMHAQVLKDG--YDQNV--- 453
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
Y GC SLI+ G ++DA L FN + N +++
Sbjct: 454 ----YVGC----------------------SLIDMYAKSGNMDDARLFFNCMIVKNLVAW 487
Query: 319 NSMIKGYAVYGQVDDSKRLFEKM------PHR-SIISLNTMISVIPEMERNPVTWNSMIS 371
N MI GYA G + + LFE M P + I++ T S ++ +NSM S
Sbjct: 488 NEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMES 547
Query: 372 GYVQNNLHE-------------KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
Y L E + ++ + K+ + VL AC + + G+
Sbjct: 548 NYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGE 607
Query: 419 LLHAHLVK-TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS-- 475
HL + P + YV L ++Y+ G DA A + +SS V GYS
Sbjct: 608 FSAKHLFRLDPKNPSPYV--LLSNIYATLGRHGDASAVRALMSSRGVVKG----RGYSWV 661
Query: 476 HHGLGSEAVLL 486
+H GS A ++
Sbjct: 662 NHKDGSRAFMV 672
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 203/663 (30%), Positives = 332/663 (50%), Gaps = 93/663 (14%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHC 108
V+ WN L + + + E++ M S V + TF +L+V A LN L GKQIH
Sbjct: 900 VIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHG 959
Query: 109 LVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD 168
+V++SG + VG NC ++ YV+ +S
Sbjct: 960 IVMRSGLDQVVSVG--------NC-----------------------LINMYVKAGSVSR 988
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKS-VDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
A VF +M + D++ W +ISG S ++ C + +R+S +P+++T SV+RA
Sbjct: 989 ARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGM-FVHLLRDS--LLPDQFTVASVLRA 1045
Query: 228 CARL-GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
C+ L G + +H +K G D + ALI+ Y + A ++ + L +
Sbjct: 1046 CSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLAS 1105
Query: 287 SNSLINGLISMGRIEDAELIF----------NRLTEANSISYNSMIKG------------ 324
N++++G I G A ++ +++T N+ + G
Sbjct: 1106 WNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVV 1165
Query: 325 -----------------YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
Y G+++ ++R+F ++P + V W
Sbjct: 1166 KRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP-----------------SPDDVAWT 1208
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+MISG V+N E AL Y MR + TF+ L ACS L +L+QG+ +HA++VK
Sbjct: 1209 TMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKL 1268
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ +V TSLVDMY++CG+I DA+ F ++ +A+W A++ G + HG EA+ F
Sbjct: 1269 NCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFF 1328
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
+ M + ++P+ TF+GVLSAC +GLV+E + F SM K+YG+ P +EHY+C+VD L R
Sbjct: 1329 KYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSR 1388
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G + EAE+ I MP E A ++ LL+AC ++ E G+R A+K+ L+ +AYV+L
Sbjct: 1389 AGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLL 1448
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SN+YA +W R + + VKKDPG SW++L ++VH F DR++ +VIY +
Sbjct: 1449 SNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKV 1508
Query: 667 EHL 669
E++
Sbjct: 1509 EYI 1511
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 148/605 (24%), Positives = 263/605 (43%), Gaps = 67/605 (11%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWA-KFDESLSLVSTMHR 77
TN IT + G L +AR LFD P R +V+WN +L + A K + L + R
Sbjct: 694 TNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRR 753
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S V T + + +C S + +H +K G + FV L+ YA I E
Sbjct: 754 SVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIRE 813
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK-----KDVVVWT------- 185
A+ +FD + + +LW++M+ YV L +A +F + + DV + T
Sbjct: 814 ARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKC 873
Query: 186 -------KLISGYAKSV-----DGCE-----KALKLFRWMRESGE------NMPNE---- 218
K YA + DG + KAL F E+ E +M N
Sbjct: 874 KKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVAC 933
Query: 219 --YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
TF ++ A L GK +HG++++ G + S+G LI Y + A V+
Sbjct: 934 DGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVF 993
Query: 277 DRLENPCLNASNSLINGLISMGRIE----------DAELIFNRLTEANSI-SYNSMIKGY 325
++ L + N++I+G G E L+ ++ T A+ + + +S+ GY
Sbjct: 994 GQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGY 1053
Query: 326 AVYGQVD----DSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTWNSMISGY 373
+ Q+ + + + ++I + + + E E + +WN+++ GY
Sbjct: 1054 YLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGY 1113
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
+ + KAL+LY+ M++ + T A L L+QG+ +HA +VK F ++
Sbjct: 1114 IVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDL 1173
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+V + ++DMY +CG + A+ FS I SP+ AWT +++G +G A+ + M
Sbjct: 1174 FVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLS 1233
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
+ P+ TF ++ AC + +G +I ++ T +VD+ + G++ +A
Sbjct: 1234 KVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDA 1293
Query: 554 EEFIK 558
K
Sbjct: 1294 RGLFK 1298
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 179/414 (43%), Gaps = 83/414 (20%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G++ A LF + SWN ++ GY F ++L L M S + ++ T
Sbjct: 1084 KRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVN 1143
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
L L GKQIH +V+K G+ FV SG+L Y C E+E A+RVF E+ +
Sbjct: 1144 AAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPD 1203
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWM 208
++ W+ M+ G V+ +G E+ AL + M
Sbjct: 1204 DVAWTTMISGCVE---------------------------------NGQEEHALFTYHQM 1230
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
R S + P+EYTF ++++AC+ L A +G+ +H ++K FD + +L++ Y C
Sbjct: 1231 RLS-KVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKC-- 1287
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
G IEDA +F R S+N+MI G A +
Sbjct: 1288 -----------------------------GNIEDARGLFKRTNTRRIASWNAMIVGLAQH 1318
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G ++ + F+ M R V+P+ VT+ ++S + L +A + + +
Sbjct: 1319 GNAKEALQFFKYMKSR---------GVMPDR----VTFIGVLSACSHSGLVSEAYENFYS 1365
Query: 389 MRK-LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
M+K I+ +S L A S G +++ + + + PFE++ + +L++
Sbjct: 1366 MQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKV---ISSMPFEASASMYRTLLN 1416
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 124/575 (21%), Positives = 235/575 (40%), Gaps = 103/575 (17%)
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+IL + L GK+ H +L SG+ FV + L+ YA C + A+++FD +
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N +D+V W ++S A D LFR +
Sbjct: 721 N-----------------------------RDLVTWNAILSALAAHADKSHDGFHLFRLL 751
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
R S + +T V + C + + +HG +K G ++D + GAL+ Y
Sbjct: 752 RRSVVST-TRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYA---- 806
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
G I +A ++F+ + + + +N M+K Y
Sbjct: 807 ---------------------------KFGLIREARVLFDGMAVRDVVLWNVMMKAYVDT 839
Query: 329 GQVDDSKRLFEKMPHRS-----IISLNTMISVIP------EMER---------------- 361
++ LF + HR+ ++L T+ V+ E+++
Sbjct: 840 CLEYEAMLLFSEF-HRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGS 898
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ + WN +S ++Q +A+ ++ M + TF V+ + L L+ G+ +H
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
++++ + V VG L++MY + GS++ A++ F ++ ++ +W +++G + GL
Sbjct: 959 GIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEE 1018
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVR-AGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
+V +F +L ++P+ T VL AC G +I GVV T +
Sbjct: 1019 CSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTAL 1078
Query: 541 VDLLGRSGHLHEAE-EFIKDMPIEL---DAVVWGALLSACW------FWMNMEVGERAAQ 590
+D+ + G + EAE F+ +L +A++ G ++S + + + E GER+ Q
Sbjct: 1079 IDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQ 1138
Query: 591 KMFGLDKKPISAYVIL---SNIYAVLGKWGKKMDI 622
K V L I+AV+ K G +D+
Sbjct: 1139 ITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDL 1173
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 64/311 (20%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ +AR +F ++P V+W TM+ G + + + +L M S V+ +E TF+T++
Sbjct: 1187 GEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLV 1246
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ L +L G+QIH ++K FV + L+ YA C IE+A+ +F +
Sbjct: 1247 KACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIA 1306
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+VG Q G AK +AL+ F++M+
Sbjct: 1307 SWNAMIVGLAQ--------------------------HGNAK------EALQFFKYMKSR 1334
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G MP+ TF V+ AC+ H L+ +E FY
Sbjct: 1335 GV-MPDRVTFIGVLSACS-----------HSGLVSEAYE----------NFY-------- 1364
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-EANSISYNSMIKGYAVYGQ 330
+M+ +E P + + L++ L GRIE+AE + + + EA++ Y +++ V
Sbjct: 1365 SMQKNYGIE-PEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVD 1423
Query: 331 VDDSKRLFEKM 341
+ KR+ EK+
Sbjct: 1424 RETGKRVAEKL 1434
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 13/196 (6%)
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
+T R I FS+L A + L G+ HA ++ + + +V +L+ MY++C
Sbjct: 646 LTPRAHLIHSLPQCFSILRQAIAA-SDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKC 704
Query: 447 GSINDAQASFSSISSPN--VAAWTALMNGYSHHGLGS-EAVLLFEIMLEQDIVPNAATFV 503
GS++ A+ F + N + W A+++ + H S + LF ++ + T
Sbjct: 705 GSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLA 764
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKD 559
V C L++ S+ Y V L+ V V++ + G + EA
Sbjct: 765 PVFKMC----LLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDG 820
Query: 560 MPIELDAVVWGALLSA 575
M + D V+W ++ A
Sbjct: 821 MAVR-DVVLWNVMMKA 835
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 199/662 (30%), Positives = 323/662 (48%), Gaps = 87/662 (13%)
Query: 18 IVSTNKAITECGR--NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
IVS NK + C NG L A +F + ++ +N ++ ++K + +L L S +
Sbjct: 69 IVSLNKLMAFCTDPFNGNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKL 128
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ + T+ + L + +++ LV K+G E +V + L+ YA
Sbjct: 129 REDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALT 188
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
+ K +FDE MP +DV+ W +ISGY K
Sbjct: 189 DVMKMLFDE-------------------------------MPDRDVISWNVMISGYVK-C 216
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
E A+ +F M+E MP+E T S + AC L GK +H ++ +F I
Sbjct: 217 RRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHY-VRDNVKFTPII 275
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
G AL++ YC C G +S+ R +F + N
Sbjct: 276 GNALLDMYCKC--------------------------GCLSIARA-----VFEEMPSKNV 304
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
I + +M+ GYA G++++++ LFE P R + V W +MI+GYVQ
Sbjct: 305 ICWTTMVSGYANCGELEEARELFEGSPIRDV-----------------VIWTAMINGYVQ 347
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N ++A+ L+ M+ + + L C+ G+++QG+ +H + + + V
Sbjct: 348 FNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVV 407
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
GT+L++MY++CG I A F + + A+WT+++ G + +G S+A+ LF M + +
Sbjct: 408 GTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGV 467
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
P+ TF+GVLSAC GLV EG K F SM+ Y + P +EHY C+VDLLGR+G L+EAE
Sbjct: 468 RPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAE 527
Query: 555 EFIKDMPIELDAV---VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
E IK +P E A+ ++G+LLSAC + N+E+GER A+++ + S + +L+NIYA
Sbjct: 528 ELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYA 587
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
+W +R+++ L VKK PGCS IE++S +H F ++P IY L +
Sbjct: 588 FADRWEDVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPSHPEMREIYYMLNIMAK 647
Query: 672 NL 673
L
Sbjct: 648 PL 649
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 164/374 (43%), Gaps = 37/374 (9%)
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE----------- 358
L++ + ISY K Q+ ++F H+ I+SLN +++ +
Sbjct: 35 LSQQSCISYLKSCKSMTHLKQI--HAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEK 92
Query: 359 ---MERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
R P + +N +I + + +++ L L+ +R+ + T+ +F A LG
Sbjct: 93 MFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGE 152
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
+ + + L + KT E + YV SL+DMY++ + + F + +V +W +++G
Sbjct: 153 VSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISG 212
Query: 474 YSHHGLGSEAVLLFEIMLEQD-IVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVV 531
Y +A+ +F M E+ ++P+ AT V LSAC + G KI ++ +
Sbjct: 213 YVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVRDNVKFT 272
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P + + ++D+ + G L A ++MP + + + W ++S + N E A +
Sbjct: 273 PIIGN--ALLDMYCKCGCLSIARAVFEEMPSK-NVICWTTMVSG---YANCGELEEAREL 326
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP--------GCSW---I 640
G + + + + N Y ++ + + + + + +VK D GC+ I
Sbjct: 327 FEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAI 386
Query: 641 ELNSRVHAFSVEDR 654
E +H F E+R
Sbjct: 387 EQGKWIHEFIDENR 400
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/666 (28%), Positives = 332/666 (49%), Gaps = 58/666 (8%)
Query: 32 GQLVTARNLFDQMPIR-TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
G + +AR +FD M + V WN ++ GY+K +F+ESLSL MH + +E S +
Sbjct: 364 GDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCL 423
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L L+ DG H ++K G+ V + L+ FYA
Sbjct: 424 LKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYA-------------------- 463
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ N++ DA VF +MP++D + W +ISG + + E A++LF M
Sbjct: 464 -----------KSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSE-AIELFIRMWT 511
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G+ + + T SV+ ACA+ + G+VVHG +K G + S+ AL++ Y C +
Sbjct: 512 QGQEL-DSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQ 570
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYA 326
+++ + + + ++I + G + + + + + S + +A
Sbjct: 571 STNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFA 630
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNS 368
+ K + + L + + + EM ++ ++WN+
Sbjct: 631 GDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNT 690
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
+I GY +NN ++ L+ M L T + + A + + SL++G+ +HA+ ++
Sbjct: 691 LIGGYSRNNFPNESFSLFSDML-LQFRPNAVTMTCILPAAASISSLERGREIHAYALRRG 749
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
F + Y +LVDMY +CG++ A+ F ++ N+ +WT ++ GY HG G A+ LFE
Sbjct: 750 FLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFE 809
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
M I P+AA+F +L AC +GL EG + F++M K Y + P L+HYTC+VDLL R+
Sbjct: 810 QMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRT 869
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L EA EFI+ MPIE D+ +W +LL C N+++ E+ A K+F L+ + YV+L+
Sbjct: 870 GDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLA 929
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NIYA +W ++ ++ ++++ G SWIE+ S+VH F ++RN+P+ N I L+
Sbjct: 930 NIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLD 989
Query: 668 HLTANL 673
+ +
Sbjct: 990 DVARRM 995
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 147/557 (26%), Positives = 255/557 (45%), Gaps = 55/557 (9%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N I R G++ A +FD M R +SWN+M+ G ++ L S M
Sbjct: 242 ANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGT 301
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYE-CFEFVGSGLLFFYANCFEIEEAK 139
+++ T ++L CA L + GK +H +KSG + V SG+
Sbjct: 302 EISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGI-------------- 347
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK-DVVVWTKLISGYAKSVDGC 198
D+ L S ++ YV+C M+ A VF M K +V VW ++ GYAK V
Sbjct: 348 --------DDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAK-VGEF 398
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
E++L LF M E G P+E+ +++ L +G V HG ++K GF ++ A
Sbjct: 399 EESLSLFVQMHELG-IAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNA 457
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEAN 314
LI FY A+ V++R+ + NS+I+G S G +A +F R+ E +
Sbjct: 458 LISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELD 517
Query: 315 SISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------VIP 357
S++ S++ G V+G + + E +++ + + S +
Sbjct: 518 SVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFR 577
Query: 358 EM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR-STFSVL--FHACSCLGS 413
M ++N V+W +MI+ Y++ L +K L ++++ +D R F+V HA + S
Sbjct: 578 SMGQKNVVSWTAMITSYMRAGLFDKVAGL---LQEMVLDGIRPDVFAVTSALHAFAGDES 634
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L+QG+ +H + ++ E + V +L++MY +C ++ +A+ F +++ +V +W L+ G
Sbjct: 635 LKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGG 694
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT 533
YS + +E+ LF ML Q PNA T +L A + G +I G +
Sbjct: 695 YSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLED 753
Query: 534 LEHYTCVVDLLGRSGHL 550
+VD+ + G L
Sbjct: 754 SYASNALVDMYVKCGAL 770
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 147/600 (24%), Positives = 242/600 (40%), Gaps = 111/600 (18%)
Query: 32 GQLVTARNLFDQMPIRT--VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
G L AR +FD MP + V W +++ Y+K F E++SL M V + S
Sbjct: 150 GDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSC 209
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L + L SL +G+ IH L+ K G V + L+ Y+ C +E+A RVFD +H +
Sbjct: 210 VLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRD 269
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ G A D+F KM W++ G E
Sbjct: 270 AISWNSMIGGCFSNGWHGTAVDLFSKM-------WSQ----------GTE---------- 302
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF----------DESIGGAL 259
+ T SV+ ACA LG GK VHG +K G + D ++G L
Sbjct: 303 ------ISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKL 356
Query: 260 IEFYCGCEAFDGAMRVYDRLENPC-LNASNSLINGLISMGRIEDAELIFNRLTE------ 312
+ Y C A RV+D + + ++ N ++ G +G E++ +F ++ E
Sbjct: 357 VFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPD 416
Query: 313 ---------------------------------ANSISYNSMIKGYAVYGQVDDSKRLFE 339
A N++I YA + D+ +F
Sbjct: 417 EHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFN 476
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+MP + IS WNS+ISG N L+ +A++L++ M +
Sbjct: 477 RMPRQDTIS-----------------WNSVISGCSSNGLNSEAIELFIRMWTQGQELDSV 519
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T + AC+ G+++H + VKT + +L+DMYS C F S+
Sbjct: 520 TLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSM 579
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
NV +WTA++ Y GL + L + M+ I P+ V +++ + A +E +
Sbjct: 580 GQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPD----VFAVTSALHAFAGDESL 635
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLG----RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
K +S+ Y + +E V + L + ++ EA I D D + W L+
Sbjct: 636 KQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEA-RLIFDRVTNKDVISWNTLIGG 694
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 233/503 (46%), Gaps = 47/503 (9%)
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKK--DVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+L +++ Y++C + +A VF MP + DV VWT L+S YAK+ D ++A+ LFR M
Sbjct: 137 VLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGD-FQEAVSLFRQM 195
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ G + P+ + V++ + LG+ EG+V+HGLL K G ++ ALI Y C
Sbjct: 196 QCCGVS-PDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGR 254
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK- 323
+ A RV+D + + NS+I G S G A +F+++ TE +S++ S++
Sbjct: 255 MEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPA 314
Query: 324 ----GYAVYGQ---------------------VDD----SKRLFEKMPHRSIISLNTMIS 354
GY + G+ +DD SK +F + + S +
Sbjct: 315 CAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFD 374
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+ + N WN ++ GY + E++L L++ M +L I S L +CL
Sbjct: 375 AMSS-KGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCA 433
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ G + H ++VK F + V +L+ Y++ I DA F+ + + +W ++++G
Sbjct: 434 RDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGC 493
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
S +GL SEA+ LF M Q ++ T + VL AC ++ G + G++
Sbjct: 494 SSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGET 553
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA---QK 591
++D+ + + M + + V W A++++ +M + ++ A Q+
Sbjct: 554 SLANALLDMYSNCSDWQSTNQIFRSMG-QKNVVSWTAMITS---YMRAGLFDKVAGLLQE 609
Query: 592 MFGLDKKPISAYVILSNIYAVLG 614
M LD + + S ++A G
Sbjct: 610 MV-LDGIRPDVFAVTSALHAFAG 631
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/569 (33%), Positives = 297/569 (52%), Gaps = 53/569 (9%)
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
TT ILS + SL++ +Q H +LK+G F S L+ F A E K V
Sbjct: 7 TTPVPILSFTERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATN---PEPKTV--- 60
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
S A + ++ + +I YA S E AL +
Sbjct: 61 ----------------------SYAHSILNRIESPNGFTHNSVIRAYANS-STPEIALTV 97
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
FR M G P++Y+F V++ACA F EG+ +HGL +K D + LI Y
Sbjct: 98 FREML-LGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYG 156
Query: 265 GCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRLTEANSISYNSMI 322
F+ A +V DR+ P +A NSL++ + G +E+A +F+ + E N S+N MI
Sbjct: 157 RSGYFEIARKVLDRM--PVRDAVSWNSLLSAYLDKGLVEEARALFDEMEERNVESWNFMI 214
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
GYA G V +++ +F+ MP + ++S WN+M++ Y + +
Sbjct: 215 SGYAAAGLVKEAREVFDSMPVKDVVS-----------------WNAMVTAYAHVGCYNEV 257
Query: 383 LQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
L+++ M + +R T + AC+ LGSL QG+ +H ++ K E +V T+LVD
Sbjct: 258 LEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVD 317
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MYS+CG I+ A F S +V+ W +++ G S HGLG +A+ +F M+ + PN T
Sbjct: 318 MYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGIT 377
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
F+GVLSAC GL+++ K+F M S YG+ PT+EHY C+VDLLGR G EAEE + ++
Sbjct: 378 FIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEV 437
Query: 561 PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKM 620
P + +++ +LL AC + +E ER A ++ + + S YV +SN+YA G+W + M
Sbjct: 438 PADEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMSNLYASHGRWDEAM 497
Query: 621 DIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
++R ++ VKK+PGCS IE++ VH F
Sbjct: 498 EVRGKMRAERVKKNPGCSMIEVDGVVHEF 526
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 210/453 (46%), Gaps = 56/453 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A ++ +++ + N+++ Y+ + + +L++ M V ++ +F+ +L CA
Sbjct: 63 AHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAA 122
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC--FEI------------------- 135
+G+QIH L +KS FV + L+ Y FEI
Sbjct: 123 FCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSL 182
Query: 136 ----------EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
EEA+ +FDE+ E N W+ M+ GY L+ +A +VF MP KDVV W
Sbjct: 183 LSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWN 242
Query: 186 KLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
+++ YA GC + L++F M + P+ +T +V+ ACA LG+ +G+ VH +
Sbjct: 243 AMVTAYAHV--GCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYI 300
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
K G E + + AL++ Y C D A+ V+ ++ NS+I GL G +DA
Sbjct: 301 DKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDAL 360
Query: 305 LIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
IF+ + + N I++ ++ G +D +++LFE M N++ + P +E
Sbjct: 361 EIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMM--------NSVYGIEPTIE 412
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
+ M+ + E+A +L + ++ D L AC G L+Q + +
Sbjct: 413 H----YGCMVDLLGRMGKFEEAEEL---VNEVPADEASILLESLLGACKRFGKLEQAERI 465
Query: 421 HAHLVKT-PFESNVYVGTSLVDMYSRCGSINDA 452
L+++ P ES+ YV S ++Y+ G ++A
Sbjct: 466 ANRLLESNPRESSGYVQMS--NLYASHGRWDEA 496
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 147/342 (42%), Gaps = 55/342 (16%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+E + S N I+ G + AR +FD MP++ VVSWN M+ Y+ ++E L + +
Sbjct: 203 EERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFN 262
Query: 74 TM-HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M S + + T +LS CA L SL G+ +H + K G E FV + L+ Y+ C
Sbjct: 263 MMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKC 322
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
+I++A VF + + + W+ ++ G L DA ++F +M + G+
Sbjct: 323 GKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEM----------VYEGFK 372
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
PN TF V+ AC +G + + + FE
Sbjct: 373 -----------------------PNGITFIGVLSACNHVGLLDQARKL--------FEMM 401
Query: 253 ESIGG--ALIEFYCGCEAFDGAMRVYDRLEN-----PCLNAS---NSLINGLISMGRIED 302
S+ G IE Y G M ++ E P AS SL+ G++E
Sbjct: 402 NSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQ 461
Query: 303 AELIFNRLTEAN---SISYNSMIKGYAVYGQVDDSKRLFEKM 341
AE I NRL E+N S Y M YA +G+ D++ + KM
Sbjct: 462 AERIANRLLESNPRESSGYVQMSNLYASHGRWDEAMEVRGKM 503
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/617 (31%), Positives = 317/617 (51%), Gaps = 69/617 (11%)
Query: 79 NVKLNETTFSTILSV--CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
N+ ++ T+L + + SL Q+H LVL+SG+ +V LL YAN
Sbjct: 23 NIPTSKLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANP---- 78
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
H N A VF +P +V +W +I G
Sbjct: 79 ---------HFSN----------------FDFALKVFSSIPNPNVFIWNIVIKG------ 107
Query: 197 GCEKALKLFRWMRESG----ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
C + KLF+ + G + PN++T+ ++ +AC+ A EG+ +HG ++K G D
Sbjct: 108 -CLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSD 166
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
I A I Y + A +++ E+ + N++I+G + G +E A+ +F ++
Sbjct: 167 VHIKSAGIHMYASFGRLEDARKMFYSGESDVV-CWNTMIDGYLKCGVLEAAKGLFAQMPV 225
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
N S+N MI G A G + D+++LF++M ER+ ++W+SM+ G
Sbjct: 226 KNIGSWNVMINGLAKGGNLGDARKLFDEMS-----------------ERDEISWSSMVDG 268
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
Y+ +++AL+++ M++ R S + ACS +G++ QG+ +HA+L + + +
Sbjct: 269 YISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLD 328
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
+GT+L+DMY++CG ++ F + + W A++ G + HG +A+ LF + E
Sbjct: 329 AVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQE 388
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLH 551
+ PN T VGVL+AC AG V++G++IF++M+ YGV P LEHY C+VDLLGRSG
Sbjct: 389 GRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFS 448
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
EAE+ I MP++ +A VWGALL AC N ++ ER + + L+ + YV+LSNIYA
Sbjct: 449 EAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYA 508
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
+G++ IRK + +K PG S ++LN VH F + D ++P IY L+ +
Sbjct: 509 KVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKE 568
Query: 672 NLN--------SVVLFD 680
L S VLFD
Sbjct: 569 RLQMAGHSPDTSQVLFD 585
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 205/450 (45%), Gaps = 55/450 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +F +P V WN ++ G + K +++ M + + N+ T+ T+ C+
Sbjct: 86 ALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSV 144
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
++ +G+QIH V+K G + S + YA+ +E+A+++F E + + W+ M
Sbjct: 145 AQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTM 203
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS---------------------- 194
+ GY++C ++ A +F +MP K++ W +I+G AK
Sbjct: 204 IDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWS 263
Query: 195 --VDG------CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
VDG ++AL++F+ M+ E P + SV+ AC+ +GA +G+ VH L +
Sbjct: 264 SMVDGYISAGRYKEALEIFQQMQRE-ETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKR 322
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
+ D +G AL++ Y C D V++ ++ + N++I GL GR EDA +
Sbjct: 323 NSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALEL 382
Query: 307 FNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
F++L E N I+ ++ A G VD R+F+ M V PE+E
Sbjct: 383 FSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTM--------REFYGVDPELEH- 433
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
+ M+ ++ L +A L +M + + + L AC G+ + +
Sbjct: 434 ---YGCMVDLLGRSGLFSEAEDLINSM---PMKPNAAVWGALLGACRIHGNFDLAERVGK 487
Query: 423 HLVK-TPFESNVYVGTSLVDMYSRCGSIND 451
L++ P S YV L ++Y++ G +D
Sbjct: 488 ILLELEPQNSGRYV--LLSNIYAKVGRFDD 515
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 139/335 (41%), Gaps = 40/335 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I S N I + G L AR LFD+M R +SW++M+ GY ++ E+L + M R
Sbjct: 228 IGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQR 287
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ S++L+ C+ + ++ G+ +H + ++ + +G+ LL YA C ++
Sbjct: 288 EETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDM 347
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM------PKKDVVVWTKLISGY 191
VF+E+ E W+ M+ G DA ++F K+ P +V +
Sbjct: 348 GWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAH 407
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
A VD K L++F+ MRE P + ++ R G F E + L+ +
Sbjct: 408 AGFVD---KGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAE---DLINSMPMKP 461
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
+ ++ GAL+ GA R++ + E I L
Sbjct: 462 NAAVWGALL----------GACRIHGNFD------------------LAERVGKILLELE 493
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
NS Y + YA G+ DD ++ + M R I
Sbjct: 494 PQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGI 528
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 197/708 (27%), Positives = 342/708 (48%), Gaps = 97/708 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMP--IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N I+ G+ LV AR++F+ M R VVSWN M+ Y++ E+L L M+
Sbjct: 46 NALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQG 105
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ + TF ++L C +SL G++IH V SG + F+ + + L+ YA + +AK
Sbjct: 106 LGTDHVTFVSVLGAC---SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAK 162
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
R+F L +E W+ +++ + Q S A +F +M K DV
Sbjct: 163 RMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDV------------------ 203
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
PN T+ +VI + EG+ +H ++ GF+ D + AL
Sbjct: 204 ---------------KPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATAL 248
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-------TE 312
I Y C + A V+D+++ + + N +I + G +A ++ +L T+
Sbjct: 249 INMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTK 308
Query: 313 ANSISY--------------------------------NSMIKGYAVYGQVDDSKRLFEK 340
A +S +++ YA G +++++++F
Sbjct: 309 ATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNA 368
Query: 341 MPHRSIISLNTMISVIPEM-----------------ERNPVTWNSMISGYVQNNLHEKAL 383
M +R ++ +T+I R+ ++WN+MI+ YVQN A+
Sbjct: 369 MKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAM 428
Query: 384 QLYMTMRKLA-IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
+++ M A + TF + AC+ LG L + + LHA + ++ ESNV V +L++M
Sbjct: 429 KIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINM 488
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
Y+RCGS+ +A+ F++ V +WTA++ +S +G +EA+ LF+ M + + P+ T+
Sbjct: 489 YARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTY 548
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+L C G + +G + F M + + PT +H+ +VDLLGRSG L +A+E ++ MP
Sbjct: 549 TSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMP 608
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
E D V W L+AC +E+GE AA++++ LD + Y+ +SNIYA G W K
Sbjct: 609 FEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVAS 668
Query: 622 IRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+RK++ +KK PG S+IE++ ++H FS + +P + I L L
Sbjct: 669 VRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRL 716
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 136/576 (23%), Positives = 276/576 (47%), Gaps = 61/576 (10%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
+ TF T+L C+ +++G+ +H + S +E VG+ L+ Y C + +A+ VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 143 DEL--HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAKSVD 196
+ + + N + W+ M+ Y Q ++A ++ +M + D V + ++ +
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ 125
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK-VVHGLLIKCGFEFDESI 255
G E ++F +S +++ N +++ AR G+ + K + L + DE+
Sbjct: 126 GREIHNRVFYSGLDSFQSLAN-----ALVTMYARFGSVGDAKRMFQSLQTR-----DETS 175
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN--------GLISMGRIEDAELIF 307
A+I + + GA+R++ ++ S + IN ++ GR AE++
Sbjct: 176 WNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVA 235
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
N + + + ++I Y G +++ +F+KM R ++S WN
Sbjct: 236 NGF-DTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVS-----------------WN 277
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
MI YV N +AL+LY + RT++TF + ACS + +L QG+L+H+H+++
Sbjct: 278 VMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILER 337
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE---AV 484
+S V V T+LV+MY++CGS+ +A+ F+++ + + AW+ L+ Y+ +G G + A
Sbjct: 338 GLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKAR 397
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDL 543
+F+ + +D + ++ +++ V+ G MKIFR M + G+ P + V++
Sbjct: 398 KVFDRLGSRDTI----SWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEA 453
Query: 544 LGRSGHLHEAEEF---IKDMPIELDAVVWGALLSACWFWMNMEVGER--AAQKMFGLDKK 598
G L E + I + +E + VV L++ ++E ER AA K +K
Sbjct: 454 CASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAK-----EK 508
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
+ ++ + ++ G++ + +D+ + + VK D
Sbjct: 509 TVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPD 544
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 211/489 (43%), Gaps = 57/489 (11%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T +V I G+ G AR +FD+M R +VSWN M+ Y F E+L L
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQK 298
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
+ K + TF +IL C+ + +L G+ +H +L+ G + V + L+ YA C
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS 358
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD---AFDVFIKMPKKDVVVWTKLISGY 191
+EEA++VF+ + + + WS ++ Y D A VF ++ +D + W +I+ Y
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTY 418
Query: 192 AKSVDGCE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
+ +GC A+K+FR M + P+ TF +V+ ACA LG E K +H + + E
Sbjct: 419 VQ--NGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELE 476
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
+ + LI Y C G +E+AE +F
Sbjct: 477 SNVVVTNTLINMYARC-------------------------------GSLEEAERLFAAA 505
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
E +S+ +M+ ++ YG+ ++ LF++M + ++ + VT+ S++
Sbjct: 506 KEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD-------------LEGVKPDDVTYTSIL 552
Query: 371 SGYVQNNLHEKALQLYMTMRKL-AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
E+ + + M +L A+ T F+ + G L + L L PF
Sbjct: 553 FVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKEL---LESMPF 609
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSI---SSPNVAAWTALMNGYSHHGLGSEAVLL 486
E + + + G + +A+ + + A + A+ N Y+ HG+ + +
Sbjct: 610 EPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASV 669
Query: 487 FEIMLEQDI 495
+ M E+ +
Sbjct: 670 RKKMEERGL 678
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 179/401 (44%), Gaps = 57/401 (14%)
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+ P+ TF +V+ +C+ G EG+ +H + FE D +G ALI Y C++ A
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 273 MRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRLTEA----------------- 313
V++ ++ N N++I G +A +++ R+
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
Query: 314 ---------NSISY----------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
N + Y N+++ YA +G V D+KR+F+ SL T
Sbjct: 122 SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQ--------SLQT--- 170
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
R+ +WN++I + Q+ AL+++ M K + +T+ + S L
Sbjct: 171 ------RDETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVL 223
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+G+ +HA +V F++++ V T+L++MY +CGS ++A+ F + ++ +W ++ Y
Sbjct: 224 PEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCY 283
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
+G EA+ L++ + + ATFV +L AC + +G + + G+ +
Sbjct: 284 VLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEV 343
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
T +V++ + G L EA + M DAV W L+ A
Sbjct: 344 AVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGA 383
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 219/705 (31%), Positives = 347/705 (49%), Gaps = 66/705 (9%)
Query: 2 KLYATQSQTLMTQETLIVST-NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+L++ +T + +T + N +C L AR +FD+ P V WN+ L Y
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCA---SLQAARKVFDETPHPNVHLWNSTLRSYC 78
Query: 61 KWAKFDESLSLVSTMH-RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
+ +++E+L L M + + T L CA L L GK IH K+ +
Sbjct: 79 REKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSD 138
Query: 120 -FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK 178
FVGS L+ Y+ C ++ EA +VF+E + +LW+ M+ GY Q N +A +F +M
Sbjct: 139 MFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVM 198
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
D VV + T SV+ ACA+L G
Sbjct: 199 MDCVVL--------------------------------DPVTLVSVVSACAQLLNVKAGS 226
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYC--GCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
VHGL+I+ F+ D + +L+ Y GCE A ++ ++ + + +++I +
Sbjct: 227 CVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKI--AANLFSKMPEKDVISWSTMIACYAN 284
Query: 297 MGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI---ISL 349
+A +F+ + E NS++ S ++ AV +++ K++ + + S+
Sbjct: 285 NEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSV 344
Query: 350 NTMI-----------SVIPEMERNP----VTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+T + + +R P V+W +++SGY QN + K++ ++ M I
Sbjct: 345 STALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGI 404
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ A S LG QQ LH ++V++ F SNV+VG SL+++YS+CGS+ DA
Sbjct: 405 QPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVK 464
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV-PNAATFVGVLSACVRAG 513
F + +V W++++ Y HG G EA+ +F+ M++ V PN TF+ +LSAC AG
Sbjct: 465 LFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAG 524
Query: 514 LVNEGMKIF-RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
LV EG+KIF R + Y + P EH+ +VDLLGR G L +A + I MPI VWGAL
Sbjct: 525 LVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGAL 584
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
L AC N+E+GE AA+ +F LD Y++LSNIYAV GKW ++R R+ +K
Sbjct: 585 LGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLK 644
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSVV 677
K G S +E+ VH+F DR +P+ IY L L A + V
Sbjct: 645 KMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEV 689
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 169/546 (30%), Positives = 271/546 (49%), Gaps = 85/546 (15%)
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
+C + AK L D+ +L ++ YV N + A VF +P +W +I G
Sbjct: 734 SCLKKTHAKIFAYGLQYDSRILTKFAIM-YVSFNRIDAASIVFEDIPNPCSFLWNVMIRG 792
Query: 191 YAKSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
+A DG +L+L+ M E G P+++ F +++CA L GKV+H L+ CG
Sbjct: 793 FA--TDGRFLSSLELYSKMMEKGLK-PDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGC 849
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
D + AL++ Y C G IE A L+F++
Sbjct: 850 SNDLFVDAALVDMYAKC-------------------------------GDIEAARLVFDK 878
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ + +S+ SMI GYA G ++ F+ M RS
Sbjct: 879 MAVRDLVSWTSMISGYAHNGYNSETLGFFDLM--RS------------------------ 912
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
SG + N + S SVL AC LG+L++G+ H+++++T F
Sbjct: 913 -SGVIPNRV--------------------SILSVLL-ACGNLGALRKGEWFHSYVIQTGF 950
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
E ++ V T+++DMYS+CGS++ A+ F + ++ W+A++ Y HG G +A+ LF+
Sbjct: 951 EFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQ 1010
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSG 548
M++ + P+ TF VLSAC +GL+ EG F+ M + + + L +Y C+VDLLGR+G
Sbjct: 1011 MVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAG 1070
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L EA + I++MP+E DA +WG+LL AC N+++ E+ A +F LD +V+LSN
Sbjct: 1071 QLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSN 1130
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
IYA +W + +RK + K G S +E +++VH F V DR++P +YA LE
Sbjct: 1131 IYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEE 1190
Query: 669 LTANLN 674
L A +
Sbjct: 1191 LAAPMK 1196
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 37/317 (11%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
A +F+ +P WN M+ G++ +F SL L S M +K ++ F L CA
Sbjct: 770 AASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCA 829
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L+ L GK IH ++ G FV + L+ YA C +IE A+ VFD
Sbjct: 830 GLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFD------------ 877
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
KM +D+V WT +ISGYA + E L F MR SG +
Sbjct: 878 -------------------KMAVRDLVSWTSMISGYAHNGYNSE-TLGFFDLMRSSGV-I 916
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN + SV+ AC LGA +G+ H +I+ GFEFD + A+++ Y C + D A +
Sbjct: 917 PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQV 331
+D L +++I G A +F+++ +A + +++ ++ + G +
Sbjct: 977 FDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLL 1036
Query: 332 DDSKRLFEKMPHRSIIS 348
++ K F+ M +I+
Sbjct: 1037 EEGKMYFQLMTEEFVIA 1053
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 125/583 (21%), Positives = 224/583 (38%), Gaps = 94/583 (16%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +LF ++P + VVSW +L GY++ +S+ + M ++ + IL+ ++
Sbjct: 361 AVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSE 420
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L +H V++SG+ FVG+ L+ Y+
Sbjct: 421 LGIFQQALCLHGYVVRSGFNSNVFVGASLIELYS-------------------------- 454
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+C + DA +F M +DVV+W+ +I+ Y G E AL++F M ++ P
Sbjct: 455 -----KCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGE-ALEIFDQMVKNSTVRP 508
Query: 217 NEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
N TF S++ AC+ G EG K+ ++ D G +++ AM +
Sbjct: 509 NNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDI 568
Query: 276 YDRLENPC--------LNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAV 327
+R+ P L A I+ I MG L + L +++ Y + YAV
Sbjct: 569 INRMPIPAGPHVWGALLGACR--IHHNIEMGEAAAKNLFW--LDPSHAGYYILLSNIYAV 624
Query: 328 YGQVDDSKRLFEKMPHRSIISL--NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
G+ D+ L ++ R + + +M+ V R V S + H + ++
Sbjct: 625 DGKWDNVAELRTRIKERGLKKMFGQSMVEV-----RGGVH-----SFLASDRFHPDSQKI 674
Query: 386 YMTMRKLA----------------------------IDRTRSTFSVLFHA-----CSCLG 412
Y +RKL I T S + + A SC
Sbjct: 675 YELLRKLEAQMGKEVYIPDLDFLLHDTGAVLQFWQRIKATESKYKTIGSAPGTDTISCFS 734
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
L++ HA + + + + T MY I+ A F I +P W ++
Sbjct: 735 CLKK---THAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIR 791
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
G++ G ++ L+ M+E+ + P+ F L +C + G I + + G
Sbjct: 792 GFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSN 851
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
L +VD+ + G + A M + D V W +++S
Sbjct: 852 DLFVDAALVDMYAKCGDIEAARLVFDKMAVR-DLVSWTSMISG 893
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 142/323 (43%), Gaps = 48/323 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD+M +R +VSW +M+ GY+ E+L M S V N + ++L
Sbjct: 867 GDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVL 926
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C L +L G+ H V+++G+E V + ++ Y+ C ++ A+ +FDE + +
Sbjct: 927 LACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLV 986
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS M+ Y I G+ + KA+ LF M ++
Sbjct: 987 CWSAMIASYG--------------------------IHGHGR------KAIDLFDQMVKA 1014
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+ TF V+ AC+ G EGK+ L+ + EF I L + C +
Sbjct: 1015 GVR-PSHVTFTCVLSACSHSGLLEEGKMYFQLMTE---EF--VIARKLSNYACMVDLLGR 1068
Query: 272 AMRV---YDRLENPCLNASNSLINGLISMGRIED----AELIFNRLTEANSI--SYNSMI 322
A ++ D +EN + S+ L+ RI + AE I + L + + Y+ ++
Sbjct: 1069 AGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLL 1128
Query: 323 KG-YAVYGQVDDSKRLFEKMPHR 344
YA + ++ +++ + M R
Sbjct: 1129 SNIYAAKSRWNEVEKVRKMMARR 1151
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 14/186 (7%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
R+R LF AC+ S+ Q LH+ + KT + + T L +Y++C S+ A+
Sbjct: 2 RSRQVLVDLFQACNNGRSVSQ---LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKV 58
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML-EQDIVPNAATFVGVLSACVRAGL 514
F PNV W + + Y E + LF +M+ P+ T L AC +
Sbjct: 59 FDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRM 118
Query: 515 VNEGMKIFR-SMKSYGVVPTLEHYTCVVDLLGRSGHLHEA----EEFIKDMPIELDAVVW 569
+ G I + K+ + + + +V+L + G + EA EEF + D V+W
Sbjct: 119 LELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRP-----DTVLW 173
Query: 570 GALLSA 575
++++
Sbjct: 174 TSMVTG 179
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 188/649 (28%), Positives = 315/649 (48%), Gaps = 82/649 (12%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G G++ R +FD+M R VVSW +++ GY+K + E++SL M ++ N T
Sbjct: 185 GECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMV 244
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++S CA+L L G+Q+ + + E + + L+ Y C I++A+++FDE +
Sbjct: 245 GVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDK 304
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N +L++ ++ YV+ L + V +M K
Sbjct: 305 NLVLYNTIMSNYVRQGLAREVLAVLGEMLKHG---------------------------- 336
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
P+ T S + AC+ L GK HG +++ G E +++ A+I Y C
Sbjct: 337 -----PRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKC-- 389
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
G+ E A +F+R+ +S+NS+I G+
Sbjct: 390 -----------------------------GKQEMACRVFDRMLNKTRVSWNSLIAGFVRN 420
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G ++ + ++F MP ++S WN+MI VQ ++ ++A++L+
Sbjct: 421 GDMESAWKIFSAMPDSDLVS-----------------WNTMIGALVQESMFKEAIELFRV 463
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M+ I + T + AC LG+L + +H ++ K ++++GT+LVDM++RCG
Sbjct: 464 MQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGD 523
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
A F+ + +V+AWTA + + G G+ A+ LF+ ML+Q I P+ FV +L+A
Sbjct: 524 PQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTA 583
Query: 509 CVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
GLV +G IFRSMK YG+ P HY C+VDLLGR+G L EA I M +E + V
Sbjct: 584 LSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDV 643
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
+WG+LL+AC N+++ AA+++ LD + +V+LSNIYA G+W +R L
Sbjct: 644 IWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLK 703
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
K PG S IE+N ++ F+ D ++P I L+ + L +
Sbjct: 704 EKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDI 752
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 198/481 (41%), Gaps = 94/481 (19%)
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
+++ LI G++ G KA+ +FR + G +P+ +TF V+ AC + A EG VHG
Sbjct: 106 MFSSLIRGFSACGLG-YKAIVVFRQLMCMGA-VPDNFTFPFVLSACTKSAALTEGFQVHG 163
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
++K GFE D + +LI FY C D RV+D++ + + SLI G G ++
Sbjct: 164 AIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKE 223
Query: 303 AELIF----------NRLT-----------------------------EANSISYNSMIK 323
A +F N +T E N++ N+++
Sbjct: 224 AVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVD 283
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
Y G +D ++++F++ +++N V +N+++S YV+ L + L
Sbjct: 284 MYMKCGAIDKARKIFDEC-----------------VDKNLVLYNTIMSNYVRQGLAREVL 326
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+ M K R T ACS L + G+ H ++++ E V ++++MY
Sbjct: 327 AVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMY 386
Query: 444 SRCGS-----------INDAQAS--------------------FSSISSPNVAAWTALMN 472
+CG +N + S FS++ ++ +W ++
Sbjct: 387 MKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIG 446
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
+ EA+ LF +M + I + T VGV SAC G ++ I +K +
Sbjct: 447 ALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHF 506
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+ T +VD+ R G A + M ++ D W A + A M ME A ++
Sbjct: 507 DMHLGTALVDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGA----MAMEGNGTGAIEL 561
Query: 593 F 593
F
Sbjct: 562 F 562
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 136/334 (40%), Gaps = 68/334 (20%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N I RNG + +A +F MP +VSWNTM+ + + F E++ L M
Sbjct: 408 VSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSE 467
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ ++ T + S C L +L K IH + K +G+ L+ +A C + + A
Sbjct: 468 GITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSA 527
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+VF+ KM K+DV WT I A +G
Sbjct: 528 MQVFN-------------------------------KMVKRDVSAWTAAIGAMAMEGNG- 555
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI--- 255
A++LF M + G P+ F +++ A + HG L++ G+ S+
Sbjct: 556 TGAIELFDEMLQQGIK-PDGVVFVALLTALS-----------HGGLVEQGWHIFRSMKDI 603
Query: 256 -GGALIEFYCGCEAFDGAMRVYDRLENP-CLNASNSLINGLISMGRIEDAELIFNRLTEA 313
G A + GC + D L L+ + SLIN + ++E ++I+ L A
Sbjct: 604 YGIAPQAVHYGC--------MVDLLGRAGLLSEALSLINSM----QMEPNDVIWGSLLAA 651
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
+ N I YA ++R+ E P R+ I
Sbjct: 652 CRVHKNVDIAAYA-------AERISELDPERTGI 678
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 198/624 (31%), Positives = 313/624 (50%), Gaps = 116/624 (18%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTM--HRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
+V N L +S+ +S L H S + N ++ L C Q + GK +
Sbjct: 1 MVCRNNFLIQFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGL 60
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
HC +LK G G L +A W+++L YV+ + +
Sbjct: 61 HCEILKRG---------GCLDLFA----------------------WNILLNMYVKSDFL 89
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
DA +F +MP+++ + + LI GYA+SV E A++LF +R E +PN++TF SV++
Sbjct: 90 CDASKLFDEMPERNTISFVTLIQGYAESVRFLE-AIELF--VRLHREVLPNQFTFASVLQ 146
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
A C +G LN
Sbjct: 147 A--------------------------------------CATMEG------------LNL 156
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
N + +I +G D N+++ YA G++++S LF + PHR
Sbjct: 157 GNQIHCHVIKIGLHSDV------------FVSNALMDVYAKCGRMENSMELFAESPHR-- 202
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
N VTWN++I G+VQ EKAL+L++ M + + T T+S
Sbjct: 203 ---------------NDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALR 247
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
AC+ L +L+ G +H+ VKT F+ ++ V +L+DMY++CGSI DA+ F ++ + +
Sbjct: 248 ACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVS 307
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM- 525
W A+++GYS HGLG EA+ +F+ M E ++ P+ TFVGVLSAC AGL+++G F SM
Sbjct: 308 WNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMI 367
Query: 526 KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
+ +G+ P +EHYTC+V LLGR GHL +A + I ++P + +VW ALL AC ++E+G
Sbjct: 368 QDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELG 427
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
+AQ++ ++ + + +V+LSN+YA +W +RK + VKK+PG SWIE
Sbjct: 428 RISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGT 487
Query: 646 VHAFSVEDRNNPNCNVIYATLEHL 669
VH+F+V D ++P VI LE L
Sbjct: 488 VHSFTVGDTSHPEVRVINGMLEWL 511
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 184/442 (41%), Gaps = 115/442 (26%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A LFD+MP R +S+ T++ GY++ +F E++ L +HR V N+ TF+++L
Sbjct: 89 LCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQA 147
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
CA + L G QIHC V+K G FV + L+ YA C +E + +F E N++ W
Sbjct: 148 CATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTW 207
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++VG+VQ DG EKAL+LF M E
Sbjct: 208 NTVIVGHVQLG-------------------------------DG-EKALRLFLNMLEY-R 234
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
E T+ S +RACA L A G +H L +K F+ D + ALI+ Y C
Sbjct: 235 VQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKC------- 287
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
G I+DA L+F+ + + + +S+N+MI GY+++G +
Sbjct: 288 ------------------------GSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGRE 323
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
+ R+F+KM E E P
Sbjct: 324 ALRIFDKM---------------QETEVKP------------------------------ 338
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDA 452
+ TF + AC+ G L QGQ +++ E + T +V + R G ++ A
Sbjct: 339 ---DKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKA 395
Query: 453 QASFSSIS-SPNVAAWTALMNG 473
I P+V W AL+
Sbjct: 396 VKLIDEIPFQPSVMVWRALLGA 417
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 36/221 (16%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
+CGR + + LF + P R V+WNT++ G+ + +++L L M V+ E
Sbjct: 184 AKCGR---MENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEV 240
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T+S+ L CA L +L G QIH L +K+ ++ V + L+ YA C I++A+ VFD +
Sbjct: 241 TYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLM 300
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
++ +E+ W+ M+ GY L +A +F KM + +V
Sbjct: 301 NKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEV------------------------ 336
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
P++ TF V+ ACA G +G+ +I+
Sbjct: 337 ---------KPDKLTFVGVLSACANAGLLDQGQAYFTSMIQ 368
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV TN I + G + AR +FD M + VSWN M+ GYS E+L + M
Sbjct: 274 IVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQE 333
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQ-IHCLVLKSGYE-CFEFVGSGLLFFYANCFEI 135
+ VK ++ TF +LS CA L G+ ++ G E C E + +++ +
Sbjct: 334 TEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHY-TCMVWLLGRGGHL 392
Query: 136 EEAKRVFDEL-HEDNELLWSLML 157
++A ++ DE+ + + ++W +L
Sbjct: 393 DKAVKLIDEIPFQPSVMVWRALL 415
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 191/634 (30%), Positives = 313/634 (49%), Gaps = 58/634 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G++ A ++FD +P R V+W ++ GYS+ + +L L M V+ + ++
Sbjct: 184 KAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLAS 243
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
S C+ L + G+QIH ++ E V + L+ Y C + A+R+FD
Sbjct: 244 AASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFD------ 297
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK-SVDGCEKALKLFRWM 208
M +++V WT +I+GY + S+D +A+ +F +
Sbjct: 298 -------------------------SMENRNLVSWTTMIAGYMQNSLD--TEAMSMFWQL 330
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
++G P+ + S++ +C L A +G+ VH +IK E DE + ALI+ Y CE
Sbjct: 331 SQAGWQ-PDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEH 389
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN-------------- 314
A V++ L + N++I G +G + A IF ++ +
Sbjct: 390 LTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGV 449
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTW 366
S S + + ++G + S + ++I + + S++ + + R+ V W
Sbjct: 450 SSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIW 509
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N+MI G QN E+A++L+ +R + TF L S L S+ GQ HA ++K
Sbjct: 510 NAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIK 569
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+S+ ++ +L+DMY++CG I + + F S +V W ++++ Y+ HG EA+ +
Sbjct: 570 AGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHV 629
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLG 545
F +M + PN TFV VLSAC AGLV+EG+ F SMK+ Y V P EHY VV+L G
Sbjct: 630 FGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFG 689
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
RSG LH A+EFI+ MPIE A +W +LLSAC + N+E+G A + D V+
Sbjct: 690 RSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVL 749
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSW 639
+SNIYA G W +R+ + V K+PG SW
Sbjct: 750 MSNIYASKGLWADAQKLRQGMDCAGVVKEPGYSW 783
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/571 (23%), Positives = 253/571 (44%), Gaps = 62/571 (10%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV------KLNET 85
G+L AR LFD MP R +VSW + + Y++ + D++L L + + NE
Sbjct: 79 GRLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEF 138
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
++ L CAQ + G+Q+H + K G + FVG+ L+ YA I+ A VFD L
Sbjct: 139 LLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDAL 198
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
N + W+ ++ GY Q A ++F +M +DG
Sbjct: 199 PARNPVTWTAVITGYSQAGQAGVALELFGRM-----------------GLDGVR------ 235
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
P+ + S AC+ LG G+ +HG + E D S+ ALI+ YC
Sbjct: 236 ----------PDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCK 285
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN---------SI 316
C A R++D +EN L + ++I G + +A +F +L++A SI
Sbjct: 286 CSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSI 345
Query: 317 -----SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE--------MERNP 363
S ++ +G V+ V + ++ ++I + + E E +
Sbjct: 346 LNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDA 405
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
+++N+MI GY + A++++ MR ++ + TF L S L+ + +H
Sbjct: 406 ISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGL 465
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
+VK+ ++Y G++L+D+YS+ ++DA+ FS + + ++ W A++ G + + G EA
Sbjct: 466 IVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEA 525
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
V LF + + PN TFV +++ + G + + G ++D+
Sbjct: 526 VKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDM 585
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+ G + E + + + D + W +++S
Sbjct: 586 YAKCGFIEEG-RLLFESTLGKDVICWNSMIS 615
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 221/490 (45%), Gaps = 43/490 (8%)
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHE--------DNELLWSLMLVGYVQCNLMSDAFDVF 173
G L +C + +RV H + L +L+L GY + + DA +F
Sbjct: 29 GGSLAQLLLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLF 88
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGE-----NMPNEYTFDSVIRA 227
MP +++V W IS YA+ G E AL LF +G PNE+ S +RA
Sbjct: 89 DSMPSRNLVSWGSAISMYAQ--HGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRA 146
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL--ENPCLN 285
CA+ A G+ VHG+ K G + + +G AL+ Y D AM V+D L NP
Sbjct: 147 CAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPV-- 204
Query: 286 ASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRL---- 337
++I G G+ A +F R+ + S + G V+ +++
Sbjct: 205 TWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYA 264
Query: 338 FEKMPHRSIISLNTMIS-------------VIPEME-RNPVTWNSMISGYVQNNLHEKAL 383
+ +N +I + ME RN V+W +MI+GY+QN+L +A+
Sbjct: 265 YRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAM 324
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
++ + + + + ++C L ++ QG+ +HAH++K ES+ YV +L+DMY
Sbjct: 325 SMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMY 384
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++C + +A+A F +++ + ++ A++ GY+ G + AV +F M + P+ TFV
Sbjct: 385 AKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFV 444
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
+L + +I + G L + ++D+ + + +A + + +
Sbjct: 445 SLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDA-KLVFSLMQN 503
Query: 564 LDAVVWGALL 573
D V+W A++
Sbjct: 504 RDMVIWNAMI 513
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 10/175 (5%)
Query: 409 SCLGSLQQGQLL---HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
SCL + ++L HA V + ++++ L+ YS+ G + DA+ F S+ S N+
Sbjct: 38 SCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLV 97
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIV------PNAATFVGVLSACVRAGLVNEGM 519
+W + ++ Y+ HG +A+LLF PN L AC ++ G
Sbjct: 98 SWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGE 157
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
++ G+ + T +V+L ++G + A +P + V W A+++
Sbjct: 158 QVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPAR-NPVTWTAVIT 211
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I + G + R LF+ + V+ WN+M+ Y++ +E+L + M + V
Sbjct: 579 SNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGV 638
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY 115
+ N TF ++LS CA L+D H +K+ Y
Sbjct: 639 EPNYVTFVSVLSACAHAG-LVDEGLHHFNSMKTKY 672
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 189/585 (32%), Positives = 292/585 (49%), Gaps = 91/585 (15%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE----IEEA 138
N FS L C+ L L K IH ++++ C F S L+ F + I+ A
Sbjct: 18 NPKLFS--LETCSDLTHL---KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYA 72
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
R+F ++ N +++ M+ G+ AF +++ ++ +
Sbjct: 73 SRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGL----------------- 115
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+P+ TF ++++C +L G HG +IK GFE D
Sbjct: 116 ----------------LPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKD------ 153
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
VY NSL++ + G E A LIF R+ + +S+
Sbjct: 154 ----------------VY---------VQNSLVHMYATFGDTEAATLIFQRMYYVDVVSW 188
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
SMI+G+ G V+ +++LF++MP E+N VTW++MISGY QNN
Sbjct: 189 TSMIRGFNKCGDVESARKLFDQMP-----------------EKNLVTWSTMISGYAQNNH 231
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+KA++L+ ++ + + + +C+ LG+L+ G+ H ++VK N+ +GT+
Sbjct: 232 FDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTA 291
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
LVDMY+RCGSI+ A F + + +WTAL+ G + HG ++ F M+E + P
Sbjct: 292 LVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPR 351
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
TF VLSAC GLV G +IF SMK + V P LEHY C+VDLLGR+G L EAE F+
Sbjct: 352 DITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFV 411
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
MP++ +A VWGALL AC N E+GER + + L + YV+LSNIYA +W
Sbjct: 412 LKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWE 471
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
K ++R+ + +KK PG S IEL+ RVH F++ D ++P + I
Sbjct: 472 KVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKI 516
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 158/309 (51%), Gaps = 6/309 (1%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +F Q+ + +N M+ G+S D++ R + + TF ++ C +
Sbjct: 72 ASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTK 131
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L+ + G Q H ++K G+E +V + L+ YA + E A +F ++ + + W+ M
Sbjct: 132 LHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSM 191
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ G+ +C + A +F +MP+K++V W+ +ISGYA++ + +KA++LF+ ++ G
Sbjct: 192 IRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQN-NHFDKAVELFKVLQSQGVR-A 249
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
NE SVI +CA LGA G+ H ++K G + +G AL++ Y C + D A+ V+
Sbjct: 250 NETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVF 309
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVD 332
+ L + +LI GL G E + F + EA I++ +++ + G V+
Sbjct: 310 EDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVE 369
Query: 333 DSKRLFEKM 341
++FE M
Sbjct: 370 RGFQIFESM 378
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 161/348 (46%), Gaps = 71/348 (20%)
Query: 6 TQSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
T++ TL+ Q +VS I + G + +AR LFDQMP + +V+W+TM+ GY++
Sbjct: 170 TEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQN 229
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
FD+++ L + V+ NET +++S CA L +L G++ H V+K+G +G
Sbjct: 230 NHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILG 289
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ L+ YA C I++A VF++L E + L W+ ++ G
Sbjct: 290 TALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLA--------------------- 328
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
+ GY+ E++LK F M E+G P + TF +V+ AC+ HG
Sbjct: 329 -----MHGYS------ERSLKYFATMVEAGLT-PRDITFTAVLSACS-----------HG 365
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
L++ GF+ ES M+ R+E P L +++ L G++E+
Sbjct: 366 GLVERGFQIFES------------------MKRDHRVE-PRLEHYGCMVDLLGRAGKLEE 406
Query: 303 AE-LIFNRLTEANSISYNSMIKGYAVYGQVDDSKR----LFEKMPHRS 345
AE + + N+ + +++ ++ + +R L + +P S
Sbjct: 407 AERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHS 454
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 118/276 (42%), Gaps = 30/276 (10%)
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL----VDMYSRCGSINDAQASFSSISSPN 463
CS L L+ ++HA++++T +V+ + L VD S I+ A FS I +PN
Sbjct: 27 CSDLTHLK---IIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPN 83
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+ + A++ G+S +A + Q ++P+ TF ++ +C + ++ G +
Sbjct: 84 LFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHG 143
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
+ +G + +V + G EA I +D V W +++ ++E
Sbjct: 144 HIIKHGFEKDVYVQNSLVHMYATFGDT-EAATLIFQRMYYVDVVSWTSMIRGFNKCGDVE 202
Query: 584 VGERAAQKMFGLDKKPISAYVILSNI---YAVLGKWGKKMDIRKRLTHLEVKKD------ 634
+A+K+F D+ P V S + YA + K +++ K L V+ +
Sbjct: 203 ----SARKLF--DQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVS 256
Query: 635 --PGCSW---IELNSRVHAFSVEDRNNPNCNVIYAT 665
C+ +EL R H + V +N N+I T
Sbjct: 257 VISSCAHLGALELGERAHDYVV--KNGMTLNLILGT 290
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 193/635 (30%), Positives = 311/635 (48%), Gaps = 58/635 (9%)
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
C+ + + Q+H L K G+ + + + ++ Y C I A++VF + + + W
Sbjct: 3 CSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSW 62
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESG 212
+ M+ GY + + M A D F +MP++D V W +IS + S G ++L F M G
Sbjct: 63 NCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAF--SHHGLHIQSLGTFVEMWIQG 120
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
PN T+ SV+ ACA + F GK +H +++ D +G L++ Y C D +
Sbjct: 121 -CQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDAS 179
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-------------------A 313
RV++ L + SLI+G+ G E+ IF ++ +
Sbjct: 180 KRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGE 239
Query: 314 NSISYNSMIKG--------------------YAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+IS + G YA G + + FE M +IS TMI
Sbjct: 240 TNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMI 299
Query: 354 SVIPEM--------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+ ERN ++WN+M+ Y QN+ E+ L+LY+ M + +
Sbjct: 300 TSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWI 359
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
TF + ACS L + G + + VK S+V V S + +YSRCG I +AQ F SI
Sbjct: 360 TFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSI 419
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
N+ +W ++M GY+ +G G + + +F+ ML P+ T++ +LS C +GLV E
Sbjct: 420 QEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAK 479
Query: 520 KIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
F SM K +G+ TLEH+ C+VDL GR+G L A + I MP + +A +WGALLSAC
Sbjct: 480 YHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRI 539
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
+ E+ E A + + L+ + +Y++L+N Y+ G+ ++R+ + V+KDPGCS
Sbjct: 540 HHDTEMAELAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCS 599
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
WIE+ +RVH F+ D ++P IY LE + +
Sbjct: 600 WIEVCNRVHVFTANDTSHPQVKDIYKALEDIVKKI 634
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 121/546 (22%), Positives = 218/546 (39%), Gaps = 90/546 (16%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
+YA + L ++ + S N I + ++ A + F QMP R VSWNT++ +S
Sbjct: 44 IYAAEQVFLRIEKPSLFSWNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHH 103
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
+SL M + N T++++LS CA + GK +H +++ VG
Sbjct: 104 GLHIQSLGTFVEMWIQGCQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVG 163
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+GL+ YA C I+ +KRVF+ L E N + W+ ++ G + +D+F +M +KD V
Sbjct: 164 NGLVDMYAKCGLIDASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQM-RKDCV 222
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
+ M N + +++ C G+ +HG
Sbjct: 223 I-------------------------------MDN-FILATILGVCEGETNISIGEQLHG 250
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
+K G +G A + Y C F+ A ++ + + + ++I G +E
Sbjct: 251 FTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVER 310
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI----ISLNTMISVIPE 358
A FNR+ E N IS+N+M+ Y ++ +L+ M + + I+ TMI E
Sbjct: 311 ARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSE 370
Query: 359 M-------------------------------------------------ERNPVTWNSM 369
+ E+N ++WNS+
Sbjct: 371 LAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSI 430
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ GY QN K ++++ M T+ + CS G +++ + H + + F
Sbjct: 431 MGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAK-YHFNSMTKDF 489
Query: 430 ESNVYVG--TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLL 486
+V + +VD++ R G + A + PN + W AL++ H A L
Sbjct: 490 GISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHDTEMAELA 549
Query: 487 FEIMLE 492
+ +LE
Sbjct: 550 MKNLLE 555
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 177/436 (40%), Gaps = 91/436 (20%)
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
AC+ +G +HGL K GF ++ I ++I+ Y C+A A +V+ R+E P L +
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 287 SNSLING---LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM-- 341
N +I G L MGR D F ++ E +S+S+N++I ++ +G S F +M
Sbjct: 62 WNCMIYGYSKLHEMGRAIDT---FRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWI 118
Query: 342 ----P------------------------HRSIISLNTMISVI----------------- 356
P H I+ + + V+
Sbjct: 119 QGCQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDA 178
Query: 357 ------PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
E N VTW S+ISG E+ ++ MRK + + + C
Sbjct: 179 SKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEG 238
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
++ G+ LH VKT S+V VG + + MY++CG A +F ++++ +V +WT +
Sbjct: 239 ETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTM 298
Query: 471 MNGYSHHG-----------------------LGS--------EAVLLFEIMLEQDIVPNA 499
+ +SH G LG+ E + L+ +ML Q++ P+
Sbjct: 299 ITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDW 358
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
TFV ++ AC + G +I G+ + + L R G + EA+
Sbjct: 359 ITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDS 418
Query: 560 MPIELDAVVWGALLSA 575
+ E + + W +++
Sbjct: 419 IQ-EKNLISWNSIMGG 433
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 150/339 (44%), Gaps = 48/339 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S IT +G + AR+ F++MP R V+SWN ML Y + + ++E L L M R
Sbjct: 292 VISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLR 351
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V+ + TF T++ C++L G QI +K G V + + Y+ C IEE
Sbjct: 352 QEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEE 411
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ +FD + E N + W+ ++ GYA++ +G
Sbjct: 412 AQNLFDSIQEKNLISWN-------------------------------SIMGGYAQNGEG 440
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
K +++F+ M +G P+ T+ +++ C+ G E K + K D I
Sbjct: 441 M-KVIEIFQNMLMAGCK-PDHITYIAILSGCSHSGLVKEAKYHFNSMTK-----DFGISV 493
Query: 258 ALIEFYCGCEAFD--GAMRV-YDRLENPCLNASNSLINGLISMGRI----EDAELIFNRL 310
L F C + F G +++ D ++ + S+ L+S RI E AEL L
Sbjct: 494 TLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHDTEMAELAMKNL 553
Query: 311 TEANSISYNSMI---KGYAVYGQVDDSKRLFEKMPHRSI 346
E N+ ++ S I Y+ +G+++ + + M + +
Sbjct: 554 LELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRV 592
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 94/250 (37%), Gaps = 73/250 (29%)
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
ACS +G ++ LH K F +N + S++DMY +C +I A+ F I P++ +
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 467 WTALMNGY-------------------------------SHHGLGSEAVLLFEIMLEQDI 495
W ++ GY SHHGL +++ F M Q
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 496 VPNAATFVGVLSAC-----------------------------------VRAGLVNEGMK 520
PN+ T+ VLSAC + GL++ +
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKR 181
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP---IELDAVVWGALLSACW 577
+F +++ + VV +T ++ + G E + M + +D + +L C
Sbjct: 182 VFNTLREHNVVT----WTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCE 237
Query: 578 FWMNMEVGER 587
N+ +GE+
Sbjct: 238 GETNISIGEQ 247
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 191/666 (28%), Positives = 331/666 (49%), Gaps = 58/666 (8%)
Query: 32 GQLVTARNLFDQMPIR-TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
G + +AR +FD MP + V WN ++ GY+K A+F+ESL L MH + +E S +
Sbjct: 357 GDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCL 416
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L L+ DG H ++K G+ V + L+ FYA
Sbjct: 417 LKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYA-------------------- 456
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ N++ +A VF +MP +D + W +ISG + E A++LF M
Sbjct: 457 -----------KSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSE-AIELFVRMWM 504
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G + + T SV+ ACAR + G+VVHG +K G + S+ AL++ Y C +
Sbjct: 505 QGHEL-DSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWH 563
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYA 326
+++ + + + ++I G + + + + + + S++ G+A
Sbjct: 564 STNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFA 623
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNS 368
+ K + + L + + + EM ++ ++WN+
Sbjct: 624 GDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNT 683
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
+I GY +NN ++ L+ M L T + + A + + SL++G+ +HA+ ++
Sbjct: 684 LIGGYSRNNFANESFSLFSDML-LQFKPNTVTMTCILPAVASISSLERGREIHAYALRRG 742
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
F + Y +LVDMY +CG++ A+ F ++ N+ +WT ++ GY HG G +AV LFE
Sbjct: 743 FLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFE 802
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
M + P+ A+F +L AC +GL EG K F +M K Y + P L+HYTC+VDLL +
Sbjct: 803 QMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHT 862
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G+L EA EFI+ MPIE D+ +W +LL C ++++ E+ A ++F L+ + YV+L+
Sbjct: 863 GNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLA 922
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NIYA +W ++ ++ ++++ GCSWIE+ +VH F ++RN+P N I L+
Sbjct: 923 NIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLD 982
Query: 668 HLTANL 673
H+ +
Sbjct: 983 HVARRM 988
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 147/553 (26%), Positives = 250/553 (45%), Gaps = 48/553 (8%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N I R G + A +FD M R +SWN+ + GY D ++ L S M
Sbjct: 236 ANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGT 295
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+++ T ++L CA+L + GK +H +KSG LL+ ++E +
Sbjct: 296 EISSVTVLSVLPACAELGFELVGKVVHGYSMKSG----------LLW------DLESVQS 339
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK-DVVVWTKLISGYAKSVDGCE 199
DE L S ++ YV+C M A VF MP K +V VW ++ GYAK+ + E
Sbjct: 340 GIDEA------LGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAE-FE 392
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
++L LF M E G P+E+ +++ L +G V HG L+K GF ++ AL
Sbjct: 393 ESLLLFEQMHELGIT-PDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNAL 451
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANS 315
I FY D A+ V+DR+ + + NS+I+G S G +A +F R+ E +S
Sbjct: 452 ISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDS 511
Query: 316 ISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------VIPE 358
+ S++ G V+G + + E +++ + + S +
Sbjct: 512 TTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRN 571
Query: 359 M-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
M ++N V+W +MI+ Y + L +K L M I + + H + SL+QG
Sbjct: 572 MAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQG 631
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+ +H + ++ E + V +L++MY C ++ +A+ F +++ ++ +W L+ GYS +
Sbjct: 632 KSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRN 691
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
+E+ LF ML Q PN T +L A + G +I G +
Sbjct: 692 NFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTS 750
Query: 538 TCVVDLLGRSGHL 550
+VD+ + G L
Sbjct: 751 NALVDMYVKCGAL 763
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 143/564 (25%), Positives = 234/564 (41%), Gaps = 105/564 (18%)
Query: 32 GQLVTARNLFDQMPIRT--VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
G L AR +FD+MP R V W +++ Y+K F E +SL M V + S
Sbjct: 144 GDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSC 203
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L A L S+ +G+ IH L+ K G V + L+ Y+ C +E+A +VFD +H +
Sbjct: 204 VLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARD 263
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ + GY A D+F KM W+ +G E +
Sbjct: 264 AISWNSTISGYFSNGWHDRAVDLFSKM-------WS----------EGTEIS-------- 298
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF---------EFDESIGGALI 260
T SV+ ACA LG GKVVHG +K G DE++G L+
Sbjct: 299 --------SVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLV 350
Query: 261 EFYCGCEAFDGAMRVYDRLENPC-LNASNSLINGLISMGRIEDAELIFNRLTE------- 312
Y C A RV+D + + ++ N ++ G E++ L+F ++ E
Sbjct: 351 FMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDE 410
Query: 313 --------------------------------ANSISYNSMIKGYAVYGQVDDSKRLFEK 340
N++I YA +D++ +F++
Sbjct: 411 HALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDR 470
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
MPH+ IS WNS+ISG N L+ +A++L++ M + +T
Sbjct: 471 MPHQDTIS-----------------WNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTT 513
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ AC+ G+++H + VKT + +L+DMYS C + F +++
Sbjct: 514 LLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMA 573
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
NV +WTA++ Y+ GL + L + M+ I P+ VL AG +E +K
Sbjct: 574 QKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGF--AG--DESLK 629
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLL 544
+S+ Y + +E V + L
Sbjct: 630 QGKSVHGYAIRNGMEKLLPVANAL 653
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 218/460 (47%), Gaps = 39/460 (8%)
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKK--DVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+L +++ Y++C + A VF +MP + DV VWT L+S YAK+ D ++ + LFR M
Sbjct: 131 VLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGD-FQEGVSLFRQM 189
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ G + P+ + V++ A LG+ EG+V+HGLL K G ++ ALI Y C
Sbjct: 190 QCCGVS-PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGC 248
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK- 323
+ AM+V+D + + NS I+G S G + A +F+++ TE +S++ S++
Sbjct: 249 MEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPA 308
Query: 324 ----GYAVYGQV---------------------DD---SKRLFEKMPHRSIISLNTMISV 355
G+ + G+V D+ SK +F + + S +
Sbjct: 309 CAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDA 368
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
+P + N WN ++ GY + E++L L+ M +L I S L +CL +
Sbjct: 369 MPS-KGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCAR 427
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G + H +LVK F + V +L+ Y++ I++A F + + +W ++++G +
Sbjct: 428 DGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCT 487
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
+GL SEA+ LF M Q ++ T + VL AC R+ G + G++
Sbjct: 488 SNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETS 547
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++D+ H + ++M + + V W A++++
Sbjct: 548 LANALLDMYSNCSDWHSTNQIFRNMA-QKNVVSWTAMITS 586
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 116/272 (42%), Gaps = 26/272 (9%)
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
S+ ++ Y G + ++ +F++MP R + W S++S Y
Sbjct: 129 GSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVA---------------DVRVWTSLMSAY 173
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
+ ++ + L+ M+ + S + + LGS+ +G+++H L K
Sbjct: 174 AKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEAC 233
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
V +L+ +YSRCG + DA F S+ + + +W + ++GY +G AV LF M +
Sbjct: 234 AVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSE 293
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIF-RSMKSYGVVPTLEHYTCVVD-LLG------ 545
++ T + VL AC G G + SMKS G++ LE +D LG
Sbjct: 294 GTEISSVTVLSVLPACAELGFELVGKVVHGYSMKS-GLLWDLESVQSGIDEALGSKLVFM 352
Query: 546 --RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G + A MP + + VW ++
Sbjct: 353 YVKCGDMGSARRVFDAMPSKGNVHVWNLIMGG 384
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 196/673 (29%), Positives = 328/673 (48%), Gaps = 57/673 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNETTFS 88
+ L AR+LFDQ+P R VSW ++ GY + E+L L S M +S ++++ S
Sbjct: 61 KTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLS 120
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
L C + + G +H +K+G FVGS LL Y EI + +VFDE
Sbjct: 121 LGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDE---- 176
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
MP ++ V WT +I+G ++ E L F M
Sbjct: 177 ---------------------------MPTRNAVTWTAVITGLVRA-GYSEAGLAYFSGM 208
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
S + Y + ++A A GA G+ +H +K GF+ + + +L Y C
Sbjct: 209 GRSKVEY-DSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGK 267
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI----SYNSMIKG 324
D + + ++ + + +++ I MG+ + F R+ +N I +++++I
Sbjct: 268 LDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISC 327
Query: 325 YAVYGQVDDSKRLFEKMPHRSII-------SLNTMISVIPEME-----------RNPVTW 366
A + ++ ++L + + S+ T+ S E+ R+ +TW
Sbjct: 328 CANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITW 387
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+++I+ Y Q E+A + MR + + C + L+QG+ LHAH++
Sbjct: 388 STIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS 447
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
E V ++L+ MY++CGSI +A F ++ +WTA+++GY+ HG EA+ L
Sbjct: 448 VGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIEL 507
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLG 545
FE + + + P++ TF+GVL+AC AG+V+ G F SM K Y + P+ EHY C++DLL
Sbjct: 508 FENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLC 567
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G LH+AE I+ MPI+ D VVW LL AC +++ G+RAA ++ LD ++
Sbjct: 568 RAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHIT 627
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
L+NI+A GKW + +IR + V K+PG S +++ V AF DR++P IY
Sbjct: 628 LANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNI 687
Query: 666 LEHLTANLNSVVL 678
LE L + + +L
Sbjct: 688 LEELASGMEIYIL 700
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 198/439 (45%), Gaps = 28/439 (6%)
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
V+ N + DA D+F ++P++D V WT +ISGY S D E AL+LF MR E + +
Sbjct: 60 VKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSE-ALRLFSKMRLQSELRIDPFL 118
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
++ C + G +HG +K G +G AL++ Y + +V+D E
Sbjct: 119 LSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFD--E 176
Query: 281 NPCLNAS--NSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDS 334
P NA ++I GL+ G E F+ + E +S +Y +K A G ++
Sbjct: 177 MPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHG 236
Query: 335 KRLFEKMPHRSII-------SLNTMISVIPEMER-----------NPVTWNSMISGYVQN 376
+ + + + SL TM + +++ + V+W ++++ Y+Q
Sbjct: 237 RSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQM 296
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
+ LQ + MR + TFS + C+ L+ G+ LHAH++ F + + V
Sbjct: 297 GKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVA 356
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
S++ +YS+CG + F S+ ++ W+ ++ YS G G EA M +
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
PN VLS C ++ +G ++ + S G+ T + ++ + + G + EA +
Sbjct: 417 PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKI 476
Query: 557 IKDMPIELDAVVWGALLSA 575
D + D + W A++S
Sbjct: 477 FMD-SWKDDIISWTAMISG 494
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 160/425 (37%), Gaps = 84/425 (19%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N T + G+L + F +M VVSW T++ Y + K D L M SNV
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI 315
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
NE TFS ++S CA L G+Q+H VL G+ V + ++ Y+ C E+ +V
Sbjct: 316 PNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKV 375
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F + + + WS ++ Y Q GY E+A
Sbjct: 376 FCSMKFRDIITWSTIIAAYSQV--------------------------GYG------EEA 403
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+ MR G PNE+ SV+ C + +GK +H ++ G E + ALI
Sbjct: 404 FEYLSRMRSEGPK-PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALII 462
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
Y C G I +A IF + + IS+ +M
Sbjct: 463 MYAKC-------------------------------GSIAEASKIFMDSWKDDIISWTAM 491
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSI-------ISLNTMISVIPEMERNPVTWNSMISGYV 374
I GYA +G ++ LFE + + I + T S ++ +NSM Y
Sbjct: 492 ISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYH 551
Query: 375 QNNLHE----------KALQLY---MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
E +A +L+ +R + I +S L AC G + GQ
Sbjct: 552 ITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAA 611
Query: 422 AHLVK 426
A ++K
Sbjct: 612 AEVLK 616
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 28/309 (9%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+ +K + D++ LF+++P +R+ V+W ++ISGYV ++
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLP-----------------QRDEVSWTNIISGYVNSSD 95
Query: 379 HEKALQLYMTMR---KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
+AL+L+ MR +L ID S+ C + G LH VKT ++V+V
Sbjct: 96 SSEALRLFSKMRLQSELRIDPF--LLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFV 153
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
G++L+DMY + G I + F + + N WTA++ G G + F M +
Sbjct: 154 GSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKV 213
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
++ + L A +G +N G I G + + + G L
Sbjct: 214 EYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLH 273
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP----ISAYVILSNIYA 611
+ M LD V W +++A + G +A ++M + P SA + +A
Sbjct: 274 TFRKMRT-LDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFA 332
Query: 612 VLGKWGKKM 620
L KWG+++
Sbjct: 333 RL-KWGEQL 340
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 304/607 (50%), Gaps = 84/607 (13%)
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
L L ++ RS + + TF +L CA+L G + VL G+ FV + + F
Sbjct: 106 LPLYCSLLRS-ARPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHF 164
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
A C + EA+++FD H +D+V W LI
Sbjct: 165 LAVCSSMAEARKLFDGSH-------------------------------VRDLVSWNTLI 193
Query: 189 SGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
GY + G + AL++F M G P+E T V+ A+L G+ +HG +
Sbjct: 194 GGYVRR--GVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESH 251
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
G + +++ Y C G +E A+ +F
Sbjct: 252 GVRCTVRLMNVVMDMYIKC-------------------------------GDLERAKSVF 280
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
+ + +S+ +MI GYA +G +DD++++F++MP ER+ WN
Sbjct: 281 EGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMP-----------------ERDVFPWN 323
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
++++GYVQ ++AL+L+ M++ ++ T L ACS LG+L+ G +H ++ +
Sbjct: 324 ALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRR 383
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+V +GT+LVDMYS+CG+I A F I N WTA+++G ++HG A+ F
Sbjct: 384 RVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYF 443
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGR 546
+ M+E + P+ TF+GVLSAC AGLV EG + F M S Y + ++HY+C+VDLLGR
Sbjct: 444 QRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGR 503
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G+L EAE + MP+E DAVVWGAL AC N+ +GE+AA K+ LD YV+L
Sbjct: 504 AGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLL 563
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
+N+YA K +R + HL V+K PGCS IELN VH F V+D+++ + IY L
Sbjct: 564 ANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHTDIAAIYDCL 623
Query: 667 EHLTANL 673
+T +
Sbjct: 624 HEITLQI 630
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 199/417 (47%), Gaps = 25/417 (5%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFSTILS 92
+ AR LFD +R +VSWNT++ GY + E+L + M V +E T ++S
Sbjct: 171 MAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVS 230
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
AQL L G+++H V G C + + ++ Y C ++E AK VF+ + + +
Sbjct: 231 GSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVS 290
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
W+ M+VGY Q LM DA VF +MP++DV W L++GY + G E AL+LF M+E+
Sbjct: 291 WTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKE-ALRLFHDMQEAM 349
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
P++ T +++ AC++LGA G VH + + +G L++ Y C + A
Sbjct: 350 VE-PDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKA 408
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVY 328
+RV+ + ++I+GL + G + A F R+ E + I++ ++
Sbjct: 409 IRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHA 468
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G V + + F M + +ER ++ M+ + ++A L T
Sbjct: 469 GLVKEGQEFFSLMVSKY------------HLERKMKHYSCMVDLLGRAGYLDEAEHLVNT 516
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYS 444
M ++ + LF AC G++ G+ LV+ P +S +YV L +MY+
Sbjct: 517 M---PMEPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYV--LLANMYA 568
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 103/228 (45%), Gaps = 33/228 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IVS I + G + AR +FD+MP R V WN ++ GY + + E+L L M
Sbjct: 288 IVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQE 347
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ V+ ++ T +LS C+QL +L G +H + + +G+ L+ Y+ C IE+
Sbjct: 348 AMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEK 407
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A RVF E+ E N L W+ M+ G G+A
Sbjct: 408 AIRVFKEIPEKNALTWTAMISGLAN--------------------------HGHA----- 436
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
+ A+K F+ M E G P+E TF V+ AC G EG+ L++
Sbjct: 437 -DVAIKYFQRMIELGLQ-PDEITFIGVLSACCHAGLVKEGQEFFSLMV 482
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 197/676 (29%), Positives = 341/676 (50%), Gaps = 65/676 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNETTFSTILSVCA 95
AR L D+MP VS+N ++ YS+ + + SL + RS V+ + T++ L+ C+
Sbjct: 66 ARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACS 125
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+ L +GK +H L + G FV + L+ YA C ++ +A++VF
Sbjct: 126 RAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVF------------- 172
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
DA D ++D V W L+SGY ++ + L++F MR SG +
Sbjct: 173 ------------DAAD------ERDDVSWNALVSGYVRA-GAQDDMLRVFAMMRRSGIGL 213
Query: 216 PNEYTFDSVIRACARLG--AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
N + SVI+ CA VHG ++K GF+ D + A++ Y A A+
Sbjct: 214 -NSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAV 272
Query: 274 RVYDRLENPCLNASNSLINGL------ISMGRIEDAELIFN----RLTEANSISYNSMIK 323
++ + +P + N++I GL + + +A +++ R E +++S+I+
Sbjct: 273 ALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIR 332
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVT 365
+ G ++ K++ ++ + + S + ++ +++ VT
Sbjct: 333 ACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVT 392
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
W +MISG VQN L E+AL L+ + + T S + +AC+ L + G+ +
Sbjct: 393 WTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFAT 452
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K+ F +G S + MY+R G ++ A F + S ++ +W+A+++ ++ HG +A+
Sbjct: 453 KSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALR 512
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLL 544
F M++ +VPN TF+GVL+AC GLV+EG+K + +MK Y + PT++H TCVVDLL
Sbjct: 513 FFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLL 572
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L +AE FI+D + V+W +LL++C +ME G+ A ++ L ++YV
Sbjct: 573 GRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYV 632
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
L NIY G+ IR + VKK+PG SWIEL S VH+F D+++P N IY+
Sbjct: 633 NLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYS 692
Query: 665 TLEHLTANLNSVVLFD 680
L + + ++ + D
Sbjct: 693 KLAEMLSKIDKLTATD 708
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 213/457 (46%), Gaps = 38/457 (8%)
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
L + +L Y C L A + +MP+ + V + LI Y+++ E +L+ F R
Sbjct: 50 FLRNTLLAAY--CRLGGHARRLLDEMPRTNAVSFNLLIDAYSRAGQP-EASLETFARARR 106
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
S + +T+ + + AC+R G EGK VH L + G + +L+ Y C
Sbjct: 107 SAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMG 166
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIK--- 323
A +V+D + + N+L++G + G +D +F + + NS + S+IK
Sbjct: 167 QARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCA 226
Query: 324 ---------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE--------MERNPVTW 366
AV+G V + + +++ + + E ++ N V +
Sbjct: 227 GSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVF 286
Query: 367 NSMISGY------VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
N+MI+G V ++ +AL LY ++ ++ T TFS + AC+ G ++ G+ +
Sbjct: 287 NAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQI 346
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H ++K F+ + ++G++L+D+Y G + D F+S+ +V WTA+++G + L
Sbjct: 347 HGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELF 406
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI--FRSMKSYGVVPTLEHYT 538
A+ LF +L + P+ T V++AC + G +I F + +G + + +
Sbjct: 407 ERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGN-S 465
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
C + + RSG +H A ++M D V W A++S+
Sbjct: 466 C-IHMYARSGDVHAAVRRFQEMESH-DIVSWSAVISS 500
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 137/559 (24%), Positives = 236/559 (42%), Gaps = 100/559 (17%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N ++ R G + AR +FD R VSWN ++ GY + D+ L + + M RS +
Sbjct: 152 SNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGI 211
Query: 81 KLNETTFSTILSVCA-QLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
LN +++ CA + ++D +H V+K+G++ F+ S ++ YA + EA
Sbjct: 212 GLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEA 271
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+F + + N ++++ M+ G + + + V T ++
Sbjct: 272 VALFKSVLDPNVVVFNAMIAG----------------LCRDEAAVGTDVL---------- 305
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+AL L+ ++ G P E+TF SVIRAC G GK +HG ++K F+ D+ IG A
Sbjct: 306 REALSLYSEVQSRGME-PTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSA 364
Query: 259 LIEFY--CGC-----------------------------EAFDGAMRVYDRLENPCLNAS 287
LI+ Y GC E F+ A+ ++ L L
Sbjct: 365 LIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPD 424
Query: 288 ----NSLINGLISMGRIEDAELI--------FNRLTEANSISYNSMIKGYAVYGQVDDSK 335
+S++N S+ E I F R T NS I YA G V +
Sbjct: 425 PFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMG----NSCIHMYARSGDVHAAV 480
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
R F++M I+S W+++IS + Q+ AL+ + M +
Sbjct: 481 RRFQEMESHDIVS-----------------WSAVISSHAQHGCARDALRFFNEMVDAKVV 523
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG--TSLVDMYSRCGSINDAQ 453
TF + ACS G + +G L + +K + + + T +VD+ R G + DA+
Sbjct: 524 PNEITFLGVLTACSHGGLVDEG-LKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAE 582
Query: 454 ASF-SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP-NAATFVGVLSACVR 511
A SI W +L+ H L+ + ++E + P ++A++V + + +
Sbjct: 583 AFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIME--LQPSSSASYVNLYNIYLD 640
Query: 512 AGLVNEGMKIFRSMKSYGV 530
AG ++ KI MK GV
Sbjct: 641 AGELSLASKIRDVMKERGV 659
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 5/173 (2%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
L H SC + + +HAH+V+ ++++ +L+ Y R G A+ + N
Sbjct: 21 LHHLRSC-SAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTN 77
Query: 464 VAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
++ L++ YS G ++ F + + T+ L+AC RAG + EG +
Sbjct: 78 AVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVH 137
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G+ + +V + R G + +A + + D E D V W AL+S
Sbjct: 138 ALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQ-VFDAADERDDVSWNALVSG 189
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 192/664 (28%), Positives = 346/664 (52%), Gaps = 75/664 (11%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L +AR LFD+MP R +VS+ T++ +++ F+ + +L + ++N+ +
Sbjct: 107 GKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLT 166
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
T+L + +++ +H K G++ FVGSGL+ Y+
Sbjct: 167 TMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYS------------------ 208
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
C+L+SDA VF + +KD VVWT ++S Y+++ D E A +
Sbjct: 209 -------------LCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSEN-DCPENAFR----- 249
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
++C+ L C + +HG IK + + +GGAL++ Y C
Sbjct: 250 ---------------CAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGD 294
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKG 324
A ++ + + + +I+ + E A +F RL + N S +S+++
Sbjct: 295 IKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQA 354
Query: 325 YAVYGQVDDSKRLFE---KMPHRSII--------------SLNTMISVIPEM-ERNPVTW 366
Q+D K++ K+ H S + +++ + + + + N V+W
Sbjct: 355 CTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSW 414
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N+++ G+ Q+ L E+AL ++ M+ + T+ T+S + AC+ S++ +H + K
Sbjct: 415 NTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK 474
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ F ++ +G SL+D Y++CG I DA F + ++ +W A+++GY+ HG ++A+ L
Sbjct: 475 STFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALEL 534
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLG 545
F+ M + ++ N TFV +LS C GLVN G+ +F SM+ +G+ P++EHYTC+V LLG
Sbjct: 535 FDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLG 594
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G L++A +FI D+P A+VW ALLS+C N+ +G +A+K+ ++ + + YV+
Sbjct: 595 RAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVL 654
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
LSN+YA G + +RK + ++ V+K PG SW+E+ +HAFSV ++P+ VI A
Sbjct: 655 LSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAM 714
Query: 666 LEHL 669
LE L
Sbjct: 715 LEWL 718
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 198/442 (44%), Gaps = 40/442 (9%)
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+++L Y + ++ A +F +MP++++V + L+ +A+ D E A LFR +R G
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGD-FEAAAALFRRLRWEGH 158
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
+ N++ ++++ + A VH K G + + +G LI+ Y C A
Sbjct: 159 EV-NQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAE 217
Query: 274 RVYDRL----------------ENPC----LNASNSLINGLISMGRIEDAELIFNRLTEA 313
V++ + EN C + S IS R L +
Sbjct: 218 HVFNGIVRKDAVVWTAMVSCYSENDCPENAFRCAQSCSLLAISCARQGIHGCAIKTLNDT 277
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
+++ YA G + D++ FE +P+ +I L+ MIS Y
Sbjct: 278 EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSF-----------------MISRY 320
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
Q+N +E+A +L++ + + ++ + S + AC+ + L G+ +H H +K ES++
Sbjct: 321 AQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDL 380
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+VG +L+D Y++C ++ + FSS+ N +W ++ G+S GLG EA+ +F M
Sbjct: 381 FVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAA 440
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
+ T+ VL AC + +I S++ ++D + G++ +A
Sbjct: 441 QMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDA 500
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
+ + + +E D + W A++S
Sbjct: 501 LKVFQHL-MERDIISWNAIISG 521
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+++ + ++ +T+I N I + G + A +F + R ++SWN ++ GY+
Sbjct: 467 QIHCSIEKSTFNNDTVI--GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYAL 524
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVC 94
+ ++L L M++SNV+ N+ TF +LSVC
Sbjct: 525 HGQAADALELFDRMNKSNVESNDITFVALLSVC 557
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 206/697 (29%), Positives = 346/697 (49%), Gaps = 98/697 (14%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
++ + G + A+N+F +M R VVS N ++ G + + +E++ L M + +V+LN
Sbjct: 326 VSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNP 384
Query: 85 TTFSTILSVCAQLNSLIDGK----QIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEAK 139
++ IL+ + + L +GK ++H +++SG + +G+GL+ YA
Sbjct: 385 NSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYA--------- 435
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+C ++DA VF M KD V W +I+G ++ E
Sbjct: 436 ----------------------KCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLE 473
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
A+K F+ MR + E P+ +T S + +CA LG G+ +H +K G + D S+ AL
Sbjct: 474 -AVKTFQEMRRT-ELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNAL 531
Query: 260 IEFY--CG----CEAFDGAMRVYDRL------------ENPCLNASNSL----------- 290
+ Y CG C+ M YD + E L A S
Sbjct: 532 LALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPN 591
Query: 291 ----INGLISMGRIEDAEL-------IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFE 339
I L ++ + EL + R A++ N+++ Y G + + +F
Sbjct: 592 RVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFS 651
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+M R ++ V+WNSMISGY+ N L KA+ + M +
Sbjct: 652 RMSDR----------------QDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGF 695
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
TF+ + AC+ + +L++G +H V+ ES++ +G++LVDMY++CG I+ A F +
Sbjct: 696 TFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMM 755
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+ N+ +W ++++GY+ HG G++++ LF M Q +P+ TFVGVLSAC AGLVNEG
Sbjct: 756 PARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGF 815
Query: 520 KIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
F SM YG+ P +EH++C+VDLLGR G L++ E+F+ MP++ + ++W +L AC
Sbjct: 816 SHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCR 875
Query: 579 --WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPG 636
N +G RAA+ + ++ Y++LSN+YA GKW R + VKK+ G
Sbjct: 876 ANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAG 935
Query: 637 CSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
CSW+ + VH F D+++P ++IY L+ L +
Sbjct: 936 CSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKM 972
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 150/612 (24%), Positives = 256/612 (41%), Gaps = 78/612 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I R G L + R +FD+MP+R +VSW+ ++ GY++ +E+ L M
Sbjct: 112 NTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFM 171
Query: 82 LNETTFSTILSVCAQLN--SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE-IEEA 138
N F +++ C + L G QIH L+ K+ Y + L+ Y N ++ A
Sbjct: 172 PNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYA 231
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+R FD + N + + M+ Y Q AFD+F M K+ + G DG
Sbjct: 232 RRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKE--------VMG-----DGL 278
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI----KCGFEFDES 254
+ PNEYTF S+I A L G V+ L+ K GF D
Sbjct: 279 K----------------PNEYTFGSLISATCSLAN--SGLVLLEQLLTRVEKSGFLHDLY 320
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---T 311
+G AL+ + + A ++ ++ + + N LI GL+ R E+A +F +
Sbjct: 321 VGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSV 380
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS---LNTMISVIPEM--------- 359
E N SY ++ + + +++ KR ++ H +I LN I++ +
Sbjct: 381 ELNPNSYMIILTAFPEFHVLENGKRKGSEV-HAFLIRSGLLNAQIAIGNGLINMYAKCGA 439
Query: 360 ------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
++ VTWNSMI+G QN +A++ + MR+ + + T +
Sbjct: 440 INDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSS 499
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ LG + G+ LH +K + +V V +L+ +Y CG + + Q +FS + + +W
Sbjct: 500 CASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSW 559
Query: 468 TALMNGYSHHGLGS-EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
+L+ + EAV F +M+ PN TF+ +L+A L G +I +
Sbjct: 560 NSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVL 619
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC---------- 576
V ++ G+ G + E M D V W +++S
Sbjct: 620 KRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAM 679
Query: 577 -WFWMNMEVGER 587
W M+ G+R
Sbjct: 680 DMVWFMMQKGQR 691
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 123/527 (23%), Positives = 226/527 (42%), Gaps = 105/527 (19%)
Query: 102 DGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYV 161
D +++H + K+G+ F+ + L+ YA ++ ++VFDE+ N + WS ++ GY
Sbjct: 91 DAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYT 150
Query: 162 QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTF 221
+ +MP + CE LFR M G MPN Y F
Sbjct: 151 RN-----------RMPN-----------------EACE----LFRKMVSDG-FMPNHYAF 177
Query: 222 DSVIRACARLGAFCE--GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF-DGAMRVYDR 278
SVIRAC G + G +HGL+ K + D + LI Y D A R +D
Sbjct: 178 GSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDS 237
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLT--------EANSISYNSMI-------- 322
+ L + NS+I+ G A IF+ + + N ++ S+I
Sbjct: 238 IWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLAN 297
Query: 323 -----------------------------KGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
G+A G + +K +F+KM +R+++SL
Sbjct: 298 SGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSL---- 353
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
N +I G V+ E+A++L+M M+ +++ +++ ++ A
Sbjct: 354 -------------NGLIIGLVRQKRGEEAVELFMEMKD-SVELNPNSYMIILTAFPEFHV 399
Query: 414 LQQGQL----LHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
L+ G+ +HA L+++ + + +G L++MY++CG+INDA F + + + W
Sbjct: 400 LENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWN 459
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
+++ G + EAV F+ M ++ P+ T + LS+C G ++ G ++
Sbjct: 460 SMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKL 519
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G+ + ++ L G G++ E ++ M ++ D V W +L+ A
Sbjct: 520 GLDLDVSVSNALLALYGECGYVKECQKAFSLM-LDYDHVSWNSLIGA 565
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 24 AITEC-GRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
A+ C G+ G + N+F +M R VSWN+M+ GY +++ +V M + +
Sbjct: 632 ALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQR 691
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
L+ TF+T+LS CA + +L G ++H +++ E +GS L+ YA C I+ A R
Sbjct: 692 LDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRF 751
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISG 190
F+ + N W+ M+ GY + + + D+F +M P D V + ++S
Sbjct: 752 FEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSA 804
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 26/192 (13%)
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNS--------------MISGYVQNNLHEK 381
R H S+ + S IP P+ +N ++ Y + LH
Sbjct: 9 RRLAAYSHSSVFTFPRSASSIPHSHHYPLLFNPFTNPLPPSSIPLQVLVDLYKSSQLHHN 68
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
+Q + LA R R ++C GS + + LH L K F +++++ +L++
Sbjct: 69 PVQHDEKIESLA-QRYR-------YSC---GS-KDAEELHLQLFKNGFVNDLFLCNTLIN 116
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
+Y+R G + + F + N+ +W+ L++GY+ + + +EA LF M+ +PN
Sbjct: 117 IYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYA 176
Query: 502 FVGVLSACVRAG 513
F V+ AC G
Sbjct: 177 FGSVIRACQECG 188
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ IV + + + G++ A F+ MP R + SWN+M+ GY++ +SL L +
Sbjct: 726 ESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQ 785
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDG 103
M + TF +LS C+ + +G
Sbjct: 786 MKLQGPLPDHVTFVGVLSACSHAGLVNEG 814
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 197/669 (29%), Positives = 336/669 (50%), Gaps = 58/669 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G + A +F+ + + V + TML G++K + D++L M V+ F+
Sbjct: 81 RYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTY 140
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L VC L GK+IH L++KSG+ F +GL YA C ++ EA++VFD + E +
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERD 200
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ ++ GY Q + A ++ M CE+ LK
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVNLM---------------------CEENLK------ 233
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P+ T SV+ A + L GK +HG ++ GF+ +I AL++ Y C +
Sbjct: 234 ------PSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSL 287
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
A ++D + + + NS+I+ + ++A +IF ++ + + + G A++
Sbjct: 288 KTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMG-ALHA 346
Query: 330 QVD----DSKRLFEKMP-----HRSIISLNTMISVIPE--------------MERNPVTW 366
D + R K+ R++ +N++IS+ + R V+W
Sbjct: 347 CADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSW 406
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N+MI G+ QN +AL + M+ + T+ + A + L + +H +++
Sbjct: 407 NAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ NV+V T+LVDMY++CG+I A+ F +S +V W A+++GY HG+G A+ L
Sbjct: 467 NCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALEL 526
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLG 545
FE M + I PN TF+ V+SAC +GLV G+K F MK +Y + P+++HY +VDLLG
Sbjct: 527 FEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLG 586
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G L+EA +FI MP++ V+GA+L AC N+ E+ A+++F L+ + +V+
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVL 646
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
L+NIY W K +R + ++K PGCS +E+ + VH+F +P+ IYA
Sbjct: 647 LANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAF 706
Query: 666 LEHLTANLN 674
LE L +
Sbjct: 707 LEKLICQIK 715
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 150/331 (45%), Gaps = 19/331 (5%)
Query: 305 LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV 364
LIF + ++ + YG VD++ R+FE + + LN V
Sbjct: 59 LIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKK----LN-------------V 101
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+ +M+ G+ + + +KAL+ ++ MR ++ F+ L C L+ G+ +H L
Sbjct: 102 LYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
VK+ F +++ T L +MY++C +++A+ F + ++ +W ++ GYS +G+ A+
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
+ +M E+++ P+ T V VL A L+ G +I G + T +VD+
Sbjct: 222 EMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMY 281
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
+ G L A M +E + V W +++ A N + QKM KP V
Sbjct: 282 AKCGSLKTARLLFDGM-LERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSV 340
Query: 605 ILS-NIYAVLGKWGKKMDIRKRLTHLEVKKD 634
+ + + A LG + I K LE+ ++
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELELDRN 371
>gi|297820962|ref|XP_002878364.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324202|gb|EFH54623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 767
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 197/661 (29%), Positives = 327/661 (49%), Gaps = 86/661 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I + +L A LF P++ +SWN ++ GY K E+ +L M +K
Sbjct: 64 NTMIVAYSNSRRLADAEQLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 123
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
NE T ++L +C L L+ G+QIH +K+G++ V +GLL YA
Sbjct: 124 PNEYTLGSVLRMCTSLLLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYA----------- 172
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVDGCEK 200
QC +S+A +F M +K+ V WT +++GY+++ K
Sbjct: 173 --------------------QCKRISEAEYLFDTMAGEKNNVTWTSMLTGYSQN-GFAFK 211
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
A++ FR +R G N N+YTF SV+ ACA + A G VHG ++K GF+ + + ALI
Sbjct: 212 AIECFRDLRRDG-NQSNQYTFPSVLTACASVSACRVGVQVHGCIVKSGFKTNIYVQSALI 270
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SI 316
+ Y C + A + + +E + + NS+I G + G IE+A +F R+ E +
Sbjct: 271 DMYAKCRDLESARALLEGMEVDDVVSWNSMIVGCVRQGLIEEALSMFGRMHERDMKIDDF 330
Query: 317 SYNSMIKGYA---VYGQVDDSKRLFEKMPHRSIISLNTMISVIP----EMERNPVTWNSM 369
+ S++ +A ++ S P + SL M S + +E++ ++W ++
Sbjct: 331 TIPSILNCFASSRTEMKIASSAHCLIVKPGMRLTSLGIMDSALKVFEGMIEKDVISWTAL 390
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
++G N +E+AL+L+ MR I + + + A + L L+ GQ +H + +K+ F
Sbjct: 391 VTGNTHNGFYEEALKLFCNMRVGGIYPDQIVTASVLSASAELTLLEFGQQVHGNYIKSGF 450
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
S++ V SLV MY++CGS+ DA F+S+ ++ WT
Sbjct: 451 PSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWT--------------------- 489
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSG 548
C+ GL+ E + F SM++ YG+ P EHY C++DL GRSG
Sbjct: 490 -------------------CIIVGLIEEAQRYFDSMRTVYGITPGPEHYACMIDLFGRSG 530
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
+AEE + M +E DA VW A+L+A N+E GERAA+ + L+ YV+LSN
Sbjct: 531 DFVKAEELLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMKLEPNNAVPYVLLSN 590
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+Y+ G+ + ++R+ + + K+PGCSW+E +VH+F EDR +P IY+ ++
Sbjct: 591 MYSAAGRQDEAANVRRLMKSRNINKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDE 650
Query: 669 L 669
+
Sbjct: 651 M 651
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 209/688 (30%), Positives = 334/688 (48%), Gaps = 100/688 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST-MHRSNVKLNETTFSTI 90
G + AR+ FD + R V +WN M+ GY + E + S M S + + TF ++
Sbjct: 100 GNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSV 159
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L C ++IDG +IHCL LK G+ +V + L+ Y+ + A+ +FDE
Sbjct: 160 LKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE------ 210
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
MP +D+ W +ISGY +S + E AL L
Sbjct: 211 -------------------------MPVRDMGSWNAMISGYCQSGNAKE-ALTL-----S 239
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+G + T S++ AC G F G +H IK G E + + LI+ Y
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 271 GAMRVYDRLENPCLNASNSLINGL---------------ISMGRIEDAEL-------IFN 308
+V+DR+ L + NS+I + + RI+ L I +
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 309 RLTEANSISY------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
+L + + N+++ YA G VD ++ +F +P+ +IS
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS-- 417
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACS 409
WN++ISGY QN +A+++Y M + I + T+ + ACS
Sbjct: 418 ---------------WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 462
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
G+L+QG LH L+K +V+V TSL DMY +CG + DA + F I N W
Sbjct: 463 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNT 522
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-Y 528
L+ + HG G +AV+LF+ ML++ + P+ TFV +LSAC +GLV+EG F M++ Y
Sbjct: 523 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDY 582
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P+L+HY C+VD+ GR+G L A +FIK M ++ DA +WGALLSAC N+++G+ A
Sbjct: 583 GITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIA 642
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
++ +F ++ + + +V+LSN+YA GKW +IR ++K PG S +E++++V
Sbjct: 643 SEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEV 702
Query: 649 FSVEDRNNPNCNVIYATLEHLTANLNSV 676
F ++ +P +Y L L A L +
Sbjct: 703 FYTGNQTHPMYEEMYRELTALQAKLKMI 730
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 201/440 (45%), Gaps = 57/440 (12%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + +NK I G+L + +FD+M +R ++SWN+++ Y + ++SL
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCF 133
M S ++ + T ++ S+ +QL + + + L+ G+ + +G+ ++ YA
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++ A+ VF+ L + + W+ ++ GY Q +G+A
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQ--------------------------NGFA- 431
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+A++++ M E GE N+ T+ SV+ AC++ GA +G +HG L+K G D
Sbjct: 432 -----SEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRL- 310
+ +L + Y C + A+ ++ ++ P +N+ N+LI G E A ++F +
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLFYQI--PRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Query: 311 ---TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
+ + I++ +++ + G VD+ + FE M T + P ++ +
Sbjct: 545 DEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM--------QTDYGITPSLKH----YG 592
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
M+ Y + E AL+ ++ +++ S + L AC G++ G++ HL +
Sbjct: 593 CMVDMYGRAGQLETALKF---IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Query: 428 PFESNVYVGTSLVDMYSRCG 447
E +V L +MY+ G
Sbjct: 650 EPE-HVGYHVLLSNMYASAG 668
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 287/513 (55%), Gaps = 21/513 (4%)
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
N M A + +M +V V+ +I G+ +S + AL+L+ M + + P YTF S
Sbjct: 28 NRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQ-ALELYVQMLRANVS-PTSYTFPS 85
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
+I+AC + + VHG + + GF+ + +L++FY + ++RV+D +
Sbjct: 86 LIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERD 145
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+ A ++++GL+ +G + A +F+ + + N ++N++I GYA +VD ++ LF +MP
Sbjct: 146 VFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPA 205
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
R IIS W +MI+ Y QN +AL ++ M K I T +
Sbjct: 206 RDIIS-----------------WTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMAT 248
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ AC+ LG+L G+ +H ++++ F +VY+G++L+DMY++CGS++ + F + N
Sbjct: 249 VISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKN 308
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+ W +++ G + HG EA+ +F+ M + I PN TFV VLSAC AGL+ EG K F
Sbjct: 309 LFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFA 368
Query: 524 SM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
SM + + + P +EHY C+VDLL ++G L EA + I+ M +E +AV+WGALLS C N+
Sbjct: 369 SMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNL 428
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD-PGCSWIE 641
E+ + AA K+ L+ Y +L N+ A + +WG+ IR + V+K PG SWIE
Sbjct: 429 EIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWIE 488
Query: 642 LNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+ S+VH F+ D+++ + IY+ L L +
Sbjct: 489 MESQVHQFAASDKSHAASDEIYSLLAELDGQMK 521
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 223/475 (46%), Gaps = 55/475 (11%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
+YA +T Q+ ++ N+ I+ ++ A + QM I V +N M+ G+ +
Sbjct: 1 MYAVMVKTNTNQDCYLM--NQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQS 58
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
+ ++L L M R+NV TF +++ C ++ L + +H V ++G++ FV
Sbjct: 59 YQPVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQ 118
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ L+ FY++ IEE+ RVFDE+ E + W+ M+ G V+ MS A +F MP +++
Sbjct: 119 TSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLA 178
Query: 183 VWTKLISGYA--KSVDGCE----------------------------KALKLFRWMRESG 212
W LI GYA + VD E +AL +F M + G
Sbjct: 179 TWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHG 238
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+ P+E T +VI ACA LGA GK +H +++ GF D IG ALI+ Y C + D +
Sbjct: 239 IS-PDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRS 297
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVY 328
+ ++ +L L NS+I GL G E+A +F+++ + N +++ S++
Sbjct: 298 LLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHA 357
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G +++ ++ F M S+ P +E + M+ + L E+ALQL T
Sbjct: 358 GLIEEGRKRFASMTRDH--------SIPPGVEH----YGCMVDLLSKAGLLEEALQLIRT 405
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL-VKTPFESNVYVGTSLVDM 442
M+ ++ + L C +L+ Q+ L V P S Y T LV+M
Sbjct: 406 MK---LEPNAVIWGALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYY--TLLVNM 455
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
++A +VKT + Y+ + S ++ A +++ + PNV + A++ G+
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY----GVVPTLE 535
+A+ L+ ML ++ P + TF ++ AC GLV++ ++ ++ + G +
Sbjct: 61 PVQALELYVQMLRANVSPTSYTFPSLIKAC---GLVSQ-LRFAEAVHGHVWRNGFDSHVF 116
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
T +VD G + E+ +MP E D W ++S
Sbjct: 117 VQTSLVDFYSSMGRIEESVRVFDEMP-ERDVFAWTTMVSG 155
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 286/511 (55%), Gaps = 22/511 (4%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A + ++ ++ ++ +I G A S + + L +++ M G +P+ YT V++AC
Sbjct: 92 ALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGI-VPDNYTIPFVLKAC 150
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A A EG+ VHG IK G D + L+ Y C+ A +V+D L +
Sbjct: 151 AESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWT 210
Query: 289 SLINGLISMGRIEDA---ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
++I G + MG + +I N + N+++ Y G + ++++F++MP ++
Sbjct: 211 TMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKN 270
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
++S WNSMISG Q +++L ++ M++L + T +
Sbjct: 271 VVS-----------------WNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVL 313
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
++C+ LG L+ G+ +HA+L + ++ ++G +LVDMY++CGSI+ A F +++ +V
Sbjct: 314 NSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVY 373
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
++TA++ G + HG G +A+ LF M + I P+ TFVGVL+AC GLV EG K F M
Sbjct: 374 SYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDM 433
Query: 526 KS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
+ Y + P LEHY C+VDLLGR+G ++EAEEFI++MPIE DA V GALL AC +E+
Sbjct: 434 STIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVEL 493
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
GE +K+ ++ + AYV++SNIY+ +W + +RK + ++K PGCS IEL+
Sbjct: 494 GESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDG 553
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
+H F D+++P IY L+ + ++L +
Sbjct: 554 VIHEFQKGDKSHPKIKEIYKLLDEIMSHLKN 584
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 187/425 (44%), Gaps = 58/425 (13%)
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
E L + M + + T +L CA+ ++ +G+++H +K G +V + L+
Sbjct: 123 EGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLM 182
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ---------------CNLMSDAF- 170
YA C I A++VFD + + + W+ M+ GYV+ N+ D F
Sbjct: 183 RMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFV 242
Query: 171 ------------------DVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
VF +MP K+VV W +ISG A+ +++L +FR M+ G
Sbjct: 243 GNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQK-GQFKESLYMFRKMQRLG 301
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
P++ T +V+ +CA LG GK VH L + D IG AL++ Y C + D A
Sbjct: 302 VK-PDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQA 360
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVY 328
V+ + + + ++I GL G+ A +F+ + E + +++ ++ +
Sbjct: 361 CWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHV 420
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G V++ ++ FE M +T+ ++ P++E + M+ + L +A +
Sbjct: 421 GLVEEGRKYFEDM--------STIYNLRPQLEH----YGCMVDLLGRAGLINEAEEF--- 465
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCG 447
+R + I+ L AC G ++ G+ + + K P + YV S ++YS
Sbjct: 466 IRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMS--NIYSSAN 523
Query: 448 SINDA 452
DA
Sbjct: 524 RWRDA 528
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 161/390 (41%), Gaps = 82/390 (21%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR +F +MP++ VVSWN+M+ G ++ +F ESL + M R VK ++ T +L+ CA
Sbjct: 259 ARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCAN 318
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L L GK +H + ++ F+G+ L+ YA C I++A VF ++ + ++ M
Sbjct: 319 LGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAM 378
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+VG A D+F +MPK G E P
Sbjct: 379 IVGLAMHGQGGKALDLFSEMPKM-----------------GIE----------------P 405
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+E TF V+ AC+ +G EG+ + F+ +Y
Sbjct: 406 DEVTFVGVLTACSHVGLVEEGR----------------------------KYFEDMSTIY 437
Query: 277 DRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
+ P L +++ L G I +A E I N E ++ +++ ++G+V+ +
Sbjct: 438 NL--RPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGE 495
Query: 336 RLFEKMPHRSIISLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+ +K I ++E R + M + Y N AL+L TM++ +
Sbjct: 496 SVMKK---------------IEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNL 540
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
++T S+ + Q+G H +
Sbjct: 541 EKTPGCSSIELDG--VIHEFQKGDKSHPKI 568
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 286/536 (53%), Gaps = 25/536 (4%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y +C A +F +M +++VV W+ L+ GY + E L LFR + PNEY
Sbjct: 71 YSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLE-VLGLFRNLVSLDSAYPNEY 129
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
F V+ CA G EGK HG L+K G + + ALI Y C D AM++ D +
Sbjct: 130 IFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTV 189
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIK----------GY 325
+ + NS+++ L+ G +A + R+ + +S++Y S++ G
Sbjct: 190 PGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGL 249
Query: 326 AVYGQVDDSKRLFEKMPHRSIIS--------LNTMISVIPEMERNPVTWNSMISGYVQNN 377
++ Q+ + +F+ ++I LN +RN V W ++++ Y+QN
Sbjct: 250 QIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNG 309
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
E+ L L+ M TF+VL +AC+ L +L G LLH +V + F++++ VG
Sbjct: 310 HFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGN 369
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+L++MYS+ G+I+ + FS++ + +V W A++ GYSHHGLG +A+L+F+ M+ P
Sbjct: 370 ALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECP 429
Query: 498 NAATFVGVLSACVRAGLVNEGMKIF-RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
N TF+GVLSACV LV EG F + MK + V P LEHYTC+V LLGR+G L EAE F
Sbjct: 430 NYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENF 489
Query: 557 IKDMP-IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
+K ++ D V W LL+AC N +G++ + + +D + Y +LSN++A K
Sbjct: 490 MKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARK 549
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
W + IRK + +KK+PG SW+++ + H F E N+P I+ ++ L A
Sbjct: 550 WDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLA 605
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/500 (23%), Positives = 214/500 (42%), Gaps = 64/500 (12%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLV 72
++++ I N I + GQ AR LFD+M R VVSW+ ++ GY + E L L
Sbjct: 56 SKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLF 115
Query: 73 STM-HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ + NE F+ +LS CA + +GKQ H +LKSG ++V + L+ Y+
Sbjct: 116 RNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSR 175
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
CF ++ A ++ D + D+ ++ +L V+ +A V +M + V+W
Sbjct: 176 CFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMV-DECVIW------- 227
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
+ T+ SV+ CA++ G +H L+K G F
Sbjct: 228 -------------------------DSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVF 262
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL- 310
D + LI+ Y C A + +D L + + A +++ + G E+ +F ++
Sbjct: 263 DVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKME 322
Query: 311 ---TEANSISYNSMIKGYA-----VYGQVDDSKRLFEKMPHRSIISLNTMISVIPE---- 358
T N ++ ++ A YG + + + + I+ N +I++ +
Sbjct: 323 LEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVG-NALINMYSKSGNI 381
Query: 359 ----------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
M R+ +TWN+MI GY + L ++AL ++ M TF + AC
Sbjct: 382 DSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSAC 441
Query: 409 SCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP--NVA 465
L +Q+G ++K E + T +V + R G +++A+ + + +V
Sbjct: 442 VHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVV 501
Query: 466 AWTALMNG---YSHHGLGSE 482
AW L+N + ++ LG +
Sbjct: 502 AWRTLLNACHIHRNYNLGKQ 521
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 41/281 (14%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
++++A +T + + + ST I G+ G+++ AR FD + R VV+W +L Y
Sbjct: 249 LQIHAQLLKTGLVFDVFVSST--LIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYL 306
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ F+E+L+L + M + + NE TF+ +L+ CA L +L G +H ++ SG++
Sbjct: 307 QNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLI 366
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
VG+ L+ Y+ I+ + VF + + + W+ M+ GY L
Sbjct: 367 VGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGL--------------- 411
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
++AL +F+ M +GE PN TF V+ AC L EG
Sbjct: 412 -----------------GKQALLVFQDMMSAGE-CPNYVTFIGVLSACVHLALVQEGFYY 453
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
++K +FD G +E Y A G + D EN
Sbjct: 454 FDQIMK---KFDVEPG---LEHYTCMVALLGRAGLLDEAEN 488
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 138/284 (48%), Gaps = 21/284 (7%)
Query: 295 ISMGRIEDAELIFNRLTEANS--ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
+ G+ A+L+ T +S NS+I Y+ GQ +++LF++M
Sbjct: 39 LRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRML---------- 88
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL-AIDRTRSTFSVLFHACSCL 411
+RN V+W++++ GY+ + L L+ + L + F+++ C+
Sbjct: 89 -------QRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADS 141
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
G +++G+ H +L+K+ + YV +L+ MYSRC ++ A ++ +V ++ +++
Sbjct: 142 GRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSIL 201
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
+ G EA + + M+++ ++ ++ T+V VL C + + G++I + G+V
Sbjct: 202 SALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLV 261
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + ++D G+ G + A + + + + V W A+L+A
Sbjct: 262 FDVFVSSTLIDTYGKCGEVLNARKQFDGLR-DRNVVAWTAVLTA 304
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 389 MRKLAIDRTRSTFSV-LFHACS------------CLGSLQQGQLLHAHLV---KTPFESN 432
M L + R FS+ L H CS SL+ G+ +HA LV +T +S+
Sbjct: 1 MLVLKLPRVTPAFSMYLPHPCSLKEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSD 60
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
+ SL+++YS+CG A+ F + NV +W+ALM GY H G E + LF ++
Sbjct: 61 ITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVS 120
Query: 493 QD-IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
D PN F VLS C +G V EG + + G++ ++ + R H+
Sbjct: 121 LDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVD 180
Query: 552 EAEEFIKDMPIELDAVVWGALLSA 575
A + + +P + D + ++LSA
Sbjct: 181 SAMQILDTVPGD-DVFSYNSILSA 203
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 188/604 (31%), Positives = 307/604 (50%), Gaps = 89/604 (14%)
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
HCL +KSG + + ++ YA C EI A ++F E + + + W+ M+ G+V
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
A + F+K K+ Y +VDG Y+F S+++
Sbjct: 82 ETALE-FLKSMKR-----------YGFAVDG---------------------YSFGSILK 108
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
A +G G+ VH +++K G+E + G AL++ Y CE + A V+ +
Sbjct: 109 GVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVT 168
Query: 287 SNSLINGLISMG-----------------RIED-----------------------AELI 306
N+LI+G +G I+D A+++
Sbjct: 169 WNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIV 228
Query: 307 FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
+ L ++ N++I Y+ G ++D++R+F+ I + + V+W
Sbjct: 229 KHGLASDTTVC-NAIITAYSECGSIEDAERVFD--------------GAIETRDLDHVSW 273
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
NS+++G+ Q+ L E AL+ + MR + FS + +CS L +LQ GQ +H ++K
Sbjct: 274 NSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLK 333
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ FE N +V +SL+ MYS+CG I DA+ SF + + AW +L+ GY+ HG G A+ L
Sbjct: 334 SGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDL 393
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLG 545
F +M ++ + + TFV VL+AC GLV EG +SM+S YG+ P +EHY C++DLLG
Sbjct: 394 FFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLG 453
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G L EA+ I+ MP E DA+VW LL AC ++E+ + A + L+ + YV+
Sbjct: 454 RAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVL 513
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
LS+++ L +W +K I++ + VKK PG SWIE+ + V +F+ EDR++PNC IY
Sbjct: 514 LSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLR 573
Query: 666 LEHL 669
L L
Sbjct: 574 LGEL 577
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 138/565 (24%), Positives = 227/565 (40%), Gaps = 105/565 (18%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I + N I+ + G++ A +F + R VSWNTM+ G+ F+ +L + +M R
Sbjct: 34 IYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKR 93
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ +F +IL A + + G+Q+H +++K GYE F GS LL YA
Sbjct: 94 YGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYA------- 146
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+C + DAF+VF + ++ V W LISGYA+ D
Sbjct: 147 ------------------------KCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDR 182
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
A L M G + ++ TF ++ VH ++K G D ++
Sbjct: 183 G-TAFWLLDCMELEGVEI-DDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCN 240
Query: 258 ALIEFYCGCEAFDGAMRVYD-RLENPCLN--ASNSLINGLISMGRIEDAELIFNRLT--- 311
A+I Y C + + A RV+D +E L+ + NS++ G G EDA F +
Sbjct: 241 AIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQY 300
Query: 312 ------------------------------------EANSISYNSMIKGYAVYGQVDDSK 335
E N +S+I Y+ G ++D++
Sbjct: 301 VVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDAR 360
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
+ F+ P S I+ WNS+I GY Q+ + AL L+ M+ +
Sbjct: 361 KSFDATPKDSSIA-----------------WNSLIFGYAQHGRGKIALDLFFLMKDRRVK 403
Query: 396 RTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
TF + ACS +G +++G L + + ++D+ R G +++A+A
Sbjct: 404 LDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKA 463
Query: 455 SFSSIS-SPNVAAWTALMNGYSHHG---LGSE-AVLLFEIMLEQDIVPNAATFVGVLSAC 509
++ P+ W L+ G L S+ A L E+ E+ T+V + S
Sbjct: 464 LIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEH-----CTYVLLSSMF 518
Query: 510 VRAGLVNEGMKIFRSMKSYGV--VP 532
NE I R MK GV VP
Sbjct: 519 GHLRRWNEKASIKRLMKERGVKKVP 543
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 6/180 (3%)
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
S +L + + H +K+ +++Y +++ Y++CG I A F S + +W
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
++ G+ + G A+ + M + +F +L G V G ++ M
Sbjct: 70 TMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKM 129
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G + + ++D+ + + +A E K + I ++V W AL+S +VG+R
Sbjct: 130 GYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIR-NSVTWNALISG-----YAQVGDRG 183
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 203/669 (30%), Positives = 323/669 (48%), Gaps = 65/669 (9%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L AR LFD++P SWN++L + + L+ MH + N + L
Sbjct: 51 LAAARRLFDEIPRLDAASWNSLLAAHVSIGAHPAACRLLRAMHERGLAANTFALGSALRS 110
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
A + G Q+H L +K+G F + LL YA
Sbjct: 111 AAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYA----------------------- 147
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+C DA +F MP+++ V W L++GY +S A++LF M G
Sbjct: 148 --------KCGRTRDACRLFDGMPERNTVSWNALVAGYVES-GKVAPAVQLFVEMEREG- 197
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
+P+E TF +++ F ++ HG ++K G + A I Y C A +
Sbjct: 198 FLPDEATFAALLTVVNDSTCFLMHQL-HGKIVKYGSALGLIVLNAAITAYSQCGALANSR 256
Query: 274 RVYDRL-ENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI-----SYNSMIK---- 323
R++D + + L + N+++ + G +A F + A+ + S+ S+I
Sbjct: 257 RIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAE 316
Query: 324 -----GYAVYGQVDDSKRLFEKMPH--RSIISLNTMISVIPEME-----------RNPVT 365
G ++G V SK FE + H ++I++ T S ME ++ V+
Sbjct: 317 HRDHGGTVIHGLV--SKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVS 374
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WNSM++GY Q+ L AL+ + M+ I FS +CS L L+ G+ +H ++
Sbjct: 375 WNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVI 434
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
++ F SN +V +SL+ MYS+ G ++DA SF + W ++M GY+ HG
Sbjct: 435 RSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRS 494
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLL 544
LF MLE + + TFVG+++AC AGLV+EG +I +M+S YG+ +EHY C +DL
Sbjct: 495 LFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLY 554
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L +A+E I MP E DA+VW LL AC NME+ A + + + S YV
Sbjct: 555 GRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPRQHSTYV 614
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+LSN+Y+ LG W + ++K + + + K PG SWIE+ + VH+F+ ED ++P + IY
Sbjct: 615 LLSNMYSGLGMWSDRAIVQKEMKNKGLSKVPGWSWIEVKNEVHSFNAEDGSHPRMDEIYE 674
Query: 665 TLEHLTANL 673
L L N
Sbjct: 675 MLSLLLHNF 683
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 201/446 (45%), Gaps = 65/446 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMH 76
++ N AIT + G L +R +FD++ R+ ++SWN ML Y+ E++ ++M
Sbjct: 236 LIVLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMM 295
Query: 77 R-SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA----N 131
R S V+ + +F++I+S CA+ G IH LV K+G+E V + L+ Y N
Sbjct: 296 RASGVQPDMYSFTSIISACAEHRDH-GGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSEN 354
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C +E+A + FD L + + W+ ML GY Q L +D
Sbjct: 355 CM-MEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSAD----------------------- 390
Query: 192 AKSVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
AL+ FR M+ EN+ +EY F + +R+C+ L G+ +HGL+I+ GF
Sbjct: 391 ---------ALRFFRCMQS--ENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFA 439
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
+ + +LI Y D AM+ ++ + NS++ G G+ + +FN++
Sbjct: 440 SNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQM 499
Query: 311 TE----ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
E + I++ +I + G VD+ + M R I L ME +
Sbjct: 500 LELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPL--------RMEH----Y 547
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
I Y + +KA +L +M + + L AC G+++ + +HL++
Sbjct: 548 ACGIDLYGRAGQLDKAKELIDSM---PFEPDAMVWMTLLGACRVHGNMELASDVASHLLE 604
Query: 427 T-PFESNVYVGTSLVDMYSRCGSIND 451
P + + YV L +MYS G +D
Sbjct: 605 AEPRQHSTYV--LLSNMYSGLGMWSD 628
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 196/465 (42%), Gaps = 66/465 (14%)
Query: 153 WSLMLVGY-VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ +L Y V ++ A +F ++P+ D W L++ + S+ A +L R M E
Sbjct: 37 WNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHV-SIGAHPAACRLLRAMHER 95
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G N + S +R+ A +G G +H L +K G + AL+ Y C
Sbjct: 96 GL-AANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRD 154
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR----------------LTEANS 315
A R++D + + N+L+ G + G++ A +F LT N
Sbjct: 155 ACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVND 214
Query: 316 ----------------------ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
I N+ I Y+ G + +S+R+F+++ RS +
Sbjct: 215 STCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDEIGDRSDL------ 268
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT-MRKLAIDRTRSTFSVLFHACSCLG 412
++WN+M+ Y + + +A++ + + MR + +F+ + AC+
Sbjct: 269 ----------ISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHR 318
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS---INDAQASFSSISSPNVAAWTA 469
G ++H + K FE +V +L+ MY+R + DA F S+ + +W +
Sbjct: 319 D-HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNS 377
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
++ GYS HGL ++A+ F M ++I + F L +C L+ G +I + G
Sbjct: 378 MLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSG 437
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEA----EEFIKDMPIELDAVVWG 570
+ ++ + +SG L +A EE K + +++++G
Sbjct: 438 FASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFG 482
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 29/264 (10%)
Query: 318 YNSMIKGYAVYGQ-VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
+N ++ Y+V + ++RLF+++P + +WNS+++ +V
Sbjct: 37 WNQLLTAYSVSSPGLAAARRLFDEIP-----------------RLDAASWNSLLAAHVSI 79
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
H A +L M + + + + +G G LH+ VK NV+
Sbjct: 80 GAHPAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSA 139
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
T+L+ MY++CG DA F + N +W AL+ GY G + AV LF M + +
Sbjct: 140 TALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFL 199
Query: 497 PNAATFVGVLSACVRAGLVNEGM-----KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
P+ ATF +L+ +VN+ ++ + YG L + + G L
Sbjct: 200 PDEATFAALLT------VVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALA 253
Query: 552 EAEEFIKDMPIELDAVVWGALLSA 575
+ ++ D + W A+L A
Sbjct: 254 NSRRIFDEIGDRSDLISWNAMLGA 277
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 309/631 (48%), Gaps = 83/631 (13%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNETTFSTILSVCAQLNSLIDGKQIH 107
V SWN + GY + + L M +K + T+ +L C S G +
Sbjct: 122 VFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVL 181
Query: 108 CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
VLK G+EC FV + + +C E +S
Sbjct: 182 GHVLKFGFECDIFVHNASITMLLSCGE-------------------------------LS 210
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
A+DVF K +D+V W +I+G K E A+K+++ M E+ + PNE T +I +
Sbjct: 211 VAYDVFNKSRVRDLVTWNSMITGCVKRGLAIE-AIKIYKEM-EAEKVRPNEITMIGMISS 268
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
C+++ GK H + + G EF + AL++ Y C
Sbjct: 269 CSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKC--------------------- 307
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
G + A ++F+ + + +S+ +M+ GYA +G +D ++ + K+P +S+
Sbjct: 308 ----------GELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSV- 356
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
V WN++ISG VQ ++AL L+ M+ I+ + T A
Sbjct: 357 ----------------VPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSA 400
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CS LG+L G +H ++ + +V +GT+LVDMY++CG+I A F I N W
Sbjct: 401 CSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTW 460
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
TA++ G + HG +A+ F M+ IVP+ TF+GVLSAC GLV EG K F M S
Sbjct: 461 TAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSS 520
Query: 528 -YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+ V P L+HY+C+VDLLGR+GHL EAEE +K+MP+ DA V GAL AC + N+++GE
Sbjct: 521 KFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGE 580
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
R A K+ +D + YV+L+++Y+ W + RK + V+K PGCS +E+N V
Sbjct: 581 RTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIV 640
Query: 647 HAFSVEDRNNPNCNVIYATLEHLTANLNSVV 677
H F V D ++P IY L LT L+ +V
Sbjct: 641 HEFVVRDVSHPQSEWIYECLVTLTKQLDVIV 671
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 219/440 (49%), Gaps = 26/440 (5%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +IT G+L A ++F++ +R +V+WN+M+ G K E++ + M V+
Sbjct: 197 NASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVR 256
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
NE T ++S C+Q+ L GK+ HC + + G E + + L+ Y C E+ A+ +
Sbjct: 257 PNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVL 316
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD + + + W+ M++GY + + A ++ K+P+K VV W +ISG ++ G E A
Sbjct: 317 FDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKE-A 375
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
L LF M+ P++ T + + AC++LGA G +H + + D ++G AL++
Sbjct: 376 LALFHEMQIRTIE-PDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVD 434
Query: 262 FYCGCEAFDGAMRVYDRL-ENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSI 316
Y C A++V++ + + CL + ++I GL G +DA F+++ + I
Sbjct: 435 MYAKCGNIARALQVFEEIPQRNCLTWT-AVICGLALHGNAQDALSYFSKMIHIGIVPDEI 493
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
++ ++ G V++ ++ F +M ++ +V P+++ ++ M+ +
Sbjct: 494 TFLGVLSACCHGGLVEEGRKYFSEM--------SSKFNVSPKLKH----YSCMVDLLGRA 541
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYV 435
E+A +L M +A D + LF AC G++Q G+ L++ P +S YV
Sbjct: 542 GHLEEAEELVKNM-PMAAD--AAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYV 598
Query: 436 GTSLVDMYSRCGSINDAQAS 455
L MYS +A+++
Sbjct: 599 --LLASMYSEAKMWKEARSA 616
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 100/255 (39%), Gaps = 64/255 (25%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-------- 66
E I TN + + G+L+TAR LFD M +T+VSW TM+ GY+++ D
Sbjct: 291 EFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYK 350
Query: 67 -----------------------ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
E+L+L M ++ ++ T LS C+QL +L G
Sbjct: 351 IPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVG 410
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
IH + + +G+ L+ YA C I A +VF+E+ + N L W+ ++ G
Sbjct: 411 IWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALH 470
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
DA F KM +V P+E TF
Sbjct: 471 GNAQDALSYFSKMIHIGIV---------------------------------PDEITFLG 497
Query: 224 VIRACARLGAFCEGK 238
V+ AC G EG+
Sbjct: 498 VLSACCHGGLVEEGR 512
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 43/254 (16%)
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHAC-----SCLGS 413
E N +WN+ I GYV++ E LY M + T+ +L C SCLG
Sbjct: 119 ELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGL 178
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
G H++K FE +++V + + M CG ++ A F+ ++ W +++ G
Sbjct: 179 GVLG-----HVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITG 233
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV--- 530
GL EA+ +++ M + + PN T +G++S+C + +N G + +K +G+
Sbjct: 234 CVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFT 293
Query: 531 VP----------------------------TLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+P TL +T +V R G L A E + +P
Sbjct: 294 IPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIP- 352
Query: 563 ELDAVVWGALLSAC 576
E V W A++S C
Sbjct: 353 EKSVVPWNAIISGC 366
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 196/673 (29%), Positives = 327/673 (48%), Gaps = 57/673 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNETTFS 88
+ L AR+LFDQ+P R VSW ++ GY + E+L L S M +S ++++ S
Sbjct: 61 KTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLS 120
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
L C + + G +H +K G FVGS LL Y EI + +VFDE
Sbjct: 121 LGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDE---- 176
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
MP ++ V WT +I+G ++ E L F M
Sbjct: 177 ---------------------------MPTRNAVTWTAVITGLVRA-GYSEAGLAYFSGM 208
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
S + Y + ++A A GA G+ +H +K GF+ + + +L Y C
Sbjct: 209 GRSKVEY-DSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGK 267
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI----SYNSMIKG 324
D + + ++ + + +++ I MG+ + F R+ +N I +++++I
Sbjct: 268 LDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISC 327
Query: 325 YAVYGQVDDSKRLFEKMPHRSII-------SLNTMISVIPEME-----------RNPVTW 366
A + ++ ++L + + S+ T+ S E+ R+ +TW
Sbjct: 328 CANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITW 387
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+++I+ Y Q E+A + MR + + C + L+QG+ LHAH++
Sbjct: 388 STIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS 447
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
E V ++L+ MY++CGSI +A F ++ +WTA+++GY+ HG EA+ L
Sbjct: 448 VGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIEL 507
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLG 545
FE + + + P++ TF+GVL+AC AG+V+ G F SM K Y + P+ EHY C++DLL
Sbjct: 508 FENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLC 567
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G LH+AE I+ MPI+ D VVW LL AC +++ G+RAA ++ LD ++
Sbjct: 568 RAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHIT 627
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
L+NI+A GKW + +IR + V K+PG S +++ V AF DR++P IY
Sbjct: 628 LANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNI 687
Query: 666 LEHLTANLNSVVL 678
LE L + + +L
Sbjct: 688 LEELASGMEIYIL 700
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 198/439 (45%), Gaps = 28/439 (6%)
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
V+ N + DA D+F ++P++D V WT +ISGY S D E AL+LF MR E + +
Sbjct: 60 VKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSE-ALRLFSKMRLQSELRIDPFL 118
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
++ C + G +HG +K G +G AL++ Y + +V+D E
Sbjct: 119 LSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFD--E 176
Query: 281 NPCLNAS--NSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDS 334
P NA ++I GL+ G E F+ + E +S +Y +K A G ++
Sbjct: 177 MPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHG 236
Query: 335 KRLFEKMPHRSII-------SLNTMISVIPEMER-----------NPVTWNSMISGYVQN 376
+ + + + SL TM + +++ + V+W ++++ Y+Q
Sbjct: 237 RSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQM 296
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
+ LQ + MR + TFS + C+ L+ G+ LHAH++ F + + V
Sbjct: 297 GKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVA 356
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
S++ +YS+CG + F S+ ++ W+ ++ YS G G EA M +
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
PN VLS C ++ +G ++ + S G+ T + ++ + + G + EA +
Sbjct: 417 PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKI 476
Query: 557 IKDMPIELDAVVWGALLSA 575
D + D + W A++S
Sbjct: 477 FMD-SWKDDIISWTAMISG 494
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 160/425 (37%), Gaps = 84/425 (19%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N T + G+L + F +M VVSW T++ Y + K D L M SNV
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI 315
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
NE TFS ++S CA L G+Q+H VL G+ V + ++ Y+ C E+ +V
Sbjct: 316 PNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKV 375
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F + + + WS ++ Y Q GY E+A
Sbjct: 376 FCSMKFRDIITWSTIIAAYSQV--------------------------GYG------EEA 403
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+ MR G PNE+ SV+ C + +GK +H ++ G E + ALI
Sbjct: 404 FEYLSRMRSEGPK-PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALII 462
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
Y C G I +A IF + + IS+ +M
Sbjct: 463 MYAKC-------------------------------GSIAEASKIFMDSWKDDIISWTAM 491
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSI-------ISLNTMISVIPEMERNPVTWNSMISGYV 374
I GYA +G ++ LFE + + I + T S ++ +NSM Y
Sbjct: 492 ISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYH 551
Query: 375 QNNLHE----------KALQLY---MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
E +A +L+ +R + I +S L AC G + GQ
Sbjct: 552 ITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAA 611
Query: 422 AHLVK 426
A ++K
Sbjct: 612 AEVLK 616
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 28/309 (9%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+ +K + D++ LF+++P +R+ V+W ++ISGYV ++
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLP-----------------QRDEVSWTNIISGYVNSSD 95
Query: 379 HEKALQLYMTMR---KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
+AL+L+ MR +L ID S+ C + G LH VK ++V+V
Sbjct: 96 SSEALRLFSKMRLQSELRIDPF--LLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFV 153
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
G++L+DMY + G I + F + + N WTA++ G G + F M +
Sbjct: 154 GSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKV 213
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
++ + L A +G +N G I G + + + G L
Sbjct: 214 EYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLH 273
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP----ISAYVILSNIYA 611
+ M LD V W +++A + G +A ++M + P SA + +A
Sbjct: 274 TFRKMRT-LDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFA 332
Query: 612 VLGKWGKKM 620
L KWG+++
Sbjct: 333 RL-KWGEQL 340
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 197/637 (30%), Positives = 325/637 (51%), Gaps = 64/637 (10%)
Query: 68 SLSLVSTMHRSNVKLNET-TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
S S + + S KL++T T + ++ A+ L GKQ+H ++++ G F+ + L
Sbjct: 58 SFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFL 117
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
Y+ C E++ ++FD KM ++++V WT
Sbjct: 118 NLYSKCGELDYTIKLFD-------------------------------KMSQRNMVSWTS 146
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
+I+G+A + ++AL F MR GE + ++ SV++AC LGA G VH L++K
Sbjct: 147 IITGFAHN-SRFQEALSSFCQMRIEGE-IATQFALSSVLQACTSLGAIQFGTQVHCLVVK 204
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDA- 303
CGF + +G L + Y C A + ++ E PC +A S+I+G + G + A
Sbjct: 205 CGFGCELFVGSNLTDMYSKCGELSDACKAFE--EMPCKDAVLWTSMIDGFVKNGDFKKAL 262
Query: 304 ---------ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII--SLNTM 352
++ ++ +++S S +K + +G+ + L + + I +L M
Sbjct: 263 TAYMKMVTDDVFIDQHVLCSTLSACSALKA-SSFGKSLHATILKLGFEYETFIGNALTDM 321
Query: 353 ISVIPEMER------------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
S +M + V+ ++I GYV+ + EKAL ++ +R+ I+ T
Sbjct: 322 YSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFT 381
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
F+ L AC+ L+ G LH +VK F+ + +V ++LVDMY +CG + + F I
Sbjct: 382 FTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIE 441
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+P+ AW L+ +S HGLG A+ F M+ + + PNA TFV +L C AG+V +G+
Sbjct: 442 NPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLN 501
Query: 521 IFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
F SM K YGVVP EHY+CV+DLLGR+G L EAE+FI +MP E + W + L AC
Sbjct: 502 YFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIH 561
Query: 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSW 639
+ME + AA K+ L+ + A+V+LSNIYA +W +RK + + K PG SW
Sbjct: 562 GDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSW 621
Query: 640 IELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+++ ++ H F VED ++P IY L++L + +
Sbjct: 622 VDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRI 658
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 216/477 (45%), Gaps = 68/477 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G+L LFD+M R +VSW +++ G++ ++F E+LS M + S++L
Sbjct: 124 GELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVL 183
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C L ++ G Q+HCLV+K G+ C FVGS L Y+ C E+ +A + F+E+ + +
Sbjct: 184 QACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAV 243
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
LW+ M+ G+V+ A ++KM DV +
Sbjct: 244 LWTSMIDGFVKNGDFKKALTAYMKMVTDDVFI---------------------------- 275
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+++ S + AC+ L A GK +H ++K GFE++ IG AL + Y
Sbjct: 276 -----DQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVS 330
Query: 272 AMRVYDRLENPCLN--ASNSLINGLISMGRIEDAELIF----NRLTEANSISYNSMIKGY 325
A V+ ++ + C++ + ++I+G + M +IE A F R E N ++ S+IK
Sbjct: 331 ASNVF-QIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKAC 389
Query: 326 AVYGQVDDSKRL--------FEKMPHRSIISLNTM---------ISVIPEMERNP--VTW 366
A +++ +L F++ P S ++ I + E+E NP + W
Sbjct: 390 ANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIE-NPDEIAW 448
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N+++ + Q+ L A++ + M + TF L CS G ++ G + + K
Sbjct: 449 NTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEK 508
Query: 427 ----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
P E + + ++D+ R G + +A+ +++ PNV W + + HG
Sbjct: 509 IYGVVPKEEHY---SCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHG 562
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 10/242 (4%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITEC-GRNGQLVTARNLFD-QMPIRTVVSWNTMLCGYS 60
L+AT + ET I A+T+ ++G +V+A N+F ++VS ++ GY
Sbjct: 299 LHATILKLGFEYETFI---GNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYV 355
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ + +++LS + R ++ NE TF++++ CA L G Q+H V+K ++ F
Sbjct: 356 EMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPF 415
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP--- 177
V S L+ Y C + + ++FDE+ +E+ W+ ++ + Q L +A + F M
Sbjct: 416 VSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRG 475
Query: 178 -KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
K + V + L+ G + + E L F M + +P E + VI R G E
Sbjct: 476 LKPNAVTFVNLLKGCSHA-GMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKE 534
Query: 237 GK 238
+
Sbjct: 535 AE 536
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 196/632 (31%), Positives = 306/632 (48%), Gaps = 87/632 (13%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET-TFSTILSVCAQLNSLIDGKQIH 107
V SWN + GY + ++ L M R + + T+ + VCA + +I
Sbjct: 119 VFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEIL 178
Query: 108 CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
V++ G++ FV + ++ +C E+ A+++FDE C
Sbjct: 179 GHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDE-----------------SC---- 217
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE--NMPNEYTFDSVI 225
+D+V W +I+GY + C A + F + GE MP+E T V+
Sbjct: 218 ----------VRDLVSWNSIINGYVR----CGLADEAFDLYYKMGELNVMPDEVTMIGVV 263
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
A A+L G+ +H + + G + AL++ Y C+
Sbjct: 264 SASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCK------------------ 305
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
IE A+++F +T+ +S+ +M+ GYA +G ++ + RLF +MP
Sbjct: 306 -------------NIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMP--- 349
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
E++ V WN++I G+VQ ++AL L+ M+ ++ + T
Sbjct: 350 --------------EKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCL 395
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
ACS LG+L G +H ++ K NV +GT+LVDMY++CG+I A F + N
Sbjct: 396 SACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSL 455
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
WTA++ G + HG A+ F M+ +VP+ TF+GVLSAC GLV++G F M
Sbjct: 456 TWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQM 515
Query: 526 KS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
S YG+ P L+HY+C+VDLLGR+G L EAEE I+ MP E DAVVWGAL N+ +
Sbjct: 516 TSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHM 575
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
GERAA K+ LD YV+L+N+Y W + +RK + V+K PGCS IE+N
Sbjct: 576 GERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNG 635
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
V+ F + D+++P IY L LT + +
Sbjct: 636 LVYDFIIRDKSHPQSEKIYECLTRLTRQIEVI 667
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 222/507 (43%), Gaps = 90/507 (17%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G+L+ AR LFD+ +R +VSWN+++ GY + DE+ L M NV +E T ++
Sbjct: 204 GELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVV 263
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S AQL +L G+++H + + G + + L+ Y C IE AK +F+ + + +
Sbjct: 264 SASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVV 323
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M++GY + L+ A +F +MP+KDVV+W LI G+ ++ ++AL LF M+ S
Sbjct: 324 SWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQA-KRSKEALALFHEMQAS 382
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P++ T + + AC++LGA G +H + K + ++G AL++ Y C
Sbjct: 383 SV-APDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKC----- 436
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
G I+ A +F + NS+++ ++I G A++GQ
Sbjct: 437 --------------------------GNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQ- 469
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
PH +I + MIS+ G V + +
Sbjct: 470 ----------PHAAISYFSEMISI----------------GLVPDEI------------- 490
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQ-LLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
TF + AC G + QG+ + K + + LVD+ R G +
Sbjct: 491 --------TFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLE 542
Query: 451 DAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVGVL 506
+A+ S+ P+ W AL G HG +G A +LE D + +V +
Sbjct: 543 EAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAA---SKLLELD-PHDGGIYVLLA 598
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPT 533
+ A + + K+ + M+ GV T
Sbjct: 599 NMYGDANMWEQARKVRKMMEERGVEKT 625
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 144/337 (42%), Gaps = 69/337 (20%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
MT++T +VS + + G L +A LF++MP + VV WN ++ G+ + + E+L+L
Sbjct: 317 MTKKT-VVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALAL 375
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M S+V ++ T LS C+QL +L G +H V K +G+ L+ YA
Sbjct: 376 FHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAK 435
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C I++A +VF+E MP ++ + WT +I G
Sbjct: 436 CGNIKKAIQVFEE-------------------------------MPGRNSLTWTAIICGL 464
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
A A+ F M G +P+E TF V+ AC HG L+ G ++
Sbjct: 465 ALHGQP-HAAISYFSEMISIGL-VPDEITFIGVLSACC-----------HGGLVDQGRDY 511
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRL 310
FY + + P L + L++ L G +E+A ELI +
Sbjct: 512 ----------FYQMTSKYGIS---------PKLKHYSCLVDLLGRAGFLEEAEELIRSMP 552
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKR----LFEKMPH 343
E +++ + ++ G ++G V +R L E PH
Sbjct: 553 FEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPH 589
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 33/246 (13%)
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
N +WN I GYV++ A+ LY M RK + T+ +LF C+ +
Sbjct: 118 NVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEI 177
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H+++ F+S+++V +++ + CG + A+ F ++ +W +++NGY GL
Sbjct: 178 LGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLA 237
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV---VP----- 532
EA L+ M E +++P+ T +GV+SA + + G K+ +S++ G+ VP
Sbjct: 238 DEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANAL 297
Query: 533 -----------------------TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
T+ +T +V + G L A +MP E D V+W
Sbjct: 298 MDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMP-EKDVVLW 356
Query: 570 GALLSA 575
AL+
Sbjct: 357 NALIGG 362
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 187/641 (29%), Positives = 333/641 (51%), Gaps = 64/641 (9%)
Query: 44 MPI-----RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLN 98
MPI R + ++L ++ A+ +++S + ++ + ++L +++L C
Sbjct: 1 MPISNPRKRPICVARSLLSRHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTK 60
Query: 99 SLIDGKQIHCLVLKSGYE-CFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
SL GK IH + +G++ + + L+ Y C + +A +VFD++H N W+ M+
Sbjct: 61 SLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMV 120
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENMP 216
G+V+ ++ A VF MP++DVV W ++ GYA+ DG +AL F+ +R SG
Sbjct: 121 SGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQ--DGNLHEALWFFKELRRSGIKF- 177
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
NE++F ++ AC + + HG ++ GF + + ++I+ Y C
Sbjct: 178 NEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKC---------- 227
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
G++E A+ F+ +T + + ++I GYA G ++ + +
Sbjct: 228 ---------------------GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADK 266
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
LF +MP E+NPV+W ++I+GYV+ + AL L+ M + +
Sbjct: 267 LFREMP-----------------EKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKP 309
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ TFS A + + SL+ G+ +H ++++T N V +SL+DMYS+ GS+ ++ F
Sbjct: 310 EQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASERVF 369
Query: 457 S-SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
+ W +++ + HGLG +A+ + + M++ + PN T V +L+AC +GLV
Sbjct: 370 RICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTLVVILNACSHSGLV 429
Query: 516 NEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
EG++ F SM +G+VP EHY C++DLLGR+G E I++MP E D +W A+L
Sbjct: 430 EEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSKIEEMPFEPDKHIWNAILG 489
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
C N E+G++AA+++ LD + + Y++LS+IYA GKW +R + V K+
Sbjct: 490 VCRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYADHGKWELVEKLRGIMKKRRVNKE 549
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNV----IYATLEHLTA 671
SWIE+ ++V AF+V D ++ + + IY L +L A
Sbjct: 550 KAVSWIEIENKVKAFTVSDGSHAHAHARKEEIYFILHNLAA 590
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 172/332 (51%), Gaps = 13/332 (3%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N ++ ++G LV AR +FD MP R VVSWNTM+ GY++ E+L + R
Sbjct: 113 LYSWNNMVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRR 172
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S +K NE +F+ +L+ C + L +Q H VL +G+ + ++ YA C ++E
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AKR FDE+ + +W+ ++ GY + M A +F +MP+K+ V WT LI+GY + G
Sbjct: 233 AKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSG 292
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+ AL LFR M + P ++TF S + A A + + GK +HG +I+ + +
Sbjct: 293 -DLALDLFRKMI-AMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTS 350
Query: 258 ALIEFYCGCEAFDGAMRV----YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE- 312
+LI+ Y + + + RV YD+ + C+ N++I+ L G A + + + +
Sbjct: 351 SLIDMYSKSGSLEASERVFRICYDKQD--CV-LWNTMISALAQHGLGHKALQMLDDMIKF 407
Query: 313 ---ANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
N + ++ + G V++ R FE M
Sbjct: 408 RVHPNRTTLVVILNACSHSGLVEEGVRWFESM 439
>gi|226531155|ref|NP_001148193.1| methyltransferase small domain [Zea mays]
gi|195616632|gb|ACG30146.1| methyltransferase small domain [Zea mays]
Length = 656
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 324/627 (51%), Gaps = 60/627 (9%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N + R G L A+ L ++MP R VS+ T++ +++ ++++ +M N
Sbjct: 80 NSILAALTRAGHLDRAQGLLEEMPRIHRDAVSYTTLVTAFARAGHAARAVAVFRSMLSEN 139
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V NE T + ++ A+ + IH L+ + F V + L+ YA E+ A+
Sbjct: 140 VVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSAR 199
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+FD + N + W++ML GYV+ ++ A +VF ++P++D V W LI GY D
Sbjct: 200 ALFDGMTHRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDGYI-CADLIS 258
Query: 200 KALKLFRWMRESGENMPNEYT--FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
A+K + M GE N+Y +++ACAR A EG+ +H +++K GF+ +
Sbjct: 259 DAMKAYVQM--VGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDALAFVQA 316
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRLTEANSI 316
L+ FY GC G ++ RL + AS N+L+ L+ G I +A +F+ + E +++
Sbjct: 317 TLVHFY-GCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTV 375
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S+++MI GY G+ D + +LF M LNT I E N VT S +S +
Sbjct: 376 SWSTMISGYVQTGRSDMALKLFYSM-------LNTSI------EPNEVTLASALSAIADS 422
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
G+L QG+ +H +++ P + +
Sbjct: 423 -----------------------------------GTLDQGKWIHDYIMNRPVQLTDNLS 447
Query: 437 TSLVDMYSRCGSINDAQASFSSISS--PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+ L+DMY++CGSI DA F+ ++ +V+ W A++ + HG ++ LF +
Sbjct: 448 SGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTS 507
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
I PN+ TF+GVLSAC AG V +G F SM + YG+ PT++HY C+VDLLGR+G+L EA
Sbjct: 508 IKPNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEA 567
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
E+ + MP++ D V+WG++LSA N+ +GERAA+++ LD+ ++ + LSNIYA
Sbjct: 568 EQLVSMMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADA 627
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWI 640
G W +RK L +++ G S I
Sbjct: 628 GHWTNVSVVRKELQDANLERLTGRSGI 654
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
++ ++ S N + RNG + AR LFD MP R VSW+TM+ GY + + D +L L
Sbjct: 337 LSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKL 396
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+M ++++ NE T ++ LS A +L GK IH ++ + + + SGL+ YA
Sbjct: 397 FYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAK 456
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C I +A + F+ ++ D F + + ++ + I GY
Sbjct: 457 CGSIADAVQFFNRVN------------------------DKFSSVSPWNAMICSLAIHGY 492
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
A +L LF ++ + PN TF V+ AC G +GK
Sbjct: 493 A------HMSLDLFSQLQRTSIK-PNSITFIGVLSACCHAGTVTKGK 532
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 44/174 (25%)
Query: 414 LQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGS---------------INDAQASFS 457
L+ G+ LHA K+ SNV+V S++ YSR S + DA A S
Sbjct: 22 LRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETPPPLRDATARNS 81
Query: 458 SISS-----------------PNV----AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+++ P + ++T L+ ++ G + AV +F ML +++V
Sbjct: 82 ILAALTRAGHLDRAQGLLEEMPRIHRDAVSYTTLVTAFARAGHAARAVAVFRSMLSENVV 141
Query: 497 PNAATFVGVLSACVRAGL-----VNEGMKIFRSMKSYGVVPT--LEHYTCVVDL 543
PN AT G ++A R G + G + R++ + +V T + Y V++L
Sbjct: 142 PNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLEL 195
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 298/538 (55%), Gaps = 31/538 (5%)
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVI 225
+ A+ VF KMP++++V WT +I+ +A+ GC + A+ LF M SG +P+ +T+ SV+
Sbjct: 2 APAYKVFDKMPERNLVTWTLMITRFAQL--GCARDAIDLFLDMELSG-YVPDRFTYSSVL 58
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA---FDGAMRVYDRLENP 282
AC LG GK +H +I+ G D +G +L++ Y C A D + +V++++
Sbjct: 59 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 118
Query: 283 CLNASNSLINGLISMGRIE-DAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRL 337
+ + ++I G + +A +F ++ N S++S++K +++
Sbjct: 119 NVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 178
Query: 338 FEKMPHRSIISLN----TMISVIPE--------------MERNPVTWNSMISGYVQNNLH 379
+ I S+N ++IS+ E+N V++N+++ GY +N
Sbjct: 179 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 238
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
E+A L+ + I + TF+ L + +G++ +G+ +H L+K ++SN + +L
Sbjct: 239 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 298
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+ MYSRCG+I A F+ + NV +WT+++ G++ HG + A+ +F MLE PN
Sbjct: 299 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 358
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
T+V VLSAC G+++EG K F SM K +G+VP +EHY C+VDLLGRSG L EA EFI
Sbjct: 359 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFIN 418
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
MP+ DA+VW LL AC N E+G AA+ + + +AY++LSN++A G+W
Sbjct: 419 SMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKD 478
Query: 619 KMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ IRK + + K+ GCSWIE+ +RVH F V + ++P IY L+ L + + +
Sbjct: 479 VVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEM 536
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/529 (23%), Positives = 241/529 (45%), Gaps = 74/529 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +FD+MP R +V+W M+ +++ +++ L M S + T+S++LS C +
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF---EIEEAKRVFDELHEDNELLW 153
L L GKQ+H V++ G VG L+ YA C ++++++VF+++ E N + W
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++ Y Q + K+ + ++ K+ISG+ +
Sbjct: 124 TAIITAYAQSG----------ECDKEAIELFCKMISGHIR-------------------- 153
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
PN ++F SV++AC L G+ V+ +K G +G +LI Y + A
Sbjct: 154 --PNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 211
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYG 329
+ +D L L + N++++G + E+A L+FN + + ++ ++ S++ G A G
Sbjct: 212 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 271
Query: 330 QVDDSKRLFEKMPHRSIIS----LNTMIS-------------VIPEME-RNPVTWNSMIS 371
+ +++ ++ S N +IS V EME RN ++W SMI+
Sbjct: 272 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 331
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ-----LLHAHLVK 426
G+ ++ +AL+++ M + T+ + ACS +G + +GQ + H +
Sbjct: 332 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIV 391
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSE 482
E +VD+ R G + +A +S+ + W L+ HG LG
Sbjct: 392 PRMEHY----ACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRH 447
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
A E++LEQ+ + A ++ + + AG + +KI +SMK ++
Sbjct: 448 AA---EMILEQE-PDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 492
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 207/447 (46%), Gaps = 60/447 (13%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-ESLSLVSTMHRSNVKLNE 84
+C +G + +R +F+QMP V+SW ++ Y++ + D E++ L M +++ N
Sbjct: 97 AKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNH 156
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
+FS++L C L+ G+Q++ +K G VG+ L+ YA +E+A++ FD
Sbjct: 157 FSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDI 216
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
L E K++V + ++ GYAK++ E+A L
Sbjct: 217 LFE-------------------------------KNLVSYNAIVDGYAKNLKS-EEAFLL 244
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F + ++G + + +TF S++ A +GA +G+ +HG L+K G++ ++ I ALI Y
Sbjct: 245 FNEIADTGIGI-SAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNS 320
C + A +V++ +E+ + + S+I G G A +F+++ T+ N I+Y +
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
++ + G + + ++ F M ++P ME + M+ ++ L
Sbjct: 364 VLSACSHVGMISEGQKHFNSMYKEH--------GIVPRMEH----YACMVDLLGRSGLLV 411
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH---LVKTPFESNVYVGT 437
+A++ +M +A + L AC G+ + G+ HA L + P + Y+
Sbjct: 412 EAMEFINSMPLMA---DALVWRTLLGACRVHGNTELGR--HAAEMILEQEPDDPAAYI-- 464
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNV 464
L ++++ G D S+ N+
Sbjct: 465 LLSNLHASAGQWKDVVKIRKSMKERNL 491
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 114/217 (52%), Gaps = 33/217 (15%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ R+G++ AR FD + + +VS+N ++ GY+K K +E+ L + + + +
Sbjct: 195 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 254
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ TF+++LS A + ++ G+QIH +LK GY+ + + + L+ Y+ C IE A +V
Sbjct: 255 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 314
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F+E+ + N + W+ M+ G+ + G+A +A
Sbjct: 315 FNEMEDRNVISWTSMITGFAK--------------------------HGFAT------RA 342
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
L++F M E+G PNE T+ +V+ AC+ +G EG+
Sbjct: 343 LEMFHKMLETGTK-PNEITYVAVLSACSHVGMISEGQ 378
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ R G + A +F++M R V+SW +M+ G++K +L + M + K
Sbjct: 296 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 355
Query: 82 LNETTFSTILSVCAQLNSLIDGKQ 105
NE T+ +LS C+ + + +G++
Sbjct: 356 PNEITYVAVLSACSHVGMISEGQK 379
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 298/538 (55%), Gaps = 31/538 (5%)
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVI 225
+ A+ VF KMP++++V WT +I+ +A+ GC + A+ LF M SG +P+ +T+ SV+
Sbjct: 7 APAYKVFDKMPERNLVTWTLMITRFAQL--GCARDAIDLFLDMELSG-YVPDRFTYSSVL 63
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA---FDGAMRVYDRLENP 282
AC LG GK +H +I+ G D +G +L++ Y C A D + +V++++
Sbjct: 64 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 123
Query: 283 CLNASNSLINGLISMGRIE-DAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRL 337
+ + ++I G + +A +F ++ N S++S++K +++
Sbjct: 124 NVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 183
Query: 338 FEKMPHRSIISL----NTMISVIPE--------------MERNPVTWNSMISGYVQNNLH 379
+ I S+ N++IS+ E+N V++N+++ GY +N
Sbjct: 184 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 243
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
E+A L+ + I + TF+ L + +G++ +G+ +H L+K ++SN + +L
Sbjct: 244 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 303
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+ MYSRCG+I A F+ + NV +WT+++ G++ HG + A+ +F MLE PN
Sbjct: 304 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 363
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
T+V VLSAC G+++EG K F SM K +G+VP +EHY C+VDLLGRSG L EA EFI
Sbjct: 364 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFIN 423
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
MP+ DA+VW LL AC N E+G AA+ + + +AY++LSN++A G+W
Sbjct: 424 SMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKD 483
Query: 619 KMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ IRK + + K+ GCSWIE+ +RVH F V + ++P IY L+ L + + +
Sbjct: 484 VVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEM 541
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/529 (23%), Positives = 241/529 (45%), Gaps = 74/529 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +FD+MP R +V+W M+ +++ +++ L M S + T+S++LS C +
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF---EIEEAKRVFDELHEDNELLW 153
L L GKQ+H V++ G VG L+ YA C ++++++VF+++ E N + W
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++ Y Q + K+ + ++ K+ISG+ +
Sbjct: 129 TAIITAYAQSG----------ECDKEAIELFCKMISGHIR-------------------- 158
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
PN ++F SV++AC L G+ V+ +K G +G +LI Y + A
Sbjct: 159 --PNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 216
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYG 329
+ +D L L + N++++G + E+A L+FN + + ++ ++ S++ G A G
Sbjct: 217 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 276
Query: 330 QVDDSKRLFEKMPHRSIIS----LNTMIS-------------VIPEME-RNPVTWNSMIS 371
+ +++ ++ S N +IS V EME RN ++W SMI+
Sbjct: 277 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 336
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ-----LLHAHLVK 426
G+ ++ +AL+++ M + T+ + ACS +G + +GQ + H +
Sbjct: 337 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIV 396
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSE 482
E +VD+ R G + +A +S+ + W L+ HG LG
Sbjct: 397 PRMEHY----ACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRH 452
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
A E++LEQ+ + A ++ + + AG + +KI +SMK ++
Sbjct: 453 AA---EMILEQE-PDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 497
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 207/447 (46%), Gaps = 60/447 (13%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-ESLSLVSTMHRSNVKLNE 84
+C +G + +R +F+QMP V+SW ++ Y++ + D E++ L M +++ N
Sbjct: 102 AKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNH 161
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
+FS++L C L+ G+Q++ +K G VG+ L+ YA +E+A++ FD
Sbjct: 162 FSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDI 221
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
L E K++V + ++ GYAK++ E+A L
Sbjct: 222 LFE-------------------------------KNLVSYNAIVDGYAKNLKS-EEAFLL 249
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F + ++G + + +TF S++ A +GA +G+ +HG L+K G++ ++ I ALI Y
Sbjct: 250 FNEIADTGIGI-SAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 308
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNS 320
C + A +V++ +E+ + + S+I G G A +F+++ T+ N I+Y +
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 368
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
++ + G + + ++ F M ++P ME + M+ ++ L
Sbjct: 369 VLSACSHVGMISEGQKHFNSMYKEH--------GIVPRMEH----YACMVDLLGRSGLLV 416
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH---LVKTPFESNVYVGT 437
+A++ +M +A + L AC G+ + G+ HA L + P + Y+
Sbjct: 417 EAMEFINSMPLMA---DALVWRTLLGACRVHGNTELGR--HAAEMILEQEPDDPAAYI-- 469
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNV 464
L ++++ G D S+ N+
Sbjct: 470 LLSNLHASAGQWKDVVKIRKSMKERNL 496
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 114/217 (52%), Gaps = 33/217 (15%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ R+G++ AR FD + + +VS+N ++ GY+K K +E+ L + + + +
Sbjct: 200 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 259
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ TF+++LS A + ++ G+QIH +LK GY+ + + + L+ Y+ C IE A +V
Sbjct: 260 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 319
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F+E+ + N + W+ M+ G+ + G+A +A
Sbjct: 320 FNEMEDRNVISWTSMITGFAK--------------------------HGFAT------RA 347
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
L++F M E+G PNE T+ +V+ AC+ +G EG+
Sbjct: 348 LEMFHKMLETGTK-PNEITYVAVLSACSHVGMISEGQ 383
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ R G + A +F++M R V+SW +M+ G++K +L + M + K
Sbjct: 301 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 360
Query: 82 LNETTFSTILSVCAQLNSLIDGKQ 105
NE T+ +LS C+ + + +G++
Sbjct: 361 PNEITYVAVLSACSHVGMISEGQK 384
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 194/619 (31%), Positives = 322/619 (52%), Gaps = 62/619 (10%)
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
ST ++ +L++ T +L+ + SL KQ+H + L++G+ +V L+ YAN
Sbjct: 17 STENKFTSQLSQKTILDLLNTKSS-TSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANP 75
Query: 133 F--EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
+ A +VF+ + N ++++++ G +Q N P K + + K++
Sbjct: 76 HFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNN-----------EPCKAICCYYKMMIA 124
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
+A+ PN++T+ ++ +AC A EG VH +IK G
Sbjct: 125 HAR----------------------PNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLS 162
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
D I A I+ Y +GA R+ N + N++I+G + G +E A+ +F +
Sbjct: 163 GDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSM 222
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
+ N S+N M+ G A G +++++ LF +M E+N ++W++MI
Sbjct: 223 EDKNVGSWNVMVSGMAKCGMIEEARELFNEMK-----------------EKNEISWSAMI 265
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
GY++ +++AL+++ M++ I + S + AC+ LG+L QG+ +HA++
Sbjct: 266 DGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNS 325
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+ +GT+LVDMY++CG ++ A F + V W A++ G HG +A+ LF M
Sbjct: 326 FDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKM 385
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGH 549
+Q PN T +GVLSAC +G+V+EG++IF SM+ YG+ P +EHY CVVDLLGR+G
Sbjct: 386 QKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGL 445
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
L EAEE + MP+E A VWGALL AC ++E+GER + + L+ + Y +LSNI
Sbjct: 446 LGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNI 505
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
YA G+W ++RK + VK G S I+ + VH F + D ++P IY L+++
Sbjct: 506 YARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNM 565
Query: 670 TANLN--------SVVLFD 680
L S VLFD
Sbjct: 566 IKRLKMEGFSPNTSQVLFD 584
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 208/451 (46%), Gaps = 55/451 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +F+ +P V +N ++ G + + +++ M ++ + N+ T+ T+ C
Sbjct: 83 ALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTA 142
Query: 97 LNSLIDGKQIHCLVLKSG--------------YECF-----------EFVGSGLLFF--- 128
+ +G Q+H V+K G Y F E S ++ F
Sbjct: 143 AEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAM 202
Query: 129 ---YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
Y C E+E AK +F + + N W++M+ G +C ++ +A ++F +M +K+ + W+
Sbjct: 203 IDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWS 262
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
+I GY K ++AL++F M+ E P ++ SV+ ACA LGA +G+ +H +
Sbjct: 263 AMIDGYIKG-GYYKEALEVFNVMQRE-EIRPRKFVLSSVLAACANLGALDQGRWIHAYVN 320
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
FD +G AL++ Y C D A V++++E + N++I GL GR EDA
Sbjct: 321 NNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIE 380
Query: 306 IFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
+F ++ + N I+ ++ A G VD+ R+F S+ + + P ME
Sbjct: 381 LFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFN--------SMEEVYGIEPGMEH 432
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ ++ + L +A ++ M + ++ + + + L AC G ++ G+ +
Sbjct: 433 ----YGCVVDLLGRAGLLGEAEEV---MYSMPMEPSAAVWGALLGACRKHGDVELGERVG 485
Query: 422 AHLVK-TPFESNVYVGTSLVDMYSRCGSIND 451
L++ P S Y L ++Y+R G +D
Sbjct: 486 KILLELEPQNSGRY--ALLSNIYARAGRWDD 514
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 142/344 (41%), Gaps = 39/344 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N ++ + G + AR LF++M + +SW+ M+ GY K + E+L + + M R
Sbjct: 227 VGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQR 286
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ + S++L+ CA L +L G+ IH V + +G+ L+ YA C ++
Sbjct: 287 EEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDM 346
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A VF+++ + W+ M+ G DA ++F KM K+
Sbjct: 347 AWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQK----------------- 389
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIG 256
FR PN T V+ ACA G EG ++ + + G E
Sbjct: 390 -------FR---------PNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHY 433
Query: 257 GALIEFYCGCEAFDGAMRV-YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE--- 312
G +++ A V Y P +L+ G +E E + L E
Sbjct: 434 GCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEP 493
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
NS Y + YA G+ DD + + M R + + +T IS+I
Sbjct: 494 QNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKT-STGISMI 536
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 201/687 (29%), Positives = 354/687 (51%), Gaps = 67/687 (9%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N + G+ +L A+++FD+M +R ++W T++ G+ + + + M+ +
Sbjct: 117 NNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEE 176
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
NE T S IL C L +L+ G+QIH V+K G++ FVG+ L+ Y+ C ++ A++V
Sbjct: 177 FNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKV 236
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EK 200
+ L KDV +IS Y K+ GC EK
Sbjct: 237 YSNL-------------------------------AYKDVRCLNFMISEYGKA--GCGEK 263
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
A+ +F + SG PN+YTF +VI AC +V+HG+ IKCG + S+G A++
Sbjct: 264 AIGVFLHLLGSGLE-PNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIV 322
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---------- 310
Y + A + + + L + +L++G + G + A F+++
Sbjct: 323 SVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSC 382
Query: 311 ---------TEANSISYNSMIKGYAV-YGQVDDSK------RLFEKMPHRSIISLNTMIS 354
+E ++ I G+ V G V D L+ K R + S +
Sbjct: 383 CFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKC--RKLRSARLVFH 440
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+ +++N V++N+++SGY+ + E A+ L+ +R I TF+ L + L
Sbjct: 441 SL--LDKNIVSFNAILSGYIGAD-EEDAMALFSQLRLADIKPDSVTFARLLSLSADQACL 497
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+G+ LHA+++KT FE+N VG +++ MY++CGSI DA F S++ + +W A+++ Y
Sbjct: 498 VKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAY 557
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPT 533
+ HG G +A++LFE M +++ VP+ T + VL AC +GL+ EG +F M+S YG+ P
Sbjct: 558 ALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPE 617
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
+EH+ C+VDLLGR+G+L EA FI P ++W L+ C ++ G+ A++ +
Sbjct: 618 IEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLL 677
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
L + +Y+++SN+YA G + +R + L+V K+ G SWIE++++VH F D
Sbjct: 678 DLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWIEIDNKVHQFVASD 737
Query: 654 RNNPNCNVIYATLEHLTANLNSVVLFD 680
+++P IYA L+ L + + ++++
Sbjct: 738 KDHPESKEIYAKLDLLKSEMKQNMIYN 764
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/537 (25%), Positives = 240/537 (44%), Gaps = 75/537 (13%)
Query: 74 TMHRSNVKLNETT--------FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
T H S V N + + +L + L+ G+ IH + K GY+ F G+ L
Sbjct: 60 TTHSSMVYCNSDSDQNPLFNDWPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNL 119
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
+ Y ++ +A+ VFDE+ N + W+ ++ G++Q N DV
Sbjct: 120 VNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVN------DV------------- 160
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
E ++ R M GE NE+T +++AC L G+ +HG +I
Sbjct: 161 -------------ESVFRIAREMYWVGEEF-NEHTCSVILQACDSLENLVRGEQIHGFVI 206
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
K GF+ D +G +LI Y C A +VY L + N +I+ G E A
Sbjct: 207 KRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIG 266
Query: 306 IFNRL----TEANSISYNSMIKGYAVYGQVD-DSKRLFEKMPHR-----------SIISL 349
+F L E N ++ ++I A G +D + R+ M + +I+S+
Sbjct: 267 VFLHLLGSGLEPNDYTFTNVIS--ACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSV 324
Query: 350 NTMISVIPEM--------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
++ E ERN V+W +++SGYV+N +KAL+ + + +L + F
Sbjct: 325 YVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCF 384
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
+ L CS +L G +H +VK + +V VGT+L+D+Y++C + A+ F S+
Sbjct: 385 ATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLD 444
Query: 462 PNVAAWTALMNGYSHHGLGS---EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
N+ ++ A+++GY +G+ +A+ LF + DI P++ TF +LS + +G
Sbjct: 445 KNIVSFNAILSGY----IGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKG 500
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + G V+ + + G + +A + M LD++ W A++SA
Sbjct: 501 KCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNY-LDSISWNAVISA 556
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 203/730 (27%), Positives = 333/730 (45%), Gaps = 99/730 (13%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N +T G A +L MP VVSWN +L GY + F + + L M R
Sbjct: 98 VSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARC 157
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
V + TT + +L C L+ L G QIH L +K+G E GS L+ Y C +E+A
Sbjct: 158 GVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDA 217
Query: 139 KRVFDELHEDNELLWSLMLVG--------------------------------------- 159
F + E N + W ++ G
Sbjct: 218 LHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCKAITCLSTARQLHAHAIKNKFS 277
Query: 160 ------------YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
Y + + + DA F +P V ++ G ++ G E A++LF++
Sbjct: 278 SDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAE-AMQLFQF 336
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M SG + V ACA + GF+ D + A+++ Y C+
Sbjct: 337 MTRSGIGF-GVVSLSGVFSACAEVK---------------GFDVDVCVRNAILDLYGKCK 380
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK 323
A A V+ +E + N++I L ED + N + EA+ +Y S++K
Sbjct: 381 ALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLK 440
Query: 324 ----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------ERNPVT 365
G V+G+ S + +++ + +I E + V+
Sbjct: 441 ACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVS 500
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WNS+I+G+ N E+A + + M + + T++ + +C+ L +++ G+ +H ++
Sbjct: 501 WNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQII 560
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K + ++ ++LVDMY++CG++ D+Q F + + +W A++ GY+ HG G EA+
Sbjct: 561 KQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALE 620
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLL 544
+FE + ++ PN ATFV VL AC GL+++G + F M S Y + P LEH+ C+
Sbjct: 621 MFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEHFACMGP-- 678
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
EA +FI+ MP+E DAV+W LLS C ++EV E AA + LD S Y+
Sbjct: 679 ------QEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYI 732
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+LSN+YA GKW R+ + +KK+PGCSWIE+ S +H F V ++ +P +Y
Sbjct: 733 LLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLVGEKVHPRSREVYE 792
Query: 665 TLEHLTANLN 674
L +L +
Sbjct: 793 MLNNLICEMK 802
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 126/546 (23%), Positives = 224/546 (41%), Gaps = 85/546 (15%)
Query: 82 LNETTFSTILSVCAQL--NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
L TFS + +CA ++L G+ H +L SG+ FV + LL YA C A
Sbjct: 27 LATATFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAH 86
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VFD + + + W+ ML Y A + MP DVV W L+SGY C+
Sbjct: 87 GVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGY------CQ 140
Query: 200 KALKLFRWMRESGENM------PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ +FR + M P+ T +++AC L G +H L +K G E D
Sbjct: 141 RG--MFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDV 198
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI------------------ 295
G AL++ Y C + + A+ + + + ++I G +
Sbjct: 199 RAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCKAI 258
Query: 296 ---SMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
S R A I N+ + ++ + +++ YA + D++R F +P+ ++
Sbjct: 259 TCLSTARQLHAHAIKNKFS-SDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTV------ 311
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
T N+M+ G V+ L +A+QL+ M + I + S +F AC+ +
Sbjct: 312 -----------ETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVK 360
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
F+ +V V +++D+Y +C ++ +A F + + +W ++
Sbjct: 361 G---------------FDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIA 405
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC-----VRAGLVNEGMKIFRSMKS 527
+ + ++ ML + + T+ VL AC + GLV G I +
Sbjct: 406 ALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGL 465
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
V + VVD+ + G + EA + + D + V W ++++ F +N + E
Sbjct: 466 DAFVSST-----VVDMYCKCGMITEALK-LHDRIGGQELVSWNSIIAG--FSLNKQSEE- 516
Query: 588 AAQKMF 593
AQK F
Sbjct: 517 -AQKFF 521
>gi|357438957|ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478803|gb|AES60006.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 891
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 182/563 (32%), Positives = 321/563 (57%), Gaps = 37/563 (6%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM-PKKDVVVWTKLISGYA 192
++ EA++VFDE+ + + LW+ M+ GY++C L+++A +F + +K V+VWT ++SGY
Sbjct: 60 KVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSGYI 119
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
K ++ E+A +LF M + N +++++I AR G E + G + +
Sbjct: 120 K-MNRIEEAERLFNEM-----PVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSW 173
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
++ AL C D A R+++ + + + +++ GL GR++ A +F+++
Sbjct: 174 NTVMTALAH----CGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPI 229
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS----------------VI 356
N +S+N+MI GYA G+ D++ +LFE+MP R + S NTM++ +
Sbjct: 230 RNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAM 289
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR-KLAIDRTRSTFSVLFHACSCLGSLQ 415
P+ +N +TW +M++GYVQ+ L E+AL+L+ M+ + T TF + ACS L L
Sbjct: 290 PQ--KNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLP 347
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP--NVAAWTALMNG 473
+GQ +H + KT F+ + YV ++L++MYS+CG + A+ F S ++ AW ++
Sbjct: 348 EGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAA 407
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVP 532
Y+HHG G+EA+ LF M E N T+VG+L+AC AGL +EG K F + K+ +
Sbjct: 408 YAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQV 467
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+HYTC++DL GR+G L EA I+ + E+ +WGALL+ C N ++G+ A K+
Sbjct: 468 REDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNADIGKLVADKV 527
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
++ + Y++ SN+YA +G + ++R ++ +KK PGCSWI++ + V F V
Sbjct: 528 LKMEPENADTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPGCSWIDVGNTVQVFVVN 587
Query: 653 DRNNPNCNVIYATLEHLTANLNS 675
D+++ + L++L +L++
Sbjct: 588 DKSHSQ----FEMLKYLLLDLHT 606
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 211/445 (47%), Gaps = 39/445 (8%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS N I RNG+ A +LF +MP R VVSWNT++ + + D++ L + M
Sbjct: 139 VVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRE 198
Query: 78 SNVKLNETTFSTILSVCAQLNS---LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
+V ++ TT LS ++++ + D I +V + ++ YA
Sbjct: 199 RDV-VSWTTMVAGLSKNGRVDAAREVFDKMPIRNVV----------SWNAMIAGYAQNGR 247
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+EA ++F+ + E + W+ M+ G++Q ++ A +F MP+K+V+ WT +++GY +
Sbjct: 248 FDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQH 307
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
E+ALKLF M+ + P TF +V+ AC+ L EG+ +H ++ K F+
Sbjct: 308 -GLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTY 366
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLN--ASNSLINGLISMGRIEDAELIFNRLTE 312
+ ALI Y C F A +++D + ++ A N +I G +A +FN++ E
Sbjct: 367 VVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQE 426
Query: 313 ----ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
AN ++Y ++ + G D+ + F+++ N I V + +
Sbjct: 427 LGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLK------NRYIQVRED------HYTC 474
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-T 427
+I + ++AL + + L + + S + L CS G+ G+L+ ++K
Sbjct: 475 LIDLCGRAGRLDEALNI---IEGLGKEVSLSLWGALLAGCSVHGNADIGKLVADKVLKME 531
Query: 428 PFESNVYVGTSLVDMYSRCGSINDA 452
P ++ Y+ S +MY+ G +A
Sbjct: 532 PENADTYLLAS--NMYASVGMREEA 554
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 214/500 (42%), Gaps = 84/500 (16%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A LF++MP+R VVSWNTM+ GY++ + E+L L M NV +++T+++ A
Sbjct: 127 AERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNV----VSWNTVMTALAH 182
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
C I++A+R+F+E+ E + + W+ M
Sbjct: 183 -----------------------------------CGRIDDAERLFNEMRERDVVSWTTM 207
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ G + + A +VF KMP ++VV W +I+GYA++ ++ALKLF M E +MP
Sbjct: 208 VAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQN-GRFDEALKLFERMPE--RDMP 264
Query: 217 NEYTF-------DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+ T + RA A + V+ + G+ + ++ + +A
Sbjct: 265 SWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGY-VQHGLSEEALKLFNKMQAN 323
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGY 325
DG P +++ + + + + I ++ + ++ +++I Y
Sbjct: 324 DGL--------KPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMY 375
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
+ G +K++F+ L+ + +I WN MI+ Y + +A+ L
Sbjct: 376 SKCGDFHVAKKMFDD-------GLSGHMDLI--------AWNGMIAAYAHHGYGNEAINL 420
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF---ESNVYVGTSLVDM 442
+ M++L T+ L ACS G +G L+K + + Y T L+D+
Sbjct: 421 FNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVREDHY--TCLIDL 478
Query: 443 YSRCGSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
R G +++A + +++ W AL+ G S HG L+ + +L+ + NA T
Sbjct: 479 CGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNADIGKLVADKVLKME-PENADT 537
Query: 502 FVGVLSACVRAGLVNEGMKI 521
++ + G+ E +
Sbjct: 538 YLLASNMYASVGMREEAANV 557
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 152/360 (42%), Gaps = 73/360 (20%)
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM-PHRSI 346
N I+ L G++ +A +F+ +++ +S + +MI GY G ++++++LF++ +S+
Sbjct: 49 NYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSV 108
Query: 347 ISLNTMIS------VIPEME--------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
I M+S I E E RN V+WN+MI GY +N ++AL L+ M +
Sbjct: 109 IVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPER 168
Query: 393 AIDRTRSTFSVLFH----------------------ACSCLGSLQQGQLLHAHLV--KTP 428
+ + + L H G + G++ A V K P
Sbjct: 169 NVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMP 228
Query: 429 FESNVYVGTSLVDMYSRCG-------------------------------SINDAQASFS 457
NV +++ Y++ G +N A+ F
Sbjct: 229 IR-NVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFH 287
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD-IVPNAATFVGVLSACVRAGLVN 516
++ NV WTA+M GY HGL EA+ LF M D + P TFV VL AC +
Sbjct: 288 AMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLP 347
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD-MPIELDAVVWGALLSA 575
EG +I + + + + ++++ + G H A++ D + +D + W +++A
Sbjct: 348 EGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAA 407
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 196/684 (28%), Positives = 330/684 (48%), Gaps = 97/684 (14%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGY-- 59
+ +A +T M + S AI L AR +FD++P +WNT++ Y
Sbjct: 49 QTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYAS 108
Query: 60 ------SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS 113
S WA D +VS+ S N+ TF ++ A+++SL G+ +H + +KS
Sbjct: 109 GPDPVCSIWAFLD----MVSS--ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKS 162
Query: 114 GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
FV + L+ Y +C +++ A +VF + E + + W+ M+ G+VQ A ++F
Sbjct: 163 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 222
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
KM +DV + T V+ ACA++
Sbjct: 223 KKMESEDVKA---------------------------------SHVTMVGVLSACAKIRD 249
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
G+ V + + + ++ A+++ Y C + + A R++D +E
Sbjct: 250 LEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME------------- 296
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
E +++++ +M+ GYA+ + ++ + MP + I
Sbjct: 297 ------------------EKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDI------- 331
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR-KLAIDRTRSTFSVLFHACSCLG 412
V WN++IS Y QN +AL ++ ++ + I + T AC+ +G
Sbjct: 332 ----------VAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVG 381
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+L+ G+ +H+++ K + N YV ++L+ MYS+CG + A+ F+S+ +V W+A++
Sbjct: 382 ALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIG 441
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVV 531
G + HG GSEAV +F M E ++ PN TF V AC GLV+E +F M+ SYG+V
Sbjct: 442 GLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIV 501
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P +HY C+VD+LGRSG+L +A +FI+ MPI VWGALL AC N+ + E A +
Sbjct: 502 PEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTR 561
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+ L+ + A+V+LSNIYA GKW ++RK + +KK+PGCS IE++ +H F
Sbjct: 562 LLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLS 621
Query: 652 EDRNNPNCNVIYATLEHLTANLNS 675
D +P +Y L + L S
Sbjct: 622 GDNAHPMSEKVYGKLHEVMEKLKS 645
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 88/235 (37%), Gaps = 50/235 (21%)
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL--VDMYSRCGSINDA 452
+R+R T S L CS L L+Q HAH+++T S+ Y + L + S S+ A
Sbjct: 29 ERSRHTIS-LIDRCSSLRQLKQ---THAHMIRTGMFSDPYSASKLFAIAALSSFASLEYA 84
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML--EQDIVPNAATFVGVLSACV 510
+ F I PN W L+ Y+ ++ F M+ E PN TF ++ A
Sbjct: 85 RKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAA 144
Query: 511 RA-----------------------------------GLVNEGMKIFRSMKSYGVVPTLE 535
G ++ K+F ++K VV
Sbjct: 145 EVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS--- 201
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMP---IELDAVVWGALLSACWFWMNMEVGER 587
+ +++ + G +A E K M ++ V +LSAC ++E G R
Sbjct: 202 -WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRR 255
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 196/621 (31%), Positives = 318/621 (51%), Gaps = 66/621 (10%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
N TT L A +L GK+IH +L +G+ + L+ Y+ C ++ A +F
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF 95
Query: 143 -DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
D HE N ++ ++ G++ + F+ + KM + V+
Sbjct: 96 SDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVI------------------- 136
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
P+++TF I+AC + E K +HGLL K G E D IG AL+
Sbjct: 137 --------------PDKFTFPCAIKACLDV---LEIKKIHGLLFKFGLELDVFIGSALVN 179
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
Y + A ++ L + N+++NG +G+ E F R+ + + +
Sbjct: 180 CYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFT 239
Query: 322 IKG----YAVYGQVDDSKRLFE---KMPHRSIISL-NTMISV------------IPEM-- 359
+ G +AV G +++ + + KM + S +++ N++I + I EM
Sbjct: 240 VTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR 299
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
E++ +WNS++S + Q H+ L+L M I T + + ACS L +L G+
Sbjct: 300 EKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGRE 359
Query: 420 LHAHLVKTPFE------SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
+H +++ + +V + +++DMY++CGS+ DA F +S+ +VA+W ++ G
Sbjct: 360 IHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMG 419
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVP 532
Y HG G+EA+ +F M E + P+ TFVGVLSAC AG V++G MKS Y V P
Sbjct: 420 YGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAP 479
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
T+EHYTCV+D+LGR+G L EA E MPIE + VVW ALL+AC + + E AAQ++
Sbjct: 480 TIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRV 539
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
F L+ + +YV++SN+Y +G++ + +++R + V+K PGCSWIEL + VH F
Sbjct: 540 FELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSA 599
Query: 653 DRNNPNCNVIYATLEHLTANL 673
DR +P + IYA L LTA L
Sbjct: 600 DRAHPEAHSIYAGLNSLTARL 620
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 139/311 (44%), Gaps = 60/311 (19%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A+ F+++PIR VV WN M+ GY++ +F+ L M+ +V + T + +L
Sbjct: 185 GLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVL 244
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
SV A + L +G+ IH +K GY+ V + L+ Y C IE+A +F+ + E
Sbjct: 245 SVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMRE---- 300
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
KD+ W ++S + + D + L+L M +
Sbjct: 301 ---------------------------KDIFSWNSIVSVHEQCGDH-DGTLRLLDRMLGA 332
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD-ESIGGALIEFYCGCEAFD 270
G P+ T +V+ AC+ L A G+ +HG +I G D + I L++
Sbjct: 333 GIQ-PDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLK--------- 382
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
N++I+ G + DA L+F R++ + S+N MI GY ++G
Sbjct: 383 -----------------NAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGY 425
Query: 331 VDDSKRLFEKM 341
+++ +F +M
Sbjct: 426 GNEALEMFSRM 436
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 184/453 (40%), Gaps = 66/453 (14%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHC 108
V ++N ++ G+ +E M V ++ TF + C + ++ K+IH
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDV---LEIKKIHG 160
Query: 109 LVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD 168
L+ K G E F+GS L+ Y +E A+ F+EL + +LW+ M+ GY Q
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
+ F +M + VV P+ +T V+
Sbjct: 221 VLETFRRMNDESVV---------------------------------PSRFTVTGVLSVF 247
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A +G G+++HG +K G++ ++ +LI+ Y C+ + A+ +++ + + + N
Sbjct: 248 AVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWN 307
Query: 289 SLINGLISMGRIEDAELIFNRLTEAN-------------------SISYNSMIKGYA-VY 328
S+++ G + + +R+ A ++ + I GY V
Sbjct: 308 SIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVS 367
Query: 329 GQVDDSKRLFEKMPHRSII-------SLNTMISVIPEMERNPV-TWNSMISGYVQNNLHE 380
G D K + + + ++I S+ V M V +WN MI GY +
Sbjct: 368 GLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGN 427
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ-LLHAHLVKTPFESNVYVGTSL 439
+AL+++ M ++ + TF + ACS G + QG+ L K + T +
Sbjct: 428 EALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCV 487
Query: 440 VDMYSRCGSINDA-QASFSSISSPNVAAWTALM 471
+DM R G +++A + + + N W AL+
Sbjct: 488 IDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 149/337 (44%), Gaps = 64/337 (18%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M ++ + +N I G+ + A +F+ M + + SWN+++ + + D +L L
Sbjct: 266 MGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRL 325
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ M + ++ + T +T+L C+ L +L+ G++IH ++ SG
Sbjct: 326 LDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLG--------------- 370
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
++ K + D+ LL + ++ Y +C M DA VF +M KDV W +I GY
Sbjct: 371 ----KDGKDI------DDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGY 420
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
G E AL++F M E + P+E TF V+ AC+ G +G+ L++ ++
Sbjct: 421 GMHGYGNE-ALEMFSRMCEV-QLKPDEVTFVGVLSACSHAGFVSQGR---NFLVQMKSKY 475
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRL 310
D + P + +I+ L G++++A EL
Sbjct: 476 DVA---------------------------PTIEHYTCVIDMLGRAGQLDEAYELALTMP 508
Query: 311 TEANSISYNSMIKG-----YAVYGQVDDSKRLFEKMP 342
EAN + + +++ +AV +V ++R+FE P
Sbjct: 509 IEANPVVWRALLAACRLHKHAVLAEV-AAQRVFELEP 544
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 99/193 (51%), Gaps = 14/193 (7%)
Query: 393 AIDRTRSTFSVLFHACSCLGSLQ---------QGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+I +F ++ +C+ SLQ +G+ +H++++ F ++ TSL++MY
Sbjct: 23 SISTAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMY 82
Query: 444 SRCGSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
S+C +N A + FS + NV A+ A+++G+ +G E ++ M + ++P+ TF
Sbjct: 83 SKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTF 142
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+ AC+ V E KI + +G+ + + +V+ + G + A+ +++PI
Sbjct: 143 PCAIKACLD---VLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI 199
Query: 563 ELDAVVWGALLSA 575
D V+W A+++
Sbjct: 200 R-DVVLWNAMVNG 211
>gi|325260825|gb|ADZ04643.1| hypothetical protein [Oryza punctata]
Length = 674
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 204/648 (31%), Positives = 320/648 (49%), Gaps = 52/648 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T GR G+L A+ LFDQMP R V+SW +L Y+ + + M R N
Sbjct: 42 NALLTAYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 82 ---------------------------LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG 114
N ++ I+S A+ L + + ++ + +
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAGMLREAELVYEEMPQ-- 159
Query: 115 YECFEFVGS-GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
+ + VGS L+ Y E+ A RVF+ + + + WS M+ G + +S+A VF
Sbjct: 160 -QWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVF 218
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
MP++ VV WT +I GY K C L LF MR G + N T V+ ACA
Sbjct: 219 DAMPERSVVSWTSMIRGYVKR-GMCSDGLLLFLNMRREGVQV-NATTLSVVLDACAGASL 276
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
EG +H L+I GFE D +G ++I Y A R ++ ++ + + NSLI G
Sbjct: 277 AREGIQIHNLIISMGFELDIFLGDSVIIMYSRFGWMADAQRAFNCMQQKDIVSWNSLITG 336
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+ +E+A ++F + + +++S+ SM+ G+A G + +S LFE+MP + +
Sbjct: 337 YVQHDMVEEAHVLFKLMPQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDV------- 389
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
V W ++IS ++ N + A++ + M + TFS L A + L
Sbjct: 390 ----------VAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTITFSCLLSALASLAM 439
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L QG+ HA+ + + + V TSL+ MY++CG + +A FSSIS+P++ A +++
Sbjct: 440 LNQGRQAHAYSINMGWVFDSAVHTSLISMYAKCGRLAEAHHVFSSISNPSLIAINSMITA 499
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVP 532
+ HG +A+ LF M PN TF+G+L+ C RAG V +G F SM+ YGV P
Sbjct: 500 FVQHGFAEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEP 559
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
EHYTC+VDLLGR+G L EA E I MP + W ALLSA N+ + AAQK+
Sbjct: 560 NPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKL 619
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWI 640
D +AY +LS +++ G ++M +L+++ K+ PG S I
Sbjct: 620 LEKDPYDATAYTVLSKMFSSAGMEYEEMQKVVQLSNMASKR-PGYSLI 666
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 217/464 (46%), Gaps = 51/464 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S + + ++G + AR +FD MP R+VVSW +M+ GY K + L L M R
Sbjct: 195 VISWSAMVDGLCKHGSVSEARRVFDAMPERSVVSWTSMIRGYVKRGMCSDGLLLFLNMRR 254
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V++N TT S +L CA + +G QIH L++ G+E F+G ++ Y+ + +
Sbjct: 255 EGVQVNATTLSVVLDACAGASLAREGIQIHNLIISMGFELDIFLGDSVIIMYSRFGWMAD 314
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA----- 192
A+R F+ + + + + W+ ++ GYVQ +++ +A +F MP+KD V WT ++ G+A
Sbjct: 315 AQRAFNCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMPQKDAVSWTSMVVGFANRGWM 374
Query: 193 -KSVDGCEKA---------------------LKLFRWM-RESGEN-MPNEYTFDSVIRAC 228
+SV+ E+ L RW R S E PN TF ++ A
Sbjct: 375 RESVELFEQMPVKDVVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTITFSCLLSAL 434
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A L +G+ H I G+ FD ++ +LI Y C A V+ + NP L A N
Sbjct: 435 ASLAMLNQGRQAHAYSINMGWVFDSAVHTSLISMYAKCGRLAEAHHVFSSISNPSLIAIN 494
Query: 289 SLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
S+I + G EDA +F ++ A N +++ ++ G A G V FE M R
Sbjct: 495 SMITAFVQHGFAEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESM--R 552
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+ + E NP + M+ + L +AL++ +M + + ++ L
Sbjct: 553 PVYGV----------EPNPEHYTCMVDLLGRAGLLAEALEMINSMPQ---NDHSDAWAAL 599
Query: 405 FHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRCG 447
A S +L ++ L+ K P+++ Y T L M+S G
Sbjct: 600 LSASSLHSNLAFAKIAAQKLLEKDPYDATAY--TVLSKMFSSAG 641
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 102/259 (39%), Gaps = 36/259 (13%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
Q+ IVS N IT ++ + A LF MP + VSW +M+ G++ ES+ L
Sbjct: 323 QQKDIVSWNSLITGYVQHDMVEEAHVLFKLMPQKDAVSWTSMVVGFANRGWMRESVELFE 382
Query: 74 TMHRSNV-------------------------------KLNETTFSTILSVCAQLNSLID 102
M +V K N TFS +LS A L L
Sbjct: 383 QMPVKDVVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTITFSCLLSALASLAMLNQ 442
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
G+Q H + G+ V + L+ YA C + EA VF + + + + M+ +VQ
Sbjct: 443 GRQAHAYSINMGWVFDSAVHTSLISMYAKCGRLAEAHHVFSSISNPSLIAINSMITAFVQ 502
Query: 163 CNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
DA +F KM K + V + +++G A++ ++ F MR PN
Sbjct: 503 HGFAEDALKLFTKMQNAGYKPNHVTFLGILTGCARA-GFVQQGYNYFESMRPVYGVEPNP 561
Query: 219 YTFDSVIRACARLGAFCEG 237
+ ++ R G E
Sbjct: 562 EHYTCMVDLLGRAGLLAEA 580
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 211/713 (29%), Positives = 354/713 (49%), Gaps = 94/713 (13%)
Query: 22 NKAITECGRNGQLVT---ARNLF--DQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
NK I + G L + ARN F D + ++ +N ++ GY+ D+++ L M
Sbjct: 63 NKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQML 122
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ ++ TF +LS C+++ +L +G Q+H VLK G E FV + L+ FYA C +++
Sbjct: 123 VMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVD 182
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+++FD + E N + W+ ++ GY +L +A +F +M + V
Sbjct: 183 LGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGV--------------- 227
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
PN T VI ACA+L GK V + + G E +
Sbjct: 228 ------------------EPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMV 269
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN------------------------ 292
AL++ Y C A +++D N L N++++
Sbjct: 270 NALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPR 329
Query: 293 ----------------GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
G +S+G+ A ++ N L ++IS N++I Y G+ + + +
Sbjct: 330 PDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNIS-NAIIDMYMKCGKREAACK 388
Query: 337 LFEKMPHRSIISLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQNNLHEKA 382
+FE MP++++++ N++I+ + EM ER+ V+WN+MI VQ ++ E+A
Sbjct: 389 VFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEA 448
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
++L+ M+ I R T + AC LG+L + + ++ K ++ +GT+LVDM
Sbjct: 449 IELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDM 508
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
+SRCG + A F + +V+AWTA + + G A+ LF MLEQ + P+ F
Sbjct: 509 FSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVF 568
Query: 503 VGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
V +L+AC G V++G ++F SM K++G+ P + HY C+VDLLGR+G L EA + I+ MP
Sbjct: 569 VALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMP 628
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
IE + VVWG+LL+AC N+E+ AA+K+ L + + +V+LSNIYA GKW
Sbjct: 629 IEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVAR 688
Query: 622 IRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+R ++ V+K PG S IE+ +H F+ D ++ I LE + L+
Sbjct: 689 VRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLS 741
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 139/600 (23%), Positives = 256/600 (42%), Gaps = 71/600 (11%)
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
F S LV + + + S +L C L L KQ+HC ++K G C + S
Sbjct: 6 FPSSTLLVPASLKEANPITRNSSSKLLVNCKTLKEL---KQLHCDMMKKGLLCHK-PASN 61
Query: 125 LLFFYANCFEI---EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
L A+ +I E + +D+ + SL +
Sbjct: 62 LNKLIASSVQIGTLESLDYARNAFGDDDGNMASLFM------------------------ 97
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
+ LI GYA + G ++A+ L+ M G +P++YTF ++ AC+++ A EG VH
Sbjct: 98 --YNCLIRGYASAGLG-DQAILLYVQMLVMG-IVPDKYTFPFLLSACSKILALSEGVQVH 153
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
G ++K G E D + +LI FY C D +++D + + + SLING +
Sbjct: 154 GAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSK 213
Query: 302 DAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
+A +F ++ EA N ++ +I A ++ K++ + + M++ +
Sbjct: 214 EAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALV 273
Query: 358 EM------------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+M +N V +N+++S YV + L + M + +
Sbjct: 274 DMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKV 333
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T AC+ LG L G+ HA++++ E + +++DMY +CG A F +
Sbjct: 334 TMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHM 393
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+ V W +L+ G G A +F+ MLE+D+V + T +G L V+ + E +
Sbjct: 394 PNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLV-SWNTMIGAL---VQVSMFEEAI 449
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE---EFIKDMPIELDAVVWGALLSAC 576
++FR M++ G+ + G G L A+ +I+ I +D + AL+
Sbjct: 450 ELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVD-- 507
Query: 577 WFWMNMEVGE-RAAQKMFG-LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
M G+ +A +F ++K+ +SA+ + A+ G +++ + +VK D
Sbjct: 508 ---MFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPD 564
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 195/630 (30%), Positives = 305/630 (48%), Gaps = 87/630 (13%)
Query: 51 SWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET-TFSTILSVCAQLNSLIDGKQIHCL 109
SWN + GY + ++ L M R + + T+ + VCA + +I
Sbjct: 121 SWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGH 180
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
V++ G++ FV + ++ +C E+ A+++FDE C
Sbjct: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDE-----------------SC------ 217
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE--NMPNEYTFDSVIRA 227
+D+V W +I+GY + C A + F + GE MP+E T V+ A
Sbjct: 218 --------VRDLVSWNSIINGYVR----CGLADEAFDLYYKMGELNVMPDEVTMIGVVSA 265
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
A+L G+ +H + + G + AL++ Y C+
Sbjct: 266 SAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCK-------------------- 305
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
IE A+++F +T+ +S+ +M+ GYA +G ++ + RLF +MP
Sbjct: 306 -----------NIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMP----- 349
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
E++ V WN++I G+VQ ++AL L+ M+ ++ + T A
Sbjct: 350 ------------EKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSA 397
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CS LG+L G +H ++ K NV +GT+LVDMY++CG+I A F + N W
Sbjct: 398 CSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTW 457
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
TA++ G + HG A+ F M+ +VP+ TF+GVLSAC GLV++G F M S
Sbjct: 458 TAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTS 517
Query: 528 -YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
YG+ P L+HY+C+VDLLGR+G L EAEE I+ MP E DAVVWGAL N+ +GE
Sbjct: 518 KYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGE 577
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
RAA K+ LD YV+L+N+Y W + +RK + V+K PGCS IE+N V
Sbjct: 578 RAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLV 637
Query: 647 HAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ F + D+++P IY L LT + +
Sbjct: 638 YDFIIRDKSHPQSEKIYECLTRLTRQIEVI 667
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 222/507 (43%), Gaps = 90/507 (17%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G+L+ AR LFD+ +R +VSWN+++ GY + DE+ L M NV +E T ++
Sbjct: 204 GELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVV 263
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S AQL +L G+++H + + G + + L+ Y C IE AK +F+ + + +
Sbjct: 264 SASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVV 323
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M++GY + L+ A +F +MP+KDVV+W LI G+ ++ ++AL LF M+ S
Sbjct: 324 SWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQA-KRSKEALALFHEMQAS 382
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P++ T + + AC++LGA G +H + K + ++G AL++ Y C
Sbjct: 383 SV-APDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKC----- 436
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
G I+ A +F + NS+++ ++I G A++GQ
Sbjct: 437 --------------------------GNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQ- 469
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
PH +I + MIS+ G V + +
Sbjct: 470 ----------PHAAISYFSEMISI----------------GLVPDEI------------- 490
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQ-LLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
TF + AC G + QG+ + K + + LVD+ R G +
Sbjct: 491 --------TFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLE 542
Query: 451 DAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVGVL 506
+A+ S+ P+ W AL G HG +G A +LE D + +V +
Sbjct: 543 EAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAA---SKLLELD-PHDGGIYVLLA 598
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPT 533
+ A + + K+ + M+ GV T
Sbjct: 599 NMYGDANMWEQARKVRKMMEERGVEKT 625
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 144/337 (42%), Gaps = 69/337 (20%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
MT++T +VS + + G L +A LF++MP + VV WN ++ G+ + + E+L+L
Sbjct: 317 MTKKT-VVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALAL 375
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M S+V ++ T LS C+QL +L G +H V K +G+ L+ YA
Sbjct: 376 FHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAK 435
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C I++A +VF+E MP ++ + WT +I G
Sbjct: 436 CGNIKKAIQVFEE-------------------------------MPGRNSLTWTAIICGL 464
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
A A+ F M G +P+E TF V+ AC HG L+ G ++
Sbjct: 465 ALHGQP-HAAISYFSEMISIGL-VPDEITFIGVLSACC-----------HGGLVDQGRDY 511
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRL 310
FY + + P L + L++ L G +E+A ELI +
Sbjct: 512 ----------FYQMTSKYGIS---------PKLKHYSCLVDLLGRAGFLEEAEELIRSMP 552
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKR----LFEKMPH 343
E +++ + ++ G ++G V +R L E PH
Sbjct: 553 FEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPH 589
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 33/246 (13%)
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
N +WN I GYV++ A+ LY M RK + T+ +LF C+ +
Sbjct: 118 NXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEI 177
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H+++ F+S+++V +++ + CG + A+ F ++ +W +++NGY GL
Sbjct: 178 LGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLA 237
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV---VP----- 532
EA L+ M E +++P+ T +GV+SA + + G K+ +S++ G+ VP
Sbjct: 238 DEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANAL 297
Query: 533 -----------------------TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
T+ +T +V + G L A +MP E D V+W
Sbjct: 298 MDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMP-EKDVVLW 356
Query: 570 GALLSA 575
AL+
Sbjct: 357 NALIGG 362
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/641 (29%), Positives = 319/641 (49%), Gaps = 79/641 (12%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFST 89
+G L AR+LFD++P + +W ++ +K + E++ + H++ V+ ++ +
Sbjct: 24 SGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLS 83
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+ CA L +++ K++H ++ G+ +G+ L+ Y C E A+ VF+
Sbjct: 84 VAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFE------ 137
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
MP +DV+ WT + S Y + +AL FR M
Sbjct: 138 -------------------------GMPFRDVISWTSMASCYV-NCGLLREALGAFRKMG 171
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+GE PN T S++ AC L G+ VHG +++ G + + AL+ Y C +
Sbjct: 172 LNGER-PNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLS- 229
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
I A+L+F+ ++ +++S+N +I Y +
Sbjct: 230 ------------------------------IRQAQLVFDSMSRRDTVSWNVLITAYFLNK 259
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
+ + +F +M + N +WN++I G +QN EKAL++ M
Sbjct: 260 ECEKGLSVFGRMMSEGV-------------GLNYASWNAVIGGCMQNGRTEKALEVLSRM 306
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+ + T + + AC+ L SL+ G+ +H ++ + F ++ T+LV MY++CG +
Sbjct: 307 QNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDL 366
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
++ FS ++ + +W ++ S HG G EA+LLF M++ + PN+ TF GVLS C
Sbjct: 367 ELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGC 426
Query: 510 VRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
+ LV+EG+ IF SM + + V P +H++C+VD+L R+G L EA EFIK MPIE A
Sbjct: 427 SHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGA 486
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
WGALL C + N+E+G AA ++F ++ YV+LSNI W + + RK +
Sbjct: 487 WGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRD 546
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
V K+PGCSWI++ +RVH F V D++N + IY L+++
Sbjct: 547 RGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYM 587
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 118/263 (44%), Gaps = 21/263 (7%)
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK 381
IK Y+ G + ++ LF+K+P P++ TW +IS ++ +
Sbjct: 18 IKVYSNSGDLQRARHLFDKIPQ-------------PDLP----TWTILISALTKHGRSLE 60
Query: 382 ALQLYMTMR-KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
A+Q Y R K ++ + + AC+ L + + +H ++ F S+V +G +L+
Sbjct: 61 AIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALI 120
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
DMY +C A+ F + +V +WT++ + Y + GL EA+ F M PN+
Sbjct: 121 DMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSV 180
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
T +L AC + G ++ + G+ + + +V++ + +A+ M
Sbjct: 181 TVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSM 240
Query: 561 PIELDAVVWGALLSACWFWMNME 583
D V W L++A +++N E
Sbjct: 241 S-RRDTVSWNVLITA--YFLNKE 260
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 2/152 (1%)
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
L K P ++ + +YS G + A+ F I P++ WT L++ + HG EA
Sbjct: 2 LSKLPTSLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEA 61
Query: 484 VLLFEIMLEQDIV-PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
+ + ++ V P+ + V AC V ++ +G + ++D
Sbjct: 62 IQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALID 121
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+ G+ A + MP D + W ++ S
Sbjct: 122 MYGKCRCSEGARLVFEGMPFR-DVISWTSMAS 152
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 298/555 (53%), Gaps = 34/555 (6%)
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLF 205
E+N L + + Y C LMS A +F + K+ +W +I GYA +G K+L L+
Sbjct: 92 ENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYAS--NGLPMKSLVLY 149
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
R M G+ N +T+ V++AC L G+ VH ++ CG E D +G +L+ Y
Sbjct: 150 REMLCFGQRADN-FTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAK 208
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA------------ 313
A V+DR+ L + N++I+G A L+F+ + +A
Sbjct: 209 FGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGL 268
Query: 314 -------NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER----N 362
++ +I GYAV + + + F + N M+ ER +
Sbjct: 269 LSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKD 328
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT---RSTFSVLFHACSCLGSLQQGQL 419
V+WNSMI GY +N ++L+L+ R++A+D + + TF + AC + +L+ G
Sbjct: 329 TVSWNSMILGYARNGDAFESLRLF---RRMALDGSGPDQVTFIAVLGACDQIAALRYGMS 385
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+H++LVK F++N VGT+LVDMYS+CGS+ ++ F + ++ +W+A++ GY HG
Sbjct: 386 IHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGR 445
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYT 538
G EA+ + + M ++P+ F +LSAC AGLV EG +IF M K Y V P L HY+
Sbjct: 446 GREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYS 505
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
C+VDLLGR+GHL EA I+ M I+ + +W ALL+A N+++ E +AQK+F ++ K
Sbjct: 506 CMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPK 565
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
+S+Y+ LSNIYA +W +R + +KK PGCS+IEL++ VH F V D+++
Sbjct: 566 VVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQ 625
Query: 659 CNVIYATLEHLTANL 673
IYA L L L
Sbjct: 626 TEDIYAKLNELKQQL 640
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 165/333 (49%), Gaps = 40/333 (12%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ I N + + G + TAR +FD+M R + SWNTM+ GY+K A + +
Sbjct: 193 ESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDL 252
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF-EFVGSGLLFFYANCF 133
M ++ + + TT +LS CA L ++ +GK IH +++ + +F + L+ Y NC
Sbjct: 253 MGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCN 312
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+ +A+R+F+ + + + W+ M++GY + DAF+
Sbjct: 313 CMVDARRLFERVRWKDTVSWNSMILGYAR---NGDAFE---------------------- 347
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+L+LFR M G P++ TF +V+ AC ++ A G +H L+K GF+ +
Sbjct: 348 -------SLRLFRRMALDGSG-PDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANT 399
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
+G AL++ Y C + + RV+D + + L + ++++ G GR +A I + + +A
Sbjct: 400 IVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGM-KA 458
Query: 314 NSI-----SYNSMIKGYAVYGQVDDSKRLFEKM 341
NS+ + S++ + G V + K +F KM
Sbjct: 459 NSVIPDNGVFTSILSACSHAGLVVEGKEIFYKM 491
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 198/491 (40%), Gaps = 98/491 (19%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A +FD + ++ WN M+ GY+ +SL L M + + T+ +L
Sbjct: 109 GLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVL 168
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C L + G+++H V+ G E +VG+ LL YA ++ A+ VFD + E +
Sbjct: 169 KACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLT 228
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY + AF VF M K + C L L
Sbjct: 229 SWNTMISGYAKNADSGTAFLVFDLMGKAGLFA-------------DCTTLLGL------- 268
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF-EFDESIGGALIEFYCGCEAFD 270
+ ACA L A EGKV+HG ++ +++ +LIE YC C
Sbjct: 269 -------------LSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMV 315
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT------------------- 311
A R+++R+ + NS+I G G ++ +F R+
Sbjct: 316 DARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACD 375
Query: 312 --------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
+AN+I +++ Y+ G + S+R+F++MP +S++S
Sbjct: 376 QIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVS--- 432
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
W++M++GY + +A+ + M+ ++ F+ + ACS
Sbjct: 433 --------------WSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHA 478
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTS----LVDMYSRCGSINDAQASFSSIS-SPNVAA 466
G + +G+ + + K E NV S +VD+ R G +++A ++ P
Sbjct: 479 GLVVEGKEIFYKMEK---EYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDI 535
Query: 467 WTALMNGYSHH 477
W AL+ H
Sbjct: 536 WAALLTASRLH 546
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 143/338 (42%), Gaps = 56/338 (16%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
+V AR LF+++ + VSWN+M+ GY++ ESL L M ++ TF +L
Sbjct: 314 MVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGA 373
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
C Q+ +L G IH ++K G++ VG+ L+ Y+ C + ++RVFDE+ + + + W
Sbjct: 374 CDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSW 433
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
S M+ GY +A + M V+
Sbjct: 434 SAMVAGYGLHGRGREAISILDGMKANSVI------------------------------- 462
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+ F S++ AC+ G EGK + + E + ++ AL + C + A
Sbjct: 463 --PDNGVFTSILSACSHAGLVVEGKEIFYKM-----EKEYNVKPALSHYSCMVDLLGRAG 515
Query: 274 RV---YDRLENPCLNASNSLINGLISMGR----IEDAELIFNRLTEANS---ISYNSMIK 323
+ Y + + ++ + L++ R I+ AE+ ++ + N SY +
Sbjct: 516 HLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSN 575
Query: 324 GYAVYGQVDDSKRL--------FEKMPHRSIISLNTMI 353
YA + DD +R+ +K P S I L+ M+
Sbjct: 576 IYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMV 613
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 201/624 (32%), Positives = 302/624 (48%), Gaps = 84/624 (13%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMH--RSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
V WNTM+ + L+ M R+ ++ N TF +L + +G+++
Sbjct: 54 VFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEV 113
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H V+++G+ C EFV LL FY V C L+
Sbjct: 114 HASVVRTGFACSEFVSGALLGFY-------------------------------VACGLV 142
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
VF +M + +V+WT +I Y V EKAL+LFR MRE G P+ +V+
Sbjct: 143 GKGRQVFDEMRQPGLVLWTLIIRAYV-CVTFPEKALELFRTMREVGLT-PDMVAISTVVS 200
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
AC LG K +H + K G E D + LI Y C + D A R + E P
Sbjct: 201 ACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQ--ETPM--- 255
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
N + +N+MI + ++ K+LF+ MP R +
Sbjct: 256 --------------------------KNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDV 289
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
+S WNSMI G+ + +++AL + M + T
Sbjct: 290 VS-----------------WNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLS 332
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
AC+ G+L G +HA++ K + + +SL+DMYS+CG I+ A F + ++
Sbjct: 333 ACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFT 392
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM- 525
WT+++ G + HG G +A+ F M E + P+ T VGVLSAC AGL+++G F+SM
Sbjct: 393 WTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSME 452
Query: 526 KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
K +G+VP +EHY C+VDLLGR G L EA + I MP+E + ++WGA LSAC N+E+G
Sbjct: 453 KVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELG 512
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
E AA+++ GLD + A V+LSN+YA KW + M +RK + +KK PGCS IE+N
Sbjct: 513 EVAARRLLGLDPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGS 572
Query: 646 VHAFSVEDRNNPNCNVIYATLEHL 669
VH F V D ++P I + +E +
Sbjct: 573 VHGFLVGDNSHPCYTEINSMVEKI 596
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 150/318 (47%), Gaps = 9/318 (2%)
Query: 28 CGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTF 87
CG G+ R +FD+M +V W ++ Y +++L L TM + +
Sbjct: 139 CGLVGK---GRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAI 195
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
ST++S C L L K +HC + KSG E FV S L+ Y C ++ A R F E
Sbjct: 196 STVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPM 255
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
N ++W+ M+ V+ N + +F MP +DVV W +I G+A+ + ++AL F
Sbjct: 256 KNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFAR-IGQYQEALTWFHE 314
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M SG + PN T S + ACA GA G +H + K D S+ +LI+ Y C
Sbjct: 315 MEFSGVS-PNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCG 373
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIK 323
D A+++++ L S++ GL GR E A F+++ EA + ++ ++
Sbjct: 374 DIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLS 433
Query: 324 GYAVYGQVDDSKRLFEKM 341
A G +D F+ M
Sbjct: 434 ACAHAGLLDQGWWYFQSM 451
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV N I + + L + LF MP R VVSWN+M+ G+++ ++ E+L+ M
Sbjct: 258 IVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEF 317
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S V N T + LS CA +L G IH V K+ + S L+ Y+ C +I++
Sbjct: 318 SGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDK 377
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A ++F+E ++D+ WT ++ G A G
Sbjct: 378 AVQIFEE-------------------------------STRRDLFTWTSIVCGLAMHGRG 406
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
EKAL F M+E+ + P++ T V+ ACA G +G
Sbjct: 407 -EKALHYFSKMKEA-QVQPDDVTMVGVLSACAHAGLLDQG 444
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 3/237 (1%)
Query: 362 NPVTWNSMISGYVQNNL--HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
N WN+MI V+N L + L YM + + TF L A +++G+
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+HA +V+T F + +V +L+ Y CG + + F + P + WT ++ Y
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
+A+ LF M E + P+ V+SAC G + + ++ G+ +
Sbjct: 173 PEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSST 232
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
++ G G L A F ++ P++ + VVW ++ N+E+G++ Q M D
Sbjct: 233 LISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGKQLFQSMPDRD 288
>gi|414886077|tpg|DAA62091.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 656
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 324/627 (51%), Gaps = 60/627 (9%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N + R G L A+ L ++MP R VS+ T++ +++ ++++ +M N
Sbjct: 80 NSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVAVFRSMLSEN 139
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V NE T + ++ A+ + IH L+ + F V + L+ YA E+ A+
Sbjct: 140 VVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSAR 199
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+FD + N + W++ML GYV+ ++ A +VF ++P++D V W LI GY D
Sbjct: 200 ALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDGYI-CADLIS 258
Query: 200 KALKLFRWMRESGENMPNEYT--FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
A+K + M GE N+Y +++ACAR A EG+ +H +++K GF+ +
Sbjct: 259 DAMKAYVQM--VGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQA 316
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRLTEANSI 316
L+ FY GC G ++ RL + AS N+L+ L+ G I +A +F+ + E +++
Sbjct: 317 TLVHFY-GCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTV 375
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S+++MI GY G+ D + +LF M LNT I E N VT S +S +
Sbjct: 376 SWSTMISGYVQTGRSDMALKLFYSM-------LNTSI------EPNEVTLASALSAIADS 422
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
G+L QG+ +H +++ P + +
Sbjct: 423 -----------------------------------GTLDQGKWIHDYIMNRPVQLTDNLS 447
Query: 437 TSLVDMYSRCGSINDAQASFSSISS--PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+ L+DMY++CGSI DA F+ ++ +V+ W A++ + HG ++ LF +
Sbjct: 448 SGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTS 507
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
I PN+ TF+GVLSAC AG V +G F SM + YG+ PT++HY C+VDLLGR+G+L EA
Sbjct: 508 IKPNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEA 567
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
E+ + MP++ D V+WG++LSA N+ +GERAA+++ LD+ ++ + LSNIYA
Sbjct: 568 EQLVSMMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADA 627
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWI 640
G W +RK L +++ G S I
Sbjct: 628 GHWINVSVVRKELQDANLERLTGRSGI 654
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
++ ++ S N + RNG + AR LFD MP R VSW+TM+ GY + + D +L L
Sbjct: 337 LSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKL 396
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+M ++++ NE T ++ LS A +L GK IH ++ + + + SGL+ YA
Sbjct: 397 FYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAK 456
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C I +A + F+ ++ D F + + ++ + I GY
Sbjct: 457 CGSIADAVQFFNRVN------------------------DKFSSVSPWNAMICSLAIHGY 492
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
A +L LF ++ + PN TF V+ AC G +GK
Sbjct: 493 A------HMSLDLFSQLQRTSIK-PNSITFIGVLSACCHAGTVTKGK 532
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 44/174 (25%)
Query: 414 LQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGS---------------INDAQASFS 457
L+ G+ LHA K+ SNV+V S++ YSR S + DA A S
Sbjct: 22 LRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETPPPLRDATARNS 81
Query: 458 SISS-----------------PNV----AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+++ P + ++T L+ ++ G + AV +F ML +++V
Sbjct: 82 VLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVAVFRSMLSENVV 141
Query: 497 PNAATFVGVLSACVRAGL-----VNEGMKIFRSMKSYGVVPT--LEHYTCVVDL 543
PN AT G ++A R G + G + R++ + +V T + Y V++L
Sbjct: 142 PNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLEL 195
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 184/549 (33%), Positives = 292/549 (53%), Gaps = 60/549 (10%)
Query: 132 CFEIEEAKRVFDELHED----NELLWSLMLVGYVQCNLMSDAFD--VFIKMPKKDVVVWT 185
C ++E ++ +L + N+L S +LV Y + L++ A+ VF + + V+W
Sbjct: 20 CSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDSISSPNTVIWN 79
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLL 244
++ Y+ S D E AL L+ M + ++P N YTF +++AC+ L AF E + +H +
Sbjct: 80 TMLRAYSNSNDP-EAALLLYHQMLHN--SVPHNSYTFPFLLKACSALSAFEETQQIHAHI 136
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
IK GF + VY A+NSL+ G I+ A
Sbjct: 137 IKRGF----------------------GLEVY---------ATNSLLRVYAISGNIQSAH 165
Query: 305 LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV 364
++FN+L + +S+N MI GY +G +D + ++F+ MP E+N +
Sbjct: 166 VLFNQLPTRDIVSWNIMIDGYIKFGNLDMAYKIFQAMP-----------------EKNVI 208
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+W +MI G+V+ +H++AL L M I T S AC+ LG+L+QG+ +H ++
Sbjct: 209 SWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQGKWIHTYI 268
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
K + + +G L DMY +CG + A FS + V AWTA++ G + HG G EA+
Sbjct: 269 EKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTAIIGGLAIHGKGREAL 328
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDL 543
F M + I PN+ TF +L+AC AGL EG +F SM S Y + P++EHY C+VDL
Sbjct: 329 DWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNIKPSMEHYGCMVDL 388
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
+GR+G L EA EFI+ MP++ +A +WGALL+AC + E+G+ + + LD Y
Sbjct: 389 MGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELGKEIGKILIELDPDHSGRY 448
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
+ L++IYA G+W + + +R ++ H + PGCS I LN VH F D ++P+ IY
Sbjct: 449 IHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSITLNGVVHEFFAGDGSHPHIQEIY 508
Query: 664 ATLEHLTAN 672
+ +L AN
Sbjct: 509 G-MPNLLAN 516
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 207/423 (48%), Gaps = 24/423 (5%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L R +FD + V WNTML YS + +L L M ++V N TF +L
Sbjct: 60 LAYTRVVFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKA 119
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
C+ L++ + +QIH ++K G+ + + LL YA I+ A +F++L + + W
Sbjct: 120 CSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSW 179
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
++M+ GY++ + A+ +F MP+K+V+ WT +I G+ + + ++AL L + M +G
Sbjct: 180 NIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVR-IGMHKEALSLLQQMLVAGI 238
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+ T + ACA LGA +GK +H + K + D +G L + Y C + A+
Sbjct: 239 K-PDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKAL 297
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYG 329
V+ +LE C+ A ++I GL G+ +A F ++ +A NSI++ +++ + G
Sbjct: 298 LVFSKLEKKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAG 357
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
++ K LFE S++++ ++ P ME + M+ + L ++A + +M
Sbjct: 358 LTEEGKSLFE--------SMSSVYNIKPSMEH----YGCMVDLMGRAGLLKEAREFIESM 405
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGS 448
+ + + L +AC + G+ + L++ P S Y+ L +Y+ G
Sbjct: 406 ---PVKPNAAIWGALLNACQLHKHFELGKEIGKILIELDPDHSGRYI--HLASIYAAAGE 460
Query: 449 IND 451
N
Sbjct: 461 WNQ 463
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 100/221 (45%), Gaps = 33/221 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IVS N I + G L A +F MP + V+SW TM+ G+ + E+LSL+ M
Sbjct: 176 IVSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLV 235
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ +K + T S LS CA L +L GK IH + K+ + +G L Y C E+E+
Sbjct: 236 AGIKPDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEK 295
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A VF K+ KK V WT +I G A G
Sbjct: 296 ALLVFS-------------------------------KLEKKCVCAWTAIIGGLAIHGKG 324
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
E AL F M+++G N PN TF +++ AC+ G EGK
Sbjct: 325 RE-ALDWFTQMQKAGIN-PNSITFTAILTACSHAGLTEEGK 363
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 206/663 (31%), Positives = 325/663 (49%), Gaps = 63/663 (9%)
Query: 7 QSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
Q+ ++T L I K ++ G G AR +FDQ+P W +L Y
Sbjct: 74 QAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNN 133
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE-FVG 122
+ E + + + ++ FS L C ++ L +GK+IHC ++K F+ V
Sbjct: 134 ESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVK--VPSFDNVVL 191
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+GLL YA C EI+ + + VF + ++VV
Sbjct: 192 TGLLDMYAKCGEIKSS-------------------------------YKVFEDITLRNVV 220
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
WT +I+GY K+ D E+ L LF MRE+ + NEYT+ +++ AC +L A +GK HG
Sbjct: 221 CWTSMIAGYVKN-DLYEEGLVLFNRMRENSV-LGNEYTYGTLVMACTKLRALHQGKWFHG 278
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
LIK G E + +L++ Y C A RV++ + L ++I G G + +
Sbjct: 279 CLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE 338
Query: 303 AELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP- 357
A +F +++ + N ++ S++ G + G ++ + + I N +++
Sbjct: 339 ALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTNVANALVHM 398
Query: 358 ----------------EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
E E++ V WNS+ISG+ QN +AL L+ M ++ T
Sbjct: 399 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTV 458
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+ LF AC+ LGSL G LHA+ VK F S+V+VGT+L+D Y++CG A+ F +I
Sbjct: 459 ASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTI 518
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
N W+A++ GY G ++ LFE ML++ PN +TF VLSAC G+VNEG
Sbjct: 519 EEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGK 578
Query: 520 KIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
K F SM K Y P+ +HYTC+VD+L R+G L +A + I+ MPI+ D +GA L C
Sbjct: 579 KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGM 638
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
++GE +KM L S YV++SN+YA G+W + ++R + + K G S
Sbjct: 639 HSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGHS 698
Query: 639 WIE 641
+E
Sbjct: 699 IME 701
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/674 (28%), Positives = 333/674 (49%), Gaps = 63/674 (9%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G + A +F + VSW ++ +++ + E+L M ++ + F
Sbjct: 3 GKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFV 62
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV-GSGLLFFYANCFEIEEAKRVFDELHE 147
+ VC+ L G+ +H ++L++ F+ + G+ L+ YA C ++E A++ FDE
Sbjct: 63 VAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE--- 119
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
M KK +V W LI+GY+++ D ALK+++
Sbjct: 120 ----------------------------MGKKTLVTWNALIAGYSRNGDH-RGALKIYQD 150
Query: 208 M-RESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M +S E M P+ TF S + AC +G +G+ + + G+ D + ALI Y
Sbjct: 151 MVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSK 210
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSM 321
C + + A +V+DRL+N + A N++I+G G A +F R+ + N +++ +
Sbjct: 211 CGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGL 270
Query: 322 I----------KGYAVYGQVDDSK--------RLFEKMPHRSIISLNTMISVIPEME-RN 362
+ +G A++ +V + + M + SL V M R+
Sbjct: 271 LTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRD 330
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
+TWN +I YVQ + AL ++ M+ + T S + AC+ LG+ +QG+ +HA
Sbjct: 331 VITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHA 390
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+ +++V + SL++MY+RCGS++D F++I ++ +W+ L+ Y+ HG
Sbjct: 391 LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRT 450
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVV 541
+ F +L++ + + T V LSAC G++ EG++ F SM +G+ P H+ C+V
Sbjct: 451 GLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMV 510
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK-PI 600
DLL R+G L AE I DMP DAV W +LLS C + + R A K+F L+ +
Sbjct: 511 DLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEH 570
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
S +LSN+YA G+W D+RK +K+PGCS+IE+N VH F D+++P
Sbjct: 571 STVTLLSNVYAEAGRWD---DVRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEE 627
Query: 661 VIYATLEHLTANLN 674
+I A ++ L+ +
Sbjct: 628 LIAAEIKRLSKQMK 641
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 183/389 (47%), Gaps = 29/389 (7%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y +C ++DA VF + + V WT +++ +A++ +AL +R M G P+
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARN-GHYREALGYYRRMVLEGLR-PDGA 59
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
F I C+ +G+++H ++++ EFD +G ALI Y C + A + +D
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLT-------EANSISYNSMIKGYAVYGQV 331
+ L N+LI G G A I+ + + ++I+++S + V G +
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179
Query: 332 DDSKRLFEKM-----PHRSII------------SLNTMISVIPEME-RNPVTWNSMISGY 373
+ + + SI+ SL + V ++ R+ + WN+MISGY
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
+ +AL+L+ M TF L AC+ L L+QG+ +H + + +ES++
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299
Query: 434 YVGTSLVDMYSRC-GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
+G L++MY++C S+ +A+ F + + +V W L+ Y +G +A+ +F+ M
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+++ PN T VLSAC G +G +
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAV 388
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 183/411 (44%), Gaps = 58/411 (14%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
+ N I + G L +AR +FD++ R V++WNTM+ GY+K ++L L M +
Sbjct: 199 IVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPN 258
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC-FEIEE 137
+ K N TF +L+ C L L G+ IH V + GYE +G+ LL Y C +EE
Sbjct: 259 DPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEE 318
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++VF+ + + + W++++V YVQ DA D+F +M ++V
Sbjct: 319 ARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVA--------------- 363
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
PNE T +V+ ACA LGA +GK VH L+ + D +
Sbjct: 364 ------------------PNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLEN 405
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTE---A 313
+L+ Y C + D + V+ + + L + ++LI G E + L E A
Sbjct: 406 SLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAA 465
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKM--------PHRSIISLNTMISVIPEMER---- 361
+ ++ S + + G + + + F M +R + + ++S +E
Sbjct: 466 DDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENL 525
Query: 362 --------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+ V W S++SG +N ++A ++ + +L + ST ++L
Sbjct: 526 IHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLL 576
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY +CGS+ DA A F +I PN +WT ++ ++ +G EA+ + M+ + + P+ A
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 502 FVGVLSACVRAGLVNEG 518
FV + C + + +G
Sbjct: 61 FVVAIGVCSSSKDLKQG 77
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 286/514 (55%), Gaps = 32/514 (6%)
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
F ++P+KDV W +IS Y + +A+ F + E P+ YTF V++AC G
Sbjct: 74 FDQIPQKDVYAWNSMISAYVHN-GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---G 129
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR-VYDRLENPCLNASNSLI 291
+G+ +H K GF+++ + +LI Y F G R ++D + + + N++I
Sbjct: 130 TLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRF-GFTGIARSLFDDMPFRDMGSWNAMI 188
Query: 292 NGLISMGRIEDAELIFNRL----TEANSISYNSM----IKGYAVYGQVDDSKRLFEKMPH 343
+GLI G A + + + + N ++ S+ + YA G +D + ++FE +P
Sbjct: 189 SGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPV 248
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFS 402
+ +IS WN++I+GY QN L +A+++Y M + I + T+
Sbjct: 249 KDVIS-----------------WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWV 291
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ A + +G+LQQG +H ++KT +V+V T L+D+Y +CG + DA + F +
Sbjct: 292 SILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE 351
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
+ W A+++ + HG + + LF ML++ + P+ TFV +LSAC +G V EG F
Sbjct: 352 SSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF 411
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
R M+ YG+ P+L+HY C+VDLLGR+G+L A +FIKDMP++ DA +WGALL AC N+
Sbjct: 412 RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNI 471
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
E+G+ A+ ++F +D K + YV+LSNIYA +GKW +R +KK PG S IE+
Sbjct: 472 ELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEV 531
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
N +V F ++++P C IY L LTA + S+
Sbjct: 532 NRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSL 565
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 206/490 (42%), Gaps = 94/490 (19%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS-LVSTMHRSNVKLNETTFSTI 90
G + +R FDQ+P + V +WN+M+ Y F E++ + S ++ + TF +
Sbjct: 65 GDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPV 124
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L C +L+DG++IHC K G++ FV + L+ Y+ A+ +FD++ +
Sbjct: 125 LKACG---TLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDM 181
Query: 151 LLWSLMLVG---------------------------------------YVQCNLMSDAFD 171
W+ M+ G Y + L+ A
Sbjct: 182 GSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHK 241
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
VF +P KDV+ W LI+GYA++ E A+++++ M E E +PN+ T+ S++ A A +
Sbjct: 242 VFEIIPVKDVISWNTLITGYAQNGLASE-AIEVYKMMEECKEIIPNQGTWVSILPAYAHV 300
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
GA +G +HG +IK D + LI+ Y C
Sbjct: 301 GALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKC------------------------- 335
Query: 292 NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
GR+ DA +F ++ + +S+++N++I + ++G + + +LF +M +
Sbjct: 336 ------GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGV----- 384
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
+ + VT+ S++S + E+ + M++ I + + + L
Sbjct: 385 --------KPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCM---VDLL 433
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI---NDAQASFSSISSPNVAAWT 468
G ++ + + P + + + +L+ G+I A + S NV +
Sbjct: 434 GRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYV 493
Query: 469 ALMNGYSHHG 478
L N Y++ G
Sbjct: 494 LLSNIYANVG 503
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
+ LHA LV ++++ T LV++Y+ G ++ ++ +F I +V AW ++++ Y H
Sbjct: 35 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94
Query: 477 HGLGSEAV-LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
+G EA+ ++++L +I P+ TF VL AC G + +G KI G +
Sbjct: 95 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVF 151
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ + R G A DMP D W A++S
Sbjct: 152 VAASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISG 190
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 196/621 (31%), Positives = 318/621 (51%), Gaps = 66/621 (10%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
N TT L A +L GK+IH +L +G+ + L+ Y+ C ++ A +F
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF 95
Query: 143 -DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
D HE N ++ ++ G++ + F+ + KM + V+
Sbjct: 96 SDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVI------------------- 136
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
P+++TF I+AC + E K +HGLL K G E D IG AL+
Sbjct: 137 --------------PDKFTFPCAIKACLDV---LEIKKIHGLLFKFGLELDVFIGSALVN 179
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
Y + A ++ L + N+++NG +G+ E F R+ + + +
Sbjct: 180 CYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFT 239
Query: 322 IKG----YAVYGQVDDSKRLFE---KMPHRSIISL-NTMISV------------IPEM-- 359
+ G +AV G +++ + + KM + S +++ N++I + I EM
Sbjct: 240 VTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR 299
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
E++ +WNS++S + Q H+ L+L M I T + + ACS L +L G+
Sbjct: 300 EKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGRE 359
Query: 420 LHAHLVKTPFESN------VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
+H +++ + + V + +++DMY++CGS+ DA F +S+ +VA+W ++ G
Sbjct: 360 IHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMG 419
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVP 532
Y HG G+EA+ +F M E + P+ TFVGVLSAC AG V++G MKS Y V P
Sbjct: 420 YGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAP 479
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
T+EHYTCV+D+LGR+G L EA E MPIE + VVW ALL+AC + + E AAQ++
Sbjct: 480 TIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRV 539
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
F L+ + +YV++SN+Y +G++ + +++R + V+K PGCSWIEL + VH F
Sbjct: 540 FELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSA 599
Query: 653 DRNNPNCNVIYATLEHLTANL 673
DR +P + IYA L LTA L
Sbjct: 600 DRAHPEAHSIYAGLNSLTARL 620
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 145/327 (44%), Gaps = 61/327 (18%)
Query: 17 LIVSTNKAITECG-RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
L V A+ C + G + A+ F+++PIR VV WN M+ GY++ +F+ L M
Sbjct: 169 LDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRM 228
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ +V + T + +LSV A + L +G+ IH +K GY+ V + L+ Y C I
Sbjct: 229 NDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCI 288
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
E+A +F+ + E KD+ W ++S + +
Sbjct: 289 EDALEIFEMMRE-------------------------------KDIFSWNSIVSVHEQCG 317
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD-ES 254
D + L+L M +G P+ T +V+ AC+ L A G+ +HG +I G D +
Sbjct: 318 DH-DGTLRLLDRMLGAGIQ-PDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKD 375
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
I L++ N++I+ G + DA L+F R++ +
Sbjct: 376 IDDVLLK--------------------------NAVIDMYAKCGSMRDAHLVFERMSNKD 409
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKM 341
S+N MI GY ++G +++ +F +M
Sbjct: 410 VASWNIMIMGYGMHGYGNEALEMFSRM 436
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 184/453 (40%), Gaps = 66/453 (14%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHC 108
V ++N ++ G+ +E M V ++ TF + C + ++ K+IH
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDV---LEIKKIHG 160
Query: 109 LVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD 168
L+ K G E F+GS L+ Y +E A+ F+EL + +LW+ M+ GY Q
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
+ F +M + VV P+ +T V+
Sbjct: 221 VLETFRRMNDESVV---------------------------------PSRFTVTGVLSVF 247
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A +G G+++HG +K G++ ++ +LI+ Y C+ + A+ +++ + + + N
Sbjct: 248 AVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWN 307
Query: 289 SLINGLISMGRIEDAELIFNRLTEAN-------------------SISYNSMIKGYA-VY 328
S+++ G + + +R+ A ++ + I GY V
Sbjct: 308 SIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVS 367
Query: 329 GQVDDSKRLFEKMPHRSII-------SLNTMISVIPEMERNPV-TWNSMISGYVQNNLHE 380
G D K + + + ++I S+ V M V +WN MI GY +
Sbjct: 368 GLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGN 427
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ-LLHAHLVKTPFESNVYVGTSL 439
+AL+++ M ++ + TF + ACS G + QG+ L K + T +
Sbjct: 428 EALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCV 487
Query: 440 VDMYSRCGSINDA-QASFSSISSPNVAAWTALM 471
+DM R G +++A + + + N W AL+
Sbjct: 488 IDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 149/337 (44%), Gaps = 64/337 (18%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M ++ + +N I G+ + A +F+ M + + SWN+++ + + D +L L
Sbjct: 266 MGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRL 325
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ M + ++ + T +T+L C+ L +L+ G++IH ++ SG
Sbjct: 326 LDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLG--------------- 370
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
++ K + D+ LL + ++ Y +C M DA VF +M KDV W +I GY
Sbjct: 371 ----KDGKDI------DDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGY 420
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
G E AL++F M E + P+E TF V+ AC+ G +G+ L++ ++
Sbjct: 421 GMHGYGNE-ALEMFSRMCEV-QLKPDEVTFVGVLSACSHAGFVSQGR---NFLVQMKSKY 475
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRL 310
D + P + +I+ L G++++A EL
Sbjct: 476 DVA---------------------------PTIEHYTCVIDMLGRAGQLDEAYELALTMP 508
Query: 311 TEANSISYNSMIKG-----YAVYGQVDDSKRLFEKMP 342
EAN + + +++ +AV +V ++R+FE P
Sbjct: 509 IEANPVVWRALLAACRLHKHAVLAEV-AAQRVFELEP 544
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 99/193 (51%), Gaps = 14/193 (7%)
Query: 393 AIDRTRSTFSVLFHACSCLGSLQ---------QGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+I +F ++ +C+ SLQ +G+ +H++++ F ++ TSL++MY
Sbjct: 23 SISTAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMY 82
Query: 444 SRCGSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
S+C +N A + FS + NV A+ A+++G+ +G E ++ M + ++P+ TF
Sbjct: 83 SKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTF 142
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+ AC+ V E KI + +G+ + + +V+ + G + A+ +++PI
Sbjct: 143 PCAIKACLD---VLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI 199
Query: 563 ELDAVVWGALLSA 575
D V+W A+++
Sbjct: 200 R-DVVLWNAMVNG 211
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/590 (30%), Positives = 315/590 (53%), Gaps = 66/590 (11%)
Query: 104 KQIHCLVLK--SGYECFEF-VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
+Q H L +K S + + F V G L A I A+++FDE+ + + W+ ++ GY
Sbjct: 32 RQFHPLSIKLFSTQDVYAFNVQIGNL---ARAGNIGAARQLFDEMPHRDTVSWNSIITGY 88
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
+ ++ +F MP K+VV W +I+G + + ++A + F+ M + N +
Sbjct: 89 WKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIED-ERIDEAWQYFQAMPQR-----NTAS 142
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
++++I R + + A R+++ +
Sbjct: 143 WNAMISGLVRY-----------------------------------DRVEEASRLFEEMP 167
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
+ + ++++G +G IE A +FN + + N +S+ MI GY G+ D+++ LFE+
Sbjct: 168 RRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQ 227
Query: 341 MPHRSIISLNTMIS----------------VIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
MP ++I+++ MI+ IP R+ +WN+MI+GY QN E+AL+
Sbjct: 228 MPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPC--RDLASWNAMITGYAQNGSGEEALK 285
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
L+ M K+ + ST + ACS L SLQ+G+ H ++K+ +ES + + +L+ MY
Sbjct: 286 LHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYC 345
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+CGSI D++ +F I P+V +W A++ ++ HG A+ F M + P+ TF+
Sbjct: 346 KCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLS 405
Query: 505 VLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
+LSAC AG V+E + F SM +SY +VP EH+ C+VD+L R G + +A + I++MP E
Sbjct: 406 LLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFE 465
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
D +WGALL+AC +N+++GE AA+K+ L+ + AYV+LSNIYA G WG+ +R
Sbjct: 466 ADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVR 525
Query: 624 KRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ VKK P SW+E++++VH F +D ++P + I L+ + +
Sbjct: 526 GLMREQGVKKQPAYSWMEIDNKVHFFLGDDASHPEIHRIRLELKGMKLQM 575
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 136/564 (24%), Positives = 235/564 (41%), Gaps = 128/564 (22%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+KL++TQ + + N I R G + AR LFD+MP R VSWN+++ GY
Sbjct: 39 IKLFSTQD---------VYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYW 89
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
K FDES L M NV +++++++ C + + + Q + + +
Sbjct: 90 KNGCFDESKRLFGLMPTKNV----VSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNA 145
Query: 121 VGSGLLFF---------------------------YANCFEIEEAKRVFDELHEDNELLW 153
+ SGL+ + YA EIE+A+ +F+ + + N + W
Sbjct: 146 MISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSW 205
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVV------------------------------ 183
++M+ GYV+ +A ++F +MP K++V
Sbjct: 206 TVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLA 265
Query: 184 -WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W +I+GYA++ G E+ALKL M + G P+ T SV+ AC+ L + EG+ H
Sbjct: 266 SWNAMITGYAQNGSG-EEALKLHSQMLKMGMQ-PDHSTLISVLTACSSLASLQEGRKTHV 323
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
L++K G+E SI ALI YC C G I D
Sbjct: 324 LVLKSGYESRISICNALITMYCKC-------------------------------GSILD 352
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
+EL F ++ + +S+N+MI +A +G D R++ S M S +E +
Sbjct: 353 SELAFRQIDHPDVVSWNAMIAAFARHGFYD-----------RALASFGEMRS--NRVEPD 399
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+T+ S++S ++L + +M I F+ L S G +++ +
Sbjct: 400 GITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKI- 458
Query: 422 AHLVKTPFESNVYVGTSL-----VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
+ + PFE++ + +L V + + G + A + N A+ L N Y+
Sbjct: 459 --IQEMPFEADCGIWGALLAACHVHLNVKLGEL--AAKKIVELEPQNSGAYVVLSNIYAA 514
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAA 500
G+ E + +M EQ + A
Sbjct: 515 AGMWGEVTRVRGLMREQGVKKQPA 538
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 81/205 (39%), Gaps = 40/205 (19%)
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
R+ F +FH+ + + H +K +VY + +R G+I A+ F
Sbjct: 20 RTIFLPIFHSFN--------RQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQLFD 71
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP-------------------- 497
+ + +W +++ GY +G E+ LF +M +++V
Sbjct: 72 EMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQY 131
Query: 498 -------NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
N A++ ++S VR V E ++F M V+ YT +VD + G +
Sbjct: 132 FQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVI----SYTAMVDGYAKIGEI 187
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
+A MP + + V W ++S
Sbjct: 188 EQARALFNCMP-QKNVVSWTVMISG 211
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 191/672 (28%), Positives = 334/672 (49%), Gaps = 52/672 (7%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
++A +T+ +E + V+T+ + G+ G + A +FD+M R V+WN+M+ Y++
Sbjct: 176 VHAFVVKTIGLKECVYVATS-LVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQN 234
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
E++ + M V++ S + CA ++ +G+Q H L + G E +G
Sbjct: 235 GMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLG 294
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
S ++ FY IEEA+ VF + + + W+L++ GY Q ++
Sbjct: 295 SSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMV---------------- 338
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
EKAL++ MRE G + T +++ A G H
Sbjct: 339 ----------------EKALEMCCVMREEGLRF-DCVTLSALLAVAADTRDLVLGMKAHA 381
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
+K FE D + +I+ Y C D A RV+ + + N+++ G +
Sbjct: 382 YCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGE 441
Query: 303 AELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE 358
A +F ++ N +S+NS+I G+ GQV +++ +F +M ++
Sbjct: 442 ALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGVMP---------- 491
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
N +TW +M+SG VQN A+ ++ M+ + I + + C+ + L+ G+
Sbjct: 492 ---NLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGR 548
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H ++++ ++++ TS++DMY++CGS++ A+ F S+ + + A+++ Y+ HG
Sbjct: 549 AIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHG 608
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHY 537
EA++LF+ M ++ IVP+ T VLSAC GL+ EG+K+F+ M S + P+ EHY
Sbjct: 609 QAREALVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHY 668
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
C+V LL G L EA I MP DA + G+LL+AC ++E+ + A+ + LD
Sbjct: 669 GCLVKLLANDGQLDEALRTILTMPSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLDP 728
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
YV LSN+YA +GKW K ++R + ++K PGCSWIE+ +H F DR++P
Sbjct: 729 DNSGNYVALSNVYAAVGKWDKVSNLRGLMKEKGLRKIPGCSWIEVGQELHVFIASDRSHP 788
Query: 658 NCNVIYATLEHL 669
IY TL+ L
Sbjct: 789 KTEEIYVTLDLL 800
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/530 (23%), Positives = 227/530 (42%), Gaps = 68/530 (12%)
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG--YECF 118
K + E+++ ++ MH N+ + + T+L C +L Q+H V+K G +
Sbjct: 28 KHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPTFALN 87
Query: 119 EFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK 178
+FV S L+ YA C E A R +F P
Sbjct: 88 DFVISKLVILYAKCGASEPATR-------------------------------LFRDSPS 116
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+V W +I G CE+AL + M++ G P+ + +V++AC L GK
Sbjct: 117 PNVFSWAAII-GLHTRTGFCEEALFGYIKMQQDGLP-PDNFVLPNVLKACGVLKWVRFGK 174
Query: 239 VVHGLLIKC-GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
VH ++K G + + +L++ Y C A + A +V+D + NS++
Sbjct: 175 GVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQN 234
Query: 298 GRIEDAELIFNRL-------------------TEANSISYNSMIKGYAVYGQVDDSKRLF 338
G ++A +F + + ++ G AV G ++
Sbjct: 235 GMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLE-----L 289
Query: 339 EKMPHRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+ + SI++ + +I E E ++ VTWN +++GY Q + EKAL++ MR
Sbjct: 290 DNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMR 349
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+ + T S L + L G HA+ VK FE +V V + ++DMY++CG ++
Sbjct: 350 EEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMD 409
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A+ FS + ++ W ++ + GL EA+ LF M + + PN ++ ++
Sbjct: 410 CARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFF 469
Query: 511 RAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
+ G V E +F M S GV+P L +T ++ L ++G A ++M
Sbjct: 470 KNGQVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREM 519
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 27/267 (10%)
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
N + ++ YA G + + RLF P ++ S W ++I +
Sbjct: 87 NDFVISKLVILYAKCGASEPATRLFRDSPSPNVFS-----------------WAAIIGLH 129
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESN 432
+ E+AL Y+ M++ + + AC L ++ G+ +HA +VKT +
Sbjct: 130 TRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKEC 189
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
VYV TSLVDMY +CG++ DA F +S N W +++ Y+ +G+ EA+ +F M
Sbjct: 190 VYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRL 249
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE----HYTCVVDLLGRSG 548
Q + G +AC + V EG R VV LE + +++ + G
Sbjct: 250 QGVEVTLVALSGFFTACANSEAVGEG----RQGHGLAVVGGLELDNVLGSSIMNFYFKVG 305
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSA 575
+ EAE ++M ++ D V W +++
Sbjct: 306 LIEEAEVVFRNMAVK-DVVTWNLVVAG 331
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK--TPFESNVYVGT 437
+A+ M L + + + L C +L LHA ++K F N +V +
Sbjct: 33 REAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPTFALNDFVIS 92
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
LV +Y++CG+ A F SPNV +W A++ ++ G EA+ + M + + P
Sbjct: 93 KLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPP 152
Query: 498 NAATFVGVLSAC-----VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ VL AC VR G +G+ F +K+ G+ + T +VD+ G+ G + +
Sbjct: 153 DNFVLPNVLKACGVLKWVRFG---KGVHAF-VVKTIGLKECVYVATSLVDMYGKCGAVED 208
Query: 553 AEEFIKDMPIELDAVVWGALL 573
A + +M E + V W +++
Sbjct: 209 AGKVFDEMS-ERNDVTWNSMV 228
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 194/634 (30%), Positives = 317/634 (50%), Gaps = 95/634 (14%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A +F+Q+ T+V WN M+ G S+ E++ + + MH + N T +
Sbjct: 66 LHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKA 125
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
CA+++ ++ G++IH LK G+E + FV + L+ YA C ++
Sbjct: 126 CARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQL------------------ 167
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
G+ Q +F M +D+V W LI GY++ + ++ L+LF M +
Sbjct: 168 -----GFAQ--------KMFDGMLDRDLVSWNTLICGYSQ-YNKYKEVLRLFDAMTAANI 213
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
+ T +I AC+ LG + + + + E D +G LI+ Y
Sbjct: 214 K-ADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMY---------- 262
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAEL---IFNRLTEANSISYNSMIKGYAVYGQ 330
GR AEL +F+R+ E N +S+N+++ G+A G
Sbjct: 263 ------------------------GRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGN 298
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+ +++LF+ MP R +IS W SMI+GY Q + A++L+ M
Sbjct: 299 LTAARKLFDNMPKRDVIS-----------------WTSMITGYSQASQFSDAVKLFQEMM 341
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+ + T + + AC+ LG L G +H ++ + ++++YVG SL+DMY +CG +
Sbjct: 342 AAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVE 401
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A F + + +WT++++G + +G + A+ LF ML + + P TFVG+L AC
Sbjct: 402 KALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACA 461
Query: 511 RAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
AGLVN+G++ F SM+S +G+VP ++HY CVVDLL RSG++ +A EFIK MPI D VVW
Sbjct: 462 HAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVW 521
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
LLSAC N+ + E A +++ LD YV+LSN YA + +W M +R+ +
Sbjct: 522 RILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDS 581
Query: 630 EVKKDPGCSWIELNSRVHAFS-------VEDRNN 656
+V+K G S IE++ V +S VE RN+
Sbjct: 582 DVQKPSGSSSIEVDGMVSNYSQEPGLLQVETRND 615
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 213/426 (50%), Gaps = 22/426 (5%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + +N I GQL A+ +FD M R +VSWNT++CGYS++ K+ E L L
Sbjct: 148 ESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDA 207
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M +N+K + T I+ C+ L + + ++ E ++G+ L+ Y
Sbjct: 208 MTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSL 267
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
E A+ VFD + E N + W+ +++G+ + ++ A +F MPK+DV+ WT +I+GY+++
Sbjct: 268 AELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQA 327
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ A+KLF+ M + + P++ T SV+ ACA LG G VH + + G + D
Sbjct: 328 SQFSD-AVKLFQEMM-AAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIY 385
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---- 310
+G +LI+ YC C + A+ V+ R+++ + S+I+GL G A +F+++
Sbjct: 386 VGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREG 445
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
+ ++ ++ A G V+ FE S+ ++ ++P M+ + ++
Sbjct: 446 VQPTHGTFVGILLACAHAGLVNKGLEYFE--------SMESVHGLVPAMKH----YGCVV 493
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPF 429
++ +KA Y ++K+ I + +L AC G++ ++ L++ P
Sbjct: 494 DLLSRSGNIDKA---YEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPC 550
Query: 430 ESNVYV 435
+S YV
Sbjct: 551 DSGNYV 556
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 111/238 (46%), Gaps = 40/238 (16%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+E IVS N + + G L AR LFD MP R V+SW +M+ GYS+ ++F +++ L
Sbjct: 279 RERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQ 338
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M + VK ++ T +++LS CA L L G +H + + G + +VG+ L+ Y C
Sbjct: 339 EMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCG 398
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+E+A VF + + + + W+ ++ G ++G+A
Sbjct: 399 MVEKALEVFHRMKDKDSVSWTSVISGLA--------------------------VNGFAN 432
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-------KVVHGLL 244
S AL LF M G P TF ++ ACA G +G + VHGL+
Sbjct: 433 S------ALDLFSQMLREGVQ-PTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLV 483
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGS-INDAQASFSSISSPNVAAWTALMNGYSHHG 478
LHAHL++T ++ ++ + ++ YS + ++ A F+ I P + W ++ G S
Sbjct: 36 LHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQSD 95
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
EA+ ++ M Q I N T + + AC R + G KI G L
Sbjct: 96 HPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVSN 155
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
++ + G L A++ M ++ D V W L+
Sbjct: 156 ALIHMYAMCGQLGFAQKMFDGM-LDRDLVSWNTLI 189
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/639 (29%), Positives = 329/639 (51%), Gaps = 62/639 (9%)
Query: 44 MPI-----RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLN 98
MPI R + + L ++ A+ +++S + ++ + ++L +++L C
Sbjct: 1 MPISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTK 60
Query: 99 SLIDGKQIHCLVLKSGYE-CFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
SL GK IH + +G++ + + L+ Y C + +A +VFD++H N W+ M+
Sbjct: 61 SLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMV 120
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENMP 216
GYV+ ++ A VF MP++DVV W ++ GYA+ DG +AL ++ R SG
Sbjct: 121 SGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQ--DGNLHEALWFYKEFRRSGIKF- 177
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
NE++F ++ AC + + HG ++ GF + + ++I+ Y C
Sbjct: 178 NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC---------- 227
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
G++E A+ F+ +T + + ++I GYA G ++ +++
Sbjct: 228 ---------------------GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEK 266
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
LF +MP E+NPV+W ++I+GYV+ +AL L+ M L +
Sbjct: 267 LFCEMP-----------------EKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKP 309
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ TFS A + + SL+ G+ +H ++++T N V +SL+DMYS+ GS+ ++ F
Sbjct: 310 EQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF 369
Query: 457 SSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
+ W +++ + HGLG +A+ + + M++ + PN T V +L+AC +GLV
Sbjct: 370 RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLV 429
Query: 516 NEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
EG++ F SM +G+VP EHY C++DLLGR+G E I++MP E D +W A+L
Sbjct: 430 EEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILG 489
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
C N E+G++AA ++ LD + + Y++LS+IYA GKW +R + V K+
Sbjct: 490 VCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKE 549
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNV--IYATLEHLTA 671
SWIE+ +V AF+V D ++ + IY L +L A
Sbjct: 550 KAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAA 588
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 171/332 (51%), Gaps = 13/332 (3%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N ++ ++G LV AR +FD MP R VVSWNTM+ GY++ E+L R
Sbjct: 113 LYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR 172
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S +K NE +F+ +L+ C + L +Q H VL +G+ + ++ YA C ++E
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AKR FDE+ + +W+ ++ GY + M A +F +MP+K+ V WT LI+GY + G
Sbjct: 233 AKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSG 292
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+AL LFR M G P ++TF S + A A + + GK +HG +I+ + +
Sbjct: 293 -NRALDLFRKMIALGVK-PEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVIS 350
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENP--CLNASNSLINGLISMG------RIEDAELIFNR 309
+LI+ Y + + + RV+ ++ C+ N++I+ L G R+ D + F
Sbjct: 351 SLIDMYSKSGSLEASERVFRICDDKHDCV-FWNTMISALAQHGLGHKALRMLDDMIKFR- 408
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ N + ++ + G V++ R FE M
Sbjct: 409 -VQPNRTTLVVILNACSHSGLVEEGLRWFESM 439
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 197/687 (28%), Positives = 342/687 (49%), Gaps = 70/687 (10%)
Query: 28 CGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTF 87
C + V AR +F +M R++ WNT+L S+ +++E L S M R K + T
Sbjct: 4 CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTL 63
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKS---GYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
L C +L + G+ IH V K G + + VGS L++ Y
Sbjct: 64 PVALKACGELREVNYGEMIHGFVKKDVTLGSDLY--VGSSLIYMY--------------- 106
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
++C M +A +F ++ K D+V W+ ++SG+ K+ +A++
Sbjct: 107 ----------------IKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKN-GSPYQAVEF 149
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
FR M + + P+ T +++ AC +L G+ VHG +I+ GF D S+ +L+ Y
Sbjct: 150 FRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYA 209
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNS 320
AF A+ ++ + + + +++I + G +A L+FN + TE N +
Sbjct: 210 KSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLC 269
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSI---ISLNTMI-----------------SVIPEME 360
+++ A ++ ++ E + + + ++T + S IP
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPR-- 327
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV-LFHACSCLGSLQQGQL 419
++ V+W ++ISG+ N + ++++ + M R + V + +CS LG L+Q +
Sbjct: 328 KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKC 387
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
H++++K F+SN ++G SLV++YSRCGS+ +A F+ I+ + WT+L+ GY HG
Sbjct: 388 FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGK 447
Query: 480 GSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHY 537
G++A+ F M++ ++ PN TF+ +LSAC AGL++EG++IF+ M Y + P LEHY
Sbjct: 448 GTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHY 507
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
+VDLLGR G L A E K MP + G LL AC N E+ E A+K+F L+
Sbjct: 508 AVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELES 567
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
Y+++SN+Y V G+W +R + +KK S IE+ +VH F +D +P
Sbjct: 568 NHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHP 627
Query: 658 NCNVIYATLE----HLTANLNSVVLFD 680
+Y L+ H+ +L + V F+
Sbjct: 628 EKEPVYGLLKELDLHMKEDLENCVYFE 654
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/412 (36%), Positives = 248/412 (60%), Gaps = 10/412 (2%)
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A +++R+ + + N++++G G +++A IF ++ N IS+N ++ Y G++
Sbjct: 45 ARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRI 104
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERN---------PVTWNSMISGYVQNNLHEKA 382
+D+KRLFE +++S N ++ RN ++W++MI+GY QN E+A
Sbjct: 105 EDAKRLFESKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEA 164
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L ++ M++ RS+F+ CS + +L+ G+ LH LVK +++ YVG +L+ M
Sbjct: 165 LHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAM 224
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
Y +CGSI++A+ +F I +V +W +++GY+ HG G EA+ +FE+M I P+ AT
Sbjct: 225 YCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATM 284
Query: 503 VGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
V VL+AC AGLV++G + F SM + YG+ L HYTC+VDLLGR+G L EA+ +K+MP
Sbjct: 285 VSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMP 344
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
E DA WGALL A N E+GE+AAQ +F ++ Y++LS +YA G+W
Sbjct: 345 FEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGK 404
Query: 622 IRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+R + + VKK PG SW+E+ +++H F V D ++P+ + IY LE + L
Sbjct: 405 MRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKL 456
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 125/513 (24%), Positives = 224/513 (43%), Gaps = 111/513 (21%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
RN + AR+LFD+MP R + SWN ML GY + + +L M ++ +++
Sbjct: 7 RNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDI----VSWNA 62
Query: 90 ILSVCAQLNSLIDGKQI-HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+LS AQ + + ++I + + LK+G +GLL Y IE+AKR+F+ +
Sbjct: 63 MLSGYAQNGFVDEAREIFYKMPLKNG-----ISWNGLLAAYVQNGRIEDAKRLFESKMDW 117
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRW 207
+ W+ ++ G+V+ ++F MP++D + W+ +I+GY++ +GC E+AL F
Sbjct: 118 TLVSWNCLMGGFVR-----KRRNLFDNMPQRDSISWSAMIAGYSQ--NGCSEEALHFFVE 170
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M+ E + N +F + C+ + A G+ +H L+K G++ +G AL+ YC C
Sbjct: 171 MQRDCERL-NRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKC- 228
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAV 327
G I++A F + E + +S+N+MI GYA
Sbjct: 229 ------------------------------GSIDEARDAFQEILEKDVVSWNTMIHGYAR 258
Query: 328 YGQVDDSKRLFEKMPHRSIISLN-TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
+G +++ +FE M I + TM+SV+
Sbjct: 259 HGFGEEALTVFELMKTTGIRPDDATMVSVLA----------------------------- 289
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSR 445
ACS G + QG + ++ + + T +VD+ R
Sbjct: 290 --------------------ACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGR 329
Query: 446 CGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAAT 501
G + +AQ ++ P+ A W AL+ HG LG +A +I+ E + N+
Sbjct: 330 AGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAA---QIIFEME-PHNSGM 385
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGV--VP 532
++ + +G ++ K+ M++ GV VP
Sbjct: 386 YILLSKLYAASGRWSDAGKMRLEMRNKGVKKVP 418
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 149/335 (44%), Gaps = 60/335 (17%)
Query: 28 CGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTF 87
C G + RNLFD MP R +SW+ M+ GYS+ +E+L M R +LN ++F
Sbjct: 124 CLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSF 183
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
+ LS C+ + +L G+Q+HC ++K+GY+ +VG+ LL Y C I+EA+ F E+ E
Sbjct: 184 TCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILE 243
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
+ + W+ M+ GY + G+ E+AL +F
Sbjct: 244 KDVVSWNTMIHGYAR--------------------------HGFG------EEALTVFEL 271
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF------DESIGGALIE 261
M+ +G P++ T SV+ AC+ H L+ G E+ D I L+
Sbjct: 272 MKTTGIR-PDDATMVSVLAACS-----------HAGLVDQGSEYFYSMNRDYGITAKLVH 319
Query: 262 FYCGCEAFDGAMRVYDR---LENPCLNASNSLINGLISMGRI-------EDAELIFNRLT 311
+ C + A ++ + ++N + L+ RI E A I +
Sbjct: 320 YTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEME 379
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
NS Y + K YA G+ D+ ++ +M ++ +
Sbjct: 380 PHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGV 414
>gi|414886078|tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea mays]
Length = 714
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 324/627 (51%), Gaps = 60/627 (9%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N + R G L A+ L ++MP R VS+ T++ +++ ++++ +M N
Sbjct: 80 NSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVAVFRSMLSEN 139
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V NE T + ++ A+ + IH L+ + F V + L+ YA E+ A+
Sbjct: 140 VVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSAR 199
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+FD + N + W++ML GYV+ ++ A +VF ++P++D V W LI GY D
Sbjct: 200 ALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDGYI-CADLIS 258
Query: 200 KALKLFRWMRESGENMPNEYT--FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
A+K + M GE N+Y +++ACAR A EG+ +H +++K GF+ +
Sbjct: 259 DAMKAYVQM--VGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQA 316
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRLTEANSI 316
L+ FY GC G ++ RL + AS N+L+ L+ G I +A +F+ + E +++
Sbjct: 317 TLVHFY-GCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTV 375
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S+++MI GY G+ D + +LF M LNT I E N VT S +S +
Sbjct: 376 SWSTMISGYVQTGRSDMALKLFYSM-------LNTSI------EPNEVTLASALSAIADS 422
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
G+L QG+ +H +++ P + +
Sbjct: 423 -----------------------------------GTLDQGKWIHDYIMNRPVQLTDNLS 447
Query: 437 TSLVDMYSRCGSINDAQASFSSISS--PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+ L+DMY++CGSI DA F+ ++ +V+ W A++ + HG ++ LF +
Sbjct: 448 SGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTS 507
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
I PN+ TF+GVLSAC AG V +G F SM + YG+ PT++HY C+VDLLGR+G+L EA
Sbjct: 508 IKPNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEA 567
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
E+ + MP++ D V+WG++LSA N+ +GERAA+++ LD+ ++ + LSNIYA
Sbjct: 568 EQLVSMMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADA 627
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWI 640
G W +RK L +++ G S I
Sbjct: 628 GHWINVSVVRKELQDANLERLTGRSGI 654
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
++ ++ S N + RNG + AR LFD MP R VSW+TM+ GY + + D +L L
Sbjct: 337 LSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKL 396
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+M ++++ NE T ++ LS A +L GK IH ++ + + + SGL+ YA
Sbjct: 397 FYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAK 456
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C I +A + F+ ++ D F + + ++ + I GY
Sbjct: 457 CGSIADAVQFFNRVN------------------------DKFSSVSPWNAMICSLAIHGY 492
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
A +L LF ++ + PN TF V+ AC G +GK
Sbjct: 493 A------HMSLDLFSQLQRTSIK-PNSITFIGVLSACCHAGTVTKGK 532
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 44/174 (25%)
Query: 414 LQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGS---------------INDAQASFS 457
L+ G+ LHA K+ SNV+V S++ YSR S + DA A S
Sbjct: 22 LRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETPPPLRDATARNS 81
Query: 458 SISS-----------------PNV----AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+++ P + ++T L+ ++ G + AV +F ML +++V
Sbjct: 82 VLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVAVFRSMLSENVV 141
Query: 497 PNAATFVGVLSACVRAGL-----VNEGMKIFRSMKSYGVVPT--LEHYTCVVDL 543
PN AT G ++A R G + G + R++ + +V T + Y V++L
Sbjct: 142 PNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLEL 195
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 193/638 (30%), Positives = 319/638 (50%), Gaps = 58/638 (9%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+S + C L + K IH ++++ F+ + ++ YA A+RVFD +
Sbjct: 6 YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLF 205
+ N W+ +L+ Y + +S+ F K+P +D V W LI GY S+ G A+K +
Sbjct: 66 QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGY--SLSGLVGAAVKAY 123
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M + + T ++++ + G GK +HG +IK GFE +G L++ Y
Sbjct: 124 NTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSK 183
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
A +V+ L++ N+L+ GL++ G IEDA +F R E +S+S+++MIKG
Sbjct: 184 VGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLF-RGMEKDSVSWSAMIKGL 242
Query: 326 AVYGQVDDSKRLFEKMP------------------------------HRSIISLNT---- 351
A G ++ F +M H II N
Sbjct: 243 AQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHI 302
Query: 352 -MISVIPEM------------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+ S + +M ++N V+W +M+ GY Q +A+++++ M++
Sbjct: 303 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRS 362
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
ID T AC+ + SL++G H + + V SLV +Y +CG I+D+
Sbjct: 363 GIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDS 422
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
F+ ++ + +WTA+++ Y+ G EA+ LF+ M++ + P+ T GV+SAC RA
Sbjct: 423 TRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRA 482
Query: 513 GLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GLV +G + F M YG+VP+ HY+C++DL RSG + EA FI MP DA+ W
Sbjct: 483 GLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTT 542
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
LLSAC N+E+G+ AA+ + LD + Y +LS+IYA GKW +R+ + V
Sbjct: 543 LLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNV 602
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+K+PG SWI+ ++H+FS +D ++P + IYA LE L
Sbjct: 603 RKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEEL 640
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 243/520 (46%), Gaps = 67/520 (12%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
+YA + + Q L S N + ++G L F+++P R V+WN ++ GYS
Sbjct: 55 IYARRVFDGIPQPNLF-SWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLS 113
Query: 63 AKFDESLSLVSTMHRS-NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
++ +TM + + L T T+L + + + GKQIH V+K G+E + V
Sbjct: 114 GLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLV 173
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
GS LL Y+ I +AK+VF L + N ++++ ++ G + C ++ DA +F M +KD
Sbjct: 174 GSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGM-EKDS 232
Query: 182 VVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
V W+ +I G A+ +G EK A++ FR M+ G M ++Y F SV+ AC LGA +G+ +
Sbjct: 233 VSWSAMIKGLAQ--NGMEKEAIECFREMKIEGLKM-DQYPFGSVLPACGGLGAINDGRQI 289
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
H +I+ + +G ALI+ YC C+ A V+DR++ + + +++ G GR
Sbjct: 290 HACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRA 349
Query: 301 EDAELIF-----------------------------------NRLTEANSISY----NSM 321
+A IF + A I Y NS+
Sbjct: 350 GEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSL 409
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK 381
+ Y G +DDS RLF +M R+ V+W +M+S Y Q +
Sbjct: 410 VTLYGKCGDIDDSTRLFNEMN-----------------VRDEVSWTAMVSAYAQFGRAVE 452
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT--PFESNVYVGTSL 439
A+QL+ M +L + T + + ACS G +++GQ ++ SN + + +
Sbjct: 453 AIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHY-SCM 511
Query: 440 VDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
+D++SR G I +A + + P+ WT L++ + G
Sbjct: 512 IDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKG 551
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 306/550 (55%), Gaps = 20/550 (3%)
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
LH+D + ++ + C ++ A +VF +P +V ++ +I +A +
Sbjct: 49 LHQD-LFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNSSHRSLPFNA 107
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY- 263
F M+++G P+ +T+ +++AC+ + +++H + K GF D + +LI+ Y
Sbjct: 108 FFQMQKNGL-FPDNFTYPFLLKACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYS 166
Query: 264 -CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI 322
CG DGAM ++ +E + NS+I GL+ G ++ A +F+ + + + +S+N+M+
Sbjct: 167 RCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMPDRDMVSWNTML 226
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMI---SVIPEME-----------RNPVTWNS 368
GYA G++D + LFE+MP R+I+S +TM+ S +M+ +N V W +
Sbjct: 227 DGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTT 286
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
+I+GY + L +A +LY M + + + AC+ G L G+ +HA + +
Sbjct: 287 IIAGYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAACAESGMLGLGKRIHASMRRWR 346
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F V + +DMY++CG ++ A FS + + +V +W +++ G++ HG G +A+ LF
Sbjct: 347 FRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELF 406
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
M+++ P+ TFVG+L AC AGLVNEG K F SM K YG+VP +EHY C++DLLGR
Sbjct: 407 SWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGR 466
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
GHL EA ++ MP+E +A++ G LL+AC ++++ +++F L+ Y +L
Sbjct: 467 GGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDVDLARAVCEQLFKLEPSDPGNYSLL 526
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SNIYA G W ++R ++ + +K G S IE+ VH F+V D+++P + IY +
Sbjct: 527 SNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYQMI 586
Query: 667 EHLTANLNSV 676
+ L +L V
Sbjct: 587 DRLVQDLRQV 596
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 107/253 (42%), Gaps = 65/253 (25%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD----------- 66
+VS N + + G++ TA LF++MP R +VSW+TM+CGYSK D
Sbjct: 219 MVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLFDRCPV 278
Query: 67 --------------------ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
E+ L M + ++ ++ +IL+ CA+ L GK+I
Sbjct: 279 KNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAACAESGMLGLGKRI 338
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H + + + C V + + YA C +
Sbjct: 339 HASMRRWRFRCGAKVLNAFIDMYAKC-------------------------------GCL 367
Query: 167 SDAFDVFIK-MPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
AFDVF M KKDVV W +I G+A G EKAL+LF WM + G P+ YTF ++
Sbjct: 368 DAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHG-EKALELFSWMVQEGFE-PDTYTFVGLL 425
Query: 226 RACARLGAFCEGK 238
AC G EG+
Sbjct: 426 CACTHAGLVNEGR 438
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 179/428 (41%), Gaps = 65/428 (15%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
+ CG N L A +LF M R VV+WN+M+ G + + + L M ++
Sbjct: 166 SRCG-NAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMPDRDM----- 219
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
N+++DG YA E++ A +F+ +
Sbjct: 220 ---------VSWNTMLDG-------------------------YAKAGEMDTAFELFERM 245
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
N + WS M+ GY + M A +F + P K+VV+WT +I+GYA+ +A +L+
Sbjct: 246 PWRNIVSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEK-GLAREATELY 304
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M E+G P++ S++ ACA G GK +H + + F + A I+ Y
Sbjct: 305 GKMEEAGMR-PDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAK 363
Query: 266 CEAFDGAMRVYD-RLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNS 320
C D A V+ + + + NS+I G G E A +F+ + E ++ ++
Sbjct: 364 CGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVG 423
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
++ G V++ ++ F S+ + ++P++E + + G +L E
Sbjct: 424 LLCACTHAGLVNEGRKYF--------YSMEKVYGIVPQVEHYGCMMDLLGRG---GHLKE 472
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSL 439
+M +R + ++ L +AC + + + L K P + Y + L
Sbjct: 473 A----FMLLRSMPMEPNAIILGTLLNACRMHNDVDLARAVCEQLFKLEPSDPGNY--SLL 526
Query: 440 VDMYSRCG 447
++Y++ G
Sbjct: 527 SNIYAQAG 534
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
H C+ L S+ Q +HA ++K +++V L+ +S C + A F+ + PNV
Sbjct: 28 LHKCTNLDSVNQ---IHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNV 84
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEI---MLEQDIVPNAATFVGVLSAC 509
+ +++ ++H+ S L F M + + P+ T+ +L AC
Sbjct: 85 HLYNSIIRAHAHN--SSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKAC 130
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 216/694 (31%), Positives = 350/694 (50%), Gaps = 89/694 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK-------WAKFDESL- 69
I +N+ IT ++G L A+ LFD+MP R V SWN ++ Y K A FD ++
Sbjct: 446 IFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSQNLRQARALFDSAVC 505
Query: 70 -------SLVSTMHRSN-------------------VKLNETTFSTILSVCAQLNSLIDG 103
S++S RS+ ++++E T T+L++ A+L + G
Sbjct: 506 KDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAKLCVISYG 565
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED-NELLWSLMLVGYVQ 162
KQ+H +LK+ + F S L+ Y+ C +EA RV+ E + + + M+ +
Sbjct: 566 KQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNAMVAACCR 625
Query: 163 CNLMSDAFDVFIK-MPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP-NEYT 220
+ A D+F K + + DVV W +ISG+ ++ E++LKLF +R + E + NE+T
Sbjct: 626 EGEIDVALDLFWKELEQNDVVAWNTMISGFVQN-GYEEESLKLF--VRMADEKVGWNEHT 682
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
F SV+ AC+ L + GK VH ++K + I L++ YC C
Sbjct: 683 FASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKC-------------- 728
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
+ AE + + L N S SMI GY+ G + ++++LF+
Sbjct: 729 -----------------NNMRYAESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDS 771
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+ E+N V W ++ GYV+ E +L RK A
Sbjct: 772 LD-----------------EKNSVVWTALFFGYVKLQQCEAVFELLSEYRKEAKVPDVLI 814
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ AC+ +L G+ +H+++++ + + + +SLVDMYS+CGSI A+ F ++
Sbjct: 815 LISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYAERIFREVT 874
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ + ++ GY+HHG +EAV LF+ M++ P+A TFV +LSAC GLV G
Sbjct: 875 DKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLSACRHGGLVELGEH 934
Query: 521 IFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
F SM + Y + P ++HY C++DL GR+ L +A EF++ +PI+LDAV+WGA L+AC
Sbjct: 935 FFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKIPIQLDAVIWGAFLNACRIN 994
Query: 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSW 639
N E+ +A ++ ++ + S YV L+N+YA G W + IRK++ EVKK+ GCSW
Sbjct: 995 GNAELARKAEDELLVIEGENGSRYVQLANVYAAEGNWEEMGRIRKKMKGKEVKKNAGCSW 1054
Query: 640 IELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ + S+ H F DR + IY+TL LT L
Sbjct: 1055 VFVESKFHVFISGDRFHSKNEAIYSTLASLTDEL 1088
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 240/515 (46%), Gaps = 85/515 (16%)
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
++ L G H +KSG+ F+ + L+ FYA + +A+++FDE+ E N W+
Sbjct: 423 EMKHLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNA 482
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGEN 214
++ YV+ + A +F KD+V + ++SGYA+S DG + +AL F M+ + +
Sbjct: 483 IIAAYVKSQNLRQARALFDSAVCKDLVTYNSMLSGYARS-DGYQGQALGFFMEMQTAPDM 541
Query: 215 MP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
+ +E+T +++ A+L GK +H ++K + +LI+ Y C F A
Sbjct: 542 IRIDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEAC 601
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
RVY G + D S+S N+M+ G++D
Sbjct: 602 RVY------------------YGCGEVVD------------SVSRNAMVAACCREGEIDV 631
Query: 334 SKRLF-EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+ LF +++ +++ NTM ISG+VQN E++L+L++ M
Sbjct: 632 ALDLFWKELEQNDVVAWNTM-----------------ISGFVQNGYEEESLKLFVRMADE 674
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ TF+ + ACS L SL+ G+ +HA+++K +N ++ + LVD+Y +C ++ A
Sbjct: 675 KVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYA 734
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI----------------- 495
++ S + NV + T+++ GYS G +EA LF+ + E++
Sbjct: 735 ESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFFGYVKLQQCE 794
Query: 496 --------------VPNAATFVGVLSAC-VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
VP+ + ++ AC ++A LV G +I M G+ + + +
Sbjct: 795 AVFELLSEYRKEAKVPDVLILISIIGACAIQAALV-PGKQIHSYMLRAGIKLDTKLTSSL 853
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
VD+ + G + AE +++ + D++++ +++
Sbjct: 854 VDMYSKCGSIIYAERIFREV-TDKDSIIYNIMIAG 887
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 198/643 (30%), Positives = 307/643 (47%), Gaps = 94/643 (14%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+F IL C L+ GK +H + LKS ++ + + Y+ C + A F++
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
HE N ++ ++ Y + +L+ A +F ++P+ D+V + LI+ YA D AL LF
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLS-ALSLF 128
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
MRE G M + +TF VI AC + +H L GF+ S+ +L+ +Y
Sbjct: 129 GEMREMGLVM-DGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSK 185
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA--NSISYNSMIK 323
NG++ E+AE++FN + E + +S+NSMI
Sbjct: 186 --------------------------NGIL-----EEAEMVFNGMGEEVRDEVSWNSMIV 214
Query: 324 GYAVYGQVDDSKRLFEKMPHR-------SIISLNTMISVIPEME---------------- 360
Y + + + L+ M HR ++ S+ T S + ++
Sbjct: 215 AYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNK 274
Query: 361 -------------------------------RNPVTWNSMISGYVQNN-LHEKALQLYMT 388
+ V WN+MISGY QN L +AL+ +
Sbjct: 275 NRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQ 334
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN-VYVGTSLVDMYSRCG 447
M++ +F ACS L S QG+ HA +K+ SN + V +LV MYS+CG
Sbjct: 335 MQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCG 394
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
++ DA+ F + N +++ GY+ HG+G+E++ LFE ML I P + T V +LS
Sbjct: 395 NLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILS 454
Query: 508 ACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
AC G V EG K F MK +G+ P EHY+C++DLLGR+G L EAE I MP +
Sbjct: 455 ACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGS 514
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
W ALL AC + NME+ E+AA + L+ Y++L+++Y+ KW + IRK +
Sbjct: 515 AAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLM 574
Query: 627 THLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
++K PGCSWIELN RVH F ED ++P I+ L+ +
Sbjct: 575 RDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEM 617
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 137/566 (24%), Positives = 242/566 (42%), Gaps = 103/566 (18%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLV 72
T E + S N I + + A +LFDQ+P +VS+NT++ Y+ +LSL
Sbjct: 69 THEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLF 128
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M + ++ TFS +++ C LI +Q+H L SG++ + V + LL +Y+
Sbjct: 129 GEMREMGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKN 186
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
+EEA+ VF+ + E+ +D V W +I Y
Sbjct: 187 GILEEAEMVFNGMGEE-----------------------------VRDEVSWNSMIVAYG 217
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+ G KAL L+R M G + + +T SV+ + + G H IK GF +
Sbjct: 218 QHKRGL-KALALYRDMVHRGFEI-DMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKN 275
Query: 253 ESIGGALIEFYCGCEA-FDGAMRVYDRLENPCLNASNSLING--------------LISM 297
+G LI+ Y C A + +V++ + L N++I+G M
Sbjct: 276 RHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQM 335
Query: 298 GRI----EDAELI-----------------FNRLT-----EANSISY-NSMIKGYAVYGQ 330
R +D + F+ L +N IS N+++ Y+ G
Sbjct: 336 QRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGN 395
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+ D+++LF++MP + N VT NS+I+GY Q+ + ++L L+ M
Sbjct: 396 LQDARKLFQRMP-----------------QHNTVTLNSIIAGYAQHGIGTESLNLFEQML 438
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGS 448
+I T T + AC+ G +++G+ + +++K F E + ++D+ R G
Sbjct: 439 AASIAPTSITLVSILSACAHTGRVEEGK-KYFNMMKDIFGIEPEAEHYSCMIDLLGRAGK 497
Query: 449 INDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVG 504
+++A+ ++ SP AAW AL+ +G L +A F + LE NA ++
Sbjct: 498 LSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQF-LQLEP---TNAVPYIM 553
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGV 530
+ S A E +I + M+ G+
Sbjct: 554 LASMYSAARKWEEAARIRKLMRDRGI 579
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 44/216 (20%)
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
T +F + +C L G+ LH +K+ S+ Y+ + +YS+C + A +F
Sbjct: 7 TLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAF 66
Query: 457 SSISSPNVAAWTA-------------------------------LMNGYSHHGLGSEAVL 485
+ PNV ++ A L+N Y+ G A+
Sbjct: 67 NQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALS 126
Query: 486 LFEIMLEQDIVPNAATFVGVLSACV-RAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
LF M E +V + TF GV++AC GL+ R + S + Y V + L
Sbjct: 127 LFGEMREMGLVMDGFTFSGVITACCNHVGLI-------RQLHSLAFSSGFDSYVSVKNSL 179
Query: 545 ----GRSGHLHEAEEFIKDMPIEL-DAVVWGALLSA 575
++G L EAE M E+ D V W +++ A
Sbjct: 180 LTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVA 215
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 193/654 (29%), Positives = 314/654 (48%), Gaps = 98/654 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ N+ I E G++ AR LFD+ P R VVSW M+ Y++ + E+ +L +HR
Sbjct: 39 VQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASAL---LHR 95
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + N T++ +LS YA ++E
Sbjct: 96 PDARRNVVTWTALLS-----------------------------------GYARARRVDE 120
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ +FD + E N + W+ ML Y M A +F MP +D W L++ +S
Sbjct: 121 ARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVRS-GT 179
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
++A +LF M E N ++ ++I AR G+ E + +
Sbjct: 180 MDEARRLFERMPER-----NVMSWTTMISGLARSGSADEARAL----------------- 217
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
FDG + + + N++I+G RI++A +F + E + S
Sbjct: 218 -----------FDG-------MPERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVAS 259
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+N MI G+ + ++ LF++MP +RN V+W +M++G +Q N
Sbjct: 260 WNIMITGFIQNKDLKKAQELFDEMP-----------------KRNVVSWTTMMNGCLQGN 302
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
E ALQ++ M I + TF A S L L +GQ +H + KTPF+ + ++ +
Sbjct: 303 ESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIES 362
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SL+ +Y++CG I A+ F +V +W ++ Y+HHG G EA+ L+E M E P
Sbjct: 363 SLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIALYEKMQENRYKP 422
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
N T+VG+LSAC +GLV+EG++IF M K + EHY+C++DL R+G L +A+
Sbjct: 423 NDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRAGRLDDAKRL 482
Query: 557 IKDMPIE-LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
I + ++ + VW ALL C N +G+ AA+ + + Y +LSNIYA GK
Sbjct: 483 INGLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLEAEPDNAGTYTLLSNIYASAGK 542
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
W + IR + +KK PGCSWIEL ++VH F D+++ +IY+ L+ +
Sbjct: 543 WKEAAKIRSEMNDRGLKKQPGCSWIELANKVHVFVARDKSHSESELIYSLLQDI 596
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/518 (24%), Positives = 219/518 (42%), Gaps = 91/518 (17%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS N + G++ A LFD MP+R SWN +L + DE+ L
Sbjct: 130 ERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVRSGTMDEARRLFER 189
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M NV +++T++S A+ S + + + + + + + SG YA
Sbjct: 190 MPERNV----MSWTTMISGLARSGSADEARALFDGMPERNVVSWNAMISG----YARNLR 241
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I+EA +F + E + W++M+ G++Q + A ++F +MPK++VV WT +++G +
Sbjct: 242 IDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQG 301
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ E AL++F M G PN+ TF + A + L EG+ VH ++ K F+FD
Sbjct: 302 -NESEMALQVFNGMLVDGIR-PNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNF 359
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
I +L++ Y C G I A +F+ E +
Sbjct: 360 IESSLMKLYAKC-------------------------------GEIRLARKVFDLSGEKD 388
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
IS+N MI YA +G ++ L+EKM + N VT+ ++S
Sbjct: 389 VISWNGMIAAYAHHGAGVEAIALYEKMQEN-------------RYKPNDVTYVGLLSACS 435
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
+ L ++ L+++ M K + +V SCL
Sbjct: 436 HSGLVDEGLRIFEYMAK------DKSIAVRDEHYSCL----------------------- 466
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAA--WTALMNGYSHHGLGSEAVLLFEIMLE 492
+D+ SR G ++DA+ + + ++ W+AL+ G + HG S L +LE
Sbjct: 467 -----IDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLE 521
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
+ NA T+ + + AG E KI M G+
Sbjct: 522 AE-PDNAGTYTLLSNIYASAGKWKEAAKIRSEMNDRGL 558
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 145/310 (46%), Gaps = 35/310 (11%)
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAV 327
++ GA V+ + N I L + GR+ DA +F+R + + +S+ +M+ YA
Sbjct: 23 SYHGAAAVFSTDAFSHVQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYAR 82
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
GQ+ ++ L HR P+ RN VTW +++SGY + ++A L+
Sbjct: 83 QGQLHEASALL----HR------------PDARRNVVTWTALLSGYARARRVDEARALFD 126
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
M +R +++ + A + G + L V+ N+ + +LV R
Sbjct: 127 RM----PERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILL-AALV----RS 177
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G++++A+ F + NV +WT +++G + G EA LF+ M E+++V ++ ++
Sbjct: 178 GTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGMPERNVV----SWNAMI 233
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
S R ++E + +F +M V + ++ ++ L +A+E +MP + +
Sbjct: 234 SGYARNLRIDEALDLFMNMPERDVAS----WNIMITGFIQNKDLKKAQELFDEMP-KRNV 288
Query: 567 VVWGALLSAC 576
V W +++ C
Sbjct: 289 VSWTTMMNGC 298
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 302/550 (54%), Gaps = 20/550 (3%)
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
LH+D + ++ + C ++ A +VF +P +V ++ +I +A +
Sbjct: 49 LHQD-LFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNTSHPSLPFNA 107
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY- 263
F M+++G P+ +T+ +++AC + +++H + K GF D + +LI+ Y
Sbjct: 108 FFQMQKNGL-FPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYS 166
Query: 264 -CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI 322
CG DGAM ++ ++ + NS+I GL+ G +E A +F+ + E + +S+N+M+
Sbjct: 167 RCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERDMVSWNTML 226
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMI---SVIPEME-----------RNPVTWNS 368
GYA G++D + LFE+MP R+I+S +TM+ S +M+ +N V W +
Sbjct: 227 DGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTT 286
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
+I+GY + +A +LY M + + + AC+ G L G+ +HA + +
Sbjct: 287 IIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHASMRRWR 346
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F V + +DMY++CG ++ A FS + + +V +W +++ G++ HG G +A+ LF
Sbjct: 347 FRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELF 406
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
M+ + P+ TFVG+L AC AGLVNEG K F SM K YG+VP +EHY C++DLLGR
Sbjct: 407 SRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGR 466
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
GHL EA ++ MP+E +A++ G LL+AC +++ +++F ++ Y +L
Sbjct: 467 GGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHNDVDFARAVCEQLFKVEPTDPGNYSLL 526
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SNIYA G W ++R ++ + +K G S IE+ VH F+V D+++P + IY +
Sbjct: 527 SNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYKMI 586
Query: 667 EHLTANLNSV 676
+ L +L V
Sbjct: 587 DRLVQDLRQV 596
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 149/340 (43%), Gaps = 55/340 (16%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
+ CG G L A +LF M R VV+WN+M+ G + + + + L M ++
Sbjct: 166 SRCGSAG-LDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERDM----- 219
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
N+++DG YA E++ A +F+ +
Sbjct: 220 ---------VSWNTMLDG-------------------------YAKAGEMDRAFELFERM 245
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ N + WS M+ GY + M A +F + P K+VV+WT +I+GYA+ +A +L+
Sbjct: 246 PQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEK-GFVREATELY 304
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M E+G P++ S++ ACA G GK +H + + F + A I+ Y
Sbjct: 305 GKMEEAGLR-PDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAK 363
Query: 266 CEAFDGAMRVYD-RLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNS 320
C D A V+ + + + NS+I G G E A +F+R+ E ++ ++
Sbjct: 364 CGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVG 423
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
++ G V++ ++ F S+ + ++P++E
Sbjct: 424 LLCACTHAGLVNEGRKYF--------YSMEKVYGIVPQVE 455
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 105/256 (41%), Gaps = 65/256 (25%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-------- 66
E +VS N + + G++ A LF++MP R +VSW+TM+CGYSK D
Sbjct: 216 ERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDR 275
Query: 67 -----------------------ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
E+ L M + ++ ++ +IL+ CA+ L G
Sbjct: 276 CPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGLG 335
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
K+IH + + + C V + + YA C
Sbjct: 336 KRIHASMRRWRFRCGTKVLNAFIDMYAKC------------------------------- 364
Query: 164 NLMSDAFDVFIK-MPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
+ AFDVF M KKDVV W +I G+A G EKAL+LF M G P+ YTF
Sbjct: 365 GCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHG-EKALELFSRMVPEGFE-PDTYTFV 422
Query: 223 SVIRACARLGAFCEGK 238
++ AC G EG+
Sbjct: 423 GLLCACTHAGLVNEGR 438
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 196/462 (42%), Gaps = 47/462 (10%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDE-SLSLVSTMHRSNVKLNETTFSTIL 91
L +A N+F+ +P V +N+++ ++ + M ++ + + T+ +L
Sbjct: 68 HLASAVNVFNHVPHPNVHLYNSIIRAHAHNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLL 127
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE--IEEAKRVFDELHEDN 149
C +SL + IH V K G+ FV + L+ Y+ C ++ A +F + E +
Sbjct: 128 KACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERD 187
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ G V+C + A +F +MP++D+V W ++ GYAK+ + ++A +LF
Sbjct: 188 VVTWNSMIGGLVRCGELEGACKLFDEMPERDMVSWNTMLDGYAKAGE-MDRAFELF---- 242
Query: 210 ESGENMP--NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
E MP N ++ +++ ++ G +V L +C + + + +I Y
Sbjct: 243 ---ERMPQRNIVSWSTMVCGYSKGGDMDMARV---LFDRCPAK-NVVLWTTIIAGYAEKG 295
Query: 268 AFDGAMRVYDRLENPCLNASNSLI---------NGLISMGRIEDAELIFNRLTEANSISY 318
A +Y ++E L + + +G++ +G+ A + R +
Sbjct: 296 FVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKV-L 354
Query: 319 NSMIKGYAVYGQVDDSKRLFEK-MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
N+ I YA G +D + +F M + ++S N+MI G+ +
Sbjct: 355 NAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMI-----------------QGFAMHG 397
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVG 436
EKAL+L+ M + TF L AC+ G + +G+ + K V
Sbjct: 398 HGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHY 457
Query: 437 TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
++D+ R G + +A S+ PN L+N H
Sbjct: 458 GCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMH 499
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 100/234 (42%), Gaps = 18/234 (7%)
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
H CS L S+ Q +HA ++K +++V L+ +S C + A F+ + PNV
Sbjct: 28 LHKCSNLDSVNQ---IHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNV 84
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEI---MLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+ +++ ++H+ S L F M + + P+ T+ +L AC + I
Sbjct: 85 HLYNSIIRAHAHN--TSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMI 142
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGH--LHEAEEFIKDMPIELDAVVWGALLSACWFW 579
++ +G + ++D R G L A M E D V W +++
Sbjct: 143 HAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMK-ERDVVTWNSMIGGL--- 198
Query: 580 MNMEVGE-RAAQKMFG-LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
+ GE A K+F + ++ + ++ + + YA G+ + ++ +R+ +
Sbjct: 199 --VRCGELEGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNI 250
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 212/691 (30%), Positives = 330/691 (47%), Gaps = 59/691 (8%)
Query: 5 ATQSQTLMTQE-TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
A +Q L T + + TN + + G +V A+ +F+ + + VVSWN ++ GYS+
Sbjct: 31 AIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKG 90
Query: 64 KFDES--LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
S + L M N N TFS + + + G Q H L +K+ FV
Sbjct: 91 TVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFV 150
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
GS L+ Y + +A++VFD + P+++
Sbjct: 151 GSSLINMYCKIGCMLDARKVFDTI-------------------------------PERNT 179
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
V W +ISGYA E A +LF MR E +++ + SV+ A GK +H
Sbjct: 180 VSWATIISGYAMERMAFE-AWELFXLMRRE-EGAHDKFIYTSVLSALTVPDLVHYGKQIH 237
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
L +K G S+G AL+ Y C D A++ ++ + +++I G G
Sbjct: 238 CLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSH 297
Query: 302 DA-ELIFNRLTEANSIS---YNSMIKGYAVYGQVDDSKRL----FEKMPHRSIISLNTMI 353
+A L +N N S + +I + G +++ K++ + I + ++
Sbjct: 298 EALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALV 357
Query: 354 SVIPE--------------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+ + E + V W SMISGY QN +E AL LY M+ I
Sbjct: 358 DMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHEL 417
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T + + ACS L +L+QG+ +HA +K F V +G++L MY++CGS+ D F +
Sbjct: 418 TMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRM 477
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
S ++ W A+++G S +G G +A+ LFE + P+ TFV VLSAC GLV G
Sbjct: 478 PSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGK 537
Query: 520 KIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
FR M +G+VP +EHY C+VD+L R+G LHE +EFI+ I+ +W LL AC
Sbjct: 538 VYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRN 597
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
+ N E+G A +K+ L + SAY++LS+IY LG+ +R+ + V K+PGCS
Sbjct: 598 YRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCS 657
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
WIEL S+VH F V D+ +P I + L L
Sbjct: 658 WIELKSQVHVFVVGDQIHPQIVKICSELRRL 688
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 236/531 (44%), Gaps = 64/531 (12%)
Query: 68 SLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLF 127
+L L+ HRS F +L C + L GK IH +L++G ++ + L+
Sbjct: 2 NLYLLPPQHRS--------FVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVN 53
Query: 128 FYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKL 187
YA C I +AK VF+ + + + W+ ++ GY Q
Sbjct: 54 LYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQ------------------------- 88
Query: 188 ISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
K G ++LF+ MR +PN +TF V A + G H L IK
Sbjct: 89 -----KGTVGYSFVMELFQRMRAE-NTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKT 142
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI--EDAEL 305
+D +G +LI YC A +V+D + + ++I+G +M R+ E EL
Sbjct: 143 SNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGY-AMERMAFEAWEL 201
Query: 306 I-FNRLTEA--NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--- 359
R E + Y S++ V V K++ ++S+ ++ + + M
Sbjct: 202 FXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGK 261
Query: 360 ---------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+++ +TW++MI+GY Q +AL L+ M + TF +
Sbjct: 262 CGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGV 321
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
+ACS +G+L++G+ +H + +K +E +Y T+LVDMY++CGS+ DA+ F + P++
Sbjct: 322 INACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDI 381
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
WT++++GY+ +G A+ L+ M + I+P+ T VL AC + +G +I
Sbjct: 382 VLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQ 441
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
YG + + + + + G L + + MP D + W A++S
Sbjct: 442 TIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSR-DIMTWNAMISG 491
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 212/687 (30%), Positives = 342/687 (49%), Gaps = 85/687 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQ--MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N I + G L AR LFD M VSWN+++ + + E+LSL M
Sbjct: 187 NALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVG 246
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V+ N TF + L C + G+ IH ++LKS + +V + L+ YANC ++E
Sbjct: 247 VESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQME--- 303
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
DA VF M KD V W L+SG ++ D
Sbjct: 304 ----------------------------DAERVFKSMLFKDCVSWNTLLSGMVQN-DMYS 334
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
A+ F+ M++SG+ P++ + ++I A R G VH IK G + + IG +L
Sbjct: 335 DAINHFQDMQDSGQK-PDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSL 393
Query: 260 IEFY--CGCEAFDGAMRVY--------------DRLENPC-LNASNSLINGLISMGRIE- 301
I+ Y C C + G+ Y +N C L+A N L + + +++
Sbjct: 394 IDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRK--VQLEKMDV 451
Query: 302 DAELIFNRLTEANSISYNSMIK---GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE 358
D +I + L + + +IK GY + G + D I+ N +++V E
Sbjct: 452 DPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLAD------------ILIQNAIVNVYGE 499
Query: 359 M--------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+ ++ V+W SMI+ V N L +AL+L+ ++ + I+ T +
Sbjct: 500 LALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSV 559
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
+A + L SL++G+ +H L++ F + SLVDMY+RCG++ +A+ F+ + ++
Sbjct: 560 LYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDL 619
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
WT+++N HG G +A+ LF M +++++P+ TF+ +L AC +GLV EG + F
Sbjct: 620 ILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEI 679
Query: 525 MKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
MK+ Y + P EHY C+VDLL RS L EA F+++MPIE A VW ALL AC N +
Sbjct: 680 MKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNND 739
Query: 584 VGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELN 643
+GE AA+K+ L+ + YV++SN +A G+W ++R + ++KK PGCSWIE+
Sbjct: 740 LGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVE 799
Query: 644 SRVHAFSVEDRNNPNCNVIYATLEHLT 670
+++H F D+++P CN IY L T
Sbjct: 800 NKIHTFMARDKSHPQCNNIYLKLAQFT 826
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 142/569 (24%), Positives = 253/569 (44%), Gaps = 55/569 (9%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G A +FD+M RT+ +WN M+ ++ E++ L M V L+ TF
Sbjct: 93 GKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFP 152
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L C G +IH + +K GY F FV + L+ YA C ++ A+ +FD
Sbjct: 153 CVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDS---- 208
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
G M K D V W +IS + + E AL LFR M
Sbjct: 209 ----------GL---------------MEKDDPVSWNSIISAHVGEGESLE-ALSLFRRM 242
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+E G N YTF S ++AC G+ +H +++K D + ALI Y C
Sbjct: 243 QEVGVE-SNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQ 301
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMI-- 322
+ A RV+ + + N+L++G++ DA F + ++ + +S +MI
Sbjct: 302 MEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAA 361
Query: 323 -------------KGYAVYGQVDDSKRLFEKM--PHRSIISLNTMISVIPEM-ERNPVTW 366
YA+ +D + + + + + M S M E++ ++W
Sbjct: 362 SGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISW 421
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
++I+GY QN H AL L ++ +D + ACS L S + + +H +++K
Sbjct: 422 TTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLK 481
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+++ + ++V++Y ++ A+ F SI+S ++ +WT+++ H+GL EA+ L
Sbjct: 482 GGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALEL 540
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
F ++E +I P+ T V VL A + +G +I + G +VD+ R
Sbjct: 541 FNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYAR 600
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + A I + + D ++W ++++A
Sbjct: 601 CGTMENARN-IFNYVKQRDLILWTSMINA 628
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/544 (22%), Positives = 244/544 (44%), Gaps = 112/544 (20%)
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKS-GYECFEFVGSGLLFFYANCFEIEEAKRVF 142
+ +S L +CA +L G+Q+H LK+ Y F+ + + Y C +A +VF
Sbjct: 46 QQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVF 105
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
D KM ++ + W +I G S +A+
Sbjct: 106 D-------------------------------KMSERTIFTWNAMI-GACVSAGRYVEAI 133
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV---VHGLLIKCGFEFDESIGGAL 259
+L++ MR G ++ + +TF V++AC GAF E ++ +HG+ +KCG+ + AL
Sbjct: 134 ELYKEMRVLGVSL-DAFTFPCVLKAC---GAFKERRLGCEIHGVAVKCGYGGFVFVCNAL 189
Query: 260 IEFYCGCEAFDGAMRVYDR--LENPCLNASNSLINGLISMGRIEDAELIFNRL----TEA 313
I Y C GA ++D +E + NS+I+ + G +A +F R+ E+
Sbjct: 190 IAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVES 249
Query: 314 NSISY-----------------------------------NSMIKGYAVYGQVDDSKRLF 338
N+ ++ N++I YA GQ++D++R+F
Sbjct: 250 NTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVF 309
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
+ M + ++ V+WN+++SG VQN+++ A+ + M+ +
Sbjct: 310 KSM-----------------LFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQ 352
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
+ + A +L G +HA+ +K +SN+++G SL+DMY +C + ++F
Sbjct: 353 VSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEY 412
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAV-LLFEIMLEQ-DIVPNAATFVG-VLSACVRAGLV 515
+ ++ +WT ++ GY+ + +A+ LL ++ LE+ D+ P +G +L AC +GL
Sbjct: 413 MPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDP---MMIGSILLAC--SGLK 467
Query: 516 NEGMKIFRSMKSY---GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+E K+ + + Y G + + +V++ G + A + + + D V W ++
Sbjct: 468 SE--KLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSK-DIVSWTSM 524
Query: 573 LSAC 576
++ C
Sbjct: 525 ITCC 528
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/498 (20%), Positives = 205/498 (41%), Gaps = 67/498 (13%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
T + +N I GQ+ A +F M + VSWNT+L G + + ++++ M
Sbjct: 284 TDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDM 343
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
S K ++ + +++ + +L+ G ++H +K G + +G+ L+ Y C +
Sbjct: 344 QDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCV 403
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF--IKMPKKDVVVWTKLISGYAK 193
+ F+ + E + + W+ ++ GY Q DA ++ +++ K DV
Sbjct: 404 KYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDV------------ 451
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ S++ AC+ L + K +HG ++K G D
Sbjct: 452 -----------------------DPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLA-DI 487
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
I A++ Y D A V++ + + + + S+I + G +A +FN L E
Sbjct: 488 LIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIET 547
Query: 314 N---------SISY-----NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
N S+ Y +S+ KG ++G + E + S++ + +
Sbjct: 548 NIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENA 607
Query: 360 --------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
+R+ + W SMI+ + + A+ L+ M + TF L +ACS
Sbjct: 608 RNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHS 667
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVG--TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWT 468
G + +G+ H ++K ++ + LVD+ +R S+ +A ++ P+ W
Sbjct: 668 GLVVEGK-QHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWC 726
Query: 469 ALMNG---YSHHGLGSEA 483
AL+ +S++ LG A
Sbjct: 727 ALLGACRIHSNNDLGEVA 744
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 201/660 (30%), Positives = 323/660 (48%), Gaps = 87/660 (13%)
Query: 20 STNKAITECGRN--GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ NK + C + G L A +F+ + ++ +N M+ Y+K + L L +
Sbjct: 131 TINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLRE 190
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + T+ +L L + G+++ ++K+G + +V + L+ Y +E
Sbjct: 191 DGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVEN 250
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AK++FDE M +D V W +ISGY +
Sbjct: 251 AKKLFDE-------------------------------MTTRDSVSWNVMISGYVR-CRR 278
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E A+ FR M++ G P+E T S + AC L G +H + K F I
Sbjct: 279 FEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-ELGFTTRIDN 337
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL++ Y C CLN + + IF+ ++ N I
Sbjct: 338 ALLDMYAKC---------------GCLNIARN----------------IFDEMSMKNVIC 366
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+ SMI GY G + +++ LF+K P R + V W +MI+GYVQ +
Sbjct: 367 WTSMISGYINCGDLREARDLFDKSPVRDV-----------------VLWTAMINGYVQFH 409
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+ A+ L+ M+ I + T L C+ LG+L+QG+ +H +L + +V VGT
Sbjct: 410 HFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGT 469
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+L++MYS+CG ++ + F + + A+WT+++ G + +G SEA+ LF M P
Sbjct: 470 ALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKP 529
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
+ TF+GVLSAC GLV EG + F SMK + + P +EHY CV+DLLGR+G L EAEE
Sbjct: 530 DDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEEL 589
Query: 557 IKDMPIELDAVV---WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
I+++PIE +V +GALLSAC N+++GER A+K+ ++ S + +L+NIYA +
Sbjct: 590 IQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASV 649
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+W +R+++ L VKK PGCS IE++ VH F V D ++P I + L +T L
Sbjct: 650 DRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMIEICSMLNRVTGQL 709
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 198/658 (30%), Positives = 339/658 (51%), Gaps = 54/658 (8%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
R +FD+M R VVSW ++L GYS + L M V N T ST+++
Sbjct: 147 GRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVN 206
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ G Q+H +V+K G+E EA VF+ L
Sbjct: 207 EGVVGIGLQVHAMVVKHGFE--------------------EAIPVFNSL----------- 235
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ Y + ++ DA DVF KM +D V W +I+GY ++ E ++F M+ +G P
Sbjct: 236 ISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLE-VFEIFNKMQLAGVK-P 293
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
TF SVI++CA L K++ +K GF D+ + AL+ C+ D A+ ++
Sbjct: 294 THMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLF 353
Query: 277 DRLENPCLNAS-NSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK-GYAVY-- 328
+E S ++I+G + G + A +F+++ + N +Y++++ Y V+
Sbjct: 354 SLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVS 413
Query: 329 -GQVDDSKRLFEKMPH------RSIISLNTMISVIPEME----RNPVTWNSMISGYVQNN 377
+ K +E+ + + L I + E ++ + W++M++GY Q
Sbjct: 414 EMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTG 473
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHAC-SCLGSLQQGQLLHAHLVKTPFESNVYVG 436
E+A +L+ + K I TFS + +AC S + +QG+ HA+ +K + + V
Sbjct: 474 ETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVS 533
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
++LV MY++ G+I+ A F ++ +W ++++GYS HG +A+ +F+ M ++++
Sbjct: 534 SALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMD 593
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
+A TF+GV++AC AGLV +G K F SM + + PT++HY+C++DL R+G L +A
Sbjct: 594 VDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMG 653
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
I +MP A VW LL A N+E+GE AA+K+ L + +AYV+LSN+YA G
Sbjct: 654 IINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGN 713
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
W ++ ++RK + +VKK+PG SWIE+ ++ ++F D +P N IY+ L L+ L
Sbjct: 714 WQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRL 771
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 157/569 (27%), Positives = 266/569 (46%), Gaps = 72/569 (12%)
Query: 37 ARNLFDQMPIR--TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVC 94
A NLFD++P R T+ N +L YS+ + E+L+L ++ S+++ +E+T S + ++C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 95 AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
A G+Q+HC +K G VG+ L+ Y + + +RVFDE+ E
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGE------- 156
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL-KLFRWMRESGE 213
++VV WT L++GY S +G + +LF M+ G
Sbjct: 157 ------------------------RNVVSWTSLLAGY--SWNGLYGYVWELFCQMQYEGV 190
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
+PN YT +VI A G G VH +++K GFE + +LI Y A
Sbjct: 191 -LPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDAR 249
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYG 329
V+D++E NS+I G + G+ + IFN++ + +++ S+IK A
Sbjct: 250 DVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLR 309
Query: 330 QVDDSKRLFEKMPHRS-------IISLNTMISVIPEME------------RNPVTWNSMI 370
++ K + K I +L +S EM+ +N V+W +MI
Sbjct: 310 ELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMI 369
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
SG +QN +++A+ L+ MR+ + T+S + + + +HA ++KT +E
Sbjct: 370 SGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSE----MHAEVIKTNYE 425
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+ VGT+L+D Y + G+ DA F I + ++ AW+A++ GY+ G EA LF +
Sbjct: 426 RSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQL 485
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGR 546
+++ I PN TF V++AC E K F +Y + L + CV V + +
Sbjct: 486 IKEGIKPNEFTFSSVINACASPTAAAEQGKQFH---AYAIKMRLNNALCVSSALVTMYAK 542
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G++ A E K E D V W +++S
Sbjct: 543 RGNIDSAHEVFKRQK-ERDLVSWNSMISG 570
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 227/492 (46%), Gaps = 69/492 (14%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E I N I+ R G L AR++FD+M IR V+WN+M+ GY + + E + +
Sbjct: 226 EEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNK 285
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M + VK TF++++ CA L L K + C LKSG+ + V + L+ + C E
Sbjct: 286 MQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKE 345
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+++A +F SLM G K+VV WT +ISG ++
Sbjct: 346 MDDALSLF-----------SLMEEG-------------------KNVVSWTAMISGCLQN 375
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
G ++A+ LF MR G PN +T+ +++ F +H +IK +E S
Sbjct: 376 -GGNDQAVNLFSQMRREGVK-PNHFTYSAIL--TVHYPVFVSE--MHAEVIKTNYERSSS 429
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---- 310
+G AL++ Y A++V++ +E L A ++++ G G E+A +F++L
Sbjct: 430 VGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEG 489
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFE----KMPHRSIISLNTMISVI---------- 356
+ N +++S+I A + + F KM + + +++ + +
Sbjct: 490 IKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSA 549
Query: 357 -----PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
+ ER+ V+WNSMISGY Q+ +KAL+++ M+K +D TF + AC+
Sbjct: 550 HEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHA 609
Query: 412 GSLQQGQ-----LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVA 465
G +++GQ +++ H + + + ++D+YSR G + A + + P
Sbjct: 610 GLVEKGQKYFNSMINDHHINPTMKHY----SCMIDLYSRAGMLEKAMGIINEMPFPPGAT 665
Query: 466 AWTALMNGYSHH 477
W L+ H
Sbjct: 666 VWRTLLGAARVH 677
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 200/660 (30%), Positives = 323/660 (48%), Gaps = 87/660 (13%)
Query: 20 STNKAITECGRN--GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ NK + C + G L A +F+ + ++ +N M+ Y+K + L L +
Sbjct: 177 TINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLRE 236
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + T+ +L L + G+++ ++K+G + +V + L+ Y +E
Sbjct: 237 DGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVEN 296
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AK++FDE M +D V W +ISGY +
Sbjct: 297 AKKLFDE-------------------------------MTTRDSVSWNVMISGYVR-CRR 324
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E A+ FR M++ G P+E T S + AC L G +H + K F I
Sbjct: 325 FEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-ELGFTTRIDN 383
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL++ Y C CLN + + IF+ ++ N I
Sbjct: 384 ALLDMYAKC---------------GCLNIARN----------------IFDEMSMKNVIC 412
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+ SMI GY G + +++ LF+K P R + V W +MI+GYVQ +
Sbjct: 413 WTSMISGYINCGDLREARDLFDKSPVRDV-----------------VLWTAMINGYVQFH 455
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+ A+ L+ M+ + + T L C+ LG+L+QG+ +H +L + +V VGT
Sbjct: 456 HFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGT 515
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+L++MYS+CG ++ + F + + A+WT+++ G + +G SEA+ LF M P
Sbjct: 516 ALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKP 575
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
+ TF+GVLSAC GLV EG + F SMK + + P +EHY CV+DLLGR+G L EAEE
Sbjct: 576 DDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEEL 635
Query: 557 IKDMPIELDAVV---WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
I+++PIE +V +GALLSAC N+++GER A+K+ ++ S + +L+NIYA +
Sbjct: 636 IQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASV 695
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+W +R+++ L VKK PGCS IE++ VH F V D ++P I + L +T L
Sbjct: 696 DRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQL 755
>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Brachypodium distachyon]
Length = 689
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 203/663 (30%), Positives = 325/663 (49%), Gaps = 61/663 (9%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L AR +FD++P SWN++L + + L+ MH V N + L
Sbjct: 41 LAAARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQGVAANTFALGSSLRS 100
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
A G Q+ L KSG F S LL YA
Sbjct: 101 AAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYA----------------------- 137
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+C + DA VF MP+++ V W LI+GY +S +AL+LF M E+
Sbjct: 138 --------KCGRVRDARRVFDGMPERNTVSWNALIAGYVES-GKVLQALELFINM-ETER 187
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
+P+E TF +++ A F ++ HG ++K G ++ A I Y C A +
Sbjct: 188 LVPDEATFAALLTAFDDSNYFLMHQL-HGKIVKYGSALGLTVSNAAITAYSQCGALAESR 246
Query: 274 RVYDRL-ENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI-----SYNSMI----- 322
R++D++ ++ L + N+++ G DA F R+ + + S+ S+I
Sbjct: 247 RIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTCPE 306
Query: 323 ----KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME-----------RNPVTWN 367
+G A++G V + ++I++ T IS ME ++ V+WN
Sbjct: 307 HDDHQGRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWN 366
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
SM++GY Q+NL AL+ + M+ I FS +CS L LQ G+ +H ++ +
Sbjct: 367 SMLTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHS 426
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F SN +V +SL+ MYS+ G ++DA+ SF + W +++ GY+ HG LF
Sbjct: 427 GFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLF 486
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGR 546
M+E + + TFVG++++C AGLV+EG +I +M++ YG+ +EHY C VDL GR
Sbjct: 487 NEMVELKVPLDHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYACGVDLYGR 546
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G L +A+E I MP E DA+VW LL AC NME+ A + + K S Y++L
Sbjct: 547 AGQLEKAKELIDSMPFEPDAMVWMTLLGACRIHGNMELASEVASHLLVSEPKQHSTYILL 606
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
S++Y+ LG W + +++ + + + K PG SWIE+ + VH+F+ EDR++P + IY L
Sbjct: 607 SSMYSGLGMWSDRAIVQREMKNRGLSKVPGWSWIEVKNEVHSFNAEDRSHPRMDEIYEML 666
Query: 667 EHL 669
L
Sbjct: 667 SLL 669
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 189/442 (42%), Gaps = 63/442 (14%)
Query: 21 TNKAITECGRNGQLVTARNLFDQM-PIRTVVSWNTMLCGYSKWA-KFDESLSLVSTMHRS 78
+N AIT + G L +R +FDQ+ R ++SWN ML Y+ +D V + S
Sbjct: 229 SNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRES 288
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY----ANCFE 134
V+L+ +F++I+S C + + G+ IH LV+K+G E V + L+ Y NC
Sbjct: 289 GVQLDMYSFTSIISTCPEHDDH-QGRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCM- 346
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+E+A + FD L + + W+ ML GY Q NL +D
Sbjct: 347 MEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSAD-------------------------- 380
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
AL+ FR M +S +EY F + +R+C+ L G+ +HG +I GF +
Sbjct: 381 ------ALRFFRCM-QSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNF 433
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-- 312
+ +LI Y D A + ++ + NS+I G G +FN + E
Sbjct: 434 VSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELK 493
Query: 313 --ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
+ +++ +I + G VD+ + M R I L ME + +
Sbjct: 494 VPLDHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPL--------RMEH----YACGV 541
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH-LVKTPF 429
Y + EKA +L +M + + L AC G+++ + +H LV P
Sbjct: 542 DLYGRAGQLEKAKELIDSM---PFEPDAMVWMTLLGACRIHGNMELASEVASHLLVSEPK 598
Query: 430 ESNVYVGTSLVDMYSRCGSIND 451
+ + Y+ L MYS G +D
Sbjct: 599 QHSTYI--LLSSMYSGLGMWSD 618
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/465 (21%), Positives = 185/465 (39%), Gaps = 66/465 (14%)
Query: 153 WSLMLVGYVQCNL-MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ +L Y L ++ A VF ++P+ D W L++ + S A L R M
Sbjct: 27 WNQLLTAYSLSPLGLAAARRVFDEIPRPDAASWNSLLTAHV-SAGAHPAAWCLLRAMHAQ 85
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G N + S +R+ A G + L K G + AL+ Y C
Sbjct: 86 GV-AANTFALGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRD 144
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTE------------------ 312
A RV+D + + N+LI G + G++ A EL N TE
Sbjct: 145 ARRVFDGMPERNTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAALLTAFDD 204
Query: 313 ----------ANSISY---------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+ Y N+ I Y+ G + +S+R+F+++
Sbjct: 205 SNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGD---------- 254
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLG 412
R+ ++WN+M+ Y + + A+ ++ M R+ + +F+ + C
Sbjct: 255 ------SRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTCPEHD 308
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS---INDAQASFSSISSPNVAAWTA 469
QG+ +H ++K E V +L+ MY+R + DA F S+ + +W +
Sbjct: 309 D-HQGRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNS 367
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
++ GYS H L ++A+ F M +I + F L +C ++ G +I S+ G
Sbjct: 368 MLTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSG 427
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEA----EEFIKDMPIELDAVVWG 570
+ ++ + +SG L +A EE K + +++++G
Sbjct: 428 FASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFG 472
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 191/674 (28%), Positives = 334/674 (49%), Gaps = 63/674 (9%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G + A +F + VSW ++ +++ + E+L M ++ + F
Sbjct: 3 GKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFV 62
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV-GSGLLFFYANCFEIEEAKRVFDELHE 147
+ VC+ L G+ +H ++L++ F+ + G+ L+ YA C ++E A++ FDE
Sbjct: 63 VAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE--- 119
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
M KK +V W LI+GY+++ D ALK+++
Sbjct: 120 ----------------------------MGKKTLVTWNALIAGYSRNGDH-RGALKIYQD 150
Query: 208 M-RESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M +S E M P+ TF S + AC+ +G +G+ + + G+ D + ALI Y
Sbjct: 151 MVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSK 210
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSM 321
C + + A +V+DRL+N + A N++I+G G A +F R+ + N +++ +
Sbjct: 211 CGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGL 270
Query: 322 I----------KGYAVYGQVDDSK--------RLFEKMPHRSIISLNTMISVIPEME-RN 362
+ +G A++ +V + + M + SL V + R+
Sbjct: 271 LTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRD 330
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
+TWN +I YVQ + AL ++ M+ + T S + AC+ LG+ +QG+ +HA
Sbjct: 331 VITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHA 390
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+ +++V + SL++MY+RCGS++D F++I ++ +W+ L+ Y+ HG
Sbjct: 391 LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRT 450
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVV 541
+ F +L++ + + T V LSAC G++ EG++ F SM +G+ P H+ C+V
Sbjct: 451 GLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMV 510
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK-PI 600
DLL R+G L AE I DMP DAV W +LLS C + + R A K+F L+ +
Sbjct: 511 DLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEH 570
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
S +LSN+YA G+W D+RK +K+PGCS+IE+N VH F D+++P
Sbjct: 571 STVTLLSNVYAEAGRWD---DVRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEE 627
Query: 661 VIYATLEHLTANLN 674
+I A ++ L+ +
Sbjct: 628 LIAAEIKRLSKQMK 641
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 184/389 (47%), Gaps = 29/389 (7%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y +C ++DA VF + + V WT +++ +A++ +AL +R M G P+
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARN-GHYREALGYYRRMVLEGLR-PDGA 59
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
F I C+ +G+++H ++++ EFD +G ALI Y C + A + +D
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLT-------EANSISYNSMIKGYAVYGQV 331
+ L N+LI G G A I+ + + ++I+++S + +V G +
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179
Query: 332 DDSKRLFEKM-----PHRSII------------SLNTMISVIPEME-RNPVTWNSMISGY 373
+ + + SI+ SL + V ++ R+ + WN+MISGY
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
+ +AL+L+ M TF L AC+ L L+QG+ +H + + +ES++
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299
Query: 434 YVGTSLVDMYSRC-GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
+G L++MY++C S+ +A+ F + + +V W L+ Y +G +A+ +F+ M
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+++ PN T VLSAC G +G +
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAV 388
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 183/411 (44%), Gaps = 58/411 (14%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
+ N I + G L +AR +FD++ R V++WNTM+ GY+K ++L L M +
Sbjct: 199 IVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPN 258
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC-FEIEE 137
+ K N TF +L+ C L L G+ IH V + GYE +G+ LL Y C +EE
Sbjct: 259 DPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEE 318
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++VF+ L + + W++++V YVQ DA D+F +M ++V
Sbjct: 319 ARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVA--------------- 363
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
PNE T +V+ ACA LGA +GK VH L+ + D +
Sbjct: 364 ------------------PNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLEN 405
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTE---A 313
+L+ Y C + D + V+ + + L + ++LI G E + L E A
Sbjct: 406 SLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAA 465
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKM--------PHRSIISLNTMISVIPEMER---- 361
+ ++ S + + G + + + F M +R + + ++S +E
Sbjct: 466 DDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENL 525
Query: 362 --------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+ V W S++SG +N ++A ++ + +L + ST ++L
Sbjct: 526 IHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLL 576
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY +CGS+ DA A F +I PN +WT ++ ++ +G EA+ + M+ + + P+ A
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 502 FVGVLSACVRAGLVNEG 518
FV + C + + +G
Sbjct: 61 FVVAIGVCSSSKDLKQG 77
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 196/642 (30%), Positives = 312/642 (48%), Gaps = 115/642 (17%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+AR +FD+M + +V+W M+ YS+ D+++ L + S ++ T +++LS C
Sbjct: 200 SARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACV 259
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+L GKQ+H V++SG FVG L+ YA +E ++++F+ + N
Sbjct: 260 ELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHN------ 313
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
V+ WT LISGY +S ++A+KLF M G
Sbjct: 314 -------------------------VMSWTALISGYVQSRQE-QEAIKLFCNMLH-GHVT 346
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN +TF SV++ACA L F GK +HG IK G +G
Sbjct: 347 PNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVG------------------- 387
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
NSLIN G +E A FN L E N ISYN+ A +D +
Sbjct: 388 ------------NSLINMYARSGTMECARKAFNILFEKNLISYNTAADANA--KALDSDE 433
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
++ H + + +P T+ ++SG
Sbjct: 434 SFNHEVEHTGVGA-------------SPFTYACLLSG----------------------- 457
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
+C+G++ +G+ +HA +VK+ F +N+ + +L+ MYS+CG+ A
Sbjct: 458 ------------AACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQV 505
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F+ + NV WT++++G++ HG ++A+ LF MLE + PN T++ VLSAC GL+
Sbjct: 506 FNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLI 565
Query: 516 NEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+E K F SM ++ + P +EHY C+VDLLGRSG L EA EFI MP + DA+VW L
Sbjct: 566 DEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLG 625
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
+C N ++GE AA+K+ + + Y++LSN+YA G+W +RK + ++ K+
Sbjct: 626 SCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKE 685
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
G SWIE++++VH F V D ++P IY L+ L + ++
Sbjct: 686 TGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNL 727
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 208/497 (41%), Gaps = 107/497 (21%)
Query: 22 NKAITECGRNGQLVTARNLFDQM--PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH--- 76
N IT + G A ++F M R +VSW+ ++ ++ + ES +L++ +H
Sbjct: 78 NSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSM--ESRALLTFLHMLQ 135
Query: 77 --RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY-ECFEFVGSGLL-FFYANC 132
R+ + NE F+ +L C+ G I +LK+GY + VG L+ F
Sbjct: 136 CSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGG 195
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM------PKK------- 179
+I+ A+ VFD++ N + W+LM+ Y Q L+ DA D+F ++ P K
Sbjct: 196 LDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLL 255
Query: 180 --------------------------DVVVWTKLISGYAKSVDGCEKALKLFRWM----- 208
DV V L+ YAKS E + K+F M
Sbjct: 256 SACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSA-AVENSRKIFNTMLHHNV 314
Query: 209 -------------RESGE------NM------PNEYTFDSVIRACARLGAFCEGKVVHGL 243
R+ E NM PN +TF SV++ACA L F GK +HG
Sbjct: 315 MSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQ 374
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA 303
IK G +G +LI Y + A + ++ L L + N+ + + + D+
Sbjct: 375 TIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAAD---ANAKALDS 431
Query: 304 ELIFNRLTE-----ANSISYNSMIKGYAVYGQVDDSKRLFEKMP----------HRSIIS 348
+ FN E A+ +Y ++ G A G + +++ + + ++IS
Sbjct: 432 DESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALIS 491
Query: 349 L-------NTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+ + V +M RN +TW S+ISG+ ++ KAL+L+ M ++ + T
Sbjct: 492 MYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVT 551
Query: 401 FSVLFHACSCLGSLQQG 417
+ + ACS +G + +
Sbjct: 552 YIAVLSACSHVGLIDEA 568
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 207/474 (43%), Gaps = 69/474 (14%)
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKM--PKKDVVVWTKLISGYAKSVDGCEKALKLF 205
D+ LL SL+ + Y +C +A +F M K+D+V W+ +IS +A + +AL F
Sbjct: 73 DSVLLNSLITL-YSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSME-SRALLTF 130
Query: 206 RWMRESGENM--PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES--IGGALIE 261
M + N+ PNEY F +++R+C+ F G + L+K G+ FD +G ALI+
Sbjct: 131 LHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGY-FDSHVCVGCALID 189
Query: 262 FYC-GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL--TEANSISY 318
+ G A V+D++++ L +I +G ++DA +F RL +E +
Sbjct: 190 MFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKF 249
Query: 319 N-------------------------------------SMIKGYAVYGQVDDSKRLFEKM 341
+++ YA V++S+++F M
Sbjct: 250 TLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTM 309
Query: 342 PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
H +++S W ++ISGYVQ+ ++A++L+ M + TF
Sbjct: 310 LHHNVMS-----------------WTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTF 352
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
S + AC+ L G+ LH +K + VG SL++MY+R G++ A+ +F+ +
Sbjct: 353 SSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFE 412
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
N+ ++ + + L S+ E+ + + T+ +LS G + +G +I
Sbjct: 413 KNLISYNTAADANA-KALDSDESFNHEVE-HTGVGASPFTYACLLSGAACIGTIVKGEQI 470
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G L ++ + + G+ A + DM + + W +++S
Sbjct: 471 HALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYR-NVITWTSIISG 523
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 150/318 (47%), Gaps = 25/318 (7%)
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMI 322
E+ A+ D L S+ L+ I G +E +L+ ++L ++ +S+ NS+I
Sbjct: 22 ESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLI 81
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
Y+ G +++ +F M H +R+ V+W+++IS + N++ +A
Sbjct: 82 TLYSKCGDWENALSIFRNMGHH---------------KRDLVSWSAIISCFANNSMESRA 126
Query: 383 LQLYMTMRKLA---IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP-FESNVYVGTS 438
L ++ M + + I F+ L +CS G + A L+KT F+S+V VG +
Sbjct: 127 LLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCA 186
Query: 439 LVDMYSRCG-SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
L+DM+++ G I A+ F + N+ WT ++ YS GL +AV LF +L + P
Sbjct: 187 LIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTP 246
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
+ T +LSACV + G ++ + G+ + +VD+ +S + + +
Sbjct: 247 DKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIF 306
Query: 558 KDMPIELDAVVWGALLSA 575
M + + + W AL+S
Sbjct: 307 NTM-LHHNVMSWTALISG 323
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 145/337 (43%), Gaps = 47/337 (13%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
++ + +R +F+ M V+SW ++ GY + + E++ L M +V N TFS
Sbjct: 294 AKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFS 353
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++L CA L GKQ+H +K G VG+ L+ YA +E A++ F+ L E
Sbjct: 354 SVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEK 413
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N L+ Y N +DA AK++D E F
Sbjct: 414 N-------LISY---NTAADA---------------------NAKALDSDES----FNHE 438
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
E + +T+ ++ A +G +G+ +H L++K GF + I ALI Y C
Sbjct: 439 VEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGN 498
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKG 324
+ A++V++ + + S+I+G G A +F + E N ++Y +++
Sbjct: 499 KEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSA 558
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
+ G +D++ + F M + IS P ME
Sbjct: 559 CSHVGLIDEAWKHFNSMHYNHSIS--------PRMEH 587
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 188/656 (28%), Positives = 319/656 (48%), Gaps = 102/656 (15%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL---VSTMHRSNVKLNETTFS 88
L AR +FD++P +WNT++ Y+ D LS+ + + S N+ TF
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFP 135
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++ A+++SL G+ +H + +KS FV + L+ Y +C +++ A +VF + E
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 195
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ M+ G+VQ A ++F KM +DV
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKA------------------------- 230
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ T V+ ACA++ G+ V + + + ++ A+++ Y C +
Sbjct: 231 --------SHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
+ A R++D +E E +++++ +M+ GYA+
Sbjct: 283 IEDAKRLFDAME-------------------------------EKDNVTWTTMLDGYAIS 311
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN--------LHE 380
+ ++ + MP + I V WN++IS Y QN HE
Sbjct: 312 EDYEAAREVLNSMPQKDI-----------------VAWNALISAYEQNGKPNEALIVFHE 354
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
LQ M + ++ + T S AC+ +G+L+ G+ +H+++ K N +V ++L+
Sbjct: 355 LQLQKNMKLNQITLVSTLS-------ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
MYS+CG + ++ F+S+ +V W+A++ G + HG G+EAV +F M E ++ PN
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
TF V AC GLV+E +F M+S YG+VP +HY C+VD+LGRSG+L +A +FI+
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEA 527
Query: 560 MPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKK 619
MPI VWGALL AC N+ + E A ++ L+ + A+V+LSNIYA LGKW
Sbjct: 528 MPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENV 587
Query: 620 MDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
++RK + +KK+PGCS IE++ +H F D +P +Y L + L S
Sbjct: 588 SELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKS 643
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 12/133 (9%)
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM--YSRCGSINDA 452
+ RS L C L L+Q H H+++T S+ Y + L M S S+ A
Sbjct: 27 NNERSRHISLIERCVSLRQLKQ---THGHMIRTGTFSDPYSASKLFAMAALSSFASLEYA 83
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVL----LFEIMLEQDIVPNAATFVGVLSA 508
+ F I PN AW L+ Y+ G + VL +++ E PN TF ++ A
Sbjct: 84 RKVFDEIPKPNSFAWNTLIRAYAS---GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKA 140
Query: 509 CVRAGLVNEGMKI 521
++ G +
Sbjct: 141 AAEVSSLSLGQSL 153
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 192/645 (29%), Positives = 319/645 (49%), Gaps = 82/645 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM--HRS 78
T K + RN A ++FD MP+R + SW +L Y + F+E+ L +
Sbjct: 86 TTKLLQMYARNCSFENACHVFDTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGV 145
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
V+L+ F +L +C L ++ G+Q+H + LK +++ A
Sbjct: 146 RVRLDFFVFPVVLKICCGLCAVELGRQMHGMALKHD------------------GDMKSA 187
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKS 194
+F + ++ M+ GY + + A ++F +M +KD + W +ISGY
Sbjct: 188 FEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGY--- 244
Query: 195 VDGC--EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
VDG ++A LFR + + G P+ +T SV+ CA + + GK H L I G + +
Sbjct: 245 VDGSLFDEAYSLFRDLLKEGIE-PDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSN 303
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT- 311
+GGAL+E Y C+ A +D + L N+LI+G + E + ++
Sbjct: 304 SIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRR 363
Query: 312 ---EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
E N ++N +I GY Q D + +LF +M + ++ P++
Sbjct: 364 DGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEM---------QIANLRPDI--------- 405
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
T ++ ACS L ++Q+G+ +HA+ ++
Sbjct: 406 ------------------------------YTVGIILAACSRLATIQRGKQVHAYSIRAG 435
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
+S+V++G +LVDMY++CG + ++ IS+PN+ + A++ Y+ HG G E + LF
Sbjct: 436 HDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFR 495
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548
ML + P+ TF+ VLS+CV AG + G + M +Y V+P+L+HYTC+VDLL R+G
Sbjct: 496 RMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMVAYNVMPSLKHYTCMVDLLSRAG 555
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L+EA E IK++P E DAV W ALL C+ +++GE AA+K+ L+ YV+L+N
Sbjct: 556 QLYEAYELIKNLPTEADAVTWNALLGGCFIHNEVDLGEIAAEKLIELEPNNPGNYVMLAN 615
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
+YA GKW R+ + + ++K PGCSWIE +H F +D
Sbjct: 616 LYASAGKWHYLTQTRQLMKDMGMQKRPGCSWIEDRDGIHVFVAKD 660
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 150/300 (50%), Gaps = 10/300 (3%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTV----VSWNTMLCGYSKWAKFDESLSLVST 74
S N I NG L A+ LFD+M V +SWN+M+ GY + FDE+ SL
Sbjct: 200 ASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRD 259
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
+ + ++ + T ++L+ CA + S+ GK+ H L + G + VG L+ Y+ C +
Sbjct: 260 LLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQD 319
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK----KDVVVWTKLISG 190
I A+ FD + E + W+ ++ GY +CN ++ KM + +V W +I+G
Sbjct: 320 IVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAG 379
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
Y ++ + A++LF M+ + P+ YT ++ AC+RL GK VH I+ G +
Sbjct: 380 YVENKQ-YDSAMQLFTEMQIANLR-PDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHD 437
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
D IG AL++ Y C RVY+ + NP L + N+++ G E+ +F R+
Sbjct: 438 SDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRM 497
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ +T++ + +C GS G+ LHAH +K+ F ++ +V T L+ MY+R S +A F
Sbjct: 50 SSTTYASILDSC---GSPILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVF 106
Query: 457 SSISSPNVAAWTALMNGY 474
++ N+ +WTAL+ Y
Sbjct: 107 DTMPLRNLHSWTALLRVY 124
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 194/651 (29%), Positives = 318/651 (48%), Gaps = 83/651 (12%)
Query: 29 GRNGQ--LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
GR G L AR +FD++P ++N+++ YS E+L L + R + NE T
Sbjct: 50 GRAGDVALCHARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFT 109
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+L C++ + H + +K GY FVG+ LL A+ + +++R+F E+
Sbjct: 110 LPFVLKACSRARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEM- 168
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
P ++VV W +I G A++ + E A LFR
Sbjct: 169 -----------------------------APHRNVVSWNTMIGGCAQAGETSE-ACALFR 198
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
MR G + + +TF S++ C++ G G++VH ++ G D +G AL++ Y C
Sbjct: 199 EMRRQGV-LADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKC 257
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
G + A F+ + N +S+ SM+ A
Sbjct: 258 -------------------------------GDLWMAHRCFDVMPIKNVVSWTSMLCALA 286
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
+G VD ++ FE+MP ERN ++WN+MIS YVQ + L LY
Sbjct: 287 KHGSVDAARDWFEQMP-----------------ERNIISWNAMISCYVQGGRFPETLGLY 329
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
M+ L + T + + G L G+++H ++ + + V V SL+DMY+RC
Sbjct: 330 NRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARC 389
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G ++ + + F+ + + N +W ++ + HG EAV+ F M+ P+ TFVG+L
Sbjct: 390 GQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLL 449
Query: 507 SACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
SAC GL+ +G F++M+ Y V P +EHY C+VDLLGR GHL +A + IKDMP++ D
Sbjct: 450 SACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPD 509
Query: 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKR 625
VVWGAL+ AC ++E+G+ A +++ L+ +V++SN+ +W +RK
Sbjct: 510 VVVWGALIGACRIHGHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQWEDMKRLRKL 569
Query: 626 LTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ KKD G S IE+N+ +H F VED + + + IYA ++ L +L S+
Sbjct: 570 MRDRGTKKDMGVSSIEINNSIHEFGVEDIRHESSSQIYAAVDQLAYHLVSL 620
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 138/323 (42%), Gaps = 58/323 (17%)
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
P L AS ++G + A +F+R+ + + +YNS+I+ Y+ G ++ L +
Sbjct: 39 PQLVASYCALSGRAGDVALCHARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDV 98
Query: 342 PHRSII----------------------------------------------------SL 349
R I+ SL
Sbjct: 99 LRRGILPNEFTLPFVLKACSRARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSL 158
Query: 350 NTMISVIPEM--ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
+ EM RN V+WN+MI G Q +A L+ MR+ + TF L
Sbjct: 159 RDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLV 218
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CS G+L+ G+L+H H++ + ++ +G +LVDMY +CG + A F + NV +W
Sbjct: 219 CSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSW 278
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
T+++ + HG A FE M E++I+ ++ ++S V+ G E + ++ MKS
Sbjct: 279 TSMLCALAKHGSVDAARDWFEQMPERNII----SWNAMISCYVQGGRFPETLGLYNRMKS 334
Query: 528 YGVVPTLEHYTCVVDLLGRSGHL 550
G+ P V+ + G++G L
Sbjct: 335 LGLTPDEVTLAGVLSVHGQNGDL 357
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS + ++G + AR+ F+QMP R ++SWN M+ Y + +F E+L L + M
Sbjct: 275 VVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKS 334
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ +E T + +LSV Q L G+ IHC + S + V + L+ YA C +++
Sbjct: 335 LGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARCGQVDT 394
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+ +F E MP K+ + W +I A
Sbjct: 395 SISLFTE-------------------------------MPNKNTISWNVIIGALAMH-GR 422
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
++A+ FR M S P+E TF ++ AC+ G +G+
Sbjct: 423 AQEAVMFFRAM-VSDAFSPDEITFVGLLSACSHGGLLEDGQ 462
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 179/505 (35%), Positives = 274/505 (54%), Gaps = 27/505 (5%)
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
P ++VV WT L+SG A++ + F RE PN++TF V +A A L
Sbjct: 69 PARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREG--VAPNDFTFPCVFKAVASLRLPVT 126
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
GK +H L +KCG D +G + + YC D A +++D + L N+ I+ ++
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVT 186
Query: 297 MGRIEDAE---LIFNRLT-EANSISYNSMIK----------GYAVYGQVDDSKRLFEKMP 342
GR ++A + F R+ + NSI++ + G ++G V S +
Sbjct: 187 DGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSV 246
Query: 343 HRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+ +I I E +N V+W S+++ YVQN+ EKA LY+ RK +
Sbjct: 247 YNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIV 306
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ + S + AC+ + L+ G+ +HAH VK E N++VG++LVDMY +CG I D++
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQ 366
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI--VPNAATFVGVLSACVRA 512
+F + N+ +L+ GY+H G A+ LFE M + PN TFV +LSAC RA
Sbjct: 367 AFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRA 426
Query: 513 GLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
G V GMKIF SMKS YG+ P EHY+C+VD+LGR+G + +A EFIK MPI+ VWGA
Sbjct: 427 GAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGA 486
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
L +AC +G AA+ +F LD K +V+LSN +A G+W + +R+ + + +
Sbjct: 487 LQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGI 546
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNN 656
KK G SWI + ++VHAF +DR++
Sbjct: 547 KKGAGYSWITVKNQVHAFQAKDRSH 571
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 130/539 (24%), Positives = 207/539 (38%), Gaps = 96/539 (17%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+AR + P R VVSW +++ G ++ F +L M R V N+ TF + A
Sbjct: 60 SARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVA 119
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L + GKQIH L +K G FVG Y ++A+++FDE+ E N W+
Sbjct: 120 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
+ V +A + FI+ FR R G+
Sbjct: 180 YISNSVTDGRPKEAIEAFIE-----------------------------FR--RIGGQ-- 206
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF------ 269
PN TF + AC+ G +HGL+ + GF+ D S+ LI+FY C+
Sbjct: 207 PNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEII 266
Query: 270 -------------------------DGAMRVYDRLENPCLNASNSLINGLIS-------- 296
+ A +Y R + S+ +I+ ++S
Sbjct: 267 FAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGL 326
Query: 297 -MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
+GR A + E N ++++ Y G ++DS++ F++MP
Sbjct: 327 ELGRSIHAHAV-KACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMP------------- 372
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLY--MTMRKLAIDRTRSTFSVLFHACSCLGS 413
E+N VT NS+I GY + AL L+ M R TF L ACS G+
Sbjct: 373 ----EKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGA 428
Query: 414 LQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
++ G + + T E + +VDM R G + A + P ++ W AL
Sbjct: 429 VENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQ 488
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
N HG +L E + + D ++ V + + AG E + MK G+
Sbjct: 489 NACRMHGKPHLGILAAENLFKLD-PKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGI 546
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T + N I G+ Q+ ++ +F +M ++ VSW +++ Y + + +++ L
Sbjct: 241 DTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLR 300
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
+ V+ ++ S++LS CA + L G+ IH +K+ E FVGS L+ Y C
Sbjct: 301 SRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGC 360
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
IE++++ FDE MP+K++V LI GYA
Sbjct: 361 IEDSEQAFDE-------------------------------MPEKNLVTLNSLIGGYAHQ 389
Query: 195 VDGCEKALKLFRWMRESG-ENMPNEYTFDSVIRACARLGAFCEG 237
+ AL LF M G PN TF S++ AC+R GA G
Sbjct: 390 -GQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENG 432
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKT------PFESNVYVGTSLVDMYSRCGSIN 450
T +L S++ G+++HA +VKT PF +N L++MYS+
Sbjct: 5 TADALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANY-----LINMYSKLDHPE 59
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A+ + NV +WT+L++G + +G S A+ F M + + PN TF V A
Sbjct: 60 SARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVA 119
Query: 511 RAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
L G +I G + + D+ ++ +A + ++P E + W
Sbjct: 120 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP-ERNLETWN 178
Query: 571 ALLS 574
A +S
Sbjct: 179 AYIS 182
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 175/508 (34%), Positives = 275/508 (54%), Gaps = 34/508 (6%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A VF ++P+++ W +I A++ D AL +F M PN++TF SV++AC
Sbjct: 68 ALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKAC 127
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A + EGK VHGLL+K G DE + L+ Y C + + A ++ R N
Sbjct: 128 AVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYR------NVEG 181
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
++ + ++ R E R E N + N M+ GYA G + ++ LF++M RS++S
Sbjct: 182 --VDDVRNLVRDE-------RGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVS 232
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHA 407
WN MISGY QN +++A++++ M ++ + R T + A
Sbjct: 233 -----------------WNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPA 275
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
S LG L+ G+ +H + K + +G++LVDMY++CGSI A F + NV W
Sbjct: 276 ISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITW 335
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
A++ G + HG ++ M + I P+ T++ +LSAC AGLV+EG F M
Sbjct: 336 NAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVN 395
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
S G+ P +EHY C+VDLLGR+G+L EAEE I +MP++ D V+W ALL A N+++G
Sbjct: 396 SVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGM 455
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
RAA+ + + AYV LSN+YA G W +R + ++++KDPGCSWIE++ +
Sbjct: 456 RAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVI 515
Query: 647 HAFSVEDRNNPNCNVIYATLEHLTANLN 674
H F VED ++ I++ LE ++ L+
Sbjct: 516 HEFLVEDDSHSRAKDIHSMLEEISNKLS 543
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 170/330 (51%), Gaps = 29/330 (8%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAK--FDESLSLVSTMHRSNVKLNETTFSTILSVC 94
A ++FDQ+P R +WNT++ ++ D L + + V+ N+ TF ++L C
Sbjct: 68 ALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKAC 127
Query: 95 AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF------------ 142
A + L +GKQ+H L+LK G EFV + LL Y C +E+A +F
Sbjct: 128 AVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRN 187
Query: 143 ---DEL-HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
DE E N +L ++M+ GY + + A ++F +M ++ VV W +ISGYA++
Sbjct: 188 LVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQN-GFY 246
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
++A+++F M + G+ +PN T SV+ A +RLG GK VH K D+ +G A
Sbjct: 247 KEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSA 306
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE------ 312
L++ Y C + + A++V++RL + N++I GL G+ D IFN L+
Sbjct: 307 LVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKAND---IFNYLSRMEKCGI 363
Query: 313 -ANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ ++Y +++ + G VD+ + F M
Sbjct: 364 SPSDVTYIAILSACSHAGLVDEGRSFFNDM 393
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+E +V N + R G L AR LFD+M R+VVSWN M+ GY++ + E++ +
Sbjct: 195 REFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFH 254
Query: 74 TMHR-SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M + +V N T ++L ++L L GK +H K+ + +GS L+ YA C
Sbjct: 255 RMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKC 314
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK 178
IE+A +VF+ L ++N + W+ ++ G +D F+ +M K
Sbjct: 315 GSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEK 360
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 268/506 (52%), Gaps = 50/506 (9%)
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
+F ++ K D+ + LI YA S + + A+ + M ES P+ +TF +++AC+ +
Sbjct: 91 LFYRIRKPDIFIANTLIRAYAFSPNPID-AVVFYSEMTESSVVFPDVHTFPLLLKACSEI 149
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
+ G+ +H + K G+ + S+ L++ Y C
Sbjct: 150 PSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASC------------------------- 184
Query: 292 NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
G IE A L+F+R E + S+N MI GY G ++R+FE MP R ++S
Sbjct: 185 ------GLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVS--- 235
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
W+ MI+GYVQ + ++ L L+ M I+ S AC+ L
Sbjct: 236 --------------WSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHL 281
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
G+++QGQ + ++ + V +GT+L+DMYS+CGS+ A F + NV AW+A++
Sbjct: 282 GAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMI 341
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGV 530
NG + +G G +A+ LF M Q + PN TF+G+L+AC + LV+EG F SM S YG+
Sbjct: 342 NGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGL 401
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
P H+ C+VDL GR+G L +A+ IK MP + ++ +WGALL+AC + E+GE+ +
Sbjct: 402 KPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGK 461
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
++ LD YV+LSNIYA G+W + ++R+ + +V K PGCS+I+L +H F
Sbjct: 462 RLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFV 521
Query: 651 VEDRNNPNCNVIYATLEHLTANLNSV 676
D ++P +IYA L ++ L +
Sbjct: 522 AGDSSHPQLEMIYAKLGEMSQELKAA 547
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 214/455 (47%), Gaps = 30/455 (6%)
Query: 3 LYATQSQTLMT---QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGY 59
L +QT+ T + + S + +G + AR LF ++ + NT++ Y
Sbjct: 51 LTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAY 110
Query: 60 SKWAKFDESLSLVSTMHRSNVKLNET-TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF 118
+ +++ S M S+V + TF +L C+++ SL G+ IH V K G+
Sbjct: 111 AFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSE 170
Query: 119 EFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK 178
V + L+ YA+C IE A VFD E + W++M+ GY++C + A +F MP
Sbjct: 171 VSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPD 230
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEG 237
+DVV W+ +I+GY + ++ L LF+ M GE + PNE + + ACA LGA +G
Sbjct: 231 RDVVSWSVMINGYVQE-SRFKEGLGLFQDMM--GEKIEPNESVLVNALSACAHLGAMEQG 287
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
+ + + + +G ALI+ Y C + + A+ V+ +++ + A +++INGL
Sbjct: 288 QWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAIN 347
Query: 298 GRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
G+ +DA +F+++ + N +++ ++ + VD+ F M
Sbjct: 348 GQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSM------------ 395
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
+ I ++ N M+ Y + + ++A + ++ + + + L +AC G
Sbjct: 396 TSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTV---IKSMPFKPNSAIWGALLNACRIHGD 452
Query: 414 LQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCG 447
+ G+ + L++ P YV L ++Y+ CG
Sbjct: 453 TELGEQVGKRLLELDPNHGGRYV--LLSNIYAACG 485
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 10/214 (4%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM--YSRCGSINDAQASFSS 458
+ +L H SC +L+ +HA + T S+ +V + ++ S GSI A+ F
Sbjct: 36 YPILRHLSSC-KTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYR 94
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV-PNAATFVGVLSACVRAGLVNE 517
I P++ L+ Y+ +AV+ + M E +V P+ TF +L AC +
Sbjct: 95 IRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRL 154
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
G I + G + +V + G L E+ + D E D W ++
Sbjct: 155 GEAIHSHVFKLGWSSEVSVSNFLVQMYASCG-LIESAGLVFDRTPECDGASWNIMIGG-- 211
Query: 578 FWMNMEVGERAAQKMF-GLDKKPISAYVILSNIY 610
++ V ++A++MF + + + ++ ++ N Y
Sbjct: 212 -YLKCGVF-KSARRMFEAMPDRDVVSWSVMINGY 243
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/624 (29%), Positives = 311/624 (49%), Gaps = 68/624 (10%)
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M + + ++ ++ + C ++ SL DG+ H
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFH--------------------------- 33
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
E+ +R + E L + +L Y +C ++DA VF +M ++++V W +IS YA+
Sbjct: 34 -EQMQRT---VKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAE- 88
Query: 195 VDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+G +K +F M E E PN T+ +R+ GK +H I+ G +
Sbjct: 89 -NGVFDKGFCMFSNMLEL-ETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNA 146
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-- 311
S+ A+ Y C +GA V++++ A ++ G R DA +F ++
Sbjct: 147 SVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNE 206
Query: 312 --EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN--TMISVIPEM-------- 359
E + ++ ++K A +++ F + H I+ L + +SV +
Sbjct: 207 GVELDEYVFSIVLKACAGLEELN-----FGRQIHGHIVKLGLESEVSVGTPLVDFYVKCS 261
Query: 360 -------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
E N V+W+++I+GY Q E+AL+ + ++R ++D T++ +F
Sbjct: 262 NLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQ 321
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
ACS L G HA +K+ + + ++++ MYSRCG ++ A F SI P+ A
Sbjct: 322 ACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVA 381
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
WTA++ GY++ G EA+ LF M + + PNA TF+ VL+AC +GLV EG + SM
Sbjct: 382 WTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMS 441
Query: 527 S-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
S YGV T++HY C+VD+ R+G L EA E I+ MP DA+ W LL CW + N+E+G
Sbjct: 442 SNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIG 501
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
E AA+ +F LD + + Y+++ N+YA GKW + ++RK + ++K+ CSWI + +
Sbjct: 502 ELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGK 561
Query: 646 VHAFSVEDRNNPNCNVIYATLEHL 669
VH F V D+++P IY+ LE L
Sbjct: 562 VHRFIVGDKHHPQTEEIYSKLEAL 585
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 208/472 (44%), Gaps = 69/472 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+M R +VSWNT++ Y++ FD+ + S M K N +T+ L
Sbjct: 59 GSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFL 118
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ L GKQIH ++SG V + + Y C +E A+ VF+++ E N +
Sbjct: 119 RSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAV 178
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ++VGY Q DA +F KM + V +
Sbjct: 179 AWTGIMVGYTQAERQMDALALFAKMVNEGVEL---------------------------- 210
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+EY F V++ACA L G+ +HG ++K G E + S+G L++FY C +
Sbjct: 211 -----DEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLES 265
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSISYNSMIKGYAV 327
A + ++ + P + ++LI G MG E+A E + R + NS +Y S+ + +
Sbjct: 266 ATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSA 325
Query: 328 YGQVDDSKRLFEKMPHRSIISL----NTMISVIPEMER--------------NPVTWNSM 369
+ + S+++ + MI++ R + V W ++
Sbjct: 326 LADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAI 385
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTP 428
I+GY +AL+L+ M+ + TF + ACS G + +G Q L +
Sbjct: 386 IAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLES------ 439
Query: 429 FESNVYVGTS------LVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG 473
SN V T+ +VD+YSR G + +A S+ SP+ +W L+ G
Sbjct: 440 MSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 197/440 (44%), Gaps = 56/440 (12%)
Query: 19 VSTNKAITECG-RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
S N AI+ + G L A +F++M + V+W ++ GY++ + ++L+L + M
Sbjct: 146 ASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVN 205
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V+L+E FS +L CA L L G+QIH ++K G E VG+ L+ FY C +E
Sbjct: 206 EGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLES 265
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A + F+ + E N++ WS ++ GY Q
Sbjct: 266 ATKAFEWISEPNDVSWSALITGYCQMGEF------------------------------- 294
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E+ALK F +R ++ N +T+ S+ +AC+ L F G H IK +
Sbjct: 295 -EEALKTFESLRTRSVDI-NSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGES 352
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----A 313
A+I Y C D A RV++ +++P A ++I G G +A +F R+ +
Sbjct: 353 AMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRP 412
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
N++++ +++ + G V + ++ E M S + T I ++ M+ Y
Sbjct: 413 NAVTFIAVLTACSHSGLVIEGRQYLESMS--SNYGVATTID----------HYDCMVDIY 460
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESN 432
+ ++AL+L +R + ++ L C +L+ G+L +L + P ++
Sbjct: 461 SRAGFLQEALEL---IRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTA 517
Query: 433 VYVGTSLVDMYSRCGSINDA 452
Y+ + ++Y+ G +A
Sbjct: 518 GYI--LMFNLYASFGKWKEA 535
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 286/538 (53%), Gaps = 27/538 (5%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
YV+C + A ++F MP ++VV W L++GY + E L LF+ M PNEY
Sbjct: 60 YVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLE-VLVLFKNMVSLQNACPNEY 118
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
F + + AC+ G EG HGLL K G + + AL+ Y C + A++V D +
Sbjct: 119 VFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTV 178
Query: 280 ENPCLN---ASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIK--------- 323
+N + NS++N L+ GR E+A + R+ + + ++Y ++
Sbjct: 179 PGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQ 238
Query: 324 -GYAVYGQVDDSKRLFEKMPHRSIIS--------LNTMISVIPEMERNPVTWNSMISGYV 374
G V+ ++ +F++ +I LN RN V W ++++ Y+
Sbjct: 239 LGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYL 298
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
QN E++L L+ M + TF+VL +AC+ + +L+ G LLHA + K F+++V
Sbjct: 299 QNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVI 358
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
V +L++MYS+ GSI+ + F+ + ++ W A++ GYSHHGLG +A+ +F+ M+ +
Sbjct: 359 VRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAE 418
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
PN TF+GVLSA GLV EG M+++ + P LEHYTC+V LL R+G L EA
Sbjct: 419 ECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEA 478
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
E F+K ++ D V W LL+AC N ++G R A+ + +D + Y +LSN+YA
Sbjct: 479 ENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKA 538
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
+W + IRK + +KK+PG SW+++ + +H F E N+P IY ++ L A
Sbjct: 539 RRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLA 596
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 203/487 (41%), Gaps = 95/487 (19%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFSTI 90
GQL ARNLFD MP+R VVSWN ++ GY E L L M N NE F+T
Sbjct: 64 GQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTA 123
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL---HE 147
LS C+ + +G Q H L+ K G C ++V S L+ Y+ C +E A +V D + H
Sbjct: 124 LSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHV 183
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
++ ++ +L V+ +A +V +M VD C W
Sbjct: 184 NDIFSYNSVLNALVESGRGEEAVEVLRRM------------------VDEC------VAW 219
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
+ T+ V+ CA++ G VH L++ G FDE +G LI+ Y C
Sbjct: 220 ---------DHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCG 270
Query: 268 AFDGAMRVYDRLEN--------------------------PCLNASNS---------LIN 292
A V+D L+N C++ + L+N
Sbjct: 271 EVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLN 330
Query: 293 GLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
+ + +L+ R+ + + I N++I Y+ G +D S +F M +R II
Sbjct: 331 ACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDII- 389
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
TWN+MI GY + L ++ALQ++ M TF + A
Sbjct: 390 ----------------TWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAY 433
Query: 409 SCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAA 466
S LG +++G HL++ E + T +V + SR G +++A+ + +V A
Sbjct: 434 SHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVA 493
Query: 467 WTALMNG 473
W L+N
Sbjct: 494 WRTLLNA 500
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 134/287 (46%), Gaps = 24/287 (8%)
Query: 295 ISMGRIEDAE-LIFNRLTEANSISY-NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
+ G+ A+ LI N+ + + IS+ NS++ Y GQ+ ++ LF+ MP
Sbjct: 28 LPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMP---------- 77
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACSCL 411
RN V+WN +++GY+ H + L L+ M L F+ ACS
Sbjct: 78 -------LRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHG 130
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA---AWT 468
G +++G H L K + YV ++LV MYSRC + A ++ +V ++
Sbjct: 131 GRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYN 190
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
+++N G G EAV + M+++ + + T+VGV+ C + + G+++ +
Sbjct: 191 SVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRG 250
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G++ + ++D+ G+ G + A + + VVW AL++A
Sbjct: 251 GLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQ-NRNVVVWTALMTA 296
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 33/209 (15%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G+++ ARN+FD + R VV W ++ Y + F+ESL+L + M R NE TF+
Sbjct: 267 GKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFA 326
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L+ CA + +L G +H V K G++ V + L+ Y+ I+ + VF ++
Sbjct: 327 VLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYR 386
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ M+ GY L A VF +D+V
Sbjct: 387 DIITWNAMICGYSHHGLGKQALQVF-----QDMV-------------------------- 415
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEG 237
S E PN TF V+ A + LG EG
Sbjct: 416 --SAEECPNYVTFIGVLSAYSHLGLVKEG 442
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
Query: 408 CSCLGSLQQGQLLHAHLV---KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
C+ + L G+ +HA + +T S++ SLV +Y +CG + A+ F ++ NV
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLE-QDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+W LM GY H G E ++LF+ M+ Q+ PN F LSAC G V EGM+
Sbjct: 82 VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
+ +G+V + +V + R H+ A + + +P E
Sbjct: 142 LLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGE 181
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++ N I ++G + ++ N+F M R +++WN M+CGYS ++L + M
Sbjct: 357 VIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVS 416
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDG 103
+ N TF +LS + L + +G
Sbjct: 417 AEECPNYVTFIGVLSAYSHLGLVKEG 442
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/516 (33%), Positives = 276/516 (53%), Gaps = 79/516 (15%)
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
EA+++FD++ E N + W+ ++ GYVQ ++S+A VF KMP+++VV WT +I GY + +
Sbjct: 12 EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQ--E 69
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE-GKVVHGLLIKCGFEFDESI 255
G + +L W MP +V+ LG E G+V
Sbjct: 70 GLIEEAELLFW------RMPER----NVVSWTVMLGGLIEDGRV---------------- 103
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
D A +++D + + AS ++I+GL S GR+ +A IF+ + + N
Sbjct: 104 --------------DEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNV 149
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
+++ SMI G E++ TW++MI Y +
Sbjct: 150 VAWTSMISG-----------------------------------EKDDGTWSTMIKIYER 174
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
+AL L+ M++ + + + + C L SL G+ +H+ LV++ F+ ++YV
Sbjct: 175 KGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYV 234
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
+ L+ MY +CG + A+ F SS ++ W +++ GY+ HG G +A+ +F M I
Sbjct: 235 SSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSI 294
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAE 554
P+ TF+GVLSAC G V EG++IF SMKS Y V P EHY C+VDLLGR+G L+EA
Sbjct: 295 APDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAM 354
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
I++MP+E DA+VWGALL AC N+++ E AA+K+ L+ Y++LSN+Y+
Sbjct: 355 NLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQS 414
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
+W +++RK + ++K PGCSWIE++ +VH FS
Sbjct: 415 RWKDVVELRKTMRAKNLRKSPGCSWIEVDKKVHIFS 450
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 153/354 (43%), Gaps = 58/354 (16%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
ET +S N ++ +NG + AR +FD+MP R VVSW M+ GY + +E+ L
Sbjct: 22 ETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWR 81
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLI-DGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M NV +S L LI DG+
Sbjct: 82 MPERNV----------VSWTVMLGGLIEDGR----------------------------- 102
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++EA+++FD + + + + M+ G + +A ++F +MP+++VV WT +ISG
Sbjct: 103 -VDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKD 161
Query: 194 S-----------VDGCE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
G E +AL LF M+ G P+ + SV+ C L + G+ VH
Sbjct: 162 DGTWSTMIKIYERKGFELEALALFSLMQREGVR-PSFPSVISVLSVCGSLASLDHGRQVH 220
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
L++ F+ D + LI Y C A RV+DR + + NS+I G G E
Sbjct: 221 SQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGE 280
Query: 302 DAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
A +F+ + + + I++ ++ + G+V + +FE M + + T
Sbjct: 281 KALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKT 334
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 113/246 (45%), Gaps = 47/246 (19%)
Query: 5 ATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCG------ 58
A Q +M + ++ STN C G+L+ AR +FD+MP R VV+W +M+ G
Sbjct: 106 ARQLFDMMPVKDVVASTNMIDGLCS-EGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGT 164
Query: 59 -------YSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL 111
Y + E+L+L S M R V+ + + ++LSVC L SL G+Q+H ++
Sbjct: 165 WSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLV 224
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
+S ++ +V S L+ Y C ++ AKRVFD + ++W+ ++ GY Q A +
Sbjct: 225 RSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALE 284
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
VF M ++ S+ P+E TF V+ AC+
Sbjct: 285 VFHDM--------------FSSSI-------------------APDEITFIGVLSACSYT 311
Query: 232 GAFCEG 237
G EG
Sbjct: 312 GKVKEG 317
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 40/243 (16%)
Query: 293 GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
G R +A +F+++ E N+IS+N ++ GY G + +++++F+KMP R+++S
Sbjct: 3 GYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVS---- 58
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
W +MI GYVQ L E+A L+ M +R +++V+ G
Sbjct: 59 -------------WTAMIRGYVQEGLIEEAELLFWRMP----ERNVVSWTVMLGGLIEDG 101
Query: 413 SLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
+ + QL VK +V T+++D G + +A+ F + NV AWT+++
Sbjct: 102 RVDEARQLFDMMPVK-----DVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMI 156
Query: 472 NG-------------YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+G Y G EA+ LF +M + + P+ + + VLS C ++ G
Sbjct: 157 SGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHG 216
Query: 519 MKI 521
++
Sbjct: 217 RQV 219
>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
Length = 557
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/510 (33%), Positives = 275/510 (53%), Gaps = 22/510 (4%)
Query: 170 FDVFIKMPKKDVVVWTKLISGYAK----SVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
FD + ++V +WT I+ YA+ S+ E AL LFR M G PN +T SV+
Sbjct: 65 FDSAVPAASENVYLWTATIAAYARHASSSLSAAEGALALFRLMLRRGVPRPNAFTASSVV 124
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
R C+ L A EG VHG L G +G AL++ Y A RV+D + + +
Sbjct: 125 RCCSALRAVREGIQVHGFLFSAGLGRASHVGAALVDMYGSLGRVADARRVFDEMPSTNVV 184
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
N+++ + G +E +F+R+ E + IS+N+++ GY G+ ++ LFE+MP
Sbjct: 185 LGNTMVACYVRAGDVEAGRDVFDRMAERDPISWNTLMMGYLRQGEAGVARDLFEEMP--- 241
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
+RN +WN +I+ Q L A++++ MR +T +VL
Sbjct: 242 --------------DRNVNSWNMVIAACSQEGLWADAVEVFNRMRLARFQPDPATMAVLM 287
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
AC+ LGSL +H L K E N +V SL+DMY++CGS++ A F +
Sbjct: 288 SACAQLGSLSIASQVHGILRKGCVEMNFHVLNSLIDMYAKCGSVSQAHLLFVETRLKDTV 347
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
++ ++ + HG G +A+ +F+ M E+ + P+A TF+GVLSAC AGLV++G F SM
Sbjct: 348 SYNVMICALAQHGHGRDALQIFDEMSEEGLQPDAVTFLGVLSACAHAGLVHDGKFYFESM 407
Query: 526 KS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
++ Y + + +HY C+VDL GR+G + EA + + MP++ A VWGAL++AC N+EV
Sbjct: 408 RTNYAIEQSPDHYACMVDLYGRAGLIEEAYQLARAMPVKPHAGVWGALINACRKHCNVEV 467
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
G+ AA+++ ++ YV+L+N A +W + + + ++K GCSW+E++
Sbjct: 468 GKVAARELIAIEPGNPGTYVLLANTLARGQQWDFVETVWQSMRGKGIEKTAGCSWLEVDR 527
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
VH F + + ++PN + IY LEHL L
Sbjct: 528 VVHEFLMGESSHPNSDEIYCILEHLYLQLT 557
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 204/477 (42%), Gaps = 64/477 (13%)
Query: 5 ATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQ-MPIRT--VVSWNTMLCGYSK 61
A Q Q + L + A+ + AR +FD +P + V W + Y++
Sbjct: 29 ARQLQAQLLVRGLPLPARAAVALIASSHSPRHARAVFDSAVPAASENVYLWTATIAAYAR 88
Query: 62 WAK-----FDESLSLVSTMHRSNV-KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY 115
A + +L+L M R V + N T S+++ C+ L ++ +G Q+H + +G
Sbjct: 89 HASSSLSAAEGALALFRLMLRRGVPRPNAFTASSVVRCCSALRAVREGIQVHGFLFSAGL 148
Query: 116 ECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIK 175
VG+ L+ Y + + +A+RVFDE+ N +L + M+ YV+ + DVF +
Sbjct: 149 GRASHVGAALVDMYGSLGRVADARRVFDEMPSTNVVLGNTMVACYVRAGDVEAGRDVFDR 208
Query: 176 MPKKDVVVWTKLISGYAKS------------------------VDGCEK------ALKLF 205
M ++D + W L+ GY + + C + A+++F
Sbjct: 209 MAERDPISWNTLMMGYLRQGEAGVARDLFEEMPDRNVNSWNMVIAACSQEGLWADAVEVF 268
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
MR + P+ T ++ ACA+LG+ VHG+L K E + + +LI+ Y
Sbjct: 269 NRMRLA-RFQPDPATMAVLMSACAQLGSLSIASQVHGILRKGCVEMNFHVLNSLIDMYAK 327
Query: 266 CEAFDGA--MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYN 319
C + A + V RL++ + N +I L G DA IF+ ++E +++++
Sbjct: 328 CGSVSQAHLLFVETRLKDTV--SYNVMICALAQHGHGRDALQIFDEMSEEGLQPDAVTFL 385
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
++ A G V D K FE M I E++P + M+ Y + L
Sbjct: 386 GVLSACAHAGLVHDGKFYFESMRTNYAI------------EQSPDHYACMVDLYGRAGLI 433
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYV 435
E+A QL R + + + L +AC +++ G++ L+ P YV
Sbjct: 434 EEAYQL---ARAMPVKPHAGVWGALINACRKHCNVEVGKVAARELIAIEPGNPGTYV 487
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 290/576 (50%), Gaps = 74/576 (12%)
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYAN--CFEIEEAKRVFDELHEDNELLWSLMLVGYV 161
+Q+H LK+ FV S LL Y++ ++ A+ +FD + + + W+ ++ YV
Sbjct: 33 EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 92
Query: 162 QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTF 221
+ D +V++ +L+ Y +P+ +T
Sbjct: 93 ENQFSHDG-----------IVLFHELVHEY-----------------------LPDNFTL 118
Query: 222 DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
VI+ CARLG EGK +HGL +K GF D + G+L+ Y C D A +V+D
Sbjct: 119 PCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFD---- 174
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
G I+ +++N L + N +S+N+MI GY G D + LF +M
Sbjct: 175 ----------------GMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQM 218
Query: 342 PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
P + VTWN MI+GY N A++++ M KL + +T
Sbjct: 219 PIWDL-----------------VTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATL 261
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
+ A S L L +G+ +H+++ K FE + +GTSL++MY++CG I A F +I
Sbjct: 262 VSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQK 321
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
V WTA++ G HG+ + A+ LF M + + PNA F+GVL+AC AGLV++G +
Sbjct: 322 KKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQY 381
Query: 522 FRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWM 580
F M Y + PTLEHY C+VD+L R+GHL EA+ I++MPI + V+W +LL
Sbjct: 382 FDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHG 441
Query: 581 NMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWI 640
+++GE AAQ++ + + I Y++LSN+YA G W K +R+ + +KDPGCS +
Sbjct: 442 KIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSV 501
Query: 641 ELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
E +H F V D ++P IYA + + L V
Sbjct: 502 EHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCV 537
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 173/355 (48%), Gaps = 18/355 (5%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+L+A +T + + S A+ + L AR++FD++ R+++ WNT++ Y +
Sbjct: 34 QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 93
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
+ + L + + N T ++ CA+L + +GKQIH L LK G+ FV
Sbjct: 94 NQFSHDGIVLFHELVHEYLPDN-FTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFV 152
Query: 122 GSGLLFFYANCFEIEEAKRVFD-----------ELHEDNELLWSLMLVGYVQCNLMSDAF 170
L+ Y+ C EI+ A++VFD L + N + W+ M+ GY++ A
Sbjct: 153 QGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSAL 212
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACAR 230
++F +MP D+V W +I+GY + + A+K+F M + G P+ T SV+ A +
Sbjct: 213 ELFYQMPIWDLVTWNLMIAGYELNGQFMD-AVKMFFMMLKLGSR-PSHATLVSVLSAVSG 270
Query: 231 LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSL 290
L +G+ +H + K GFE D +G +LIE Y C + A+ V+ ++ + ++
Sbjct: 271 LAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAI 330
Query: 291 INGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKM 341
I GL G A +F + + N+I + ++ G VDD ++ F+ M
Sbjct: 331 IVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMM 385
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 9/175 (5%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND---AQASFSSIS 460
LF CS ++Q LHA +KT ++ +V + L+ +YS IND A++ F I
Sbjct: 22 LFQTCSAPQEVEQ---LHAFSLKTAIFNHPFVSSRLLALYSD-PKINDLGYARSIFDRIQ 77
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
++ W ++ Y + + ++LF ++ + +P+ T V+ C R G+V EG +
Sbjct: 78 RRSLIHWNTIIKCYVENQFSHDGIVLFHELV-HEYLPDNFTLPCVIKGCARLGVVQEGKQ 136
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
I G + +V++ + G + A + M I+ D V+W +L+
Sbjct: 137 IHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDG 190
>gi|115474659|ref|NP_001060926.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|42408463|dbj|BAD09644.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50725835|dbj|BAD33365.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113622895|dbj|BAF22840.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|215704880|dbj|BAG94908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712334|dbj|BAG94461.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 674
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 207/645 (32%), Positives = 317/645 (49%), Gaps = 46/645 (7%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T GR G+L A+ LFDQMP R V+SW +L Y+ + + M R N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 82 LNETTFSTIL---------------------SVCAQLNSLIDGKQIHCLVL---KSGYEC 117
S L S A ++ L + +H L + ++
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVYEEMPWQW 161
Query: 118 FEFVGS-GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM 176
+ VGS L+ Y E+ A RVF+ + + + WS M+ G + +S+A VF M
Sbjct: 162 RDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAM 221
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
P+++VV WT +I GY K C L LF MR G + N T + ACA E
Sbjct: 222 PERNVVSWTSMIRGYVKR-GMCRDGLLLFLNMRREGVQV-NTTTLSVALDACAAASLARE 279
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
G +H L+I GFE D +G ++I Y A R +D ++ + + NSLI G +
Sbjct: 280 GIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQ 339
Query: 297 MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+E+A ++F + + +++S+ SM+ G+A G + +S LFE+MP
Sbjct: 340 HDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMP-------------- 385
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
++ V W ++IS ++ N + A++ + M + FS L A + L L Q
Sbjct: 386 ---VKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQ 442
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ HA+ + + + V TSLV MY++CG + +A FSSIS+P++ A +++ +
Sbjct: 443 GRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQ 502
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLE 535
HG +A+ LF M PN TF+G+L+ C RAG V +G F SM+ YGV P E
Sbjct: 503 HGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPE 562
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
HYTC+VDLLGR+G L EA E I MP + W ALLSA N+ + AAQK+
Sbjct: 563 HYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEK 622
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWI 640
D +AY +LS +++ G ++M +L++L K+ PG S I
Sbjct: 623 DPYDATAYTVLSRMFSSAGMEDEEMLKVVQLSNLASKR-PGYSLI 666
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 214/464 (46%), Gaps = 51/464 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S + + ++G + AR +FD MP R VVSW +M+ GY K + L L M R
Sbjct: 195 VISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRR 254
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V++N TT S L CA + +G QIH L++ G+E F+G ++ Y+ + +
Sbjct: 255 EGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVD 314
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA----- 192
AKR FD + + + + W+ ++ GYVQ +++ +A +F M +KD V WT ++ G+A
Sbjct: 315 AKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWM 374
Query: 193 -KSVDGCEKA---------------------LKLFRWM-RESGEN-MPNEYTFDSVIRAC 228
+SV+ E+ L RW R S E PN F ++ A
Sbjct: 375 RESVELFEQMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSAL 434
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A L +G+ H I G+ FD ++ +L+ Y C A V+ + NP L A N
Sbjct: 435 ASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAIN 494
Query: 289 SLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
S+I + G +EDA +F ++ A N +++ ++ G A G V FE M R
Sbjct: 495 SMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESM--R 552
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+ + E NP + M+ + L +AL++ +M + + ++ L
Sbjct: 553 PVYGV----------EPNPEHYTCMVDLLGRAGLLAEALEMINSMPQ---NDHSDAWAAL 599
Query: 405 FHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRCG 447
A S +L ++ L+ K P+++ Y T L M+S G
Sbjct: 600 LSASSLHSNLAFAKIAAQKLLEKDPYDATAY--TVLSRMFSSAG 641
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 100/259 (38%), Gaps = 36/259 (13%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
Q+ IVS N IT ++ + A LF M + VSW +M+ G++ ES+ L
Sbjct: 323 QQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFE 382
Query: 74 T-------------------------------MHRSNVKLNETTFSTILSVCAQLNSLID 102
M + K N FS +LS A L L
Sbjct: 383 QMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQ 442
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
G+Q H + G+ V + L+ YA C + EA VF + + + + M+ +VQ
Sbjct: 443 GRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQ 502
Query: 163 CNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
+ DA +F KM K + V + +++G A++ ++ F MR PN
Sbjct: 503 HGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARA-GFVQQGYNYFESMRPVYGVEPNP 561
Query: 219 YTFDSVIRACARLGAFCEG 237
+ ++ R G E
Sbjct: 562 EHYTCMVDLLGRAGLLAEA 580
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/507 (33%), Positives = 277/507 (54%), Gaps = 26/507 (5%)
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCE---KALKLFRWMRESGENMPNEYTFDSVIRACA 229
F +M +V V+ +I G+ C +AL+ + M E +P YTF S+++AC
Sbjct: 191 FTQMENPNVFVYNAMIKGFVY----CGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACT 246
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
+ A G++VH + K GFE + AL++FY E A +V+D + A +
Sbjct: 247 FMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTA 306
Query: 290 LINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
+++ L +G ++ A +F + E N+ ++N+MI GYA G V+ ++ LF +MP + IIS
Sbjct: 307 MVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIIS- 365
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
W +MI+ Y QN ++ AL +Y MR I T S + AC+
Sbjct: 366 ----------------WTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACA 409
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+G+L+ G+ +H +++ +VY+G++LVDMY++CGS++ + F ++ N+ W A
Sbjct: 410 HIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNA 469
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSY 528
++ G + HG +A+ +F IM + I+PN TF+ +LSAC AGLV+EG F SM + Y
Sbjct: 470 VIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDY 529
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
+ P + HY C+VD+L +SG+L+EA E IK M E ++++WGALL+ C N E+ E A
Sbjct: 530 DIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDA 589
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV-KKDPGCSWIELNSRVH 647
+++ L+ Y +L ++YA W + IR + V KK PG SWIEL +H
Sbjct: 590 VEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIH 649
Query: 648 AFSVEDRNNPNCNVIYATLEHLTANLN 674
FS ++P+ + IY L L L
Sbjct: 650 QFSASADSHPDSDKIYFVLTELDGQLK 676
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 172/391 (43%), Gaps = 64/391 (16%)
Query: 41 FDQMPIRTVVSWNTML-----CGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
F QM V +N M+ CGY F V + SNV TFS+++ C
Sbjct: 191 FTQMENPNVFVYNAMIKGFVYCGY----PFRALQCYVHMLEESNVLPTSYTFSSLVKACT 246
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+ ++ G+ +HC + K G+E FV + L+ FY+ + EA++VFDE+ E + W+
Sbjct: 247 FMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTA 306
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK--SVDGCE-------------- 199
M+ + M A +F +MP+++ W +I GYA+ +V+ E
Sbjct: 307 MVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISW 366
Query: 200 --------------KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
AL ++ MR +G +P+E T +V ACA +GA GK +H ++
Sbjct: 367 TTMITCYSQNKQYQDALAIYSEMRLNG-IIPDEVTMSTVASACAHIGALELGKEIHHYVM 425
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
G D IG AL++ Y C + D ++ ++ +L + L N++I GL G E A
Sbjct: 426 SQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALR 485
Query: 306 IFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS------------- 348
+F + N +++ S++ G VD+ + F M I
Sbjct: 486 MFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDML 545
Query: 349 -----LNTMISVIPEMERNP--VTWNSMISG 372
LN + +I ME P + W ++++G
Sbjct: 546 SKSGYLNEALELIKSMEFEPNSIIWGALLNG 576
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 143/322 (44%), Gaps = 66/322 (20%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I R G + +A LF+QMP + ++SW TM+ YS+ ++ ++L++ S M + +
Sbjct: 336 NTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGII 395
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+E T ST+ S CA + +L GK+IH V+ G ++GS L+ YA C
Sbjct: 396 PDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKC--------- 446
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEK 200
G + +L+ +F K+ K++ W +I G A V G EK
Sbjct: 447 -----------------GSLDLSLL-----IFFKLTDKNLYCWNAVIEGLA--VHGYAEK 482
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL++F M E + MPN TF S++ AC G EG+
Sbjct: 483 ALRMFAIM-EREKIMPNGVTFISILSACTHAGLVDEGR---------------------- 519
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEANSISYN 319
F R YD P + +++ L G + +A ELI + E NSI +
Sbjct: 520 ------SRFLSMTRDYDI--RPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWG 571
Query: 320 SMIKGYAVYGQVDDSKRLFEKM 341
+++ G ++G + ++ E++
Sbjct: 572 ALLNGCKLHGNCEIAEDAVEQL 593
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 126/304 (41%), Gaps = 60/304 (19%)
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
+ I+ ++ + F ++ N YN+MIKG+ G P R
Sbjct: 172 HQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYCG-----------YPFR--- 217
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFH 406
ALQ Y+ M + + + T TFS L
Sbjct: 218 ----------------------------------ALQCYVHMLEESNVLPTSYTFSSLVK 243
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
AC+ + +++ GQ++H H+ K FES+++V T+LVD YS+ +++A+ F + + A
Sbjct: 244 ACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFA 303
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
WTA+++ + G A LFE M E+ N AT+ ++ R G V +F M
Sbjct: 304 WTAMVSALARVGDMDSARKLFEEMPER----NTATWNTMIDGYARLGNVESAELLFNQMP 359
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE---LDAVVWGALLSACWFWMNME 583
+ ++ +T ++ ++ +A +M + D V + SAC +E
Sbjct: 360 TKDII----SWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALE 415
Query: 584 VGER 587
+G+
Sbjct: 416 LGKE 419
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 10/209 (4%)
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CS + L L A ++KT + ++ + S++ +F+ + +PNV +
Sbjct: 146 CSTINELHG---LCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVY 202
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
A++ G+ + G A+ + MLE+ +++P + TF ++ AC V G + +
Sbjct: 203 NAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIW 262
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
G L T +VD + L EA + +M E DA W A++SA +M+
Sbjct: 263 KKGFESHLFVQTALVDFYSKLEILSEARKVFDEM-CERDAFAWTAMVSALARVGDMD--- 318
Query: 587 RAAQKMF-GLDKKPISAYVILSNIYAVLG 614
+A+K+F + ++ + + + + YA LG
Sbjct: 319 -SARKLFEEMPERNTATWNTMIDGYARLG 346
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 80/190 (42%), Gaps = 8/190 (4%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
+ G L + +F ++ + + WN ++ G + +++L + + M R + N TF
Sbjct: 444 AKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFI 503
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYEC---FEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+ILS C L+D + L + Y+ G + + + E + +
Sbjct: 504 SILSACTH-AGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSME 562
Query: 146 HEDNELLWSLMLVG---YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
E N ++W +L G + C + DA + + + + + L+S YA+ D E A
Sbjct: 563 FEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVA- 621
Query: 203 KLFRWMRESG 212
+ M+E G
Sbjct: 622 HIRSMMKEKG 631
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 206/700 (29%), Positives = 349/700 (49%), Gaps = 102/700 (14%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
++ ++G L AR +F+QM R V+ N ++ G + +E+ L M+ S + ++
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSP 308
Query: 85 TTFSTILSV-----CAQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEA 138
++ +LS A+ L G+++H V+ +G F +G+GL+ YA C I
Sbjct: 309 ESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSI--- 365
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+DA VF M KD V W +I+G + +GC
Sbjct: 366 ----------------------------ADARRVFYFMTDKDSVSWNSMITGLDQ--NGC 395
Query: 199 E-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+A++ ++ MR + +P +T S + +CA L G+ +HG +K G + + S+
Sbjct: 396 FIEAVERYKSMRRH-DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSN 454
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR-IEDAELIF--------- 307
AL+ Y + +++ + + NS+I L R + +A + F
Sbjct: 455 ALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQK 514
Query: 308 -NRLT-----------------------------EANSISYNSMIKGYAVYGQVDDSKRL 337
NR+T + + N++I Y G++D +++
Sbjct: 515 LNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKI 574
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
F +M R R+ VTWNSMISGY+ N L KAL L M +
Sbjct: 575 FSRMAER----------------RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLD 618
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
++ + A + + +L++G +HA V+ ES+V VG++LVDMYS+CG ++ A F+
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM-LEQDIVPNAATFVGVLSACVRAGLVN 516
++ N +W ++++GY+ HG G EA+ LFE M L+ P+ TFVGVLSAC AGL+
Sbjct: 679 TMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLE 738
Query: 517 EGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
EG K F SM SYG+ P +EH++C+ D+LGR+G L + E+FI+ MP++ + ++W +L A
Sbjct: 739 EGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
Query: 576 CWF--WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
C E+G++AA+ +F L+ + YV+L N+YA G+W + RK++ +VKK
Sbjct: 799 CCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKK 858
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ G SW+ + VH F D+++P+ +VIY L+ L +
Sbjct: 859 EAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM 898
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 224/490 (45%), Gaps = 46/490 (9%)
Query: 126 LFFYANCFEIEEAKRVFDELHEDNEL-----LWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
L F +C A R F N L L + ++ Y++ A VF +MP ++
Sbjct: 7 LSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN 66
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA--FCEGK 238
V W ++SGY+++ + E AL R M + G N+Y F SV+RAC +G+ G+
Sbjct: 67 CVSWACIVSGYSRNGEHKE-ALVFLRDMVKEG-IFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG-AMRVYDRLENPCLNASNSLINGLISM 297
+HGL+ K + D + LI Y C G A+ + +E + NS+I+
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 298 GRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMP---HRSII--- 347
G A IF+ + + ++ S++ + D RL E++ +S +
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPD--VRLLEQIMCTIQKSGLLTD 242
Query: 348 ---------------SLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
SL+ V +ME RN VT N ++ G V+ E+A +L+M M
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 392 LAIDRTRSTFSVLF-----HACSCLGSLQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSR 445
+ ID + ++ +L ++ + L++G+ +H H++ T + V +G LV+MY++
Sbjct: 303 M-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CGSI DA+ F ++ + +W +++ G +G EAV ++ M DI+P + T +
Sbjct: 362 CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
LS+C G +I G+ + ++ L +G+L+E + MP E D
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHD 480
Query: 566 AVVWGALLSA 575
V W +++ A
Sbjct: 481 QVSWNSIIGA 490
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 138/609 (22%), Positives = 249/609 (40%), Gaps = 81/609 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G V+AR +FD+MP+R VSW ++ GYS+ + E+L + M + + N+ F ++L
Sbjct: 50 GDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVL 109
Query: 92 SVCAQLNS--LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
C ++ S ++ G+QIH L+ K Y V + L+ Y C
Sbjct: 110 RACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC----------------- 152
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ VGY C F + K+ V W +IS Y+++ D A ++F M+
Sbjct: 153 -----IGSVGYALC--------AFGDIEVKNSVSWNSIISVYSQAGDQ-RSAFRIFSSMQ 198
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKV-----VHGLLIKCGFEFDESIGGALIEFYC 264
G P EYTF S++ L E V + + K G D +G L+ +
Sbjct: 199 YDGSR-PTEYTFGSLVTTACSL---TEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFA 254
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF---NRLTEANSISYNSM 321
+ A +V++++E N L+ GL+ E+A +F N + + + SY +
Sbjct: 255 KSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL 314
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISL----------NTMISVIPE------------- 358
+ + Y ++ + H +I+ N ++++ +
Sbjct: 315 LSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYF 374
Query: 359 -MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
+++ V+WNSMI+G QN +A++ Y +MR+ I T +C+ L + G
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG 434
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
Q +H +K + NV V +L+ +Y+ G +N+ + FSS+ + +W +++ +
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARS 494
Query: 478 GLG-SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
EAV+ F N TF VLSA G +I +
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT 554
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC-----------WFWMNMEVG 585
++ G+ G + E+ M D V W +++S W ++ G
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTG 614
Query: 586 ERAAQKMFG 594
+R M+
Sbjct: 615 QRLDSFMYA 623
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 124/587 (21%), Positives = 240/587 (40%), Gaps = 107/587 (18%)
Query: 41 FDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS- 99
F + ++ VSWN+++ YS+ + + S+M + E TF ++++ L
Sbjct: 163 FGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEP 222
Query: 100 ---LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L++ QI C + KSG FVGSGL+ +A + A++VF+++ N + + +
Sbjct: 223 DVRLLE--QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGL 280
Query: 157 LVGYVQCNLMSDAFDVFIKM-------PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+VG V+ +A +F+ M P+ V+ L+S + + E LK
Sbjct: 281 MVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI----LLSSFPEYSLAEEVGLK------ 330
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF-EFDESIGGALIEFYCGCEA 268
+G+ VHG +I G +F IG L+ Y C +
Sbjct: 331 --------------------------KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMG-RIEDAE---------------LIFNRLTE 312
A RV+ + + + NS+I GL G IE E + + L+
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 313 ANSISY-----------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
S+ + N+++ YA G +++ +++F MP +S
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 484
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
N++I + ER+ +A+ ++ ++ R TFS + A S
Sbjct: 485 NSIIGALARSERSL----------------PEAVVCFLNAQRAGQKLNRITFSSVLSAVS 528
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS-PNVAAWT 468
L + G+ +H +K +L+ Y +CG ++ + FS ++ + W
Sbjct: 529 SLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWN 588
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
++++GY H+ L ++A+ L ML+ ++ + VLSA + GM++
Sbjct: 589 SMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRA 648
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + + +VD+ + G L A F MP+ ++ W +++S
Sbjct: 649 CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISG 694
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 139/323 (43%), Gaps = 66/323 (20%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK-FDESLSLVSTMHRSN 79
+N +T G L R +F MP VSWN+++ ++ + E++ R+
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG 512
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
KLN TFS++LS + L+ GKQIH L LK+ + L+ Y C E++ +
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCE 572
Query: 140 RVFDELHEDNE-LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
++F + E + + W+ M+ GY+ L++ A D +VW
Sbjct: 573 KIFSRMAERRDNVTWNSMISGYIHNELLAKALD----------LVW-------------- 608
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+M ++G+ + + + + +V+ A A + G VH ++ E D +G A
Sbjct: 609 --------FMLQTGQRL-DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
L++ Y C D A+R FN + NS S+
Sbjct: 660 LVDMYSKCGRLDYALR-------------------------------FFNTMPVRNSYSW 688
Query: 319 NSMIKGYAVYGQVDDSKRLFEKM 341
NSMI GYA +GQ +++ +LFE M
Sbjct: 689 NSMISGYARHGQGEEALKLFETM 711
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 19 VSTNKAITEC-GRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
+T A+ C G+ G++ +F +M R V+WN+M+ GY ++L LV M
Sbjct: 552 ATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFML 611
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
++ +L+ ++T+LS A + +L G ++H +++ E VGS L+ Y+ C ++
Sbjct: 612 QTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLD 671
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A R F+ + N W+ M ISGYA+
Sbjct: 672 YALRFFNTMPVRNSYSWNSM-------------------------------ISGYARHGQ 700
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
G E+ALKLF M+ G+ P+ TF V+ AC+ G EG
Sbjct: 701 G-EEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 740
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 36/303 (11%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N++I Y G ++++F++MP R N V+W ++SGY +N
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLR-----------------NCVSWACIVSGYSRNGE 82
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ--GQLLHAHLVKTPFESNVYVG 436
H++AL M K I + F + AC +GS+ G+ +H + K + + V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 437 TSLVDMYSRC-GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
L+ MY +C GS+ A +F I N +W ++++ YS G A +F M
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 496 VPNAATFVG-VLSACVRAGLVNEGMKIFR----SMKSYGVVPTLEHYTCVVDLLGRSGHL 550
P TF V +AC L +++ +++ G++ L + +V +SG L
Sbjct: 203 RPTEYTFGSLVTTAC---SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL----DKKPISAYVIL 606
A + M +AV L+ + + GE A + + D P S ++L
Sbjct: 260 SYARKVFNQMETR-NAVTLNGLMVGL---VRQKWGEEATKLFMDMNSMIDVSPESYVILL 315
Query: 607 SNI 609
S+
Sbjct: 316 SSF 318
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 286/544 (52%), Gaps = 32/544 (5%)
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
+AN + A+ FD E + + W+ ML YV+ + +A +F + DV+ W L+
Sbjct: 16 HANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALM 75
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNE--YTFDSVIRACARLGAFCEGKVVHGLLIK 246
SGY + E RE + MP +++ ++ AR G E + L
Sbjct: 76 SGYVQWGKMSEA--------RELFDRMPGRDVVSWNIMVSGYARRGDMVEAR----RLFD 123
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
D A++ Y + A RV+D + + N+++ I +++A+ +
Sbjct: 124 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 183
Query: 307 FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
FN + N S+N+M+ GYA G ++++K +F+ MP +++ V+W
Sbjct: 184 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-----------------QKDAVSW 226
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+M++ Y Q E+ LQL++ M + RS F+ + C+ + +L+ G LH L++
Sbjct: 227 AAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIR 286
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ +VG +L+ MY +CG++ DA+ +F + +V +W ++ GY+ HG G EA+ +
Sbjct: 287 AGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEI 346
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLG 545
F++M P+ T VGVL+AC +GLV +G+ F SM +GV EHYTC++DLLG
Sbjct: 347 FDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLG 406
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G L EA + +KDMP E D+ +WGALL A N E+G AA+K+F L+ + YV+
Sbjct: 407 RAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVL 466
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
LSNIYA GKW +R + VKK PG SWIE+ ++VH FS D +P IYA
Sbjct: 467 LSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAF 526
Query: 666 LEHL 669
LE L
Sbjct: 527 LEDL 530
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 126/529 (23%), Positives = 215/529 (40%), Gaps = 99/529 (18%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
+ E VS N + RNG++ AR LF+ V+SWN ++ GY +W K E+ L
Sbjct: 31 LAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEAREL 90
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M +V +++ ++S A+ +++ +++ + V SG YA
Sbjct: 91 FDRMPGRDV----VSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSG----YAQ 142
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+EEA+RVFD + E N + W+ M+ Y+Q +M +A ++F MP ++V W +++GY
Sbjct: 143 NGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGY 202
Query: 192 AK-----------------------------SVDGC-EKALKLFRWMRESGENMPNEYTF 221
A+ S GC E+ L+LF M GE + N F
Sbjct: 203 AQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWV-NRSAF 261
Query: 222 DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
V+ CA + A G +HG LI+ G+ +G AL+ Y C
Sbjct: 262 ACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKC--------------- 306
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
G +EDA F + E + +S+N+MI GYA +G ++ +F+ M
Sbjct: 307 ----------------GNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMM 350
Query: 342 PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRST 400
S P + +T +++ + L EK + + +M +
Sbjct: 351 ---------RTTSTKP----DDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEH 397
Query: 401 FSVLFHACSCLGSLQQGQLLHAH--LVKTPFESN-----VYVGTSLVDMYSRCGSINDAQ 453
++ + LG + G+L AH + PFE + +G S + G A
Sbjct: 398 YTCMI---DLLG--RAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELG--RSAA 450
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
+ N + L N Y+ G +A + +M+E+ V F
Sbjct: 451 EKIFELEPENAGMYVLLSNIYASSGKWRDARKM-RVMMEERGVKKVPGF 498
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 198/657 (30%), Positives = 334/657 (50%), Gaps = 61/657 (9%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
++ A+ +F+ + R +V WN ML G+++ E + S M R + +E TF++I S
Sbjct: 359 KMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFS 418
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
CA L+ L G Q+H +++K+ + FV + L+ YA ++EA++ F+
Sbjct: 419 ACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFE--------- 469
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
F+K+ D V W +I GY + + ++A +FR M +G
Sbjct: 470 --------------------FMKI--HDNVSWNAIIVGYVQE-EYNDEAFFMFRRMVSNG 506
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+P+E + S++ ACA + F +G+ H LL+K G + G +LI+ Y C A
Sbjct: 507 V-LPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAA 565
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVY 328
V+ + + + N+LI G +M +E+A +F + + +++ ++ G
Sbjct: 566 RDVFYSMPYRNVVSINALIAGY-TMSHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGA 624
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISV------------------IPEME--RNPVTWNS 368
++ +++ ++ +S + M+ V E++ + V W +
Sbjct: 625 FMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTA 684
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
+ISGY Q N HEKALQ Y MR I ++TF+ + AC+ + SLQ GQ +H+ + T
Sbjct: 685 LISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTG 744
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN-VAAWTALMNGYSHHGLGSEAVLLF 487
F + +SL+DMY++CG + + F + N V +W +++ G + +G EA+ +F
Sbjct: 745 FNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIF 804
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
+ M +Q I+P+ TF+GVLSAC AG V+EG K+F M +Y + P ++H C+VD+LGR
Sbjct: 805 KQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGR 864
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
G L+EAEEFI + + D ++W LL AC + G+RAA K+ L + S+YV+L
Sbjct: 865 WGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLMELKPQSSSSYVLL 924
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF-SVEDRNNPNCNVI 662
S +YA W +R+ + VKK PG SWIE V +V P C+ I
Sbjct: 925 SGLYAESENWSGADSLRREMKLKGVKKLPGYSWIEPGRDVQGRGAVRSTAGPGCSSI 981
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 152/603 (25%), Positives = 269/603 (44%), Gaps = 63/603 (10%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A+ F ++ + V +WN++L Y F + M V+ NE TF+ +L
Sbjct: 90 GNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVL 149
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S C+ L + GKQ+HC V K G+ F GL+ YA C + +A+ VFD + +
Sbjct: 150 SACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTV 209
Query: 152 LWSLMLVGYVQCNL-----------------------------------MSDAFDVFIKM 176
W+ ++ GYV+ ++DA +F ++
Sbjct: 210 SWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQI 269
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
P +VV W +ISG+AK E+A+ F ++++G + SV+ A A L
Sbjct: 270 PNPNVVAWNVMISGHAKR-GFAEEAISFFLELKKTGLK-ATRSSLGSVLSAIASLSMLNY 327
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
G +VH IK G + + +G AL+ Y C D A +V++ L + N+++ G
Sbjct: 328 GSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ 387
Query: 297 MGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS---- 348
G ++ F+ + + + ++ S+ A +D +L M S
Sbjct: 388 NGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFV 447
Query: 349 LNTMISV------IPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
N ++ + + E + + V+WN++I GYVQ +++A ++ M +
Sbjct: 448 ANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGV 507
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ + + AC+ + +QGQ H LVK +++ G+SL+DMY +CG + A+
Sbjct: 508 LPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARD 567
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F S+ NV + AL+ GY+ L EA+ LF+ + + P TF G+L C A +
Sbjct: 568 VFYSMPYRNVVSINALIAGYTMSHL-EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFM 626
Query: 515 VNEGMKIFRSMKSYGVVPTLEHYTCV--VDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+N G +I + +G + + E CV + + S ++E ++ VVW AL
Sbjct: 627 LNLGRQIHGQVMKWGFLSSSE-MVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTAL 685
Query: 573 LSA 575
+S
Sbjct: 686 ISG 688
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 140/585 (23%), Positives = 265/585 (45%), Gaps = 96/585 (16%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G+L AR LF Q+P VV+WN M+ G++K +E++S + ++ +K ++ ++L
Sbjct: 257 GRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVL 316
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S A L+ L G +H +K G + +VGS L+ YA C +++ AK+VF+ L E N +
Sbjct: 317 SAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIV 376
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
LW+ ML G+ Q L ++ ++ F +M+
Sbjct: 377 LWNAMLGGFAQNGL--------------------------------AQEVMEFFSYMKRH 404
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+E+TF S+ ACA L G +H ++IK F + + AL++ Y A
Sbjct: 405 GPQ-PDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKE 463
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-------------------- 311
A + ++ ++ + N++I G + ++A +F R+
Sbjct: 464 ARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACAN 523
Query: 312 -------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
+ ++ + +S+I Y G V ++ +F MP+R+++S+
Sbjct: 524 VKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSI--- 580
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
N++I+GY ++L E+A+ L+ ++ + + T TF+ L C
Sbjct: 581 --------------NALIAGYTMSHL-EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAF 625
Query: 413 SLQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWTAL 470
L G+ +H ++K F S+ V SL+ MY D++ FS + P + WTAL
Sbjct: 626 MLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTAL 685
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
++GY+ +A+ ++ M +I+P+ ATF VL AC + G ++ + G
Sbjct: 686 ISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGF 745
Query: 531 VPTLEHYTC--VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
++ TC ++D+ + G + + + +MP + W +++
Sbjct: 746 --NMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMI 788
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 206/427 (48%), Gaps = 24/427 (5%)
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
LL ++++ YV+C + A F ++ KKDV W ++S Y ++ F M
Sbjct: 77 LLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDH-GLFATVVQSFVCMWN 135
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G PNE+TF V+ AC+ L GK VH + K GF F G LI+ Y C
Sbjct: 136 HGVR-PNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLR 194
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA 326
A V+D N + +LI G + G +A +F+++ + I+ ++I Y
Sbjct: 195 DARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYV 254
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G++ D+++LF ++P+ N V WN MISG+ + E+A+ +
Sbjct: 255 ALGRLADARKLFTQIPNP-----------------NVVAWNVMISGHAKRGFAEEAISFF 297
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
+ ++K + TRS+ + A + L L G ++HA +K + NVYVG++LV+MY++C
Sbjct: 298 LELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKC 357
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
++ A+ F+S+ N+ W A++ G++ +GL E + F M P+ TF +
Sbjct: 358 SKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIF 417
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
SAC ++ G ++ M L +VD+ +SG L EA + + M I D
Sbjct: 418 SACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIH-DN 476
Query: 567 VVWGALL 573
V W A++
Sbjct: 477 VSWNAII 483
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 126/521 (24%), Positives = 214/521 (41%), Gaps = 96/521 (18%)
Query: 4 YATQSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+ Q T+M + + N + ++G L AR F+ M I VSWN ++ GY
Sbjct: 428 FGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYV 487
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ DE+ + M + V +E + ++I+S CA + G+Q HCL++K G +
Sbjct: 488 QEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTC 547
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
GS L+ Y V+C ++ A DVF MP ++
Sbjct: 548 AGSSLIDMY-------------------------------VKCGVVLAARDVFYSMPYRN 576
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
VV LI+GY S E+A+ LF+ ++ G P E TF ++ C G+ +
Sbjct: 577 VVSINALIAGYTMS--HLEEAIHLFQEIQMVGLK-PTEVTFAGLLDGCDGAFMLNLGRQI 633
Query: 241 HGLLIKCGF-EFDESIGGALIEFYCGCEAFDGAMRVYDRLENP-CLNASNSLINGLISMG 298
HG ++K GF E + +L+ Y + F + ++ L+ P L +LI+G
Sbjct: 634 HGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQN 693
Query: 299 RIEDA---------------------------------------ELIFNRLTEANSISYN 319
E A LIF+ + I+ +
Sbjct: 694 HHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCS 753
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
S+I YA G V S ++F +MP R+ + ++WNSMI G +N
Sbjct: 754 SLIDMYAKCGDVKGSLQVFHEMPRRNSV----------------ISWNSMIVGLAKNGYA 797
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTS 438
E+AL+++ M + +I TF + ACS G + +G+ + +V + V
Sbjct: 798 EEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGC 857
Query: 439 LVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
+VD+ R G +N+A+ + + + W+ L+ HG
Sbjct: 858 MVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHG 898
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ L +L +++H+ +K +G +VD+Y +CG+++ AQ +FS + +V AW
Sbjct: 52 AVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWN 111
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
++++ Y HGL + V F M + PN TF VLSAC +N G ++ +
Sbjct: 112 SVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKM 171
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA-CWFWMNMEVGER 587
G ++D+ + +L +A + D + LD V W L++ ME +
Sbjct: 172 GFGFRSFCQGGLIDMYAKCRNLRDA-RLVFDGALNLDTVSWTTLIAGYVRDGFPMEA-VK 229
Query: 588 AAQKMFGLDKKPIS-AYVILSNIYAVLGKWGKKMDIRKRLTHL 629
KM + P A V + N Y LG+ D RK T +
Sbjct: 230 VFDKMQRVGHVPDQIALVTVINAYVALGRLA---DARKLFTQI 269
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 319/594 (53%), Gaps = 27/594 (4%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE-FVGSGLLFFYANCFEIEEAKRVFDEL 145
++ ++ C + N + K++ + ++ + F+ + LL YA ++ +A+ +FD++
Sbjct: 25 YTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM 84
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKL 204
+ + W+ +L Y + + + F +MP +D V + I+G+ S + C +++L+L
Sbjct: 85 LKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGF--SGNSCPQESLEL 142
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F+ M+ G P EYT S++ A A+L GK +HG +I F + I AL + Y
Sbjct: 143 FKRMQREGFE-PTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYA 201
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNS 320
C + A ++D L L + N +I+G G+ E + +++ + + ++ ++
Sbjct: 202 KCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMST 261
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
+I Y G+VD+++R+F + E++ V W +M+ GY +N E
Sbjct: 262 IIAAYCQCGRVDEARRVFSEFK-----------------EKDIVCWTAMMVGYAKNGREE 304
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
AL L+ M I+ T S + +C+ L SL GQ +H + +N+ V ++L+
Sbjct: 305 DALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALI 364
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
DMYS+CG I+DA++ F+ + + NV +W A++ G + +G +A+ LFE ML+Q P+
Sbjct: 365 DMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNV 424
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
TF+G+LSAC+ + +G + F S+ +G+ PTL+HY C+V+LLGR+G + +A IK+
Sbjct: 425 TFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKN 484
Query: 560 MPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKK 619
M + D ++W LLS C ++ E AA+ +F LD Y++LSN+YA +G+W
Sbjct: 485 MAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDV 544
Query: 620 MDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+R + VKK G SWIE+++ VH F+ EDR +P IY L L L
Sbjct: 545 ASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKL 598
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 216/510 (42%), Gaps = 93/510 (18%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I S N ++ ++G + + FD+MP R VS+NT + G+S + ESL L M R
Sbjct: 89 IFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQR 148
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ E T +IL+ AQL+ L GKQIH ++ + F+ + L YA C EIE+
Sbjct: 149 EGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQ 208
Query: 138 AKRVFDELHEDNELLWSLMLVGYV-----------------------------------Q 162
A+ +FD L + N + W+LM+ GY Q
Sbjct: 209 ARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQ 268
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM-RESGENMPNEYTF 221
C + +A VF + +KD+V WT ++ GYAK+ E AL LF M E E P+ YT
Sbjct: 269 CGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGRE-EDALLLFNEMLLEHIE--PDSYTL 325
Query: 222 DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
SV+ +CA+L + G+ VHG I G + + ALI+ Y C
Sbjct: 326 SSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKC--------------- 370
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
G I+DA +FN + N +S+N+MI G A G D+ LFE M
Sbjct: 371 ----------------GFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENM 414
Query: 342 PHRSIISLN-TMISVIPE------MERNPVTWNSMIS--GYVQNNLHEKAL--------- 383
+ N T I ++ +E+ ++S+ + G H +
Sbjct: 415 LQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGR 474
Query: 384 --QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLV 440
Q ++ +A D +S L CS G + ++ HL + P + Y+ L
Sbjct: 475 IEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYI--MLS 532
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTAL 470
+MY+ G D + + + S NV +
Sbjct: 533 NMYASMGRWKDVASVRNLMKSKNVKKFAGF 562
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 7/183 (3%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M + + + A +CGR + AR +F + + +V W M+ GY+K + +++L L
Sbjct: 253 MPDQVTMSTIIAAYCQCGRVDE---ARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLL 309
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ M +++ + T S+++S CA+L SL G+ +H + +G V S L+ Y+
Sbjct: 310 FNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSK 369
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKL 187
C I++A+ VF+ + N + W+ M+VG Q DA ++F M K D V + +
Sbjct: 370 CGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGI 429
Query: 188 ISG 190
+S
Sbjct: 430 LSA 432
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 196/659 (29%), Positives = 325/659 (49%), Gaps = 68/659 (10%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N +T ++ + AR LFD++P R +W ++ G+S+ + L M
Sbjct: 326 SANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKG 385
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
N+ T S++ C+ +L GK +H +L++G + +G+ +L Y C E A+
Sbjct: 386 ACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAE 445
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
RVF+ ++E + + W++M+ Y++ + + D+F ++P KDVV W ++ G + G E
Sbjct: 446 RVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQF--GYE 503
Query: 200 K-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+ AL+ M E G + TF + + L G+ +HG+++K GF D I +
Sbjct: 504 RQALEQLYCMVECGTEF-SVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSS 562
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
L+E YC C D A V + L N+ + + +A +S+
Sbjct: 563 LVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVT---------------CKELKAGIVSW 607
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
M+ GY G+ +D + F M
Sbjct: 608 GLMVSGYVWNGKYEDGLKTFRLM------------------------------------- 630
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+R+L + R T + + AC+ G L+ G+ +HA+ K + YVG+S
Sbjct: 631 ----------VRELVVVDIR-TVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSS 679
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+DMYS+ GS++DA F + PN+ WT++++G + HG G +A+ LFE ML Q I+PN
Sbjct: 680 LIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPN 739
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
TF+GVL+AC AGL+ EG + FR MK +Y + P +EH T +VDL GR+GHL E + FI
Sbjct: 740 EVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFI 799
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
+ I VW + LS+C N+E+G+ ++ + + AYV+LSN+ A +W
Sbjct: 800 FENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWD 859
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ +R + +KK PG SWI+L ++H F + DR++P IY+ L+ L L +
Sbjct: 860 EAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLKEI 918
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 154/345 (44%), Gaps = 51/345 (14%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
YA + LM E +VS N I+ R G + + ++F ++P + VVSWNT++ G ++
Sbjct: 443 YAERVFELM-NEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFG 501
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS 123
++L + M + + TFS L + + L+ + G+Q+H +VLK G+ F+ S
Sbjct: 502 YERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRS 561
Query: 124 GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
L+ Y C ++ A V ++ D L + V K K +V
Sbjct: 562 SLVEMYCKCGRMDNASIVLKDVPLD---------------FLKNGNAGVTCKELKAGIVS 606
Query: 184 WTKLISGYAKSVDGCEKALKLFRWM-RESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W ++SGY + E LK FR M RE + + T ++I ACA G G+ VH
Sbjct: 607 WGLMVSGYVWN-GKYEDGLKTFRLMVREL--VVVDIRTVTTIISACANAGILEFGRHVHA 663
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
K G D +G +LI+ Y + S SL +D
Sbjct: 664 YNHKIGHRIDAYVGSSLIDMY---------------------SKSGSL----------DD 692
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
A IF + E N + + SMI G A++GQ + LFE+M ++ II
Sbjct: 693 AWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGII 737
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
+++ NG +G + + L NS +Y ++ Y +D +++LF+++P
Sbjct: 299 STISNGPPPLGTLHALSVKNGSLQTLNSANY--LLTLYVKSSNMDHARKLFDEIP----- 351
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
+RN TW +ISG+ + E +L+ MR + T S LF
Sbjct: 352 ------------QRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKC 399
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CS +LQ G+ +HA +++ +++V +G S++D+Y +C A+ F ++ +V +W
Sbjct: 400 CSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSW 459
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+++ Y G +++ +F + +D+V
Sbjct: 460 NIMISAYLRAGDVEKSLDMFRRLPYKDVV 488
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 67/172 (38%), Gaps = 2/172 (1%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
LFH+ G G L HA VK + L+ +Y + +++ A+ F I N
Sbjct: 296 LFHSTISNGPPPLGTL-HALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRN 354
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
WT L++G+S G LF M + PN T + C + G +
Sbjct: 355 TQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHA 414
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
M G+ + ++DL + AE + M E D V W ++SA
Sbjct: 415 WMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMN-EGDVVSWNIMISA 465
>gi|325260820|gb|ADZ04639.1| hypothetical protein [Oryza glaberrima]
Length = 674
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 207/645 (32%), Positives = 317/645 (49%), Gaps = 46/645 (7%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T GR G+L A+ LFDQMP R V+SW +L Y+ + + M R N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 82 LNETTFSTIL---------------------SVCAQLNSLIDGKQIHCLVL---KSGYEC 117
S L S A ++ L + +H L + ++
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVYEEMPWQW 161
Query: 118 FEFVGS-GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM 176
+ VGS L+ Y E+ A RVF+ + + + WS M+ G + +S+A VF M
Sbjct: 162 RDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAM 221
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
P+++VV WT +I GY K C L LF MR G + N T + ACA E
Sbjct: 222 PERNVVSWTSMIRGYVKR-GMCRDGLLLFLNMRREGVQV-NTTTLSVALDACAVASLARE 279
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
G +H L+I GFE D +G ++I Y A R +D ++ + + NSLI G +
Sbjct: 280 GIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQ 339
Query: 297 MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+E+A ++F + + +++S+ SM+ G+A G + +S LFE+MP
Sbjct: 340 HDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMP-------------- 385
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
++ V W ++IS ++ N + A++ + M + FS L A + L L Q
Sbjct: 386 ---VKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQ 442
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ HA+ + + + V TSLV MY++CG + +A FSSIS+P++ A +++ +
Sbjct: 443 GRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQ 502
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLE 535
HG +A+ LF M PN TF+G+L+ C RAG V +G F SM+ YGV P E
Sbjct: 503 HGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPE 562
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
HYTC+VDLLGR+G L EA E I MP + W ALLSA N+ + AAQK+
Sbjct: 563 HYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEK 622
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWI 640
D +AY +LS +++ G ++M +L++L K+ PG S I
Sbjct: 623 DPYDATAYTVLSRMFSSAGMEDEEMLKVVQLSNLASKR-PGYSLI 666
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 214/464 (46%), Gaps = 51/464 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S + + ++G + AR +FD MP R VVSW +M+ GY K + L L M R
Sbjct: 195 VISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRR 254
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V++N TT S L CA + +G QIH L++ G+E F+G ++ Y+ + +
Sbjct: 255 EGVQVNTTTLSVALDACAVASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVD 314
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA----- 192
AKR FD + + + + W+ ++ GYVQ +++ +A +F M +KD V WT ++ G+A
Sbjct: 315 AKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWM 374
Query: 193 -KSVDGCEKA---------------------LKLFRWM-RESGEN-MPNEYTFDSVIRAC 228
+SV+ E+ L RW R S E PN F ++ A
Sbjct: 375 RESVELFEQMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSAL 434
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A L +G+ H I G+ FD ++ +L+ Y C A V+ + NP L A N
Sbjct: 435 ASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAIN 494
Query: 289 SLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
S+I + G +EDA +F ++ A N +++ ++ G A G V FE M R
Sbjct: 495 SMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESM--R 552
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+ + E NP + M+ + L +AL++ +M + + ++ L
Sbjct: 553 PVYGV----------EPNPEHYTCMVDLLGRAGLLAEALEMINSMPQ---NDHSDAWAAL 599
Query: 405 FHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRCG 447
A S +L ++ L+ K P+++ Y T L M+S G
Sbjct: 600 LSASSLHSNLAFAKIAAQKLLEKDPYDATAY--TVLSRMFSSAG 641
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 100/259 (38%), Gaps = 36/259 (13%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
Q+ IVS N IT ++ + A LF M + VSW +M+ G++ ES+ L
Sbjct: 323 QQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFE 382
Query: 74 T-------------------------------MHRSNVKLNETTFSTILSVCAQLNSLID 102
M + K N FS +LS A L L
Sbjct: 383 QMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQ 442
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
G+Q H + G+ V + L+ YA C + EA VF + + + + M+ +VQ
Sbjct: 443 GRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQ 502
Query: 163 CNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
+ DA +F KM K + V + +++G A++ ++ F MR PN
Sbjct: 503 HGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARA-GFVQQGYNYFESMRPVYGVEPNP 561
Query: 219 YTFDSVIRACARLGAFCEG 237
+ ++ R G E
Sbjct: 562 EHYTCMVDLLGRAGLLAEA 580
>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 783
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 196/676 (28%), Positives = 334/676 (49%), Gaps = 99/676 (14%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I + +L A LF P++ +SWN ++ GY K E+ +L M +K
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
NE T ++L +C L L+ G+QIH +K+G++ V +GLL YA C I EA+ +
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYL 182
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F+ + + K+ V WT +++GY+++ KA
Sbjct: 183 FETMEGE------------------------------KNNVTWTSMLTGYSQN-GFAFKA 211
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
++ FR +R G N N+YTF SV+ ACA + A G VH ++K GF+ + + ALI+
Sbjct: 212 IECFRDLRREG-NQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALID 270
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN------- 314
Y C + A + + +E + + NS+I G + G I +A +F R+ E +
Sbjct: 271 MYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFT 330
Query: 315 ------------------SISYNSMIK-GYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
S ++ ++K GYA Y V+++ L + R I +++ + V
Sbjct: 331 IPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA--LVDMYAKRGI--MDSALKV 386
Query: 356 IPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
M E++ ++W ++++G N +++AL+L+ MR I + + + A + L L
Sbjct: 387 FEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLL 446
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ GQ +H + +K+ F S++ V SLV MY++CGS+ DA F+S+ ++ WT L+ GY
Sbjct: 447 EFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGY 506
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPT 533
+ + GL+ + + F SM++ YG+ P
Sbjct: 507 A-----------------------------------KNGLLEDAQRYFDSMRTVYGITPG 531
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
EHY C++DL GRSG + E+ + M +E DA VW A+L+A N+E GERAA+ +
Sbjct: 532 PEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLM 591
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
L+ YV LSN+Y+ G+ + ++R+ + + K+PGCSW+E +VH+F ED
Sbjct: 592 ELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSED 651
Query: 654 RNNPNCNVIYATLEHL 669
R +P IY+ ++ +
Sbjct: 652 RRHPRMVEIYSKVDEM 667
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/577 (31%), Positives = 292/577 (50%), Gaps = 64/577 (11%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS---VDGCEKALKLFRWMRESGENMP 216
+V+ DA VF + P + VWT ISG A+ DG ++ F M GE P
Sbjct: 55 WVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADG----MRAFAEMLAEGEATP 110
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
N + +V+R CA +G GK VHG +++ G D + A+++ Y C F+ A RV+
Sbjct: 111 NAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVF 170
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
+ + N I I G I + +F+ ++ S+N++I G G D+
Sbjct: 171 GAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALS 230
Query: 337 LFEKMPHRSIISLNTMIS---------VIPEMER-------------------------- 361
+M ++ + S ++P++ R
Sbjct: 231 HLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYC 290
Query: 362 ---------------NPVT------WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+P+T W++M++GYVQN E+AL L+ M + + R T
Sbjct: 291 KCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFT 350
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ + AC+ +G ++QG+ +H + K ++ + + +++VDMY++CG++ DA++ F
Sbjct: 351 LTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRAC 410
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ N+A WT+++ Y+ HG G A+ LFE M + + PN T VGVLSAC GLV+EG
Sbjct: 411 TKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGEL 470
Query: 521 IFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
F+ M+ YG+VP++EHY C+VDL GRSG L +A+ FI++ I +A+VW LLSAC
Sbjct: 471 YFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLH 530
Query: 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSW 639
+ E + A++K+ L++ +YV+LSNIYA KW ++R + +V+K PG SW
Sbjct: 531 QHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSW 590
Query: 640 IELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
I L + VH F D ++P IYA LE L L +
Sbjct: 591 IHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEI 627
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 162/371 (43%), Gaps = 52/371 (14%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N AI C ++G ++ + LFD+ P+R SWNT++ G + ++LS + M ++
Sbjct: 179 VSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQA 238
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
V N T+ST + L G+Q+H VL + E FV S L+ Y C +E A
Sbjct: 239 GVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAA 298
Query: 139 KRVFDE---LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
VFD L D WS M+ GYVQ +A D+F +M ++ V
Sbjct: 299 ASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAA------------ 346
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+ +T SV ACA +G +G+ VHG + K ++ D +
Sbjct: 347 ---------------------DRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPL 385
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE--- 312
A+++ Y C + A ++DR + S++ S G+ A +F R+T
Sbjct: 386 ASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKM 445
Query: 313 -ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
N I+ ++ + G V + + F++M ++P +E +N ++
Sbjct: 446 TPNEITLVGVLSACSHVGLVSEGELYFKQMQEE--------YGIVPSIEH----YNCIVD 493
Query: 372 GYVQNNLHEKA 382
Y ++ L +KA
Sbjct: 494 LYGRSGLLDKA 504
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/495 (22%), Positives = 214/495 (43%), Gaps = 34/495 (6%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFS 88
R + AR +FD+ P RT W + G ++ ++ + + + M N +
Sbjct: 57 RRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLA 116
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++ CA + + GK++H +L++G + + +L YA C + E A+RVF + E
Sbjct: 117 AVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAER 176
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W++ + +Q + + +F + P +D W +ISG +S + AL R M
Sbjct: 177 DAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAAD-ALSHLRRM 235
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
++G + N YT+ + L G+ +HG ++ E D + +L++ YC C
Sbjct: 236 AQAGV-VFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGL 294
Query: 269 FDGAMRVYDR---LENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSM 321
+ A V+D L A ++++ G + GR E+A +F R+ A+ + S+
Sbjct: 295 LEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSV 354
Query: 322 IKGYAVYGQVDDSK-------RLFEKMPHRSIISLNTMISVIPEME-----------RNP 363
A G V+ + +L+ K+ ++ M + +E +N
Sbjct: 355 AAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNI 414
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
W SM+ Y + A++L+ M + T + ACS +G + +G+L
Sbjct: 415 AVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQ 474
Query: 424 LVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA--WTALMNGYSHHGLG 480
+ + ++ +VD+Y R G ++ A+ +F ++ N A W L++ H
Sbjct: 475 MQEEYGIVPSIEHYNCIVDLYGRSGLLDKAK-NFIEENNINHEAIVWKTLLSACRLHQHN 533
Query: 481 SEAVLLFE--IMLEQ 493
A L E + LEQ
Sbjct: 534 EYAKLASEKLVQLEQ 548
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 18/227 (7%)
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
G +G L A L P E S++ + R +DA+ F + WT +
Sbjct: 29 GRAARGGSLEARLATVPHER-----ASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTI 83
Query: 472 NGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
+G + G ++ + F E++ E + PNA V+ C G V G ++ M GV
Sbjct: 84 SGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGV 143
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE-RAA 589
+ V+D+ + G A M E DAV W + AC ++ G+ +
Sbjct: 144 HLDVVLCNAVLDMYAKCGQFERARRVFGAMA-ERDAVSWNIAIGAC-----IQSGDILGS 197
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPG 636
++F D+ P+ + I + L + G D L+HL G
Sbjct: 198 MQLF--DESPLRDTTSWNTIISGLMRSGHAADA---LSHLRRMAQAG 239
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 208/704 (29%), Positives = 338/704 (48%), Gaps = 119/704 (16%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTM---LCGYSKWAKFDESLSLVSTMHRSNVKLN 83
+CG G + +FD++ R VSWN++ LC + KW + +L M +V+ +
Sbjct: 141 KCGDFGAVY---KVFDRISERNQVSWNSLISSLCSFEKW---EMALEAFRCMLDEDVEPS 194
Query: 84 ETTFSTILSVCAQL---NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
T ++ C+ L+ GKQ+H L+ G E F+ + L+ Y ++ +K
Sbjct: 195 SFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSK- 252
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+L+G + +D+V W ++S ++ E
Sbjct: 253 ---------------VLLGSFE---------------GRDLVTWNTVLSSLCQNEQFLE- 281
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES--IGGA 258
AL+ R M G P+ +T SV+ AC+ L GK +H +K G DE+ +G A
Sbjct: 282 ALEYLREMVLEGVE-PDGFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSA 339
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-----A 313
L++ YC C+ RV+D + + + N++I G E+A L+F + E A
Sbjct: 340 LVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLA 399
Query: 314 NSISY-----------------------------------NSMIKGYAVYGQVDDSKRLF 338
NS + N+++ Y+ G++D +KR+F
Sbjct: 400 NSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIF 459
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR-------- 390
KM R + VTWN++I+GYV + HE AL + M+
Sbjct: 460 GKMEDRDL-----------------VTWNTIITGYVFSERHEDALLMLHKMQILERKASE 502
Query: 391 ---KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
++++ T + +C+ L +L +G+ +HA+ +K ++V VG++LVDMY++CG
Sbjct: 503 RASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCG 562
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
+ ++ F I NV W ++ Y HG +A+ + +M+ Q + PN TF+ V +
Sbjct: 563 CLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFA 622
Query: 508 ACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD- 565
AC +G+VNEG+KIF +M K YGV P+ +HY CVVDLLGR+G + EA + I +P D
Sbjct: 623 ACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDK 682
Query: 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKR 625
A W +LL AC N+E+GE AAQ + L+ S YV+L+NIY+ G W K ++R+
Sbjct: 683 AGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRN 742
Query: 626 LTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+ V+K+PGCSWIE VH F D ++P + LE L
Sbjct: 743 MKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETL 786
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/549 (24%), Positives = 236/549 (42%), Gaps = 76/549 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N + G+ G+L +++ L R +V+WNT+L + +F E+L + M V+
Sbjct: 236 NTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVE 295
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG-YECFEFVGSGLLFFYANCFEIEEAKR 140
+ T S++L C+ L L GK++H LK+G + FVGS L+ Y NC ++ R
Sbjct: 296 PDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCR 355
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VFD + + LW+ M+ GY Q + +D E+
Sbjct: 356 VFDGMFDRKIGLWNAMITGYAQ-----NEYD---------------------------EE 383
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL LF M ES + N T V+ AC R GAF + + +HG ++K G + D + AL+
Sbjct: 384 ALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALM 443
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT--------- 311
+ Y D A R++ ++E+ L N++I G + R EDA L+ +++
Sbjct: 444 DMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASER 503
Query: 312 ------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME----- 360
+ NSI+ +++ A + K + ++ + + S + +M
Sbjct: 504 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 563
Query: 361 -------------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
RN +TWN ++ Y + + A+ + M + TF +F A
Sbjct: 564 LQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAA 623
Query: 408 CSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSISS--PNV 464
CS G + +G + ++ K E + +VD+ R G + +A + I
Sbjct: 624 CSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKA 683
Query: 465 AAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
AW++L+ H +G A I LE ++ + + S+ AGL + ++
Sbjct: 684 GAWSSLLGACRIHNNLEIGEIAAQNL-IQLEPNVASHYVLLANIYSS---AGLWYKATEV 739
Query: 522 FRSMKSYGV 530
R+MK+ GV
Sbjct: 740 RRNMKAQGV 748
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 217/525 (41%), Gaps = 54/525 (10%)
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEA 138
+K + F +L A L + GKQIH V K GY V + L+ Y C +
Sbjct: 89 IKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 148
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV------VVWTKLISGYA 192
+VFD + E N++ W+ ++ A + F M +DV +V L
Sbjct: 149 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNF 208
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+G ++ + GE N + ++++ ++G KV+ G FE
Sbjct: 209 PMPEGLLMGKQVHAYGLRKGE--LNSFIINTLVAMYGKMGKLASSKVLLG-----SFEGR 261
Query: 253 ESIG-GALIEFYCGCEAFDGAMR-----VYDRLENPCLNASNSLIN----GLISMGRIED 302
+ + ++ C E F A+ V + +E S+ L ++ G+
Sbjct: 262 DLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELH 321
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
A + N + NS ++++ Y QV R+F+ M R I
Sbjct: 322 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKI---------------- 365
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACSCLGSLQQGQLLH 421
WN+MI+GY QN E+AL L++ M + A + +T + + AC G+ + + +H
Sbjct: 366 -GLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIH 424
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
+VK + + +V +L+DMYSR G I+ A+ F + ++ W ++ GY
Sbjct: 425 GFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHE 484
Query: 482 EAVLLFEIM--LEQ---------DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
+A+L+ M LE+ + PN+ T + +L +C + +G +I +
Sbjct: 485 DALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL 544
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + +VD+ + G L + + +PI + + W ++ A
Sbjct: 545 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIVMA 588
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+P W ++ V++NL +A+ Y+ M L I F L A + L + G+ +H
Sbjct: 57 SPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIH 116
Query: 422 AHLVKTPFE-SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
AH+ K + +V V +LV++Y +CG F IS N +W +L++
Sbjct: 117 AHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW 176
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP-TLEHY-- 537
A+ F ML++D+ P++ T V V AC + EG+ + + + +YG+ L +
Sbjct: 177 EMALEAFRCMLDEDVEPSSFTLVSVALACSNFPM-PEGLLMGKQVHAYGLRKGELNSFII 235
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+V + G+ G L ++ + D V W +LS+
Sbjct: 236 NTLVAMYGKMGKLASSKVLLGSFEGR-DLVTWNTVLSS 272
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/509 (35%), Positives = 271/509 (53%), Gaps = 40/509 (7%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKS-VDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
A +F +MP+++ W +I G+++S D A+ LF M PN +TF SV++A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
CA+ G EGK +HGL +K GF DE + L+ Y C F RV L
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMC-GFMKDARV--------LFYK 188
Query: 288 NSLINGLISMG--RIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
N + ++ M R D E++ +N MI GY G ++ LF+KM RS
Sbjct: 189 NIIEKDMVVMTDRRKRDGEIVL----------WNVMIDGYMRLGDCKAARMLFDKMRQRS 238
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
++S WN+MISGY N + A++++ M+K I T +
Sbjct: 239 VVS-----------------WNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
A S LGSL+ G+ LH + + + +G++L+DMYS+CG I A F + NV
Sbjct: 282 PAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVI 341
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
W+A++NG++ HG +A+ F M + + P+ ++ +L+AC GLV EG + F M
Sbjct: 342 TWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQM 401
Query: 526 KSY-GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
S G+ P +EHY C+VDLLGRSG L EAEEFI +MPI+ D V+W ALL AC N+E+
Sbjct: 402 VSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEM 461
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
G+R A + + AYV LSN+YA G W + ++R R+ +++KDPGCS I+++
Sbjct: 462 GKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDG 521
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+H F VED ++P I + L ++ L
Sbjct: 522 VLHEFVVEDDSHPKAKEINSMLVEISDKL 550
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 223/438 (50%), Gaps = 49/438 (11%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST------MHRSNVKLNETTFSTI 90
A +F+QMP R SWNT++ G+S+ DE +L++ M V+ N TF ++
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSE---SDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF-------- 142
L CA+ + +GKQIH L LK G+ EFV S L+ Y C +++A+ +F
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 143 -----DELHEDNEL-LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
D D E+ LW++M+ GY++ A +F KM ++ VV W +ISGY S++
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY--SLN 252
Query: 197 GCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
G K A+++FR M++ G+ PN T SV+ A +RLG+ G+ +H G D+ +
Sbjct: 253 GFFKDAVEVFREMKK-GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVL 311
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-- 313
G ALI+ Y C + A+ V++RL + +++ING G+ DA F ++ +A
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 314 --NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
+ ++Y +++ + G V++ +R F +M +S++ + P +E + M+
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEGRRYFSQM-----VSVD---GLEPRIEH----YGCMVD 419
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFE 430
++ L ++A + + M I + L AC G+++ G+ + L+ P +
Sbjct: 420 LLGRSGLLDEAEEFILNM---PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHD 476
Query: 431 SNVYVGTSLVDMYSRCGS 448
S YV +L +MY+ G+
Sbjct: 477 SGAYV--ALSNMYASQGN 492
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV N I R G AR LFD+M R+VVSWNTM+ GYS F +++ + M +
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+++ N T ++L ++L SL G+ +H SG + +GS L+ Y+ C IE+
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
A VF+ L +N + WS M+ G+ DA D F KM + V
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 198/690 (28%), Positives = 341/690 (49%), Gaps = 100/690 (14%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
R G + A+ +F QM R V+ N ++ G ++ + +E+ + M + V++N +
Sbjct: 397 ARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSESLV 455
Query: 89 TILSVCAQLNSLIDGK----QIHCLVLKSGY-ECFEFVGSGLLFFYANCFEIEEAKRVFD 143
+LS + ++L +GK ++H + +SG + +G+ L+ Y C I+
Sbjct: 456 VLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAID------- 508
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+A VF MP KD V W +ISG + + E+A+
Sbjct: 509 ------------------------NACSVFQLMPSKDTVSWNSMISGLDHN-ERFEEAVS 543
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
F M+ +G +P+ ++ S + +C+ LG G+ +HG K G + D S+ AL+ Y
Sbjct: 544 CFHTMKRNGM-VPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLY 602
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGL----------------------------- 294
++ + +V+ ++ + NS I L
Sbjct: 603 AETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTF 662
Query: 295 ------------ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
+ +G A ++ + + N+I N+++ Y Q++D + +F +M
Sbjct: 663 INILAAVSSFSVLGLGHQIHALILKYSVADDNAIE-NALLAFYGKCEQMEDCEIIFSRMS 721
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
R R+ V+WNSMISGY+ + + KA+ L M + TF+
Sbjct: 722 ER----------------RDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFA 765
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ AC+ + +L++G +HA V+ ES+V VG++LVDMY++CG I+ A F +
Sbjct: 766 TVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVR 825
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
N+ +W ++++GY+ HG G +A+ +F M + P+ TFVGVLSAC GLV+EG K F
Sbjct: 826 NIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHF 885
Query: 523 RSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF--W 579
+SM + YG+ P +EH++C+VDLLGR+G + + E+FIK MP++ + ++W +L AC
Sbjct: 886 KSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANG 945
Query: 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSW 639
N E+G+RAA+ + L+ + YV+LSN++A G W ++ R + VKKD GCSW
Sbjct: 946 RNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSW 1005
Query: 640 IELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+ + VH F D+ +P IY L+ L
Sbjct: 1006 VNMKDGVHLFVAGDQTHPEKEKIYEKLKEL 1035
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 150/584 (25%), Positives = 249/584 (42%), Gaps = 73/584 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G LV+AR LFD+MP + +VSW+ ++ GY++ DE+ SL + S + N +
Sbjct: 187 RIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGS 246
Query: 90 ILSVCAQLNS--LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF-EIEEAKRVFDELH 146
L C Q S + G QIH + K + + L+ Y++C I++A RVFDE+
Sbjct: 247 ALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIK 306
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
N V W +IS Y + D A KLF
Sbjct: 307 FRNS-------------------------------VTWNSIISVYCRRGDAVS-AFKLFS 334
Query: 207 WMRESGENM---PNEYTFDSVIRACARLGAFCEGKVVHGLLI---KCGFEFDESIGGALI 260
M+ G + PNEYT S++ A L A C ++ +L K GF D +G AL+
Sbjct: 335 VMQMEGVELNLRPNEYTLCSLVTAACSL-ADCGLVLLEQMLTRIEKSGFLRDLYVGSALV 393
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR---LTEANSIS 317
+ D A ++ ++ + N L+ GL + E+A +F L E NS S
Sbjct: 394 NGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSES 453
Query: 318 YNSMIKGYAVYGQVDDSKR--------LFEKMPHRSIISLNTMI--------------SV 355
++ + + + + KR LF + IS+ + SV
Sbjct: 454 LVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSV 513
Query: 356 IPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL--FHACSCLG 412
M ++ V+WNSMISG N E+A+ + TM++ + S FSV+ +CS LG
Sbjct: 514 FQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGM--VPSNFSVISTLSSCSSLG 571
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
L G+ +H K + +V V +L+ +Y+ SIN+ Q F + + +W + +
Sbjct: 572 WLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIG 631
Query: 473 GYSHHGLGS-EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
+ + +A+ F M++ PN TF+ +L+A ++ G +I + Y V
Sbjct: 632 ALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVA 691
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ G+ + + E M D V W +++S
Sbjct: 692 DDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISG 735
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 202/494 (40%), Gaps = 91/494 (18%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N + G+ + A ++F MP + VSWN+M+ G +F+E++S TM R+ +
Sbjct: 495 NALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMV 554
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ + + LS C+ L L G+QIH K G + V + LL YA I E ++V
Sbjct: 555 PSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKV 614
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F +MP+ D V W I AK +A
Sbjct: 615 -------------------------------FFQMPEYDQVSWNSFIGALAKYEASVLQA 643
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
LK F M ++G PN TF +++ A + G +H L++K D +I AL+
Sbjct: 644 LKYFLEMMQAGWR-PNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLA 702
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDA-ELIFNRLT-------- 311
FY CE + ++ R+ S NS+I+G + G + A +L++ +
Sbjct: 703 FYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGF 762
Query: 312 ------------------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
E++ + ++++ YA G++D + R FE M
Sbjct: 763 TFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELM 822
Query: 342 PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
P R+I S WNSMISGY ++ +KAL+++ M++ TF
Sbjct: 823 PVRNIYS-----------------WNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTF 865
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ ACS +G + +G + + + + +VD+ R G + + ++
Sbjct: 866 VGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMP 925
Query: 461 -SPNVAAWTALMNG 473
PN+ W ++
Sbjct: 926 MDPNILIWRTVLGA 939
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/531 (22%), Positives = 233/531 (43%), Gaps = 105/531 (19%)
Query: 98 NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
+SL D +H + K+G+ F + L+ Y + A+++FDE
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDE------------- 200
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
MP+K++V W+ LISGY ++ ++A LF+ + SG +PN
Sbjct: 201 ------------------MPQKNLVSWSCLISGYTQN-RMPDEACSLFKGVISSGL-LPN 240
Query: 218 EYTFDSVIRACARLGA--FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE-AFDGAMR 274
+ S +RAC + G+ G +H + K D + L+ Y C + D A R
Sbjct: 241 HFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHR 300
Query: 275 VYDRLENPCLNASNSLIN------------GLISMGRIEDAEL--------IFNRLTEAN 314
V+D ++ NS+I+ L S+ ++E EL + + +T A
Sbjct: 301 VFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAAC 360
Query: 315 SIS-------------------------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
S++ ++++ G+A YG +D +K +F++M
Sbjct: 361 SLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQM-------- 412
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
+RN VT N ++ G + + E+A +++ M+ L ++ + VL +
Sbjct: 413 ---------YDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTFT 462
Query: 410 CLGSLQQ----GQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
+L++ GQ +HA+L ++ ++ + +G +LV+MY +C +I++A + F + S +
Sbjct: 463 EFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDT 522
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
+W ++++G H+ EAV F M +VP+ + + LS+C G + G +I
Sbjct: 523 VSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGE 582
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+G+ + ++ L + ++E ++ MP E D V W + + A
Sbjct: 583 GFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGA 632
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 146/327 (44%), Gaps = 39/327 (11%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW-AKFDESLSLVSTMHRSN 79
+N +T + + +F QMP VSWN+ + +K+ A ++L M ++
Sbjct: 595 SNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAG 654
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ N TF IL+ + + L G QIH L+LK + + LL FY C ++E+ +
Sbjct: 655 WRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCE 714
Query: 140 RVFDELHE-DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+F + E +E+ W+ M+ GY+ ++ A D +VW + G + +DG
Sbjct: 715 IIFSRMSERRDEVSWNSMISGYLHSGILHKAMD----------LVWPMMQRG--QKLDG- 761
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+TF +V+ ACA + G VH ++ E D +G A
Sbjct: 762 --------------------FTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSA 801
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----AN 314
L++ Y C D A R ++ + + + NS+I+G G + A IF R+ + +
Sbjct: 802 LVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPD 861
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKM 341
+++ ++ + G VD+ + F+ M
Sbjct: 862 HVTFVGVLSACSHVGLVDEGYKHFKSM 888
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ +V + + + G++ A F+ MP+R + SWN+M+ GY++ ++L + +
Sbjct: 793 ESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTR 852
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
M + + TF +LS C+ H ++ GY+ F+ +G
Sbjct: 853 MKQHGQSPDHVTFVGVLSACS-----------HVGLVDEGYKHFKSMG 889
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 187/614 (30%), Positives = 306/614 (49%), Gaps = 55/614 (8%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TF+++L +CA L G+ +H + G + L YA C +A+R
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARR----- 281
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
VF +MP +D V W L++GYA++ E A+ +
Sbjct: 282 --------------------------VFDRMPARDRVAWNALVAGYARN-GLAEAAVGMV 314
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M+E P+ T SV+ ACA A + VH ++ GF+ ++ A+++ YC
Sbjct: 315 VRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCK 374
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSM 321
C A D A +V+D +++ + N++I G G +A +F R+ + +S +
Sbjct: 375 CGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAA 434
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIIS----LNTMISVIPEMERNP-------------- 363
+ G +D+ +R+ E + + S +N +I++ + +R
Sbjct: 435 LHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTR 494
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
V+WN+MI G QN E A++L+ M+ + T + A + + Q + +H +
Sbjct: 495 VSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGY 554
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
++ + +VYV T+L+DMY++CG ++ A++ F+S +V W A+++GY HG G A
Sbjct: 555 SIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVA 614
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVD 542
V LFE M VPN TF+ VLSAC AGLV+EG + F SMK YG+ P +EHY +VD
Sbjct: 615 VELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVD 674
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISA 602
LLGR+G LHEA FI+ MP+E V+GA+L AC N+E+ E +AQ++F L+ +
Sbjct: 675 LLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVY 734
Query: 603 YVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
+V+L+NIYA W +R + ++K PG S ++L + +H F N+ I
Sbjct: 735 HVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDI 794
Query: 663 YATLEHLTANLNSV 676
YA L L + +V
Sbjct: 795 YARLAKLIEEIKAV 808
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 229/504 (45%), Gaps = 75/504 (14%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-VKLNE 84
+C R G AR +FD+MP R V+WN ++ GY++ + ++ +V M + + +
Sbjct: 271 AKCRRPGD---ARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDA 327
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
T ++L CA +L +++H ++ G++ V + +L Y C ++ A++VFD
Sbjct: 328 VTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDG 387
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ + N + W+ M+ G YA++ D E AL L
Sbjct: 388 MQDRNSVSWNAMIKG-------------------------------YAENGDATE-ALAL 415
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F+ M G ++ + + + + AC LG EG+ VH LL++ G E + ++ ALI YC
Sbjct: 416 FKRMVGEGVDV-TDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYC 474
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNS 320
C+ D A +V+D L + N++I G G EDA +F+R+ + +S + S
Sbjct: 475 KCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVS 534
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNT-----MISVIPEM---------------- 359
+I A D S L + H I L+ +++ + +M
Sbjct: 535 IIPALA-----DISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNS 589
Query: 360 --ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
+R+ +TWN+MI GY + + A++L+ M+ +TF + ACS G + +G
Sbjct: 590 ARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEG 649
Query: 418 QLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYS 475
Q + + + E + ++VD+ R G +++A + + P ++ + A++
Sbjct: 650 QEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACK 709
Query: 476 HHG---LGSE-AVLLFEIMLEQDI 495
H L E A +FE+ E+ +
Sbjct: 710 LHKNVELAEESAQRIFELEPEEGV 733
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 145/331 (43%), Gaps = 23/331 (6%)
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL F M + + P TF S+++ CA G+ VH L G + AL
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-------- 312
Y C A RV+DR+ A N+L+ G G E A + R+ E
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDA 327
Query: 313 ------------ANSISYNSMIKGYAVYGQVDDSKRLFEKM--PHRSIISLNTMISVIPE 358
A ++ + +AV G D+ + + + ++++ V
Sbjct: 328 VTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDG 387
Query: 359 ME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
M+ RN V+WN+MI GY +N +AL L+ M +D T + HAC LG L +G
Sbjct: 388 MQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEG 447
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+ +H LV+ ESNV V +L+ MY +C + A F + +W A++ G + +
Sbjct: 448 RRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQN 507
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
G +AV LF M +++ P++ T V ++ A
Sbjct: 508 GSSEDAVRLFSRMQLENVKPDSFTLVSIIPA 538
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/595 (30%), Positives = 320/595 (53%), Gaps = 27/595 (4%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE-FVGSGLLFFYANCFEIEEAKRVFDE 144
++ ++ C + N + K++ + ++ + F+ + LL YA ++ +A+ +FD+
Sbjct: 24 AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALK 203
+ + + W+ +L Y + + + F +MP +D V + I+G+ S + C +++L+
Sbjct: 84 MLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGF--SGNSCPQESLE 141
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
LF+ M+ G P EYT S++ A A+L GK +HG +I F + I AL + Y
Sbjct: 142 LFKRMQREGFE-PTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMY 200
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYN 319
C + A ++D L L + N +I+G G+ E + +++ + + ++ +
Sbjct: 201 AKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMS 260
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
++I Y G+VD+++R+F + E++ V W +M+ GY +N
Sbjct: 261 TIIAAYCQCGRVDEARRVFSEFK-----------------EKDIVCWTAMMVGYAKNGRE 303
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
E AL L+ M I+ T S + +C+ L SL GQ +H + +N+ V ++L
Sbjct: 304 EDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSAL 363
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+DMYS+CG I+DA++ F+ + + NV +W A++ G + +G +A+ LFE ML+Q P+
Sbjct: 364 IDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDN 423
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
TF+G+LSAC+ + +G + F S+ + +G+ PTL+HY C+V+LLGR+G + +A IK
Sbjct: 424 VTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIK 483
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
+M + D ++W LLS C ++ E AA+ +F LD Y++LSN+YA +G+W
Sbjct: 484 NMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKD 543
Query: 619 KMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+R + VKK G SWIE+++ VH F+ EDR +P IY L L L
Sbjct: 544 VASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKL 598
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 217/511 (42%), Gaps = 99/511 (19%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N ++ ++G + + FD+MP R VS+NT + G+S + ESL L M R
Sbjct: 91 SWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREG 150
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ E T +IL+ AQL L GKQIH ++ + F+ + L YA C EIE+A+
Sbjct: 151 FEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQAR 210
Query: 140 RVFDELHEDNELLWSLMLVGYV-----------------------------------QCN 164
+FD L + N + W+LM+ GY QC
Sbjct: 211 WLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCG 270
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM-RESGENMPNEYTFDS 223
+ +A VF + +KD+V WT ++ GYAK+ E AL LF M E E P+ YT S
Sbjct: 271 RVDEARRVFSEFKEKDIVCWTAMMVGYAKNGRE-EDALLLFNEMLLEHIE--PDSYTLSS 327
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
V+ +CA+L + G+ VHG I G + + ALI+ Y C
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKC----------------- 370
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
G I+DA +FN + N +S+N+MI G A G D+ LFE M
Sbjct: 371 --------------GFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ 416
Query: 344 RSIISLN-TMISVIPE------MERNPVTWNS----------------MISGYVQNNLHE 380
+ N T I ++ +E+ ++S M++ + E
Sbjct: 417 QKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIE 476
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSL 439
+A+ L ++ +A D +S L CS G + ++ HL + P + Y+ L
Sbjct: 477 QAVAL---IKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYI--ML 531
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
+MY+ G D + + + S NV +
Sbjct: 532 SNMYASMGRWKDVASVRNLMKSKNVKKFAGF 562
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 7/183 (3%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M + + + A +CGR + AR +F + + +V W M+ GY+K + +++L L
Sbjct: 253 MPDQVTMSTIIAAYCQCGRVDE---ARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLL 309
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ M +++ + T S+++S CA+L SL G+ +H + +G V S L+ Y+
Sbjct: 310 FNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSK 369
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKL 187
C I++A+ VF+ + N + W+ M+VG Q DA ++F M K D V + +
Sbjct: 370 CGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGI 429
Query: 188 ISG 190
+S
Sbjct: 430 LSA 432
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 202/671 (30%), Positives = 334/671 (49%), Gaps = 94/671 (14%)
Query: 2 KLYATQSQTLMTQETLI-VSTNKAITECGRNGQLVTARNL------FDQMPIRTVVSWNT 54
+L Q+Q ++T L ++++ I+ C + +RNL + + V SWN
Sbjct: 68 QLKQIQAQMILTGLILDGFASSRLISFCA----ISESRNLDYCIKILNNLQNPNVFSWNA 123
Query: 55 MLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS 113
++ G + + L L M R+ + + T+S + VCA L G +I VLK
Sbjct: 124 VIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFEILGQVLKM 183
Query: 114 GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
G++ ++ +G++ + E A +VFDE + + W+ ++ GYV+
Sbjct: 184 GFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVR----------- 232
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
+ P++ + ++ ++I+ + K P+E T V+ ACA+L +
Sbjct: 233 RRQPREAMGIYQQMITEHVK----------------------PDEVTMIGVVSACAQLES 270
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
G+ +H + + G S+ AL++ Y C
Sbjct: 271 LKLGREIHRYIEESGLNLKISLVNALMDMYVKC--------------------------- 303
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
G +E +++F+ + + +S+ +MI GYA G +D + +LF MP
Sbjct: 304 ----GDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMP----------- 348
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
E+N V WN+MI VQ NL +AL+L+ M+ + + T ACS LG+
Sbjct: 349 ------EKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGA 402
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L G H ++ K +V +GT+L+DMY++CG++ A F+ + N WTA++ G
Sbjct: 403 LDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGG 462
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVP 532
+ +G ++A+ F M++ ++P+ TF+GVL+AC GLV EG K F MKS + + P
Sbjct: 463 LALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSP 522
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+HY+C+V+LLGR+G L EAEE IK MP+E DA+VWGAL AC N+ +GERAA K+
Sbjct: 523 QPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKL 582
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
LD YV+L+N+Y GKW + +IRK + V+K PG S IE+N ++ F V
Sbjct: 583 LDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGIINEFIVR 642
Query: 653 DRNNPNCNVIY 663
D+++P IY
Sbjct: 643 DKSHPQSEQIY 653
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 180/406 (44%), Gaps = 57/406 (14%)
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA--FDGAMRVYDRLENPCLNASNSL 290
+F + K + +I G D LI F E+ D +++ + L+NP + + N++
Sbjct: 65 SFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQNPNVFSWNAV 124
Query: 291 INGLISMGRIEDAELIFNR-LTEA----NSISYNSMIK----------GYAVYGQV---- 331
I G + + +++ R LT A ++ +Y+ + K G+ + GQV
Sbjct: 125 IRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFEILGQVLKMG 184
Query: 332 -DDSKRLFEKMPHR--SIISLNTMISVIPE-MERNPVTWNSMISGYVQNNLHEKALQLYM 387
D L+ + H S+ V E R+ V+WNS+I+GYV+ +A+ +Y
Sbjct: 185 FDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQ 244
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
M + T + AC+ L SL+ G+ +H ++ ++ + + +L+DMY +CG
Sbjct: 245 QMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCG 304
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV----------- 496
+ + F ++ V +WT ++ GY+ +GL A LF M E+++V
Sbjct: 305 DLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQ 364
Query: 497 --------------------PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
P+ T + LSAC + G ++ GM +K + + +
Sbjct: 365 ANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVAL 424
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
T ++D+ + G++ +A + +MP +++ W A++ + N+
Sbjct: 425 GTALIDMYAKCGNMTKALQVFNEMP-RRNSLTWTAIIGGLALYGNV 469
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 205/700 (29%), Positives = 331/700 (47%), Gaps = 122/700 (17%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++G L AR +FD RTVV+W TM+ YSK +F ++ L + MHRS + + T+ T
Sbjct: 86 KSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYIT 145
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L+ C L + Q H ++K G+ V + LL Y ++ A+R+F E+
Sbjct: 146 LLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEM---- 201
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWM 208
C S +F+V +I+GYA +G E+A++LF M
Sbjct: 202 -------------CGWDSVSFNV--------------MITGYAN--NGLNEEAIELFVEM 232
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ G P+++TF +VI A L G+ +HG ++K F + +G A ++FY
Sbjct: 233 QNLGFK-PSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYS---- 287
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
++ C+N L FN + E + +SYN +I YA
Sbjct: 288 -----------KHDCVNEVRKL----------------FNEMPELDGVSYNVIITAYAWV 320
Query: 329 GQVDDSKRLFEKMP----HRSIISLNTMISVI----------------------PEME-- 360
G+V +S LF+++ R TM+S+ P+
Sbjct: 321 GKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVS 380
Query: 361 -------------------------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
R+ V W +MIS VQ LHE L+L+ MR+ +
Sbjct: 381 NSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVS 440
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
++TF+ + A + L S+ G+ LH+ ++++ F NVY G +L+DMY+ C SI DA +
Sbjct: 441 ADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKT 499
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F +S NV W AL++ Y+ +G G + FE M+ P++ +F+ +L+AC LV
Sbjct: 500 FEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLV 559
Query: 516 NEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
EG+K F M Y + P EHYT +VD L RSG EAE+ + MP E D +VW ++L+
Sbjct: 560 EEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLN 619
Query: 575 ACWFWMNMEVGERAAQKMFGLDK-KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
+C N + +AA ++F + + + YV +SNI+A G+W + ++K + V+K
Sbjct: 620 SCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRK 679
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
P SW+E+ +VH FS D +P I +E L +
Sbjct: 680 LPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQM 719
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 132/300 (44%), Gaps = 19/300 (6%)
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
+P + N +I L G++ A + +++ NS S + +I GY G + ++R+F+
Sbjct: 40 DPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDD 99
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
R++ V W +MI Y ++N A +L+ M + T
Sbjct: 100 TDERTV-----------------VAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVT 142
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ L C+ L ++ HA +VK N V +L+D Y + G ++ A+ F +
Sbjct: 143 YITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMC 202
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ ++ ++ GY+++GL EA+ LF M P+ TF V+SA V G +
Sbjct: 203 GWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQ 262
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWM 580
I + + + +D + ++E + +MP ELD V + +++A + W+
Sbjct: 263 IHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMP-ELDGVSYNVIITA-YAWV 320
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 27/248 (10%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N + + G+ A +F ++ R+ V W M+ + + L L M R+NV
Sbjct: 380 SNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANV 439
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
++ TF+ +L A L S++ GKQ+H V++SG+ + G LL YANC I++A +
Sbjct: 440 SADQATFACVLKASANLASILLGKQLHSCVIRSGFMNV-YSGCALLDMYANCASIKDAIK 498
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS------ 194
F+E+ E N + W+ +L Y Q F +M ++SGY
Sbjct: 499 TFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEM----------IMSGYQPDSVSFLC 548
Query: 195 -VDGC------EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
+ C E+ LK F M P + +++ A R G F E + + G +
Sbjct: 549 ILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQM--- 605
Query: 248 GFEFDESI 255
FE DE +
Sbjct: 606 PFEPDEIV 613
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 192/656 (29%), Positives = 331/656 (50%), Gaps = 56/656 (8%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
NG + AR FD+M + V WN M+ GY + + D ++ L M S K + TF+ +
Sbjct: 58 NGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACV 117
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
LS+ + G+Q+H LV++SG + VG+ L+ Y+ ++ +A+++FD
Sbjct: 118 LSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFD------- 170
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
MP+ D+VVW ++I GY ++ + A LF M
Sbjct: 171 ------------------------MMPQIDLVVWNRMIGGYVQN-GFMDDASMLFNEMIS 205
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+G P+ TF S + + A + + K +HG +++ G D + ALI+ Y C
Sbjct: 206 AGIK-PDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAV 264
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA 326
A ++++ + ++I+G + G +DA IF L + N+++++S++ A
Sbjct: 265 MACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACA 324
Query: 327 VYGQVDDSKRLF---------EKMPHRSII--------SLNTMISVIPEME-RNPVTWNS 368
+ + L EK P S I L+ + + ++ + WNS
Sbjct: 325 GLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNS 384
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
+I+ + Q+ E+A+ L+ M + T S AC+ + +L G+ +H ++K
Sbjct: 385 IITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGA 444
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
FES+++ ++L++MY++CG +N A+ F+ + N AW +++ Y +HG ++++ LF
Sbjct: 445 FESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFH 504
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
MLE+ I P+ TF+ +LS+C AG V +G++ FR M + YG+ +EHY C+ DL GR+
Sbjct: 505 NMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRA 564
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
GHL EA E I MP A VWG LL AC N+E+ E A++ + L+ K Y++L+
Sbjct: 565 GHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLT 624
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
++ A GKW I+ + V+K PGCSWIE+N+ F D ++P IY
Sbjct: 625 HVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHPESPQIY 680
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 239/515 (46%), Gaps = 56/515 (10%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
++ TF ++ C LN++ GK I ++L+ G++ FV S L+ YA+ IE+A+R F
Sbjct: 9 DKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFF 68
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
D KM KD V+W +I+GY + + + A+
Sbjct: 69 D-------------------------------KMIDKDCVLWNVMINGYVQCGES-DSAI 96
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
KLF+ M S E P+ TF V+ G+ +HGL+++ G +F +G L+
Sbjct: 97 KLFKDMMSS-EAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTV 155
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISY 318
Y A +++D + L N +I G + G ++DA ++FN + A +SI++
Sbjct: 156 YSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITF 215
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------E 360
S + A + K + + +I + S + ++ +
Sbjct: 216 TSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTK 275
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
+ V + +MISGYV N +++ AL+++ + + + TFS + AC+ L +++ G+ L
Sbjct: 276 FDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGREL 335
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H +++K E VG+++++MY++CG ++ A F IS + W +++ +S G
Sbjct: 336 HGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKP 395
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
EA+ LF M + + + T LSAC ++ G +I M L + +
Sbjct: 396 EEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSAL 455
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+++ + G L+ A + ++ E + V W ++++A
Sbjct: 456 INMYAKCGKLNIA-RLVFNLMQEKNEVAWNSIIAA 489
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 231/538 (42%), Gaps = 68/538 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T + QL AR LFD MP +V WN M+ GY + D++ L + M + +K
Sbjct: 150 NTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIK 209
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ TF++ L A+ +SL K+IH +++ G ++ S L+ Y C + A ++
Sbjct: 210 PDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKM 269
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK- 200
F+ +S FD+ V++T +ISGY ++G K
Sbjct: 270 FN----------------------LSTKFDI---------VIYTAMISGYV--LNGMNKD 296
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL++FRW+ + + +PN TF S++ ACA L A G+ +HG +IK E +G A++
Sbjct: 297 ALEIFRWLLQK-KMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIM 355
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---------- 310
Y C D A ++ R+ NS+I G+ E+A +F ++
Sbjct: 356 NMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCV 415
Query: 311 ---------TEANSISYNSMIKGYAVYGQVD----DSKRLFEKMPHRSIISLNTMISVIP 357
++ Y I G+ + G + D L +++ ++ +
Sbjct: 416 TVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLM 475
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
+ E+N V WNS+I+ Y + +L L+ M + I TF + +C G ++ G
Sbjct: 476 Q-EKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDG 534
Query: 418 QLLHAHLVK---TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA-WTALMNG 473
+ + P + Y + D++ R G +++A +S+ P A+ W L+
Sbjct: 535 VRYFRCMTEEYGIPAQMEHY--ACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGA 592
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVP-NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
HG A + +L D+ P N+ ++ + AG KI MK GV
Sbjct: 593 CRVHGNVELAEVASRYLL--DLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGV 648
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 188/403 (46%), Gaps = 65/403 (16%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P++YTF VI+ C L GKV+ ++++ GF+ D + +LI+ Y + A R
Sbjct: 8 PDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRF 67
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISY------------- 318
+D++ + N +ING + G + A +F + + +S+++
Sbjct: 68 FDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMV 127
Query: 319 ----------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
N+++ Y+ Q+ D+++LF+ MP +
Sbjct: 128 EYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDL---------- 177
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
V WN MI GYVQN + A L+ M I TF+ + + SL+Q
Sbjct: 178 -------VVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQ 230
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
+ +H ++V+ +VY+ ++L+D+Y +C A F+ + ++ +TA+++GY
Sbjct: 231 IKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVL 290
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
+G+ +A+ +F +L++ ++PNA TF +L AC AGL +K+ R + Y + LE
Sbjct: 291 NGMNKDALEIFRWLLQKKMIPNALTFSSILPAC--AGLA--AIKLGRELHGYIIKNELEE 346
Query: 537 Y----TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ ++++ + G L A + I+ DA+ W +++++
Sbjct: 347 KCPVGSAIMNMYAKCGRLDLAHLIFGRISIK-DAICWNSIITS 388
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 197/631 (31%), Positives = 318/631 (50%), Gaps = 60/631 (9%)
Query: 48 TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIH 107
T WNT++ GYS A L + + M R V+ ++ TF +L CA + G+++H
Sbjct: 6 TAFLWNTLIRGYS-IAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVH 64
Query: 108 CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
V+K G+E FVG+ LL FY NC + +A R
Sbjct: 65 GSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGR--------------------------- 97
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDG--CEKALKLFRWMRESGENMPNEYTFDSVI 225
VF +MP+KD+V W +I + SV+G AL +FR M + G PN T S +
Sbjct: 98 ----VFDEMPEKDLVSWNTMIGVF--SVNGWHYRDALDMFRLMIDEGLK-PNSITISSFL 150
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
L F G+ VHG I+ G E D I +LI+ Y A V+ +L+ +
Sbjct: 151 PVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVV 210
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTE-----ANSISYNSMIKGYAVYGQVDDSKRLFEK 340
+ N++I + R E + R + NS+++ +++ A G V K + +
Sbjct: 211 SWNAMIANF-AQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHAR 269
Query: 341 MPHRSII-------SLNTMIS----------VIPEMERNPVTWNSMISGYVQNNLHEKAL 383
H +L M + V R+ V++N +I G+ Q + ++L
Sbjct: 270 SIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLRDEVSYNILIVGHSQTSDCSESL 329
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
L+ M+ + + + +F AC+ L +++QG+ +H L++ F +++V SL+D Y
Sbjct: 330 SLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFY 389
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++CG I A+ F +++ +VA+W ++ GY G A+ LFE M + D+ ++ +F+
Sbjct: 390 TKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFI 449
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
VLSAC GL+ +G K F +K+ G+ PT HY C+VDLLGR+G + EA E IK +PI
Sbjct: 450 AVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIV 509
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
DA +WGALL AC + N+E+ AA+ +F L + Y +LSN+YA G+W + IR
Sbjct: 510 PDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIR 569
Query: 624 KRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
+ + VKK PGCSW+++ + HAF V ++
Sbjct: 570 ELMKSRGVKKSPGCSWVQIGEQAHAFVVGEK 600
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 132/543 (24%), Positives = 224/543 (41%), Gaps = 65/543 (11%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS--KWAKFDESLSLV 72
E+ + N ++ G G L A +FD+MP + +VSWNTM+ +S W + ++L +
Sbjct: 73 ESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGW-HYRDALDMF 131
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M +K N T S+ L V +L G+++H ++ G E F+ + L+ YA
Sbjct: 132 RLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKS 191
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
EA VF +L N + W+ M+ + Q + F++
Sbjct: 192 GHSTEASNVFYKLDAKNVVSWNAMIANFAQ-----NRFELV------------------- 227
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
A+ L R M++ GE +PN TF +V+ ACAR+G GK +H I G FD
Sbjct: 228 --------AVGLVRQMQDYGE-LPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFD 278
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYD-RLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
+ AL + Y A V+D L + + N LI G ++ +F+ +
Sbjct: 279 LFVSNALTDMYAKSGHLKLARNVFDTSLRDEV--SYNILIVGHSQTSDCSESLSLFSEMQ 336
Query: 312 ----EANSISYNSMIKGYAVYGQVDDSKR----LFEKMPHRSIISLNTMISVIPEMER-- 361
+ +++S+ + A + K L K+ H + N+++ + R
Sbjct: 337 LMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIG 396
Query: 362 ------------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
+ +WN+MI GY + A+ L+ MRK ++ +F + ACS
Sbjct: 397 LARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACS 456
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWT 468
G L++G+ L E +VD+ R G + +A + P+ W
Sbjct: 457 HGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWG 516
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC-VRAGLVNEGMKIFRSMKS 527
AL+ +G A E + E + P + + +LS G +E +I MKS
Sbjct: 517 ALLGACRIYGNLELAAWAAEHLFE--LKPEHSGYYTLLSNMYAETGRWDEANRIRELMKS 574
Query: 528 YGV 530
GV
Sbjct: 575 RGV 577
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 200/451 (44%), Gaps = 57/451 (12%)
Query: 8 SQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD- 66
S M E+ I N I ++G A N+F ++ + VVSWN M+ +++ +F+
Sbjct: 168 SSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQ-NRFEL 226
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
++ LV M N TF+ +L CA++ + GK+IH + G FV + L
Sbjct: 227 VAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALT 286
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
YA ++ A+ VFD D E+ +++++VG+ Q SD
Sbjct: 287 DMYAKSGHLKLARNVFDTSLRD-EVSYNILIVGHSQT---SD------------------ 324
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
C ++L LF M+ G N +F + ACA L A +GK +HG L++
Sbjct: 325 -----------CSESLSLFSEMQLMGLKQDN-VSFMGALSACANLTAIKQGKEIHGFLLR 372
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
F + +L++FY C A ++DR+ N + + N++I G +G ++ A +
Sbjct: 373 KLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDL 432
Query: 307 FNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
F + E +S+S+ +++ + G ++ ++ F+++ R I E
Sbjct: 433 FENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGI-------------EPT 479
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
+ + M+ + L E+A +L ++ L I + + L AC G+L+
Sbjct: 480 QMHYACMVDLLGRAGLMEEAAEL---IKGLPIVPDANIWGALLGACRIYGNLELAAWAAE 536
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
HL + E + Y T L +MY+ G ++A
Sbjct: 537 HLFELKPEHSGYY-TLLSNMYAETGRWDEAN 566
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 188/640 (29%), Positives = 319/640 (49%), Gaps = 85/640 (13%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV-KLNETTFSTILSVCAQLN 98
+F Q+P N +L S+ + ++++ L + N L+ +F ++L ++++
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 99 SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLV 158
+ G +IH L K G+ F+ +GL+ YA+C I +A+ +FD++ + + W++++
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195
Query: 159 GYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
GY Q D AL+LF MR S + P+
Sbjct: 196 GYCQNGHYDD--------------------------------ALRLFEDMR-SSDMKPDS 222
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
+V+ AC G G+ +H + G+ D + ALI Y C A D A ++YD
Sbjct: 223 VILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDG 282
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLF 338
L + L S ++++G +G ++DA IF+++ E + + +++MI GYA Q ++ +LF
Sbjct: 283 LSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLF 342
Query: 339 EKM-PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
++M RS+ TM+SVI
Sbjct: 343 DEMLQKRSVPDQITMLSVIS---------------------------------------- 362
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
ACS +G+L Q +H ++ ++ F + V +L+DMY++CG++ A+ F
Sbjct: 363 ---------ACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFE 413
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
++ NV +W++++N ++ HG A+ LF M E +I PN TF+GVL AC AGLV E
Sbjct: 414 NMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEE 473
Query: 518 GMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
G K+F SM +G+ PT EHY C+VDL R+ L +A E I+ MP + ++WG+L+SAC
Sbjct: 474 GEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSAC 533
Query: 577 WFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPG 636
E+GE AA+++ L+ A V+LSNIYA +W IRK +++ + K+
Sbjct: 534 QVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKA 593
Query: 637 CSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
S IE+N++VH F + DR + + IY L+ + + L V
Sbjct: 594 SSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLV 633
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 188/361 (52%), Gaps = 18/361 (4%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
+++ AR LFD+M V+WN ++ GY + +D++L L M S++K + T+LS
Sbjct: 171 RIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLS 230
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
C +L G+ IH V +GY + + L+ YANC ++ A++++D L + ++
Sbjct: 231 ACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIV 290
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
+ ML GY + ++ DA +F +M ++D+V W+ +ISGYA+S D ++ALKLF M +
Sbjct: 291 STAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAES-DQPQEALKLFDEMLQK- 348
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
++P++ T SVI AC+ +GA + +H + + GF S+ ALI+ Y C A
Sbjct: 349 RSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKA 408
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVY 328
V++ + + + +S+IN G + A +F R+ E N +++ ++
Sbjct: 409 REVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHA 468
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G V++ ++LF M + IS P E + M+ Y + N KA++L T
Sbjct: 469 GLVEEGEKLFSSMINEHGIS--------PTREH----YGCMVDLYCRANFLRKAIELIET 516
Query: 389 M 389
M
Sbjct: 517 M 517
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 36/303 (11%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
++ + LIVST ++ + G + AR +FDQM R +V W+ M+ GY++ + E+L L
Sbjct: 283 LSSKHLIVST-AMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKL 341
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M + ++ T +++S C+ + +L IH V +SG+ V + L+ YA
Sbjct: 342 FDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAK 401
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C + +A+ VF+ MP+K+V+ W+ +I+ +
Sbjct: 402 CGNLVKAREVFE-------------------------------NMPRKNVISWSSMINAF 430
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFE 250
A + + A+KLFR M+E PN TF V+ AC G EG K+ ++ + G
Sbjct: 431 AMHGNA-DSAIKLFRRMKEVNIE-PNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGIS 488
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNR 309
G +++ YC A+ + + + P + SL++ G E E R
Sbjct: 489 PTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKR 548
Query: 310 LTE 312
L E
Sbjct: 549 LLE 551
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 208/686 (30%), Positives = 335/686 (48%), Gaps = 75/686 (10%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I G+ G + A +F MP+R +VSWN+++ G+S+ + ++ M
Sbjct: 70 NALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEG 129
Query: 82 L--NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
L + T T+L VCA+ + G +IH L +K G V + L+ Y+ C + EA+
Sbjct: 130 LLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQ 189
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+FD K +K+ V W +I G C
Sbjct: 190 MLFD-------------------------------KNNRKNAVSWNTMIGGL------CT 212
Query: 200 K-----ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
K A LFR M+ + NE T +++ AC + K +HG I+ GF++DE
Sbjct: 213 KGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDEL 272
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+ + Y C A RV+ +E +N+ N+LI G G A ++ ++T +
Sbjct: 273 VANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSG 332
Query: 315 --------------SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL--------NTM 352
S S+ G V+G V + S++SL +
Sbjct: 333 LVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSAR 392
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR----STFSVLFHAC 408
+ E++ V+WN+MISGY QN L E AL L+ RKL D + + SVL AC
Sbjct: 393 LLFDGMEEKSSVSWNAMISGYSQNGLPEDALILF---RKLVSDGFQPSDIAVVSVL-GAC 448
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
S +L+ G+ H + +K +V+V S +DMY++ G I ++++ F + + ++A+W
Sbjct: 449 SQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWN 508
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
A++ Y HG G E++ LFE M + +P+ TF+G+L+ C AGLV EG+K F M+++
Sbjct: 509 AIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNF 568
Query: 529 -GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
G+ P LEHY CV+D+LGR+G L +A + +MP + D+ VW +LLS C + +E+G+
Sbjct: 569 HGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQI 628
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVH 647
A+K+ L+ K + YV LSN+YA G+W +R+ + + ++KD GCSWIEL +VH
Sbjct: 629 VAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVH 688
Query: 648 AFSVEDRNNPNCNVIYATLEHLTANL 673
+F D P + T L +
Sbjct: 689 SFVAGDNLLPQSKEMSMTWRKLEKKM 714
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/517 (23%), Positives = 222/517 (42%), Gaps = 63/517 (12%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TF ++ C G+ IH +V+K G FVG+ L+ Y ++ A +VF +
Sbjct: 33 TFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYM 92
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
N + W+ ++ G+ + D FD+ ++M ++G E+ L
Sbjct: 93 PVRNLVSWNSIISGFSENGFSKDCFDMLVEM-----------MAG--------EEGL--- 130
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
+P+ T +V+ CAR G +HGL +K G D + +L++ Y
Sbjct: 131 ---------LPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSK 181
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-----EANSISYNS 320
C A ++D+ + N++I GL + G I +A +F + E N ++ +
Sbjct: 182 CGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLN 241
Query: 321 MIKGYAVYGQVDDSKRL----------FEKMPHRSIIS-------LNTMISVIPEMERNP 363
++ Q+ K L ++++ ++ L V ME
Sbjct: 242 ILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKT 301
Query: 364 V-TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
V +WN++I G QN KAL LY+ M + T L A + L SL+ G+ +H
Sbjct: 302 VNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHG 361
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+++ E + ++G SL+ +Y CG + A+ F + + +W A+++GYS +GL +
Sbjct: 362 FVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPED 421
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV-- 540
A++LF ++ P+ V VL AC + +++ + Y + L V
Sbjct: 422 ALILFRKLVSDGFQPSDIAVVSVLGACSQ----QSALRLGKETHCYALKALLMEDVFVAC 477
Query: 541 --VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+D+ +SG + E+ + + D W A+++A
Sbjct: 478 STIDMYAKSGCIKESRSVFDGLKNK-DLASWNAIIAA 513
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 147/341 (43%), Gaps = 41/341 (12%)
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
A+ +F + E + +TF VI+AC G+V+HG++IK G D +G ALI
Sbjct: 14 AIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALI 73
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS----- 315
Y D A++V+ + L + NS+I+G G +D F+ L E +
Sbjct: 74 AMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDC---FDMLVEMMAGEEGL 130
Query: 316 -------------------ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+ I G AV + + R+ + S++ + + +
Sbjct: 131 LPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRV-----NNSLVDMYSKCGYL 185
Query: 357 PEME--------RNPVTWNSMISGYVQNNLHEKALQLYMTMR-KLAIDRTRSTFSVLFHA 407
E + +N V+WN+MI G +A L+ M+ + I+ T + A
Sbjct: 186 TEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPA 245
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C + L+ + LH + ++ F+ + V V Y++CG + A+ F S+ + V +W
Sbjct: 246 CLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSW 305
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
AL+ G + +G +A+ L+ M +VP+ T +L A
Sbjct: 306 NALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLA 346
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 375 QNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQG--QLLHAHLVKTPFES 431
+N L+ A+ +++ + + TF + AC+ GSL +G +++H ++K
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACT--GSLDRGLGEVIHGMVIKMGLLL 64
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV-LLFEIM 490
+V+VG +L+ MY + G ++ A F + N+ +W ++++G+S +G + +L E+M
Sbjct: 65 DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMM 124
Query: 491 L-EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
E+ ++P+ AT V VL C R V G++I G+ + +VD+ + G+
Sbjct: 125 AGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGY 184
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSA 575
L EA + + D +AV W ++
Sbjct: 185 LTEA-QMLFDKNNRKNAVSWNTMIGG 209
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 308/611 (50%), Gaps = 84/611 (13%)
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
+ + +L C Q SL + K+IH LK+ V L Y +C ++ A+R+FD
Sbjct: 8 KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA--KSVDGCEKA 201
E+ P V++W ++I YA DG A
Sbjct: 68 EI-------------------------------PNPSVILWNQIIRAYAWNGPFDG---A 93
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+ L+ M G PN+YT+ V++AC+ L A +G +H G E D + AL++
Sbjct: 94 IDLYHSMLHLGVR-PNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
FY C G + +A+ +F+ ++ + +++N+M
Sbjct: 153 FYAKC-------------------------------GILVEAQRLFSSMSHRDVVAWNAM 181
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSII-SLNTMISVIPEME--------------RNPVTW 366
I G ++YG DD+ +L +M I + +T++ V+P + RN V+W
Sbjct: 182 IAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSW 241
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
++MI GYV ++ ++AL ++ M+ ID +T + ACS L +LQ G H +L+
Sbjct: 242 SAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIV 301
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
F ++ + +L+DMYS+CG I+ A+ F+ + ++ +W A++ GY HGLG EA+ L
Sbjct: 302 RGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGL 361
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLG 545
F +L + P+ TF+ +LS+C +GLV EG F +M + + +VP +EH C+VD+LG
Sbjct: 362 FHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILG 421
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G + EA FI++MP E D +W ALLSAC N+E+GE ++K+ L + +V+
Sbjct: 422 RAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVL 481
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
LSNIY+ G+W IR +KK PGCSWIE+N VHAF D+++ + I
Sbjct: 482 LSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRK 541
Query: 666 LEHLTANLNSV 676
LE L + +
Sbjct: 542 LEELLVEMKRL 552
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 195/479 (40%), Gaps = 115/479 (24%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
Q+V AR LFD++P +V+ WN ++ Y+ FD ++ L +M V+ N+ T+ +L
Sbjct: 58 QVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLK 117
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
C+ L ++ DG +IH G E FV + L+ FYA C + EA+R+F + + +
Sbjct: 118 ACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA 177
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDV------------------------------- 181
W+ M+ G L DA + ++M ++ +
Sbjct: 178 WNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRN 237
Query: 182 -VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
V W+ +I GY S D ++AL +FR M+ SG + P+ T V+ AC+ L A G
Sbjct: 238 EVSWSAMIGGYVAS-DCMKEALDIFRMMQLSGID-PDLTTMLGVLPACSHLAALQHGFCS 295
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
HG LI GF D I ALI+ Y C G+I
Sbjct: 296 HGYLIVRGFATDTLICNALIDMYSKC-------------------------------GKI 324
Query: 301 EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
A +FNR+ + +S+N+MI GY ++G
Sbjct: 325 SFAREVFNRMDRHDIVSWNAMIIGYGIHG------------------------------- 353
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
L +AL L+ + L + TF L +CS G + +G+L
Sbjct: 354 -----------------LGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLW 396
Query: 421 HAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
+ + + +VD+ R G I++A ++ P+V W+AL++ H
Sbjct: 397 FDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 455
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+TLI N I + G++ AR +F++M +VSWN M+ GY E+L L
Sbjct: 307 DTLI--CNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHD 364
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
+ +K ++ TF +LS C+ +++G+
Sbjct: 365 LLALGLKPDDITFICLLSSCSHSGLVMEGR 394
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 276/506 (54%), Gaps = 26/506 (5%)
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCE---KALKLFRWMRESGENMPNEYTFDSVIRACA 229
F +M +V V+ +I G+ C +AL+ + M E +P YTF S+++AC
Sbjct: 94 FTQMENPNVFVYNAMIKGFVY----CGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACT 149
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
+ A G++VH + K GFE + AL++FY E A +V+D + A +
Sbjct: 150 FMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTA 209
Query: 290 LINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
+++ L +G ++ A +F + E N+ ++N+MI GY G V+ ++ LF +MP + IIS
Sbjct: 210 MLSALARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIIS- 268
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
W +MI+ Y QN ++ AL +Y MR I T S + AC+
Sbjct: 269 ----------------WTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACA 312
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+G+L+ G+ +H +++ +VY+G++LVDMY++CGS++ + F ++ N+ W A
Sbjct: 313 HIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNA 372
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSY 528
++ G + HG +A+ +F IM + I+PN TF+ +LSAC AGLV+EG F SM + Y
Sbjct: 373 VIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDY 432
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
+ P + HY C+VD+L +SG+L+EA E IK M E ++++WGALL+ C N E+ E A
Sbjct: 433 DIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDA 492
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV-KKDPGCSWIELNSRVH 647
+++ L+ Y +L ++YA W + IR + V KK PG SWIEL +H
Sbjct: 493 VEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIH 552
Query: 648 AFSVEDRNNPNCNVIYATLEHLTANL 673
FS ++P+ + IY L L L
Sbjct: 553 QFSASADSHPDSDKIYFILTELDGQL 578
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 171/391 (43%), Gaps = 64/391 (16%)
Query: 41 FDQMPIRTVVSWNTML-----CGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
F QM V +N M+ CGY F V + SNV TFS+++ C
Sbjct: 94 FTQMENPNVFVYNAMIKGFVYCGY----PFRALQCYVHMLEESNVLPTSYTFSSLVKACT 149
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+ ++ G+ +HC + K G+E FV + L+ FY+ + EA++VFDE+ E + W+
Sbjct: 150 FMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTA 209
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK--SVDGCE-------------- 199
ML + M A +F +MP+++ W +I GY + +V+ E
Sbjct: 210 MLSALARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISW 269
Query: 200 --------------KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
AL ++ MR +G +P+E T +V ACA +GA GK +H ++
Sbjct: 270 TTMITCYSQNKQYQDALAIYSEMRLNG-IIPDEVTMSTVASACAHIGALELGKEIHHYVM 328
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
G D IG AL++ Y C + D ++ ++ +L + L N++I GL G E A
Sbjct: 329 SQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALR 388
Query: 306 IFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS------------- 348
+F + N +++ S++ G VD+ + F M I
Sbjct: 389 MFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDML 448
Query: 349 -----LNTMISVIPEMERNP--VTWNSMISG 372
LN + +I ME P + W ++++G
Sbjct: 449 SKSGYLNEALELIKSMEFEPNSIIWGALLNG 479
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 143/322 (44%), Gaps = 66/322 (20%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I R G + +A LF+QMP + ++SW TM+ YS+ ++ ++L++ S M + +
Sbjct: 239 NTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGII 298
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+E T ST+ S CA + +L GK+IH V+ G ++GS L+ YA C
Sbjct: 299 PDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKC--------- 349
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEK 200
G + +L+ +F K+ K++ W +I G A V G EK
Sbjct: 350 -----------------GSLDLSLL-----IFFKLTDKNLYCWNAVIEGLA--VHGYAEK 385
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL++F M E + MPN TF S++ AC G EG+
Sbjct: 386 ALRMFAIM-EREKIMPNGVTFISILSACTHAGLVDEGR---------------------- 422
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEANSISYN 319
F R YD P + +++ L G + +A ELI + E NSI +
Sbjct: 423 ------SRFLSMTRDYDI--RPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWG 474
Query: 320 SMIKGYAVYGQVDDSKRLFEKM 341
+++ G ++G + ++ E++
Sbjct: 475 ALLNGCKLHGNCEIAEDAVEQL 496
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 126/304 (41%), Gaps = 60/304 (19%)
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
+ I+ ++ + F ++ N YN+MIKG+ G P R
Sbjct: 75 HQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYCG-----------YPFR--- 120
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFH 406
ALQ Y+ M + + + T TFS L
Sbjct: 121 ----------------------------------ALQCYVHMLEESNVLPTSYTFSSLVK 146
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
AC+ + +++ GQ++H H+ K FES+++V T+LVD YS+ +++A+ F + + A
Sbjct: 147 ACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFA 206
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
WTA+++ + G A LFE M E+ N AT+ ++ R G V +F M
Sbjct: 207 WTAMLSALARVGDMDSARKLFEEMPER----NTATWNTMIDGYTRLGNVESAELLFNQMP 262
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE---LDAVVWGALLSACWFWMNME 583
+ ++ +T ++ ++ +A +M + D V + SAC +E
Sbjct: 263 TKDIIS----WTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALE 318
Query: 584 VGER 587
+G+
Sbjct: 319 LGKE 322
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 5/186 (2%)
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CS + L L A ++KT + ++ + S++ +F+ + +PNV +
Sbjct: 49 CSTINELHG---LCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVY 105
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
A++ G+ + G A+ + MLE+ +++P + TF ++ AC V G + +
Sbjct: 106 NAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIW 165
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
G L T +VD + L EA + +M E DA W A+LSA +M+
Sbjct: 166 KKGFESHLFVQTALVDFYSKLEILSEARKVFDEM-CERDAFAWTAMLSALARVGDMDSAR 224
Query: 587 RAAQKM 592
+ ++M
Sbjct: 225 KLFEEM 230
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 80/190 (42%), Gaps = 8/190 (4%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
+ G L + +F ++ + + WN ++ G + +++L + + M R + N TF
Sbjct: 347 AKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFI 406
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYEC---FEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+ILS C L+D + L + Y+ G + + + E + +
Sbjct: 407 SILSACTHAG-LVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSME 465
Query: 146 HEDNELLWSLMLVG---YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
E N ++W +L G + C + DA + + + + + L+S YA+ D E A
Sbjct: 466 FEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVA- 524
Query: 203 KLFRWMRESG 212
+ M+E G
Sbjct: 525 HIRSMMKEKG 534
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 202/672 (30%), Positives = 330/672 (49%), Gaps = 90/672 (13%)
Query: 53 NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
N+++ GYS E++ L M V N TF +LS C ++ + +G Q+H V+K
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVK 159
Query: 113 SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
G E F+ + L+ FYA C ++ +VF+ + E N + W+ ++ GY + +
Sbjct: 160 MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGD-------- 211
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
PK +A+ LF M E+G P+ T VI ACA+L
Sbjct: 212 ---RPK---------------------EAVSLFFEMVEAGIR-PSSVTMVCVISACAKLR 246
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
G+ V + + G + ++ + AL++ Y C A D A R++D + L N++++
Sbjct: 247 DLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILS 306
Query: 293 GLISMGRIEDAELIF----------NRLTEANSIS---------YNSMIKGYAVY----- 328
G +A I +R+T ++IS Y + GY +
Sbjct: 307 NYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEG 366
Query: 329 ---------------GQVDDSKRLFEKMPHRSIISLNTMIS----------------VIP 357
G+ + + R+F+ M +++++S N++ + IP
Sbjct: 367 WDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIP 426
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
ERN V WN+MISG VQ +L E A++L+ M+ I R T + AC LG+ +
Sbjct: 427 --ERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELA 484
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+ +H ++ K ++ + T+LVDM++RCG A F+ ++ +V+AWTA + +
Sbjct: 485 KWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAME 544
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
G G A LF ML Q + P+ FV VL+AC G V +G+ IF M+ +G+ P +EHY
Sbjct: 545 GNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHY 604
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
C+VDLLGR+G L EA + IK MP+E + VVWG+LL+AC N+E+ AA+++ L
Sbjct: 605 GCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAP 664
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+ +V+LSNIYA GKW +R L V+K PG S +++N +H F+ D ++P
Sbjct: 665 QRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHP 724
Query: 658 NCNVIYATLEHL 669
I L+ +
Sbjct: 725 EMTHIALMLQEM 736
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 173/364 (47%), Gaps = 25/364 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A+ LFD+ R +V +NT+L Y++ E+L+++ M + + + T + +
Sbjct: 281 GAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAI 340
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S AQL L GK H V+++G E ++ +G+ ++ Y C + E A RVFD + +
Sbjct: 341 SASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVV 400
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ + G+++ + A++VF ++P+++ V W +ISG + E A++LFR M+
Sbjct: 401 SWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQK-SLFEDAIELFREMQGE 459
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G + T + AC LGA K VH + K G D + AL++ + C
Sbjct: 460 GIK-ADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQS 518
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAV 327
AM+V++++ ++A + I + G E A +FN++ + + + + ++ +
Sbjct: 519 AMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSH 578
Query: 328 YGQVDDSKRLFEKMPHRSI----------ISLNTMISVIPE---------MERNPVTWNS 368
GQV+ +F M I + L ++ E ME N V W S
Sbjct: 579 GGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGS 638
Query: 369 MISG 372
+++
Sbjct: 639 LLAA 642
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 140/341 (41%), Gaps = 72/341 (21%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS 70
LM+ +T +VS N RNG + +A +F+Q+P R V WNTM+ G + + F++++
Sbjct: 393 LMSNKT-VVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIE 451
Query: 71 LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
L M +K + T I S C L + K +H + K+G C + + L+ +A
Sbjct: 452 LFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFA 511
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
C + + A +VF+ KM ++DV WT I
Sbjct: 512 RCGDPQSAMQVFN-------------------------------KMTERDVSAWTAAIGT 540
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
A +G E A LF M G P+ F V+ AC+ G+V GL I F
Sbjct: 541 MAMEGNG-EGATGLFNQMLIQGVK-PDVVLFVQVLTACSH-----GGQVEQGLHI---FS 590
Query: 251 FDESIG-GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFN 308
E G IE Y GC +++ L G + +A +LI +
Sbjct: 591 LMEDHGISPQIEHY-GC-----------------------MVDLLGRAGLLREAFDLIKS 626
Query: 309 RLTEANSISYNSMIKGYAVYGQVD----DSKRLFEKMPHRS 345
E N + + S++ V+ V+ ++R+ E P R+
Sbjct: 627 MPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRA 667
>gi|357118286|ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 202/693 (29%), Positives = 342/693 (49%), Gaps = 93/693 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+ L+ N+++ R G+L AR LFD +P R+VV+WN+ L ++ + + ++
Sbjct: 27 DELVRQHNRSLVALLRRGRLAAARRLFDALPARSVVTWNSFLAALARGRDVAAARAFFAS 86
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M + +++T+L+ ++ SL N
Sbjct: 87 MPVRDA----VSWNTLLAAYSR--SL------------------------------NSEH 110
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+ A+R+FDE+ + + + W+ +L YV+ LM +A +F +MP+++V W +++G+ S
Sbjct: 111 LAAARRLFDEMPQRDAVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMVTGFF-S 169
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG------ 248
KAL +F + MP ++ A LG G + +G L +
Sbjct: 170 AGQVNKALDMF-------DAMP--------VKDSASLGTLVSGFIKNGRLHEAEELLTKR 214
Query: 249 ---FEFDESIGG--ALIEFYCGCEAFDGAMRVYD---RLENPCLNAS-----------NS 289
+ DE++ LI Y A R++D R + C + NS
Sbjct: 215 LRVTDMDEAVDAYNTLIAAYGQVGRVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNS 274
Query: 290 LINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
++ I G + A IFN + + + +S+N+MI GY ++++++LF +MP I+S
Sbjct: 275 MMTCYIRTGDVCSAREIFNEMPDKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPDPDIVSW 334
Query: 350 NTMISVIPEM--------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
N +I + ER ++WN+MISGY QN ++ A++L+ M +
Sbjct: 335 NLIIRGFTQKGDVEHARGFFDRMPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGT 394
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
R TFS + AC+ L L+ G LH L++ F + +L+ MYSR G++ DA+A
Sbjct: 395 PDRHTFSSVLAACASLPMLRLGAQLH-QLIEKSFLPDTATSNALMTMYSRGGALTDAEAI 453
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F + ++ +W AL+ GY HHG +EA+ LFE M ++P TF+ +LSAC AGLV
Sbjct: 454 FKQMPQKDLVSWNALIGGYEHHGCATEALQLFEDMRSARVMPTHITFISLLSACGNAGLV 513
Query: 516 NEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+EG +F +M Y + +EHY +V+L+GR G L +A E I MPI D VWGA L
Sbjct: 514 SEGWMVFDTMIHEYSIAARIEHYAALVNLIGRHGQLDDALEVINSMPIAPDRSVWGAFLG 573
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
AC N + AA+ + +D + + YV++ N++A G+WG +R+ + + K
Sbjct: 574 ACTAKKNELLAHMAAKALSKIDPESSAPYVLIHNLHAHEGRWGSASVVREEMEQQGIHKH 633
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
PG SWI+L+ +VH F D ++P I++ L+
Sbjct: 634 PGYSWIDLHDKVHVFISGDTSHPLTQEIFSVLK 666
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 195/664 (29%), Positives = 329/664 (49%), Gaps = 62/664 (9%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
++ A +F+ + R V WN M+ GY+ + + + L M S +++ TF+++LS
Sbjct: 377 KMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
CA + L G Q H +++K FVG+ L+ YA C +E
Sbjct: 437 TCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALE---------------- 480
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
DA +F M +D V W +I GY + + E A LF M G
Sbjct: 481 ---------------DARQIFEHMCDRDNVSWNTIIGGYVQDENESE-AFDLFMRMNSCG 524
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+ + S ++AC + +GK VH L +KCG + G +LI+ Y C + A
Sbjct: 525 -IVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDA 583
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK----- 323
+V+ + + + N+LI G S +E+A ++F + + I++ ++++
Sbjct: 584 RKVFSSMPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTKGVNPSEITFATIVEACHKP 642
Query: 324 ----------------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
G++ G+ L M R + + S + ++ V W
Sbjct: 643 ESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSS-PKSIVLWT 701
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
M+SG+ QN +E+AL+ Y MR ++TF + CS L SL++G+ +H+ +
Sbjct: 702 GMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHL 761
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISS-PNVAAWTALMNGYSHHGLGSEAVLL 486
+ + +L+DMY++CG + + F + NV +W +L+NGY+ +G +A+ +
Sbjct: 762 AHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKI 821
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLG 545
F+ M + I+P+ TF+GVL+AC AG V++G KIF M YG+ ++H C+VDLLG
Sbjct: 822 FDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLG 881
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R G+L EA++FI+ ++ DA +W +LL AC + GE AA+++ L+ + SAYV+
Sbjct: 882 RWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVL 941
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
LSNIYA G+W + +RK + VKK PG SWI++ R H F+ D+++ + I
Sbjct: 942 LSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQSHSDIGKIEMF 1001
Query: 666 LEHL 669
LE L
Sbjct: 1002 LEDL 1005
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 166/622 (26%), Positives = 276/622 (44%), Gaps = 102/622 (16%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
Q+ A F+ + + V +WN+ML YS + + L ++ + + N+ TFS +L
Sbjct: 109 AQVSYAEKQFNSLE-KDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVL 167
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S A+ ++ G+QIHC ++K G E + G L+ YA C + +A+RVFD + + N +
Sbjct: 168 STSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTV 227
Query: 152 LWSLMLVGYVQCNL-----------------------------------MSDAFDVFIKM 176
W+ + GYV+ L + DA +F +M
Sbjct: 228 CWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEM 287
Query: 177 PKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFC 235
P DVV W +ISG+ K GCE A++ F MR+S T SV+ A +
Sbjct: 288 PSPDVVAWNVMISGHGKR--GCEIVAIEYFLNMRKSSVK-STRSTLGSVLSAIGIVANLD 344
Query: 236 EGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI 295
G VVH IK G + +G +L+ Y CE + A +V++ LE N++I G
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYA 404
Query: 296 SMGRIEDA---------------ELIFNRLTEANSISY---------------------- 318
G + F L ++S+
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLF 464
Query: 319 --NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
N+++ YA G ++D++++FE M +R+ V+WN++I GYVQ+
Sbjct: 465 VGNALVDMYAKCGALEDARQIFEHM-----------------CDRDNVSWNTIIGGYVQD 507
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
+A L+M M I + + AC+ + L QG+ +H VK + ++ G
Sbjct: 508 ENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTG 567
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+SL+DMYS+CG I DA+ FSS+ +V + AL+ GYS + L EAV+LF+ ML + +
Sbjct: 568 SSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKGVN 626
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG---RSGHLHEA 553
P+ TF ++ AC + + G + + +G E+ + LLG S + EA
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLG--ISLLGLYMNSRRMAEA 684
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
++ V+W ++S
Sbjct: 685 CALFSELSSPKSIVLWTGMMSG 706
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 215/477 (45%), Gaps = 56/477 (11%)
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
GK +H L G + +G+ ++ YA C ++ A++ F+ L
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL----------------- 121
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
+KDV W ++S Y+ S+ K L+ F + E+ PN++TF
Sbjct: 122 ---------------EKDVTAWNSMLSMYS-SIGQPGKVLRSFVSLFEN-LIFPNKFTFS 164
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
V+ AR G+ +H +IK G E + GGAL++ Y C+ A RV+D + +P
Sbjct: 165 IVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDP 224
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLF 338
L +G + G E+A ++F R+ + +++ ++I Y G++ D++ LF
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLF 284
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
+MP + V WN MISG+ + A++ ++ MRK ++ TR
Sbjct: 285 GEMPSPDV-----------------VAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTR 327
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
ST + A + +L G ++HA +K SN+YVG+SLV MYS+C + A F +
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ N W A++ GY+H+G + + LF M + TF +LS C + + G
Sbjct: 388 LEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMG 447
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + + L +VD+ + G L +A + + M + D V W ++
Sbjct: 448 SQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHM-CDRDNVSWNTIIGG 503
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 135/546 (24%), Positives = 235/546 (43%), Gaps = 96/546 (17%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +F+ M R VSWNT++ GY + E+ L M+ + + ++ L
Sbjct: 477 GALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTL 536
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C ++ L GKQ+HCL +K G + GS L+ Y+ C IE+A++VF
Sbjct: 537 KACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFS-------- 588
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
MP+ VV LI+GY++ + E+A+ LF+ M
Sbjct: 589 -----------------------SMPEWSVVSMNALIAGYSQ--NNLEEAVVLFQEMLTK 623
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD-ESIGGALIEFYCGCEAFD 270
G N P+E TF +++ AC + + G HG +IK GF + E +G +L+ Y
Sbjct: 624 GVN-PSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMA 682
Query: 271 GAMRVYDRLENP-CLNASNSLINGLISMGRIEDA-------------------------- 303
A ++ L +P + +++G G E+A
Sbjct: 683 EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVC 742
Query: 304 -------------ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
LIF+ + + ++ N++I YA G + S ++F++M RS
Sbjct: 743 SVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRS----- 797
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
N V+WNS+I+GY +N E AL+++ +MR+ I TF + ACS
Sbjct: 798 -----------NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSH 846
Query: 411 LGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWT 468
G + G+ + ++ + E+ V +VD+ R G + +A + + P+ W+
Sbjct: 847 AGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWS 906
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
+L+ HG + E ++E + N++ +V + + G E + ++M+
Sbjct: 907 SLLGACRIHGDDMRGEIAAERLIELE-PQNSSAYVLLSNIYASQGRWEEANALRKAMRDR 965
Query: 529 GV--VP 532
GV VP
Sbjct: 966 GVKKVP 971
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 135/290 (46%), Gaps = 42/290 (14%)
Query: 334 SKRLFEKMPHRSIISL----------------------NTMISVIPE------------- 358
S+++F++MPHR ++L N ++ + +
Sbjct: 61 SRKVFDEMPHRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNS 120
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+E++ WNSM+S Y K L+ ++++ + I + TFS++ + +++ G+
Sbjct: 121 LEKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGR 180
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H ++K E N Y G +LVDMY++C + DAQ F I PN WT L +GY G
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAG 240
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
L EAV++FE M + P+ FV V++ + G + + +F M S P + +
Sbjct: 241 LPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS----PDVVAWN 296
Query: 539 CVVDLLGRSGHLHEAEEFIKDM---PIELDAVVWGALLSACWFWMNMEVG 585
++ G+ G A E+ +M ++ G++LSA N+++G
Sbjct: 297 VMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 13/245 (5%)
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
+ +H+ L++ + KL ++R F + H + +L+ G+ +H+ + +S
Sbjct: 41 HDQIHQGLLEICLEQCKLF--KSRKVFDEMPHRLAL--ALRIGKAVHSKSLILGIDSEGR 96
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+G ++VD+Y++C ++ A+ F+S+ +V AW ++++ YS G + + F + E
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENL 155
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
I PN TF VLS R V G +I SM G+ +VD+ + L +A+
Sbjct: 156 IFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQ 215
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA---QKMFGLDKKPIS-AYVILSNIY 610
+ D ++ + V W L S ++ + E A ++M G +P A+V + N Y
Sbjct: 216 R-VFDGIVDPNTVCWTCLFSG---YVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTY 271
Query: 611 AVLGK 615
LGK
Sbjct: 272 ISLGK 276
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 189/600 (31%), Positives = 308/600 (51%), Gaps = 73/600 (12%)
Query: 82 LNETTFSTILSVCAQ-----LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA--NCFE 134
+N T F++ S+ ++ D KQ+H ++K+ + LL F A + +
Sbjct: 1 MNSTIFTSTTSLWPPSSFFPCKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRD 60
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
++ A+++F +H N ++ ++ + N DA VFI+M
Sbjct: 61 LDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEM------------------ 102
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
V+ C PN +TF SV +AC R EG+ VHGL +K G + DE
Sbjct: 103 VEDCSVE--------------PNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDEF 148
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+ ++ Y C + A R++ R ++G I D + R + +
Sbjct: 149 VVSNVVRMYLSCGVMEDAHRLFYR---------RVFVDGCDG---IRDKK----RRVDGD 192
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
+ +N MI GY G+++ ++ LF++MP RS++S WN MI+GY
Sbjct: 193 VVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVS-----------------WNVMIAGYA 235
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
Q+ ++A++++ M+ + T + A S LG+L+ G+ +H + V+ +
Sbjct: 236 QSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDV 295
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+G++L+DMY++CGSI A F + NV W+ ++ G + HG + + FE M
Sbjct: 296 LGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAG 355
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
++P+ T++G+LSAC AGLVNEG F M + G+ P +EHY C+VDLLGR+G L E+
Sbjct: 356 VMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEES 415
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
EE I +MPI+ D V+W ALL AC N+E+G+R A+ + L +YV LSNIYA L
Sbjct: 416 EELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASL 475
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
G W +R + ++V+KDPGCSWIEL+ +H F VED ++P I++ L+ ++ NL
Sbjct: 476 GNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNL 535
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 226/468 (48%), Gaps = 40/468 (8%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+L+A +T ++ L + + + L AR +F M S+NT++ S+
Sbjct: 29 QLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALSE 88
Query: 62 W-AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
D L + + +V+ N TF ++ C + L +G+Q+H L +K G + EF
Sbjct: 89 SNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDEF 148
Query: 121 VGSGLLFFYANCFEIEEAKRVF---------DELHEDNE------LLWSLMLVGYVQCNL 165
V S ++ Y +C +E+A R+F D + + +LW++M+ GYV+
Sbjct: 149 VVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGE 208
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
+ A ++F +MP++ VV W +I+GYA+S ++A+++FR M + E PN T SV+
Sbjct: 209 LEVARNLFDEMPQRSVVSWNVMIAGYAQS-GHFKEAVEVFREM-QMAEVPPNYVTLVSVL 266
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
A +RLGA GK VH ++ D+ +G ALI+ Y C + + A++V++ L +
Sbjct: 267 PAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVV 326
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+++I GL GR +D F + A + ++Y ++ + G V++ + F+ M
Sbjct: 327 TWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHM 386
Query: 342 PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
S + P +E + M+ + L E++ +L + M I +
Sbjct: 387 VRVSGLE--------PRIEH----YGCMVDLLGRAGLLEESEELILNM---PIKPDDVIW 431
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGS 448
L AC G+++ G+ + HL++ P +S YV +L ++Y+ G+
Sbjct: 432 KALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYV--ALSNIYASLGN 477
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 280/534 (52%), Gaps = 44/534 (8%)
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
W I G+ S + +A+ L++ + + P+ YT+ + +ACARL G + G
Sbjct: 46 WNVAIRGFLDS-ENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 104
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG----- 298
++ GF+ D + A+I C DGA +++D+ L + NS+ING + G
Sbjct: 105 VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEA 164
Query: 299 ---------------------------RIEDAELIFNR--LTEANSISY-----NSMIKG 324
++ED +L E N + N+++
Sbjct: 165 LNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDM 224
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKAL 383
Y G ++ +++LF+ M +++++S TM+ EM +++ V WN+MI GYV N ++AL
Sbjct: 225 YMKCGNLESARKLFDSMTNKTMVSWTTML--FDEMPDKDVVPWNAMIGGYVHANRGKEAL 282
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
L+ M+ + I+ T ACS LG+L G +H ++ K NV +GT+L+DMY
Sbjct: 283 ALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMY 342
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++CG I A F + N WTA+++G + HG A+ F M++ ++P+ TF+
Sbjct: 343 AKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFL 402
Query: 504 GVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
G+LSAC GLV EG K F M S + + P L+HY+C+VDLLGR+G L EAEE IK MPI
Sbjct: 403 GLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPI 462
Query: 563 ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
E DAVVWGAL AC N+ +GERAA K+ +D YV+L+N+Y W +
Sbjct: 463 EADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKX 522
Query: 623 RKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
RK + V+K PGCS IE+N V+ F V D+++P IY L LT L V
Sbjct: 523 RKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLELV 576
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 201/417 (48%), Gaps = 39/417 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+ +R +VSWN+M+ GY + E+L+ M +K +E T ++
Sbjct: 128 GDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVV 187
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S CAQL L G++ HC + ++G + + + L+ Y C +E A+++FD + +
Sbjct: 188 SSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMV 247
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ML F +MP KDVV W +I GY + G ++AL LF M+
Sbjct: 248 SWTTML---------------FDEMPDKDVVPWNAMIGGYVHANRG-KEALALFNEMQAM 291
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
N P+E T S + AC++LGA G +H + K + ++G ALI+ Y C
Sbjct: 292 NIN-PDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITK 350
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAV 327
A++V+ L ++I+GL G A F+ + + + +++ ++
Sbjct: 351 AIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCH 410
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V++ ++ F +M + +S P+++ ++ M+ + L E+A +L
Sbjct: 411 GGLVEEGRKYFSQMSSKFNLS--------PKLKH----YSCMVDLLGRAGLLEEAEEL-- 456
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMY 443
++ + I+ + LF AC G++ G+ + L++ P +S +YV L +MY
Sbjct: 457 -IKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYV--LLANMY 510
>gi|359477774|ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 691
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 204/652 (31%), Positives = 335/652 (51%), Gaps = 45/652 (6%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I++C RNG A+ LFD+MP R V++N M+ GY + F E +SL M ++
Sbjct: 45 NSRISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDI- 103
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+++T+++ + + +I + + + SG Y + I EA RV
Sbjct: 104 ---FSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISG----YVSNGLIGEALRV 156
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F + + + W+L++ G V + A + F +M +D+ WT +ISG A S +A
Sbjct: 157 FSGMVLKDVVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLA-SAGRIVEA 215
Query: 202 LKLFRWMRESGENMP--NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE-FDESIGGA 258
LF E+MP + ++++I G G+V+ + + F ++E I G
Sbjct: 216 RGLF-------EDMPVRDVRAWNTMIAGYIENGCIEIGEVLFQKMPQRDFRSWNEMINGL 268
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
+ + AMR++ + C + NS++ GLI G I++A + ++++S+
Sbjct: 269 VRN-----QRIQDAMRLFVEMPQKCRRSWNSIVFGLIRNGLIKEAHAFLEKSPFSDTVSW 323
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
++I GY G+VD + +FE MP R+ WN +I G +N+
Sbjct: 324 TNLIVGYFETGEVDTAVSIFELMP-----------------ARDATAWNVIIWGLGENDH 366
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
E+ L+ ++ M++ +TF+ + CS L +L G+ +HA + KT F V V +
Sbjct: 367 GEEGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNA 426
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
+V +Y+RCG+ N A FS++ S + +W +++ G +H+G G EA+ +FE M DI PN
Sbjct: 427 MVTLYARCGNSNSALLLFSAMRSHDFISWNSIICGLAHNGNGVEAIEVFEKMRSIDIKPN 486
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV-PTLEHYTCVVDLLGRSGHLHEAEEFI 557
TFVGVLSAC AGLV++G F MK + PT+EHYTC+VDLLGR G + EA F+
Sbjct: 487 HITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLGRFGLIDEAMSFL 546
Query: 558 KDMP---IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
+ M +E+ A VWGA+L AC NM+VGE A +++ ++ Y+IL+ +Y G
Sbjct: 547 RQMEANGVEVPASVWGAVLGACRIHKNMQVGEIAGERILEIEPHNSGVYIILAEMYLSSG 606
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
K + R+ VKK P CSW+E+N H F D ++P + + L
Sbjct: 607 KREDAERVWVRMREKGVKKQPACSWMEVNGSGHVFLSGDSSHPQFSRVCGVL 658
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 147/304 (48%), Gaps = 31/304 (10%)
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
L NS I+ + G E+A+++F+ + + N+++YN+MI+GY G + LF++MP
Sbjct: 41 LKPLNSRISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPE 100
Query: 344 RSIISLNTMIS-------------VIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTM 389
R I S NTMI+ + +M R+ V+WNSMISGYV N L +AL+++ M
Sbjct: 101 RDIFSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGM 160
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+ + +++++ +G + L K ++ T+++ + G I
Sbjct: 161 ----VLKDVVSWNLVIAGLVGVGKVD----LAEEFFKEMGTRDIASWTTMISGLASAGRI 212
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+A+ F + +V AW ++ GY +G +LF+ M ++D ++ +++
Sbjct: 213 VEARGLFEDMPVRDVRAWNTMIAGYIENGCIEIGEVLFQKMPQRDF----RSWNEMINGL 268
Query: 510 VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
VR + + M++F M + +V L R+G + EA F++ P D V W
Sbjct: 269 VRNQRIQDAMRLFVEMPQ----KCRRSWNSIVFGLIRNGLIKEAHAFLEKSPFS-DTVSW 323
Query: 570 GALL 573
L+
Sbjct: 324 TNLI 327
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 117/546 (21%), Positives = 235/546 (43%), Gaps = 52/546 (9%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E I S N I + G + A +F +MP R VVSWN+M+ GY E+L + S
Sbjct: 100 ERDIFSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSG 159
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M +V +++ +++ + + ++ + + + SGL A+
Sbjct: 160 MVLKDV----VSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGL----ASAGR 211
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I EA+ +F+++ + W+ M+ GY++ + +F KMP++D W ++I+G ++
Sbjct: 212 IVEARGLFEDMPVRDVRAWNTMIAGYIENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRN 271
Query: 195 VDGCEKALKLFRWMRESGENMPNE--YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+ A++LF MP + +++S++ R G E H L K F
Sbjct: 272 -QRIQDAMRLFV-------EMPQKCRRSWNSIVFGLIRNGLIKEA---HAFLEKSPFSDT 320
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
S ++ ++ E D A+ +++ + A N +I GL E+ F ++ E
Sbjct: 321 VSWTNLIVGYFETGEV-DTAVSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKE 379
Query: 313 A----NSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISL-------NT 351
+ ++ S++ G ++ QV + + ++++L N+
Sbjct: 380 GGPFPDEATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNS 439
Query: 352 MISVIPEMERNP-VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
+ + M + ++WNS+I G N +A++++ MR + I TF + ACS
Sbjct: 440 ALLLFSAMRSHDFISWNSIICGLAHNGNGVEAIEVFEKMRSIDIKPNHITFVGVLSACSH 499
Query: 411 LGSLQQGQLLHAHL-VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV----A 465
G + QG+ + K E + T +VD+ R G I++A + + + V +
Sbjct: 500 AGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLGRFGLIDEAMSFLRQMEANGVEVPAS 559
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP-NAATFVGVLSACVRAGLVNEGMKIFRS 524
W A++ H + E +LE I P N+ ++ + + +G + +++
Sbjct: 560 VWGAVLGACRIHKNMQVGEIAGERILE--IEPHNSGVYIILAEMYLSSGKREDAERVWVR 617
Query: 525 MKSYGV 530
M+ GV
Sbjct: 618 MREKGV 623
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 193/652 (29%), Positives = 313/652 (48%), Gaps = 77/652 (11%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+ G + AR +FD+M R V SW ++ Y ++E++ L M V+ + F
Sbjct: 57 QTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPK 116
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+ C++L + GK ++ +L G+E N
Sbjct: 117 VFKACSELKNYRVGKDVYDYMLSIGFE-------------------------------GN 145
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ +L +++C M A F ++ KDV +W ++SGY S +KAL +FR M
Sbjct: 146 SCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYT-SKGEFKKALNVFRKMV 204
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGALIEFYCGCEA 268
G PN T S + AC L G+ +HG IK + D +G +L+++Y C +
Sbjct: 205 LEGVK-PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRS 263
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM--IKGYA 326
+ A R + G I+ +L+ S+N+M + G+
Sbjct: 264 VEVARRKF---------------------GMIKQTDLV----------SWNAMLAVTGFT 292
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQL 385
YG + F++M + SV E+ R+ V WNS+IS Q+ AL L
Sbjct: 293 QYGDGKAALEFFQRM--------HIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDL 344
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
M ++ T ACS L +L+QG+ +H +++ ++ ++ SL+DMY R
Sbjct: 345 LREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGR 404
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CGSI ++ F + ++ +W +++ Y HG G +AV LF+ + PN TF +
Sbjct: 405 CGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNL 464
Query: 506 LSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
LSAC +GL+ EG K F+ MK+ Y + P +E Y C+VDLL R+G +E EFI+ MP E
Sbjct: 465 LSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEP 524
Query: 565 DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRK 624
+A VWG+LL AC N ++ E AA+ +F L+ + YV+++NIY+ G+W IR
Sbjct: 525 NAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRC 584
Query: 625 RLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ V K PGCSWIE+ ++H+F V D ++P I A +E L ++ +
Sbjct: 585 LMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEI 636
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 119/252 (47%), Gaps = 24/252 (9%)
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
D + +Y + C N + +G A+L+ N + + + +++ Y G
Sbjct: 7 DECIEIYASILQKCRKLYN------LRLGFQVHAQLVVNGVDVCEFLG-SRLLEVYCQTG 59
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
V+D++R+F+KM ERN +W +++ Y +E+ ++L+ M
Sbjct: 60 CVEDARRMFDKMS-----------------ERNVFSWTAIMEMYCGLGDYEETIKLFYLM 102
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+ F +F ACS L + + G+ ++ +++ FE N V S++DM+ +CG +
Sbjct: 103 VNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRM 162
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+ A+ F I +V W +++GY+ G +A+ +F M+ + + PN+ T +SAC
Sbjct: 163 DIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSAC 222
Query: 510 VRAGLVNEGMKI 521
L+ G +I
Sbjct: 223 TNLSLLRHGREI 234
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 9/185 (4%)
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
D ++ + C L +L+ G +HA LV + ++G+ L+++Y + G + DA+
Sbjct: 7 DECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARR 66
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F +S NV +WTA+M Y G E + LF +M+ + + P+ F V AC
Sbjct: 67 MFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKN 126
Query: 515 VNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
G ++ M S G E +CV +D+ + G + A F +++ + D +W
Sbjct: 127 YRVGKDVYDYMLSIG----FEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWN 181
Query: 571 ALLSA 575
++S
Sbjct: 182 IMVSG 186
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I GR G + +R +FD MP R +VSWN M+ Y ++++L +K
Sbjct: 396 NSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLK 455
Query: 82 LNETTFSTILSVCAQLNSLIDG 103
N TF+ +LS C+ + +G
Sbjct: 456 PNHITFTNLLSACSHSGLIEEG 477
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 207/702 (29%), Positives = 336/702 (47%), Gaps = 96/702 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-H 76
+V + +T G L + F + + + SWN+M+ Y + ++ +S+ V+ +
Sbjct: 83 VVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLS 142
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
S V+ + TF +L C SL DG+++HC VLK G+E +V + L+ Y+ +E
Sbjct: 143 LSGVRPDFYTFPPVLKACL---SLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVE 199
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A +VF + MP +DV W +ISG+ ++ +
Sbjct: 200 VAHKVF-------------------------------VDMPVRDVGSWNAMISGFCQNGN 228
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E AL++ M+ M + T S++ CA+ G +VH +IK G E D +
Sbjct: 229 VAE-ALRVLDRMKTEEVKM-DTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVS 286
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN------------------------ 292
ALI Y A RV+D +E L + NS+I
Sbjct: 287 NALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMR 346
Query: 293 -------------GLIS---MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
G +S +GR ++ R E + + N+++ YA G +D ++
Sbjct: 347 PDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARA 406
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK-LAID 395
+FE++P R +IS WN++I+GY QN L +A+ Y M + I
Sbjct: 407 VFEQLPSRDVIS-----------------WNTLITGYAQNGLASEAIDAYNMMEEGRTIV 449
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
+ T+ + A S +G+LQQG +H L+K +V+V T L+DMY +CG + DA +
Sbjct: 450 PNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSL 509
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F I W A+++ HG G +A+ LF+ M + + TFV +LSAC +GLV
Sbjct: 510 FYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLV 569
Query: 516 NEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+E F +M K Y + P L+HY C+VDL GR+G+L +A + +MPI+ DA +WG LL+
Sbjct: 570 DEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLA 629
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
AC N E+G A+ ++ +D + + YV+LSNIYA +GKW + +R ++K
Sbjct: 630 ACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKT 689
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
PG S + + S V F ++++P C IY L L A + S+
Sbjct: 690 PGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSL 731
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 129/530 (24%), Positives = 235/530 (44%), Gaps = 97/530 (18%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
F+ + C +N KQ+H L+L G + + L+ YA ++ + F +
Sbjct: 54 FNLVFRSCTNINV---AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
N W+ M+ YV+ D+ D T+L+S + G
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCV-----------TELLS-----LSGVR------- 147
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
P+ YTF V++AC L +G+ +H ++K GFE D + +LI Y
Sbjct: 148 ---------PDFYTFPPVLKACLSLA---DGEKMHCWVLKMGFEHDVYVAASLIHLYSRF 195
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT--------------- 311
A + A +V+ + + + N++I+G G + +A + +R+
Sbjct: 196 GAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSML 255
Query: 312 ------------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
E++ N++I Y+ +G++ D++R+F+ M R ++
Sbjct: 256 PICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLV 315
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
S WNS+I+ Y QN+ AL + M + + T L
Sbjct: 316 S-----------------WNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASI 358
Query: 408 CSCLGSLQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
L + G+ +H +V+ + E ++ +G +LV+MY++ GSI+ A+A F + S +V +
Sbjct: 359 FGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVIS 418
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLE-QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
W L+ GY+ +GL SEA+ + +M E + IVPN T+V +L A G + +GMKI +
Sbjct: 419 WNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRL 478
Query: 526 KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + TC++D+ G+ G L +A ++P E +V W A++S+
Sbjct: 479 IKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQE-TSVPWNAIISS 527
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 189/438 (43%), Gaps = 53/438 (12%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + +N I + G+L A+ +FD M +R +VSWN+++ Y + +L
Sbjct: 280 ESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKE 339
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY-ECFEFVGSGLLFFYANCF 133
M ++ + T ++ S+ QL+ G+ +H V++ + E +G+ L+ YA
Sbjct: 340 MLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLG 399
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
I+ A+ VF++L P +DV+ W LI+GYA+
Sbjct: 400 SIDCARAVFEQL-------------------------------PSRDVISWNTLITGYAQ 428
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ E A+ + M E +PN+ T+ S++ A + +GA +G +HG LIK D
Sbjct: 429 NGLASE-AIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDV 487
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL--- 310
+ LI+ Y C + AM ++ + N++I+ L G E A +F +
Sbjct: 488 FVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRAD 547
Query: 311 -TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+A+ I++ S++ + G VD+++ F+ M I P ++ + M
Sbjct: 548 GVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIK--------PNLKH----YGCM 595
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ + + EKA L M I S + L AC G+ + G L++
Sbjct: 596 VDLFGRAGYLEKAYNLVSNM---PIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDS 652
Query: 430 ESNVYVGTSLVDMYSRCG 447
E NV L ++Y+ G
Sbjct: 653 E-NVGYYVLLSNIYANVG 669
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 206/631 (32%), Positives = 322/631 (51%), Gaps = 49/631 (7%)
Query: 91 LSVCAQLNSLIDGKQI-HCLVLK-SGYECF-------EFVGSGLLF----FYANCFEIEE 137
+S A N + QI C VLK Y CF FV F FYA+ +
Sbjct: 8 ISPLATKNQKVTTPQIPRCFVLKFVKYLCFSSALHPEHFVNHDHCFNSDSFYASLIDNST 67
Query: 138 AKRVFDELH--------EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
KR D++H + N L + ++ G + A +F + DV +W +I
Sbjct: 68 HKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIR 127
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
Y+++ + ++++RWMR +G + P+ +TF V++AC L F ++HG +IK GF
Sbjct: 128 SYSRN-NMYRDTVEMYRWMRWTGVH-PDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGF 185
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
D + L+ Y C A V+D L + + + S+I+G G+ +A +F++
Sbjct: 186 GSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQ 245
Query: 310 L-------------------TEANSISYNSMIKGYAV-YGQVDDSKRLFEKMPHRSIISL 349
+ T+ + + I G+ + G D+ L + L
Sbjct: 246 MRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGL 305
Query: 350 NTMI-SVIPEMER-NPVTWNSMISGYVQNNLHEKALQL--YMTMRKLAIDRTRSTFSVLF 405
T+ S +M+ N + WN+MISGY +N E+A+ L YM R + D +VL
Sbjct: 306 VTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVL- 364
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
A + +GSL+ Q + ++ K+ + S+++V TSL+DMY++CGS+ A+ F S +V
Sbjct: 365 -ASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVV 423
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
W+A++ GY HG G EA+ L+ +M + + PN TF+G+L+AC +GLV EG ++F M
Sbjct: 424 MWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM 483
Query: 526 KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
K + +VP EHY+CVVDLLGR+G+L EA FI +PIE VWGALLSAC + + +G
Sbjct: 484 KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLG 543
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
E AA K+F LD YV LSN+YA W +R + + KD G S IE+N +
Sbjct: 544 EYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGK 603
Query: 646 VHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ AF V D+++P I+ L+ L L V
Sbjct: 604 LQAFHVGDKSHPMAKEIFDELQRLERRLKEV 634
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 208/466 (44%), Gaps = 58/466 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
GQ+ AR LFD+ V WN ++ YS+ + +++ + M + V + TF +L
Sbjct: 102 GQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVL 161
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C +L IH ++K G+ FV +GL+ YA C I AK VFD L+ +
Sbjct: 162 KACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIV 221
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ++ GY Q K+V+ AL++F MR +
Sbjct: 222 SWTSIISGYAQ----------------------------NGKAVE----ALRMFSQMRNN 249
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+ S++RA + +G+ +HG +IK G E + ++ +L FY C
Sbjct: 250 GVK-PDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTV 308
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN----RLTEANSISYNSMIKGYAV 327
A +D+++ + N++I+G G E+A +F+ R + +S++ S + A
Sbjct: 309 AKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQ 368
Query: 328 YGQVDDSKRL---FEKMPHRSIISLNT-MISVIPE----------MERNP----VTWNSM 369
G ++ ++ + K + S I +NT +I + + +RN V W++M
Sbjct: 369 VGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAM 428
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTP 428
I GY + +A+ LY M++ + TF L AC+ G +++G +L H
Sbjct: 429 IMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEI 488
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG 473
N + + +VD+ R G + +A A I P V+ W AL++
Sbjct: 489 VPRNEHY-SCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSA 533
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 119/519 (22%), Positives = 213/519 (41%), Gaps = 95/519 (18%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A+ +FD + RT+VSW +++ GY++ K E+L + S M + VK + +IL
Sbjct: 203 GHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSIL 262
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
++ L G+ IH V+K G E + L FYA C + AK FD++ N +
Sbjct: 263 RAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVI 322
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+W+ M+ GY + +G+A E+A+ LF +M S
Sbjct: 323 MWNAMISGYAK--------------------------NGHA------EEAVNLFHYMI-S 349
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+ T S + A A++G+ + + + K + D + +LI+ Y C + +
Sbjct: 350 RNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEF 409
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A RV+DR NS + + + +++MI GY ++GQ
Sbjct: 410 ARRVFDR---------NS----------------------DKDVVMWSAMIMGYGLHGQG 438
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
++ L+ M + N VT+ +++ + L ++ +L+ M+
Sbjct: 439 WEAINLYHVMKQAGVFP-------------NDVTFIGLLTACNHSGLVKEGWELFHCMKD 485
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS--RCGSI 449
I +S + G L + A ++K P E V V +L+ RC ++
Sbjct: 486 FEIVPRNEHYSCVVDLLGRAGYLGEAC---AFIMKIPIEPGVSVWGALLSACKIYRCVTL 542
Query: 450 NDAQAS-FSSISSPNVAAWTALMNGYSHHGL----GSEAVLLFEIMLEQDIVPNA----- 499
+ A+ S+ N + L N Y+ L VL+ E L +D+ +
Sbjct: 543 GEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEING 602
Query: 500 ---ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
A VG S + + +E ++ R +K G VP E
Sbjct: 603 KLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTE 641
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 38/228 (16%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVT-ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL 69
L + L++S +CG LVT A++ FDQM V+ WN M+ GY+K +E++
Sbjct: 286 LEDEPALLISLTAFYAKCG----LVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAV 341
Query: 70 SLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY 129
+L M N+K + T + + AQ+ SL + + V KS Y FV + L+ Y
Sbjct: 342 NLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMY 401
Query: 130 ANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
A C +E A+RVFD + + ++WS M++GY L ++
Sbjct: 402 AKCGSVEFARRVFDRNSDKDVVMWSAMIMGY---GLHGQGWE------------------ 440
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
A+ L+ M+++G PN+ TF ++ AC G EG
Sbjct: 441 -----------AINLYHVMKQAGV-FPNDVTFIGLLTACNHSGLVKEG 476
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 193/635 (30%), Positives = 320/635 (50%), Gaps = 91/635 (14%)
Query: 40 LFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLN 98
+F+ +P T ++W +++ Y+ F SLS M S + F ++L C +
Sbjct: 61 IFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMK 120
Query: 99 SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA---KRVFDELHEDNELLWSL 155
L G+ +H +++ G + + L+ Y+ + +EE K+VFDE + +++
Sbjct: 121 DLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDE-GKTSDVYSKK 179
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
Y +L VF MPK+D+V W +ISG A++ E AL + R M + +
Sbjct: 180 EKESYYLGSLRK----VFEMMPKRDIVSWNTVISGNAQN-GMHEDALMMVREM-GNADLR 233
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ +T SV+ A +GK +HG I+ G++ D IG +LI+ Y C
Sbjct: 234 PDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCT-------- 285
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
R++D+ +F L + + IS+NS+I G G D+
Sbjct: 286 -----------------------RVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGL 322
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
+ F++M +I +++ N V+++S++
Sbjct: 323 KFFQQM-------------LIAKIKPNHVSFSSIMP------------------------ 345
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
AC+ L +L G+ LH +++++ F+ NV++ ++LVDMY++CG+I A+
Sbjct: 346 -----------ACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWI 394
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F + ++ +WTA++ GY+ HG +A+ LF+ M + + PN F+ VL+AC AGLV
Sbjct: 395 FDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLV 454
Query: 516 NEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+E K F SM + Y ++P LEHY V DLLGR G L EA EFI DM IE VW LL+
Sbjct: 455 DEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLA 514
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
AC N+E+ E+ ++K+F +D + I AYV+LSNIY+ G+W +R + +KK
Sbjct: 515 ACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKK 574
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
P CSWIE+ ++VHAF D+++P + I L+ L
Sbjct: 575 PACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVL 609
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 196/424 (46%), Gaps = 53/424 (12%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L + R +F+ MP R +VSWNT++ G ++ +++L +V M ++++ + T S++L +
Sbjct: 186 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 245
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
A+ +L+ GK+IH +++GY+ F+GS L+ YA C ++++ RVF L + + + W
Sbjct: 246 FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISW 305
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++ G VQ + + F +M LI+
Sbjct: 306 NSIIAGCVQNGMFDEGLKFFQQM----------LIAKIK--------------------- 334
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
PN +F S++ ACA L GK +HG +I+ F+ + I AL++ Y C A
Sbjct: 335 --PNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTAR 392
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYG 329
++D++E + + ++I G G DA +F R+ + N +++ +++ + G
Sbjct: 393 WIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAG 452
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
VD++ + F M +IP +E + + G V + + Y +
Sbjct: 453 LVDEAWKYFNSMTQD--------YRIIPGLEHYAAVADLL--GRVG-----RLEEAYEFI 497
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+ I+ T S +S L AC +++ + + L T N+ L ++YS G
Sbjct: 498 SDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLF-TVDPQNIGAYVLLSNIYSAAGRW 556
Query: 450 NDAQ 453
DA+
Sbjct: 557 KDAR 560
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 186/430 (43%), Gaps = 68/430 (15%)
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV-WTKLISGYAKSVDGCEKALKLFRWMRE 210
L S +L Y NL+ D+ +F +P + W +I Y S +L F M
Sbjct: 41 LLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYT-SHGLFLHSLSFFIQMLA 99
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC---GCE 267
SG+ P+ F SV+++C + G+ VHG +I+ G FD AL+ Y E
Sbjct: 100 SGK-YPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLE 158
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAV 327
+ +V+D G+ D ++++ E S S+
Sbjct: 159 EVNTYKKVFDE-------------------GKTSD---VYSK-KEKESYYLGSL------ 189
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
+++FE MP R I+S WN++ISG QN +HE AL +
Sbjct: 190 -------RKVFEMMPKRDIVS-----------------WNTVISGNAQNGMHEDALMMVR 225
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
M + T S + + +L +G+ +H + ++ ++++V++G+SL+DMY++C
Sbjct: 226 EMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCT 285
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
++D+ F + + +W +++ G +G+ E + F+ ML I PN +F ++
Sbjct: 286 RVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMP 345
Query: 508 ACVRAGLVNEGMK----IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
AC ++ G + I RS V + +VD+ + G++ A M +
Sbjct: 346 ACAHLTTLHLGKQLHGYIIRSRFDGNVFIA----SALVDMYAKCGNIRTARWIFDKMEL- 400
Query: 564 LDAVVWGALL 573
D V W A++
Sbjct: 401 YDMVSWTAMI 410
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + TAR +FD+M + +VSW M+ GY+ +++SL M VK N F +L
Sbjct: 386 GNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVL 445
Query: 92 SVCAQ 96
+ C+
Sbjct: 446 TACSH 450
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 199/670 (29%), Positives = 329/670 (49%), Gaps = 59/670 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G++ A +F +MP R V SWN M+ GY K +E+L L M + ++ + TF
Sbjct: 143 RFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPC 202
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C + G+++H VL+ G+ V + L+ YA C +I A++VFD + +
Sbjct: 203 VLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTD 262
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ G+ + + CE L+LF M
Sbjct: 263 CISWNAMIAGHFENH--------------------------------ECEAGLELFLTML 290
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E+ E PN T SV A L K +HG +K GF D + +LI+ Y
Sbjct: 291 EN-EVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRM 349
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI-----KG 324
A +++ R+E + ++I+G G D L L E +++S + +
Sbjct: 350 GDAGKIFSRMETKDAMSWTAMISGYEKNG-FPDKALEVYALMELHNVSPDDVTIASALAA 408
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTW 366
A G++D +L E ++ I + + + EM E++ V+W
Sbjct: 409 CACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSW 468
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+SMI+G+ N+ +AL + M + TF AC+ G+L+ G+ +HA++++
Sbjct: 469 SSMIAGFCFNHRSFEALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLR 527
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
S YV +L+D+Y +CG + A A FS S +V +W +++G+ HGLG A+ L
Sbjct: 528 CGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSL 587
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLG 545
F M+E P+ TFV +L AC RAG+V +G ++F M + + +VP L+HY C+VDLL
Sbjct: 588 FNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLS 647
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R G L EA I MPI+ DA VWGALL+ C ++E+GE AA+ + L+ ++ +V+
Sbjct: 648 RVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVL 707
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
L ++Y GKW + +RK + +++D GCSW+E+ HAF +D ++P I
Sbjct: 708 LCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVV 767
Query: 666 LEHLTANLNS 675
L + + +
Sbjct: 768 LHGIYERMKA 777
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 205/452 (45%), Gaps = 38/452 (8%)
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
L + ML V+ + A+ VF KMP++DV W ++ GY K V E+AL L+ M +
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGK-VGFLEEALDLYYRMLWA 191
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+ YTF V+R C + + G+ VH +++ GF + + AL+ Y C
Sbjct: 192 GMR-PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRL---TEANSISYNSMIKGYAV 327
A +V+D + + N++I G E EL L + N ++ S+ +
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310
Query: 328 YGQVDDSKRLFEKMPHR----------SIISLNTMIS-------VIPEME-RNPVTWNSM 369
+V +K + R S+I + T + + ME ++ ++W +M
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
ISGY +N +KAL++Y M + T + AC+CLG L G LH F
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
V V +L++MY++ I+ A F ++ +V +W++++ G+ + EA+ F
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRY 490
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR-----SMKSYGVVPTLEHYTCVVDLL 544
ML + PN+ TF+ LSAC G + G +I + S G VP ++DL
Sbjct: 491 MLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP-----NALLDLY 544
Query: 545 GRSGHLHEA-EEFIKDMPIELDAVVWGALLSA 575
+ G A +F + E D V W +LS
Sbjct: 545 VKCGQTSYAWAQF--SVHSEKDVVSWNIMLSG 574
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 18/257 (7%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N + ++ + A +F M + VVSW++M+ G+ + E+L M
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-L 492
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+VK N TF LS CA +L GK+IH VL+ G +V + LL Y C +
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGYAK 193
A F E + + W++ML G+V L A +F +M D V + L+ ++
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612
Query: 194 S---VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
+ + G E LF M E +PN + ++ +R+G E + L+ + +
Sbjct: 613 AGMVIQGWE----LFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEA---YNLINRMPIK 665
Query: 251 FDESIGGALIEFYCGCE 267
D ++ GAL+ GC
Sbjct: 666 PDAAVWGALLN---GCR 679
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 137/330 (41%), Gaps = 64/330 (19%)
Query: 257 GALIEFYCGCE---AFDGAMRVYDRL--ENPC--LNASNSLINGLISMGRIEDAELIFNR 309
GA + + CE A D MR R E+P L N++++ L+ G I A +F +
Sbjct: 97 GAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAK 156
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ E + S+N M+ GY G ++++ L+ +M
Sbjct: 157 MPERDVFSWNVMVGGYGKVGFLEEALDLYYRM---------------------------- 188
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
L+ MR TF + C + + G+ +HAH+++ F
Sbjct: 189 ---------------LWAGMRP-----DVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGF 228
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
V V +LV MY++CG I A+ F ++ + +W A++ G+ + + LF
Sbjct: 229 GDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLT 288
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY----GVVPTLEHYTCVVDLLG 545
MLE ++ PN T + S V +G+++E + + M + G + ++ +
Sbjct: 289 MLENEVQPNLMT---ITSVTVASGMLSE-VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYT 344
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + +A + M + DA+ W A++S
Sbjct: 345 SLGRMGDAGKIFSRMETK-DAMSWTAMISG 373
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 204/677 (30%), Positives = 319/677 (47%), Gaps = 59/677 (8%)
Query: 21 TNKAITECGRNGQLVTARNLFDQM-PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N I + G L +A +F+ M R V SWN+M+ G + F ++L L M R+
Sbjct: 202 ANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAV 261
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ +N T +L VC +L L G+++H +LKSG E + LL Y C ++ A
Sbjct: 262 LSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSE-VNIQCNALLVMYTKCGRVDSAL 320
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
RVF E+ E + + W+ ML YVQ L ++A + +M +
Sbjct: 321 RVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLR--------------------- 359
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
G P+ S+ A LG GK VH IK + D +G L
Sbjct: 360 ------------GGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTL 407
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYN 319
++ Y C + + V+DR+ + ++I R +A IF R + I +
Sbjct: 408 MDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIF-REAQKEGIKVD 466
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPH--------RSIISLNTMISVIPEM------------ 359
M+ G + L K H ++ N +I + E
Sbjct: 467 PMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFET 526
Query: 360 --ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
+++ VTW SMI+ Y + L +AL L+ M+ + + A L SL +G
Sbjct: 527 VEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKG 586
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+ +H L++ F + +SLVDMYS CGS++ A F+++ ++ WTA++N H
Sbjct: 587 KEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMH 646
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEH 536
G G +A+ LF+ ML+ + P+ +F+ +L AC + LVNEG M S Y + P EH
Sbjct: 647 GHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEH 706
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
Y CVVDLLGRSG EA EFIK MP++ +VVW +LL AC N E+ AA ++ L+
Sbjct: 707 YACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELE 766
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
YV++SN++A +GKW ++R R++ ++KDP CSWIE+ + VH F+ D ++
Sbjct: 767 PDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSH 826
Query: 657 PNCNVIYATLEHLTANL 673
+ I L +T L
Sbjct: 827 RDAERINLKLAEITERL 843
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 134/576 (23%), Positives = 260/576 (45%), Gaps = 68/576 (11%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH---RSNVKLNET 85
G+ G++ AR LFD M RTV SWN ++ Y E+L + M S V +
Sbjct: 106 GKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGC 165
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T +++L G ++H L +K G + FV + L+ YA C ++ A RVF+ +
Sbjct: 166 TLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELM 225
Query: 146 HEDNELL-WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
H+ ++ W+ M+ G +Q + A D L
Sbjct: 226 HDGRDVASWNSMISGCLQNGMFLQALD--------------------------------L 253
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
FR M+ + +M N YT V++ C L G+ +H L+K G E + AL+ Y
Sbjct: 254 FRGMQRAVLSM-NSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC-NALLVMYT 311
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRL------TEANSIS 317
C D A+RV+ ++ + NS+++ + G +A E I L A +S
Sbjct: 312 KCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVS 371
Query: 318 YNSMIK--GYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEME-R 361
+S + G+ + G+ + + +++ + + NT++ V M +
Sbjct: 372 LSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVG-NTLMDMYMKCRYIEYSAHVFDRMRIK 430
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ ++W ++I+ Y Q++ H +AL+++ +K I + ACS L ++ + LH
Sbjct: 431 DHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLH 490
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
+ ++ ++ V ++D+Y CG + + F ++ ++ WT+++N Y++ GL +
Sbjct: 491 CYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLN 549
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI--FRSMKSYGVVPTLEHYTC 539
EA++LF M D+ P++ V +L A + +G ++ F +++ + + +
Sbjct: 550 EALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAI--VSS 607
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+VD+ G L A + + + D V+W A+++A
Sbjct: 608 LVDMYSGCGSLSGALKVFNAVKCK-DMVLWTAMINA 642
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 207/474 (43%), Gaps = 67/474 (14%)
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
L D+ L + +L Y +C ++DA +F M + V W LI Y S CE AL +
Sbjct: 90 LEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACE-ALGV 148
Query: 205 FRWMRESGEN--MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
+R MR S + P+ T SV++A G G VHGL +K G + + ALI
Sbjct: 149 YRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAM 208
Query: 263 YCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRLTEA----NS-- 315
Y C D AMRV++ + + AS NS+I+G + G A +F + A NS
Sbjct: 209 YAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYT 268
Query: 316 --------------------------------ISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
I N+++ Y G+VD + R+F ++
Sbjct: 269 TVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLVMYTKCGRVDSALRVFREID- 327
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
E++ ++WNSM+S YVQN L+ +A++ M + +
Sbjct: 328 ----------------EKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVS 371
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
L A LG L G+ +HA+ +K +S+ VG +L+DMY +C I + F + +
Sbjct: 372 LSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKD 431
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+WT ++ Y+ EA+ +F ++ I + +L AC +GL E + + +
Sbjct: 432 HISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEAC--SGL--ETILLAK 487
Query: 524 SMKSYGVVPTLEHYTC---VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+ Y + L ++D+ G G ++ + + + + + D V W ++++
Sbjct: 488 QLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVE-QKDIVTWTSMIN 540
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%), Gaps = 33/221 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N+ I G G++ + +F+ + + +V+W +M+ Y+ +E+L L + M
Sbjct: 501 LVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQS 560
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++V+ + +IL L+SL GK++H +++ + E + S L+ Y+ C +
Sbjct: 561 TDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSG 620
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +VF+ V+C KD+V+WT +I+ G
Sbjct: 621 ALKVFNA----------------VKC---------------KDMVLWTAMINATGMHGHG 649
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
++A+ LF+ M ++G P+ +F +++ AC+ EGK
Sbjct: 650 -KQAIDLFKRMLQTGVT-PDHVSFLALLYACSHSKLVNEGK 688
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 5/169 (2%)
Query: 413 SLQQGQLLHAHLVKT-PFESN-VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
++ QG +HAH V T E + ++ T L+ MY +CG + DA+ F +SS V +W AL
Sbjct: 73 AVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNAL 132
Query: 471 MNGYSHHGLGSEAVLLFEIM---LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
+ Y G EA+ ++ M + P+ T VL A G G ++
Sbjct: 133 IGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVK 192
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+G+ + ++ + + G L A + M D W +++S C
Sbjct: 193 HGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGC 241
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 201/649 (30%), Positives = 311/649 (47%), Gaps = 84/649 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R+G L AR LFD++P +NT++ YS E+L L + + + NE T
Sbjct: 60 RDGGLCHARRLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPF 119
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C + ++ H +V+K G+ FV + LL F+A+ + +++R F E
Sbjct: 120 VLKACTTVRAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGE----- 174
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
M ++VV W +I GYA++ + E A LF MR
Sbjct: 175 --------------------------MADRNVVSWNTMIGGYAQAGEVSE-ACALFGEMR 207
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G + + +T S++ AC+ G G++VH ++ G D +G AL++ Y C
Sbjct: 208 HQGL-LADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKC--- 263
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
G + A F+ + N +++ SM+ A +G
Sbjct: 264 ----------------------------GDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHG 295
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ-NNLHEKALQLYMT 388
VD + FE+MP ERN V+WN+MIS YVQ LHE L LY
Sbjct: 296 SVDAVRDWFEQMP-----------------ERNIVSWNAMISCYVQCGRLHE-TLDLYNR 337
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
MR L I T + + AC G L G+++H ++ + V + SL+DMY+RCG
Sbjct: 338 MRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFNDPGVTLLNSLLDMYARCGQ 397
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
++ A F+ + + NV +W ++ + HG E V F M+ P+ TFVG+LSA
Sbjct: 398 VDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSA 457
Query: 509 CVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C GL+ G F +M + Y V P +EHY C+VDLLGR GHL +A IKDM I+ D V
Sbjct: 458 CSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVV 517
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
VWGALL AC N+E+G+ +++ L+ +V++ N++ +W +RK +
Sbjct: 518 VWGALLGACRIHGNVEIGKLVIKQLLELEGITGGLFVLICNLFYETNQWEDMKKLRKLMK 577
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
KKD G S IE+ + +H F VED + + N IYA ++ L+ +L S+
Sbjct: 578 EQGTKKDMGVSSIEVKNIIHEFGVEDLRHESTNEIYAAVDQLSYHLVSL 626
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 152/338 (44%), Gaps = 28/338 (8%)
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVD------DSKRLFEKMPHRSIISLNTMISVI 356
A L+ + ++ +S++ + +I Y D ++RLF+++P
Sbjct: 31 AHLVVHGFSDVSSVA-SQLIASYCTLSAGDRDGGLCHARRLFDRIP-------------- 75
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
E + +N+++ Y ++ ++AL+L+ + + I T + AC+ + +++
Sbjct: 76 ---EPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEH 132
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
H +VK F ++V +L+ ++ GS+ D++ F ++ NV +W ++ GY+
Sbjct: 133 ALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQ 192
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
G SEA LF M Q ++ + T V +L AC G + G + M G
Sbjct: 193 AGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRIL 252
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
++D+ G+ G L A MPI+ + V W ++L A +++ ++M
Sbjct: 253 GNALLDMYGKCGDLWMAHRCFDMMPIK-NVVTWTSMLCAQAKHGSVDAVRDWFEQM---P 308
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
++ I ++ + + Y G+ + +D+ R+ L + D
Sbjct: 309 ERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPD 346
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 136/325 (41%), Gaps = 64/325 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V+ + ++G + R+ F+QMP R +VSWN M+ Y + + E+L L + M
Sbjct: 281 VVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRS 340
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ +E T + +LS C Q L GK IHC V + + + + LL YA C +++
Sbjct: 341 LGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFNDPGVTLLNSLLDMYARCGQVDT 400
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F +MP K+V+ W +I A
Sbjct: 401 A-------------------------------IGLFTEMPNKNVISWNVIIGALAMH-GR 428
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
++ + FR M S P+E TF ++ AC+ HG L++ G
Sbjct: 429 AQETVTFFRTM-VSDAFSPDEITFVGLLSACS-----------HGGLLEAG--------- 467
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEANSI 316
E+Y F+ RVY+ P + +++ L G + A LI + + + +
Sbjct: 468 ---EYY-----FEAMARVYN--VEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVV 517
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKM 341
+ +++ ++G V+ K + +++
Sbjct: 518 VWGALLGACRIHGNVEIGKLVIKQL 542
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 11/188 (5%)
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMY------SRCGSINDAQASFSSISSPNVAA 466
S+Q +HAHLV F V + L+ Y R G + A+ F I P+
Sbjct: 22 SIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFDRIPEPDRFM 81
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
+ L+ YS+ EA+ L +L++ I+PN T VL AC V + +
Sbjct: 82 YNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEHALAAHGVVV 141
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
G V + ++ +G L ++ F +M + + V W ++ + EV E
Sbjct: 142 KLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMA-DRNVVSWNTMIGG--YAQAGEVSE 198
Query: 587 RAAQKMFG 594
A +FG
Sbjct: 199 ACA--LFG 204
>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 199/677 (29%), Positives = 330/677 (48%), Gaps = 58/677 (8%)
Query: 23 KAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL 82
K ++ + G L AR +FD M R + +W+ M+ YS+ ++ E + L M V
Sbjct: 119 KLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLP 178
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
+ F IL C L K IH LV++ G C+ + + +L + C ++ A++ F
Sbjct: 179 DAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFF 238
Query: 143 DELHEDNELLWSLMLVGYVQ-------------------------CNLMSDAF------D 171
+ E + + W++M+ GY Q N+M ++ D
Sbjct: 239 GNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCD 298
Query: 172 VFIKMPKK--------DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+ I + KK DV WT +ISG+++S +AL F+ M +G PN T S
Sbjct: 299 LVIDLKKKMESVGLAPDVYTWTSMISGFSQS-SRISQALDFFKKMILAGVE-PNTITIAS 356
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
ACA L + G +H IK G + +G +LI+ Y C + A V+D +
Sbjct: 357 ATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKD 416
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFE 339
+ NS+I G G A +F RL E+ N +++N+MI G G D + LF+
Sbjct: 417 VYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQ 476
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
M + +RN +WNS+I+GY Q KAL ++ M+ L
Sbjct: 477 IMEKDGGV------------KRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSV 524
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T + AC+ + + ++ + +H +++ ES + V SLVD Y++ G+I ++ F+ +
Sbjct: 525 TILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGM 584
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
SS ++ W +++ GY HG A LF+ M I PN T ++ A AG+V++G
Sbjct: 585 SSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGR 644
Query: 520 KIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
+F S+ + + ++PTL+HY +VDL GRSG L +A EFI+DMPIE D +W +LL+AC F
Sbjct: 645 HVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRF 704
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
N+ + AA+++ L+ Y +L YA+ GK+ + + +RK +KK
Sbjct: 705 HGNLNLAVLAAKRLHELEPDNHVIYRLLVQAYALYGKFEQTLKVRKLGKESAMKKCTAQC 764
Query: 639 WIELNSRVHAFSVEDRN 655
W+E+ ++VH F D++
Sbjct: 765 WVEVRNKVHLFVTGDQS 781
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 215/487 (44%), Gaps = 87/487 (17%)
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
E+++ + ++ + KL+ T+ +L C + S+ G+++H + + + FV + L+
Sbjct: 63 EAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELH-VRMGLVHRVNPFVETKLV 121
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
YA C +++A++VFD + E N WS M+ Y + + ++F M V
Sbjct: 122 SMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGV----- 176
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
+P+ + F +++AC K++H L+I+
Sbjct: 177 ----------------------------LPDAFLFPKILQACGNCEDLETVKLIHSLVIR 208
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
CG + Y RL SNS++ + G++ A
Sbjct: 209 CG------------------------LSCYMRL-------SNSILTAFVKCGKLSLARKF 237
Query: 307 FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR----SIISLNTMISVIPE---- 358
F + E + +S+N MI GY G D+++RL + M ++ +++ N MI+ +
Sbjct: 238 FGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDC 297
Query: 359 --------------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+ + TW SMISG+ Q++ +AL + M ++ T +
Sbjct: 298 DLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASA 357
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
AC+ L SLQ G +H +K VG SL+DMYS+CG + A+ F +I +V
Sbjct: 358 TSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDV 417
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
W +++ GY G G +A LF + E ++PN T+ ++S C++ G ++ M +F+
Sbjct: 418 YTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQI 477
Query: 525 MKSYGVV 531
M+ G V
Sbjct: 478 MEKDGGV 484
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 128/519 (24%), Positives = 223/519 (42%), Gaps = 77/519 (14%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N +T + G+L AR F M R VSWN M+ GY + DE+ L+ TM
Sbjct: 218 SNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGF 277
Query: 81 KLNETTFSTILSVCAQLNS---LID-GKQIHCLVLK----------SGYECFEFVGSGLL 126
K T++ +++ +QL +ID K++ + L SG+ + L
Sbjct: 278 KPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALD 337
Query: 127 FFY--------ANCFEIEEAKRVFD---------ELH--------EDNELLWSLMLVGYV 161
FF N I A E+H L+ + ++ Y
Sbjct: 338 FFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYS 397
Query: 162 QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTF 221
+C + A VF + +KDV W +I GY ++ G KA +LF +RES MPN T+
Sbjct: 398 KCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYG-GKAYELFMRLRES-TVMPNVVTW 455
Query: 222 DSVIRACARLGAFCEGKVVHGLLIK-CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
+++I C + G + + ++ K G + + + +LI Y + A+ ++ +++
Sbjct: 456 NAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQ 515
Query: 281 NPCLNASNSLINGLIS-----MGRIEDAEL---IFNRLTEANSISYNSMIKGYAVYGQVD 332
+ + ++ I ++ M + E+ + R E+ NS++ YA G +
Sbjct: 516 SLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIK 575
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
S+ +F M + II TWNS+I+GY+ + + A QL+ MR L
Sbjct: 576 YSRTVFNGMSSKDII-----------------TWNSIIAGYILHGCSDSAFQLFDQMRNL 618
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT-----SLVDMYSRCG 447
I R T + + HA G + +G+ H+ + E + + T ++VD+Y R G
Sbjct: 619 GIRPNRGTLASIIHAYGIAGMVDKGR----HVFSSITEEHQILPTLDHYLAMVDLYGRSG 674
Query: 448 SINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVL 485
+ DA + P+V+ WT+L+ HG + AVL
Sbjct: 675 RLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVL 713
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 5/261 (1%)
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N L +A+ ++ K + +T+ L C +GS++ G+ LH + N +V
Sbjct: 58 NGLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRM-GLVHRVNPFV 116
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
T LV MY++CG + DA+ F + N+ W+A++ YS E V LF +M+ +
Sbjct: 117 ETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGV 176
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
+P+A F +L AC + E +K+ S+ G+ + ++ + G L A
Sbjct: 177 LPDAFLFPKILQACGNCEDL-ETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLAR 235
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP-ISAYVILSNIYAVL 613
+F +M E D V W +++ N + R M KP + Y I+ Y+ L
Sbjct: 236 KFFGNMD-ERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQL 294
Query: 614 GKWGKKMDIRKRLTHLEVKKD 634
G +D++K++ + + D
Sbjct: 295 GDCDLVIDLKKKMESVGLAPD 315
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 140/336 (41%), Gaps = 55/336 (16%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMP-----IRTVVSWNTMLCGYSKWAKFDESLSLV 72
+V+ N I+ C +NG A +LF M R SWN+++ GY + + +++L++
Sbjct: 452 VVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIF 511
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M N N T +IL CA + + K+IH VL+ E V + L+ YA
Sbjct: 512 RQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKS 571
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
I+ ++ VF+ + + + W+ ++ GY+
Sbjct: 572 GNIKYSRTVFNGMSSKDIITWNSIIAGYI------------------------------- 600
Query: 193 KSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
+ GC + A +LF MR G PN T S+I A G +G+ V + +
Sbjct: 601 --LHGCSDSAFQLFDQMRNLGIR-PNRGTLASIIHAYGIAGMVDKGRHVFSSITE----- 652
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLE-------NPCLNASNSLINGLISMGRIEDAE 304
+ I L + + + + R+ D +E P ++ SL+ G + A
Sbjct: 653 EHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAV 712
Query: 305 LIFNRLTE---ANSISYNSMIKGYAVYGQVDDSKRL 337
L RL E N + Y +++ YA+YG+ + + ++
Sbjct: 713 LAAKRLHELEPDNHVIYRLLVQAYALYGKFEQTLKV 748
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 41/181 (22%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + N + ++G + +R +F+ M + +++WN+++ GY D + L
Sbjct: 555 ESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQ 614
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++ N T ++I IH Y
Sbjct: 615 MRNLGIRPNRGTLASI---------------IHA--------------------YGIAGM 639
Query: 135 IEEAKRVFDELHEDNELLWSL-----MLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLI 188
+++ + VF + E++++L +L M+ Y + ++DA + MP + DV +WT L+
Sbjct: 640 VDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLL 699
Query: 189 S 189
+
Sbjct: 700 T 700
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 203/663 (30%), Positives = 340/663 (51%), Gaps = 63/663 (9%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-- 79
N ++ G +G + A LFD MP R +VSWN+M+ +S +ES L+ M N
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 80 --VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ T T+L VCA+ + GK +H +K
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK------------------------- 320
Query: 138 AKRVFDELHEDNELLWSLMLVG-YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
L D EL+ + L+ Y +C +++A +F K+VV W ++ G++ D
Sbjct: 321 -------LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 197 GCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+ R M GE++ +E T + + C K +H +K F ++E +
Sbjct: 374 -THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 432
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING----------LISMGRIEDAEL 305
A + Y C + A RV+ + + +N+ N+LI G L + +++ + L
Sbjct: 433 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 492
Query: 306 IFNRLTEANSISYNSMIK----GYAVYGQVDDSKRLFEKMPHRSIISLN-------TMIS 354
+ + T + +S S +K G V+G + + + + S++SL T+ +
Sbjct: 493 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQA 552
Query: 355 VIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
+ ME ++ V+WN++I+GY+QN ++AL ++ M I + +F ACS L S
Sbjct: 553 LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 612
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L+ G+ HA+ +K E + ++ SL+DMY++ GSI + F+ + + A+W A++ G
Sbjct: 613 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVP 532
Y HGL EA+ LFE M P+ TF+GVL+AC +GL++EG++ MK S+G+ P
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 732
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFI-KDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
L+HY CV+D+LGR+G L +A + ++M E D +W +LLS+C N+E+GE+ A K
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 792
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+F L+ + YV+LSN+YA LGKW +R+R+ + ++KD GCSWIELN +V +F V
Sbjct: 793 LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVV 852
Query: 652 EDR 654
+R
Sbjct: 853 GER 855
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 123/606 (20%), Positives = 248/606 (40%), Gaps = 107/606 (17%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL-SLVSTMHR 77
V + IT G +R +FD + + + WN ++ YS+ +DE L + + +
Sbjct: 121 VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIST 180
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+++ + T+ ++ CA ++ + G +H LV+K+G FVG+ L+ FY + +
Sbjct: 181 TDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD 240
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A ++FD MP++++V W +I ++ +
Sbjct: 241 ALQLFD-------------------------------IMPERNLVSWNSMIRVFSDNGFS 269
Query: 198 CEKALKLFRWMRESGEN--MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
E L L M E+G+ MP+ T +V+ CAR GK VHG +K + + +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-- 313
AL++ Y C A ++ N + + N+++ G + G D F+ L +
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVLRQMLA 386
Query: 314 ------------------------------------------NSISYNSMIKGYAVYGQV 331
N + N+ + YA G +
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
++R+F + +++ S WN++I G+ Q+N +L ++ M+
Sbjct: 447 SYAQRVFHGIRSKTVNS-----------------WNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+ T L ACS L SL+ G+ +H +++ E +++V S++ +Y CG +
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 549
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
QA F ++ ++ +W ++ GY +G A+ +F M+ I + + V AC
Sbjct: 550 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS- 608
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAV 567
+ +++ R +Y + LE + +D+ ++G + ++ + + E
Sbjct: 609 ---LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTA 664
Query: 568 VWGALL 573
W A++
Sbjct: 665 SWNAMI 670
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 180/400 (45%), Gaps = 45/400 (11%)
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
++++L + ++ Y C D+ VF + K++ W +IS Y+++ + ++ L+ F
Sbjct: 118 NDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRN-ELYDEVLETFIE 176
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M + + +P+ +T+ VI+ACA + G VHGL++K G D +G AL+ FY G
Sbjct: 177 MISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY-GTH 235
Query: 268 AF-DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS----------- 315
F A++++D + L + NS+I G E++ L+ + E N
Sbjct: 236 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 295
Query: 316 ------------ISYNSMIKGYAVYGQVDDSKRLFEK-MPHRSIISLNTMISVIPEM--E 360
I + G+AV ++D L M S T +I +M
Sbjct: 296 VTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNN 355
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL------FHACSCLGSL 414
+N V+WN+M+ G+ + M D ++L FH S L SL
Sbjct: 356 KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHE-SFLPSL 414
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
++ LH + +K F N V + V Y++CGS++ AQ F I S V +W AL+ G
Sbjct: 415 KE---LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG- 470
Query: 475 SHHGLGSEAVLLFEIMLEQDI---VPNAATFVGVLSACVR 511
H ++ L + L+ I +P++ T +LSAC +
Sbjct: 471 --HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 116/525 (22%), Positives = 214/525 (40%), Gaps = 100/525 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-- 75
+V N + + G + A+ +F + VVSWNTM+ G+S + ++ M
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+VK +E T + VC + L K++HC LK + E V + + YA C +
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A+RVF + W+ ++ G+ Q N + D ++M ISG
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK----------ISGL---- 492
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+P+ +T S++ AC++L + GK VHG +I+ E D +
Sbjct: 493 -------------------LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR------ 309
+++ Y C ++D +E+ L + N++I G + G + A +F +
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 593
Query: 310 ---------------------------------LTEANSISYNSMIKGYAVYGQVDDSKR 336
L E ++ S+I YA G + S +
Sbjct: 594 QLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F + E++ +WN+MI GY + L ++A++L+ M++ +
Sbjct: 654 VFNGLK-----------------EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP 696
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDAQA 454
TF + AC+ G + +G L + +K+ F + N+ ++DM R G ++ A
Sbjct: 697 DDLTFLGVLTACNHSGLIHEG-LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 755
Query: 455 SFSSISS--PNVAAWTALMNGYSHHG---LGSE-AVLLFEIMLEQ 493
+ S +V W +L++ H +G + A LFE+ E+
Sbjct: 756 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK 800
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 188/629 (29%), Positives = 312/629 (49%), Gaps = 88/629 (13%)
Query: 51 SWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLV 110
WN ++ Y+K + +L++ + + + + +++ ++L C Q++ GK+IH V
Sbjct: 91 QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 150
Query: 111 LKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAF 170
LK G + FVG+ L+ Y C +E A+ VFD
Sbjct: 151 LKKGLDRDVFVGNALMLMYGECACVEYARLVFD--------------------------- 183
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACAR 230
KM ++DVV W+ +I +++ + + AL+L R M + P+E S++ A
Sbjct: 184 ----KMMERDVVSWSTMIRSLSRNKE-FDMALELIREM-NFMQVRPSEVAMVSMVNLFAD 237
Query: 231 LGAFCEGKVVHGLLIKCGFEFDESIG----GALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
GK +H +I+ +E +G AL++ Y C
Sbjct: 238 TANMRMGKAMHAYVIRNSN--NEHMGVPTTTALLDMYAKC-------------------- 275
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
G + A +FN LT+ +S+ +MI G ++++++ LF+ +R +
Sbjct: 276 -----------GHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDV 324
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
+ W +M+S Y Q N ++A L+ MR + T+ T L
Sbjct: 325 M-----------------IWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLS 367
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
C+ G+L G+ +H+++ K E + + T+LVDMY++CG IN A F S ++
Sbjct: 368 LCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICM 427
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM- 525
W A++ G++ HG G EA+ +F M Q + PN TF+G+L AC AGLV EG K+F M
Sbjct: 428 WNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMV 487
Query: 526 KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
++G+VP +EHY C+VDLLGR+G L EA E IK MPI+ + +VWGAL++AC N ++G
Sbjct: 488 HTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLG 547
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
E AA ++ ++ + V++SNIYA +W +RK + + +KK+PG S IE+N
Sbjct: 548 ELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGT 607
Query: 646 VHAFSVEDRNNPNCNVIYATLEHLTANLN 674
VH F + D+++P I L + LN
Sbjct: 608 VHEFLMGDQSHPQIRRINEMLAEMRRKLN 636
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 209/424 (49%), Gaps = 28/424 (6%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR +FD+M R VVSW+TM+ S+ +FD +L L+ M+ V+ +E +++++ A
Sbjct: 178 ARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFAD 237
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVG----SGLLFFYANCFEIEEAKRVFDELHEDNELL 152
++ GK +H V+++ E +G + LL YA C + A+++F+ L + +
Sbjct: 238 TANMRMGKAMHAYVIRNSNN--EHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS 295
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
W+ M+ G ++ N + +A +F +DV++WT ++S YA++ + ++A LF MR SG
Sbjct: 296 WTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQA-NCIDQAFNLFDQMRTSG 354
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
P + T S++ CA GA GK VH + K E D + AL++ Y C + A
Sbjct: 355 VR-PTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAA 413
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVY 328
R++ + + N++I G G E+A IF + + N I++ ++ +
Sbjct: 414 GRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHA 473
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G V + K+LFEKM H ++P++E + M+ + L ++A ++
Sbjct: 474 GLVTEGKKLFEKMVH--------TFGLVPQIEH----YGCMVDLLGRAGLLDEAHEM--- 518
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
++ + I + L AC + Q G+L L++ E+ Y + ++Y+
Sbjct: 519 IKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGY-NVLMSNIYAAANR 577
Query: 449 INDA 452
+DA
Sbjct: 578 WSDA 581
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 34/227 (14%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
+TQ+T +VS I C R+ +L AR LFD R V+ W ML Y++ D++ +L
Sbjct: 288 LTQKT-VVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNL 346
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M S V+ + T ++LS+CA +L GK +H + K E + + L+ YA
Sbjct: 347 FDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAK 406
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C +I A R+F E + +W+ ++ G+ +A D+F +M ++ V
Sbjct: 407 CGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGV---------- 456
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
PN+ TF ++ AC+ G EGK
Sbjct: 457 -----------------------KPNDITFIGLLHACSHAGLVTEGK 480
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 276/518 (53%), Gaps = 27/518 (5%)
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
P ++VV WT LISG A++ ++ F RE +PN++TF +A A L
Sbjct: 19 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREG--VVPNDFTFPCAFKAVASLRLPVT 76
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
GK +H L +KCG D +G + + YC D A +++D + L N+ I+ ++
Sbjct: 77 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 136
Query: 297 MGRIEDAE---LIFNRLT-EANSISYNSMIK----------GYAVYGQVDDSKRLFEKMP 342
GR +A + F R+ NSI++ + + G ++G V S +
Sbjct: 137 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 196
Query: 343 HRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+I I E +N V+W S+++ YVQN+ EKA LY+ RK +
Sbjct: 197 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 256
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ + S + AC+ + L+ G+ +HAH VK E ++VG++LVDMY +CG I D++
Sbjct: 257 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 316
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI--VPNAATFVGVLSACVRA 512
+F + N+ +L+ GY+H G A+ LFE M + PN TFV +LSAC RA
Sbjct: 317 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 376
Query: 513 GLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
G V GMKIF SM+S YG+ P EHY+C+VD+LGR+G + A EFIK MPI+ VWGA
Sbjct: 377 GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 436
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
L +AC ++G AA+ +F LD K +V+LSN +A G+W + +R+ L + +
Sbjct: 437 LQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 496
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
KK G SWI + ++VHAF +DR++ I TL L
Sbjct: 497 KKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKL 534
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 126/539 (23%), Positives = 207/539 (38%), Gaps = 96/539 (17%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+AR + P R VVSW +++ G ++ F +L M R V N+ TF A
Sbjct: 10 SARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVA 69
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L + GKQIH L +K G FVG Y ++A+++FDE+ E N W+
Sbjct: 70 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 129
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
+ V +A + FI+ + +DG
Sbjct: 130 FISNSVTDGRPREAIEAFIEF----------------RRIDG-----------------H 156
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF------ 269
PN TF + + AC+ G +HGL+++ GF+ D S+ LI+FY C+
Sbjct: 157 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEII 216
Query: 270 -------------------------DGAMRVYDRLENPCLNASNSLINGLIS-------- 296
+ A +Y R + S+ +I+ ++S
Sbjct: 217 FTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGL 276
Query: 297 -MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
+GR A + E ++++ Y G ++DS++ F++MP
Sbjct: 277 ELGRSIHAHAV-KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP------------- 322
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS--TFSVLFHACSCLGS 413
E+N VT NS+I GY + AL L+ M T + TF L ACS G+
Sbjct: 323 ----EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 378
Query: 414 LQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
++ G + + T E + +VDM R G + A + P ++ W AL
Sbjct: 379 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 438
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
N HG +L E + + D ++ V + + AG E + +K G+
Sbjct: 439 NACRMHGKPQLGLLAAENLFKLD-PKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 496
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 5/239 (2%)
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
++ K+ H S ++ + P RN V+W S+ISG QN AL + MR+ +
Sbjct: 1 MYSKLDHPE--SARLVLRLTPA--RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVP 56
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
TF F A + L G+ +HA VK +V+VG S DMY + +DA+ F
Sbjct: 57 NDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLF 116
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
I N+ W A ++ G EA+ F D PN+ TF L+AC +N
Sbjct: 117 DEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLN 176
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
GM++ + G + ++D G+ + +E +M + +AV W +L++A
Sbjct: 177 LGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAA 234
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 35/225 (15%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T + N I G+ Q+ ++ +F +M + VSW +++ Y + + DE S++
Sbjct: 191 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE-DEKASVLYL 249
Query: 75 MHRSN-VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
R + V+ ++ S++LS CA + L G+ IH +K+ E FVGS L+ Y C
Sbjct: 250 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 309
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
IE++++ FDE MP+K++V LI GYA
Sbjct: 310 CIEDSEQAFDE-------------------------------MPEKNLVTRNSLIGGYAH 338
Query: 194 SVDGCEKALKLFRWMRESG-ENMPNEYTFDSVIRACARLGAFCEG 237
+ AL LF M G PN TF S++ AC+R GA G
Sbjct: 339 Q-GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 382
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 287/537 (53%), Gaps = 25/537 (4%)
Query: 156 MLVGYVQCNLMSDAFDVF--IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+L+ Y +C + +F P +VV WT LI+ ++S + +AL F MR +G
Sbjct: 138 LLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRS-NKPFQALTFFNRMRTTGI 196
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
PN +TF +++ ACA EG+ +H L+ K F D + AL++ Y C + A
Sbjct: 197 -YPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAE 255
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE--ANSISYNSMIKGYAVYGQV 331
V+D + + L + NS+I G + A +F + + +S +S++ A ++
Sbjct: 256 NVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVSISSVLSACAGLVEL 315
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNSMISGY 373
D K++ + R ++ L + + + +M +R+ VTWN MI G
Sbjct: 316 DFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGC 375
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
+ E+A + M + ++ +++S LFHA + + +L QG ++H+H++KT N
Sbjct: 376 FRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNS 435
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+ +SLV MY +CGS+ DA F NV WTA++ + HG +EA+ LFE ML +
Sbjct: 436 RISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNE 495
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHE 552
+VP TFV VLSAC G +++G K F SM + + + P LEHY C+VDLLGR G L E
Sbjct: 496 GVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEE 555
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A FI+ MP E D++VWGALL AC N+E+G A+++F L+ Y++LSNIY
Sbjct: 556 ACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIR 615
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
G + ++R+ + V+K+ GCSWI++ +R F+ DR++ IY L+ L
Sbjct: 616 HGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKL 672
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 212/518 (40%), Gaps = 76/518 (14%)
Query: 45 PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
P VV+W T++ S+ K ++L+ + M + + N TFS IL CA L +G+
Sbjct: 161 PSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQ 220
Query: 105 QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
QIH L+ K + FV + LL YA C + A+ VFDE+ N + W+ M+VG+V+
Sbjct: 221 QIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNK 280
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
L A VF RE P++ + SV
Sbjct: 281 LYGRAIGVF-----------------------------------REVLSLGPDQVSISSV 305
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+ ACA L GK VHG ++K G + +L++ YC C F+ A +++ + +
Sbjct: 306 LSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDV 365
Query: 285 NASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFE- 339
N +I G E A F + E + SY+S+ A + +
Sbjct: 366 VTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSH 425
Query: 340 --KMPH----RSIISLNTMISVIPEM-----------ERNPVTWNSMISGYVQNNLHEKA 382
K H R SL TM M E N V W +MI+ + Q+ +A
Sbjct: 426 VLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEA 485
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-----QLLHAHLVKTPFESNVYVGT 437
++L+ M + TF + ACS G + G + + H +K E
Sbjct: 486 IKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHY----A 541
Query: 438 SLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSE-AVLLFEIMLE 492
+VD+ R G + +A S+ P+ W AL+ H +G E A LF+ LE
Sbjct: 542 CMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFK--LE 599
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
D N ++ + + +R G++ E ++ R M GV
Sbjct: 600 PD---NPGNYMLLSNIYIRHGMLEEADEVRRLMGINGV 634
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 132/302 (43%), Gaps = 24/302 (7%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G A LF R VV+WN M+ G + F+++ + M R V+ +E ++S++
Sbjct: 348 GLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLF 407
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
A + +L G IH VLK+G+ + S L+ Y C + +A +VF E E N +
Sbjct: 408 HASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVV 467
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV----VWTKLISGYAKSVDGCEKALKLFRW 207
W+ M+ + Q ++A +F +M + VV + ++S + + + K F
Sbjct: 468 CWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHT-GKIDDGFKYFNS 526
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M P + ++ R+G E + + + FE D + GAL+ CG
Sbjct: 527 MANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESM----PFEPDSLVWGALLG-ACGK 581
Query: 267 EA-FDGAMRVYDRL-----ENPCLNASNSLI--NGLISMGRIEDAELIFNRLTEANSISY 318
A + V +RL +NP N ++ N I G +E+A+ + RL N +
Sbjct: 582 HANVEMGREVAERLFKLEPDNP----GNYMLLSNIYIRHGMLEEADEV-RRLMGINGVRK 636
Query: 319 NS 320
S
Sbjct: 637 ES 638
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP--NVAAWT 468
L SL+ +H+ LV T +++ +L+ +Y++CGSI+ F++ P NV WT
Sbjct: 110 LKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWT 169
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
L+N S +A+ F M I PN TF +L AC A L++EG +I + +
Sbjct: 170 TLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKH 229
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ T ++D+ + G + AE +MP + V W +++
Sbjct: 230 CFLNDPFVATALLDMYAKCGSMLLAENVFDEMP-HRNLVSWNSMI 273
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 204/684 (29%), Positives = 330/684 (48%), Gaps = 95/684 (13%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET-TF 87
G+ G + A +FD MP +VSWN+M+C +S+ +S L+ M L + T
Sbjct: 192 GKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTV 251
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
TIL VCA + G IH L +K G V + +++ Y+ C + EA+
Sbjct: 252 VTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQ-------- 303
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
MS F+K K+VV W +IS ++ D +A L +
Sbjct: 304 ------------------MS-----FVKNNNKNVVSWNTMISAFSLEGD-VNEAFNLLQE 339
Query: 208 MRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M+ GE M NE T +V+ AC K +HG + F+ E + A I Y C
Sbjct: 340 MQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE-LSNAFILAYAKC 398
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA------------- 313
A + A +V+ + + +++ N+LI G G A + ++T +
Sbjct: 399 GALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLL 458
Query: 314 ------NSISYNSMIKGYAVY--------------------GQVDDSKRLFEKMPHRSII 347
S+ Y I GY + G+ ++ LF++M
Sbjct: 459 LACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMK----- 513
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
++N V+WN+MISGY QN L ++L L+ I +F A
Sbjct: 514 ------------DKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGA 561
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CS L +L+ G+ H +++K + +VG S++DMY++ G I +++ F + NVA+W
Sbjct: 562 CSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASW 621
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
A++ + HG G EA+ L+E M + +P+ T++G+L AC AGLV EG+K F+ M++
Sbjct: 622 NAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQN 681
Query: 528 YGVV-PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+ ++ P LEHY C++D+L R+G L +A + +MP E D +W +LL +C + +E+GE
Sbjct: 682 FNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGE 741
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
+ A+K+ L+ YV+LSN+YA LGKW +R+ + + ++KD GCSWIE+ RV
Sbjct: 742 KVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRV 801
Query: 647 HAFSVEDRNNPNC---NVIYATLE 667
++F V D P VI+ LE
Sbjct: 802 YSFVVGDSLQPKSAEIRVIWRRLE 825
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 196/423 (46%), Gaps = 34/423 (8%)
Query: 130 ANCFEIEEAKR----VFDELHEDNELLWSLMLVG-YVQCNLMSDAFDVFIKMPKKDVVVW 184
N +IE +R V D H N+ + + L+ Y C D+ VF M K+++ W
Sbjct: 54 GNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQW 113
Query: 185 TKLISGYAKS-VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
L+SGY ++ + G +K+F + + P+ +TF SVI+AC + G+V+HG+
Sbjct: 114 NALVSGYTRNGLYG--DVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGM 171
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA 303
+IK G D +G AL+ Y C A D AM+V+D + L + NS+I G D+
Sbjct: 172 VIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDS 231
Query: 304 -ELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLF----------EKMPHRSIIS 348
+L+ L E + ++ +++ A G+VD + E M + +++
Sbjct: 232 FDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVY 291
Query: 349 L--------NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+ +S + +N V+WN+MIS + +A L M+ + +
Sbjct: 292 MYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANE 351
Query: 401 FSVLFHACSCLGSLQQGQL--LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
++L +CL LQ L LH + + F+ +V + + + Y++CG++N A+ F
Sbjct: 352 VTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHG 410
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
I V++W AL+ G++ +G +A+ L M P+ T +L AC + G
Sbjct: 411 IGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYG 470
Query: 519 MKI 521
+I
Sbjct: 471 KEI 473
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 214/481 (44%), Gaps = 69/481 (14%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
M ++ + +++E ++ N + + G L A+ F + + VVSWNTM+ +S
Sbjct: 268 MGIHGLAVKLGLSEEVMV--NNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFS 325
Query: 61 KWAKFDESLSLVSTMH--RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF 118
+E+ +L+ M +K NE T +L C +D Q+ L GY
Sbjct: 326 LEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC------LDKLQLRSLKELHGYS-- 377
Query: 119 EFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK 178
+ +CF+ E F ++ Y +C ++ A VF +
Sbjct: 378 ----------FRHCFQHVELSNAF--------------ILAYAKCGALNSAEKVFHGIGD 413
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
K V W LI G+A++ D KAL L M SG+ P+ +T S++ ACA L + GK
Sbjct: 414 KTVSSWNALIGGHAQNGDP-RKALHLLFQMTYSGQQ-PDWFTISSLLLACAHLKSLQYGK 471
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+HG +++ G E D +G +L+ Y C A ++DR+++ L + N++I+G G
Sbjct: 472 EIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNG 531
Query: 299 RIEDAELIFNR-LTEA------------NSISYNSMIK-GYAVYGQVDDSKRLFEKMPHR 344
++ +F + L+E + S S ++ G +G V + + +
Sbjct: 532 LPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGC 591
Query: 345 SIISLNTMISVIPE--------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
SII + I E ++N +WN++I + + ++A++LY M+K+
Sbjct: 592 SIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMP 651
Query: 397 TRSTFSVLFHACSCLGSLQQG-----QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
R T+ + AC G +++G ++ + +L++ E L+DM +R G ++D
Sbjct: 652 DRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHY----ACLIDMLARAGRLDD 707
Query: 452 A 452
A
Sbjct: 708 A 708
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 276/518 (53%), Gaps = 27/518 (5%)
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
P ++VV WT LISG A++ ++ F RE +PN++TF +A A L
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREG--VVPNDFTFPCAFKAVASLRLPVT 126
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
GK +H L +KCG D +G + + YC D A +++D + L N+ I+ ++
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 297 MGRIEDAE---LIFNRLT-EANSISYNSMIK----------GYAVYGQVDDSKRLFEKMP 342
GR +A + F R+ NSI++ + + G ++G V S +
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 343 HRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+I I E +N V+W S+++ YVQN+ EKA LY+ RK +
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ + S + AC+ + L+ G+ +HAH VK E ++VG++LVDMY +CG I D++
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI--VPNAATFVGVLSACVRA 512
+F + N+ +L+ GY+H G A+ LFE M + PN TFV +LSAC RA
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 513 GLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
G V GMKIF SM+S YG+ P EHY+C+VD+LGR+G + A EFIK MPI+ VWGA
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 486
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
L +AC ++G AA+ +F LD K +V+LSN +A G+W + +R+ L + +
Sbjct: 487 LQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 546
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
KK G SWI + ++VHAF +DR++ I TL L
Sbjct: 547 KKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKL 584
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 126/539 (23%), Positives = 207/539 (38%), Gaps = 96/539 (17%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+AR + P R VVSW +++ G ++ F +L M R V N+ TF A
Sbjct: 60 SARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVA 119
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L + GKQIH L +K G FVG Y ++A+++FDE+ E N W+
Sbjct: 120 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
+ V +A + FI+ + +DG
Sbjct: 180 FISNSVTDGRPREAIEAFIEF----------------RRIDG-----------------H 206
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF------ 269
PN TF + + AC+ G +HGL+++ GF+ D S+ LI+FY C+
Sbjct: 207 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEII 266
Query: 270 -------------------------DGAMRVYDRLENPCLNASNSLINGLIS-------- 296
+ A +Y R + S+ +I+ ++S
Sbjct: 267 FTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGL 326
Query: 297 -MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
+GR A + E ++++ Y G ++DS++ F++MP
Sbjct: 327 ELGRSIHAHAV-KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP------------- 372
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS--TFSVLFHACSCLGS 413
E+N VT NS+I GY + AL L+ M T + TF L ACS G+
Sbjct: 373 ----EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 414 LQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
++ G + + T E + +VDM R G + A + P ++ W AL
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
N HG +L E + + D ++ V + + AG E + +K G+
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLD-PKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 546
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 18/275 (6%)
Query: 314 NSISYNSMIKGYAVYGQVD---DSK----------RLFEKMPHRSIISLNTMISVIPEME 360
N+IS +SM G V+ ++ DS ++ K+ H S ++ + P
Sbjct: 15 NAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPE--SARLVLRLTPA-- 70
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
RN V+W S+ISG QN AL + MR+ + TF F A + L G+ +
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA VK +V+VG S DMY + +DA+ F I N+ W A ++ G
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
EA+ F D PN+ TF L+AC +N GM++ + G + +
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+D G+ + +E +M + +AV W +L++A
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAA 284
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 35/225 (15%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T + N I G+ Q+ ++ +F +M + VSW +++ Y + + DE S++
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE-DEKASVLYL 299
Query: 75 MHRSN-VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
R + V+ ++ S++LS CA + L G+ IH +K+ E FVGS L+ Y C
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 359
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
IE++++ FDE MP+K++V LI GYA
Sbjct: 360 CIEDSEQAFDE-------------------------------MPEKNLVTRNSLIGGYAH 388
Query: 194 SVDGCEKALKLFRWMRESG-ENMPNEYTFDSVIRACARLGAFCEG 237
+ AL LF M G PN TF S++ AC+R GA G
Sbjct: 389 Q-GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 202/663 (30%), Positives = 322/663 (48%), Gaps = 65/663 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR LF +P + +N ++ G+S ++ S+S + + + N L+ F+ ++ A
Sbjct: 59 ARALFFSVPKPDIFLFNVLIKGFS-FSPDASSISFYTHLLK-NTTLSPDNFTYAFAISAS 116
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ + G +H + G++ FV S L+ Y + A++VFD++ + + +LW+ M
Sbjct: 117 PDDNL-GMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTM 175
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ G V+ D+ VF KD+V + ++L
Sbjct: 176 ITGLVRNCCYDDSVQVF-----KDMVA----------------QGVRL------------ 202
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ T +V+ A A + G + L +K GF FD+ + LI + CE D A ++
Sbjct: 203 DSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLF 262
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNR-LTEANSISYNSMIKGYAV---YGQVD 332
+ P L + N+LI+G G E A F L +S ++M+ V +G +
Sbjct: 263 GMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLH 322
Query: 333 ----------DSKRLFEKMPHRSIISLNTMISVIPEM-----------ERNPVTWNSMIS 371
S + + P S +L T+ S + E+ E+ WN+MIS
Sbjct: 323 LACCIQGFCVKSGTILQ--PSVS-TALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMIS 379
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
GY Q+ L E A+ L+ M T + + AC+ LG+L G+ +H + E
Sbjct: 380 GYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQ 439
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
N+YV T+L+DMY++CG+I++A F S N W ++ GY HG G EA+ LF ML
Sbjct: 440 NIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEML 499
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHL 550
P++ TF+ VL AC AGLV EG +IF +M Y + P EHY C+VD+LGR+G L
Sbjct: 500 HLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQL 559
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
+A EFI+ MP+E VWG LL AC + + A++++F LD + YV+LSNIY
Sbjct: 560 EKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIY 619
Query: 611 AVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
+V + K +R+ + + K PGC+ IE+N H F DR++ IYA LE LT
Sbjct: 620 SVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELT 679
Query: 671 ANL 673
+
Sbjct: 680 GKM 682
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R ++ AR LFD+ +TV +WN M+ GY++ + ++SL M + N T ++
Sbjct: 352 RLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITS 411
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
ILS CAQL +L GK +H L+ E +V + L+ YA C I EA ++FD E N
Sbjct: 412 ILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKN 471
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ GY + GY ++ALKLF M
Sbjct: 472 TVTWNTMIFGYG--------------------------LHGYG------DEALKLFNEML 499
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFE 250
G P+ TF SV+ AC+ G EG ++ H ++ K E
Sbjct: 500 HLGFQ-PSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIE 540
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 173/461 (37%), Gaps = 114/461 (24%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
TAR LF + +VS+N ++ G+S + + ++ + S +++ +T ++ V +
Sbjct: 257 TARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSS 316
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L I +KSG V + L Y+ EI+ A+++FDE E W+
Sbjct: 317 PFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNA 376
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
M+ GY Q L E A+ LF+ M + E
Sbjct: 377 MISGYAQSGLT--------------------------------EMAISLFQEMMTT-EFT 403
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN T S++ ACA+LGA GK VH L+ E + + ALI+ Y C
Sbjct: 404 PNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKC--------- 454
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
G I +A +F+ +E N++++N+MI GY ++G D++
Sbjct: 455 ----------------------GNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEAL 492
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
+LF +M H L
Sbjct: 493 KLFNEMLH------------------------------------------------LGFQ 504
Query: 396 RTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ TF + +ACS G +++G ++ HA + K E +VD+ R G + A
Sbjct: 505 PSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALE 564
Query: 455 SFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+ P A W L+ H + A + E + E D
Sbjct: 565 FIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELD 605
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 64/155 (41%), Gaps = 4/155 (2%)
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA L++ ++ ++ T L G+ A+A F S+ P++ + L+ G+S
Sbjct: 28 HAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSPDA 87
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
S ++ + P+ T+ +SA L GM + G L + +
Sbjct: 88 SSISFYTHLLKNTTLSPDNFTYAFAISASPDDNL---GMCLHAHAVVDGFDSNLFVASAL 144
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
VDL + + A + MP + D V+W +++
Sbjct: 145 VDLYCKFSRVAYARKVFDKMP-DRDTVLWNTMITG 178
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 199/670 (29%), Positives = 329/670 (49%), Gaps = 59/670 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G++ A +F +MP R V SWN M+ GY K +E+L L M + ++ + TF
Sbjct: 143 RFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPC 202
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C + G+++H VL+ G+ V + L+ YA C +I A++VFD + +
Sbjct: 203 VLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTD 262
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ G+ + + CE L+LF M
Sbjct: 263 CISWNAMIAGHFENH--------------------------------ECEAGLELFLTML 290
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E+ E PN T SV A L K +HG +K GF D + +LI+ Y
Sbjct: 291 EN-EVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRM 349
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI-----KG 324
A +++ R+E + ++I+G G D L L E +++S + +
Sbjct: 350 GDAGKIFSRMETKDAMSWTAMISGYEKNG-FPDKALEVYALMELHNVSPDDVTIASALAA 408
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTW 366
A G++D +L E ++ I + + + EM E++ V+W
Sbjct: 409 CACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSW 468
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+SMI+G+ N+ +AL + M + TF AC+ G+L+ G+ +HA++++
Sbjct: 469 SSMIAGFCFNHRSFEALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLR 527
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
S YV +L+D+Y +CG + A A FS S +V +W +++G+ HGLG A+ L
Sbjct: 528 CGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSL 587
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLG 545
F M+E P+ TFV +L AC RAG+V +G ++F M + + +VP L+HY C+VDLL
Sbjct: 588 FNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLS 647
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R G L EA I MPI+ DA VWGALL+ C ++E+GE AA+ + L+ ++ +V+
Sbjct: 648 RVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVL 707
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
L ++Y GKW + +RK + +++D GCSW+E+ HAF +D ++P I
Sbjct: 708 LCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVV 767
Query: 666 LEHLTANLNS 675
L + + +
Sbjct: 768 LHGIYERMKA 777
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 205/452 (45%), Gaps = 38/452 (8%)
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
L + ML V+ + A+ VF KMP++DV W ++ GY K V E+AL L+ M +
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGK-VGFLEEALDLYYRMLWA 191
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+ YTF V+R C + + G+ VH +++ GF + + AL+ Y C
Sbjct: 192 GMR-PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAV 327
A +V+D + + N++I G E +F + E N ++ S+ +
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310
Query: 328 YGQVDDSKRLFEKMPHR----------SIISLNTMIS-------VIPEME-RNPVTWNSM 369
+V +K + R S+I + T + + ME ++ ++W +M
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
ISGY +N +KAL++Y M + T + AC+CLG L G LH F
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
V V +L++MY++ I+ A F ++ +V +W++++ G+ + EA+ F
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRY 490
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR-----SMKSYGVVPTLEHYTCVVDLL 544
ML + PN+ TF+ LSAC G + G +I + S G VP ++DL
Sbjct: 491 MLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP-----NALLDLY 544
Query: 545 GRSGHLHEA-EEFIKDMPIELDAVVWGALLSA 575
+ G A +F + E D V W +LS
Sbjct: 545 VKCGQTSYAWAQF--SVHSEKDVVSWNIMLSG 574
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 18/257 (7%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N + ++ + A +F M + VVSW++M+ G+ + E+L M
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-L 492
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+VK N TF LS CA +L GK+IH VL+ G +V + LL Y C +
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK----KDVVVWTKLISGYAK 193
A F E + + W++ML G+V L A +F +M + D V + L+ ++
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612
Query: 194 S---VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
+ + G E LF M E +PN + ++ +R+G E + L+ + +
Sbjct: 613 AGMVIQGWE----LFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEA---YNLINRMPIK 665
Query: 251 FDESIGGALIEFYCGCE 267
D ++ GAL+ GC
Sbjct: 666 PDAAVWGALLN---GCR 679
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 137/330 (41%), Gaps = 64/330 (19%)
Query: 257 GALIEFYCGCE---AFDGAMRVYDRL--ENPC--LNASNSLINGLISMGRIEDAELIFNR 309
GA + + CE A D MR R E+P L N++++ L+ G I A +F +
Sbjct: 97 GAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAK 156
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ E + S+N M+ GY G ++++ L+ +M
Sbjct: 157 MPERDVFSWNVMVGGYGKVGFLEEALDLYYRM---------------------------- 188
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
L+ MR TF + C + + G+ +HAH+++ F
Sbjct: 189 ---------------LWAGMRPDVY-----TFPCVLRTCGGIPDWRMGREVHAHVLRFGF 228
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
V V +LV MY++CG I A+ F ++ + +W A++ G+ + + LF
Sbjct: 229 GDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLT 288
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY----GVVPTLEHYTCVVDLLG 545
MLE ++ PN T + S V +G+++E + + M + G + ++ +
Sbjct: 289 MLENEVQPNLMT---ITSVTVASGMLSE-VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYT 344
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + +A + M + DA+ W A++S
Sbjct: 345 SLGRMGDAGKIFSRMETK-DAMSWTAMISG 373
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 186/576 (32%), Positives = 300/576 (52%), Gaps = 56/576 (9%)
Query: 90 ILSVCAQLNSLIDGKQIHC-LVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
I+ C L SL K IH L+++S EFV + LL Y+ + A +VFDE+ +
Sbjct: 8 IIHNCKTLKSL---KSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQP 64
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N LW+ ++ GYV+ +AF +FI+M ++ + V
Sbjct: 65 NAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLN----------------------- 101
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+T SV++A ARL F G+ V+G E D +I Y +
Sbjct: 102 ----------FTISSVLKALARLTRFKGGQAVYGFAFDEMCEKDIVSWNMMISGYGNNDR 151
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
D A + +DR+ + + S+I G + G + +A+++F+ + + S+N M+ GY
Sbjct: 152 VDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDI 211
Query: 329 GQVDDSKR-LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G + R LF++MP +N VTW++MI GY +N KAL+L+
Sbjct: 212 GDYTNGARCLFDQMPM-----------------KNLVTWSTMIGGYARNGQPLKALELFE 254
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
++ I + + ACS LG + + + + V S++ V TSL+DMY++CG
Sbjct: 255 RFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCG 314
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
SI A F ++ ++ ++ ++HGLG +A+ LF+ M +I P++ TF+GVL+
Sbjct: 315 SIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLT 374
Query: 508 ACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
AC GLV+EG K F+ M + +G+ P+ +HY CVVDLLGR G L EA I++MPI +
Sbjct: 375 ACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHS 434
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
VVWGALL+AC N+++ E AA ++F ++ Y++LSNIYA G+WG +R ++
Sbjct: 435 VVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKI 494
Query: 627 THLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
V+K+ G SWIEL+ VH F + D ++ + + I
Sbjct: 495 REHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDSI 530
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 162/356 (45%), Gaps = 38/356 (10%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
NK + R G A +FD++ W +++ GY + ++DE+ SL M R +
Sbjct: 39 NKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPIS 98
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T S++L A+L G+ ++ E + ++ Y N ++ A++
Sbjct: 99 VLNFTISSVLKALARLTRFKGGQAVYGFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKF 158
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDA---FD--------------------------- 171
FD + E N + W+ M+ GYV+ M++A FD
Sbjct: 159 FDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGA 218
Query: 172 --VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+F +MP K++V W+ +I GYA++ KAL+LF +E + P+E +I AC+
Sbjct: 219 RCLFDQMPMKNLVTWSTMIGGYARNGQPL-KALELFERFKEQ-DIKPDETFILGIISACS 276
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
+LG + + + D + +LI+ Y C + + A+++++ L ++
Sbjct: 277 QLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYST 336
Query: 290 LINGLISMGRIEDAELIFNRLTEAN----SISYNSMIKGYAVYGQVDDSKRLFEKM 341
+I L + G DA +F+++ AN S+++ ++ G VD+ ++ F++M
Sbjct: 337 MIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQM 392
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 107/263 (40%), Gaps = 45/263 (17%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK--------FD 66
E +VS I + G + A+ LFD MP++ + SWN M+ GY FD
Sbjct: 164 ERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFD 223
Query: 67 E------------------------SLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLID 102
+ +L L ++K +ET I+S C+QL +ID
Sbjct: 224 QMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQL-GIID 282
Query: 103 GKQ--IHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
+ IH V S V + L+ YA C IE+A ++F+ H + L +S M+
Sbjct: 283 AAESIIHNYVGPSLLSDLR-VFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAAL 341
Query: 161 VQCNLMSDAFDVFIKMP----KKDVVVWTKLISG--YAKSVDGCEKALKLFRWMRESGEN 214
L DA +F KM K D V + +++ + VD + K F+ M E
Sbjct: 342 ANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVD---EGRKYFKQMTEEFGI 398
Query: 215 MPNEYTFDSVIRACARLGAFCEG 237
P+E + V+ R+G E
Sbjct: 399 QPSEKHYACVVDLLGRVGCLEEA 421
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 195/665 (29%), Positives = 325/665 (48%), Gaps = 64/665 (9%)
Query: 32 GQLVTARNLFDQ-MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
G L R +FD + V WN M+ Y+K + ES+ L M + + N TFS I
Sbjct: 500 GALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCI 559
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L A L + + K+IH V K G+ + V + L+ Y E++ A ++FDEL + +
Sbjct: 560 LKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDV 619
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W+ M+ G V A + F++M V V
Sbjct: 620 VSWNSMISGCVMNGFSHSALEFFVQMLILRVGV--------------------------- 652
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+ T + + ACA +G+ G+ +HG +K F + L++ Y C +
Sbjct: 653 ------DLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLN 706
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----NRLTEANSISYNSMIKGYA 326
A++ ++++ + + SLI + G +DA +F ++ + S S++ A
Sbjct: 707 DAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACA 766
Query: 327 VYGQVDDSKRLFEKMPHRSII-------SLNTMISVIPEME-----------RNPVTWNS 368
+D + + + ++ +L M + ME ++ V+WN+
Sbjct: 767 CGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNT 826
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACSCLGSLQQGQLLHAHLV 425
MI GY +N+L +AL+L+ M+K +R T + L AC L +L+ G+ +H ++
Sbjct: 827 MIGGYSKNSLPNEALKLFAEMQK----ESRPDGITMACLLPACGSLAALEIGRGIHGCIL 882
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ + S ++V +L+DMY +CGS+ A+ F I ++ WT +++G HGLG+EA+
Sbjct: 883 RNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIA 942
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY-GVVPTLEHYTCVVDLL 544
F+ M I P+ TF +L AC +GL+NEG F SM S + P LEHY C+VDLL
Sbjct: 943 TFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLL 1002
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
R+G+L +A I+ MPI+ DA +WGALL C ++E+ E+ A+ +F L+ YV
Sbjct: 1003 ARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYV 1062
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+L+NIYA KW + +R+R+ +KK PGCSWIE+ + F D +P I++
Sbjct: 1063 LLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFS 1122
Query: 665 TLEHL 669
L +L
Sbjct: 1123 LLNNL 1127
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/547 (25%), Positives = 256/547 (46%), Gaps = 60/547 (10%)
Query: 53 NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
NT +C + + ++ L+ +S + LN +S+IL +CA+ L +GK +H ++
Sbjct: 422 NTKICKFCEVGDLRNAVELLRMSQKSELDLN--AYSSILQLCAEHKCLQEGKMVHSVISS 479
Query: 113 SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL-LWSLMLVGYVQCNLMSDAFD 171
+G +G+ L+F Y +C + E +R+FD + DN++ LW+LM+ Y + ++
Sbjct: 480 NGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIY 539
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
+F KM K + N YTF +++ A L
Sbjct: 540 LFKKMQKLGIT---------------------------------GNSYTFSCILKCFATL 566
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
G E K +HG + K GF ++ +LI Y D A +++D L + + + NS+I
Sbjct: 567 GRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMI 626
Query: 292 NGLISMGRIEDAELIFNRL----------TEANSIS----YNSMIKGYAVYGQVDDSKRL 337
+G + G A F ++ T NS++ S+ G A++GQ +
Sbjct: 627 SGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFS 686
Query: 338 FEKMPHRSII-------SLNTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
E M + +++ +LN I +M ++ V+W S+I+ YV+ L++ A++L+ M
Sbjct: 687 REVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEM 746
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+ + + + HAC+C SL +G+ +H ++ K + V +L+DMY++CGS+
Sbjct: 747 ESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSM 806
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+A FS I ++ +W ++ GYS + L +EA+ LF M +++ P+ T +L AC
Sbjct: 807 EEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-QKESRPDGITMACLLPAC 865
Query: 510 VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
+ G I + G L ++D+ + G L A + DM E D + W
Sbjct: 866 GSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHA-RLLFDMIPEKDLITW 924
Query: 570 GALLSAC 576
++S C
Sbjct: 925 TVMISGC 931
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 191/634 (30%), Positives = 314/634 (49%), Gaps = 99/634 (15%)
Query: 41 FDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSL 100
F + V++W +++ ++ + F ++L+ M S + F ++L C + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE---EAKRVFDEL--------HEDN 149
G+ +H +++ G +C + G+ L+ YA + VFDE+ ED
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ +M G + VF MP+KDVV + +I+GYA+S E AL++ R M
Sbjct: 182 KAETCIMPFG------IDSVRRVFEVMPRKDVVSYNTIIAGYAQS-GMYEDALRMVREMG 234
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+ + P+ +T SV+ + +GK +HG +I+ G + D IG +L++ Y
Sbjct: 235 TT-DLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYA----- 288
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
RIED+E +F+RL + IS+NS++ GY G
Sbjct: 289 --------------------------KSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
+ +++ RLF +M V +++ V ++S+I
Sbjct: 323 RYNEALRLFRQM-------------VTAKVKPGAVAFSSVIP------------------ 351
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
AC+ L +L G+ LH ++++ F SN+++ ++LVDMYS+CG+I
Sbjct: 352 -----------------ACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNI 394
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
A+ F ++ + +WTA++ G++ HG G EAV LFE M Q + PN FV VL+AC
Sbjct: 395 KAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Query: 510 VRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
GLV+E F SM K YG+ LEHY V DLLGR+G L EA FI M +E V
Sbjct: 455 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W LLS+C N+E+ E+ A+K+F +D + + AYV++ N+YA G+W + +R R+
Sbjct: 515 WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
++K P CSWIE+ ++ H F DR++P+ + I
Sbjct: 575 KGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKI 608
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 197/432 (45%), Gaps = 85/432 (19%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+ R +F+ MP + VVS+NT++ GY++ ++++L +V M +++K + T S++L + +
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS 253
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+ +I GK+IH V++ G + ++GS L+ YA IE+++RVF L+ + + W+
Sbjct: 254 EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNS 313
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
++ GYVQ ++ AL+LFR M + +
Sbjct: 314 LVAGYVQNGRYNE--------------------------------ALRLFRQM-VTAKVK 340
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P F SVI ACA L GK +HG +++ GF + I AL++ Y C
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC--------- 391
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
G I+ A IF+R+ + +S+ ++I G+A++G ++
Sbjct: 392 ----------------------GNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429
Query: 336 RLFEKMPHRSI-------ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE-------- 380
LFE+M + + +++ T S + ++ +NSM Y N E
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 489
Query: 381 -----KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
K + Y + K+ ++ T S +S L +CS +L+ + + A + T N+
Sbjct: 490 LGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV-AEKIFTVDSENMGA 548
Query: 436 GTSLVDMYSRCG 447
+ +MY+ G
Sbjct: 549 YVLMCNMYASNG 560
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 102/204 (50%), Gaps = 33/204 (16%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
++ ++ + +F ++ R +SWN+++ GY + +++E+L L M + VK FS
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+++ CA L +L GKQ+H VL+ G+ F+ S L+ Y+ C I+ A+++FD ++
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+E+ W+ +++G+ + G+ +A+ LF M
Sbjct: 408 DEVSWTAIIMGHA--------------------------LHGHG------HEAVSLFEEM 435
Query: 209 RESGENMPNEYTFDSVIRACARLG 232
+ G PN+ F +V+ AC+ +G
Sbjct: 436 KRQGVK-PNQVAFVAVLTACSHVG 458
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD+M + VSW ++ G++ E++SL M R VK N+ F +L
Sbjct: 392 GNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 451
Query: 92 SVCAQLNSLID 102
+ C+ + L+D
Sbjct: 452 TACSHVG-LVD 461
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 172/531 (32%), Positives = 291/531 (54%), Gaps = 25/531 (4%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A + ++ ++ ++ +I G A S + + L +++ M G +P+ YT V++AC
Sbjct: 77 ALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGI-VPDNYTIPFVLKAC 135
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A A EG+ VHG IK G D + L+ Y C+ A +V+D L +
Sbjct: 136 AESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWT 195
Query: 289 SLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
++I G + MG + +F + +A+ ++ ++ A G + ++L +
Sbjct: 196 TMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRN 255
Query: 345 SIISLNTMI------------------SVIPEME-RNPVTWNSMISGYVQNNLHEKALQL 385
S ++L+ + V EM +N V+WNSMISG Q +++L +
Sbjct: 256 SNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYM 315
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ M++L + T + ++C+ LG L+ G+ +HA+L + ++ ++G +LVDMY++
Sbjct: 316 FRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAK 375
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CGSI+ A F +++ +V ++TA++ G + HG G +A+ LF M + I P+ TFVGV
Sbjct: 376 CGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGV 435
Query: 506 LSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
L+AC GLV EG K F M + Y + P LEHY C+VDLLGR+G ++EAEEFI++MPIE
Sbjct: 436 LTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEP 495
Query: 565 DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRK 624
DA V GALL AC +E+GE +K+ ++ + AYV++SNIY+ +W + +RK
Sbjct: 496 DAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRK 555
Query: 625 RLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
+ ++K PGCS IEL+ +H F D+++P IY L+ + ++L +
Sbjct: 556 TMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLKN 606
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 188/423 (44%), Gaps = 56/423 (13%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+AR +FD P R +VSW TM+ GY K E + L M N++ + T +LS CA
Sbjct: 178 SARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCA 237
Query: 96 QLNSLIDGKQIHCLVLKSGYECFE-FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
+L L G+++H ++++ + FVG+ L+ Y C + A++VF E+ N + W+
Sbjct: 238 RLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWN 297
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN 214
M+ G Q G K ++L +FR M+ G
Sbjct: 298 SMISGLAQ--------------------------KGQFK------ESLYMFRKMQRLGVK 325
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P++ T +V+ +CA LG GK VH L + D IG AL++ Y C + D A
Sbjct: 326 -PDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACW 384
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQ 330
V+ + + + ++I GL G+ A +F+ + E + +++ ++ + G
Sbjct: 385 VFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGL 444
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
V++ ++ FE M +T+ ++ P++E + M+ + L +A + +R
Sbjct: 445 VEEGRKYFEDM--------STIYNLRPQLEH----YGCMVDLLGRAGLINEAEEF---IR 489
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSI 449
+ I+ L AC G ++ G+ + + K P + YV S ++YS
Sbjct: 490 NMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMS--NIYSSANRW 547
Query: 450 NDA 452
DA
Sbjct: 548 RDA 550
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 161/390 (41%), Gaps = 82/390 (21%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR +F +MP++ VVSWN+M+ G ++ +F ESL + M R VK ++ T +L+ CA
Sbjct: 281 ARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCAN 340
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L L GK +H + ++ F+G+ L+ YA C I++A VF ++ + ++ M
Sbjct: 341 LGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAM 400
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+VG A D+F +MPK G E P
Sbjct: 401 IVGLAMHGQGGKALDLFSEMPKM-----------------GIE----------------P 427
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+E TF V+ AC+ +G EG+ + F+ +Y
Sbjct: 428 DEVTFVGVLTACSHVGLVEEGR----------------------------KYFEDMSTIY 459
Query: 277 DRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
+ P L +++ L G I +A E I N E ++ +++ ++G+V+ +
Sbjct: 460 NL--RPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGE 517
Query: 336 RLFEKMPHRSIISLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+ +K I ++E R + M + Y N AL+L TM++ +
Sbjct: 518 SVMKK---------------IEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNL 562
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
++T S+ + Q+G H +
Sbjct: 563 EKTPGCSSIELDG--VIHEFQKGDKSHPKI 590
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 184/438 (42%), Gaps = 60/438 (13%)
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
E L + M + + T +L CA+ ++ +G+++H +K G +V + L+
Sbjct: 108 EGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLM 167
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
YA C I A++V F P++D+V WT
Sbjct: 168 RMYAVCDVIRSARKV-------------------------------FDTSPQRDLVSWTT 196
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNE-YTFDSVIRACARLGAFCEGKVVHGLLI 245
+I GY K + + + LF M GEN+ + T V+ +CARLG G+ +H +I
Sbjct: 197 MIQGYVK-MGFAREGVGLFFEM--CGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYII 253
Query: 246 K-CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
+ D +G AL++ Y C + A +V+ + + + NS+I+GL G+ +++
Sbjct: 254 RNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESL 313
Query: 305 LIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII------------- 347
+F ++ + + ++ +++ A G ++ K + + I
Sbjct: 314 YMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMY 373
Query: 348 ----SLNTMISVIPEMERNPV-TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
S++ V M R V ++ +MI G + KAL L+ M K+ I+ TF
Sbjct: 374 AKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFV 433
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS- 460
+ ACS +G +++G+ + + +VD+ R G IN+A+ ++
Sbjct: 434 GVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPI 493
Query: 461 SPNVAAWTALMNGYSHHG 478
P+ AL+ HG
Sbjct: 494 EPDAFVLGALLGACKIHG 511
>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
Length = 800
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 207/678 (30%), Positives = 332/678 (48%), Gaps = 81/678 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I + N I+ + G++ A +FD+ R VSWNTM+ G + F+ +L + +M R
Sbjct: 34 IYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNFETALEFLKSMKR 93
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ +F +IL A + + G+Q+H +++K GYE F GS LL YA
Sbjct: 94 YGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSALLDMYA------- 146
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+C + DAF+VF + ++ V W LISGYA D
Sbjct: 147 ------------------------KCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDR 182
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
A L M G + ++ TF ++ VH ++K G D ++
Sbjct: 183 G-TAFWLLDCMELEGVEI-DDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCN 240
Query: 258 ALIEFYCGCEAFDGAMRVYD-RLENPCLNASNSLINGLISMGRIEDAELIFNRLT----E 312
A+I Y C + + A RV+D +E L NS++ + + E+A +F + E
Sbjct: 241 AIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFE 300
Query: 313 ANSISYNSMI----------KGYAVYGQVDDSKRLFEKMPHRSII---------SLNTMI 353
+ +Y S+I +G +++G V F S+I S++ +
Sbjct: 301 PDIYTYTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEAL 360
Query: 354 SVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
++ +E ++ V+WNS+++G+ Q+ L E AL+ + MR + FS + +CS L
Sbjct: 361 NIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLA 420
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+LQ GQ +H CG I DA+ SF + + AW +L+
Sbjct: 421 TLQLGQQVHV----------------------LCGVIEDARKSFDATPKDSSIAWNSLIF 458
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVV 531
GY+ HG G A+ LF +M ++ + + TFV VL+AC GLV EG +SM+S YG+
Sbjct: 459 GYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIP 518
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P +EHY C++DLLGR+G L EA+ I+ MP E DA+VW LL AC ++E+ + A
Sbjct: 519 PRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASH 578
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+ L+ + YV+LS+++ L +W +K I++ + VKK PG SWIE+ + VH+F+
Sbjct: 579 LLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVHSFNA 638
Query: 652 EDRNNPNCNVIYATLEHL 669
EDR++PNC IY L L
Sbjct: 639 EDRSHPNCEEIYLRLGDL 656
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 125/524 (23%), Positives = 227/524 (43%), Gaps = 104/524 (19%)
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
HCL +KSG + + ++ YA C EI A ++FDE + + + W+ M+ G V
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNF 81
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
A + F+K K+ Y +VDG Y+F S+++
Sbjct: 82 ETALE-FLKSMKR-----------YGFAVDG---------------------YSFGSILK 108
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
A +G G+ VH +++K G+E + G AL++ Y CE + A V+ +
Sbjct: 109 GVACVGYVEVGQQVHSMIVKIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVT 168
Query: 287 SNSLINGLISMG-----------------RIED-----------------------AELI 306
N+LI+G +G I+D A+++
Sbjct: 169 WNALISGYAHVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIV 228
Query: 307 FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
+ L ++ N++I Y+ G ++D++R+F+ ++ T R+ VTW
Sbjct: 229 KHGLASDTTVC-NAIITAYSECGSIEDAERVFDG-------AIET---------RDLVTW 271
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
NSM++ Y+ NN E+A +L++ M+ L + T++ + A QG+ LH ++K
Sbjct: 272 NSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQGKSLHGLVIK 331
Query: 427 TPFESNVYVGTSLVDMY--SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
E V + SL+ MY S S+++A F S+ + + +W +++ G+S GL +A+
Sbjct: 332 RGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDAL 391
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF-------RSMKSYGVVPTLEHY 537
FE M Q +V + F VL +C + G ++ + KS+ P
Sbjct: 392 KFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLCGVIEDARKSFDATPKDSSI 451
Query: 538 TCVVDLLGRSGHLH-----EAEEFIKDMPIELDAVVWGALLSAC 576
+ G + H + +KD ++LD + + A+L+AC
Sbjct: 452 AWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTAC 495
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 71/167 (42%), Gaps = 1/167 (0%)
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
S +L + + H +K+ +++Y +++ Y++CG I A F S + +W
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWN 69
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
++ G + G A+ + M + +F +L G V G ++ +
Sbjct: 70 TMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKI 129
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + + ++D+ + + +A E K + I ++V W AL+S
Sbjct: 130 GYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIR-NSVTWNALISG 175
>gi|449433223|ref|XP_004134397.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
gi|449487596|ref|XP_004157705.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 675
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 210/679 (30%), Positives = 347/679 (51%), Gaps = 77/679 (11%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I+ C RNG + A+ LFD MP R +V+WN M+ GY + + +SL M +V
Sbjct: 50 NSEISNCMRNGLVEQAQKLFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLFRRMPERDV- 108
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE---IEEA 138
+++T++ Q + K I L+ + + +G C +EEA
Sbjct: 109 ---FSYNTVIGGLMQCGDVDGAKDIFDLMPFRDVVSWNSMIAG-------CIRNGLLEEA 158
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
++FD + N + W+L++ G V C + A + F KM ++D+V WT +ISG ++
Sbjct: 159 IQLFDGMPLKNVISWNLIIGGLVNCGKLDSAGEYFGKMSRRDLVSWTIMISGLCRA-GRL 217
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
++A LF NMP T D+ + +G GK+ E E + G
Sbjct: 218 DEARGLF-------NNMP---TKDARVWNAMMVGYIENGKI----------EMAEELFGI 257
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
+ E G + N L+NG + R++DA +F + + ++
Sbjct: 258 MPERNFG--------------------SWNKLVNGFVGSQRVDDARKLFMEMPDKCQKTW 297
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEME-RNPV 364
N+++ Y G V + L EK+P+ +I S +I + M+ ++
Sbjct: 298 NNIVLAYIRNGLVLQTHALLEKIPYGNIASWTNLIVGYFGIGEVGMAVEIFESMQYKDTT 357
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
WN+ I G +N+ E+ L+L+ M +L ++TF+ + CS L +LQ G+ HA +
Sbjct: 358 VWNATIFGLGENDKGEEGLKLFTRMIRLGPCLDKATFTSILTICSDLETLQLGRQTHALI 417
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
+K F V V ++++MY+RCG+++ A FSS+S +V +W +++ G++HHG G +A+
Sbjct: 418 LKEGFNGFVAVSNAMINMYARCGNMDCAFMEFSSMSDRDVISWNSMICGFAHHGNGEDAL 477
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY-GVVPTLEHYTCVVDL 543
+FE M +I PN TF+GVLSAC GL+++G F MK+ + P +EHYTC+VDL
Sbjct: 478 EMFEKMRLANIEPNHITFIGVLSACSHKGLIDKGRYYFNFMKNECSLRPLIEHYTCLVDL 537
Query: 544 LGRSGHLHEAEEFIKDMP---IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
GR G + EA F+ +M IE+ VWGALL AC N +VG A +K+ L+K+P
Sbjct: 538 FGRFGLIDEALSFLAEMKAEEIEVPPSVWGALLGACRIHKNYDVGVIAGEKV--LEKEPH 595
Query: 601 SA--YVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
+A Y+IL+ +Y GK I R+ + VKK PGCSWIE+N+ + F D +NP+
Sbjct: 596 NAGVYLILAEMYLRNGKRENAEKIFARMKNNGVKKQPGCSWIEVNNCGYVFLSGDCSNPH 655
Query: 659 CNVIYATLEHLTANLNSVV 677
+ I + ++ + +N ++
Sbjct: 656 FDRICSVVKLVNLEINGIL 674
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 129/560 (23%), Positives = 233/560 (41%), Gaps = 80/560 (14%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E + S N I + G + A+++FD MP R VVSWN+M+ G + +E++ L
Sbjct: 105 ERDVFSYNTVIGGLMQCGDVDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLFDG 164
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M NV +++ I+ L + + + + + SGL
Sbjct: 165 MPLKNV----ISWNLIIGGLVNCGKLDSAGEYFGKMSRRDLVSWTIMISGL----CRAGR 216
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
++EA+ +F+ + + +W+ M+VGY++ + A ++F MP+++ W KL++G+ S
Sbjct: 217 LDEARGLFNNMPTKDARVWNAMMVGYIENGKIEMAEELFGIMPERNFGSWNKLVNGFVGS 276
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ A KLF M + + T+++++ A R G + H LL K + S
Sbjct: 277 -QRVDDARKLFMEMPDKCQK-----TWNNIVLAYIRNGLVLQ---THALLEKIPYGNIAS 327
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR----- 309
++ ++ G A+ +++ ++ N+ I GL + E+ +F R
Sbjct: 328 WTNLIVGYF-GIGEVGMAVEIFESMQYKDTTVWNATIFGLGENDKGEEGLKLFTRMIRLG 386
Query: 310 --LTEANSISY--------------------------------NSMIKGYAVYGQVDDSK 335
L +A S N+MI YA G +D +
Sbjct: 387 PCLDKATFTSILTICSDLETLQLGRQTHALILKEGFNGFVAVSNAMINMYARCGNMDCAF 446
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
F M R +IS WNSMI G+ + E AL+++ MR I+
Sbjct: 447 MEFSSMSDRDVIS-----------------WNSMICGFAHHGNGEDALEMFEKMRLANIE 489
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRCGSINDAQA 454
TF + ACS G + +G+ + + + T LVD++ R G I++A +
Sbjct: 490 PNHITFIGVLSACSHKGLIDKGRYYFNFMKNECSLRPLIEHYTCLVDLFGRFGLIDEALS 549
Query: 455 SFSSISSPNV----AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
+ + + + + W AL+ H V+ E +LE++ NA ++ + +
Sbjct: 550 FLAEMKAEEIEVPPSVWGALLGACRIHKNYDVGVIAGEKVLEKE-PHNAGVYLILAEMYL 608
Query: 511 RAGLVNEGMKIFRSMKSYGV 530
R G KIF MK+ GV
Sbjct: 609 RNGKRENAEKIFARMKNNGV 628
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 126/258 (48%), Gaps = 26/258 (10%)
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
P L NS I+ + G +E A+ +F+ + + N +++N+MI+GY + G+ D LF +M
Sbjct: 44 PNLKLLNSEISNCMRNGLVEQAQKLFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLFRRM 103
Query: 342 PHRSIISLNTMISVIPEME--------------RNPVTWNSMISGYVQNNLHEKALQLYM 387
P R + S NT+I + + R+ V+WNSMI+G ++N L E+A+QL+
Sbjct: 104 PERDVFSYNTVIGGLMQCGDVDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLFD 163
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
M + +++++ G L + + S T ++ R G
Sbjct: 164 GMPL----KNVISWNLIIGGLVNCGKLDSAGEYFGKMSRRDLVS----WTIMISGLCRAG 215
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
+++A+ F+++ + + W A+M GY +G A LF IM E+ N ++ +++
Sbjct: 216 RLDEARGLFNNMPTKDARVWNAMMVGYIENGKIEMAEELFGIMPER----NFGSWNKLVN 271
Query: 508 ACVRAGLVNEGMKIFRSM 525
V + V++ K+F M
Sbjct: 272 GFVGSQRVDDARKLFMEM 289
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 88/233 (37%), Gaps = 60/233 (25%)
Query: 396 RTRSTFSV-LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
R FS+ L ++CS S + Q HA P N+ + S + R G + AQ
Sbjct: 12 RPTWIFSLYLRNSCSLTTSTCRLQASHA----PPTFPNLKLLNSEISNCMRNGLVEQAQK 67
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL-------- 506
F + N+ W A++ GY +G S+ + LF M E+D+ G++
Sbjct: 68 LFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLFRRMPERDVFSYNTVIGGLMQCGDVDGA 127
Query: 507 -------------------SACVRAGLVNEGMKIFRSMKSYGVVP--------------- 532
+ C+R GL+ E +++F M V+
Sbjct: 128 KDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLFDGMPLKNVISWNLIIGGLVNCGKLD 187
Query: 533 ------------TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
L +T ++ L R+G L EA +MP + DA VW A++
Sbjct: 188 SAGEYFGKMSRRDLVSWTIMISGLCRAGRLDEARGLFNNMPTK-DARVWNAMM 239
>gi|242063912|ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
gi|241933076|gb|EES06221.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
Length = 603
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 194/649 (29%), Positives = 310/649 (47%), Gaps = 80/649 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G++ AR +FD+M R V +WN M+ G + ++ + TM F
Sbjct: 5 RAGRVGAARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTM----------PFRN 54
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+S A LL YA C + EA+ +FD + + +
Sbjct: 55 SVSWAA-----------------------------LLTGYARCGRVAEARELFDRMPDRS 85
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ GY+ ++ A D+F MP ++ V W +ISGY K K R R
Sbjct: 86 VVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWLMMISGYMKR--------KRVREAR 137
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF------DESIGGALIEFY 263
E + P+ T C A G HG L F D A+I Y
Sbjct: 138 EIFDRAPSPTT-----SVC---NALLSGYAEHGYLKDAEDLFGRMQTPDLVSWNAMITGY 189
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIK 323
A R++D + + +++ G + G ++ A +F + + + +++N+M+
Sbjct: 190 TRAGMMQVAQRLFDEMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDMPDRDVLAWNTMMS 249
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNSM 369
G+ V ++DD+ RLF MP R ++S NT++ + E++ +WN++
Sbjct: 250 GFVVSERLDDALRLFADMPDRDLVSWNTILQGYVQQGDMDGATAWFRKMPEKDEASWNTL 309
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
ISGY E AL L M + ++T+SV CS L +L G+++H +KT F
Sbjct: 310 ISGYKD----EGALNLLSEMTQGGYRPDQATWSVAISICSSLAALGCGRMVHVCTIKTGF 365
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
E + V +SL+ MYS+CG I +A F I + W A++ Y++HGL +EA+ LF+
Sbjct: 366 ERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAEALTLFDR 425
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSG 548
M + P+ ATF+ VLSAC G + EG FRSM + + ++P +HY+C+VDLLGRSG
Sbjct: 426 MTKDGFSPDHATFLSVLSACAHKGYLYEGCHHFRSMQQDWNLIPRSDHYSCMVDLLGRSG 485
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
+H+A F + +P +L W L S+C ++++GE A+ + Y +LSN
Sbjct: 486 FVHQAYNFTRRIPSDLQINAWETLFSSCNAHGDIQLGELVAKNVLQSRPSDGGMYTLLSN 545
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
IYA G W +R + +KK+ GCSWIEL V +FS D+ +P
Sbjct: 546 IYAAKGMWSSAASVRGLMKEQGLKKETGCSWIELKGDVVSFSSNDKAHP 594
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 128/541 (23%), Positives = 222/541 (41%), Gaps = 121/541 (22%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E + + N I+ RNG L AR +FD MP R VSW +L GY++ + E+ L
Sbjct: 21 ERNVFTWNCMISGLVRNGMLTDARGVFDTMPFRNSVSWAALLTGYARCGRVAEARELFDR 80
Query: 75 M-HRSNVKLNETT----FSTILSVCAQLNSLIDGK-QIHCLVLKSGY----------ECF 118
M RS V N ++ ++ L ++ + + L++ SGY E F
Sbjct: 81 MPDRSVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWLMMISGYMKRKRVREAREIF 140
Query: 119 EFVGS-------GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
+ S LL YA +++A+ +F + + + W+ M+ GY + +M A
Sbjct: 141 DRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQTPDLVSWNAMITGYTRAGMMQVAQR 200
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
+F +MP+KD V WT ++ GY ++ D + A K+F ++MP+ R
Sbjct: 201 LFDEMPEKDTVSWTAIVRGYLQNGD-VDAAWKVF-------QDMPD--------RDVLAW 244
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
G VV E D A+R++ + + L + N+++
Sbjct: 245 NTMMSGFVV-------------------------SERLDDALRLFADMPDRDLVSWNTIL 279
Query: 292 NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD------------------- 332
G + G ++ A F ++ E + S+N++I GY G ++
Sbjct: 280 QGYVQQGDMDGATAWFRKMPEKDEASWNTLISGYKDEGALNLLSEMTQGGYRPDQATWSV 339
Query: 333 --------------------DSKRLFEK--MPHRSIISLNTMISVIPE--------MERN 362
K FE+ + S+IS+ + +I E ++R+
Sbjct: 340 AISICSSLAALGCGRMVHVCTIKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRD 399
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
VTWN+MI+ Y + L +AL L+ M K +TF + AC+ G L +G H
Sbjct: 400 TVTWNAMIATYAYHGLAAEALTLFDRMTKDGFSPDHATFLSVLSACAHKGYLYEG-CHHF 458
Query: 423 HLVKTPF----ESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWTALMNGYSHH 477
++ + S+ Y + +VD+ R G ++ A I S + AW L + + H
Sbjct: 459 RSMQQDWNLIPRSDHY--SCMVDLLGRSGFVHQAYNFTRRIPSDLQINAWETLFSSCNAH 516
Query: 478 G 478
G
Sbjct: 517 G 517
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 170/510 (33%), Positives = 288/510 (56%), Gaps = 33/510 (6%)
Query: 176 MPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAF 234
MP +D V W +I+GY K +GC +++ +LF M N +++S+I C
Sbjct: 1 MPHRDTVSWNSIITGYWK--NGCFDESKRLFGLM-----PTKNVVSWNSMIAGCIEDERI 53
Query: 235 CEG-KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
E + + + ++ I G L+ + + + A R+++ + + + ++++G
Sbjct: 54 DEAWQYFQAMPQRNTASWNAMISG-LVRY----DRVEEASRLFEEMPRRNVISYTAMVDG 108
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+G IE A +FN + + N +S+ MI GY G+ D+++ LFE+MP ++I+++ MI
Sbjct: 109 YAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMI 168
Query: 354 S----------------VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
+ IP R+ +WN+MI+GY QN E+AL+L+ M K+ +
Sbjct: 169 TGYCKEGKTDKAKILFDQIPC--RDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPD 226
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
ST + ACS L SLQ+G+ H ++K+ +ES + + +L+ MY +CGSI D++ +F
Sbjct: 227 HSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFR 286
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
I P+V +W A++ ++ HG A+ F M + P+ TF+ +LSAC AG V+E
Sbjct: 287 QIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHE 346
Query: 518 GMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+ F SM +SY +VP EH+ C+VD+L R G + +A + I++MP E D +WGALL+AC
Sbjct: 347 SLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAAC 406
Query: 577 WFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPG 636
+N+++GE AA+K+ L+ + AYV+LSNIYA G WG+ +R + VKK P
Sbjct: 407 HVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPA 466
Query: 637 CSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SW+E++++VH F +D ++P + I L
Sbjct: 467 YSWMEIDNKVHFFLGDDASHPEIHRIRLEL 496
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 218/491 (44%), Gaps = 69/491 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS N I C + ++ A F MP R SWN M+ G ++ + +E+ L M R
Sbjct: 37 VVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPR 96
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
NV +++ ++ A++ + + + + + + + SG Y + +E
Sbjct: 97 RNV----ISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISG----YVENGKFDE 148
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ +F+++ + N + + M+ GY + A +F ++P +D+ W +I+GYA++ G
Sbjct: 149 AENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSG 208
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E+ALKL M + G P+ T SV+ AC+ L + EG+ H L++K G+E SI
Sbjct: 209 -EEALKLHSQMLKMG-MQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICN 266
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
ALI YC C G I D+EL F ++ + +S
Sbjct: 267 ALITMYCKC-------------------------------GSILDSELAFRQIDHPDVVS 295
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS--GYVQ 375
+N+MI +A +G D R++ S M S +E + +T+ S++S G+
Sbjct: 296 WNAMIAAFARHGFYD-----------RALASFGEMRS--NRVEPDGITFLSLLSACGHA- 341
Query: 376 NNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
+HE +L + +M I F+ L S G +++ + + + PFE++
Sbjct: 342 GKVHE-SLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKI---IQEMPFEADCG 397
Query: 435 VGTSL-----VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ +L V + + G + A + N A+ L N Y+ G+ E + +
Sbjct: 398 IWGALLAACHVHLNVKLGEL--AAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGL 455
Query: 490 MLEQDIVPNAA 500
M EQ + A
Sbjct: 456 MREQGVKKQPA 466
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ I N IT + G ++ + F Q+ VVSWN M+ +++ +D +L+
Sbjct: 259 ESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGE 318
Query: 75 MHRSNVKLNETTFSTILSVC 94
M + V+ + TF ++LS C
Sbjct: 319 MRSNRVEPDGITFLSLLSAC 338
>gi|357511423|ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501015|gb|AES82218.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 607
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 176/511 (34%), Positives = 280/511 (54%), Gaps = 23/511 (4%)
Query: 129 YANCFEIEEAKRVFDE-LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKL 187
Y + +++A ++ DE L N + W++++ Y+Q N + D+F KMP KD V W +
Sbjct: 18 YIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIM 77
Query: 188 ISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
+SG+ ++ + E + F M +G +PN+YT +++RA + VH L
Sbjct: 78 LSGFQRTRNS-EGLYRCFLQMGRAGV-VPNDYTISTLLRAVISTELDVLVRQVHALAFHL 135
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
G + +G +LI Y G + + R ++ + + + N+L++ + +G+ DA+ F
Sbjct: 136 GHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVDAQTAF 195
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
+++ + N IS+ +++ GY QV+ ++ +F+ M ERN V+W
Sbjct: 196 DQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMS-----------------ERNVVSWT 238
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+MISGYVQN AL+L++ M K TFS + AC+ SL G LH ++K+
Sbjct: 239 AMISGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKS 298
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
++V TSLVDMY++CG ++ A F SI N+ +W A++ GY+ HGL + A+ F
Sbjct: 299 GIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEF 358
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
+ M + P+ TFV VLSACV AGLV EG K F M YG+ +EHY+C+VDL GR
Sbjct: 359 DRM-KVVGTPDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGR 417
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G EAE IK+MP E D V+WGALL+AC N+E+GE AA+++ L+ +Y +L
Sbjct: 418 AGRFDEAENLIKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVL 477
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKD-PG 636
S I G W ++R + +KK PG
Sbjct: 478 SKIQGEKGVWSSVNELRDTMKERGIKKQTPG 508
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 151/620 (24%), Positives = 269/620 (43%), Gaps = 78/620 (12%)
Query: 7 QSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
Q+ L+ + L IVS N +T ++ Q+ +LFD+MP++ VSWN ML G+ +
Sbjct: 26 QAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGFQRTR 85
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILS--VCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
+ M R+ V N+ T ST+L + +L+ L+ +Q+H L G+ FV
Sbjct: 86 NSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLV--RQVHALAFHLGHYLNVFV 143
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
GS L+ YA E E R F+++ + W+ ++ Y++ DA F +MP++++
Sbjct: 144 GSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVDAQTAFDQMPQRNI 203
Query: 182 VVWTKLISGY--------AKSV--DGCEK--------------------ALKLFRWMRES 211
+ WT L++GY A+SV D E+ ALKLF M ++
Sbjct: 204 ISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKT 263
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
E PN +TF SV+ ACA + G +H +IK G D +L++ Y C D
Sbjct: 264 -ETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDA 322
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT---EANSISYNSMIKGYAVY 328
A V++ + + L + N++I G S G A F+R+ + +++ +++
Sbjct: 323 AFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGTPDEVTFVNVLSACVHA 382
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G V++ ++ F M T + EME ++ M+ Y + ++A L
Sbjct: 383 GLVEEGEKHFTDML--------TKYGIQAEMEH----YSCMVDLYGRAGRFDEAENL--- 427
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
++ + + + L AC +L+ G+ + + ES+ V YS
Sbjct: 428 IKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRR--LESSHPVS------YSVLSK 479
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
I + +SS+ N T G G + F + D + F+ + S
Sbjct: 480 IQGEKGVWSSV---NELRDTMKERGIKKQTPGDKNCAQFSKL---DSIKTKIEFILIASN 533
Query: 509 CVRAGLV--NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
+ + N+ +K + + + + +++++ S L IK+M E D
Sbjct: 534 PFKNSPLHGNDYIKAYMCKGNLFLSYIWTYIDGILEVVATSFVL------IKNMSFEPDV 587
Query: 567 VVWGALLSACWFWMNMEVGE 586
+W ALLS C N+++GE
Sbjct: 588 PLWDALLSTCGLHSNLKLGE 607
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 312/634 (49%), Gaps = 59/634 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR--SNVKLNETTFST 89
G L +AR + D P ++ ML ++++L M R + S
Sbjct: 69 GDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAAQADVVLSL 128
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
L C + G+++HC V+K+G FV + L+ YA ++E A++VFD
Sbjct: 129 ALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKVFD------ 181
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
++P+++VV WT ++SG ++ E+ L LF MR
Sbjct: 182 -------------------------RVPERNVVSWTSMLSGSIQN-GIAEEGLVLFNEMR 215
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+ + P+EYT SV+ ACA LG +G+ +HG +IK G + I +L++ Y CE
Sbjct: 216 QDNVH-PSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKV 274
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----------NRLTEANSISYN 319
+ A RV+D LE + ++I G R DA +F N +T A IS +
Sbjct: 275 EDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISAS 334
Query: 320 SMIK----GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTWN 367
+ ++ G +V+ + + +++ + +PE ++ V WN
Sbjct: 335 AQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWN 394
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
SM++GY +N + ++L L+ MR I + AC CL L G+ H + +K
Sbjct: 395 SMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKY 454
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F SN+YV T+L+++YS+C + AQ F+ ++ N W+A++ GY G + ++ LF
Sbjct: 455 AFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLF 514
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
ML+++I PN F +LSAC G+V G + F SM + + + P+++HY C+VD++ R
Sbjct: 515 NEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMAR 574
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G+L EA EFI++MPI+ VWG+ L C +E GE A +KM L + YV++
Sbjct: 575 AGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLM 634
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWI 640
SN+Y G+W K IR+ + + K PGCS +
Sbjct: 635 SNLYTSYGRWDKSQTIRRWMQEQGLVKLPGCSSV 668
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 218/493 (44%), Gaps = 66/493 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N + + G L AR +FD++P R VVSW +ML G + +E L L + M + NV
Sbjct: 161 NSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVH 220
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+E T ++L+ CA L L G+ IH V+K G F+ + LL YA C ++E+A+RV
Sbjct: 221 PSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRV 280
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FDEL + +LW+ M+VGY Q DA +F+ KK V +
Sbjct: 281 FDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLH--KKFVSI------------------ 320
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+PN T +VI A A+L G+ VH + +K G + + AL++
Sbjct: 321 -------------VPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVD 367
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSIS 317
Y C+A A ++ R+ + A NS++ G G ++ ++FNR+ ++IS
Sbjct: 368 MYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAIS 427
Query: 318 YNSMIKGYAVYGQVDDSKRLFE---KMPHRSIISLNTMI--------------SVIPEM- 359
+ + + K K S I +NT + V +M
Sbjct: 428 VVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMT 487
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ- 418
+RN VTW++MI GY ++ L+ M K I F+ + ACS G + G+
Sbjct: 488 DRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKE 547
Query: 419 ---LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGY 474
+ H TP + +VD+ +R G++ +A ++ ++ W + ++G
Sbjct: 548 YFDSMARHFNITPSMKHY---ACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGC 604
Query: 475 SHHG---LGSEAV 484
H G EA+
Sbjct: 605 KLHSRLEFGEEAI 617
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 204/462 (44%), Gaps = 68/462 (14%)
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
+L Y ++ A V P+ D + +++ G+ A+ L R MR
Sbjct: 61 LLSCYAALGDLASARGVLDGTPRPDAYAY-RVMLGWLVDAGSHADAVALHRDMRR---RC 116
Query: 216 PNEYTFDSVI----RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P D V+ +AC R F G+ +H ++K G D + +L++ Y +
Sbjct: 117 PAAAQADVVLSLALKACVRSADFRYGRRLHCDVVKAGGA-DGFVMNSLVDMYAKAGDLEN 175
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----------------- 314
A +V+DR+ + + S+++G I G E+ ++FN + + N
Sbjct: 176 ARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAM 235
Query: 315 -----------------SISYNSMIKG-----YAVYGQVDDSKRLFEKMPHRSIISLNTM 352
+S NS I YA +V+D++R+F+++ I
Sbjct: 236 LGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDI------ 289
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
V W +MI GY QN ALQL++ + ++I T + + A + L
Sbjct: 290 -----------VLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLR 338
Query: 413 SLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
L G+ +HA VK ES+V V +LVDMY++C ++ +A + F I +V AW ++M
Sbjct: 339 HLPLGRSVHAIGVKLGTMESDV-VRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMM 397
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
GYS +G+ +E+++LF M Q I P+A + V LSACV ++ G Y +
Sbjct: 398 AGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFM 457
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ T +++L + L A+ DM + ++V W A++
Sbjct: 458 SNIYVNTALLNLYSKCADLPSAQRVFNDM-TDRNSVTWSAMI 498
>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 695
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 200/681 (29%), Positives = 349/681 (51%), Gaps = 70/681 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V K + ++G L A +LFD+MP + +V+W + + G ++ + + +++ + M
Sbjct: 27 VVHDCKRLDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVA 86
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S V N+ F+ L+ CA ++L G+Q+H L +++G+ +VGS L+ Y+ C ++
Sbjct: 87 SGVAPNDFAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGA 146
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AK VFD +M DVV +T L+S + +S +
Sbjct: 147 AKGVFD-------------------------------RMESPDVVGYTSLVSAFCRSGEF 175
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI-- 255
L + +R+ E PNE+T S++ +C F G+ VH +IK +S+
Sbjct: 176 ELAVDTLHQMLRQGVE--PNEHTMASILGSCC---PFVLGEQVHAYMIKAMGLHSQSMYA 230
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASN--SLINGLISMGRIEDAELIFNRLTEA 313
ALI+FY FD A V++ L C N S++ I GR EDA +F+ +
Sbjct: 231 SSALIDFYSRNSEFDMAKAVFNNLH--CKNVVTWCSMMQLHIRDGRPEDALQVFDDMISE 288
Query: 314 NSISYNSMIKGYAVY--GQVDDSKRLFEKMPHRSIIS----LNTMISV------IPEME- 360
+ N A+ G + ++L R++ S N ++S+ + E+E
Sbjct: 289 GVVEPNEFAFSIALGACGSIALGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQELEA 348
Query: 361 -----RNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
NP V+W + IS QN EKA+ L + + FS +C+ L
Sbjct: 349 VLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCADLAL 408
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L QG+ H +K + + G +L+++YS+CG I A+ +F + +V +W +L++G
Sbjct: 409 LDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHG 468
Query: 474 YSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS---YG 529
Y+ HG S A+ +F E+ + P+ ++F+GVL+AC AG+VNEG+ +FR++ S +G
Sbjct: 469 YAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAGMVNEGVALFRAIASHSQHG 528
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
P+ HY CVVD++GRSG +A +++MP A++W LL++C N+E GE AA
Sbjct: 529 ATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPGALIWKTLLASCRLHGNLETGELAA 588
Query: 590 QKMF----GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
+++ G + + ++YV++S I+A+ G+W +R+R+ V+K+ GCSW+E+++
Sbjct: 589 ERLMELSEGGEDRDSASYVLMSGIHAMRGEWRDAYRVRRRMDEAGVRKEAGCSWVEVHNE 648
Query: 646 VHAFSVEDRNNPNCNVIYATL 666
VH F D+++P+ IY L
Sbjct: 649 VHTFVARDKSHPDSASIYQIL 669
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 190/646 (29%), Positives = 324/646 (50%), Gaps = 60/646 (9%)
Query: 53 NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
N L SK K E+ + M ++V + ++ + C +L SL DG+ IH + +
Sbjct: 56 NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115
Query: 113 SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
+ + + LL Y +C + ++VFDE
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSCIDVQKVFDE---------------------------- 147
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
M K++V W +IS YAK+ + EKA++LF M+ SG PN + S++++C LG
Sbjct: 148 ---MLMKNLVSWVIVISAYAKNGE-LEKAIRLFSDMQASGIR-PNSAVYMSLLQSC--LG 200
Query: 233 -AFCE-GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSL 290
+F E GK +H +I+ + ++ A+ Y C +GA V+D ++ L
Sbjct: 201 PSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGL 260
Query: 291 INGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFE---KMPH 343
+ G ++E A +F R+ E + ++ ++K D +++ K+
Sbjct: 261 MVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGA 320
Query: 344 RSIISLNTMI---------------SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
S +S+ T + S E N V+W+++ISG+ Q+ E ++++ +
Sbjct: 321 ESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTS 380
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
+R + ++ +F AC+ +L G H +K S +Y +++V MYS+CG
Sbjct: 381 LRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGR 440
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
++ A+ +F SI P+ AWTA+++GY++HG +EA+ F M + PNA TF+ VL+A
Sbjct: 441 LDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTA 500
Query: 509 CVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C +GLV E + SM + YGV PT++HY C++D R+G L EA E I MP E DA+
Sbjct: 501 CSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAM 560
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
W +LL CW ++++G+ AA+ +F LD + Y++L N+Y+ GKW + +RK +
Sbjct: 561 SWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMA 620
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
E+KK+ CSWI + +VH F V DR++P IY+ LE ++
Sbjct: 621 ERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEFKCSV 666
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 202/466 (43%), Gaps = 57/466 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + + +FD+M ++ +VSW ++ Y+K + ++++ L S M S ++ N + ++L
Sbjct: 136 GSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLL 195
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C + L GKQIH V+++ V + + Y C +E AK VFD + N +
Sbjct: 196 QSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAV 255
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ++VGY Q + A ++F +M + V +
Sbjct: 256 TWTGLMVGYTQAKKLEVALELFARMAMEGVEL---------------------------- 287
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+E+ F V++ C L + G+ +H ++K G E + S+G L++FY C +
Sbjct: 288 -----DEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIES 342
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAV 327
A R + R+ P + ++LI+G GR+ED IF L NS Y S+ + A
Sbjct: 343 AYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAA 402
Query: 328 YGQVDDSKRLFEKMPHRSIIS-------LNTMISVIPEM-----------ERNPVTWNSM 369
++ + R ++S + TM S + E + V W ++
Sbjct: 403 QANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAI 462
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTP 428
ISGY + +AL + M+ + TF + ACS G + + Q L +
Sbjct: 463 ISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYG 522
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG 473
+ + ++D YSR G + +A + + P+ +W +L+ G
Sbjct: 523 VKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 189/431 (43%), Gaps = 61/431 (14%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G L A+ +FD M + V+W ++ GY++ K + +L L + M V+L+E FS
Sbjct: 235 RCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSI 294
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L VC L G+QIH ++K G E VG+ L+ FY C +IE A R F + E N
Sbjct: 295 VLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
++ WS ++ G+ Q + D +F + + VV+
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVL-------------------------- 388
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG---FEFDESIGGALIEFYCGC 266
N + + SV +ACA G HG IK G + + ES A++ Y C
Sbjct: 389 -------NSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGES---AMVTMYSKC 438
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMI 322
D A R ++ ++ P A ++I+G G +A F R+ N++++ +++
Sbjct: 439 GRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVL 498
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
+ G V ++K+ M V P ++ ++ MI Y + L ++A
Sbjct: 499 TACSHSGLVAEAKQYLGSMSRD--------YGVKPTIDH----YDCMIDTYSRAGLLQEA 546
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVD 441
L+L + ++ + ++ L C L+ G++ +L + P ++ Y+ L +
Sbjct: 547 LEL---INRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYI--LLFN 601
Query: 442 MYSRCGSINDA 452
+YS G +A
Sbjct: 602 LYSAFGKWEEA 612
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 67/166 (40%), Gaps = 34/166 (20%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
++CGR L AR F+ + V+W ++ GY+ E+L M V+ N
Sbjct: 436 SKCGR---LDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAV 492
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TF +L+ C+ + + KQ ++GS + + ++ +D
Sbjct: 493 TFIAVLTACSHSGLVAEAKQ--------------YLGS-----MSRDYGVKPTIDHYD-- 531
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISG 190
M+ Y + L+ +A ++ +MP + D + W L+ G
Sbjct: 532 ---------CMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 282/538 (52%), Gaps = 30/538 (5%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
YV+C+ + A +F +M + VV + L+ GY S + E +KLF+ M S PNEY
Sbjct: 65 YVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLE-VVKLFKNMVSSLYQ-PNEY 122
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
F +V+ ACA G EG HG L K G F + +L+ Y C D A++V +
Sbjct: 123 VFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESE 182
Query: 280 ENPCLNAS-----NSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIK------- 323
N + NS++N L+ GR+ +A + R+ + +S++Y S++
Sbjct: 183 HGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRD 242
Query: 324 ---GYAVYGQVDDSKRLFEKMPHRSIISL----NTMISVIPEME----RNPVTWNSMISG 372
G V+ Q+ F+ ++ + ++S + RN V W S+++
Sbjct: 243 LGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTA 302
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
Y+QN E+ L L M + TF+VL +A + + +L+ G LLHA + K ++
Sbjct: 303 YLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNR 362
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V VG +L++MYS+CG I+ + F + + ++ W A++ GYS HGLG +A+LLF+ ML
Sbjct: 363 VIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLS 422
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVVPTLEHYTCVVDLLGRSGHLH 551
PN TFVGVLSAC LVNEG MK + V P LEHYTCVV +L R+G L
Sbjct: 423 AGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLE 482
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
EAE F++ ++ D V W LL+AC N +G + A+ + +D + + Y +LSN+YA
Sbjct: 483 EAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYA 542
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
W IRK + VKK+PG SWIE+ + VH FS + N+P C IY ++ L
Sbjct: 543 KARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLL 600
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 126/522 (24%), Positives = 224/522 (42%), Gaps = 63/522 (12%)
Query: 3 LYATQSQTLMT-QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
L QS T + +E I+ N I + +L AR LFD+M +R+VVS+N ++ GY
Sbjct: 39 LIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLH 98
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
+ E + L M S + NE F+T+LS CA + +G Q H + K G FV
Sbjct: 99 SGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFV 158
Query: 122 GSGLLFFYANCFEIEEAKRVFDELH-----EDNELLWSLMLVGYVQCNLMSDAFDVFIKM 176
S L+ Y+ CF ++ A +V + H +++ ++ +L V+ + +A +V +M
Sbjct: 159 KSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRM 218
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
+ VVW + T+ SV+ C ++
Sbjct: 219 VDEG-VVWDSV--------------------------------TYVSVMGLCGQIRDLGL 245
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
G VH L+K G FD +G L++ + C A +V+D L+N + SL+ +
Sbjct: 246 GLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQ 305
Query: 297 MGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEK-----MPHRSII 347
G E+ + + + T +N ++ ++ +A + L + + +R I+
Sbjct: 306 NGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIV 365
Query: 348 S------------LNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+++ V +M R+ +TWN+MI GY Q+ L ++AL L+ M
Sbjct: 366 GNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGE 425
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQ 453
TF + AC+ L + +G L+K E + T +V + R G + +A+
Sbjct: 426 CPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAE 485
Query: 454 ASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+ +V AW L+N + H + + E +L+ D
Sbjct: 486 NFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMD 527
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
E N+ SL+++Y +C + A+ F +S +V ++ LM GY H G E V LF+
Sbjct: 52 EFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKN 111
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
M+ PN F VLSAC +G V EGM+ + +G+V
Sbjct: 112 MVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLV 153
>gi|449454362|ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 198/657 (30%), Positives = 332/657 (50%), Gaps = 89/657 (13%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S NK I+ R G++ AR LFD ++WN M+ Y K + ++ L M +
Sbjct: 59 SLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRD 118
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ + ++ SGY + G F +E A+
Sbjct: 119 I-------------------------VSWNLMLSGY-----ISCGGKF-------VERAR 141
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+FD++ E + + W+ ML GY + +M A ++F +MP+++VV W ++SGY + E
Sbjct: 142 NMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMPERNVVSWNAMVSGYLMN-GHVE 200
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG---FEFDESIG 256
KA++ F+ M + R A L A G + + L++ ++ ++G
Sbjct: 201 KAIEFFKLMPK---------------RDSASLRALISGLIQNDKLVEAERILLQYGGNVG 245
Query: 257 -GALIEFYCGCEAFDG-------AMRVYDRLENPC--------LNASNSLINGLISMGRI 300
G L++ Y A G A +++DR+ C + + NS+I + G I
Sbjct: 246 KGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDI 305
Query: 301 EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM- 359
A +F+++ E ++ S+N+MI GY + ++ LF +MP +S N MIS E+
Sbjct: 306 VSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIG 365
Query: 360 -------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
E++ V+WNSMISGY +N ++ A+ +++ M+ R T S +
Sbjct: 366 SLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILS 425
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVA 465
AC+ L L G +H LV F +++ + SLV MYSRCG+I +A+ F ++ +V
Sbjct: 426 ACAGLVDLVLGTQIH-QLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVI 484
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
+W A++ GY++HG +EA+ LF++M + ++ P+ TF+ VL+AC AGL+ EG + F SM
Sbjct: 485 SWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSM 544
Query: 526 -KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
++G+ P +EHY +VD++GR G L EA I MP E D VWGALL AC N+E+
Sbjct: 545 VNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVEM 604
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
AA+ + L + + YV+L N+YA +G+W ++R + V+KD G S ++
Sbjct: 605 ARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSRVD 661
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 204/462 (44%), Gaps = 73/462 (15%)
Query: 17 LIVSTNKAITECGRNGQLVTARNLFDQMPI--------RTVVSWNTMLCGYSKWAKFDES 68
L+ + N I G+ G AR LFD++P+ R V+SWN+M+ Y + +
Sbjct: 249 LVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSA 308
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
L M + TFS N++I G
Sbjct: 309 RELFDKM------VERDTFS--------WNTMISG------------------------- 329
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
Y +++EA +F + E + L W++M+ G+ + + A D+F ++P+K +V W +I
Sbjct: 330 YVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMI 389
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
SGY K+ D + A+ +F M+ G+ P+ +T S++ ACA L G +H L+ K
Sbjct: 390 SGYEKNED-YKGAMNIFLQMQLEGKK-PDRHTLSSILSACAGLVDLVLGTQIHQLVTK-A 446
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIF 307
F D I +L+ Y C A A V+D + + + N++I G G +A +F
Sbjct: 447 FIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLF 506
Query: 308 NRLTEAN----SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP 363
+ + + N I++ S++ A G +++ +R F M +NT + P++E
Sbjct: 507 DLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSM-------VNTH-GIKPQVEH-- 556
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
+ +++ ++ E+A+ L +M + ++ + L AC +++ +
Sbjct: 557 --YAALVDIIGRHGQLEEAMSLINSM---PCEPDKAVWGALLGACKVHNNVEMARAAAEA 611
Query: 424 LVK-TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
L+K P S YV L +MY+ G +DA + + NV
Sbjct: 612 LMKLQPESSAPYV--LLHNMYADVGRWDDAAEMRTMMEKNNV 651
>gi|125560040|gb|EAZ05488.1| hypothetical protein OsI_27705 [Oryza sativa Indica Group]
Length = 1165
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 204/651 (31%), Positives = 319/651 (49%), Gaps = 57/651 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T GR G+L A+ LFDQMP R V+SW +L Y+ + + M R N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 82 ---------------------------LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG 114
N ++ I+S A+ L + + ++ +
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVY---EEMP 158
Query: 115 YECFEFVGS-GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
++ + VGS L+ Y E+ A RVF+ + + + WS M+ G + +S+A VF
Sbjct: 159 WQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVF 218
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
MP+++VV WT +I GY K C L LF MR G + N T + ACA
Sbjct: 219 DAMPERNVVSWTSMIRGYVKR-GMCRDGLLLFLNMRREGVQV-NTTTLSVALDACAAASL 276
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
EG +H L+I GFE D +G ++I Y A R +D ++ + + NSLI G
Sbjct: 277 AREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGCMVDAKRAFDCMQQKDIVSWNSLITG 336
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+ +E+A ++F + + +++S+ SM+ G+A G + +S LFE+MP
Sbjct: 337 YVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMP----------- 385
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
++ V W ++IS ++ N + A++ + M + FS L A + L
Sbjct: 386 ------VKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAM 439
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L QG+ HA+ + + + V TSLV MY++CG + +A FSSIS+P++ A +++
Sbjct: 440 LNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITA 499
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVP 532
+ HG +A+ LF M PN TF+G+L+ C RAG V +G F SM+ YGV P
Sbjct: 500 FVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEP 559
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
EHYTC+VDLLGR+G L EA E I MP + W ALLSA N+ + AAQK+
Sbjct: 560 NPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKL 619
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELN 643
D +AY +LS +++ G ++M +L++L + SW +LN
Sbjct: 620 LEKDPYDATAYTVLSRMFSSAGMEDEEMLKVVQLSNLAM------SWKKLN 664
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 214/464 (46%), Gaps = 51/464 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S + + ++G + AR +FD MP R VVSW +M+ GY K + L L M R
Sbjct: 195 VISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRR 254
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V++N TT S L CA + +G QIH L++ G+E F+G ++ Y+ + +
Sbjct: 255 EGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGCMVD 314
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA----- 192
AKR FD + + + + W+ ++ GYVQ +++ +A +F M +KD V WT ++ G+A
Sbjct: 315 AKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWM 374
Query: 193 -KSVDGCEKA---------------------LKLFRWM-RESGEN-MPNEYTFDSVIRAC 228
+SV+ E+ L RW R S E PN F ++ A
Sbjct: 375 RESVELFEQMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSAL 434
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A L +G+ H I G+ FD ++ +L+ Y C A V+ + NP L A N
Sbjct: 435 ASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAIN 494
Query: 289 SLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
S+I + G +EDA +F ++ A N +++ ++ G A G V FE M R
Sbjct: 495 SMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESM--R 552
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+ + E NP + M+ + L +AL++ +M + + ++ L
Sbjct: 553 PVYGV----------EPNPEHYTCMVDLLGRAGLLAEALEMINSMPQ---NDHSDAWAAL 599
Query: 405 FHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRCG 447
A S +L ++ L+ K P+++ Y T L M+S G
Sbjct: 600 LSASSLHSNLAFAKIAAQKLLEKDPYDATAY--TVLSRMFSSAG 641
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 100/259 (38%), Gaps = 36/259 (13%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
Q+ IVS N IT ++ + A LF M + VSW +M+ G++ ES+ L
Sbjct: 323 QQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFE 382
Query: 74 T-------------------------------MHRSNVKLNETTFSTILSVCAQLNSLID 102
M + K N FS +LS A L L
Sbjct: 383 QMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQ 442
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
G+Q H + G+ V + L+ YA C + EA VF + + + + M+ +VQ
Sbjct: 443 GRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQ 502
Query: 163 CNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
+ DA +F KM K + V + +++G A++ ++ F MR PN
Sbjct: 503 HGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARA-GFVQQGYNYFESMRPVYGVEPNP 561
Query: 219 YTFDSVIRACARLGAFCEG 237
+ ++ R G E
Sbjct: 562 EHYTCMVDLLGRAGLLAEA 580
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 291/518 (56%), Gaps = 33/518 (6%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRA 227
A VF +MP +D V W +I+GY K +GC +++ +LF M N +++S+I
Sbjct: 66 ARQVFDEMPHRDTVSWNSIITGYWK--NGCFDESKRLFGLM-----PTKNVVSWNSMIAG 118
Query: 228 CARLGAFCEG-KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
C E + + + ++ I G L+ + + + A R+++ + + +
Sbjct: 119 CIEDERIDEAWQYFQAMPQRNTASWNAMISG-LVRY----DRVEEASRLFEEMPRRNVIS 173
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
++++G +G IE A +FN + + N +S+ MI GY G+ D+++ LFE+MP ++I
Sbjct: 174 YTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNI 233
Query: 347 ISLNTMIS----------------VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+++ MI+ IP R+ +WN+MI+GY QN E+AL+L+ M
Sbjct: 234 VAMTAMITGYCKEGKTDKAKILFDQIPC--RDLASWNAMITGYAQNGSGEEALKLHSQML 291
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
K+ + ST + ACS L SLQ+G+ H ++K+ +ES + + +L+ MY +CGSI
Sbjct: 292 KMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSIL 351
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
D++ +F I P+V +W A++ ++ HG A+ F M + P+ TF+ +LSAC
Sbjct: 352 DSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACG 411
Query: 511 RAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
AG V+E + F SM SY +V EH+ C+VD+L R G + +A + I++MP E D +W
Sbjct: 412 HAGKVHESLNWFNSMIXSYKIVXRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIW 471
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
GALL+AC +N+++GE AA+K+ L+ + AYV+LSNIYA G WG+ +R +
Sbjct: 472 GALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQ 531
Query: 630 EVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
VKK P SW+E++++VH F +D ++P + I L+
Sbjct: 532 GVKKQPAYSWMEIDNKVHFFLGDDASHPEIHRIRLELK 569
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 132/566 (23%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+KL++TQ + + N I R G + AR +FD+MP R VSWN+++ GY
Sbjct: 39 IKLFSTQD---------VYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYW 89
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
K FDES L M NV +++++++ C + + + Q + + +
Sbjct: 90 KNGCFDESKRLFGLMPTKNV----VSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNA 145
Query: 121 VGSGLLFF---------------------------YANCFEIEEAKRVFDELHEDNELLW 153
+ SGL+ + YA EIE+A+ +F+ + + N + W
Sbjct: 146 MISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSW 205
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVV------------------------------ 183
++M+ GYV+ +A ++F +MP K++V
Sbjct: 206 TVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLA 265
Query: 184 -WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W +I+GYA++ G E+ALKL M + G P+ T SV+ AC+ L + EG+ H
Sbjct: 266 SWNAMITGYAQNGSG-EEALKLHSQMLKMG-MQPDHSTLISVLTACSSLASLQEGRKTHV 323
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
L++K G+E SI ALI YC C G I D
Sbjct: 324 LVLKSGYESRISICNALITMYCKC-------------------------------GSILD 352
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
+EL F ++ + +S+N+MI +A +G D R++ S M S +E +
Sbjct: 353 SELAFRQIDHPDVVSWNAMIAAFARHGFYD-----------RALASFGEMRS--NRVEPD 399
Query: 363 PVTWNSMIS--GYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
+T+ S++S G+ +HE +L + +M I F+ L S G +++
Sbjct: 400 GITFLSLLSACGHA-GKVHE-SLNWFNSMIXSYKIVXRPEHFACLVDILSRGGQVEKAYK 457
Query: 420 LHAHLVKTPFESNVYVGTSL-----VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ + + PFE++ + +L V + + G + A + N A+ L N Y
Sbjct: 458 I---IQEMPFEADCGIWGALLAACHVHLNVKLGEL--AAKKIVELEPQNSGAYVVLSNIY 512
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAA 500
+ G+ E + +M EQ + A
Sbjct: 513 AAAGMWGEVTRVRGLMREQGVKKQPA 538
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 157/329 (47%), Gaps = 42/329 (12%)
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
A N I L G I A +F+ + +++S+NS+I GY G D+SKRLF MP ++
Sbjct: 49 AFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKN 108
Query: 346 IISLNTMISVIPEME--------------RNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
++S N+MI+ E E RN +WN+MISG V+ + E+A +L+ M +
Sbjct: 109 VVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPR 168
Query: 392 L----------------AIDRTRSTF------SVLFHACSCLGSLQQGQLLHA-HLVKTP 428
I++ R+ F +V+ G ++ G+ A +L +
Sbjct: 169 RNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQM 228
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
+ N+ T+++ Y + G + A+ F I ++A+W A++ GY+ +G G EA+ L
Sbjct: 229 PDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHS 288
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548
ML+ + P+ +T + VL+AC + EG K + G + ++ + + G
Sbjct: 289 QMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCG 348
Query: 549 HLHEAEEFIK--DMPIELDAVVWGALLSA 575
+ ++E + D P D V W A+++A
Sbjct: 349 SILDSELAFRQIDHP---DVVSWNAMIAA 374
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 81/204 (39%), Gaps = 40/204 (19%)
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
R+ F +FH+ + + H +K +VY + +R G+I A+ F
Sbjct: 20 RTIFLPIFHSFN--------RQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQVFD 71
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP-------------------- 497
+ + +W +++ GY +G E+ LF +M +++V
Sbjct: 72 EMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQY 131
Query: 498 -------NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
N A++ ++S VR V E ++F M V+ YT +VD + G +
Sbjct: 132 FQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVIS----YTAMVDGYAKIGEI 187
Query: 551 HEAEEFIKDMPIELDAVVWGALLS 574
+A MP + + V W ++S
Sbjct: 188 EQARALFNCMP-QKNVVSWTVMIS 210
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 195/660 (29%), Positives = 321/660 (48%), Gaps = 116/660 (17%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
+ N +T + G++ A+ LFD + +VSWNT++ S+ +F+E+L + M +S
Sbjct: 223 TNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSG 282
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE--FVGSGLLFFYANCFEIEE 137
V+ N T +++L C+ L L GK+IH VL + + E FVG L+ Y NC + E+
Sbjct: 283 VRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNN-DLIENSFVGCALVDMYCNCKQPEK 341
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+ VFD + +W+ M+ GYV+ +A ++F++M V+ +S
Sbjct: 342 GRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEM------VFELGLS-------- 387
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
PN T SV+ AC R +F + + +H ++K GFE D+ +
Sbjct: 388 ------------------PNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQN 429
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL++ Y MGRIE A IF + + +S
Sbjct: 430 ALMDMYS-------------------------------RMGRIEIARSIFGSMNRKDIVS 458
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+N+MI GY V G+ DD+ ++++ +M+R G ++
Sbjct: 459 WNTMITGYVVCGRHDDA------------------LNLLHDMQR----------GQAEHR 490
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
++ Y + + T + C+ L +L +G+ +HA+ VK +V VG+
Sbjct: 491 IN--TFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGS 548
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ---- 493
+LVDMY++CG +N ++ F +S NV W L+ Y HG G EA+ LF M+E+
Sbjct: 549 ALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNN 608
Query: 494 -DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLH 551
+I PN T++ + ++ +G+V+EG+ +F +MK+ +G+ PT +HY C+VDLLGRSG +
Sbjct: 609 REIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIE 668
Query: 552 EAEEFIKDMPIELDAV-VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
EA IK MP + V W +LL AC N+E+GE AA+ +F LD
Sbjct: 669 EAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPN------------ 716
Query: 611 AVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
VL K+ + +++ V+K+PGCSWIE VH F D ++P ++ LE L+
Sbjct: 717 -VLDYGTKQSMLGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLS 775
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 135/567 (23%), Positives = 234/567 (41%), Gaps = 100/567 (17%)
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
+ F +++S + M + V + F +L A + L GKQ+H V K G V
Sbjct: 64 STFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVP 123
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ L+ Y C +I+ A+RVFDE+ +D V
Sbjct: 124 NSLVNMYGKCGDIDAARRVFDEI-------------------------------TNRDDV 152
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARL-GAFCEGKVV 240
W +I+ + + E A+ LFR M EN+ P +T SV AC+ L GK V
Sbjct: 153 SWNSMINAACR-FEEWELAVHLFRLMLL--ENVGPTSFTLVSVAHACSNLINGLLLGKQV 209
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
H +++ G ++ AL+ Y A ++D ++ L + N++I+ L R
Sbjct: 210 HAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRF 268
Query: 301 EDAELIFNRLTEA----NSISYNSMIK----------GYAVYGQVDDSKRLFE------- 339
E+A L + + ++ N ++ S++ G ++ V + L E
Sbjct: 269 EEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCA 328
Query: 340 --------KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR- 390
K P + + + M R WN+MI+GYV+N +A++L++ M
Sbjct: 329 LVDMYCNCKQPEKGRLVFDGMF------RRTIAVWNAMIAGYVRNEFDYEAIELFVEMVF 382
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+L + T S + AC S + +H+ +VK FE + YV +L+DMYSR G I
Sbjct: 383 ELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIE 442
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD---------------- 494
A++ F S++ ++ +W ++ GY G +A+ L M
Sbjct: 443 IARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKN 502
Query: 495 --IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSG 548
+ PN+ T + VL C + +G +I +Y V L V VD+ + G
Sbjct: 503 FPLKPNSVTLMTVLPGCAALAALGKGKEI----HAYAVKQMLSKDVAVGSALVDMYAKCG 558
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSA 575
L+ + + M + + + W L+ A
Sbjct: 559 CLNLSRTVFEQMSVR-NVITWNVLIMA 584
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 178/436 (40%), Gaps = 66/436 (15%)
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
W + +S +A+ + M +G P+ + F +V++A A + GK +H
Sbjct: 52 WVSHLRSQTQSSSTFHQAISTYTNMVTAGVP-PDNFAFPAVLKATAGIQDLNLGKQLHAH 110
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN---------------------- 281
+ K G ++ +L+ Y C D A RV+D + N
Sbjct: 111 VFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELA 170
Query: 282 --------------------PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
+A ++LINGL+ +G+ A ++ N + + + N++
Sbjct: 171 VHLFRLMLLENVGPTSFTLVSVAHACSNLINGLL-LGKQVHAFVLRN--GDWRTFTNNAL 227
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK 381
+ YA G+V ++K LF+ + ++S WN++IS QN+ E+
Sbjct: 228 VTMYAKLGRVYEAKTLFDVFDDKDLVS-----------------WNTIISSLSQNDRFEE 270
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH-LVKTPFESNVYVGTSLV 440
AL M + + T + + ACS L L G+ +HA L+ N +VG +LV
Sbjct: 271 ALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALV 330
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNA 499
DMY C + F + +A W A++ GY + EA+ LF E++ E + PN+
Sbjct: 331 DMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNS 390
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
T VL ACVR + I + +G ++D+ R G + A
Sbjct: 391 VTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGS 450
Query: 560 MPIELDAVVWGALLSA 575
M + D V W +++
Sbjct: 451 MNRK-DIVSWNTMITG 465
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 10/220 (4%)
Query: 361 RNPVTWNSMISGYVQNN-LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
R P W S + Q++ +A+ Y M + F + A + + L G+
Sbjct: 47 RLPSEWVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQ 106
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
LHAH+ K V SLV+MY +CG I+ A+ F I++ + +W +++N
Sbjct: 107 LHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEE 166
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY----GVVPTLE 535
AV LF +ML +++ P + T V V AC + L+N G+ + + + ++ G T
Sbjct: 167 WELAVHLFRLMLLENVGPTSFTLVSVAHAC--SNLIN-GLLLGKQVHAFVLRNGDWRTFT 223
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ +V + + G ++EA+ D+ + D V W ++S+
Sbjct: 224 N-NALVTMYAKLGRVYEAKTLF-DVFDDKDLVSWNTIISS 261
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 195/671 (29%), Positives = 336/671 (50%), Gaps = 69/671 (10%)
Query: 36 TARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET-TFSTILSV 93
+AR +F+ + IR+ V WN+++ GYSK + F ++L + + + + ++ T+ ++
Sbjct: 56 SARLVFENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKA 115
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
L G+ IH +V+KSG+ C V S L+ YA
Sbjct: 116 YGALGREFLGRMIHTVVVKSGHVCDVVVASSLVGMYA----------------------- 152
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ NL D+ VF +MP++DV W +IS + + D EKAL+LF M E +
Sbjct: 153 --------KFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDA-EKALELFGRM-ERSD 202
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
PN + I AC+RL GK +H +K FE DE + AL++ Y C+ + A
Sbjct: 203 FEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAR 262
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-------------------TEAN 314
V+ ++ L A NS+I G ++ G + + NR+ + +
Sbjct: 263 EVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSR 322
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL-------NTMISVIPEMERNPV-TW 366
++ + + GY + VD + + S+I L +V + +++ V +W
Sbjct: 323 NLLHGKFVHGYVIRSVVDADIYI-----NCSLIDLYFKCGEVKLAETVFLKTQKDVVESW 377
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N MISGYV KA+ +Y M + + TF+ + CS L +L++G+ +H + +
Sbjct: 378 NVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISE 437
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ E++ + ++L+DMYS+CG++ +A F+SI +V +WT +++ Y HG EA+
Sbjct: 438 SRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYH 497
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLG 545
F+ M + + P+ TF+ VLSAC AGL++EG+K F M+S YG+ ++E Y+C++D+LG
Sbjct: 498 FDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILG 557
Query: 546 RSGHLHEAEEFIKDMPIELD-AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
R+G L EA ++ P D A + L AC + +G A+ + S Y
Sbjct: 558 RAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDHLLGYTIAKLLVEKYPDDASTYT 617
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+L N+YA W +R ++ + ++K PGCSWIE+N +V F EDR++P +Y
Sbjct: 618 VLFNLYASGESWDAAKRVRLKMKEVGMRKKPGCSWIEMNEKVCHFFAEDRSHPQAENVYE 677
Query: 665 TLEHLTANLNS 675
L L+ ++ +
Sbjct: 678 CLALLSGHMEA 688
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 220/457 (48%), Gaps = 32/457 (7%)
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVDGCEKALK 203
L D L SL+ V Y C A VF + + DV +W L+SGY+K+ LK
Sbjct: 34 LRSDVVLCKSLINV-YFACKDHCSARLVFENIDIRSDVYIWNSLVSGYSKN-SMFHDTLK 91
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
+F+ + +P+ +T+ +VI+A LG G+++H +++K G D + +L+ Y
Sbjct: 92 VFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMIHTVVVKSGHVCDVVVASSLVGMY 151
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYN 319
F+ +++V+D + + + N++I+ G E A +F R+ E NS+S
Sbjct: 152 AKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSIT 211
Query: 320 SMI----------KGYAVYGQVDDSKRLFEKMPHRSIIS-------LNTMISVIPEMERN 362
I +G ++ + + ++ + +++ L V +M R
Sbjct: 212 VAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRK 271
Query: 363 P-VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR---STFSVLFHACSCLGSLQQGQ 418
V WNSMI GYV + ++L + ++ I+ TR +T + + ACS +L G+
Sbjct: 272 SLVAWNSMIRGYVARGDSKSCVEL---LNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 328
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H +++++ ++++Y+ SL+D+Y +CG + A+ F V +W +++GY G
Sbjct: 329 FVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVG 388
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
+AV +++ M+ + P+ TF VLS C + + +G +I S+ + +
Sbjct: 389 NWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLS 448
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++D+ + G++ EA +P + D V W ++SA
Sbjct: 449 ALLDMYSKCGNVKEASRIFNSIP-KKDVVSWTVMISA 484
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 170/390 (43%), Gaps = 40/390 (10%)
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE-N 281
S++R C + + K+VH ++ G D + +LI Y C+ A V++ ++
Sbjct: 8 SLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIR 67
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTE-----ANSISYNSMIKGYAVYGQVDDSKR 336
+ NSL++G D +F RL +S +Y ++IK Y G +
Sbjct: 68 SDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALG-----RE 122
Query: 337 LFEKMPHRSII------------SLNTM----------ISVIPEM-ERNPVTWNSMISGY 373
+M H ++ SL M + V EM ER+ +WN++IS +
Sbjct: 123 FLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSF 182
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
Q EKAL+L+ M + + + +V ACS L L++G+ +H +K FE +
Sbjct: 183 YQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDE 242
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
YV ++LVDMY RC + A+ F + ++ AW +++ GY G V L M+ +
Sbjct: 243 YVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIE 302
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC-VVDLLGRSGHLHE 552
P+ T +L AC R+ + G K VV + C ++DL + G +
Sbjct: 303 GTRPSQTTLTSILMACSRSRNLLHG-KFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKL 361
Query: 553 AEEFI----KDMPIELDAVVWGALLSACWF 578
AE KD+ + ++ G + WF
Sbjct: 362 AETVFLKTQKDVVESWNVMISGYVSVGNWF 391
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 170/396 (42%), Gaps = 83/396 (20%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
GR L AR +F QM +++V+WN+M+ GY + L++ M + ++TT +
Sbjct: 253 GRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLT 312
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+IL C++ +L+ GK +H V++S + ++ L+ Y C E++ A+ VF + +D
Sbjct: 313 SILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKD 372
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
W++M+ GYV A DV+ +M V
Sbjct: 373 VVESWNVMISGYVSVGNWFKAVDVYDQMVSVGV--------------------------- 405
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
P+ TF SV+ C++L A +GK +H + + E DE + AL++ Y C
Sbjct: 406 ------QPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC-- 457
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
G +++A IFN + + + +S+ MI Y +
Sbjct: 458 -----------------------------GNVKEASRIFNSIPKKDVVSWTVMISAYGSH 488
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
GQ ++ F++M V P + VT+ +++S L ++ ++ +
Sbjct: 489 GQPREALYHFDEMQK---------FGVKP----DGVTFLAVLSACGHAGLIDEGVKYFSQ 535
Query: 389 MR-KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
MR K I+ + +S L LG + G+LL A+
Sbjct: 536 MRSKYGIEASIEQYSCLI---DILG--RAGRLLEAY 566
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 264/458 (57%), Gaps = 23/458 (5%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGAM 273
P+EYTF SV++ACA L EG+ VH + K G E + + +L++ Y GC A
Sbjct: 125 PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCI--AQ 182
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
+++D + + + N+LI+G G ++ A ++F+ + E N +S+++MI GYA G +++
Sbjct: 183 KLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEE 242
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR-KL 392
+++LFE MP R+++S WN+MI+GY QN + A++L+ M+ +
Sbjct: 243 ARQLFENMPMRNVVS-----------------WNAMIAGYAQNEKYADAIELFRQMQHEG 285
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ T + AC+ LG+L G+ +H + + E +++G +L DMY++CG + +A
Sbjct: 286 GLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEA 345
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ F + +V +W+ ++ G + +G +EA F M+E + PN +F+G+L+AC A
Sbjct: 346 KGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHA 405
Query: 513 GLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GLV++G++ F M YG+ P +EHY CVVDLL R+G L +AE I MP++ + +VWGA
Sbjct: 406 GLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGA 465
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
LL C + + E GER ++ LD + V L+N+YA +G+ R R+ +
Sbjct: 466 LLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKS 525
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
K PGCSWIE+N+ V+ F + D ++P IY+ + L
Sbjct: 526 MKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIREL 563
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 182/423 (43%), Gaps = 111/423 (26%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY------------- 129
+E TF+++L CA L +++G+++HC V K G E FV + L+ Y
Sbjct: 126 DEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLF 185
Query: 130 ----------------ANCFE--IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
CF +++A+ VFD + E N + WS M+ GY + + +A
Sbjct: 186 DEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQ 245
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
+F MP ++VV W +I+GYA++ + A++LFR M+ G PN+ T SV+ ACA L
Sbjct: 246 LFENMPMRNVVSWNAMIAGYAQN-EKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHL 304
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
GA GK +H + + E +G AL + Y C
Sbjct: 305 GALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKC------------------------- 339
Query: 292 NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
G + +A+ +F+ + E + IS++ +I G A+YG +++ F +M
Sbjct: 340 ------GCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEM---------- 383
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
+ +E N +++ +++ L +K L+ + M ++ T + + C
Sbjct: 384 ---IEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQV----YGITPKIEHYGC--- 433
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTAL 470
+VD+ SR G ++ A++ +S+ PNV W AL
Sbjct: 434 ---------------------------VVDLLSRAGRLDQAESLINSMPMQPNVIVWGAL 466
Query: 471 MNG 473
+ G
Sbjct: 467 LGG 469
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 147/325 (45%), Gaps = 65/325 (20%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS + I+ R G L AR LF+ MP+R VVSWN M+ GY++ K+ +++ L
Sbjct: 221 EKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQ 280
Query: 75 M-HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M H + N+ T ++LS CA L +L GK IH + ++ E F+G+ L YA C
Sbjct: 281 MQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCG 340
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+ EAK VF E+HE + + WS++++G ++AF+ F +M +
Sbjct: 341 CVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIE--------------- 385
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
DG E PN+ +F ++ AC H L+ G E+
Sbjct: 386 --DGLE----------------PNDISFMGLLTAC-----------THAGLVDKGLEY-- 414
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-E 312
FD +VY P + +++ L GR++ AE + N + +
Sbjct: 415 ---------------FDMMPQVYGI--TPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQ 457
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRL 337
N I + +++ G +Y + +R+
Sbjct: 458 PNVIVWGALLGGCRIYKDAERGERV 482
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 14/237 (5%)
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES---NVYVGTSLVD 441
L +T+ L R T +L C+ S++Q + A ++ +P S N+ + +
Sbjct: 9 LVITLAVLHDYNHRKTIHLLLR-CATQLSMRQLFEIQAQIIASPIPSIDPNI-IAVKFIG 66
Query: 442 MYSRCGSINDAQASFSS-ISSPNVAAWTALMNGYSHHGLGSEAVLLF--EIMLEQDIVPN 498
+ S G++ + F+ +S PN+ A+ AL+ +S H + F +++L P+
Sbjct: 67 VSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPD 126
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
TF VL AC V EG K+ + YG L +VDL + G A++
Sbjct: 127 EYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFD 186
Query: 559 DMPIELDAVVWGALLSA-CWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
+M + D V W L+S C+ M ++A G+ +K + ++ + + YA +G
Sbjct: 187 EMVVR-DVVSWNTLISGYCFSGM----VDKARMVFDGMMEKNLVSWSTMISGYARVG 238
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/590 (30%), Positives = 311/590 (52%), Gaps = 75/590 (12%)
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN------CFEIEEAKRVFDE 144
LS+ S+ KQIH +K+G C + + +L F + C+ A+++FD
Sbjct: 18 LSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCY----ARQLFDT 73
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ E + W++M GY + I PK V ++ +++ E+ +K
Sbjct: 74 IPEPSVFSWNIMFKGYSR-----------IACPKLGVSLYLEML----------ERNVK- 111
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
P+ YT+ + + R A G+ +H ++K G + + ALI Y
Sbjct: 112 -----------PDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYS 160
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG 324
C D A ++D + N++I+G +NR+ + + IS+ +++ G
Sbjct: 161 LCGLIDMARGIFDMSCKSDVVTWNAMISG-------------YNRIKK-DVISWTAIVTG 206
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
+ GQVD +++ F KMP ER+ V+W +MI GY++ N +++AL
Sbjct: 207 FVNTGQVDAARKYFHKMP-----------------ERDHVSWTAMIDGYLRLNCYKEALM 249
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
L+ M+ I T + AC+ LG+L+ G+ + ++ K +++ +VG +L+DMY
Sbjct: 250 LFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYF 309
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+CG++ A + F+++ + WTA++ G + +G G EA+ +F ML+ + P+ T+VG
Sbjct: 310 KCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVG 369
Query: 505 VLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
VLSAC G+V+EG K F SM + +G+ P + HY C+VDLLG++GHL EA E IK+MP++
Sbjct: 370 VLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMK 429
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
+++VWGALL AC + E+ ERA +++ L+ + YV+ NIYA KW K ++R
Sbjct: 430 PNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELR 489
Query: 624 KRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ + +KK PGCS IE+N VH F D+++P IY L +T++L
Sbjct: 490 QVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDL 539
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 171/345 (49%), Gaps = 24/345 (6%)
Query: 28 CGRN-GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
C R G + AR LFD +P +V SWN M GYS+ A +SL M NVK + T
Sbjct: 57 CSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYT 116
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+ + + +L G+++HC V+K G + F + L+ Y+ C I+ A+ +FD
Sbjct: 117 YPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSC 176
Query: 147 EDNELLWSLMLVGY-----------------VQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
+ + + W+ M+ GY V + A F KMP++D V WT +I
Sbjct: 177 KSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMID 236
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
GY + ++ ++AL LFR M+ S + P+E+T SV+ ACA+LGA G+ + + K
Sbjct: 237 GYLR-LNCYKEALMLFREMQTS-KIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKV 294
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
+ D +G ALI+ Y C + A+ +++ L +++ GL G E+A +F++
Sbjct: 295 KNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQ 354
Query: 310 LTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
+ +A + ++Y ++ G VD+ K+ F M R I N
Sbjct: 355 MLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPN 399
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 66/326 (20%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S +T GQ+ AR F +MP R VSW M+ GY + + E+L L M
Sbjct: 197 VISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQT 256
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S +K +E T ++L+ CAQL +L G+ I + K+ + FVG+ L+ Y C +E
Sbjct: 257 SKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEM 316
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F+ L + ++ W+ M+VG +++G
Sbjct: 317 ALSIFNTLPQRDKFTWTAMVVGL---------------------------------AING 343
Query: 198 C-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
C E+AL +F M ++ P+E T+ V+ AC G EGK
Sbjct: 344 CGEEALNMFSQMLKASVT-PDEVTYVGVLSACTHTGMVDEGK------------------ 384
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEANS 315
+F+ A G P + +++ L G +++A E+I N + NS
Sbjct: 385 ----KFFASMTARHGI--------EPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNS 432
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKM 341
I + +++ ++ + ++R E++
Sbjct: 433 IVWGALLGACRIHKDAEMAERAIEQI 458
>gi|9279602|dbj|BAB01060.1| unnamed protein product [Arabidopsis thaliana]
Length = 598
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 289/561 (51%), Gaps = 60/561 (10%)
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
+L Y++ + A +F +MPK+D V W +ISGY S E A LF M+ SG ++
Sbjct: 41 ILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYT-SCGKLEDAWCLFTCMKRSGSDV 99
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+ Y+F +++ A + F G+ VHGL+IK G+E + +G +L++ Y CE + A
Sbjct: 100 -DGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA 158
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY----------------- 318
+ + P + N+LI G + + I+ A + + +++
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMF 218
Query: 319 -----------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
N+MI YA G V D+KR+F+ +
Sbjct: 219 CNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG------------ 266
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ ++WNSMI+G+ Q L E A++ + +R I FS L +CS L +LQ
Sbjct: 267 ----SKDLISWNSMIAGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQ 322
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN-VAAWTALMNGY 474
GQ +HA K+ F SN +V +SL+ MYS+CG I A+ F ISS + AW A++ GY
Sbjct: 323 LGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGY 382
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPT 533
+ HGLG ++ LF M Q++ + TF +L+AC GL+ EG+++ M+ Y + P
Sbjct: 383 AQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPR 442
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
+EHY VDLLGR+G +++A+E I+ MP+ D +V L C +E+ + A +
Sbjct: 443 MEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLL 502
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
++ + YV LS++Y+ L KW +K ++K + VKK PG SWIE+ ++V AF+ ED
Sbjct: 503 EIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAED 562
Query: 654 RNNPNCNVIYATLEHLTANLN 674
R+NP C IY ++ LT +
Sbjct: 563 RSNPLCQDIYMMIKDLTQEMQ 583
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 209/468 (44%), Gaps = 59/468 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I +N+ + + G L A LFD+MP R VSWNTM+ GY+ K +++ L + M R
Sbjct: 35 IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKR 94
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S ++ +FS +L A + G+Q+H LV+K GYEC +VGS L+ YA C +E+
Sbjct: 95 SGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVED 154
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A F E+ E N + W+ ++ G+VQ + AF + M K V
Sbjct: 155 AFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT-------------- 200
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE-GKVVHGLLIKCGFEFDESIG 256
++G P D + FC K VH ++K G + + +I
Sbjct: 201 -----------MDAGTFAPLLTLLDDPM--------FCNLLKQVHAKVLKLGLQHEITIC 241
Query: 257 GALIEFYCGCEAFDGAMRVYDRL-ENPCLNASNSLINGLISMGRIEDAELIFNRL----T 311
A+I Y C + A RV+D L + L + NS+I G G EDA F+ L
Sbjct: 242 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFAQKGLSEDAVKFFSYLRSSEI 301
Query: 312 EANSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
+ + +++++++ G ++ S + + S+I + + +I +
Sbjct: 302 KVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARK 361
Query: 362 ---------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
+ V WN+MI GY Q+ L + +L L+ M + TF+ + ACS G
Sbjct: 362 CFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTG 421
Query: 413 SLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+Q+G +LL+ + + + VD+ R G +N A+ S+
Sbjct: 422 LIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESM 469
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 18/258 (6%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N ++ Y +G + + LF++MP +R+ V+WN+MISGY
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMP-----------------KRDSVSWNTMISGYTSCGK 81
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
E A L+ M++ D +FS L + + G+ +H ++K +E NVYVG+S
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM-LEQDIVP 497
LVDMY++C + DA +F IS PN +W AL+ G+ A L +M ++ +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
+A TF +L+ N ++ + G+ + ++ G + +A+
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 558 KDMPIELDAVVWGALLSA 575
+ D + W ++++
Sbjct: 262 DGLGGSKDLISWNSMIAG 279
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 160/359 (44%), Gaps = 24/359 (6%)
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+ H IKCG D + +++ Y A ++D + + N++I+G S G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 299 RIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKR---LFEKMPHRSIISL-N 350
++EDA +F + ++ + S++ ++KG A + D ++ L K + + + +
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 351 TMISVIPEMER--------------NPVTWNSMISGYVQNNLHEKALQLYMTMR-KLAID 395
+++ + + ER N V+WN++I+G+VQ + A L M K A+
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
TF+ L + +HA ++K + + + +++ Y+ CGS++DA+
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 456 FSSI-SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F + S ++ +W +++ G++ GL +AV F + +I + F +L +C
Sbjct: 261 FDGLGGSKDLISWNSMIAGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLAT 320
Query: 515 VNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G +I G V + ++ + + G + A + + + + V W A++
Sbjct: 321 LQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 379
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
Q+ L H + +K S++YV ++D Y + G + A F + + +W +++G
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT 533
Y+ G +A LF M + +F +L + G ++ + G
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN 135
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + +VD+ + + +A E K++ E ++V W AL++
Sbjct: 136 VYVGSSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAG 176
>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 199/678 (29%), Positives = 330/678 (48%), Gaps = 58/678 (8%)
Query: 23 KAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL 82
K ++ + G L AR +FD M R + +W+ M+ YS+ ++ E + L M V
Sbjct: 119 KLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLP 178
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
+ F IL C L K IH LV++ G C+ + + +L + C ++ A++ F
Sbjct: 179 DAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFF 238
Query: 143 DELHEDNELLWSLMLVGYVQ-------------------------CNLMSDAF------D 171
+ E + + W++M+ GY Q N+M ++ D
Sbjct: 239 GNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCD 298
Query: 172 VFIKMPKK--------DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+ I + KK DV WT +ISG+++S +AL F+ M +G PN T S
Sbjct: 299 LVIDLKKKMESVGLAPDVYTWTSMISGFSQS-SRISQALDFFKKMILAGVE-PNTITIAS 356
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
ACA L + G +H IK G + +G +LI+ Y C + A V+D +
Sbjct: 357 ATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKD 416
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFE 339
+ NS+I G G A +F RL E+ N +++N+MI G G D + LF+
Sbjct: 417 VYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQ 476
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
M + +RN +WNS+I+GY Q KAL ++ M+ L
Sbjct: 477 IMEKDGGV------------KRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSV 524
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T + AC+ + + ++ + +H +++ ES + V SLVD Y++ G+I ++ F+ +
Sbjct: 525 TILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGM 584
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
SS ++ W +++ GY HG A LF+ M I PN T ++ A AG+V++G
Sbjct: 585 SSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGR 644
Query: 520 KIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
+F S+ + + ++PTL+HY +VDL GRSG L +A EFI+DMPIE D +W +LL+AC F
Sbjct: 645 HVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRF 704
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
N+ + AA+++ L+ Y +L YA+ GK+ + + +RK +KK
Sbjct: 705 HGNLNLAVLAAKRLHELEPDNHVIYRLLVQAYALYGKFEQTLKVRKLGKESAMKKCTAQC 764
Query: 639 WIELNSRVHAFSVEDRNN 656
W+E+ ++VH F D++
Sbjct: 765 WVEVRNKVHLFVTGDQSK 782
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 215/487 (44%), Gaps = 87/487 (17%)
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
E+++ + ++ + KL+ T+ +L C + S+ G+++H + + + FV + L+
Sbjct: 63 EAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELH-VRMGLVHRVNPFVETKLV 121
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
YA C +++A++VFD + E N WS M+ Y + + ++F M V
Sbjct: 122 SMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGV----- 176
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
+P+ + F +++AC K++H L+I+
Sbjct: 177 ----------------------------LPDAFLFPKILQACGNCEDLETVKLIHSLVIR 208
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
CG + Y RL SNS++ + G++ A
Sbjct: 209 CG------------------------LSCYMRL-------SNSILTAFVKCGKLSLARKF 237
Query: 307 FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR----SIISLNTMISVIPE---- 358
F + E + +S+N MI GY G D+++RL + M ++ +++ N MI+ +
Sbjct: 238 FGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDC 297
Query: 359 --------------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+ + TW SMISG+ Q++ +AL + M ++ T +
Sbjct: 298 DLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASA 357
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
AC+ L SLQ G +H +K VG SL+DMYS+CG + A+ F +I +V
Sbjct: 358 TSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDV 417
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
W +++ GY G G +A LF + E ++PN T+ ++S C++ G ++ M +F+
Sbjct: 418 YTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQI 477
Query: 525 MKSYGVV 531
M+ G V
Sbjct: 478 MEKDGGV 484
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 128/519 (24%), Positives = 223/519 (42%), Gaps = 77/519 (14%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N +T + G+L AR F M R VSWN M+ GY + DE+ L+ TM
Sbjct: 218 SNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGF 277
Query: 81 KLNETTFSTILSVCAQLNS---LID-GKQIHCLVLK----------SGYECFEFVGSGLL 126
K T++ +++ +QL +ID K++ + L SG+ + L
Sbjct: 278 KPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALD 337
Query: 127 FFY--------ANCFEIEEAKRVFD---------ELH--------EDNELLWSLMLVGYV 161
FF N I A E+H L+ + ++ Y
Sbjct: 338 FFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYS 397
Query: 162 QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTF 221
+C + A VF + +KDV W +I GY ++ G KA +LF +RES MPN T+
Sbjct: 398 KCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYG-GKAYELFMRLRES-TVMPNVVTW 455
Query: 222 DSVIRACARLGAFCEGKVVHGLLIK-CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
+++I C + G + + ++ K G + + + +LI Y + A+ ++ +++
Sbjct: 456 NAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQ 515
Query: 281 NPCLNASNSLINGLIS-----MGRIEDAEL---IFNRLTEANSISYNSMIKGYAVYGQVD 332
+ + ++ I ++ M + E+ + R E+ NS++ YA G +
Sbjct: 516 SLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIK 575
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
S+ +F M + II TWNS+I+GY+ + + A QL+ MR L
Sbjct: 576 YSRTVFNGMSSKDII-----------------TWNSIIAGYILHGCSDSAFQLFDQMRNL 618
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT-----SLVDMYSRCG 447
I R T + + HA G + +G+ H+ + E + + T ++VD+Y R G
Sbjct: 619 GIRPNRGTLASIIHAYGIAGMVDKGR----HVFSSITEEHQILPTLDHYLAMVDLYGRSG 674
Query: 448 SINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVL 485
+ DA + P+V+ WT+L+ HG + AVL
Sbjct: 675 RLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVL 713
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 5/261 (1%)
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N L +A+ ++ K + +T+ L C +GS++ G+ LH + N +V
Sbjct: 58 NGLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRM-GLVHRVNPFV 116
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
T LV MY++CG + DA+ F + N+ W+A++ YS E V LF +M+ +
Sbjct: 117 ETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGV 176
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
+P+A F +L AC + E +K+ S+ G+ + ++ + G L A
Sbjct: 177 LPDAFLFPKILQACGNCEDL-ETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLAR 235
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP-ISAYVILSNIYAVL 613
+F +M E D V W +++ N + R M KP + Y I+ Y+ L
Sbjct: 236 KFFGNMD-ERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQL 294
Query: 614 GKWGKKMDIRKRLTHLEVKKD 634
G +D++K++ + + D
Sbjct: 295 GDCDLVIDLKKKMESVGLAPD 315
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 140/336 (41%), Gaps = 55/336 (16%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMP-----IRTVVSWNTMLCGYSKWAKFDESLSLV 72
+V+ N I+ C +NG A +LF M R SWN+++ GY + + +++L++
Sbjct: 452 VVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIF 511
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M N N T +IL CA + + K+IH VL+ E V + L+ YA
Sbjct: 512 RQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKS 571
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
I+ ++ VF+ + + + W+ ++ GY+
Sbjct: 572 GNIKYSRTVFNGMSSKDIITWNSIIAGYI------------------------------- 600
Query: 193 KSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
+ GC + A +LF MR G PN T S+I A G +G+ V + +
Sbjct: 601 --LHGCSDSAFQLFDQMRNLGIR-PNRGTLASIIHAYGIAGMVDKGRHVFSSITE----- 652
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLE-------NPCLNASNSLINGLISMGRIEDAE 304
+ I L + + + + R+ D +E P ++ SL+ G + A
Sbjct: 653 EHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAV 712
Query: 305 LIFNRLTE---ANSISYNSMIKGYAVYGQVDDSKRL 337
L RL E N + Y +++ YA+YG+ + + ++
Sbjct: 713 LAAKRLHELEPDNHVIYRLLVQAYALYGKFEQTLKV 748
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 41/181 (22%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + N + ++G + +R +F+ M + +++WN+++ GY D + L
Sbjct: 555 ESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQ 614
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++ N T ++I IH Y
Sbjct: 615 MRNLGIRPNRGTLASI---------------IHA--------------------YGIAGM 639
Query: 135 IEEAKRVFDELHEDNELLWSL-----MLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLI 188
+++ + VF + E++++L +L M+ Y + ++DA + MP + DV +WT L+
Sbjct: 640 VDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLL 699
Query: 189 S 189
+
Sbjct: 700 T 700
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/567 (31%), Positives = 306/567 (53%), Gaps = 37/567 (6%)
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM-PKKDVVV 183
L+ A + +A+++FD E + + W+ ++ Y + ++ DA +F + +++VV
Sbjct: 46 LIVDLAAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNVVT 105
Query: 184 WTKLISGYAKS--VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA---RLGAFCEGK 238
WT L+SGYA++ VD E LF+ M + N ++++++ A A R G C
Sbjct: 106 WTALLSGYARAGLVDEAEV---LFQRMPQR-----NVVSWNTMLEAYAVAGRAGDAC--- 154
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
L + D L+ + D A ++ R+ + A ++++G+ G
Sbjct: 155 ---ALFDRMPVR-DAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSG 210
Query: 299 RIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS---- 354
+++A L+F+ + E N +S+N+MI GY ++D++ LF KMPHR I S N MI+
Sbjct: 211 NVDEARLLFDSMPERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQ 270
Query: 355 ---------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+ EM ERN VTW +M++GY++ E +L L+ M I + TF
Sbjct: 271 NKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGA 330
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
ACS L +L +G+ +H + KT F+ + +VG++L+++Y++CG + A+ F ++
Sbjct: 331 LDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDL 390
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
+W ++ Y+HHG+G EA+ L+E M PN T+V +LSAC +GLV+EG+KIF S
Sbjct: 391 ISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFES 450
Query: 525 M-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE-LDAVVWGALLSACWFWMNM 582
M + EHYTC++DL R+G L +A+ I + I+ VW ALL C N
Sbjct: 451 MVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNE 510
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
+G AA+ + + Y +LSNIYA GKW + +IR + + +KK PGCSWIE+
Sbjct: 511 SIGNLAARNLIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEV 570
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHL 669
++VH F D+++ ++IY L+++
Sbjct: 571 ANKVHVFVARDKSHSESDLIYGLLQNI 597
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 142/583 (24%), Positives = 235/583 (40%), Gaps = 154/583 (26%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIR-TVVSWNTMLCGYSKWAKFDESLSL 71
T E +VS ++ R G L AR+LFD+ R VV+W +L GY++ DE+ L
Sbjct: 66 TPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNVVTWTALLSGYARAGLVDEAEVL 125
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLN------SLIDGKQIH---------CLVLKSGY- 115
M + NV +++T+L A +L D + ++++SG
Sbjct: 126 FQRMPQRNV----VSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAMLVRSGSV 181
Query: 116 -ECFEFVG----------SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
+ E G + ++ A ++EA+ +FD + E N + W+ M+ GY + +
Sbjct: 182 DKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISGYTRNH 241
Query: 165 LMSDAFDVFIKMPKKD-------------------------------VVVWTKLISGYAK 193
+ +A D+F KMP +D VV WT +++GY K
Sbjct: 242 RLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYLK 301
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
E +L LFR M SG PN+ TF + AC+ L CEGK VH ++ K F+ D
Sbjct: 302 GKQ-SELSLGLFRGMLMSGIR-PNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDT 359
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
+G AL+ Y C G + A +F+ E
Sbjct: 360 FVGSALMNVYAKC-------------------------------GEVGLARKLFDLSREK 388
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
+ IS+N +I YA +G ++ L+EKM +GY
Sbjct: 389 DLISWNGIIAAYAHHGVGIEAIHLYEKMQG---------------------------NGY 421
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
N++ T+ VL ACS G + +G + +V + ++
Sbjct: 422 RPNDV---------------------TYVVLLSACSHSGLVDEGLKIFESMVN---DRSI 457
Query: 434 YVG----TSLVDMYSRCGSINDAQA--SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
V T L+D+ SR G ++DA+ + I + + W+AL+ G + HG S L
Sbjct: 458 AVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAA 517
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
+++ + NA T+ + + AG E +I M + G+
Sbjct: 518 RNLIQAE-PDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGL 559
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 145/314 (46%), Gaps = 44/314 (14%)
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG 324
G A A +R ++P N LI L + GR+ DA +F+ E + +S+ +++
Sbjct: 26 GSAAATSAAVGLERAQDP-----NRLIVDLAAAGRVWDARKLFDGTPERDVVSWTALVSA 80
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
YA G + D++ LF++ R RN VTW +++SGY + L ++A
Sbjct: 81 YARRGMLRDARSLFDRSDAR----------------RNVVTWTALLSGYARAGLVDEAEV 124
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL-VKTPFESNVYVGTSLVDMY 443
L+ M + R +++ + A + G L + V+ N+ L+ M
Sbjct: 125 LFQRMPQ----RNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNI-----LLAML 175
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
R GS++ A+ F + +V AWT +++G + G EA LLF+ M E+++V ++
Sbjct: 176 VRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVV----SWN 231
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG--RSGHLHEAEEFIKDMP 561
++S R ++E + +F M P + +C + + G ++ L A + +MP
Sbjct: 232 AMISGYTRNHRLDEALDLFTKM------PHRDIASCNIMITGFIQNKDLKRARKLFDEMP 285
Query: 562 IELDAVVWGALLSA 575
E + V W +++
Sbjct: 286 -ERNVVTWTTMMNG 298
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/539 (34%), Positives = 287/539 (53%), Gaps = 31/539 (5%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y + + A VF +P D V+W L++G + S +A++ F M G P+
Sbjct: 159 YFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS-----EAVESFARMVCDGSVRPDAT 213
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T SV+ A A + G+ VH KCG E + LI Y C + A ++D +
Sbjct: 214 TLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMM 273
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSK 335
E P L A N+LI+G G + + +F L NS + ++I ++ +G D
Sbjct: 274 EKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGH-DLLA 332
Query: 336 RLFEKMPHRSIISLNTMISV--------IPEM-----------ERNPVTWNSMISGYVQN 376
+ +S + N+ +S + +M E+ +WN+MISGY QN
Sbjct: 333 QCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQN 392
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
L E A+ L+ M KL + T S AC+ LG+L G+ LH + + E NVYV
Sbjct: 393 GLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVM 452
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
T+L+DMY++CGSI++A+ F+++ + NV +W A++ GY HG G+EA+ L++ ML+ ++
Sbjct: 453 TALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLL 512
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P +ATF+ VL AC GLV EG K+FRSM Y + P +EH TC+VDLLGR+G L EA E
Sbjct: 513 PTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFE 572
Query: 556 FIKDMPIE-LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
I + P + VWGALL AC + ++ + A+QK+F LD + YV+LSN++
Sbjct: 573 LISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKK 632
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
++ + +R+ ++ K PG + IE+ ++ H F DR +P IY+ LE LTA +
Sbjct: 633 QYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKM 691
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 201/484 (41%), Gaps = 63/484 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR +FD +P V WNT+L G S + +V +V+ + TT +++L A+
Sbjct: 168 ARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCD---GSVRPDATTLASVLPAAAE 224
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ + G+ +H K G E V +GL+ Y+ C ++E A+ +FD
Sbjct: 225 VADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFD------------- 271
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENM 215
M K D+V + LISGY SV+G ++ LF + G
Sbjct: 272 ------------------MMEKPDLVAYNALISGY--SVNGMVGSSVNLFTELMTLGL-W 310
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN T ++I + G + +HG ++K GF + + A+ +C + A +
Sbjct: 311 PNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKA 370
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQV 331
+D + + + N++I+G G E A +F ++ + N I+ +S + A G +
Sbjct: 371 FDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGAL 430
Query: 332 DDSKRLFEKMPHR----------SIISLNTMISVIPEMER--------NPVTWNSMISGY 373
K L + ++I + I E R N V+WN+MI+GY
Sbjct: 431 SLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGY 490
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESN 432
+ +AL+LY M + T +TF + +ACS G +++G ++ +
Sbjct: 491 GLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPG 550
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA--WTALMNGYSHHGLGSEAVLLFEIM 490
+ T +VD+ R G + +A S V W AL+ H A L + +
Sbjct: 551 IEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKL 610
Query: 491 LEQD 494
E D
Sbjct: 611 FELD 614
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 167/381 (43%), Gaps = 25/381 (6%)
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED-AELIFNRL 310
D + AL + Y D A +V+D + +P N+L+ GL +E A ++ +
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCDGS 207
Query: 311 TEANSISYNSMIKGYAVYGQVDDSK---RLFEK---MPHRSIISLNTMISV--------- 355
++ + S++ A V + EK H + L +IS+
Sbjct: 208 VRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHV--LTGLISLYSKCGDVES 265
Query: 356 ---IPEMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
+ +M P V +N++ISGY N + ++ L+ + L + ST L S
Sbjct: 266 ARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSP 325
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
G Q LH ++K+ F +N V T++ ++ R + A+ +F ++ + +W A+
Sbjct: 326 FGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAM 385
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
++GY+ +GL AV LFE M++ ++ PN T LSAC + G ++ G + R + +
Sbjct: 386 ISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDL 445
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
P + T ++D+ + G + EA M + + V W A+++ + +
Sbjct: 446 EPNVYVMTALIDMYAKCGSISEARRIFNTMDNK-NVVSWNAMIAGYGLHGQGAEALKLYK 504
Query: 591 KMFGLDKKPISAYVILSNIYA 611
M P SA LS +YA
Sbjct: 505 DMLDAHLLPTSA-TFLSVLYA 524
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 131/310 (42%), Gaps = 64/310 (20%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + +AR LFD M +V++N ++ GYS S++L + + + N +T ++
Sbjct: 261 GDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALI 320
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
V + + + +H VLKSG+ V + + + ++E A++ FD + E
Sbjct: 321 PVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTME 380
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY Q L A +F +M K +V
Sbjct: 381 SWNAMISGYAQNGLTEMAVALFEQMVKLNV------------------------------ 410
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
PN T S + ACA+LGA GK +H ++ + E + + ALI+ Y C +
Sbjct: 411 ---RPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISE 467
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A R+++ ++N N +S+N+MI GY ++GQ
Sbjct: 468 ARRIFNTMDN-------------------------------KNVVSWNAMIAGYGLHGQG 496
Query: 332 DDSKRLFEKM 341
++ +L++ M
Sbjct: 497 AEALKLYKDM 506
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 105/219 (47%), Gaps = 34/219 (15%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VST C R + +AR FD MP +T+ SWN M+ GY++ + +++L M +
Sbjct: 350 VSTAITTLHC-RLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKL 408
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
NV+ N T S+ LS CAQL +L GK +H ++ + E +V + L+ YA C I EA
Sbjct: 409 NVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEA 468
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+R+F+ + N + W+ M I+GY G
Sbjct: 469 RRIFNTMDNKNVVSWNAM-------------------------------IAGYGLHGQGA 497
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
E ALKL++ M ++ +P TF SV+ AC+ G EG
Sbjct: 498 E-ALKLYKDMLDA-HLLPTSATFLSVLYACSHGGLVEEG 534
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 136/307 (44%), Gaps = 33/307 (10%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
+++ K Y V +VD ++++F+ +P + V WN++++G +
Sbjct: 153 SALAKLYFVLSRVDHARKVFDTVP-----------------SPDTVLWNTLLAGLSGSEA 195
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
E ++ ++ +T + + A + + + G+ +H+ K + +V T
Sbjct: 196 VESFARMVCDG---SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTG 252
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+ +YS+CG + A+ F + P++ A+ AL++GYS +G+ +V LF ++ + PN
Sbjct: 253 LISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPN 312
Query: 499 AATFVGVLSACVRAG--LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
++T V ++ G L+ + + F +KS G T + L R + A +
Sbjct: 313 SSTLVALIPVHSPFGHDLLAQCLHGF-VLKS-GFTANSPVSTAITTLHCRLNDMESARKA 370
Query: 557 IKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV---- 612
MP E W A++S E+ ++M L+ +P + I S + A
Sbjct: 371 FDTMP-EKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRP-NPITISSTLSACAQLG 428
Query: 613 ---LGKW 616
LGKW
Sbjct: 429 ALSLGKW 435
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
LHA V + ++ +V ++L +Y ++ A+ F ++ SP+ W L+ G S
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS---- 191
Query: 480 GSEAVLLFEIML-EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
GSEAV F M+ + + P+A T VL A V G + + G+ T
Sbjct: 192 GSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLT 251
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
++ L + G + E+ + DM + D V + AL+S
Sbjct: 252 GLISLYSKCGDV-ESARCLFDMMEKPDLVAYNALIS 286
>gi|356528451|ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 579
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 301/542 (55%), Gaps = 29/542 (5%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+++ A+++FDE+ + + W+ ML Y Q L+ + +F MP ++VV W +I+ +
Sbjct: 44 KVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSKALFHSMPLRNVVSWNSIIAACVQ 103
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ D + A FR++ + E N +++++I AR G + + + + C
Sbjct: 104 N-DNLQDA---FRYLAAAPEK--NAASYNAIISGLARCGRMKDAQRLFEAM-PCPNVVSY 156
Query: 254 SIGGALIEFYCGCEAFDGAMR-VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+ A+++ Y E G R +++ + + +INGL+ G E+A +F R+ +
Sbjct: 157 T---AMVDGYARVEGGIGRARALFEAMPRRNSVSWVVMINGLVENGLCEEAWEVFVRMPQ 213
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
N ++ +MI G+ G+++D++ LF+++ R ++S WN +++G
Sbjct: 214 KNDVARTAMITGFCKEGRMEDARDLFQEIRCRDLVS-----------------WNIIMTG 256
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
Y QN E+AL L+ M + + TF +F AC+ L SL++G HA L+K F+S+
Sbjct: 257 YAQNGRGEEALNLFSQMIRTGMQPDDLTFVSVFIACASLASLEEGSKAHALLIKHGFDSD 316
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
+ V +L+ ++S+CG I D++ F IS P++ +W ++ ++ HGL +A F+ M+
Sbjct: 317 LSVCNALITVHSKCGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFDQMVT 376
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
+ P+ TF+ +LSAC RAG VNE M +F M +YG+ P EHY C+VD++ R+G L
Sbjct: 377 VSVQPDGITFLSLLSACCRAGKVNESMNLFSLMVDNYGIPPRSEHYACLVDVMSRAGQLQ 436
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
A + I +MP + D+ +WGA+L+AC +N+E+GE AA+++ LD AYV+LSNIYA
Sbjct: 437 RACKIINEMPFKADSSIWGAVLAACSVHLNVELGELAARRILNLDPFNSGAYVMLSNIYA 496
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
GKW IR + VKK SW+++ ++ H F D ++PN N I+ L +T
Sbjct: 497 AAGKWKDVHRIRVLMKEQGVKKQTAYSWLQIGNKTHYFVGGDPSHPNINDIHVALRRITL 556
Query: 672 NL 673
++
Sbjct: 557 HM 558
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/516 (24%), Positives = 222/516 (43%), Gaps = 107/516 (20%)
Query: 10 TLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL 69
TL + + N I R G++ AR LFD+M + VV+WN+ML Y + S
Sbjct: 21 TLFSSTRDVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSK 80
Query: 70 SLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY 129
+L +M NV ++++I++ C Q ++L D + + + + SGL
Sbjct: 81 ALFHSMPLRNV----VSWNSIIAACVQNDNLQDAFRYLAAAPEKNAASYNAIISGL---- 132
Query: 130 ANCFEIEEAKR--------------------------------VFDELHEDNELLWSLML 157
A C +++A+R +F+ + N + W +M+
Sbjct: 133 ARCGRMKDAQRLFEAMPCPNVVSYTAMVDGYARVEGGIGRARALFEAMPRRNSVSWVVMI 192
Query: 158 VGYVQCNLMSDAFDVFIKMPKK-------------------------------DVVVWTK 186
G V+ L +A++VF++MP+K D+V W
Sbjct: 193 NGLVENGLCEEAWEVFVRMPQKNDVARTAMITGFCKEGRMEDARDLFQEIRCRDLVSWNI 252
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
+++GYA++ G E+AL LF M +G P++ TF SV ACA L + EG H LLIK
Sbjct: 253 IMTGYAQNGRG-EEALNLFSQMIRTGMQ-PDDLTFVSVFIACASLASLEEGSKAHALLIK 310
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
GF+ D S+ ALI + C + V+ ++ +P L + N++I G + A
Sbjct: 311 HGFDSDLSVCNALITVHSKCGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSY 370
Query: 307 FNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKM------PHRSIISLNTMISVI 356
F+++ + + I++ S++ G+V++S LF M P RS ++
Sbjct: 371 FDQMVTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLMVDNYGIPPRS----EHYACLV 426
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
M R +G +Q +A ++ + ++ S + + ACS +++
Sbjct: 427 DVMSR---------AGQLQ-----RACKI---INEMPFKADSSIWGAVLAACSVHLNVEL 469
Query: 417 GQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGSIND 451
G+L ++ PF S YV L ++Y+ G D
Sbjct: 470 GELAARRILNLDPFNSGAYV--MLSNIYAAAGKWKD 503
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 145/328 (44%), Gaps = 41/328 (12%)
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
+N I L G+++ A +F+ + + +++NSM+ Y G + SK LF MP R++
Sbjct: 32 ANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSKALFHSMPLRNV 91
Query: 347 ISLNTMIS--------------VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR-- 390
+S N++I+ + E+N ++N++ISG + + A +L+ M
Sbjct: 92 VSWNSIIAACVQNDNLQDAFRYLAAAPEKNAASYNAIISGLARCGRMKDAQRLFEAMPCP 151
Query: 391 ---------------KLAIDRTRSTFSVLFHACSCL------GSLQQGQLLHAH--LVKT 427
+ I R R+ F + S G ++ G A V+
Sbjct: 152 NVVSYTAMVDGYARVEGGIGRARALFEAMPRRNSVSWVVMINGLVENGLCEEAWEVFVRM 211
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
P +++V T+++ + + G + DA+ F I ++ +W +M GY+ +G G EA+ LF
Sbjct: 212 PQKNDV-ARTAMITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEALNLF 270
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
M+ + P+ TFV V AC + EG K + +G L ++ + +
Sbjct: 271 SQMIRTGMQPDDLTFVSVFIACASLASLEEGSKAHALLIKHGFDSDLSVCNALITVHSKC 330
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + ++E + D V W +++A
Sbjct: 331 GGIVDSELVFGQIS-HPDLVSWNTIIAA 357
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 424 LVKTPFES--NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
++ T F S +VY + SR G ++ A+ F +++ +V W ++++ Y +GL
Sbjct: 18 VLATLFSSTRDVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQ 77
Query: 482 EAVLLFEIMLEQDIV---------------------------PNAATFVGVLSACVRAGL 514
+ LF M +++V NAA++ ++S R G
Sbjct: 78 RSKALFHSMPLRNVVSWNSIIAACVQNDNLQDAFRYLAAAPEKNAASYNAIISGLARCGR 137
Query: 515 VNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR-SGHLHEAEEFIKDMPIELDAVVWGALL 573
+ + ++F +M P + YT +VD R G + A + MP ++V W ++
Sbjct: 138 MKDAQRLFEAMP----CPNVVSYTAMVDGYARVEGGIGRARALFEAMP-RRNSVSWVVMI 192
Query: 574 SA 575
+
Sbjct: 193 NG 194
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 296/552 (53%), Gaps = 58/552 (10%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A VF + + ++++W + G+A S D AL L+ M G +PN YTF ++++C
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVS-ALYLYVCMISLGL-LPNCYTFPFLLKSC 113
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A+ AF EG+ +HG ++K G++ D + +LI Y + A +V+D+ + + +
Sbjct: 114 AKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYT 173
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI-I 347
+LI G S G I A+ +F+ + + +S+N+MI GYA G ++ LF++M ++
Sbjct: 174 ALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRP 233
Query: 348 SLNTMISVIP-----------------------------------------EME------ 360
+TM+SV+ E+E
Sbjct: 234 DESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLF 293
Query: 361 -----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ ++WN++I GY NL+++AL L+ M + T + AC+ LG+++
Sbjct: 294 EGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIE 353
Query: 416 QGQLLHAHLVK--TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
G+ +H ++ K + TSL+DMY++CG I AQ F SI + ++++W A++ G
Sbjct: 354 IGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFG 413
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVP 532
++ HG + A +F M + +I P+ TFVG+LSAC +G+++ G IFRSMK Y + P
Sbjct: 414 FAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITP 473
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
LEHY C++DLLG SG EAEE I M +E D V+W +LL AC + N+E+GE AQ +
Sbjct: 474 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNL 533
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
++ K +YV+LSNIYA G+W + IR L +KK PGCS IE++S VH F +
Sbjct: 534 IKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 593
Query: 653 DRNNPNCNVIYA 664
D+ +P IY
Sbjct: 594 DKFHPRNREIYG 605
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 143/531 (26%), Positives = 250/531 (47%), Gaps = 54/531 (10%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A ++F+ + ++ WNTM G++ + +L L M + N TF +L
Sbjct: 53 LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKS 112
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
CA+ + +G+QIH VLK GY+ +V + L+ Y +E+A++VFD+ + + +
Sbjct: 113 CAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSY 172
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++ GY ++ A +F ++P KDVV W +ISGYA++ + E AL+LF+ M ++
Sbjct: 173 TALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKE-ALELFKEMMKTNV 231
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+E T SV+ ACA+ + G+ VH + GF + I ALI+ Y C + A
Sbjct: 232 R-PDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 290
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYG 329
+++ L + + N+LI G M ++A L+F + + N ++ S++ A G
Sbjct: 291 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG 350
Query: 330 QVD--------DSKRL---FEKMPHRSIISLNTMISVIPEME-----------RNPVTWN 367
++ +KRL HR+ SL M + ++E R+ +WN
Sbjct: 351 AIEIGRWIHVYINKRLKGVANASSHRT--SLIDMYAKCGDIEAAQQVFDSILNRSLSSWN 408
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+MI G+ + A ++ MRK I+ TF L ACS G L G+ H+ ++
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGR----HIFRS 464
Query: 428 PFESNVYVGT-----SLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG---YSHHG 478
E ++D+ G +A+ +++ P+ W +L+ Y++
Sbjct: 465 MKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVE 524
Query: 479 LG-SEAVLLFEI--------MLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
LG S A L +I +L +I A + V A +RA L ++GMK
Sbjct: 525 LGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEV--AKIRALLNDKGMK 573
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 206/441 (46%), Gaps = 57/441 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS IT G + +A+ +FD++PI+ VVSWN M+ GY++ E+L L M +
Sbjct: 169 VVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK 228
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+NV+ +E+T +++S CAQ S+ G+Q+H + G+ + + L+ Y C E+E
Sbjct: 229 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F+ L + + W+ ++ GY NL
Sbjct: 289 ACGLFEGLSYKDVISWNTLIGGYTHMNLY------------------------------- 317
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK--CGFEFDESI 255
++AL LF+ M SGE+ PN+ T S++ ACA LGA G+ +H + K G S
Sbjct: 318 -KEALLLFQEMLRSGES-PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSH 375
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----T 311
+LI+ Y C + A +V+D + N L++ N++I G GR A IF+R+
Sbjct: 376 RTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEI 435
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
E + I++ ++ + G +D + +F M I+ P++E + MI
Sbjct: 436 EPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKIT--------PKLEH----YGCMID 483
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFE 430
+ L ++A ++ TM ++ + L AC +++ G+ +L+K P
Sbjct: 484 LLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKN 540
Query: 431 SNVYVGTSLVDMYSRCGSIND 451
YV L ++Y+ G N+
Sbjct: 541 PGSYV--LLSNIYATAGRWNE 559
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 126/281 (44%), Gaps = 27/281 (9%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD---MYSRCGSINDAQASFSSIS 460
L H C L SL+ ++HA ++KT + Y + L++ + + A + F +I
Sbjct: 8 LLHNCKTLQSLR---MIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQ 64
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
PN+ W + G++ A+ L+ M+ ++PN TF +L +C ++ EG +
Sbjct: 65 EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQ 124
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWM 580
I + G L +T ++ + ++G L +A + + D D V + AL++ +
Sbjct: 125 IHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARK-VFDQSSHRDVVSYTALITG--YAS 181
Query: 581 NMEVGERAAQKMFGLDKKPISAYVILSNI---YAVLGKWGKKMDIRKRLTHLEVKKD--- 634
+ +AQKMF D+ PI V + + YA G + +++ K + V+ D
Sbjct: 182 KGYIA--SAQKMF--DEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDEST 237
Query: 635 -----PGCSW---IELNSRVHAFSVEDRNNPNCNVIYATLE 667
C+ IEL +VH++ + N ++ A ++
Sbjct: 238 MVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALID 278
>gi|449523934|ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/657 (30%), Positives = 331/657 (50%), Gaps = 89/657 (13%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S NK I+ R G++ AR LFD ++WN M+ Y K + ++ L M +
Sbjct: 59 SLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRD 118
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ + ++ SGY + G F +E A+
Sbjct: 119 I-------------------------VSWNLMLSGY-----ISCGGKF-------VERAR 141
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+FD++ E + + W+ ML GY + M A ++F +MP+++VV W ++SGY + E
Sbjct: 142 NMFDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNEMPERNVVSWNAMVSGYLMN-GHVE 200
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG---FEFDESIG 256
KA++ F+ M + R A L A G + + L++ ++ ++G
Sbjct: 201 KAIEFFKLMPK---------------RDSASLRALVSGLIQNDKLVEAERILLQYGGNVG 245
Query: 257 -GALIEFYCGCEAFDG-------AMRVYDRLENPC--------LNASNSLINGLISMGRI 300
G L++ Y A G A +++DR+ C + + NS+I + G I
Sbjct: 246 KGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDI 305
Query: 301 EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM- 359
A +F+++ E ++ S+N+MI GY + ++ LF +MP +S N MIS E+
Sbjct: 306 VSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIG 365
Query: 360 -------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
E++ V+WNSMISGY +N ++ A+ +++ M+ R T S +
Sbjct: 366 SLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILS 425
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVA 465
AC+ L L G +H LV F +++ + SLV MYSRCG+I +A+ F ++ +V
Sbjct: 426 ACAGLVDLVLGTQIH-QLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVI 484
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
+W A++ GY++HG +EA+ LF++M + ++ P+ TF+ VL+AC AGL+ EG + F SM
Sbjct: 485 SWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSM 544
Query: 526 -KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
++G+ P +EHY +VD++GR G L EA I MP E D VWGALL AC N+E+
Sbjct: 545 VNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVEM 604
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
AA+ + L + + YV+L N+YA +G+W ++R + V+KD G S ++
Sbjct: 605 ARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSRVD 661
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 204/462 (44%), Gaps = 73/462 (15%)
Query: 17 LIVSTNKAITECGRNGQLVTARNLFDQMPI--------RTVVSWNTMLCGYSKWAKFDES 68
L+ + N I G+ G AR LFD++P+ R V+SWN+M+ Y + +
Sbjct: 249 LVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSA 308
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
L M + TFS N++I G
Sbjct: 309 RELFDKM------VERDTFS--------WNTMISG------------------------- 329
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
Y +++EA +F + E + L W++M+ G+ + + A D+F ++P+K +V W +I
Sbjct: 330 YVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMI 389
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
SGY K+ D + A+ +F M+ G+ P+ +T S++ ACA L G +H L+ K
Sbjct: 390 SGYEKNED-YKGAMNIFLQMQLEGKK-PDRHTLSSILSACAGLVDLVLGTQIHQLVTK-A 446
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIF 307
F D I +L+ Y C A A V+D + + + N++I G G +A +F
Sbjct: 447 FIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLF 506
Query: 308 NRLTEAN----SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP 363
+ + + N I++ S++ A G +++ +R F M +NT + P++E
Sbjct: 507 DLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSM-------VNTH-GIKPQVEH-- 556
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
+ +++ ++ E+A+ L +M + ++ + L AC +++ +
Sbjct: 557 --YAALVDIIGRHGQLEEAMSLINSM---PCEPDKAVWGALLGACKVHNNVEMARAAAEA 611
Query: 424 LVK-TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
L+K P S YV L +MY+ G +DA + + NV
Sbjct: 612 LMKLQPESSAPYV--LLHNMYADVGRWDDAAEMRTMMEKNNV 651
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/490 (34%), Positives = 267/490 (54%), Gaps = 51/490 (10%)
Query: 169 AFDVFIK-MPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
A DVF + D +W +I G + S D +++L L+ M N YTF +++A
Sbjct: 62 AHDVFFNGFDRPDTFLWNLMIRGLSCS-DQPDRSLLLYHRMLCCSAPH-NAYTFPFLLKA 119
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
C+ L AF E +H + K G+ D + A
Sbjct: 120 CSNLSAFQETTQIHAHITKFGYGHD-------------------------------IYAV 148
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
NSLIN G + A L+F+R+ E +++S+NS+IKGY G++D + LF KMP ++
Sbjct: 149 NSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKN-- 206
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
N ++W +MISGYVQ ++++ALQL+ M+ + + + A
Sbjct: 207 --------------NAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSA 252
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CS LG+L+QG+ +H++ KT + + L+DMY++CG + +A F ++ + +V W
Sbjct: 253 CSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVW 312
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
TAL++GY++HGLG EA+ F M + PNA TF VL+AC GLV EG +F ++ +
Sbjct: 313 TALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIER 372
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
Y + PT+EHY C+VDLLGR+G L+EA FI+ MP++ +AV+WG+LL AC N+E+GE
Sbjct: 373 DYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGE 432
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
+ + + +D YV ++NI+A+ KW K + R+ + V K PGCS I L
Sbjct: 433 KIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTT 492
Query: 647 HAFSVEDRNN 656
H F DR++
Sbjct: 493 HEFLAGDRSH 502
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 144/293 (49%), Gaps = 9/293 (3%)
Query: 52 WNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL 111
WN M+ G S + D SL L M + N TF +L C+ L++ + QIH +
Sbjct: 78 WNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHIT 137
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
K GY + + L+ YA + A +FD + E + + W+ ++ GYV+ M A
Sbjct: 138 KFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALT 197
Query: 172 VFIKMPKK-DVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACA 229
+F KMP+K + + WT +ISGY ++ G K AL+LF M+ S P+ + S + AC+
Sbjct: 198 LFRKMPEKNNAISWTTMISGYVQA--GMNKEALQLFHEMQNSNVP-PDNVSLASALSACS 254
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
+LGA +GK +H K D + LI+ Y C + A+ V+ ++ + +
Sbjct: 255 QLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTA 314
Query: 290 LINGLISMGRIEDAELIF----NRLTEANSISYNSMIKGYAVYGQVDDSKRLF 338
LI+G G +A F N + N+I++ +++ + G V++ K +F
Sbjct: 315 LISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVF 367
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 97/228 (42%), Gaps = 34/228 (14%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLV 72
QE VS N I + G++ A LF +MP + +SW TM+ GY + E+L L
Sbjct: 172 QEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLF 231
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M SNV + + ++ LS C+QL +L GK IH K+ + L+ YA C
Sbjct: 232 HEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKC 291
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
E+EEA VF + + +W+ ++ GY L +A F++M V
Sbjct: 292 GEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGV----------- 340
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
PN TF +V+ AC+ G EGK V
Sbjct: 341 ----------------------KPNAITFTAVLTACSYTGLVEEGKSV 366
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 191/632 (30%), Positives = 317/632 (50%), Gaps = 59/632 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR +FD+M T + WN M+ GY+ ++L L M RS V + T + + A
Sbjct: 72 ARKVFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAA 131
Query: 97 LNS---LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
S G +H LV + G+ FV SGL+ FY +E+A++VF+E+HE + + W
Sbjct: 132 FASWKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSW 191
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+LM+ + QC W ++ +S+D M+ G
Sbjct: 192 TLMISAFAQCGQ------------------WDNVL----RSLDE----------MQSEGT 219
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
PN+ T S++ AC ++ A +G V+ + + G E D I ALI Y C A
Sbjct: 220 K-PNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSDAW 278
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYG 329
+ + + + N+LI+G + G+ ++A +F + + I+ S++ YA G
Sbjct: 279 KTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLG 338
Query: 330 QVDDSKRLFEKMP----HRSIISLNTMISVIPE--------------MERNPVTWNSMIS 371
+ + L + H II N++I++ + R+ V+W +M+
Sbjct: 339 DLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVC 398
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
GYV+ A L+ M+ + + L ACS LG+L +G+ +H+++ + +
Sbjct: 399 GYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRT 458
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
++++ ++LVDMY++CG I+ A FS + AW A++ G + G G EAV LFE +L
Sbjct: 459 DMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLL 518
Query: 492 E-QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
+ +D P+A T VL AC G+V+EG+ F M + G+VP EHY C+VDLLGR+G L
Sbjct: 519 KLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHYGCIVDLLGRAGLL 578
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
EA FI+ MPI+ + V+WG+LL+AC ME+G+ Q + L + A+V++SN++
Sbjct: 579 DEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHIIDLAPNDVGAHVLISNLH 638
Query: 611 AVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
A G+W +R + V+K PG S I++
Sbjct: 639 AEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQV 670
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 209/445 (46%), Gaps = 28/445 (6%)
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
+L V + M A VF +M + +VW +I GY S AL+LFR MR SG +
Sbjct: 59 LLASPVSRHDMPYARKVFDRMAQPTAIVWNCMIRGY-NSCHAPMDALELFRAMRRSGVS- 116
Query: 216 PNEYTFDSVIRACARLGAF---CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
P+ YT +V ++ A ++ G VH L+ + GF D + LI FY ++ + A
Sbjct: 117 PDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDA 176
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMI------ 322
+V++ + + + +I+ G+ ++ + + T+ N I+ S++
Sbjct: 177 RKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQV 236
Query: 323 ----KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTWNSMI 370
KG VY +VD+ + ++I + + + RN +WN++I
Sbjct: 237 RAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLI 296
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
G+VQN H++AL ++ M + T + + LG LQQG+ LH ++
Sbjct: 297 DGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIH 356
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
++ + SL++MY++CG + A+ F +++ ++ +WTA++ GY A LF+ M
Sbjct: 357 CDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDM 416
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
+D++ + V +LSAC + G +++G +I +K V + + +VD+ + G +
Sbjct: 417 KVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCI 476
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
A E M + + W A++
Sbjct: 477 DAAAEIFSRMRHK-QTLAWNAMIGG 500
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/496 (19%), Positives = 202/496 (40%), Gaps = 63/496 (12%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G + + AR +F++M R VVSW M+ +++ ++D L + M K N+ T
Sbjct: 168 GASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITII 227
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++LS C Q+ ++ G ++ V + G E + + L+ Y C + +A + F +
Sbjct: 228 SLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIR 287
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N W+ ++ G+VQ +A +F +M V+
Sbjct: 288 NTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVI-------------------------- 321
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
P+ T SV+ A+LG +G+ +H + D + +LI Y C
Sbjct: 322 -------PDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGD 374
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN----RLTEANSISYNSMIKG 324
A +++ + + + +++ G + + A +F+ R A+ ++ S++
Sbjct: 375 MAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSA 434
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTW 366
+ G +D + + + +S+ + + S + +M + + W
Sbjct: 435 CSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAW 494
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQG-QLLHAHL 424
N+MI G ++A+ L+ + KL + + T V+ AC+ +G + +G + L
Sbjct: 495 NAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLML 554
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG-YSHHGLGSE 482
N + G +VD+ R G +++A + PN W +L+ HH +
Sbjct: 555 TLGIVPDNEHYGC-IVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELG 613
Query: 483 AVLLFEIMLEQDIVPN 498
++ I+ D+ PN
Sbjct: 614 KIIGQHII---DLAPN 626
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 135/335 (40%), Gaps = 40/335 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I+ N I + G + A +F+ M R +VSW M+CGY K +F + +L M
Sbjct: 359 IILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKV 418
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+V +E ++LS C+QL +L G++IH + + ++ S L+ YA C I+
Sbjct: 419 RDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDA 478
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F + L W+ M I G A G
Sbjct: 479 AAEIFSRMRHKQTLAWNAM-------------------------------IGGLASQGQG 507
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E A+ LF + + + P+ T V+ AC +G EG L++ G D G
Sbjct: 508 KE-AVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHYG 566
Query: 258 ALIEFYCGCEAFDGAMRVYDRL---ENPCLNASNSLINGLISMGRIEDAELIFNRLTE-- 312
+++ D A ++ NP + SL+ R+E ++I + +
Sbjct: 567 CIVDLLGRAGLLDEAYNFIQKMPIQPNPVI--WGSLLAACRVHHRMELGKIIGQHIIDLA 624
Query: 313 ANSISYNSMIKG-YAVYGQVDDSKRLFEKMPHRSI 346
N + + +I +A GQ DD +++ M R +
Sbjct: 625 PNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRV 659
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 196/650 (30%), Positives = 333/650 (51%), Gaps = 59/650 (9%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNETTF 87
G G L + +FD+M R VVSWN+++ +S + E++ L M+ RS + N +
Sbjct: 53 GNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSI 112
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
++L VCA L + G+QIHC V+K+G + VG+ L+ Y C
Sbjct: 113 VSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKC--------------- 157
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
GYV+ D+ VF ++ +++ V W +I+ A ++ + AL++FR
Sbjct: 158 -----------GYVK-----DSRRVFDEISERNGVSWNAIITSLA-YLERNQDALEMFRL 200
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M + G PN TF S++ L F GK +HG ++ G E D + ALI+ Y
Sbjct: 201 MIDGGVK-PNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSG 259
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-----NSISYNSMI 322
A V++++ + + N+++ + R+E A + R +A NS+++ +++
Sbjct: 260 RSLQASNVFNQIGEKNIVSWNAMVANF-AQNRLELAAVDLVRQMQADGEIPNSVTFTNVL 318
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS------------------VIPEMERNPV 364
A G + K + + R+ S++ +S V R+ V
Sbjct: 319 PACARIGFLRPGKEIHARAI-RTGSSVDLFVSNALTDMYAKCGCLNLARRVFKISLRDEV 377
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
++N +I GY Q ++L+L++ M + ++ + AC+ L +L+QG+ +H
Sbjct: 378 SYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLA 437
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
V+ +++++ +L+D Y +CG I+ A F I S + A+W +++ GY G + A+
Sbjct: 438 VRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAI 497
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
LFE M E + ++ +++ VLSAC GLV EG K F M+ + PT HY C+VDLL
Sbjct: 498 NLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMVDLL 557
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G + EA + I+ +PIE DA VWGALL AC +E+ AA+ +F L + Y
Sbjct: 558 GRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYS 617
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
+LSN+YA GKW + +RK + KK+PGCSW++++++VHAF +R
Sbjct: 618 VLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGER 667
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 158/641 (24%), Positives = 281/641 (43%), Gaps = 120/641 (18%)
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V+L++ TF +L CA S+ G++IH +V K G++ FVG+ LL FY NC +++ K
Sbjct: 3 VRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVK 62
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC- 198
RVFD +M ++DVV W +I + SV G
Sbjct: 63 RVFD-------------------------------EMLERDVVSWNSVIGVF--SVHGFY 89
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+A+ LF M PN + SV+ CA L G+ +H ++K G + ++G A
Sbjct: 90 AEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNA 149
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----N 314
L++ Y C + RV+D + + N++I L + R +DA +F + + N
Sbjct: 150 LVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPN 209
Query: 315 SISYNSMIKGYAVYGQVDDSKRL----FEKMPHRSIISLNTMISVIPEM----------- 359
S++++SM+ D K + I N +I + +
Sbjct: 210 SVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFN 269
Query: 360 ---ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
E+N V+WN+M++ + QN L A+ L M+ TF+ + AC+ +G L+
Sbjct: 270 QIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRP 329
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +HA ++T +++V +L DMY++CG +N A+ F IS + ++ L+ GYS
Sbjct: 330 GKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQ 388
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC--------------------------- 509
SE++ LF M + + + +++GV+SAC
Sbjct: 389 TTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFI 448
Query: 510 --------VRAGLVNEGMKIFRSMKS------------YGVVPTLEHYTCVVDLLGRSGH 549
++ G ++ K+FR + S YG++ L T ++L
Sbjct: 449 ANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGEL---TIAINLF----- 500
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
E +K+ +E D+V + A+LSAC +E G++ + M + KP + + +
Sbjct: 501 -----EAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMH--YACM 553
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS-RVHAF 649
+LG+ G + K + L ++ D L + R+H +
Sbjct: 554 VDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGY 594
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 202/443 (45%), Gaps = 57/443 (12%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ I N I ++G+ + A N+F+Q+ + +VSWN M+ +++ ++ LV
Sbjct: 242 ESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQ 301
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M N TF+ +L CA++ L GK+IH +++G FV + L YA C
Sbjct: 302 MQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGC 361
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+ A+RVF ++ +E+ ++++++GY Q S++ +F++M
Sbjct: 362 LNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGI---------------- 404
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
K +KL + ++ VI ACA L A +GK VHGL ++
Sbjct: 405 -----KGMKL------------DVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLF 447
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---- 310
I AL++FY C D A +V+ ++ + + NS+I G +G + A +F +
Sbjct: 448 IANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDG 507
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
E +S+SY +++ + G V++ K+ FE M + ++ + + M+
Sbjct: 508 VEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQ-------------VQNIKPTQMHYACMV 554
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPF 429
+ L E+A++L + L I+ + + L AC G ++ HL K P
Sbjct: 555 DLLGRAGLIEEAVKL---IESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQ 611
Query: 430 ESNVYVGTSLVDMYSRCGSINDA 452
S Y + L +MY+ G ++A
Sbjct: 612 HSGYY--SVLSNMYAEAGKWDEA 632
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 137/283 (48%), Gaps = 29/283 (10%)
Query: 7 QSQTLMTQETLIVSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKF 65
++ + T ++ + + A+T+ + G L AR +F ++ +R VS+N ++ GYS+
Sbjct: 334 HARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNC 392
Query: 66 DESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
ESL L M +KL+ ++ ++S CA L +L GK++H L ++ F+ + L
Sbjct: 393 SESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANAL 452
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
L FY C I+ A +VF ++ + W+ M++GY ++ A ++F M K+D V +
Sbjct: 453 LDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAM-KEDGVEYD 511
Query: 186 KLISGYAKSVDGC------EKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEG- 237
+ Y + C E+ K F M+ +N+ P + + ++ R G E
Sbjct: 512 SV--SYIAVLSACSHGGLVEEGKKYFEHMQV--QNIKPTQMHYACMVDLLGRAGLIEEAV 567
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
K++ L I E D ++ GAL+ GA R++ +E
Sbjct: 568 KLIESLPI----EPDANVWGALL----------GACRIHGYIE 596
>gi|125602089|gb|EAZ41414.1| hypothetical protein OsJ_25936 [Oryza sativa Japonica Group]
Length = 1165
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 206/648 (31%), Positives = 317/648 (48%), Gaps = 51/648 (7%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T GR G+L A+ LFDQMP R V+SW +L Y+ + + M R N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 82 LNETTFSTIL---------------------SVCAQLNSLIDGKQIHCLVL---KSGYEC 117
S L S A ++ L + +H L + ++
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVYEEMPWQW 161
Query: 118 FEFVGS-GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM 176
+ VGS L+ Y E+ A RVF+ + + + WS M+ G + +S+A VF M
Sbjct: 162 RDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAM 221
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
P+++VV WT +I GY K C L LF MR G + N T + ACA E
Sbjct: 222 PERNVVSWTSMIRGYVKR-GMCRDGLLLFLNMRREGVQV-NTTTLSVALDACAAASLARE 279
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
G +H L+I GFE D +G ++I Y A R +D ++ + + NSLI G +
Sbjct: 280 GIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQ 339
Query: 297 MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+E+A ++F + + +++S+ SM+ G+A G + +S LFE+MP
Sbjct: 340 HDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMP-------------- 385
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
++ V W ++IS ++ N + A++ + M + FS L A + L L Q
Sbjct: 386 ---VKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQ 442
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ HA+ + + + V TSLV MY++CG + +A FSSIS+P++ A +++ +
Sbjct: 443 GRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQ 502
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLE 535
HG +A+ LF M PN TF+G+L+ C RAG V +G F SM+ YGV P E
Sbjct: 503 HGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPE 562
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
HYTC+VDLLGR+G L EA E I MP + W ALLSA N+ + AAQK+
Sbjct: 563 HYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEK 622
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELN 643
D +AY +LS +++ G ++M +L++L + SW +LN
Sbjct: 623 DPYDATAYTVLSRMFSSAGMEDEEMLKVVQLSNLAM------SWKKLN 664
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 214/464 (46%), Gaps = 51/464 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S + + ++G + AR +FD MP R VVSW +M+ GY K + L L M R
Sbjct: 195 VISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRR 254
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V++N TT S L CA + +G QIH L++ G+E F+G ++ Y+ + +
Sbjct: 255 EGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVD 314
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA----- 192
AKR FD + + + + W+ ++ GYVQ +++ +A +F M +KD V WT ++ G+A
Sbjct: 315 AKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWM 374
Query: 193 -KSVDGCEKA---------------------LKLFRWM-RESGEN-MPNEYTFDSVIRAC 228
+SV+ E+ L RW R S E PN F ++ A
Sbjct: 375 RESVELFEQMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSAL 434
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A L +G+ H I G+ FD ++ +L+ Y C A V+ + NP L A N
Sbjct: 435 ASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAIN 494
Query: 289 SLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
S+I + G +EDA +F ++ A N +++ ++ G A G V FE M R
Sbjct: 495 SMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESM--R 552
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
+ + E NP + M+ + L +AL++ +M + + ++ L
Sbjct: 553 PVYGV----------EPNPEHYTCMVDLLGRAGLLAEALEMINSMPQ---NDHSDAWAAL 599
Query: 405 FHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRCG 447
A S +L ++ L+ K P+++ Y T L M+S G
Sbjct: 600 LSASSLHSNLAFAKIAAQKLLEKDPYDATAY--TVLSRMFSSAG 641
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 100/259 (38%), Gaps = 36/259 (13%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
Q+ IVS N IT ++ + A LF M + VSW +M+ G++ ES+ L
Sbjct: 323 QQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFE 382
Query: 74 T-------------------------------MHRSNVKLNETTFSTILSVCAQLNSLID 102
M + K N FS +LS A L L
Sbjct: 383 QMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQ 442
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
G+Q H + G+ V + L+ YA C + EA VF + + + + M+ +VQ
Sbjct: 443 GRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQ 502
Query: 163 CNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
+ DA +F KM K + V + +++G A++ ++ F MR PN
Sbjct: 503 HGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARA-GFVQQGYNYFESMRPVYGVEPNP 561
Query: 219 YTFDSVIRACARLGAFCEG 237
+ ++ R G E
Sbjct: 562 EHYTCMVDLLGRAGLLAEA 580
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/613 (32%), Positives = 309/613 (50%), Gaps = 60/613 (9%)
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
++ FS++L L QIH ++ SG F+ + + N EI A++VFD
Sbjct: 71 DSFFSSLLDHSVHKRHL---NQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFD 127
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
E E + LW+ ++ GY N DA +++ +
Sbjct: 128 EFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSR---------------------------- 159
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
M+ SG N P+ +T V++AC+ + GK VHG + + GFE D + L+ Y
Sbjct: 160 ----MQASGVN-PDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALY 214
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS----ISYN 319
C + A V++ L++ + + S+I+G G +A IF ++ + N I+
Sbjct: 215 AKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALV 274
Query: 320 SMIKGYAVYGQVDDSKRL--------FEKMPHRSIISLNTMI----------SVIPEME- 360
S+++ Y ++ K + E P +ISL M S +ME
Sbjct: 275 SVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDL-LISLTAMYAKCGQVMVARSFFDQMEI 333
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
N + WN+MISGY +N +A+ L+ M I T AC+ +GSL + +
Sbjct: 334 PNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWM 393
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
++ KT + ++V+V T+L+DM+++CGS++ A+ F +V W+A++ GY HG G
Sbjct: 394 GDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRG 453
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
+A+ LF M + + PN TFVG+L+AC +GLV EG ++F SMK YG+ +HY CV
Sbjct: 454 QDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACV 513
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
VDLLGRSGHL+EA +FI MPIE VWGALL AC + ++ +GE AA+++F LD
Sbjct: 514 VDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNT 573
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
YV LSN+YA W +R + + KD G S IE+N ++ AF V D+++P
Sbjct: 574 GHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFK 633
Query: 661 VIYATLEHLTANL 673
I+ LE L L
Sbjct: 634 EIFEELESLERRL 646
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 218/478 (45%), Gaps = 59/478 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ AR +FD+ P +V WN ++ GYS F +++ + S M S V + T +L
Sbjct: 117 GEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVL 176
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ + L GK++H + + G+E FV +GL+ YA C +E+A+ VF+ L + N +
Sbjct: 177 KACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIV 236
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY Q L +A +F +M +++V
Sbjct: 237 SWTSMISGYGQNGLPMEALRIFGQMRQRNV------------------------------ 266
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+ SV+RA + +GK +HG ++K G EF+ + +L Y C
Sbjct: 267 ---KPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMV 323
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIKGYAV 327
A +D++E P + N++I+G G +A +F + N SI+ S I A
Sbjct: 324 ARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQ 383
Query: 328 YGQVDDSKRL---FEKMPHRSIISLNT-MISVIPE--------------MERNPVTWNSM 369
G +D +K + K +R+ + +NT +I + + ++++ V W++M
Sbjct: 384 VGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAM 443
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
I GY + + A+ L+ M++ + TF L AC+ G +++G L +
Sbjct: 444 IVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGI 503
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG---YSHHGLGSEA 483
E+ +VD+ R G +N+A +++ P V+ W AL+ Y H LG A
Sbjct: 504 EARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYA 561
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 12/251 (4%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+ L++S +CG Q++ AR+ FDQM I V+ WN M+ GY+K +E++ L
Sbjct: 304 EPDLLISLTAMYAKCG---QVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQ 360
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M N++ + T + + CAQ+ SL K + + K+ Y FV + L+ +A C
Sbjct: 361 EMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCG 420
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV----VVWTKLIS 189
++ A+ VFD + + ++WS M+VGY DA D+F M + V V + L++
Sbjct: 421 SVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLT 480
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
S E+ +LF M+ G +++ + V+ R G E + +
Sbjct: 481 ACNHS-GLVEEGWELFHSMKYYGIEARHQH-YACVVDLLGRSGHLNEA---YDFITTMPI 535
Query: 250 EFDESIGGALI 260
E S+ GAL+
Sbjct: 536 EPGVSVWGALL 546
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/654 (29%), Positives = 315/654 (48%), Gaps = 99/654 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N I R G + AR F+ MP+RT S+N +L GY + D +L + M
Sbjct: 17 VVDANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPT 76
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ A N+LI G + L +
Sbjct: 77 RDL--------------ASYNALISGLSLRRHTLPDAAAALATIP--------------- 107
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY--AKSV 195
+ + + ++ +L GYV+ L++DA +F +MP+++ + +T L+ G+ A V
Sbjct: 108 --------YPPSVVSFTSLLRGYVRHGLLADAIQLFRQMPERNHISYTVLLGGFLDAGRV 159
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE-GKVVHGLLIKCGFEFDES 254
D +A KLF + MP + V+ A L +C+ G+V
Sbjct: 160 D---EARKLF-------DEMPAK----DVVAWTAMLSGYCQVGRV--------------- 190
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
D A ++D + + + ++++G G++ A +F + E N
Sbjct: 191 ---------------DEARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPERN 235
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-E 360
+S+ +M+ GY G+++D++ LF MP + + N MI SV M E
Sbjct: 236 EVSWTAMLFGYIQAGRIEDAEELFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCE 295
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
R+ TW+++I Y QN +AL + M + I + + C+ L L G+ +
Sbjct: 296 RDDGTWSAIIKAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREV 355
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H +++ F+ ++Y ++L+ MY +CG+++ A+ F +V W +++ GY+ HGLG
Sbjct: 356 HGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLG 415
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY-GVVPTLEHYTC 539
EA+ +F+ M +VP+ T++G L+AC G V EG IF SM++ G+ P LEHY C
Sbjct: 416 EEALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYAC 475
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
+VDLLGR+G + EA IK MP+E DAV+WGAL+ AC N E+ E +A+K+ L+
Sbjct: 476 MVDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMGACRMHKNAEIAEISAKKLLELEPGN 535
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
YV+LS+IY G+W ++RK ++ + K GCSWIE + RVH F D
Sbjct: 536 AGPYVLLSHIYTSSGRWEDASNMRKFISSRHLNKSLGCSWIEYDKRVHLFKSGD 589
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 146/311 (46%), Gaps = 33/311 (10%)
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
P + +N+ I L G +E A F + + SYN+++ GY D + R+F +
Sbjct: 14 TPAVVDANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHR 73
Query: 341 MPHRSIISLNTMIS-------VIPE-------MERNP--VTWNSMISGYVQNNLHEKALQ 384
MP R + S N +IS +P+ + P V++ S++ GYV++ L A+Q
Sbjct: 74 MPTRDLASYNALISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQ 133
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
L+ M +R +++VL G + + + L + +V T+++ Y
Sbjct: 134 LFRQM----PERNHISYTVLLGGFLDAGRVDEARKLFDEMPA----KDVVAWTAMLSGYC 185
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+ G +++A+ F + NV +WTA+++GY+ +G + A LFE+M E+ N ++
Sbjct: 186 QVGRVDEARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPER----NEVSWTA 241
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
+L ++AG + + ++F +M + L ++ G+ G + A+ M E
Sbjct: 242 MLFGYIQAGRIEDAEELFNAMPDH----PLAACNGMIVGFGQQGMVDAAKSVFDRM-CER 296
Query: 565 DAVVWGALLSA 575
D W A++ A
Sbjct: 297 DDGTWSAIIKA 307
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 203/663 (30%), Positives = 340/663 (51%), Gaps = 63/663 (9%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-- 79
N ++ G +G + A LFD MP R +VSWN+M+ +S +ES L+ M N
Sbjct: 581 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 640
Query: 80 --VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ T T+L VCA+ + GK +H +K
Sbjct: 641 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK------------------------- 675
Query: 138 AKRVFDELHEDNELLWSLMLVG-YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
L D EL+ + L+ Y +C +++A +F K+VV W ++ G++ D
Sbjct: 676 -------LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 728
Query: 197 GCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+ R M GE++ +E T + + C K +H +K F ++E +
Sbjct: 729 -THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 787
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING----------LISMGRIEDAEL 305
A + Y C + A RV+ + + +N+ N+LI G L + +++ + L
Sbjct: 788 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 847
Query: 306 IFNRLTEANSISYNSMIK----GYAVYGQVDDSKRLFEKMPHRSIISLN-------TMIS 354
+ + T + +S S +K G V+G + + + + S++SL T+ +
Sbjct: 848 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQA 907
Query: 355 VIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
+ ME ++ V+WN++I+GY+QN ++AL ++ M I + +F ACS L S
Sbjct: 908 LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 967
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L+ G+ HA+ +K E + ++ SL+DMY++ GSI + F+ + + A+W A++ G
Sbjct: 968 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 1027
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVP 532
Y HGL EA+ LFE M P+ TF+GVL+AC +GL++EG++ MK S+G+ P
Sbjct: 1028 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 1087
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFI-KDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
L+HY CV+D+LGR+G L +A + ++M E D +W +LLS+C N+E+GE+ A K
Sbjct: 1088 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 1147
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+F L+ + YV+LSN+YA LGKW +R+R+ + ++KD GCSWIELN +V +F V
Sbjct: 1148 LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVV 1207
Query: 652 EDR 654
+R
Sbjct: 1208 GER 1210
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/600 (20%), Positives = 247/600 (41%), Gaps = 101/600 (16%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL-SLVSTMHRSNV 80
+ IT G +R +FD + + + WN ++ YS+ +DE L + + + +++
Sbjct: 479 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 538
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ T+ ++ CA ++ + G +H LV+K+G FVG+ L+ FY + +A +
Sbjct: 539 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 598
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+FD MP++++V W +I ++ + E
Sbjct: 599 LFD-------------------------------IMPERNLVSWNSMIRVFSDNGFSEES 627
Query: 201 ALKLFRWMRESGEN--MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
L L M E+G+ MP+ T +V+ CAR GK VHG +K + + + A
Sbjct: 628 FLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNA 687
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI--------------EDA- 303
L++ Y C A ++ N + + N+++ G + G ED
Sbjct: 688 LMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK 747
Query: 304 ---------------ELIFNRLTEA-----------NSISYNSMIKGYAVYGQVDDSKRL 337
E L E N + N+ + YA G + ++R+
Sbjct: 748 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 807
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
F + +++ S WN++I G+ Q+N +L ++ M+ +
Sbjct: 808 FHGIRSKTVNS-----------------WNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 850
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
T L ACS L SL+ G+ +H +++ E +++V S++ +Y CG + QA F
Sbjct: 851 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 910
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
++ ++ +W ++ GY +G A+ +F M+ I + + V AC +
Sbjct: 911 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS----LLP 966
Query: 518 GMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+++ R +Y + LE + +D+ ++G + ++ + + E W A++
Sbjct: 967 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMI 1025
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 180/400 (45%), Gaps = 45/400 (11%)
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
++++L + ++ Y C D+ VF + K++ W +IS Y+++ + ++ L+ F
Sbjct: 473 NDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRN-ELYDEVLETFIE 531
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M + + +P+ +T+ VI+ACA + G VHGL++K G D +G AL+ FY G
Sbjct: 532 MISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY-GTH 590
Query: 268 AF-DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS----------- 315
F A++++D + L + NS+I G E++ L+ + E N
Sbjct: 591 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 650
Query: 316 ------------ISYNSMIKGYAVYGQVDDSKRLFEK-MPHRSIISLNTMISVIPEM--E 360
I + G+AV ++D L M S T +I +M
Sbjct: 651 VTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNN 710
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL------FHACSCLGSL 414
+N V+WN+M+ G+ + M D ++L FH S L SL
Sbjct: 711 KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHE-SFLPSL 769
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
++ LH + +K F N V + V Y++CGS++ AQ F I S V +W AL+ G
Sbjct: 770 KE---LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG- 825
Query: 475 SHHGLGSEAVLLFEIMLEQDI---VPNAATFVGVLSACVR 511
H ++ L + L+ I +P++ T +LSAC +
Sbjct: 826 --HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 863
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 287/575 (49%), Gaps = 89/575 (15%)
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESG 212
S ++ Y + + ++ A VF M ++D V+W ++SG K + C ++A+ +F M + G
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVK--NSCFDEAILIFGDMVKGG 202
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+ T +V+ A L G + L +K GF + L Y C
Sbjct: 203 IGF-DSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC------ 255
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD 332
G IE A L+F ++ + + +SYN+MI GY + +
Sbjct: 256 -------------------------GEIETARLLFGQIGQPDLVSYNAMISGYTCNNETE 290
Query: 333 DSKRLF-------EKMPHRSII-----------------------------------SLN 350
S RLF EK+ SI+ +L
Sbjct: 291 SSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALT 350
Query: 351 TMISVIPEME-----------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
T+ S + E+E ++ +WN+MISGY QN L EKA+ L+ M+K +
Sbjct: 351 TVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPV 410
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T + + AC+ LG+L G+ +H + + FESN++V T+L+DMY++CGSI +AQ FS +
Sbjct: 411 TVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMM 470
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
N W A+++GY HG G EA+ LF ML + P TF+ VL AC AGLV EG
Sbjct: 471 PEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGD 530
Query: 520 KIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
+IFRSM +G P EHY C+VDLLGR+G+L +A +FI+ MP+E VWGALL AC
Sbjct: 531 EIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMI 590
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
+ + A+ K+F LD + + YV+LSNIY+ + + +R + ++ K PGC+
Sbjct: 591 HKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCT 650
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
IE+ + +H F+ D+++P IYA LE LT +
Sbjct: 651 LIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKM 685
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 128/522 (24%), Positives = 210/522 (40%), Gaps = 93/522 (17%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
++ AR +FD M R V WNTM+ G K + FDE++ + M + + + TT + +L
Sbjct: 156 RVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLP 215
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
A+L L G I CL +K G+ +V +GL Y+ C EIE A+ +F ++ +
Sbjct: 216 GVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQ----- 270
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
D+V + +ISGY + + E +++LF+ + SG
Sbjct: 271 --------------------------PDLVSYNAMISGYTCN-NETESSVRLFKELLVSG 303
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
E + N + +I G + +HG K G + S+ AL Y + A
Sbjct: 304 EKV-NSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESA 362
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT--------------------- 311
++D L + N++I+G G E A +F +
Sbjct: 363 RLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQL 422
Query: 312 ------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
E+N ++I YA G + +++RLF MP
Sbjct: 423 GALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP----------- 471
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
E+N VTWN+MISGY + +AL L+ M + T TF + +ACS G
Sbjct: 472 ------EKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGL 525
Query: 414 LQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
+++G + +V FE +VD+ R G+++ A + P W AL+
Sbjct: 526 VREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALL 585
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
H + A L + + E D P + +LS AG
Sbjct: 586 GACMIHKDANLARLASDKLFELD--PQNVGYYVLLSNIYSAG 625
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 193/428 (45%), Gaps = 31/428 (7%)
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
+F +P D+ ++ LI ++ + + A+ L+ +R+S P+ +T+ VI + L
Sbjct: 64 LFSTIPNPDLFLYNVLIRAFSLN-NSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSL 122
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
G I GF D +G A++ Y A +V+D + N+++
Sbjct: 123 GLGLLLHAHS---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMV 179
Query: 292 NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM---------- 341
+GL+ ++A LIF + + I ++S AV V + + L M
Sbjct: 180 SGLVKNSCFDEAILIFGDMVKGG-IGFDSTTVA-AVLPGVAELQDLALGMGIQCLAMKVG 237
Query: 342 --PHRSIIS-LNTMISVIPEMER-----------NPVTWNSMISGYVQNNLHEKALQLYM 387
H +I+ L + S E+E + V++N+MISGY NN E +++L+
Sbjct: 238 FHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFK 297
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
+ S+ L G L + +H K+ SN V T+L +YSR
Sbjct: 298 ELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLN 357
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
I A+ F S ++A+W A+++GY+ +GL +A+ LF+ M + ++ PN T +LS
Sbjct: 358 EIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILS 417
Query: 508 ACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
AC + G ++ G + + + T ++D+ + G + EA+ MP E +AV
Sbjct: 418 ACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAV 476
Query: 568 VWGALLSA 575
W A++S
Sbjct: 477 TWNAMISG 484
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 64/315 (20%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ TAR LF Q+ +VS+N M+ GY+ + + S+ L + S K+N ++ ++
Sbjct: 256 GEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLI 315
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
V L + IH KSG V + L Y+ EIE A+ +FDE E +
Sbjct: 316 PVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLA 375
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY Q L EKA+ LF+ M++
Sbjct: 376 SWNAMISGYAQNGL--------------------------------TEKAISLFQEMQKC 403
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
E PN T S++ ACA+LGA GK VH L+ + FE + + ALI+ Y C
Sbjct: 404 -EVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKC----- 457
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
G I +A+ +F+ + E N++++N+MI GY ++G
Sbjct: 458 --------------------------GSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYG 491
Query: 332 DDSKRLFEKMPHRSI 346
++ LF +M H +
Sbjct: 492 HEALNLFNEMLHSRV 506
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 34/222 (15%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R ++ +AR LFD+ +++ SWN M+ GY++ ++++SL M + V+ N T ++
Sbjct: 355 RLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTS 414
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
ILS CAQL +L GK +H L+ + +E FV + L+ YA C I EA+R+F + E N
Sbjct: 415 ILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKN 474
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ GY + GY +AL LF M
Sbjct: 475 AVTWNAMISGYG--------------------------LHGYG------HEALNLFNEML 502
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFE 250
S + P TF SV+ AC+ G EG ++ ++ GFE
Sbjct: 503 HSRVS-PTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFE 543
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ I + I + G + A+ LF MP + V+WN M+ GY E+L+L +
Sbjct: 441 ESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNE 500
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQI-HCLVLKSGYE 116
M S V TF ++L C+ + +G +I +V G+E
Sbjct: 501 MLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFE 543
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 9/189 (4%)
Query: 336 RLFEKMPH-RSIISLNTMISVIPEMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+L K+ H ++I + + S IP NP +N +I + NN A+ LY +RK
Sbjct: 47 KLTHKLSHLKAIDQASLLFSTIP----NPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRK- 101
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ F+ F L +V F S+++VG+++V Y + + A
Sbjct: 102 STPLEPDNFTYAFVISGASSLGLGLLLHAHSIVAG-FGSDLFVGSAIVACYFKFSRVAAA 160
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ F + + W +++G + EA+L+F M++ I ++ T VL
Sbjct: 161 RKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAEL 220
Query: 513 GLVNEGMKI 521
+ GM I
Sbjct: 221 QDLALGMGI 229
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 198/667 (29%), Positives = 332/667 (49%), Gaps = 60/667 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + +F+ MP + VV+W ++L G + E ++L M + N TF+++L
Sbjct: 149 GSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVL 208
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S A +L G+++H +K G FV + L+ YA
Sbjct: 209 SAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYA--------------------- 247
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRE 210
+C L+ DA VF M +D+V W L++G ++ CE +AL+LF R
Sbjct: 248 ----------KCGLVEDAKSVFNWMETRDMVSWNTLMAGL--QLNECELEALQLFHESRA 295
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+ M + T+ +VI+ CA L + +H ++K GF ++ AL + Y C
Sbjct: 296 TMGKM-TQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELA 354
Query: 271 GAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGY 325
A+ ++ S ++I+G I G I A ++F+R+ E N +Y++M+K
Sbjct: 355 DALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKAS 414
Query: 326 ------AVYGQVDDSKRLFEKMP---------HRSIISLNTMISVIPEME-RNPVTWNSM 369
++ QV K ++ +P + S +S+ +E ++ V W++M
Sbjct: 415 LSILPPQIHAQV--IKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAM 472
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS-LQQGQLLHAHLVKTP 428
+S + Q E A L+ M I T S + AC+C + + QG+ HA +K
Sbjct: 473 LSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYR 532
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
+ + V ++LV MYSR G+I+ AQ F + ++ +W ++++GY+ HG +A+ F
Sbjct: 533 YHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFR 592
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
M I + TF+ V+ C GLV EG + F SM + + + PT+EHY C+VDL R+
Sbjct: 593 QMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRA 652
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L E I+DMP A+VW LL AC N+E+G+ +A K+ L+ S YV+LS
Sbjct: 653 GKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLS 712
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NIYA GKW ++ ++RK + + +VKK+ GCSWI++ ++VH+F D+++P + IY L+
Sbjct: 713 NIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLK 772
Query: 668 HLTANLN 674
+ L
Sbjct: 773 VIITRLK 779
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 196/425 (46%), Gaps = 32/425 (7%)
Query: 175 KMPKKDVVVWT-KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
++P++D V +++ YA+ E L F R G + + T V++AC +
Sbjct: 57 EIPRRDAAVGANRVLFDYARRGMVLE-VLDQFSVARRGGV-LVDSATLSCVLKACRSVPD 114
Query: 234 FCEGKVVHGLLIKCGFEFDE-SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
G+ +H L +KCG + E S G +L++ Y C + + V++ + + SL+
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174
Query: 293 GLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKMP----HR 344
G + +F R+ N ++ S++ A G +D +R+ +
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234
Query: 345 SIISLNTMI-------------SVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
S+ N+++ SV ME R+ V+WN++++G N +ALQL+ R
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESR 294
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
T+ST++ + C+ L L + LH+ ++K F V T+L D YS+CG +
Sbjct: 295 ATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELA 354
Query: 451 DAQASFS-SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
DA FS + S NV +WTA+++G +G AV+LF M E ++PN T+ +L A
Sbjct: 355 DALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKAS 414
Query: 510 VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
+ ++ ++ +Y +P + T ++ + G +A K M + D V W
Sbjct: 415 LSILPPQIHAQVIKT--NYQHIPFVG--TALLASYSKFGSTEDALSIFK-MIEQKDVVAW 469
Query: 570 GALLS 574
A+LS
Sbjct: 470 SAMLS 474
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 43/76 (56%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G + +A+ +F++ R +VSWN+M+ GY++ +++ M S ++++ TF
Sbjct: 549 RKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLA 608
Query: 90 ILSVCAQLNSLIDGKQ 105
++ C +++G+Q
Sbjct: 609 VIMGCTHNGLVVEGQQ 624
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 198/667 (29%), Positives = 332/667 (49%), Gaps = 60/667 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + +F+ MP + VV+W ++L G + E ++L M + N TF+++L
Sbjct: 149 GSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVL 208
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S A +L G+++H +K G FV + L+ YA
Sbjct: 209 SAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYA--------------------- 247
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRE 210
+C L+ DA VF M +D+V W L++G ++ CE +AL+LF R
Sbjct: 248 ----------KCGLVEDAKSVFNWMETRDMVSWNTLMAGL--QLNECELEALQLFHESRA 295
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+ M + T+ +VI+ CA L + +H ++K GF ++ AL + Y C
Sbjct: 296 TMGKM-TQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELA 354
Query: 271 GAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGY 325
A+ ++ S ++I+G I G I A ++F+R+ E N +Y++M+K
Sbjct: 355 DALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKAS 414
Query: 326 ------AVYGQVDDSKRLFEKMP---------HRSIISLNTMISVIPEME-RNPVTWNSM 369
++ QV K ++ +P + S +S+ +E ++ V W++M
Sbjct: 415 LSILPPQIHAQV--IKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAM 472
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS-LQQGQLLHAHLVKTP 428
+S + Q E A L+ M I T S + AC+C + + QG+ HA +K
Sbjct: 473 LSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYR 532
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
+ + V ++LV MYSR G+I+ AQ F + ++ +W ++++GY+ HG +A+ F
Sbjct: 533 YHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFR 592
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRS 547
M I + TF+ V+ C GLV EG + F SM + + + PT+EHY C+VDL R+
Sbjct: 593 QMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRA 652
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L E I+DMP A+VW LL AC N+E+G+ +A K+ L+ S YV+LS
Sbjct: 653 GKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLS 712
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NIYA GKW ++ ++RK + + +VKK+ GCSWI++ ++VH+F D+++P + IY L+
Sbjct: 713 NIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLK 772
Query: 668 HLTANLN 674
+ L
Sbjct: 773 VIITRLK 779
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 197/425 (46%), Gaps = 32/425 (7%)
Query: 175 KMPKKDVVVWT-KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
++P++D V +++ YA+ + L F R G + + T V++AC +
Sbjct: 57 EIPRRDAAVGANRVLFDYARR-GMVPEVLDQFSVARRGGV-LVDSATLSCVLKACRSVPD 114
Query: 234 FCEGKVVHGLLIKCGFEFDE-SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
G+ +H L +KCG + E S G +L++ Y C + + V++ + + SL+
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174
Query: 293 GLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKMP----HR 344
G + +F R+ N ++ S++ A G +D +R+ +
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234
Query: 345 SIISLNTMI-------------SVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
S+ N+++ SV ME R+ V+WN++++G N +ALQL+ R
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESR 294
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
T+ST++ + C+ L L + LH+ ++K F V T+L D YS+CG +
Sbjct: 295 ATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELA 354
Query: 451 DAQASFS-SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
DA FS + S NV +WTA+++G +G AV+LF M E ++PN T+ +L A
Sbjct: 355 DALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKAS 414
Query: 510 VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
+ ++ ++ +Y +P++ T ++ + G +A K M + D V W
Sbjct: 415 LSILPPQIHAQVIKT--NYQHIPSVG--TALLASYSKFGSTEDALSIFK-MIEQKDVVAW 469
Query: 570 GALLS 574
A+LS
Sbjct: 470 SAMLS 474
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 43/76 (56%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G + +A+ +F++ R +VSWN+M+ GY++ +++ M S ++++ TF
Sbjct: 549 RKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLA 608
Query: 90 ILSVCAQLNSLIDGKQ 105
++ C +++G+Q
Sbjct: 609 VIMGCTHNGLVVEGQQ 624
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 206/693 (29%), Positives = 339/693 (48%), Gaps = 98/693 (14%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
R G A+N+F+QM +R VVS N ++ G K + + + + M + V +N ++
Sbjct: 328 ARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYV 386
Query: 89 TILSVCAQLNSLIDGK----QIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEAKRVFD 143
+LS ++ + L +G+ ++H V+++G + +G+GL+ YA
Sbjct: 387 VLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYA------------- 433
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ ++DA VF M +KD V W LISG ++ + E A +
Sbjct: 434 ------------------KSGAIADACSVFELMVEKDSVSWNSLISGLDQN-ECSEDAAE 474
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
F MR +G +MP+ +T S + +CA LG G+ +H +K G + D S+ AL+ Y
Sbjct: 475 SFHRMRRTG-SMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALY 533
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLI-SMGRIEDAELIF--------------- 307
F ++V+ + + NS+I L S + A F
Sbjct: 534 AETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTF 593
Query: 308 -NRLTEANSISY-----------------------NSMIKGYAVYGQVDDSKRLFEKMPH 343
N L+ +S+S N+++ Y G++++ +++F +M
Sbjct: 594 INILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSE 653
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
R+ V+WNSMISGY+ N L KA+ L M + TF+
Sbjct: 654 ----------------TRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFAT 697
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ AC+ + +L++G +HA ++ ES+V VG++LVDMYS+CG I+ A F + N
Sbjct: 698 ILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRN 757
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V +W ++++GY+ HG G +A+ LF M+ P+ TFVGVLSAC G V EG + F+
Sbjct: 758 VYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFK 817
Query: 524 SMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF--WM 580
SM Y + P +EH++C+VDLLGR+G L E +FI MP++ + ++W +L AC
Sbjct: 818 SMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGR 877
Query: 581 NMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWI 640
N E+G RAA+ + L+ + YV+L+N+YA KW R + VKK+ GCSW+
Sbjct: 878 NTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWV 937
Query: 641 ELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ VH F D+ +P ++IY L L +
Sbjct: 938 TMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKM 970
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 137/604 (22%), Positives = 256/604 (42%), Gaps = 78/604 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G L +A+ LFD+M R +V+W ++ GY++ K DE+ + M R+ N F +
Sbjct: 118 RIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGS 177
Query: 90 ILSVCAQ--LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
L C + + G QIH L+ K+ Y V + L+ Y +C +
Sbjct: 178 ALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDS------------ 225
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
+DA VF + ++ + W +IS Y++ D A LF
Sbjct: 226 ------------------ANDARSVFDGIGIRNSISWNSIISVYSRRGDAV-SAYDLFSS 266
Query: 208 MRESGENM---PNEYTFDSVIR-ACARLG-AFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
M++ G PNEYTF S+I AC+ + C + + + K GF D + AL+
Sbjct: 267 MQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSG 326
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE---ANSISYN 319
+ D A +++++ + + N L+ GL+ + E A +F+ + + NS SY
Sbjct: 327 FARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYV 386
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISL----------NTMISVIPE----------- 358
++ ++ + +++ +R ++ H +I N ++++ +
Sbjct: 387 VLLSAFSEFSVLEEGRRKGREV-HAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVF 445
Query: 359 ---MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
+E++ V+WNS+ISG QN E A + + MR+ + T +C+ LG +
Sbjct: 446 ELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIM 505
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G+ +H +K +++V V +L+ +Y+ G + FS + + +W +++ S
Sbjct: 506 LGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALS 565
Query: 476 HHGLG-SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
S+AV F M+ + TF+ +LSA L +I + Y +
Sbjct: 566 DSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDT 625
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC-----------WFWMNME 583
++ G+ G ++E E+ M D V W +++S W M+
Sbjct: 626 AIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQ 685
Query: 584 VGER 587
G+R
Sbjct: 686 KGQR 689
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 211/480 (43%), Gaps = 74/480 (15%)
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
N L + ++ YV+ + A +F +M +++V W LISGY ++ ++A FR M
Sbjct: 105 NLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQN-GKPDEACARFRDM 163
Query: 209 RESGENMPNEYTFDSVIRACARLG-AFCE-GKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
+G +PN Y F S +RAC G + C+ G +HGL+ K + D + LI Y C
Sbjct: 164 VRAG-FIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSC 222
Query: 267 -EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL--------------- 310
++ + A V+D + + NS+I+ G A +F+ +
Sbjct: 223 LDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYT 282
Query: 311 ------TEANSISY------------------------NSMIKGYAVYGQVDDSKRLFEK 340
T +S+ + ++++ G+A +G DD+K +FE+
Sbjct: 283 FGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQ 342
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
M R+++S+ N ++ G V+ E A +++ M+ L + +
Sbjct: 343 MGVRNVVSM-----------------NGLMVGLVKQKQGEAAAKVFHEMKDL-VGINSDS 384
Query: 401 FSVLFHACSCLGSLQQGQL----LHAHLVKTPFESN-VYVGTSLVDMYSRCGSINDAQAS 455
+ VL A S L++G+ +HAH+++T N V +G LV+MY++ G+I DA +
Sbjct: 385 YVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSV 444
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F + + +W +L++G + +A F M +P+ T + LS+C G +
Sbjct: 445 FELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWI 504
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G +I G+ + ++ L +G E + MP E D V W +++ A
Sbjct: 505 MLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP-EYDQVSWNSVIGA 563
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/480 (22%), Positives = 200/480 (41%), Gaps = 63/480 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N + ++G + A ++F+ M + VSWN+++ G + +++ M R+
Sbjct: 426 NGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSM 485
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA--NCFEIEEAK 139
+ T + LS CA L ++ G+QIHC LK G + V + LL YA CF
Sbjct: 486 PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCF------ 539
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
++ VF MP+ D V W +I + S
Sbjct: 540 ---------------------------TECLKVFSLMPEYDQVSWNSVIGALSDSEASVS 572
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+A+K F M G + + TF +++ A + L +H L++K D +IG AL
Sbjct: 573 QAVKYFLQMMRGGWGL-SRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNAL 631
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDA-ELIFNRLTEA---N 314
+ Y C + +++ R+ S NS+I+G I + A +L++ + + +
Sbjct: 632 LSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLD 691
Query: 315 SISYNSMIKGYAVYGQVDDSKRLF----------EKMPHRSIISLNTMISVIPEMER--- 361
S ++ +++ A ++ + + + +++ + + I R
Sbjct: 692 SFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFE 751
Query: 362 -----NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
N +WNSMISGY ++ EKAL+L+ M TF + ACS +G +++
Sbjct: 752 LMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEE 811
Query: 417 GQLLHAHLVKTPFESNVYVG--TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG 473
G H + + + V + +VD+ R G +++ +S+ PNV W ++
Sbjct: 812 G-FEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGA 870
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%)
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
++ + LH +K F N+++ +L+++Y R G + AQ F +S+ N+ W L++GY
Sbjct: 88 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 147
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
+ +G EA F M+ +PN F L AC +G
Sbjct: 148 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/544 (33%), Positives = 295/544 (54%), Gaps = 35/544 (6%)
Query: 160 YVQCNLMSDAFDVFIKMPKK-DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
Y +CN M+ A +F + +V + +ISG+ + E+ + ++ MR G MP++
Sbjct: 2 YSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITN-GFPEEGFEFYQKMRNEGV-MPDK 59
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
+TF I+AC + E K +HGLL K G E D IG AL+ Y + A ++
Sbjct: 60 FTFPCAIKACLDV---LEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEE 116
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG----YAVYGQVDDS 334
L + N+++NG +G+ E F R+ + + + + G +AV G +++
Sbjct: 117 LPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNG 176
Query: 335 KRLFE---KMPHRSIISL-NTMISV------------IPEM--ERNPVTWNSMISGYVQN 376
+ + KM + S +++ N++I + I EM E++ +WNS+ S + Q
Sbjct: 177 RIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQC 236
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE------ 430
H+ L+L M I T + + ACS L +L G+ +H +++ +
Sbjct: 237 GDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDI 296
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+V + +++DMY++CGS+ DA F + + +VA+W ++ GY HG G+EA+ +F M
Sbjct: 297 DDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRM 356
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGH 549
E + P+ TFVGVLSAC AG V++G MKS Y V PT+EHYTCV+D+LGR+G
Sbjct: 357 CEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQ 416
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
L EA E MPIE + VVW ALL+AC + + E AAQ++F L+ + +YV++SN+
Sbjct: 417 LDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNV 476
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
Y +G++ + +++R + V+K PGCSWIEL + VH F DR +P IYA L L
Sbjct: 477 YGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLNSL 536
Query: 670 TANL 673
TA L
Sbjct: 537 TARL 540
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 181/459 (39%), Gaps = 111/459 (24%)
Query: 17 LIVSTNKAITECG-RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
L V A+ C + G + A+ F+++PIR VV WN M+ GY++ +F+ L M
Sbjct: 89 LDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRM 148
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ +V + T + ILSV A + L +G+ IH +K GY+ V + L+ Y C I
Sbjct: 149 NDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCI 208
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
E+A +F+ + E KD+ W + S + +
Sbjct: 209 EDALEIFEMMRE-------------------------------KDIFSWNSIXSVHEQCG 237
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD-ES 254
D + L+L M +G P+ T +V+ AC+ L A G+ +HG +I G D +
Sbjct: 238 DH-DGTLRLLDRMLGAGIQ-PDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKD 295
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
I L++ N++I+ G + DA L+F R+ +
Sbjct: 296 IDDVLLK--------------------------NAVIDMYAKCGSMRDAHLVFERMXNKD 329
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
S+N MI GY ++G +++ +F +M E++ P
Sbjct: 330 VASWNIMIMGYGMHGYGNEALEMFSRM---------------CEVQLKP----------- 363
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL-VKTPFESNV 433
TF + ACS G + QG+ A + K +
Sbjct: 364 ----------------------DEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTI 401
Query: 434 YVGTSLVDMYSRCGSINDA-QASFSSISSPNVAAWTALM 471
T ++DM R G +++A + + + N W AL+
Sbjct: 402 EHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL 440
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 147/337 (43%), Gaps = 64/337 (18%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M ++ + +N I G+ + A +F+ M + + SWN++ + + D +L L
Sbjct: 186 MGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRL 245
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ M + ++ + T +T+L C+ L +L+ G++IH ++ SG
Sbjct: 246 LDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLG--------------- 290
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
++ K + D+ LL + ++ Y +C M DA VF +M KDV W +I GY
Sbjct: 291 ----KDGKDI------DDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGY 340
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
G E AL++F M E + P+E TF V+ AC+ G +G+ L + ++
Sbjct: 341 GMHGYGNE-ALEMFSRMCEV-QLKPDEVTFVGVLSACSHAGFVSQGR---NFLAQMKSKY 395
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRL 310
D + P + +I+ L G++++A EL
Sbjct: 396 DVA---------------------------PTIEHYTCVIDMLGRAGQLDEAYELALTMP 428
Query: 311 TEANSISYNSMIKG-----YAVYGQVDDSKRLFEKMP 342
EAN + + +++ +AV +V ++R+FE P
Sbjct: 429 IEANPVVWRALLAACRLHKHAVLAEV-AAQRVFELEP 464
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 442 MYSRCGSINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
MYS+C +N A + FS + NV A+ A+++G+ +G E ++ M + ++P+
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
TF + AC+ V E KI + +G+ + + +V+ + G + A+ +++
Sbjct: 61 TFPCAIKACLD---VLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 117
Query: 561 PIELDAVVWGALLSA 575
PI D V+W A+++
Sbjct: 118 PIR-DVVLWNAMVNG 131
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 277/529 (52%), Gaps = 59/529 (11%)
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
+ NL+ A VF ++ ++ ++ I G++ S D +K+ + + +G +P+ T
Sbjct: 58 INKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDP-DKSFHFYVQSKRNGL-VPDNLT 115
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
+ +++AC + G+ G HG +I+ GF+ D VY
Sbjct: 116 YPFLVKACTQKGSLDMGIQAHGQIIRHGFDSD----------------------VY---- 149
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
NSL+ ++G I+ A +F R++ + +S+ SM+ GY G V +++LF+K
Sbjct: 150 -----VQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDK 204
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
MP E+N VTW+ MISGY +N+ +KA++LY ++ + +
Sbjct: 205 MP-----------------EKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETV 247
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ +C+ LG+L+ G+ H ++++ N+ +GT+LVDMY+RCGSI+ A F +
Sbjct: 248 MVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLP 307
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+ +WT L+ G++ HG +A+ F M + + P TF VLSAC GLV G++
Sbjct: 308 GRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLE 367
Query: 521 IFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
+F SMK Y + P LEHY C+VDLLGR+G L EAE+F+ +MP++ +A +WGALL AC
Sbjct: 368 LFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIH 427
Query: 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSW 639
N E+ ERA + + L + YV+LSNIYA KW +IR+ + V K PG +
Sbjct: 428 KNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTL 487
Query: 640 IELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL--------NSVVLFD 680
E++ +VH F++ D+ +P I E + + N LFD
Sbjct: 488 FEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFD 536
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 158/309 (51%), Gaps = 6/309 (1%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +F Q+ + +N+ + G+S D+S R+ + + T+ ++ C Q
Sbjct: 66 AAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQ 125
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
SL G Q H +++ G++ +V + L+ Y+ +I+ A VF + + + W+ M
Sbjct: 126 KGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSM 185
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ GY++ ++ A +F KMP+K++V W+ +ISGYAK+ +KA++L+ ++ G +
Sbjct: 186 VAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKN-SFFDKAIELYFLLQSEGVH-A 243
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
NE SVI +CA LGA G+ H +++ + +G AL++ Y C + D A+ V+
Sbjct: 244 NETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVF 303
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVD 332
D+L + +LI G G E A F+R+ +A I++ +++ + G V+
Sbjct: 304 DQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVE 363
Query: 333 DSKRLFEKM 341
LFE M
Sbjct: 364 RGLELFESM 372
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 117/238 (49%), Gaps = 44/238 (18%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS + ++G + +AR LFD+MP + +V+W+ M+ GY+K + FD+++ L +
Sbjct: 179 VVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQS 238
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V NET ++++ CA L +L G++ H +L++ +G+ L+ YA C I++
Sbjct: 239 EGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDK 298
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A VFD+L + L W+ ++ G+ + GYA
Sbjct: 299 AIWVFDQLPGRDALSWTTLIAGFA--------------------------MHGYA----- 327
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
EKAL+ F M ++G P E TF +V+ AC+ HG L++ G E ES+
Sbjct: 328 -EKALEYFSRMEKAGLT-PREITFTAVLSACS-----------HGGLVERGLELFESM 372
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 98/214 (45%), Gaps = 15/214 (7%)
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
+ +RKL + + +F +C+ L L+ ++HAHL++ +V+ + L+ +
Sbjct: 7 LVLRKLELKNPKLSF---LESCTTLSHLK---IIHAHLIRAHTIFDVFAASCLISISINK 60
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
++ A F I +PN+ + + + G+S ++ + +VP+ T+ ++
Sbjct: 61 NLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLV 120
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
AC + G ++ G++ + +G + +V + G + A + + LD
Sbjct: 121 KACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISC-LDV 179
Query: 567 VVWGALLSACWFWMNMEVGE-RAAQKMFGLDKKP 599
V W ++++ ++ G+ +A+K+F DK P
Sbjct: 180 VSWTSMVAGY-----IKSGDVTSARKLF--DKMP 206
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 220/710 (30%), Positives = 341/710 (48%), Gaps = 101/710 (14%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
V N +T R G + +ARN+FD M +R +VSW M ++ SL L+ M
Sbjct: 85 VVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEMLE 144
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL--------KSGYECFEF-VGSGLLFF 128
S + N T C +++CLV K G + VGS L+
Sbjct: 145 SGLLPNAYTLCAAAHACFP-------HELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDM 197
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
A ++ A++VFD L E K VVVWT LI
Sbjct: 198 LARNGDLASARKVFDGLIE-------------------------------KTVVVWTLLI 226
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
S Y + + E+A++LF E G P+ YT S+I AC LG+ G +H L ++ G
Sbjct: 227 SRYVQG-ECAEEAVELFLDFLEDGFE-PDRYTMSSMISACTELGSVRLGLQLHSLALRMG 284
Query: 249 FEFDESIGGALIEFYCGC---EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
D + L++ Y +A D A +V++R+ + + +LI+G + G E+ +
Sbjct: 285 LASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVM 344
Query: 306 -----IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
+ N + N I+Y+S++K A D +++ H +I N +
Sbjct: 345 ALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQV-----HAHVIKSNQASA------ 393
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTM------------RKLAIDR---------TRS 399
N+++S Y ++ E+A +++ + R +D + S
Sbjct: 394 --HTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVRMDVGISSS 451
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
TF+ L A + +G L +GQ LHA +K F S+ +V SLV MYSRCG + DA SF+ +
Sbjct: 452 TFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNEL 511
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
NV +WT++++G + HG A+ LF M+ + PN T++ VLSAC GLV EG
Sbjct: 512 KDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGK 571
Query: 520 KIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
+ FRSM + +G++P +EHY C+VDLL RSG + EA EFI +MP++ DA+VW LL AC
Sbjct: 572 EYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRS 631
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
N+EVGE A+ + L+ + + YV+LSN+YA G W + IR + + K+ G S
Sbjct: 632 HDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLS 691
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL--------NSVVLFD 680
W+E+ + H F D ++P IY L+ L + S+VL D
Sbjct: 692 WMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHD 741
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 131/310 (42%), Gaps = 31/310 (10%)
Query: 293 GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
G + +GR L+ L + +++ NS++ Y+ G V ++ +F+ M R +
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGM--RGL------ 113
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC---- 408
R+ V+W +M S +N +L L M + + T HAC
Sbjct: 114 --------RDIVSWTAMASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHE 165
Query: 409 -SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CL L+H + + ++V VG++L+DM +R G + A+ F + V W
Sbjct: 166 LYCLVGGVVLGLVHKMGL---WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVW 222
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
T L++ Y EAV LF LE P+ T ++SAC G V G+++
Sbjct: 223 TLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALR 282
Query: 528 YGVVPTLEHYTCVVDLLGRSG---HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
G+ +VD+ +S + A + + MP + D + W AL+S ++ V
Sbjct: 283 MGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMP-KNDVISWTALISG---YVQSGV 338
Query: 585 GERAAQKMFG 594
E +FG
Sbjct: 339 QENKVMALFG 348
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/652 (28%), Positives = 323/652 (49%), Gaps = 75/652 (11%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I+ G G++ AR +FD+MP R VS+ +M+ Y K ++ L + R
Sbjct: 54 SNVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLK----NKDLPQAEILFREIP 109
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ N S ++S + L +Q+ +++ F + L+ Y ++EA R
Sbjct: 110 ERNVVADSAMISGYVRAGRLDKARQVFDQMVERNV----FSWTSLVSGYFKIGNVDEAMR 165
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+F+++ E N + W+ +VGY Q + +A D+F +MP+K+++ WT ++ Y ++ D ++
Sbjct: 166 LFNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVEN-DEIDE 224
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
A +LF M + N Y+++ +I C E
Sbjct: 225 AFELFYQMPQR-----NLYSWNIMISGCINANRLNE------------------------ 255
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNS 320
A+++++ + + +L+ GL G +E A F+ + + ++N+
Sbjct: 256 -----------AIQLFNSMPQRNEVSWTTLVTGLARNGMMELARKYFDHMPTKDIAAWNA 304
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
MI Y G + ++ LF MP ++I+S WN++I GY +N
Sbjct: 305 MITAYVDQGSMAEASNLFNLMPEKNIVS-----------------WNALIDGYARNGPES 347
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+L+ + M + +T + + AC + L Q L HL FE + + LV
Sbjct: 348 NSLRYLILMLRSNFKPNETTITSVLTACDSILELMQAHGLVIHL---GFEQDKVLANGLV 404
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
YSRCG + A+ F + ++ +WTA++ YS+HG G A+ +F ML P+
Sbjct: 405 TTYSRCGDVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGI 464
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
TFVG+LSAC AGLV +G +F SM +YGV P EHY+C+VD+LGR+G +++A + + +
Sbjct: 465 TFVGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSE 524
Query: 560 MPI-ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS--AYVILSNIYAVLGKW 616
MP E D V GALL AC ++ + +K+ ++K+P S +YV+L+N YA GKW
Sbjct: 525 MPPHECDGAVLGALLGACRLHKDVGLANHIGEKL--IEKEPTSSGSYVLLANAYAACGKW 582
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+ ++RK + VKK+PG S IE+ + H F V DR++P IY L+
Sbjct: 583 NEFAEVRKEMKERNVKKEPGFSQIEVKGKSHVFFVRDRSHPQLEEIYLFLDE 634
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 159/385 (41%), Gaps = 63/385 (16%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +V+ + I+ R G+L AR +FDQM R V SW +++ GY K DE++ L +
Sbjct: 110 ERNVVADSAMISGYVRAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQ 169
Query: 75 MHRSNVK---------------------LNETTFSTILSVCAQLNSLIDGKQIH------ 107
M NV N+ I++ A + S ++ +I
Sbjct: 170 MPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELF 229
Query: 108 -----------------CLVLKSGYECFEFVGS----------GLLFFYANCFEIEEAKR 140
C+ E + S L+ A +E A++
Sbjct: 230 YQMPQRNLYSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWTTLVTGLARNGMMELARK 289
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
FD + + W+ M+ YV M++A ++F MP+K++V W LI GYA++
Sbjct: 290 YFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNS 349
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
L +R + + PNE T SV+ AC + E HGL+I GFE D+ + L+
Sbjct: 350 LRYLILMLRSNFK--PNETTITSVLTAC---DSILELMQAHGLVIHLGFEQDKVLANGLV 404
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSI 316
Y C A ++D+LE + + ++I + G A +F R+ + + I
Sbjct: 405 TTYSRCGDVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGI 464
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKM 341
++ ++ + G V + LF+ M
Sbjct: 465 TFVGLLSACSHAGLVKKGQMLFDSM 489
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 26/266 (9%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I + N IT G + A NLF+ MP + +VSWN ++ GY++ SL + M R
Sbjct: 299 IAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLILMLR 358
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
SN K NETT +++L+ C +S+++ Q H LV+ G+E + + +GL+ Y+ C ++
Sbjct: 359 SNFKPNETTITSVLTAC---DSILELMQAHGLVIHLGFEQDKVLANGLVTTYSRCGDVLS 415
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGYAK 193
A+ +FD+L + + W+ M++ Y A VF +M K D + + L+S +
Sbjct: 416 ARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITFVGLLSACSH 475
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAF--------------CEGKV 239
+ +K LF M + P + ++ R G C+G V
Sbjct: 476 A-GLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEMPPHECDGAV 534
Query: 240 VHGLLIKCGFEFD----ESIGGALIE 261
+ LL C D IG LIE
Sbjct: 535 LGALLGACRLHKDVGLANHIGEKLIE 560
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 199/624 (31%), Positives = 300/624 (48%), Gaps = 84/624 (13%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMH--RSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
V WNTM+ + L+ M R+ ++ N TF +L + +G+++
Sbjct: 54 VFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEV 113
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H V+++G+ C EFV LL FY V C L+
Sbjct: 114 HASVVRTGFACSEFVSGALLGFY-------------------------------VACGLV 142
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
VF +M + +V+WT +I Y V EKAL+LFR MRE G P+ +V+
Sbjct: 143 GKGRQVFDEMRQPGLVLWTLIIRAYV-CVTFPEKALELFRTMREVGLT-PDMVAVSTVVS 200
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
AC LG K +H + K G E D + LI Y C + D A R + E P
Sbjct: 201 ACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQ--ETPM--- 255
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
N + +N+MI + ++ K+LF+ MP R +
Sbjct: 256 --------------------------KNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDV 289
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
+S WNSMI G+ + +++AL + M + T
Sbjct: 290 VS-----------------WNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLS 332
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
AC+ G+L G +HA++ K + + +SL+DMYS+CG I+ A F + ++
Sbjct: 333 ACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFT 392
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM- 525
WT+++ G + HG G +A+ F M E + P+ T VGVLSAC AGL+++G F+SM
Sbjct: 393 WTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSME 452
Query: 526 KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
K +G+VP +EHY +VDLLGR G L EA + I MP+E + ++WGA LSAC N+E+G
Sbjct: 453 KVFGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELG 512
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
E AA+++ GL + A V+LSN+YA KW + M +RK + +KK PGCS IE+N
Sbjct: 513 EVAARRLLGLXPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGS 572
Query: 646 VHAFSVEDRNNPNCNVIYATLEHL 669
VH F V D ++P I + +E +
Sbjct: 573 VHGFLVGDNSHPCYTEINSMVEKI 596
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 150/318 (47%), Gaps = 9/318 (2%)
Query: 28 CGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTF 87
CG G+ R +FD+M +V W ++ Y +++L L TM + +
Sbjct: 139 CGLVGK---GRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAV 195
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
ST++S C L L K +HC + KSG E FV S L+ Y C ++ A R F E
Sbjct: 196 STVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPM 255
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
N ++W+ M+ V+ N + +F MP +DVV W +I G+A+ + ++AL F
Sbjct: 256 KNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFAR-IGQYQEALTWFHE 314
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M SG + PN T S + ACA GA G +H + K D S+ +LI+ Y C
Sbjct: 315 MEFSGVS-PNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCG 373
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIK 323
D A+++++ L S++ GL GR E A F+++ EA + ++ ++
Sbjct: 374 DIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLS 433
Query: 324 GYAVYGQVDDSKRLFEKM 341
A G +D F+ M
Sbjct: 434 ACAHAGLLDQGWWYFQSM 451
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV N I + + L + LF MP R VVSWN+M+ G+++ ++ E+L+ M
Sbjct: 258 IVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEF 317
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S V N T + LS CA +L G IH V K+ + S L+ Y+ C +I++
Sbjct: 318 SGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDK 377
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A ++F+E ++D+ WT ++ G A G
Sbjct: 378 AVQIFEE-------------------------------STRRDLFTWTSIVCGLAMHGRG 406
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
EKAL F M+E+ + P++ T V+ ACA G +G
Sbjct: 407 -EKALHYFSKMKEA-QVQPDDVTMVGVLSACAHAGLLDQG 444
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 3/237 (1%)
Query: 362 NPVTWNSMISGYVQNNL--HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
N WN+MI V+N L + L YM + + TF L A +++G+
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+HA +V+T F + +V +L+ Y CG + + F + P + WT ++ Y
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
+A+ LF M E + P+ V+SAC G + + ++ G+ +
Sbjct: 173 PEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSST 232
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
++ G G L A F ++ P++ + VVW ++ N+E+G++ Q M D
Sbjct: 233 LISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGKQLFQSMPDRD 288
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 178/507 (35%), Positives = 279/507 (55%), Gaps = 25/507 (4%)
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
M A +F +MPK+DV +W LI GYA + CE+AL L+ M +G P+ YTF V+
Sbjct: 78 MDYARKMFDQMPKRDVFLWNTLIRGYADA-GPCEEALALYSNMHGAGL-FPDNYTFPFVV 135
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
R+CA L A EGK VH ++K GF+ D + +L+ Y G V+ + +
Sbjct: 136 RSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIV 195
Query: 286 ASNSLINGLISMGRIEDAELIFNRL----TEANSISYNS---------------MIKGYA 326
+ ++I G + ++ +F + T+ N+++ S +I GY
Sbjct: 196 SWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYG 255
Query: 327 VYGQVDDSKRLFEKMP--HRSIISLNTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKAL 383
+ VD L + + ++ T S+ M +N V+WN+MI+ Y QNN A+
Sbjct: 256 IKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAV 315
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+L+ M+ +D T + AC+ LG+L G+ +H + + E NV + +L+DMY
Sbjct: 316 KLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMY 375
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++CG+I+ A+ F + +V +WT+++ + HG G +A+ LF M ++ + PN+ TF
Sbjct: 376 AKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFA 435
Query: 504 GVLSACVRAGLVNEGMKIFRS-MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
V +AC +GLV EG K F S M+ Y ++P +EH C+VDLLGR+G L EA EFI MP+
Sbjct: 436 AVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPV 495
Query: 563 ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
E D VWGALL +C N+E+ E A+K+F LD + ++ YV++SNIYA G+W +
Sbjct: 496 EPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARL 555
Query: 623 RKRLTHLEVKKDPGCSWIELNSRVHAF 649
RK + E+KK PG S +E+N R H F
Sbjct: 556 RKLMEERELKKIPGHSLVEVNRRFHTF 582
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 147/537 (27%), Positives = 238/537 (44%), Gaps = 99/537 (18%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+ L++ST IT C + AR +FDQMP R V WNT++ GY+ +E+L+L S
Sbjct: 59 QNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSN 118
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
MH + + + TF ++ CA L++L +GK++HC ++K G++ FV S L+ Y+ E
Sbjct: 119 MHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGE 178
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+ VF E+ N + W+ ++ GYVQ + Y K
Sbjct: 179 TLGMELVFGEMVVRNIVSWTAVIAGYVQ--------------------------NRYFK- 211
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ L +FR M SG PN T SV+ ACA L GK++HG IK G + D S
Sbjct: 212 -----EGLGVFREMVGSG-TQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVS 265
Query: 255 IGGALIEFYCGC-------EAFDG------------------------AMRVYDRLENPC 283
+ ALI Y C FDG A++++ R++
Sbjct: 266 LTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEK 325
Query: 284 LNASN----SLINGLISMGRIEDA----ELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
++ S+I+ S+G + EL+ + E N N++I YA G +D ++
Sbjct: 326 VDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAR 385
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
+FE++P RS++S W SMI + E AL+L+ M+ +
Sbjct: 386 EVFERLPCRSVVS-----------------WTSMIGACASHGHGEDALKLFSRMKDEGVK 428
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS----LVDMYSRCGSIND 451
TF+ +F AC G +++G+ H + ++ G +VD+ R GS+ +
Sbjct: 429 PNSFTFAAVFTACRHSGLVEEGR---KHFESMMRDYSIMPGVEHCACMVDLLGRAGSLME 485
Query: 452 AQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
A + P+V+ W AL+ H A L+ E + D P TF ++S
Sbjct: 486 AYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLD--PQTVTFYVLMS 540
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 144/307 (46%), Gaps = 23/307 (7%)
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
FD + R N LN +SL + + RI A ++ N + +S +I +
Sbjct: 21 FDFRTNYHSRSFNYLLNCCSSLPD----LSRIH-ALVVTNGCGQNLLLSTKLIITACCLA 75
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
+D ++++F++MP R + WN++I GY E+AL LY
Sbjct: 76 PTMDYARKMFDQMPKRDVF-----------------LWNTLIRGYADAGPCEEALALYSN 118
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M + TF + +C+ L +L++G+ +H ++VK F+S+V+V +SLV MYS+ G
Sbjct: 119 MHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGE 178
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+ F + N+ +WTA++ GY + E + +F M+ PNA T V VL A
Sbjct: 179 TLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPA 238
Query: 509 CVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
C +N G I GV P + ++ L G+ G++ A M ++ + V
Sbjct: 239 CAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQ-NLVS 297
Query: 569 WGALLSA 575
W A+++A
Sbjct: 298 WNAMIAA 304
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 176/381 (46%), Gaps = 29/381 (7%)
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA--FDGAMRVYD 277
+F+ ++ C+ L +H L++ G + + LI C C A D A +++D
Sbjct: 31 SFNYLLNCCSSLPDLSR---IHALVVTNGCGQNLLLSTKLIITAC-CLAPTMDYARKMFD 86
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDD 333
++ + N+LI G G E+A +++ + A ++ ++ +++ AV + +
Sbjct: 87 QMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALRE 146
Query: 334 SKRLF----------EKMPHRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQ 375
K + + S++++ + ME RN V+W ++I+GYVQ
Sbjct: 147 GKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQ 206
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N ++ L ++ M T + AC+ L L G+L+H + +K + +V +
Sbjct: 207 NRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSL 266
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
+L+ +Y +CG++ A++ F + N+ +W A++ Y + G+ AV LF M + +
Sbjct: 267 TNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKV 326
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
+ T V V+SAC G +N G + +K G+ + ++D+ + G++ A E
Sbjct: 327 DFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLARE 386
Query: 556 FIKDMPIELDAVVWGALLSAC 576
+ +P V W +++ AC
Sbjct: 387 VFERLPCR-SVVSWTSMIGAC 406
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 154/348 (44%), Gaps = 56/348 (16%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
TN I G+ G + TAR+LFD M ++ +VSWN M+ Y + ++ L M V
Sbjct: 267 TNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKV 326
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ T +++S CA L +L G+ +H LV + G E + + L+ YA C I+ A+
Sbjct: 327 DFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLARE 386
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF+ ++P + VV WT +I A G E
Sbjct: 387 VFE-------------------------------RLPCRSVVSWTSMIGACASHGHG-ED 414
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
ALKLF M++ G PN +TF +V AC G EG+ +++ D SI +
Sbjct: 415 ALKLFSRMKDEGVK-PNSFTFAAVFTACRHSGLVEEGRKHFESMMR-----DYSIMPGVE 468
Query: 261 EFYCGCEAFDGA---MRVYDRLENPCLNASNSLINGLISMGRI----EDAELIFNR--LT 311
C + A M Y+ ++ + S+ L+ RI E AEL+ + L
Sbjct: 469 HCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLL 528
Query: 312 EANSISYNSMIKG-YAVYGQVDDSKRL--------FEKMPHRSIISLN 350
+ ++++ ++ YA G+ +D+ RL +K+P S++ +N
Sbjct: 529 DPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVN 576
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 197/651 (30%), Positives = 333/651 (51%), Gaps = 59/651 (9%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTML--CGYSKWAKFDESLSLV--STMHRSNVKLNETTFS 88
L A +LFD+MP T + ++T L C + + D + V M R+ V+ + TF
Sbjct: 52 HLRYALHLFDRMPASTFL-FDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFH 110
Query: 89 TIL--SVCAQLNSLIDGKQIHCLVLKSGYE-CFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+ S ++ +L+ +H L++ FV + L+ Y + +R FDE+
Sbjct: 111 FLFKCSSSSRPRALL-CTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEI 169
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ + W++++ G + ++SDA + + P +DV+ WT LI+ Y+++ D ++A+ F
Sbjct: 170 PVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRA-DRAKEAVDCF 228
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
+ M G P++ T V+ AC++L G +H L+ + G E++ ALI+ Y
Sbjct: 229 KNMLSEG-IAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAK 287
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
C F A V+D ++GR + S+N++I GY
Sbjct: 288 CGDFGHAREVFD------------------AVGRGRRPQ------------SWNAIIDGY 317
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
+G VD ++ LF++M R II T+NSMI+GY+ + +AL L
Sbjct: 318 CKHGHVDVARSLFDQMEVRDII-----------------TFNSMITGYIHSGQLREALLL 360
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+M MR+ + T L AC+ LG+L QG+ LHA + E+++Y+GT+L+DMY +
Sbjct: 361 FMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMK 420
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CG +N+A F + +V AWTA++ G + +G+G + F M PN +++ V
Sbjct: 421 CGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAV 480
Query: 506 LSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
L+AC + L+NEG F M+ Y + P +EHY C++DLLGRSG L EA + +K MP++
Sbjct: 481 LTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQP 540
Query: 565 DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRK 624
++V+W ++LSAC +++ + AA+ + ++ + YV L NI KW IR
Sbjct: 541 NSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRM 600
Query: 625 RLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
+ +VKK G S + + +VH F V D+++P I A LE ++ L S
Sbjct: 601 LMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKS 651
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 155/633 (24%), Positives = 283/633 (44%), Gaps = 72/633 (11%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
M +R V S N M+ G+ + D + ++ M S ++ TFSTIL VC+ +L
Sbjct: 757 MAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEAL--- 813
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
Q+H VL G C FVGS L+ Y + + +F EL N + +++L G
Sbjct: 814 -QLHGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGNL 872
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
L + F+ M ++ L+L N ++
Sbjct: 873 KLTEELICCFLDMRRQ---------------------YLEL------------NGLSYCY 899
Query: 224 VIRACARLGAFCE-GKVVHGLLIKCGF-EFDESIGGALIEFYCGC-EAFDGAMRVYDRLE 280
++ C + G + E G+ +HG+++K G+ + + +L++ Y ++ D + D L
Sbjct: 900 AMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILS 959
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNR-LTEANSISYNSMIKGYAVYGQVDDSKR--L 337
++ NS+++ G +++A + L S S + A+ G+ D +
Sbjct: 960 EDVISW-NSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQ 1018
Query: 338 FEKMPHR------SIISLNTMISV----------------IPEMERNPVTWNSMISGYVQ 375
+ H+ S+ T+I + IP + NS+I+ ++
Sbjct: 1019 IHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALE--CCNSLITSSLR 1076
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS--LQQGQLLHAHLVKTPFESNV 433
N+ + AL++ M + TFS A S S L Q+LH+ LVK FE ++
Sbjct: 1077 CNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDM 1136
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
V +SL+ Y+ G ++ + F + PNV +TA+++ + +G G+ A+ LF+ M+
Sbjct: 1137 AVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSS 1196
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ P+ TF+ ++ C +AG+ EG + M+ S + P H+ C+V+LL R G + E
Sbjct: 1197 GLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKE 1256
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A E ++ P+ W +LL +C +G+RAA + + +K + + +SN +
Sbjct: 1257 AMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNFFND 1316
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
+G + I++ EVKK G S IE++ R
Sbjct: 1317 IGDRETALRIKEMTNVKEVKKS-GHSLIEVSHR 1348
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 195/423 (46%), Gaps = 23/423 (5%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS I+ + G L AR L Q P+R V+SW +++ YS+ + E++ M
Sbjct: 175 VSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSE 234
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ ++ T +LS C+QL L G +H LV + G E + L+ YA C + A
Sbjct: 235 GIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHA 294
Query: 139 KRVFDELHEDNELL-WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+ VFD + W+ ++ GY + + A +F +M +D++ + +I+GY S
Sbjct: 295 REVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHS-GQ 353
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+AL LF MR + N +T S++ ACA LGA +G+ +H + E D IG
Sbjct: 354 LREALLLFMNMRRHDLRVDN-FTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGT 412
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EA 313
AL++ Y C + A V+ R+ ++A ++I GL G + F ++ +
Sbjct: 413 ALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQP 472
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
N +SY +++ + +++ + F++M + ++ P++E + MI
Sbjct: 473 NPVSYIAVLTACSHSCLLNEGRLYFDEM--------RILYNIHPQIEH----YGCMIDLL 520
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESN 432
++ L ++A+ L TM + ++ + AC + Q HL+K P E
Sbjct: 521 GRSGLLDEAMDLVKTM---PMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDA 577
Query: 433 VYV 435
VYV
Sbjct: 578 VYV 580
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 153/361 (42%), Gaps = 33/361 (9%)
Query: 174 IKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
+ M +DV ++I+G+ + DG ++A ++RWM SG +TF +++ C+
Sbjct: 755 VTMAVRDVASLNRMITGFIR--DGLADRARAVYRWMVASGIR-ETPHTFSTILGVCSTY- 810
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
E +HG ++ G + +G AL+ Y E+ ++ ++ L N ++
Sbjct: 811 ---EALQLHGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLR 867
Query: 293 GLISMGRIEDAELIF----NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK-------M 341
GL ++ E+ F + E N +SY +KG G+ + R +
Sbjct: 868 GLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWI 927
Query: 342 PHRSII-------------SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
P + S++T+ ++ + + ++WNS++S Y ++A+
Sbjct: 928 PSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQ 987
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE-SNVYVGTSLVDMYSRCG 447
M + +F L G Q G +H + K F S+V+V T+L+DMY +C
Sbjct: 988 MLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCC 1047
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
+ + A F+ I S + +L+ + A+ + M+ + + P+ TF +
Sbjct: 1048 CFDHSLAIFNEIPSIALECCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSATMK 1107
Query: 508 A 508
A
Sbjct: 1108 A 1108
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA--QL 97
+F+++P + N+++ + FD +L ++ M V ++ TFS + +
Sbjct: 1055 IFNEIPSIALECCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSAS 1114
Query: 98 NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
SL + +H ++K G+E V S L+ YA ++ + +F+ L + N
Sbjct: 1115 PSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPN-------- 1166
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPN 217
V+ +T +IS A+ DG +A++LF M SG P+
Sbjct: 1167 -----------------------VICFTAIISACARYGDG-ARAMELFDQMVSSGLK-PD 1201
Query: 218 EYTFDSVIRACARLGAFCEGKVV 240
TF I C + G F EG++V
Sbjct: 1202 NVTFLCAIAGCDQAGMFEEGRLV 1224
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 182/583 (31%), Positives = 308/583 (52%), Gaps = 85/583 (14%)
Query: 68 SLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLF 127
SLS +ST + N+ S + C + L +Q H ++KSG F S +L
Sbjct: 10 SLSPIST--SKLIISNQPYLSMVDKYCTTMRDL---QQFHAHLIKSGQAIESFAASRILA 64
Query: 128 FYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKL 187
F A+ M A+ VF++M ++ W +
Sbjct: 65 FCASPL------------------------------GNMDYAYLVFLQMQNPNLFSWNTV 94
Query: 188 ISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
I G+++S + + AL LF M S + P T+ S+ +A ++LG +G +HG +IK
Sbjct: 95 IRGFSQSSNP-QIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAHDGAQLHGRIIKL 153
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
G +FD I ++ Y + G + +A IF
Sbjct: 154 GLQFDPFIRNTILYMYA-------------------------------TGGFLSEARRIF 182
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
N+ E + +S+NSMI G A G++D+S++LF+KMP +NP++WN
Sbjct: 183 NQEMEFDVVSWNSMILGLAKCGEIDESRKLFDKMP-----------------VKNPISWN 225
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
SMI GYV+N + ++AL+L++ M++ I + T L +A + +G+L+QG +H ++ K
Sbjct: 226 SMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKN 285
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ N V T+++DMY +CGSI +A F I ++++W +++ G + +G EA+L+F
Sbjct: 286 NLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKEAILVF 345
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGR 546
+++ + P+ +F+ VL+AC +V+EGM+ F MK +Y + P+++HY +VD++ R
Sbjct: 346 KMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFSRMKNTYRIEPSIKHYNLMVDMISR 405
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G L EAE+FIK MPIE DA++WG LLSAC + N E+ +RAA+K+ LD + YV++
Sbjct: 406 AGFLEEAEQFIKTMPIEKDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEETMGYVLM 465
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+NI+A + M+ R + +V+K+PG S+IE++ VH F
Sbjct: 466 ANIHAWGNNFVGAMEKRVAMRMKKVEKEPGGSFIEVDEEVHEF 508
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 197/392 (50%), Gaps = 22/392 (5%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL-VSTMHRSNVKLNETTFSTI 90
G + A +F QM + SWNT++ G+S+ + +L L + + S V+ T+ +I
Sbjct: 71 GNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSI 130
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
+QL DG Q+H ++K G + F+ + +L+ YA + EA+R+F++ E +
Sbjct: 131 FKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDV 190
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W+ M++G +C + ++ +F KMP K+ + W +I GY ++ ++ALKLF M+E
Sbjct: 191 VSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRN-GMFKEALKLFIKMQE 249
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
P+E+T S++ A A++GA +G +H + K + + + A+I+ YC C +
Sbjct: 250 E-RIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIG 308
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYA 326
A++V++++ L++ NS+I GL G ++A L+F L + + IS+ +++
Sbjct: 309 NALQVFEKIPCRSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACN 368
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
VD+ F +M + I P ++ +N M+ + E+A Q
Sbjct: 369 HGAMVDEGMEFFSRMKNTYRIE--------PSIKH----YNLMVDMISRAGFLEEAEQFI 416
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
TM I++ + L AC G+ + +
Sbjct: 417 KTM---PIEKDAIIWGCLLSACRIYGNTEMAK 445
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 147/341 (43%), Gaps = 66/341 (19%)
Query: 4 YATQSQTLMTQETL--IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+ ++++ + QE +VS N I + G++ +R LFD+MP++ +SWN+M+ GY +
Sbjct: 174 FLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVR 233
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
F E+L L M ++ +E T ++L+ AQ+ +L G IH + K+ + V
Sbjct: 234 NGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIV 293
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+ ++ Y C I +A VF K+P + +
Sbjct: 294 VTAIIDMYCKCGSI-------------------------------GNALQVFEKIPCRSL 322
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
W +I G A V+GCEK L M ES P+ +F +V+ AC H
Sbjct: 323 SSWNSMIFGLA--VNGCEKEAILVFKMLESSSLKPDCISFMAVLTACN-----------H 369
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
G ++ G EF F Y R+E P + N +++ + G +E
Sbjct: 370 GAMVDEGMEF-----------------FSRMKNTY-RIE-PSIKHYNLMVDMISRAGFLE 410
Query: 302 DAELIFNRLT-EANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+AE + E ++I + ++ +YG + +KR EK+
Sbjct: 411 EAEQFIKTMPIEKDAIIWGCLLSACRIYGNTEMAKRAAEKV 451
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 183/628 (29%), Positives = 313/628 (49%), Gaps = 50/628 (7%)
Query: 30 RNGQLVTARNLFDQMPIR---TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
R G + AR +F P + WN+++ E+L L M V + T
Sbjct: 82 RYGLVSDARKVFGSAPFECYSNFLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFT 141
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
F +L + L + K +HC V++ G++ VG+ L+ YA +++A++VFD++
Sbjct: 142 FPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMR 201
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV----VVWTKLISGYAKSVDGCEKAL 202
+ + W+ M+ GY ++ A +F +M + V V WT L+S +A+ E+ +
Sbjct: 202 IKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHAR-CGHLEETM 260
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
LF MR G P V+ CA L G+++HG ++K GF
Sbjct: 261 VLFCKMRMKGVG-PTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGF------------- 306
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI 322
N L A N+LI G + DAE +F+ + N +S+N++I
Sbjct: 307 ------------------NDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALI 348
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
+A G D + L ++ + PEM+ N +TW+++I G+ L E++
Sbjct: 349 SSFAESGVYDKALELLSQLEK---------MEAYPEMKPNVITWSAIICGFASKGLGEES 399
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L+++ M+ + T + + C+ L +L G+ +H H+++ + NV VG L++M
Sbjct: 400 LEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINM 459
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
Y++CGS F + + + +W +++ GY HGLG +A+ F M++ P+ TF
Sbjct: 460 YTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTF 519
Query: 503 VGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+ LSAC AGLV EG +F M+ ++ + P +EHY C+VDLLGR+G + EA IK MP
Sbjct: 520 IAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGMP 579
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
+E +A +W +LL++C + ++ E AA K+ L+ K ++++LSNI+A +W
Sbjct: 580 MEPNAYIWSSLLNSCRMHKDTDLAEEAAAKISNLNSKITGSHMLLSNIFAASCRWEDSAR 639
Query: 622 IRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+R +KK PG SWIE+ +V+ F
Sbjct: 640 VRISARAKGLKKVPGWSWIEVKKKVYMF 667
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 50/290 (17%)
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
++ Y+ YG V D++++F P E N + WNS+I V +
Sbjct: 76 LVSIYSRYGLVSDARKVFGSAPF--------------ECYSNFLLWNSIIRANVYHGYCI 121
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+ALQLY MR + TF +L A S LG+ + LH H+V+ F+++++VG L+
Sbjct: 122 EALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELI 181
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
MY++ ++DA+ F + +V +W +++GY+++ + A +F M + + PN
Sbjct: 182 GMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPV 241
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV-------------------- 540
T+ +LS+ R G + E M +F M+ GV PT E V
Sbjct: 242 TWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIHGYM 301
Query: 541 ---------------VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ L G+ G + +AE+ +M ++ + V W AL+S+
Sbjct: 302 VKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVK-NLVSWNALISS 350
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 17/217 (7%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
F L C+ +Q + +H+ V T + +V LV +YSR G ++DA+ F S
Sbjct: 41 FDHLLRQCN---GIQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAP 97
Query: 461 ---SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
N W +++ +HG EA+ L+ M ++ + TF +L A G N
Sbjct: 98 FECYSNFLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNM 157
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
+ + +G L ++ + + + +A + M I+ V W ++S
Sbjct: 158 CKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIK-SVVSWNTMVSG-- 214
Query: 578 FWMNMEVGERAAQKMF------GLDKKPISAYVILSN 608
+ N +V A +MF G++ P++ +LS+
Sbjct: 215 YAYNYDV--NGASRMFHQMELEGVEPNPVTWTSLLSS 249
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 182/562 (32%), Positives = 291/562 (51%), Gaps = 61/562 (10%)
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACAR 230
V + P W LI Y +V G + +L L+ M S P+ +TF V++AC+
Sbjct: 49 VLDQTPSPTDFSWNSLIRAY--TVHGSPQNSLFLYLKMLRSSTK-PSNFTFPFVLKACST 105
Query: 231 LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSL 290
LG+ EG+ +H +++ GF D + +LI+ YC C D A +D + + NS+
Sbjct: 106 LGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSI 165
Query: 291 INGLISMGRIEDAELIFNRLT-EANSISYNSMIKGYAVYGQVDDSKRLFEKM-------- 341
I+G + G++E A +F + N + + +MI GY G + LF +M
Sbjct: 166 ISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQ 225
Query: 342 PHRSI----------------------------ISLNT-MISVIPEME------------ 360
P+ + I LNT +++ + +M
Sbjct: 226 PNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRI 285
Query: 361 ------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+N +WN++I+G VQ L E+A+ LY M+ ++ T + AC+ LG+L
Sbjct: 286 FDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGAL 345
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ G+ +H +L + + NV + T+LVDMY++CG I+DA F S +VA W A++ G
Sbjct: 346 ELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGL 405
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPT 533
++HG G +++ +F M+ + PN TF+GVLSAC +GLV EG F SM +G+ P
Sbjct: 406 AYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPK 465
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
LEHY C+VDLLGR+GHL EA E +++M I D+++WGALLSAC N+E+ ++ ++ +
Sbjct: 466 LEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIM 525
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
I ++LSNIYA G+W +R+++ +KK GCSW+E++ VH F VED
Sbjct: 526 ASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVED 585
Query: 654 RNNPNCNVIYATLEHLTANLNS 675
+ IY E L +L +
Sbjct: 586 TTHLKSGEIYGAYEILVNHLKA 607
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 232/490 (47%), Gaps = 32/490 (6%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR + DQ P T SWN+++ Y+ SL L M RS+ K + TF +L C+
Sbjct: 46 ARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACST 105
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L S+++G+QIH VL+ G+ FV + L+ Y CF ++ A+ +D++ +E+ W+ +
Sbjct: 106 LGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSI 165
Query: 157 LVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
+ GYVQ + A D+F +MP +++VV WT +I+GY K D E L LFR M S + +
Sbjct: 166 ISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVE-MLSLFRQMLVSADEV 224
Query: 216 -PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
PN T ++ AC+ L + G+ + + + + ALI+ Y C + A R
Sbjct: 225 QPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWR 284
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQ 330
++D + L + N++I G + G +E+A ++ + + N I+ +++ A G
Sbjct: 285 IFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGA 344
Query: 331 VDDSKRLFEKMPHRSIISLNTMISV-------------------IPEMERNPVTWNSMIS 371
++ + + + R+ + LN +++ + E++ WN+MI
Sbjct: 345 LELGREVHLYLG-RNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMIL 403
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFE 430
G + +L ++ M + + TF + AC+ G +++G++ + + K
Sbjct: 404 GLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLS 463
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSS-ISSPNVAAWTALMNGYS-HHGLGSEAVLLFE 488
+ +VD+ R G + +A + + P+ W AL++ H L +
Sbjct: 464 PKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISET 523
Query: 489 IMLEQDIVPN 498
IM QD PN
Sbjct: 524 IMASQD--PN 531
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 143/326 (43%), Gaps = 67/326 (20%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPI-RTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
VS N I+ + GQ+ AR+LF++MP+ R VV W M+ GY K F E LSL M
Sbjct: 160 VSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLV 219
Query: 78 S--NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
S V+ N T +LS C+ L + G+ + + + + + L+ Y+ C ++
Sbjct: 220 SADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDV 279
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
E+A R+FD + N W+ ++ G VQ L+ +A D++ M + V
Sbjct: 280 EKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSV-------------- 325
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
PNE T +V+ ACA LGA G+ VH L + G + + +
Sbjct: 326 -------------------KPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVIL 366
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
AL++ Y C G+I+DA LIF + +E +
Sbjct: 367 ATALVDMYAKC-------------------------------GKIDDACLIFVKTSEKDV 395
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKM 341
+N+MI G A +G DS +F +M
Sbjct: 396 ALWNAMILGLAYHGDGRDSLAVFSQM 421
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 33/208 (15%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A +FD + + + SWN ++ G + +E++ L M +VK NE T +L
Sbjct: 277 GDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVL 336
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S CA L +L G+++H + ++G + + + L+ YA C +I++A +F + E +
Sbjct: 337 SACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVA 396
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
LW+ M++G D+ VF +M + V
Sbjct: 397 LWNAMILGLAYHGDGRDSLAVFSQMVRAGV------------------------------ 426
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKV 239
PN+ TF V+ AC G EG+V
Sbjct: 427 ---QPNDVTFIGVLSACNHSGLVEEGRV 451
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 13/215 (6%)
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
SL Q +HA + ++ L+D++S I+ A+ SP +W +L+
Sbjct: 11 SLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPTDFSWNSLIR 66
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
Y+ HG ++ L+ ML P+ TF VL AC G V EG +I + G
Sbjct: 67 AYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGS 126
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
L ++D+ + L A F DM D V W +++S W +E A+ +
Sbjct: 127 DLFVCNSLIDMYCKCFRLDSARNFWDDMGFR-DEVSWNSIISGYVQWGQVE----KARDL 181
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
F ++ P+ V+ A++ +GK+ D + L+
Sbjct: 182 F--EEMPMRRNVVCWT--AMINGYGKEGDFVEMLS 212
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/552 (32%), Positives = 290/552 (52%), Gaps = 24/552 (4%)
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+ ++ +DN + + ++ Y +C+ + A +F M K++VV W L++GY + E
Sbjct: 53 ITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLE- 111
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
L+LF+ M PNEY F ++I +C+ G EG HG +K G F + + ALI
Sbjct: 112 VLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALI 171
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG----------RIEDAELIFNRL 310
Y GAM V+ + + + N +INGL+ G R+ D ++++ +
Sbjct: 172 CMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNV 231
Query: 311 TEANSISYNSMIK----GYAVYGQVDDSKRLFEKMPHRSIIS--------LNTMISVIPE 358
T + S +K G V+ ++ + ++ +II LN
Sbjct: 232 TYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRL 291
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+N V+W ++++ Y QN E+AL + M + TF+VL ++C+ + +L G+
Sbjct: 292 QTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGK 351
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
LLH + K+ FE ++ VG +L++MYS+ GSI A F + + W+A++ G SHHG
Sbjct: 352 LLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHG 411
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVVPTLEHY 537
LG EA+++F+ ML P+ TFVGVLSAC G V EG MK G+ P +EHY
Sbjct: 412 LGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHY 471
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
TC+V LL ++G L EAE F+K P++ D V W LLSAC N +G++ A+ + +D
Sbjct: 472 TCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDP 531
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+ Y++LSN+YA +W + IRK + VKK+PG SWIE+ + +H F E + +P
Sbjct: 532 GDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHP 591
Query: 658 NCNVIYATLEHL 669
N IY ++ L
Sbjct: 592 ESNQIYEKVQEL 603
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 138/312 (44%), Gaps = 41/312 (13%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
YA +S + Q N I R + A +++ ++P V S+N ++ G +
Sbjct: 154 YALKSGLVFHQYV----KNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENG 209
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS 123
E+L ++ M + + T+ T +C+ L L G Q+HC + ++G E FV S
Sbjct: 210 YPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSS 269
Query: 124 GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
++ Y C I A++VF+ L N + W+ +L Y Q +A + F +M
Sbjct: 270 AIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEM------- 322
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
VDG +PNEYTF ++ +CA + A GK++H
Sbjct: 323 ----------EVDGL----------------LPNEYTFAVLLNSCAGISALGHGKLLHTR 356
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIE 301
+ K GFE +G ALI Y + + A +V+ LE C ++ +++I GL G
Sbjct: 357 IKKSGFEDHIIVGNALINMYSKSGSIEAAHKVF--LEMICRDSITWSAMICGLSHHGLGR 414
Query: 302 DAELIFNRLTEA 313
+A ++F + A
Sbjct: 415 EALVVFQEMLAA 426
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 33/209 (15%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G ++ AR +F+++ + VVSW +L YS+ F+E+L+ M + NE TF+
Sbjct: 276 GKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFA 335
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L+ CA +++L GK +H + KSG+E VG+ L+ Y+ IE A +VF E+
Sbjct: 336 VLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICR 395
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + WS M+ G L +A VF +M
Sbjct: 396 DSITWSAMICGLSHHGLGREALVVFQEML------------------------------- 424
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEG 237
+ + P+ TF V+ ACA LG+ EG
Sbjct: 425 --AAKECPHYVTFVGVLSACAHLGSVQEG 451
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 142/289 (49%), Gaps = 32/289 (11%)
Query: 295 ISMGRIEDAELIF-NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+ G++ A LI N+ T+ N + NS+I YA Q+ ++ LF+ M
Sbjct: 41 LKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM------------ 88
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST---FSVLFHACSC 410
+RN V+W ++++GY N L + L+L+ TM +++D R F+ + +CS
Sbjct: 89 -----RKRNVVSWGALMAGYFHNGLVLEVLRLFKTM--ISVDYMRPNEYIFATIISSCSD 141
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
G + +G H + +K+ + YV +L+ MYSR + A + + + +V ++ +
Sbjct: 142 SGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNII 201
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI----FRSMK 526
+NG +G SEA+ + + M+++ IV + T+V C + G+++ FR+
Sbjct: 202 INGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGA 261
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
Y + + ++D+ G+ G++ A + + + + V W A+L+A
Sbjct: 262 EYDSFVS----SAIIDMYGKCGNILNARKVFNRLQTK-NVVSWTAILAA 305
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 39/257 (15%)
Query: 413 SLQQGQLLHAHLVKT--PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
+L+ G+++HAHL+ T + N+ SL+++Y++C I A+ F + NV +W AL
Sbjct: 40 NLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGAL 99
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIV-PNAATFVGVLSACVRAGLVNEGMK--------- 520
M GY H+GL E + LF+ M+ D + PN F ++S+C +G V EG +
Sbjct: 100 MAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSG 159
Query: 521 -IFR-------------------SMKSYGVVPTLE--HYTCVVDLLGRSGHLHEAEEFIK 558
+F +M + VP L+ Y +++ L +G+ EA E +
Sbjct: 160 LVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLD 219
Query: 559 DMPIEL---DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
M E D V + C ++ +G + +MF + S + S I + GK
Sbjct: 220 RMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDS--FVSSAIIDMYGK 277
Query: 616 WGKKMDIRKRLTHLEVK 632
G ++ RK L+ K
Sbjct: 278 CGNILNARKVFNRLQTK 294
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 7/199 (3%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E I+ N I ++G + A +F +M R ++W+ M+CG S E+L +
Sbjct: 363 EDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQE 422
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDG-KQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M + + TF +LS CA L S+ +G ++ L+ ++G E + ++
Sbjct: 423 MLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAG 482
Query: 134 EIEEAKRVFDELHEDNELL-WSLMLVG-YVQCN--LMSDAFDVFIKMPKKDVVVWTKLIS 189
++EA+ +++ W +L +V N L ++ ++M DV + L +
Sbjct: 483 RLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSN 542
Query: 190 GYAKSV--DGCEKALKLFR 206
YAK+ DG K KL R
Sbjct: 543 MYAKAKRWDGVVKIRKLMR 561
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 182/612 (29%), Positives = 311/612 (50%), Gaps = 57/612 (9%)
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+ LS C + + G++ HC V+K G EFV + L+ YA C E++ A RV+D
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYD----- 172
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
KM D LIS YA++ +A ++F +
Sbjct: 173 --------------------------KMTSLDAATCNCLISAYARN-GFFVQAFQVFMQI 205
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
G PN YT+ +++ C + A EGK +H ++K + + ++G AL+ Y C
Sbjct: 206 GNMGTR-PNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGM 264
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYN----- 319
+ A V++ L + + + ING G + A F+ + E+ N +++
Sbjct: 265 MEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLAS 324
Query: 320 -----SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER---------NPVT 365
I G + QV +II + + + + E E+ + V+
Sbjct: 325 CGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVS 384
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WN++I+GYV N EKA++ + M K + T+S +F ACS SL +H+ L+
Sbjct: 385 WNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLI 444
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K+ ESN++V +SL++ Y++CGS+ +A F+ IS +V +W +++ YS +G +A+
Sbjct: 445 KSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIF 504
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
L M+E+ P + TF+ VLSAC +GLV EG + F+SM + Y + P H +C+VD+L
Sbjct: 505 LLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDIL 564
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L A +FIK + ++ A +W LL+AC + N+++ E A+K+ L+ + YV
Sbjct: 565 GRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYV 624
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
LSN+YA +G+W + R+ + E+ K+PGCSWIE+N++++ F D+ +P +Y
Sbjct: 625 TLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYE 684
Query: 665 TLEHLTANLNSV 676
L+ L + +
Sbjct: 685 KLKQLVRQIQDI 696
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 180/573 (31%), Positives = 298/573 (52%), Gaps = 52/573 (9%)
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+ HR+ + + T++ + + A+ +L G+ +H ++ G + + L+ FY C
Sbjct: 794 STHRT-FQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECG 852
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++ A+++FD K+P ++ W L A+
Sbjct: 853 QLSNARKLFD-------------------------------KIPNTNIRRWIVLTGACAR 881
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
E+AL F M++ G PN++ S+++AC L G+ +H +++K FE D
Sbjct: 882 R-GFYEEALSAFSEMQKEGLR-PNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDA 939
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
I ALI Y C + A RV+D + + L N++++G G + +A + ++ +A
Sbjct: 940 YIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQA 999
Query: 314 ----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
N +S+N++I G++ QV D + E + L T V P++ V+W S+
Sbjct: 1000 GVKPNVVSWNTLIAGFS---QVGDKSMVSE------VFRLMTANGVEPDV----VSWTSV 1046
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
ISG+VQN + + + M + T S L AC+ + +L+ G+ +H + +
Sbjct: 1047 ISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGV 1106
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
E +VYV ++LVDMY++CG I++A+ F + N W +L+ GY++HG +EA+ LF
Sbjct: 1107 EKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQ 1166
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSG 548
M E D + TF VL+AC AG+V G +F M+ Y + P LEHY C+VDLLGR+G
Sbjct: 1167 MEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAG 1226
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L EA + IK MP+E D VWGALL AC N+E+ E AA+ +F L+ + + ++LSN
Sbjct: 1227 KLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSN 1286
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
+YA G+WG ++K + + K PGCSWIE
Sbjct: 1287 LYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 231/504 (45%), Gaps = 66/504 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ +A ++D+M + N ++ Y++ F ++ + + + N T+ST+L
Sbjct: 162 GEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTML 221
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+VC ++++ +GKQ+H V+K Y VG+ LL Y+ C +EEA+ VF+ L + N
Sbjct: 222 AVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRN-- 279
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
++ WT I+G+ + D +KALK F MRES
Sbjct: 280 -----------------------------IISWTASINGFYQHGD-FKKALKQFSMMRES 309
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PNE+TF V+ +C + F +G++ H +IK G +G A+I+ Y G D
Sbjct: 310 GIE-PNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDE 368
Query: 272 AMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA 326
A + + ++ N S N+LI G + +IE A F R+ + N +Y+++ K +
Sbjct: 369 AEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACS 428
Query: 327 VYGQVDDSKRLFEKMPHRSII-----------------SLNTMISVIPEM-ERNPVTWNS 368
+ + + ++ ++ ++ SL + V ++ + + V+WNS
Sbjct: 429 SFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNS 488
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-- 426
+I Y QN KA+ L M + T TF + ACS G +Q+GQ +V+
Sbjct: 489 IIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDY 548
Query: 427 --TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEA 483
P E++ + +VD+ R G + +A ++ P + W L+ ++ A
Sbjct: 549 SIQPEETHC---SCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMA 605
Query: 484 VLLFEIMLEQDIVPNAATFVGVLS 507
+ E +L D+ PN AT LS
Sbjct: 606 EYVAEKIL--DLEPNDATVYVTLS 627
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 205/493 (41%), Gaps = 123/493 (24%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
TECG QL AR LFD++P + W + ++ ++E+LS S M + ++ N+
Sbjct: 849 TECG---QLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQF 905
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+IL C L+ G+ +H ++LK+ +E ++ S L++ Y+ C +E+A RVFD +
Sbjct: 906 VLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI 965
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEKA 201
+ + ++ + M+ GY Q + +A B+ KM K +VV W LI+G+++ D
Sbjct: 966 VDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDK-SMV 1024
Query: 202 LKLFRWMRESG----------------ENMPNEYTFD------------------SVIRA 227
++FR M +G +N N FD S++ A
Sbjct: 1025 SEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPA 1084
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
C + GK +HG + G E D + AL++ Y C
Sbjct: 1085 CTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKC--------------------- 1123
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
G I +A+++F + E N++++NS+I GYA +G +++ LF +M S
Sbjct: 1124 ----------GYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQM-EESDT 1172
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
L+ + TF+ + +A
Sbjct: 1173 KLDHL-----------------------------------------------TFTAVLNA 1185
Query: 408 CSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVA 465
CS G ++ G+ L + K E + +VD+ R G +++A ++ P+
Sbjct: 1186 CSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKF 1245
Query: 466 AWTALMNGYSHHG 478
W AL+ +HG
Sbjct: 1246 VWGALLGACRNHG 1258
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 192/438 (43%), Gaps = 56/438 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T + G + A +F+ + R ++SW + G+ + F ++L S M S ++
Sbjct: 253 NALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIE 312
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
NE TFS +L+ C + IDG+ H V+K G FVG+ ++ Y+ E++EA++
Sbjct: 313 PNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQ 372
Query: 142 FDEL-HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
F ++ + + W+ ++ GYV + A + F +M K+DV
Sbjct: 373 FKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVAC----------------- 415
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
NE+T+ ++ +AC+ + +H LIK E + + +LI
Sbjct: 416 ----------------NEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLI 459
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSI 316
E Y C + + A++V+ ++ + + + NS+I G A + ++ E S
Sbjct: 460 EAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSX 519
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
++ +++ + G V + + F+ M S+ PE + M+ +
Sbjct: 520 TFLTVLSACSHSGLVQEGQEFFKSMVQD--------YSIQPE----ETHCSCMVDILGRA 567
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYV 435
E AL ++KL + T S + L AC +LQ + + ++ P ++ VYV
Sbjct: 568 GQLENALDF---IKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYV 624
Query: 436 GTSLVDMYSRCGSINDAQ 453
+L +MY+ G DA+
Sbjct: 625 --TLSNMYAEVGRWADAE 640
>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 729
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 197/641 (30%), Positives = 316/641 (49%), Gaps = 70/641 (10%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
ARN+FDQM R VVSWN ++CGYS+ ++ L M R N K N+TT ++L C
Sbjct: 110 ARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGC 169
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ G+ IH +K+G+ + + L+ YA C ++E ++ +FDE+ E
Sbjct: 170 FELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDE--------- 220
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENM 215
K VV W +I Y + +G +KA+ F+ M + G +
Sbjct: 221 ----------------------KSVVSWNTMIGVYGQ--NGLFDKAILYFKEMLKEGFH- 255
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ T +++ A AF E VH ++KCGF D S+ +L+ Y + A ++
Sbjct: 256 PSSVTIMNLVSA----NAFPEN--VHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQL 309
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIF-------------------NRLTEANSI 316
Y L ++I+ G IE A F + +T +
Sbjct: 310 YKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHF 369
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMP--HRSIISLNTMISVIPEMERNP-VTWNSMISGY 373
+ GY V + + + + + + +S+ +M P +TWNSMISG
Sbjct: 370 AIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGC 429
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
VQ A++L+ M T + L C LG+L+ G+ LH+++++
Sbjct: 430 VQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVED 489
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
++GT+L+DMYS+CG ++ A+ F +I P +A W A+++GYS +GL A + + EQ
Sbjct: 490 FIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQ 549
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ P+ TF+GVL+AC GLV G++ F M K YG++P+L+HY C+V LLG+ G E
Sbjct: 550 GLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKE 609
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A EFI M I+ D+ VWGALL+AC +++GE A+K+F L+ K YV++SN+YA+
Sbjct: 610 AIEFINKMEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAI 669
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
+G+W +R E+ KD G S + S +D
Sbjct: 670 VGRWDDVARVR------EMMKDSGGDGCSGVSVIDVISADD 704
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/554 (21%), Positives = 220/554 (39%), Gaps = 102/554 (18%)
Query: 68 SLSLVSTMHRSNVKLNETTFSTILSV---------CAQLNSLIDGKQIHCLVLKSGYECF 118
+L + + ++NV NE TFS ++ C +L +QI LK G F
Sbjct: 32 ALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAAL-QARQIQTQCLKRGVNQF 90
Query: 119 EFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK 178
V + L+ Y A+ +FD++ + + W++++ GY Q + A +F+ M
Sbjct: 91 IHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDM-- 148
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+RE+ + PN+ T S++ +C +G+
Sbjct: 149 -----------------------------LRENFK--PNQTTIVSLLPSCGCFELIFQGR 177
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+HG IK GF D + AL+ Y C+ + + ++D ++ + + N++I G
Sbjct: 178 SIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNG 237
Query: 299 RIEDAELIFNR---------------LTEANSISYN------------------SMIKGY 325
+ A L F L AN+ N S++ Y
Sbjct: 238 LFDKAILYFKEMLKEGFHPSSVTIMNLVSANAFPENVHCYVVKCGFTNDASVVTSLVCLY 297
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
A G + +K+L++ P + +I+L ++IS Y + E A++
Sbjct: 298 AKQGFTNTAKQLYKYYPTKDLITL-----------------TAIISSYSEKGDIESAVEC 340
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
++ +L I + H + G H + VK+ ++ V L+ +YSR
Sbjct: 341 FIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSR 400
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
I A + F + + W ++++G G S+A+ LF M P+A T +
Sbjct: 401 FDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASL 460
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPT--LEHY--TCVVDLLGRSGHLHEAEEFIKDMP 561
LS C + G ++I ++ SY + +E + T ++D+ + G L AE+ ++
Sbjct: 461 LSGCCQLG----NLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIK 516
Query: 562 IELDAVVWGALLSA 575
A W A++S
Sbjct: 517 DPCLA-TWNAIISG 529
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 200/499 (40%), Gaps = 96/499 (19%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L ++ LFD+M ++VVSWNTM+ Y + FD+++ M + + T ++S
Sbjct: 208 LEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSA 267
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
A + +HC V+K G+ V + L+ YA AK+++
Sbjct: 268 NAF------PENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYK---------- 311
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
P KD++ T +IS Y++ D E A++ F + +
Sbjct: 312 ---------------------YYPTKDLITLTAIISSYSEKGD-IESAVECFIQTIQL-D 348
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+ V+ F G HG +K G D + LI Y + + A+
Sbjct: 349 IKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAAL 408
Query: 274 RV-YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVY 328
+ YD E P L NS+I+G + G+ DA +F+ ++ + ++I+ S++ G
Sbjct: 409 SLFYDMREKP-LITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQL 467
Query: 329 GQVDDSKRLFEKMPHRSI-------ISLNTMISVIPEME---------RNP--VTWNSMI 370
G + + L + ++ +L M S ++ ++P TWN++I
Sbjct: 468 GNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAII 527
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
SGY L A Y +++ + + TF + AC+ H L
Sbjct: 528 SGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACT-----------HGGL------ 570
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
VY+G ++ ++ + P++ + ++ GL EA+ E +
Sbjct: 571 --VYLGLEYFNIMTKEYGL-----------MPSLQHYACIVALLGKEGLFKEAI---EFI 614
Query: 491 LEQDIVPNAATFVGVLSAC 509
+ +I P++A + +L+AC
Sbjct: 615 NKMEIQPDSAVWGALLNAC 633
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 33/284 (11%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
+ G TA+ L+ P + +++ ++ YS+ + ++ + ++K +
Sbjct: 298 AKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALI 357
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L + G H +KSG V +GL+ Y+ EIE A +F ++ E
Sbjct: 358 GVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREK 417
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ W+ M+ G VQ SDA ++F +M C K
Sbjct: 418 PLITWNSMISGCVQAGKSSDAMELFSEMSM-------------------CGKK------- 451
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
P+ T S++ C +LG G+ +H +++ ++ IG ALI+ Y C
Sbjct: 452 -------PDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGR 504
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
D A +V+ +++PCL N++I+G G A +++L E
Sbjct: 505 LDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQE 548
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 141/337 (41%), Gaps = 60/337 (17%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N I+ R ++ A +LF M + +++WN+M+ G + K +++ L S M
Sbjct: 391 ANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGK 450
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
K + T +++LS C QL +L G+ +H +L++ +F+G+ L+ Y+ C ++ A++
Sbjct: 451 KPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEK 510
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF + + W+ ++ GY L AF + K+ E+
Sbjct: 511 VFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQ---------------------EQ 549
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF------DES 254
LK P++ TF V+ AC HG L+ G E+ +
Sbjct: 550 GLK------------PDKITFLGVLAAC-----------THGGLVYLGLEYFNIMTKEYG 586
Query: 255 IGGALIEFYC-----GCEA-FDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIF 307
+ +L + C G E F A+ +++E P +L+N ++ E +
Sbjct: 587 LMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNACCIQREVKLGECLA 646
Query: 308 NR---LTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ L N Y M YA+ G+ DD R+ E M
Sbjct: 647 KKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVREMM 683
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA---------CSCLGSLQQGQLLHAHLVK 426
N AL ++ + + ++ TFS+L A C +LQ Q+ +K
Sbjct: 26 QNATSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQI-QTQCLK 84
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
++V TSL+D+Y + G + A+ F +S +V +W L+ GYS +G A+ L
Sbjct: 85 RGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQL 144
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
F ML ++ PN T V +L +C L+ +G RS+ +G+
Sbjct: 145 FVDMLRENFKPNQTTIVSLLPSCGCFELIFQG----RSIHGFGI 184
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 189/598 (31%), Positives = 303/598 (50%), Gaps = 108/598 (18%)
Query: 59 YSKWAKFDESLSLVSTMHRS----NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG 114
Y+ +FD SL+L+ ++H S ++KL + S ILS+ NSL+ K
Sbjct: 14 YASAFEFDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATK---------- 63
Query: 115 YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI 174
L+F YA C ++ VFD L
Sbjct: 64 ----------LIFAYAICQHPYHSRLVFDSLQH--------------------------- 86
Query: 175 KMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAF 234
K+V +W LI+GYAK+ E A +LF M S + +P+++T ++ + + LGA
Sbjct: 87 ----KNVFLWNSLINGYAKNRLYNE-AFQLFNQMCSS-DVLPDDFTLSTLSKVSSELGAL 140
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
GK +HG I+ GF D + +++ YC C
Sbjct: 141 FSGKSIHGKSIRIGFVSDTVVANSIMSMYCKC---------------------------- 172
Query: 295 ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
G E++ +F+ +T NS S+N +I GYAV G + +R+F++M R++ S
Sbjct: 173 ---GNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVFDRMKCRNVFS------ 223
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL-AIDRTRSTFSVLFHACSCLGS 413
W +MI+GYV+N ++AL L+ M+ + I+ R + + ACS
Sbjct: 224 -----------WTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSG 272
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMN 472
L G+ +H V+ + V + +L+DMYS+CGS++ A+ F S + +W+++++
Sbjct: 273 LLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMIS 332
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVV 531
GY HG G EA+LL++ ML+ I P+ T VG+LSAC R+GLVNEG+ I+ S + YG+
Sbjct: 333 GYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIE 392
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
PTLE + C+VD+LGR+G L A +FIK MP+E VWGAL+S ++E+ E A +
Sbjct: 393 PTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRF 452
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+ L+ + S YV +SN+YA +W ++R+ + ++K PGCSWI +N++ H F
Sbjct: 453 LIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCF 510
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 216/494 (43%), Gaps = 83/494 (16%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
+R +FD + + V WN+++ GY+K ++E+ L + M S+V ++ T ST+ V ++
Sbjct: 77 SRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSE 136
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L +L GK IH ++ G+ V + ++ Y C EE+++VFDE+ N W+++
Sbjct: 137 LGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVL 196
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ GY + VF +M ++V WT +I+GY ++ D ++AL LFR M+ P
Sbjct: 197 IAGYAVSGNLVVGRRVFDRMKCRNVFSWTAMINGYVENGDS-DEALSLFRDMQVIDGIEP 255
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
N + SV+ AC+ G+ +HG ++ + S+ ALI+ Y C + D A RV+
Sbjct: 256 NRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVF 315
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
ED L ++IS++SMI GY ++G+ ++
Sbjct: 316 ------------------------EDDSLC------KDAISWSSMISGYGLHGKGQEAIL 345
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT-MRKLAID 395
L++KM I P+M +T ++S ++ L + L +Y + + I+
Sbjct: 346 LYDKMLQAGI---------RPDM----ITTVGILSACSRSGLVNEGLNIYSSVINDYGIE 392
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
T F AC +VDM R G ++ A
Sbjct: 393 PTLEIF-----AC------------------------------IVDMLGRAGQLDPALDF 417
Query: 456 FSSIS-SPNVAAWTALMNGYSHHG--LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
++ P + W AL++ HG E F I LE + N + + ++ R
Sbjct: 418 IKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRW 477
Query: 513 GLVNEGMKIFRSMK 526
V E ++ + +
Sbjct: 478 DAVAEVRRMMKDKR 491
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 150/345 (43%), Gaps = 46/345 (13%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-S 78
S N I +G LV R +FD+M R V SW M+ GY + DE+LSL M
Sbjct: 192 SWNVLIAGYAVSGNLVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVID 251
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
++ N + ++L C+ + L+ G+QIH ++ + + L+ Y+ C ++ A
Sbjct: 252 GIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSA 311
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+RVF ED+ L KD + W+ +ISGY G
Sbjct: 312 RRVF----EDDSLC--------------------------KDAISWSSMISGYGLHGKG- 340
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK-CGFEFDESIGG 257
++A+ L+ M ++G P+ T ++ AC+R G EG ++ +I G E I
Sbjct: 341 QEAILLYDKMLQAGIR-PDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFA 399
Query: 258 ALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRLTE---- 312
+++ D A+ + P + +L++ I G +E EL + L +
Sbjct: 400 CIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPE 459
Query: 313 --ANSISYNSMIKGYAVYGQVDDSKRLFE-----KMPHRSIISLN 350
+N +S +++ + V + +R+ + K+P S IS+N
Sbjct: 460 NPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISIN 504
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 189/685 (27%), Positives = 341/685 (49%), Gaps = 71/685 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I S N ++ +G L A++LF P R +W M+ ++ + ++LSL M
Sbjct: 74 IFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 133
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V + T +T+L++ +H +K G + FV + LL
Sbjct: 134 EGVIPDRVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHVFVCNTLL----------- 177
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
Y + L++ A VF++M KD V + ++ G +K +G
Sbjct: 178 --------------------DAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSK--EG 215
Query: 198 CE-KALKLFRWMRESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+AL+LF MR +G +P +TF S++ A + G VH L+++ + +
Sbjct: 216 LHTQALQLFAAMRRAG--IPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFV 273
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
+L++FY C+ D R++D + N S ++I + + A + E
Sbjct: 274 NNSLLDFYSKCDCLDDMRRLFDEMPERD-NVSYNVIIAAYAWNQC--AATVLRLFREMQK 330
Query: 316 ISYNSMIKGYA----VYGQVDD---SKRLFEKMPHRSIISLNTMISVIPEM--------- 359
+ ++ + YA V G + D K++ ++ + S + + + + +M
Sbjct: 331 LGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDA 390
Query: 360 ---------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
E++ ++W ++I+GYVQN HE+ALQL+ MR+ + R+TFS + A S
Sbjct: 391 AKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSS 450
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L + G+ LH++L+++ ++S+V+ G+ LVDMY++CG +++A +F + N +W A+
Sbjct: 451 LAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAV 510
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYG 529
++ Y+H+G A+ +FE ML P++ TF+ VL+AC GL +E MK F MK Y
Sbjct: 511 ISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYS 570
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ P EHY CV+D LGR G + ++ + +MP + D ++W ++L +C N E+ AA
Sbjct: 571 ISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAA 630
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
K+FG++ + YVILSNIYA G+W ++K + V+K+ G SW+E+ ++++F
Sbjct: 631 DKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSF 690
Query: 650 SVEDRNNPNCNVIYATLEHLTANLN 674
+ D +P + I L+ L ++
Sbjct: 691 ASNDLTSPMIDEIKDELDRLYKEMD 715
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 217/505 (42%), Gaps = 64/505 (12%)
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
++K+G++ + + L + + A+ +FD++ N +L+L Y + A
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+F+ P ++ WT ++ +A + AL LFR M G +P+ T +V+
Sbjct: 94 QHLFLSSPHRNATTWTIMMRAHA-AAGRTSDALSLFRAMLGEGV-IPDRVTVTTVLNLPG 151
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
C +H IK G + + L++ YC A RV+ + + N+
Sbjct: 152 -----CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNA 206
Query: 290 LINGLISMGRIEDAELIFNRLTEA------------------------------------ 313
++ G G A +F + A
Sbjct: 207 MMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRST 266
Query: 314 ---NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
N NS++ Y+ +DD +RLF++MP ER+ V++N +I
Sbjct: 267 SVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMP-----------------ERDNVSYNVII 309
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
+ Y N L+L+ M+KL DR ++ + L + G+ +HA LV
Sbjct: 310 AAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLA 369
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
S +G +L+DMYS+CG ++ A+++FS+ S + +WTAL+ GY +G EA+ LF M
Sbjct: 370 SEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDM 429
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
+ P+ ATF ++ A ++ G ++ + G ++ + +VD+ + G L
Sbjct: 430 RRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCL 489
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
EA +MP E +++ W A++SA
Sbjct: 490 DEALRTFDEMP-ERNSISWNAVISA 513
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 130/559 (23%), Positives = 233/559 (41%), Gaps = 96/559 (17%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T + N + ++G L AR +F +M + V++N M+ G SK ++L L +
Sbjct: 167 DTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAA 226
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M R+ + TFS+IL+V A + L+ G Q+H LVL+S FV + LL FY+ C
Sbjct: 227 MRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDC 286
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+++ +R+FDE MP++D V + +I+ YA +
Sbjct: 287 LDDMRRLFDE-------------------------------MPERDNVSYNVIIAAYAWN 315
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
L+LFR M++ G + + +++ L GK +H L+ G ++
Sbjct: 316 -QCAATVLRLFREMQKLGFDR-QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA- 313
+G ALI+ Y C D A + + +LI G + G+ E+A +F+ + A
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433
Query: 314 ---NSISYNSMIKG-----------------------------------YAVYGQVDDSK 335
+ +++S+IK YA G +D++
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
R F++MP ERN ++WN++IS Y + A++++ M +
Sbjct: 494 RTFDEMP-----------------ERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFN 536
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG--TSLVDMYSRCGSINDAQ 453
TF + ACS G L + + HL+K + + + ++D R G + Q
Sbjct: 537 PDSVTFLSVLAACSHNG-LADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQ 595
Query: 454 ASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC-VR 511
+ + WT++++ HG A + + + + P AT +LS R
Sbjct: 596 KMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGME--PTDATPYVILSNIYAR 653
Query: 512 AGLVNEGMKIFRSMKSYGV 530
AG + + + M+ GV
Sbjct: 654 AGQWEDAACVKKIMRDRGV 672
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 193/472 (40%), Gaps = 68/472 (14%)
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A ++D++ + + + N +++ S G + A+ +F N+ ++ M++ +A G+
Sbjct: 62 ARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRT 121
Query: 332 DDSKRLFEKM------PHRSIIS--LNTMISVIPEM------------------------ 359
D+ LF M P R ++ LN +P +
Sbjct: 122 SDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYC 181
Query: 360 ----------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
+++ VT+N+M+ G + LH +ALQL+ MR+ I T TFS
Sbjct: 182 KHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSS 241
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ + + L G +HA ++++ NV+V SL+D YS+C ++D + F + +
Sbjct: 242 ILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERD 301
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
++ ++ Y+ + + + LF M + + +LS V+ G +I
Sbjct: 302 NVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHA 361
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS--------- 574
+ G+ ++D+ + G L A+ + E A+ W AL++
Sbjct: 362 QLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALITGYVQNGQHE 420
Query: 575 -ACWFWMNM-EVGERAAQKMFGLDKKPISAYVILS---NIYAVLGKWGKKMDIRKRLTHL 629
A + +M G R + F K S+ ++ +++ L + G K + +
Sbjct: 421 EALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLV 480
Query: 630 EVKKDPGCSWIELNSRVHAFS-VEDRNNPNCNVIYATLEHLTANLNSVVLFD 680
++ GC L+ + F + +RN+ + N + + H N++ +F+
Sbjct: 481 DMYAKCGC----LDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFE 528
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 128/320 (40%), Gaps = 27/320 (8%)
Query: 291 INGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
+ L+S G + A +F+++ N S N ++ Y+ G + ++ LF PHR
Sbjct: 50 LRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHR------ 103
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
N TW M+ + AL L+ M + R T + + + C
Sbjct: 104 -----------NATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGC 152
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
LH +K +++V+V +L+D Y + G + A+ F + + + A+
Sbjct: 153 -----TVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAM 207
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
M G S GL ++A+ LF M I TF +L+ + G ++ +
Sbjct: 208 MMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTS 267
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA-CWFWMNMEVGE--R 587
V + ++D + L + +MP E D V + +++A W V R
Sbjct: 268 VLNVFVNNSLLDFYSKCDCLDDMRRLFDEMP-ERDNVSYNVIIAAYAWNQCAATVLRLFR 326
Query: 588 AAQKMFGLDKKPISAYVILS 607
QK+ G D++ + +LS
Sbjct: 327 EMQKL-GFDRQVLPYATMLS 345
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 179/564 (31%), Positives = 304/564 (53%), Gaps = 31/564 (5%)
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM-PKKDVVV 183
L+ A + +A+++FD + + + W+ ++ Y + ++ DA ++F + +++VV
Sbjct: 48 LIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDRPDARRNVVT 107
Query: 184 WTKLISGYAKS--VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
WT L+SGYA++ VD E LF+ M + N+ + T A R+G C
Sbjct: 108 WTALLSGYARARLVDEAEA---LFQRMPQ--RNVVSWNTMLEAYAAAGRVGDAC------ 156
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
L + D L+ + D A ++ R+ + A ++++G+ G+++
Sbjct: 157 ALFDRMPVR-DAGSWNILLATLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGKVD 215
Query: 302 DAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS------- 354
+A ++F+ + E N +S+N+MI GY ++D++ LF KMP R I S N M++
Sbjct: 216 EARVLFDSMPERNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKD 275
Query: 355 ------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
+ EM ERN VTW +M++GY++ E AL L+ M + TF A
Sbjct: 276 LKRARELFDEMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDA 335
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CS L +L +G+ +H + KT F+ + +V ++L+++Y++CG I A+ F ++ +W
Sbjct: 336 CSDLAALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISW 395
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
++ Y+HHG+G EA+LL+E M E PN T+V +LSAC +GLV+EG+KIF SM
Sbjct: 396 NGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVN 455
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE-LDAVVWGALLSACWFWMNMEVG 585
+ EHYTC++DL R+G L +A+ I + I+ VW ALL C N +G
Sbjct: 456 DRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIG 515
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
AA+ + + Y +LSNIYA GKW + +IR + + +KK PGCSWIE+ ++
Sbjct: 516 NLAARNLLQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANK 575
Query: 646 VHAFSVEDRNNPNCNVIYATLEHL 669
VH F D+++ ++IY L+++
Sbjct: 576 VHVFVARDKSHSESDLIYGLLQNI 599
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 221/505 (43%), Gaps = 88/505 (17%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPI-RTVVSWNTMLCGYSKWAKFDESLSL 71
T + +VS ++ R G L AR LFD+ R VV+W +L GY++ DE+ +L
Sbjct: 68 TPDWDVVSWTALVSAYARRGMLRDARELFDRPDARRNVVTWTALLSGYARARLVDEAEAL 127
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIH---------------CLVLKSGY- 115
M + NV +++T+L A + D + +++SG
Sbjct: 128 FQRMPQRNV----VSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRSGSV 183
Query: 116 -ECFEFVG----------SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
+ E G + ++ A +++EA+ +FD + E N + W+ M+ GY + +
Sbjct: 184 DKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMISGYTRNH 243
Query: 165 LMSDAFDVFIKMPKKD-------------------------------VVVWTKLISGYAK 193
+ +A D+F+KMP++D VV WT +++GY K
Sbjct: 244 RIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTMMNGYLK 303
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
E AL LF M +G PN+ TF + AC+ L A CEGK VH ++ K F+FD
Sbjct: 304 GKQ-SELALGLFSGMLMAGTR-PNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQFDA 361
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE- 312
+ AL+ Y C A +++D L + N +I G +A L++ ++ E
Sbjct: 362 FVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAILLYEKMQEN 421
Query: 313 ---ANSISYNSMIKGYAVYGQVDDSKRLFEKMPH-RSIISLNTMISVIPEMERNPVTWNS 368
N ++Y ++ + G VD+ ++FE M + RSI + + + ++
Sbjct: 422 GYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDL--------C 473
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT- 427
+G + + K L Y+ ++ + S +S L C+ G+ G L +L++
Sbjct: 474 SRAGRLDD---AKRLIHYLKIKPA----SGSVWSALLGGCNAHGNESIGNLAARNLLQAE 526
Query: 428 PFESNVYVGTSLVDMYSRCGSINDA 452
P + Y T L ++Y+ G +A
Sbjct: 527 PDNAGTY--TLLSNIYASAGKWKEA 549
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 139/291 (47%), Gaps = 39/291 (13%)
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N LI L + GR+ DA +F+ + + +S+ +++ YA G + D++ LF++
Sbjct: 46 NRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDR------- 98
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
P+ RN VTW +++SGY + L ++A L+ M + R +++ + A
Sbjct: 99 ---------PDARRNVVTWTALLSGYARARLVDEAEALFQRMPQ----RNVVSWNTMLEA 145
Query: 408 CSCLGSLQQGQLLHAHL-VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
+ G + L + V+ N+ + T + R GS++ A+ F + +V A
Sbjct: 146 YAAAGRVGDACALFDRMPVRDAGSWNILLATLV-----RSGSVDKARELFGRMPERDVMA 200
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
WT +++G + G EA +LF+ M E+++V ++ ++S R ++E + +F M
Sbjct: 201 WTTMVDGVARSGKVDEARVLFDSMPERNVV----SWNAMISGYTRNHRIDEALDLFMKM- 255
Query: 527 SYGVVPTLEHYTCVVDLLG--RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
P + +C + + G ++ L A E +MP E + V W +++
Sbjct: 256 -----PERDIASCNIMVTGFIQNKDLKRARELFDEMP-ERNVVTWTTMMNG 300
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/586 (30%), Positives = 290/586 (49%), Gaps = 82/586 (13%)
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L CA+ S GK++HC ++K+G + + + + L+ Y
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYG-------------------- 49
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+C L+ DA ++F ++P +D + W +++ ++ + L +F M +
Sbjct: 50 -----------KCGLIQDALNLFNQLPHRDPISWASILTANNQA-NLPHLTLSMFPAMFK 97
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
P+ Y F +++ACA LGA +GK VH I D+ + +L++ Y C
Sbjct: 98 QDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKC---- 153
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
GL +GR+ +F+ ++ NSIS+ +MI GYA G+
Sbjct: 154 ----------------------GLPDIGRV-----VFDSISSKNSISWTAMISGYAQSGR 186
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
D+ +LF+KMP ++++S W ++ISG VQ+ + L+M MR
Sbjct: 187 KLDAIQLFQKMPVKNLLS-----------------WTALISGLVQSGNWVDSFYLFMEMR 229
Query: 391 KLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
ID S + A + L L G+ +H ++ +ES+++V +LVDMY++C +
Sbjct: 230 SKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDV 289
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
A+ F + ++ +WT+++ G + HGL EA+ L+ ML + PN TFVG++ AC
Sbjct: 290 LAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYAC 349
Query: 510 VRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
GLV++G F SM K YG+ P+L+HYTC++DLL RSGHL EAE IK MP + D
Sbjct: 350 SHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEAT 409
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W ALLSAC N +G R A + L + S Y++LSNIYA W +R+ +
Sbjct: 410 WAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAA 469
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+EVKK+PG S I L F + ++P I+ LE L A +
Sbjct: 470 MEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEMK 515
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 161/326 (49%), Gaps = 6/326 (1%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN- 79
+N I G+ G + A NLF+Q+P R +SW ++L ++ +LS+ M + +
Sbjct: 41 SNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDG 100
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
++ + F+ ++ CA L ++ GKQ+H + S + V S L+ YA C + +
Sbjct: 101 LQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGR 160
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VFD + N + W+ M+ GY Q DA +F KMP K+++ WT LISG +S + +
Sbjct: 161 VVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVD 220
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+ LF MR G ++ + + S+I A A L GK +H L+I G+E + AL
Sbjct: 221 -SFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNAL 279
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANS 315
++ Y C A +++ R+ + + S+I G G E+A ++NR+ + N
Sbjct: 280 VDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNE 339
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKM 341
+++ +I + G V + F M
Sbjct: 340 VTFVGLIYACSHVGLVSKGRYFFNSM 365
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 39/247 (15%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
+S I+ ++G+ + A LF +MP++ ++SW ++ G + + +S L M
Sbjct: 172 ISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSK 231
Query: 79 NVKL-NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + + S+I+ A L L GKQIHCLV+ GYE FV + L+ YA C ++
Sbjct: 232 GIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLA 291
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AK++F + + + + W+ ++VG Q L
Sbjct: 292 AKKIFGRMVQRDIVSWTSIIVGTAQHGL-------------------------------- 319
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E+AL L+ M +G PNE TF +I AC+ +G +G+ +IK D I
Sbjct: 320 AEEALSLYNRMLSTGLK-PNEVTFVGLIYACSHVGLVSKGRYFFNSMIK-----DYGINP 373
Query: 258 ALIEFYC 264
+L + C
Sbjct: 374 SLQHYTC 380
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 51/94 (54%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS 70
L+ E+ + +N + + ++ A+ +F +M R +VSW +++ G ++ +E+LS
Sbjct: 266 LLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALS 325
Query: 71 LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
L + M + +K NE TF ++ C+ + + G+
Sbjct: 326 LYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGR 359
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 326/654 (49%), Gaps = 87/654 (13%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL-VSTMHRSNVKLNETTF 87
G L +R LF Q+ + WNTM+ GYS+ E++ L +S + + N TF
Sbjct: 55 GSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTF 114
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
+L+ CA+L+SL G ++H ++K G+E FV + L+ Y+ + A+ +FDE
Sbjct: 115 PFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDE--- 171
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
SL+ +D+V + +I GYA+ V+ E AL LF
Sbjct: 172 ------SLV----------------------RDLVSYNTMIKGYAE-VNQPESALCLFGE 202
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI--GGALIEFYCG 265
M+ SG +P+E+TF ++ C+ L GK +H + K D +I A+++ Y
Sbjct: 203 MQNSG-ILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAK 261
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
C + A RV+ +MG T ++ +++SM+ GY
Sbjct: 262 CGLINIAERVFS------------------TMG------------TSKSAAAWSSMVCGY 291
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
A G+++ +++LF M R +IS MI SGY Q +AL+L
Sbjct: 292 ARCGEINVARKLFNHMHERDVISWTAMI-----------------SGYSQAGQCSEALEL 334
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ-LLHAHLVKTPFESNVYVGTSLVDMYS 444
+ M L I T + AC+ LG+ G+ L H ++ F N + +++DMY+
Sbjct: 335 FKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYA 394
Query: 445 RCGSINDAQASFSSISSPNVAAWT--ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
+CGSI+ A F + + +++ G + HGLG A+ +F ++ + P+ TF
Sbjct: 395 KCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTF 454
Query: 503 VGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
VGVL AC +GL+ EG K+F SM +YG+ P +EHY C+VDLLGR G L EA + ++ MP
Sbjct: 455 VGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMP 514
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
E ++V+W ALLSAC N+++GE A QK+ ++ + + YV+LSNI A +W +
Sbjct: 515 FEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQ 574
Query: 622 IRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
+RK + ++K PG S+IEL +H F D+++P I L+ + L S
Sbjct: 575 VRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKS 628
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 36/215 (16%)
Query: 28 CG--RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
CG R G++ AR LF+ M R V+SW M+ GYS+ + E+L L M +K +E
Sbjct: 289 CGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEV 348
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T +LS CA+L + GK+++ +++G VF++
Sbjct: 349 TLVAVLSACARLGAFDLGKRLYHQYIENG--------------------------VFNQ- 381
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK--KDVVVWTKLISGYAKSVDGCEKALK 203
N +L + ++ Y +C + A ++F ++ K K V+ +I+G A+ G E A+
Sbjct: 382 ---NTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLG-ETAIT 437
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+FR + +G P+E TF V+ AC G EGK
Sbjct: 438 VFRELISTGLK-PDEVTFVGVLCACGHSGLIEEGK 471
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS---INDAQASFSSISSPNVAAWTA 469
S +QG +HA + ++ + L+ +S GS ++ ++ FS I PN+ W
Sbjct: 21 SFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNT 80
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIV-PNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
++ GYS EA++L+ M+ + I PN TF +L++C R + G ++ + +
Sbjct: 81 MIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKH 140
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEA-----EEFIKDM 560
G L ++ L G+L+ A E ++D+
Sbjct: 141 GFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDL 177
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 185/611 (30%), Positives = 301/611 (49%), Gaps = 52/611 (8%)
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
++ E F T+L C L QI ++ G E +FV + + I A++
Sbjct: 9 RIVEEKFITLLRSCKNYERL---HQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARK 65
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+FD K+P+ + W + GY ++ +
Sbjct: 66 LFD-------------------------------KIPQPNTATWNAMFRGYLQNGHHRDT 94
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
+ R +G MPN +TF +I++C +L EG+ VH K GF+ + + +LI
Sbjct: 95 VVLFGELNRIAG--MPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLI 152
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNS 320
+ Y + A +V+ + + ++ING I G + +F+ E + + ++
Sbjct: 153 DMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMWSV 212
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEM-ERNPVTW 366
+I GY + ++ LF+KMP+R +S N M++ V EM ERN +W
Sbjct: 213 LISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSW 272
Query: 367 NSMISGYVQNNLHEKALQLYMTMR-KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
N +I GYV+N L + L+ + M + + T + ACS LG+L G+ +H +
Sbjct: 273 NGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAE 332
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
++ N++VG L+DMY++CG I +A F+ + ++ +W ++NG + HG +A+
Sbjct: 333 SIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALG 392
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
+F+ M + P+ TFVG+LSAC GLV +G F+SM Y +VP +EHY C+VDLL
Sbjct: 393 MFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLL 452
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L +A FI+ MPIE DAV+W ALL AC + N+E+ E A Q++ L+ + +V
Sbjct: 453 GRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIELEPNNPANFV 512
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
++SNIY LG+ ++ + +K PGCS IE N V F D + IY
Sbjct: 513 MVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYR 572
Query: 665 TLEHLTANLNS 675
L+ LT L S
Sbjct: 573 VLKGLTMLLRS 583
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 218/493 (44%), Gaps = 85/493 (17%)
Query: 2 KLYATQSQ--TLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGY 59
+L+ Q+Q T + V+ N IT C R ++ AR LFD++P +WN M GY
Sbjct: 27 RLHQIQAQIVTHGLEHNDFVAPN-FITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGY 85
Query: 60 SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
+ +++ L ++R N TF I+ C +L + +G+++HC K G++
Sbjct: 86 LQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNS 145
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
FV + L+ Y+ +E+A +VF E+HE N ++W+ ++ GY+ C + +F P++
Sbjct: 146 FVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPER 205
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRE---------------SGE---------NM 215
DVV+W+ LISGY +S + A +LF M +GE M
Sbjct: 206 DVVMWSVLISGYIESKN-MAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEM 264
Query: 216 P--NEYTFDSVIRACARLGAFCEG------KVVHGLLIKCGFE----------------- 250
P N ++++ +I + G F E +V G +I F
Sbjct: 265 PERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMG 324
Query: 251 -----FDESI--------GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
+ ESI G LI+ Y C + A+ V++ L+ + + N++INGL
Sbjct: 325 KWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIH 384
Query: 298 GRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
G DA +F+R+ E + +++ ++ G V D F+ M
Sbjct: 385 GHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDH--------Y 436
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
S++P++E + M+ + L ++AL +RK+ I+ ++ L AC +
Sbjct: 437 SIVPQIEH----YGCMVDLLGRAGLLDQALNF---IRKMPIEPDAVIWAALLGACRLYKN 489
Query: 414 LQQGQLLHAHLVK 426
++ +L L++
Sbjct: 490 VEIAELALQRLIE 502
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 175/603 (29%), Positives = 308/603 (51%), Gaps = 53/603 (8%)
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L C N + K++H ++K +V L+ ++ C ++ A VF+++ + N
Sbjct: 30 LHKCTDFNHI---KEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNV 86
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
L++ ++ +VQ + AF F M K +
Sbjct: 87 HLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFA--------------------------- 119
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY--CGCEA 268
+ +T+ +++AC G +++H + K GF D + +LI+ Y CG
Sbjct: 120 ------DNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLG 173
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
+ AM+++ + L + NS+I GL+ G + A +F+ + E +++S+N+++ GY
Sbjct: 174 VNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKA 233
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMIS---VIPEME-----------RNPVTWNSMISGYV 374
G++ + LFEKMP R+++S +TM+S +ME +N VTW +ISG+
Sbjct: 234 GEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFA 293
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
+ L ++A LY M + T + AC+ G L G+ +HA + K + +V
Sbjct: 294 EKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVN 353
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
V +LVDMY++CG ++ A + F+ +S ++ +W ++ G + HG G +A+ LF M ++
Sbjct: 354 VSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEG 413
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
P+ T + +L AC AG V++G+ F SM + +G+VP +EHY C++DLLGR G L EA
Sbjct: 414 FKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEA 473
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
++ MP+E + V+WG LL AC + + E+ ++ L++ Y +LSNI+A
Sbjct: 474 FRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLSNIFAAA 533
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
G W ++R ++ V+K G S IEL+ VH F+V D+++P + IY L L +L
Sbjct: 534 GDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHPETDKIYQILVKLGQDL 593
Query: 674 NSV 676
V
Sbjct: 594 KQV 596
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 147/328 (44%), Gaps = 64/328 (19%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS + ++ + G + AR LFD+MP + +V+W ++ G+++ E+ +L +
Sbjct: 248 ERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQ 307
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M + +K ++ T +IL+ CA+ L+ GK++H + K +C V + L+ YA C
Sbjct: 308 MEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGR 367
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+++A +F+E M +D+V W ++ G A
Sbjct: 368 VDKALSIFNE-------------------------------MSMRDLVSWNCMLQGLAMH 396
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
G EKA++LF M++ G P++ T +++ AC G V GL E D
Sbjct: 397 GHG-EKAIQLFSKMQQEGFK-PDKVTLIAILCACTHAGF-----VDQGLSYFNSMERDHG 449
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEA 313
I IE Y GC +I+ L GR+E+A L+ + E
Sbjct: 450 I-VPHIEHY-GC-----------------------MIDLLGRGGRLEEAFRLVQSMPMEP 484
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKM 341
N + + +++ V+ V ++++ +++
Sbjct: 485 NDVIWGTLLGACRVHNAVPLAEKVLDRL 512
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 157/406 (38%), Gaps = 103/406 (25%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS N I + G L AR LFD+M R VSWNT+L GY K + ++ +L
Sbjct: 186 EKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEK 245
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M NV ++ST++S Y +
Sbjct: 246 MPERNV----VSWSTMVSG-----------------------------------YCKTGD 266
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+E A+ +FD++ N + W++++ G+ + L +A ++ +M
Sbjct: 267 MEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQM------------------ 308
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
E+ P++ T S++ ACA G GK VH + K + +
Sbjct: 309 ---------------EAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVN 353
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-- 312
+ AL++ Y C D A+ +++ + L + N ++ GL G E A +F+++ +
Sbjct: 354 VSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEG 413
Query: 313 --ANSISYNSMIKGYAVYGQVDDSKRLFEKM-------PHRSIISLNTMISVIPE----- 358
+ ++ +++ G VD F M PH I MI ++
Sbjct: 414 FKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPH--IEHYGCMIDLLGRGGRLE 471
Query: 359 ----------MERNPVTWNSMISGYVQNN---LHEKALQLYMTMRK 391
ME N V W +++ +N L EK L +T+ +
Sbjct: 472 EAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQ 517
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 308/598 (51%), Gaps = 55/598 (9%)
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L+ Q SL QIH ++ + Y F+ + L+ YA C + +A +F H
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHH- 206
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
K +V WT LI+ + + +AL LF MR
Sbjct: 207 ----------------------------FKTIVTWTSLIT-HLSHFNMHLQALSLFNQMR 237
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
SG PN++TF S++ A A G+ +H L+ K GF+ + +G AL++ Y C
Sbjct: 238 CSGP-YPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADM 296
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-----ANSISYNSMIKG 324
A+RV+D++ L + NS+I G + A +F + N +S +S++
Sbjct: 297 HSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSA 356
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTW 366
A G ++ +++ + ++ L +++ + +M +R+ VTW
Sbjct: 357 CANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTW 416
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N ++ G+VQN+ E+A + MR+ I ++FS + H+ + L +L QG +H ++K
Sbjct: 417 NVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIK 476
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ N+ + SL+ MY++CGS+ DA F I NV +WTA+++ Y HG ++ + L
Sbjct: 477 LGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIEL 536
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLG 545
FE ML + I P+ TFV VLSAC G V EG+ F SMK + + P EHY C+VDLLG
Sbjct: 537 FEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLG 596
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G L EA+ FI+ MP++ VWGALL AC + N+++G AA+++F ++ YV+
Sbjct: 597 RAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVL 656
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
L+N+ G+ + ++R+ + V+K+PGCSWI++ + F+ DR++ + + IY
Sbjct: 657 LANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIY 714
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 235/514 (45%), Gaps = 67/514 (13%)
Query: 46 IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQ 105
+T+V+W +++ S + ++LSL + M S N+ TFS+ILS A ++ G+Q
Sbjct: 207 FKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQ 266
Query: 106 IHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNL 165
+H L+ K G++ FVG+ L+ YA C ++ A RVFD++ E N + W+ M+VG+ NL
Sbjct: 267 LHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNL 326
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
A VF + ++ V+ PNE + SV+
Sbjct: 327 YDRAVGVFKDVLREKTVI--------------------------------PNEVSVSSVL 354
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
ACA +G G+ VHG+++K G + +L++ Y C FD ++++ + + +
Sbjct: 355 SACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVV 414
Query: 286 ASNSLINGLISMGRIEDA---------------ELIFNRLTEANSISYNSMIKGYAVYGQ 330
N L+ G + + E+A E F+ + + S S ++ +G A++ Q
Sbjct: 415 TWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHS-SASLAALHQGTAIHDQ 473
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEM--------ERNPVTWNSMISGYVQNNLHEKA 382
+ + S+I++ + + + N ++W +MIS Y + +
Sbjct: 474 IIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQV 533
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG--TSLV 440
++L+ M I+ + TF + ACS G +++G L H + +K + N +V
Sbjct: 534 IELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG-LAHFNSMKKIHDMNPGPEHYACMV 592
Query: 441 DMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIV 496
D+ R G +++A+ S+ P + W AL+ +G +G EA E + E +
Sbjct: 593 DLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAA---ERLFEMEPY 649
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
N +V + + C R+G + E ++ R M GV
Sbjct: 650 -NPGNYVLLANMCTRSGRLEEANEVRRLMGVNGV 682
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 35/199 (17%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
LF + R VV+WN ++ G+ + KF+E+ + M R + +E +FST+L A L +
Sbjct: 404 LFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAA 463
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
L G IH ++K GY + L+ YA C + +A +VF+ + + N
Sbjct: 464 LHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHN---------- 513
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNE 218
V+ WT +IS Y + GC + ++LF M G P+
Sbjct: 514 ---------------------VISWTAMISAY--QLHGCANQVIELFEHMLSEGIE-PSH 549
Query: 219 YTFDSVIRACARLGAFCEG 237
TF V+ AC+ G EG
Sbjct: 550 VTFVCVLSACSHTGRVEEG 568
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 189/685 (27%), Positives = 341/685 (49%), Gaps = 71/685 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I S N ++ +G L A++LF P R +W M+ ++ + ++LSL M
Sbjct: 74 IFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 133
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V + T +T+L++ +H +K G + FV + LL
Sbjct: 134 EGVIPDRVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHVFVCNTLL----------- 177
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
Y + L++ A VF++M KD V + ++ G +K +G
Sbjct: 178 --------------------DAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSK--EG 215
Query: 198 CE-KALKLFRWMRESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+AL+LF MR +G +P +TF S++ A + G VH L+++ + +
Sbjct: 216 LHTQALQLFAAMRRAG--IPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFV 273
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
+L++FY C+ D R++D + N S ++I + + A + E
Sbjct: 274 NNSLLDFYSKCDCLDDMRRLFDEMPERD-NVSYNVIIAAYAWNQC--AATVLRLFREMQK 330
Query: 316 ISYNSMIKGYA----VYGQVDD---SKRLFEKMPHRSIISLNTMISVIPEM--------- 359
+ ++ + YA V G + D K++ ++ + S + + + + +M
Sbjct: 331 LGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDA 390
Query: 360 ---------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
E++ ++W ++I+GYVQN HE+ALQL+ MR+ + R+TFS + A S
Sbjct: 391 AKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSS 450
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L + G+ LH++L+++ ++S+V+ G+ LVDMY++CG +++A +F + N +W A+
Sbjct: 451 LAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAV 510
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYG 529
++ Y+H+G A+ +FE ML P++ TF+ VL+AC GL +E MK F MK Y
Sbjct: 511 ISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYS 570
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ P EHY CV+D LGR G + ++ + +MP + D ++W ++L +C N E+ AA
Sbjct: 571 ISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAA 630
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
K+FG++ + YVILSNIYA G+W ++K + V+K+ G SW+E+ ++++F
Sbjct: 631 DKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSF 690
Query: 650 SVEDRNNPNCNVIYATLEHLTANLN 674
+ D +P + I L+ L ++
Sbjct: 691 ASNDLTSPMIDEIKDELDRLYKEMD 715
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 217/505 (42%), Gaps = 64/505 (12%)
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
++K+G++ + + L + + A+ +FD++ N +L+L Y + A
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+F+ P ++ WT ++ +A + AL LFR M G +P+ T +V+
Sbjct: 94 QHLFLSSPHRNATTWTIMMRAHA-AAGRTSDALSLFRAMLGEGV-IPDRVTVTTVLNLPG 151
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
C +H IK G + + L++ YC A RV+ + + N+
Sbjct: 152 -----CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNA 206
Query: 290 LINGLISMGRIEDAELIFNRLTEA------------------------------------ 313
++ G G A +F + A
Sbjct: 207 MMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRST 266
Query: 314 ---NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
N NS++ Y+ +DD +RLF++MP ER+ V++N +I
Sbjct: 267 SVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMP-----------------ERDNVSYNVII 309
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
+ Y N L+L+ M+KL DR ++ + L + G+ +HA LV
Sbjct: 310 AAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLA 369
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
S +G +L+DMYS+CG ++ A+++FS+ S + +WTAL+ GY +G EA+ LF M
Sbjct: 370 SEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDM 429
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
+ P+ ATF ++ A ++ G ++ + G ++ + +VD+ + G L
Sbjct: 430 RRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCL 489
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
EA +MP E +++ W A++SA
Sbjct: 490 DEALRTFDEMP-ERNSISWNAVISA 513
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 130/559 (23%), Positives = 233/559 (41%), Gaps = 96/559 (17%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T + N + ++G L AR +F +M + V++N M+ G SK ++L L +
Sbjct: 167 DTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAA 226
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M R+ + TFS+IL+V A + L+ G Q+H LVL+S FV + LL FY+ C
Sbjct: 227 MRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDC 286
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+++ +R+FDE MP++D V + +I+ YA +
Sbjct: 287 LDDMRRLFDE-------------------------------MPERDNVSYNVIIAAYAWN 315
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
L+LFR M++ G + + +++ L GK +H L+ G ++
Sbjct: 316 -QCAATVLRLFREMQKLGFDR-QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA- 313
+G ALI+ Y C D A + + +LI G + G+ E+A +F+ + A
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433
Query: 314 ---NSISYNSMIKG-----------------------------------YAVYGQVDDSK 335
+ +++S+IK YA G +D++
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
R F++MP ERN ++WN++IS Y + A++++ M +
Sbjct: 494 RTFDEMP-----------------ERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFN 536
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG--TSLVDMYSRCGSINDAQ 453
TF + ACS G L + + HL+K + + + ++D R G + Q
Sbjct: 537 PDSVTFLSVLAACSHNG-LADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQ 595
Query: 454 ASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC-VR 511
+ + WT++++ HG A + + + + P AT +LS R
Sbjct: 596 KMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGME--PTDATPYVILSNIYAR 653
Query: 512 AGLVNEGMKIFRSMKSYGV 530
AG + + + M+ GV
Sbjct: 654 AGQWEDAACVKKIMRDRGV 672
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/472 (19%), Positives = 193/472 (40%), Gaps = 68/472 (14%)
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A ++D++ + + + N +++ S G + A+ +F N+ ++ M++ +A G+
Sbjct: 62 ARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRT 121
Query: 332 DDSKRLFEKM------PHRSIIS--LNTMISVIPEM------------------------ 359
D+ LF M P R ++ LN +P +
Sbjct: 122 SDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYC 181
Query: 360 ----------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
+++ VT+N+M+ G + LH +ALQL+ MR+ I T TFS
Sbjct: 182 KHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSS 241
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ + + L G +HA ++++ NV+V SL+D YS+C ++D + F + +
Sbjct: 242 ILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERD 301
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
++ ++ Y+ + + + LF M + + +LS V+ G +I
Sbjct: 302 NVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHA 361
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS--------- 574
+ G+ ++D+ + G L A+ + E A+ W AL++
Sbjct: 362 QLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALITGYVQNGQHE 420
Query: 575 -ACWFWMNM-EVGERAAQKMFGLDKKPISAYVILS---NIYAVLGKWGKKMDIRKRLTHL 629
A + +M G R + F K S+ ++ +++ L + G K + +
Sbjct: 421 EALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLV 480
Query: 630 EVKKDPGCSWIELNSRVHAFS-VEDRNNPNCNVIYATLEHLTANLNSVVLFD 680
++ GC L+ + F + +RN+ + N + + H N++ +F+
Sbjct: 481 DMYAKCGC----LDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFE 528
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 14/162 (8%)
Query: 421 HAHLVKTPFES----NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
H H + F+ N++ ++ YS G + AQ F S N WT +M ++
Sbjct: 58 HLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAA 117
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLS--ACVRAGLVNEGMKIFRSMKSYGVVPTL 534
G S+A+ LF ML + ++P+ T VL+ C L +K +G+ +
Sbjct: 118 AGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIK-------FGLDTHV 170
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
++D + G L A +M + DAV + A++ C
Sbjct: 171 FVCNTLLDAYCKHGLLAAARRVFLEMH-DKDAVTYNAMMMGC 211
>gi|357483095|ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513169|gb|AES94792.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 985
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 198/678 (29%), Positives = 340/678 (50%), Gaps = 59/678 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD--ESLSLVSTMHRSN 79
N I+ R G L A +FD+MP RT VS+N +L YS+ ++ + +L + M
Sbjct: 321 NNIISMYSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMG 380
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
++ + T +++L + L+ G +H LK G+ V + LL Y++C ++ A+
Sbjct: 381 LRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAE 440
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VF C+ M ++D V W LI GY K+ D E
Sbjct: 441 SVF--------------------CD-----------MNERDNVAWNSLILGYLKN-DKIE 468
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
K + LF M G P YTF ++ AC+RL + G+++H +I D + AL
Sbjct: 469 KGVYLFIEMMWVGFT-PTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNAL 527
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-----TEAN 314
++ YC A ++ R+E L + NS+I+G E A +F +L + +
Sbjct: 528 VDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPD 587
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPH----RSIISLNTMISVI---PEME------- 360
+Y +I + K L ++ RS+ +T++S+ E E
Sbjct: 588 DYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFC 647
Query: 361 ----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
++ + W MI+GY + A++ + M + S + C+ L L+Q
Sbjct: 648 SIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQ 707
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+++H + K ++ + V SL+DMY++ G++ A FS +S P++ W +++ G+SH
Sbjct: 708 GEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSH 767
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
HG+ +A+ LFE +++Q +VP+ TF+ +LSAC + LV +G ++ M S G+VP +H
Sbjct: 768 HGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSSIGLVPGPKH 827
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMP-IELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
Y+C+V LL R+ L EAEE I P +E + +W LLSAC N++VG RAA+++
Sbjct: 828 YSCMVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLLSACVINKNLKVGVRAAEEVLRF 887
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN 655
+ + ++LSN+YA G+W + +IR+ + L ++K+PG SWIE + +H FS D++
Sbjct: 888 NAEDGPTLILLSNLYAAAGRWDEVAEIRRNMKGLIMEKEPGLSWIEAKNDIHVFSSGDQS 947
Query: 656 NPNCNVIYATLEHLTANL 673
+P + + A L L N+
Sbjct: 948 HPKVDQVQAELHRLKGNM 965
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 129/523 (24%), Positives = 212/523 (40%), Gaps = 59/523 (11%)
Query: 82 LNETTFSTI-----LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+N+ FS I L C SL + +Q+H L+L + GS F Y N +
Sbjct: 272 MNKLCFSVITDTLLLKKCRITTSLQEARQLHALLLTTTNAS----GSKSAFLYNNIISM- 326
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK-SV 195
Y +C + DA VF KMP++ V + L++ Y++ S
Sbjct: 327 -----------------------YSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSRVSE 363
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
C A L+ M G P+ T S+++A + G G ++H +K GF D +
Sbjct: 364 QHCVYAFNLYTQMENMGLR-PSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICV 422
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----- 310
+L+ Y C A V+ + A NSLI G + +IE +F +
Sbjct: 423 QTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGF 482
Query: 311 -----TEANSISYNSMIKGY---------AVYGQVDDSKRLFEKMPHRSIISLNTMIS-- 354
T +S S +K Y + G V L + + +T +
Sbjct: 483 TPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYM 542
Query: 355 VIPEMER-NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLG 412
+ ME+ + V+WNSMISGY +N EKA+ L++ ++ L + T++ + A
Sbjct: 543 IFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFP 602
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
G+ LH ++K F +V+VG++LV MY + A F SI + WT ++
Sbjct: 603 CFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMIT 662
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
GYS G A+ F M + + GVLS C ++ +G I G
Sbjct: 663 GYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDV 722
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ ++D+ ++G+L EA + D W ++L
Sbjct: 723 EMSVSGSLIDMYAKNGNL-EAAYLVFSQVSHPDLKCWNSMLGG 764
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 19/271 (7%)
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
YN++I Y+ G ++D+ ++F+KMP R+ +S N +++ + +
Sbjct: 320 YNNIISMYSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSRVSEQHCVY----------- 368
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
A LY M + + + T + L A S G L G LLHA +K F +++ V T
Sbjct: 369 ----AFNLYTQMENMGLRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQT 424
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SL++MYS C ++ A++ F ++ + AW +L+ GY + + V LF M+ P
Sbjct: 425 SLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTP 484
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
TF +LSAC R G I + V P L +VD+ +G A
Sbjct: 485 TVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIF 544
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERA 588
M + D V W +++S + E GE+A
Sbjct: 545 SRME-KWDLVSWNSMISG---YFENEDGEKA 571
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 207/671 (30%), Positives = 326/671 (48%), Gaps = 61/671 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G+ A +F +MP R V SWN M+ GY K +E+L L M + + + TF
Sbjct: 141 RFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPC 200
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C + L G+++H VL+ G V + L+ YA C ++E A++VFD
Sbjct: 201 VLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFD------ 254
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
M D + W +I+G+ ++ + CE L+LF M
Sbjct: 255 -------------------------GMSLTDCISWNAMIAGHFENHE-CEAGLELFLHML 288
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E E PN T SV A L K +H L +K GF D + +LI+ Y
Sbjct: 289 ED-EVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRM 347
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI-----KG 324
A V+ R+E + ++I+G G D L L E N++S + +
Sbjct: 348 GEACTVFSRMETRDAMSWTAMISGYEKNG-FPDKALEVYALMEVNNVSPDDVTVASALAA 406
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTW 366
A G++D +L E + I + + + EM +++ ++W
Sbjct: 407 CASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISW 466
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHAHLV 425
+SMI+G+ N+ + +AL + M LA + S TF AC+ GSL+ G+ +HAH++
Sbjct: 467 SSMIAGFCFNHKNFEALYYFRHM--LADVKPNSVTFIAALAACAATGSLRCGKEIHAHVL 524
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ S YV +L+D+Y +CG A A F + + +V +W ++ G+ HG G A+
Sbjct: 525 RQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALS 584
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
F MLE P+ TFV +L C RAG+V++G ++F SM + Y +VP L+HY C+VDLL
Sbjct: 585 FFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLL 644
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
R G L E FI MPI DA VWGALL+ C N+E+GE AA+ + L+ +V
Sbjct: 645 SRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHV 704
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+LS++YA G W + +RK + ++ D GCSW+E+ +HAF +D ++P I
Sbjct: 705 LLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEIND 764
Query: 665 TLEHLTANLNS 675
L+ + + +
Sbjct: 765 VLDGIYERMKA 775
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 126/543 (23%), Positives = 223/543 (41%), Gaps = 64/543 (11%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T + G + AR +FD M + +SWN M+ G+ + + + L L M V+
Sbjct: 234 NALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVE 293
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
N T +++ L+ L K+IH L +K G+ + L+ Y++ + EA V
Sbjct: 294 PNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTV 353
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F + + + W+ M+ GY + A +V+ M +V
Sbjct: 354 FSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNV-------------------- 393
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
P++ T S + ACA LG G +H L GF + AL+E
Sbjct: 394 -------------SPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVE 440
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---TEANSISY 318
Y + + A+ V+ + + + + +S+I G + +A F + + NS+++
Sbjct: 441 MYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLADVKPNSVTF 500
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIIS----LNTMISVIPEMERNPVTW-------- 366
+ + A G + K + + + I S N ++ + + + W
Sbjct: 501 IAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGT 560
Query: 367 ------NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QL 419
N M++G+V + + AL + M + TF L CS G + QG +L
Sbjct: 561 KDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWEL 620
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
H+ K N+ +VD+ SR G + + + + +P+ A W AL+NG H
Sbjct: 621 FHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHR 680
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSAC-VRAGLVNEGMKIFRSMKSYGVVPTLEH- 536
L +I+LE + PN A + +LS AG+ E K+ ++M+ G LEH
Sbjct: 681 NIELGELAAKIVLELE--PNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKG----LEHD 734
Query: 537 YTC 539
Y C
Sbjct: 735 YGC 737
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 24/260 (9%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+M+ +G+ + ++F KMP R + S WN M+ GY +
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPERDVFS-----------------WNVMVGGYGKAGF 175
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
E+AL LY M TF + +C + L G+ +HAH+++ V V +
Sbjct: 176 LEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNA 235
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
LV MY++CG + A+ F +S + +W A++ G+ + + LF MLE ++ PN
Sbjct: 236 LVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPN 295
Query: 499 AATFVGVLSACVRAGLVNE---GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
T + S V +GL+++ +I G + ++ + G + EA
Sbjct: 296 LMT---ITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACT 352
Query: 556 FIKDMPIELDAVVWGALLSA 575
M DA+ W A++S
Sbjct: 353 VFSRMETR-DAMSWTAMISG 371
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 9/247 (3%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV N + ++ + A +F MP + V+SW++M+ G+ K E+L M
Sbjct: 432 IVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHM-L 490
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++VK N TF L+ CA SL GK+IH VL+ G +V + LL Y C +
Sbjct: 491 ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGY 550
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGYAK 193
A F + + W++ML G+V A F +M D V + L+ G ++
Sbjct: 551 AWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSR 610
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ + +LF M E +PN + ++ +R+G EG + + + D
Sbjct: 611 A-GMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEG---YNFINRMPITPDA 666
Query: 254 SIGGALI 260
++ GAL+
Sbjct: 667 AVWGALL 673
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 103/267 (38%), Gaps = 12/267 (4%)
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+ LFH C + + G H + +G +++ M R G A F+ +
Sbjct: 96 AYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVFAKM 155
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+V +W ++ GY G EA+ L+ ML P+ TF VL +C + G
Sbjct: 156 PERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGR 215
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
++ + +G+ ++ +V + + G + A + M + D + W A+++ +
Sbjct: 216 EVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSL-TDCISWNAMIAGHFEN 274
Query: 580 MNMEVGERAAQKMFGLDKKP----ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
E G M + +P I++ + S + + +D K + L VK+
Sbjct: 275 HECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS-------DLDFAKEIHALAVKRGF 327
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVI 662
NS + +S R C V
Sbjct: 328 ATDVAFCNSLIQMYSSLGRMGEACTVF 354
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 193/670 (28%), Positives = 347/670 (51%), Gaps = 58/670 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKF-DESLSLVSTMHRSNVKLNETTFS 88
+ G + R +FD+M R VVSWN++L GYS W +F D+ L M + + T S
Sbjct: 149 KTGNVRDGRRVFDEMGDRDVVSWNSLLTGYS-WNRFNDQVWELFCLMQVEGYRPDYYTVS 207
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
T+++ A ++ G QIH LV+K G+E V + L+ + + +A+ VFD
Sbjct: 208 TVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFD----- 262
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRW 207
M KD V W +I+G+ ++G + +A + F
Sbjct: 263 --------------------------NMENKDSVSWNSMIAGHV--INGQDLEAFETFNN 294
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M+ +G P TF SVI++CA L +V+H +K G ++++ AL+ C+
Sbjct: 295 MQLAGAK-PTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCK 353
Query: 268 AFDGAMRVYDRLEN-PCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMI 322
D A ++ + + + ++I+G + G + A +F+ + + N +Y++++
Sbjct: 354 EIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL 413
Query: 323 K-GYAVY---GQVDDSKRLFEKMPHRSIISLNTMISV--------IPEM--ERNPVTWNS 368
+AV+ + K +EK L+ + + + E+ ++ + W++
Sbjct: 414 TVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSA 473
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC-LGSLQQGQLLHAHLVKT 427
M++GY Q E+A +++ + + I TF + +AC+ S++QG+ HA+ +K
Sbjct: 474 MLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKL 533
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ + V +SLV +Y++ G+I A F ++ +W ++++GY+ HG +A+ +F
Sbjct: 534 RLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVF 593
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
E M ++++ +A TF+GV+SAC AGLV +G F M + + PT+EHY+C++DL R
Sbjct: 594 EEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSR 653
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G L +A + I MP A VW +L+A N+E+G+ AA+K+ L+ + +AYV+L
Sbjct: 654 AGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLL 713
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SNIYA G W +K+++RK + VKK+PG SWIE+ ++ ++F D ++P + IY+ L
Sbjct: 714 SNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKL 773
Query: 667 EHLTANLNSV 676
L L V
Sbjct: 774 SELNTRLRDV 783
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 156/570 (27%), Positives = 263/570 (46%), Gaps = 76/570 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A+ LFDQ P+R + N +L YS+ + E+L L +++RS + + T S +LSVCA
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ G+Q+HC +K G VG+ L+ Y + + +RVFDE+ + + + W+ +
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
L GY +++F M + GY P
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQ----------VEGY-----------------------RP 201
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ YT +VI A A GA G +H L++K GFE + + +LI A V+
Sbjct: 202 DYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVF 261
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS----ISYNSMIKGYAVYGQVD 332
D +EN + NS+I G + G+ +A FN + A + ++ S+IK A ++
Sbjct: 262 DNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELG 321
Query: 333 DSKRLFEKMPHRSIISLNT------MISVIPEME--------------RNPVTWNSMISG 372
+ L K +S +S N M+++ E ++ V+W +MISG
Sbjct: 322 LVRVLHCKTL-KSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISG 380
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL---LHAHLVKTPF 429
Y+QN ++A+ L+ MR+ + T+S + ++Q +HA ++KT +
Sbjct: 381 YLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL-------TVQHAVFISEIHAEVIKTNY 433
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
E + VGT+L+D + + G+I+DA F I + +V AW+A++ GY+ G EA +F
Sbjct: 434 EKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQ 493
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLG 545
+ + I PN TF +++AC E K F +Y + L + CV V L
Sbjct: 494 LTREGIKPNEFTFCSIINACTAPTASVEQGKQFH---AYAIKLRLNNALCVSSSLVTLYA 550
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G++ A E K E D V W +++S
Sbjct: 551 KRGNIESAHEIFKRQK-ERDLVSWNSMISG 579
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 216/480 (45%), Gaps = 70/480 (14%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
ET + N I+ ++G L AR +FD M + VSWN+M+ G+ + E+ +
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNN 294
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M + K TF++++ CA L L + +HC LKSG + V + L+ C E
Sbjct: 295 MQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKE 354
Query: 135 IEEAKRVFDELHEDNELL-WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
I++A +F +H ++ W+ M+ GY+Q
Sbjct: 355 IDDAFSLFSLMHGVQSVVSWTAMISGYLQNG----------------------------- 385
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
++A+ LF MR G PN +T+ +++ + F +H +IK +E
Sbjct: 386 ---DTDQAVNLFSLMRREGVK-PNHFTYSTIL--TVQHAVFISE--IHAEVIKTNYEKSS 437
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-- 311
S+G AL++ + A++V++ +E + A ++++ G G E+A IF++LT
Sbjct: 438 SVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTRE 497
Query: 312 --EANSISYNSMIKG-YAVYGQVDDSKRLFE---KMPHRSIISLNTMISVI--------- 356
+ N ++ S+I A V+ K+ K+ + + +++ + +
Sbjct: 498 GIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIES 557
Query: 357 ------PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
+ ER+ V+WNSMISGY Q+ +KAL+++ M+K ++ TF + AC+
Sbjct: 558 AHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAH 617
Query: 411 LGSLQQGQ-----LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
G + +GQ +++ H + E + ++D+YSR G + A + + P A
Sbjct: 618 AGLVGKGQNYFNIMINDHHINPTMEHY----SCMIDLYSRAGMLGKAMDIINGMPFPPAA 673
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 156/349 (44%), Gaps = 74/349 (21%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESL 69
L T + ++ + A+T+C ++ A +LF M +++VVSW M+ GY + D+++
Sbjct: 335 LSTNQNVLTALMVALTKCK---EIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAV 391
Query: 70 SLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY 129
+L S M R VK N T+STIL+V Q I +IH V+K+ YE VG+ LL +
Sbjct: 392 NLFSLMRREGVKPNHFTYSTILTV--QHAVFIS--EIHAEVIKTNYEKSSSVGTALLDAF 447
Query: 130 ANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
I +A +VF+ + + + WS ML GY Q +A +F ++ ++ +
Sbjct: 448 VKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGI-------- 499
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE-GKVVHGLLIKCG 248
PNE+TF S+I AC A E GK H IK
Sbjct: 500 -------------------------KPNEFTFCSIINACTAPTASVEQGKQFHAYAIKL- 533
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
RL N L S+SL+ G IE A IF
Sbjct: 534 -----------------------------RLNN-ALCVSSSLVTLYAKRGNIESAHEIFK 563
Query: 309 RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI-ISLNTMISVI 356
R E + +S+NSMI GYA +GQ + +FE+M R++ + T I VI
Sbjct: 564 RQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVI 612
>gi|297734691|emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 194/666 (29%), Positives = 324/666 (48%), Gaps = 99/666 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I + N I++ GR G + AR LFD+MP VS+ M+ Y K + ++ L TM
Sbjct: 69 IYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTMPD 128
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
TI++ A +IDG YA ++
Sbjct: 129 R----------TIVAESA----MIDG-------------------------YAKAGLMDS 149
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++VFD + + N W+ ++ GY + ++ A +F +MP K+VV WT ++ GYA++
Sbjct: 150 AQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARN--- 206
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
L R MP + T
Sbjct: 207 -----GLIDQARSVFNQMPEKNTISWT--------------------------------- 228
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
A+++ Y D A++++ + L + N++I+G + R+ +A +F+ + N++S
Sbjct: 229 AMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLRNAVS 288
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE--------------MERNP 363
+ M+ G A G ++ F++MP++ I + N MI+ + ERN
Sbjct: 289 WTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERNI 348
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
VTWN+MI GY ++ +A++ + M + I +T +++ +C + L Q HA
Sbjct: 349 VTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSCWGMLELMQA---HAL 405
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
+ E + +L+ MYSR G I+ ++ +F S+ + +V +WTA++ +++HG G A
Sbjct: 406 AIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDHA 465
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVD 542
+ +F ML+ P+ TFVGVLSAC AGLV +G K+F SM ++YG+ P EHY+C+VD
Sbjct: 466 LHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVD 525
Query: 543 LLGRSGHLHEAEEFIKDMP-IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
+LGR+G +HEA + + MP E D V GALL AC N+E+ + QK+ L
Sbjct: 526 ILGRAGQVHEAMDVVWKMPECERDGAVLGALLGACRLHGNVEMADYIGQKLIELQPNSSG 585
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNV 661
YV+L+N++A G W + ++RK++ V+K PG S IE+ + HAF D+++P
Sbjct: 586 GYVLLANVFAARGNWDEFAEVRKKMKDRNVRKVPGFSQIEVKGKCHAFFAGDKSHPQVEE 645
Query: 662 IYATLE 667
IY L
Sbjct: 646 IYELLR 651
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 158/365 (43%), Gaps = 54/365 (14%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T + S I+ R+GQ+ A LFDQMP + VVSW TM+ GY++ D++ S+ +
Sbjct: 159 DTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQ 218
Query: 75 MHRSNV---------------------------KLNETTFSTILSVCAQLNSLIDGKQI- 106
M N + N +++T++S C +DGK++
Sbjct: 219 MPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGC------LDGKRVN 272
Query: 107 ------HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
H + L++ + + SGL N F + A+ FD++ + W+ M+ Y
Sbjct: 273 EAFKLFHLMPLRNAVS-WTIMVSGLA---RNGF-TKLAREYFDQMPNKDIAAWNAMITAY 327
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
V L+ +A ++F M ++++V W +I GYA+ E L +R PNE T
Sbjct: 328 VDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIR--PNETT 385
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
++ +C E H L I G E + S+ ALI Y + ++ L+
Sbjct: 386 MTIILTSC---WGMLELMQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLK 442
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKR 336
+ + +++ G + A +F + T+ + I++ ++ + G V ++
Sbjct: 443 AKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQK 502
Query: 337 LFEKM 341
LF+ M
Sbjct: 503 LFDSM 507
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
++Y + RCG++ A+ F + + ++TA++ Y + +A LF+ M
Sbjct: 68 DIYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTMP 127
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
++ IV +A G +AGL++ K+F +M V +T ++ R G +
Sbjct: 128 DRTIVAESAMIDGY----AKAGLMDSAQKVFDAMIDTNVFS----WTSLISGYFRDGQVA 179
Query: 552 EAEEFIKDMPIELDAVVWGALL 573
+A + MP + + V W ++
Sbjct: 180 KACQLFDQMPAK-NVVSWTTMV 200
>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 208/718 (28%), Positives = 345/718 (48%), Gaps = 95/718 (13%)
Query: 15 ETLIVSTNKAITECGRNGQLVT-ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
E+ ++ N I+ + G + + A F+++ + VVSWN ++ G+S+ +E+ L
Sbjct: 173 ESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFH 232
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLID---GKQIHCLVLKSGYECFEFVGSGLLFFYA 130
M + ++ N T ++IL VCA L GK++HC VL+
Sbjct: 233 AMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRM---------------- 276
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
EL ED ++ SLM Y++ M A +F M +D+V W +I+G
Sbjct: 277 -------------ELVEDVSVINSLMSF-YLRIGQMEKAEFLFRNMKSRDLVSWNAIIAG 322
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK-CGF 249
YA + + KAL+LF P+ T SV+ ACA + K +HG +I+ G
Sbjct: 323 YASNGEWL-KALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGL 381
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG----------- 298
D S+G AL+ FY C A++ + + L + N++++ G
Sbjct: 382 REDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHW 441
Query: 299 ------RIEDAELI-----------FNRLTEANSISY--------------NSMIKGYAV 327
R + ++ ++ E +S S N M+ YA
Sbjct: 442 MLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAK 501
Query: 328 YGQVDDSKRLFEKMPH-RSIISLNTMIS-------------VIPEM-ERNPVTWNSMISG 372
G + + +F + R++++ N+MIS + M E + TWN M+
Sbjct: 502 CGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRV 561
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
Y +N+ ++AL L+ ++ + T + AC+ + S+ + H ++++ F ++
Sbjct: 562 YAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF-ND 620
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V + + +DMYS+CGS+ A F S ++ +TA++ G++ HG+G EA+ +F MLE
Sbjct: 621 VRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLE 680
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
+ P+ VL AC AGLV+EG KIF S+ K +G PT+E Y CVVDLL R G +
Sbjct: 681 LGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIK 740
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
+A F+ MPIE +A +WG LL AC +E+G A +F ++ I YV++SN+YA
Sbjct: 741 DAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYA 800
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+W M+IR+ + E+KK GCSWIE+ R + F D ++P ++IY TL L
Sbjct: 801 ADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQRSIIYRTLSTL 858
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 211/483 (43%), Gaps = 65/483 (13%)
Query: 56 LCGYSKWAKFDESLSLVSTMHRSNV--KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS 113
C +W + DE+LSL R +V K N + +L C ++++ G +H LK
Sbjct: 9 FCASERWLRHDEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKL 68
Query: 114 GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
G+ + + GLL YA ++ ++F E
Sbjct: 69 GHVSCQSLCKGLLNLYAKSGALDYCNKLFGE----------------------------- 99
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
M ++D V+W ++SG A + ++LFR M E PN T V+ CARL
Sbjct: 100 --MDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE 157
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGAMRVYDRLENPCLNASNSLI 291
GK VH +IK G E G ALI Y CG D A ++R+E + + N++I
Sbjct: 158 DA-GKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSD-AYAAFNRIEFKDVVSWNAVI 215
Query: 292 NGLISMGRIEDAELIFNRL----TEANSISYNSMIK---------GYAVYGQVD-DSKRL 337
G E+A +F+ + + N + S++ GY +V R
Sbjct: 216 AGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRR 275
Query: 338 FEKMPHRSII-SLNTMISVIPEME-----------RNPVTWNSMISGYVQNNLHEKALQL 385
E + S+I SL + I +ME R+ V+WN++I+GY N KAL+L
Sbjct: 276 MELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALEL 335
Query: 386 YMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHAHLVKTP-FESNVYVGTSLVDMY 443
+ L + S T + AC+ + +LQ + +H ++++ P + VG +L+ Y
Sbjct: 336 FSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFY 395
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++C A +F IS ++ +W A+++ ++ G + V L ML + I P++ T +
Sbjct: 396 AKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITIL 455
Query: 504 GVL 506
++
Sbjct: 456 TII 458
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 143/299 (47%), Gaps = 32/299 (10%)
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG----YAVYGQVDDSKRLFEKMPHR 344
+L+ +++ I ++ + +S S+ KG YA G +D +LF +M
Sbjct: 44 ALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMD-- 101
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE-KALQLYMTMRKLAIDRTRS-TFS 402
+R+PV WN ++SG HE + ++L+ M + + S T +
Sbjct: 102 ---------------QRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIA 146
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI-NDAQASFSSISS 461
++ C+ L G+ +H++++K+ ES+ G +L+ MY++CG + +DA A+F+ I
Sbjct: 147 IVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEF 205
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+V +W A++ G+S + EA LF ML+ I PN AT +L C N G +
Sbjct: 206 KDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLE-ENAGYRY 264
Query: 522 FRSMKSYGV--VPTLEHYTCVVDLLG---RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + + + + +E + + L+ R G + +AE ++M D V W A+++
Sbjct: 265 GKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMK-SRDLVSWNAIIAG 322
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 159/342 (46%), Gaps = 32/342 (9%)
Query: 199 EKALKLF-RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
++AL LF +R S PN +++++C + A G V+HG +K G +S+
Sbjct: 19 DEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCK 78
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL--IFNRLTEANS 315
L+ Y A D +++ ++ N +++GL + +AE+ +F + N
Sbjct: 79 GLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGF-QSHEAEVMRLFRAMHMVNE 137
Query: 316 ISYNSMI--------------KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI----- 356
NS+ G +V+ V S + ++IS+ ++
Sbjct: 138 AKPNSVTIAIVLPVCARLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAY 197
Query: 357 ---PEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL- 411
+E ++ V+WN++I+G+ +N E+A +L+ M K I +T + + C+ L
Sbjct: 198 AAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLE 257
Query: 412 --GSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ G+ +H H++ + +V V SL+ Y R G + A+ F ++ S ++ +W
Sbjct: 258 ENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWN 317
Query: 469 ALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSAC 509
A++ GY+ +G +A+ LF E + + I P++ T V VL AC
Sbjct: 318 AIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPAC 359
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 137/331 (41%), Gaps = 67/331 (20%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
YA ++++ +V+ N I+ + A +F+ M + +WN M+ Y++
Sbjct: 507 YAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAEND 566
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS 123
D++LSL + +K + T +IL CA + S+ +Q H V+++
Sbjct: 567 FPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRA---------- 616
Query: 124 GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
CF F ++ Y +C + A+ +F+ P+KD+V+
Sbjct: 617 --------CFNDVRLNGAFIDM--------------YSKCGSVFGAYKLFLSSPQKDLVM 654
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHG 242
+T ++ G+A G E+AL++F +M E G P+ +V+ AC+ G EG K+ +
Sbjct: 655 FTAMVGGFAMHGMG-EEALRIFSYMLELGVK-PDHVIITAVLFACSHAGLVDEGWKIFNS 712
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
+ GF+ P + +++ L GRI+D
Sbjct: 713 IEKVHGFQ-------------------------------PTMEQYACVVDLLARGGRIKD 741
Query: 303 AELIFNRLT-EANSISYNSMIKGYAVYGQVD 332
A R+ EAN+ + +++ + +V+
Sbjct: 742 AYTFVTRMPIEANANIWGTLLGACRTHHEVE 772
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 295/552 (53%), Gaps = 58/552 (10%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A VF + + ++++W + G+A S D AL L+ M G +PN YTF ++++C
Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVS-ALYLYVCMISLGL-LPNCYTFPFLLKSC 98
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A+ AF EG+ +HG ++K G++ D + +LI Y + A +V+D+ + + +
Sbjct: 99 AKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYT 158
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI-I 347
+LI G S G I A+ +F+ + + +S+N+MI GYA G ++ LF++M ++
Sbjct: 159 ALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRP 218
Query: 348 SLNTMISVIP-----------------------------------------EME------ 360
+TM+SV+ E+E
Sbjct: 219 DESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLF 278
Query: 361 -----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ ++WN++I GY NL+++AL L+ M + T + AC+ LG+++
Sbjct: 279 EGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIE 338
Query: 416 QGQLLHAHLVK--TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
G+ +H ++ K + TSL+DMY++CG I AQ F SI + ++++W A++ G
Sbjct: 339 IGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFG 398
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVP 532
++ HG + A +F M + +I P+ TFVG+LSAC +G+++ G IFRSMK Y + P
Sbjct: 399 FAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITP 458
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
LEHY C++DLLG SG EAEE I M +E D V+W +LL AC N+E+GE AQ +
Sbjct: 459 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNL 518
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
++ K +YV+LSNIYA G+W + IR L +KK PGCS IE++S VH F +
Sbjct: 519 IKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 578
Query: 653 DRNNPNCNVIYA 664
D+ +P IY
Sbjct: 579 DKFHPRNREIYG 590
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 144/531 (27%), Positives = 249/531 (46%), Gaps = 54/531 (10%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A ++F+ + ++ WNTM G++ + +L L M + N TF +L
Sbjct: 38 LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKS 97
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
CA+ + +G+QIH VLK GY+ +V + L+ Y +E+A++VFD+ + + +
Sbjct: 98 CAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSY 157
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++ GY ++ A +F ++P KDVV W +ISGYA++ + E AL+LF+ M ++
Sbjct: 158 TALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKE-ALELFKEMMKTNV 216
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+E T SV+ ACA+ + G+ VH + GF + I ALI+ Y C + A
Sbjct: 217 R-PDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 275
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYG 329
+++ L + + N+LI G M ++A L+F + + N ++ S++ A G
Sbjct: 276 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG 335
Query: 330 QVD--------DSKRL---FEKMPHRSIISLNTMISVIPEME-----------RNPVTWN 367
++ +KRL HR+ SL M + ++E R+ +WN
Sbjct: 336 AIEIGRWIHVYINKRLKGVANASSHRT--SLIDMYAKCGDIEAAQQVFDSILNRSLSSWN 393
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+MI G+ + A ++ MRK I+ TF L ACS G L G+ H+ ++
Sbjct: 394 AMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGR----HIFRS 449
Query: 428 PFESNVYVGT-----SLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG--- 478
E ++D+ G +A+ +++ P+ W +L+ HG
Sbjct: 450 MKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVE 509
Query: 479 LG-SEAVLLFEI--------MLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
LG S A L +I +L +I A + V A +RA L ++GMK
Sbjct: 510 LGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEV--AKIRALLNDKGMK 558
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 207/441 (46%), Gaps = 57/441 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS IT G + +A+ +FD++PI+ VVSWN M+ GY++ E+L L M +
Sbjct: 154 VVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK 213
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+NV+ +E+T +++S CAQ S+ G+Q+H + G+ + + L+ Y C E+E
Sbjct: 214 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 273
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F+ L + + W+ ++ GY NL
Sbjct: 274 ACGLFEGLSYKDVISWNTLIGGYTHMNLY------------------------------- 302
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK--CGFEFDESI 255
++AL LF+ M SGE+ PN+ T S++ ACA LGA G+ +H + K G S
Sbjct: 303 -KEALLLFQEMLRSGES-PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSH 360
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----T 311
+LI+ Y C + A +V+D + N L++ N++I G GR A IF+R+
Sbjct: 361 RTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEI 420
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
E + I++ ++ + G +D + +F M I+ P++E + MI
Sbjct: 421 EPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKIT--------PKLEH----YGCMID 468
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFE 430
+ L ++A ++ TM ++ + L AC G+++ G+ +L+K P
Sbjct: 469 LLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKN 525
Query: 431 SNVYVGTSLVDMYSRCGSIND 451
YV L ++Y+ G N+
Sbjct: 526 PGSYV--LLSNIYATAGRWNE 544
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 120/267 (44%), Gaps = 24/267 (8%)
Query: 418 QLLHAHLVKTPFESNVYVGTSLVD---MYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+++HA ++KT + Y + L++ + + A + F +I PN+ W + G+
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
+ A+ L+ M+ ++PN TF +L +C ++ EG +I + G L
Sbjct: 64 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
+T ++ + ++G L +A + + D D V + AL++ + + +AQKMF
Sbjct: 124 YVHTSLISMYVQNGRLEDARK-VFDQSSHRDVVSYTALITG--YASKGYIA--SAQKMF- 177
Query: 595 LDKKPISAYVILSNI---YAVLGKWGKKMDIRKRLTHLEVKKD--------PGCSW---I 640
D+ PI V + + YA G + +++ K + V+ D C+ I
Sbjct: 178 -DEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASI 236
Query: 641 ELNSRVHAFSVEDRNNPNCNVIYATLE 667
EL +VH++ + N ++ A ++
Sbjct: 237 ELGRQVHSWIDDHGFGSNLKIVNALID 263
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 186/561 (33%), Positives = 292/561 (52%), Gaps = 58/561 (10%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A VF + + + + W +I G+A S D AL L+ +M G + PN YTF + ++C
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPIS-ALNLYVYMISLGLS-PNSYTFPFLFKSC 88
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A+ A EGK +H ++K G D + +LI Y + A +V+D + + +
Sbjct: 89 AKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYT 148
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM------P 342
++I G S G ++ A+ +F+ + + +S+N+MI GYA G+ ++ LF +M P
Sbjct: 149 AMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKP 208
Query: 343 HRSIIS---------------------------------LNTMISVIP---EMER----- 361
S ++ +N +I + EMER
Sbjct: 209 DESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLF 268
Query: 362 ------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
+ ++WN++I GY N H++AL ++ M KL T + AC+ LG++
Sbjct: 269 EGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAID 328
Query: 416 QGQLLHAHLVKT--PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
G+ +H ++ K +N + TSL+DMY++CG+I A F +I + ++++ A++ G
Sbjct: 329 IGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFG 388
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVP 532
++ HG A L M + I P+ TFVG+LSAC AGL + G KIF+SM Y + P
Sbjct: 389 FAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEP 448
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
LEHY C++DLLGRSG EAEE I M +E D V+WG+LL AC N+E+GE AQK+
Sbjct: 449 KLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKL 508
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
++ K +YV+LSNIYA +W +R L +KK PGCS IE++S VH F +
Sbjct: 509 MKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIG 568
Query: 653 DRNNPNCNVIYATLEHLTANL 673
D+ +P IY LE + + L
Sbjct: 569 DKFHPQNKEIYKMLEEIDSLL 589
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 215/449 (47%), Gaps = 63/449 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS IT G + A+ +FD++PI+ VVSWN M+ GY++ ++ E+L L + M +
Sbjct: 144 VVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMK 203
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+VK +E+T +T+LS C ++ G+QIH + G+ + + L+ Y+ C E+E
Sbjct: 204 MDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMER 263
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F+ L + + W+ ++ GY N +A VF +M
Sbjct: 264 AHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEM--------------------- 302
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK--CGFEFDESI 255
LKL GE PN+ T S++ ACA LGA G+ +H + K G + S+
Sbjct: 303 ----LKL-------GET-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSL 350
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT---- 311
+LI+ Y C + A +V+D + N L++ N++I G GR + A + +R+
Sbjct: 351 QTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGI 410
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
E + I++ ++ + G D +++F+ M +L+ I P++E + MI
Sbjct: 411 EPDDITFVGLLSACSHAGLSDLGRKIFKSM------TLDYRIE--PKLEH----YGCMID 458
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE- 430
++ L ++A +L +M ++ + L AC +L+ G+L+ L+K +
Sbjct: 459 LLGRSGLFKEAEELINSM---TMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKN 515
Query: 431 -------SNVYVGTSLVDMYSRCGS-IND 451
SN+Y ++ D +R + +ND
Sbjct: 516 PGSYVLLSNIYATSARWDDVARVRTLLND 544
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 215/470 (45%), Gaps = 28/470 (5%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A ++F + +SWNTM+ G++ + +L+L M + N TF +
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
CA+ + +GKQIH +LK G V + L+ YA +E+A +VFD + + +
Sbjct: 88 CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ M+ GY M A +F ++P KDVV W +ISGYA+ + ++AL+LF M + +
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAE-IGRYKEALELFNEMMKM-D 205
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+E T +V+ C G G+ +H + GF + + ALI+ Y C + A
Sbjct: 206 VKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAH 265
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYG 329
+++ L+ + + N+LI G + ++A L+F + + N ++ S++ A G
Sbjct: 266 GLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLG 325
Query: 330 QVDDSK--RLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNSM 369
+D + ++ + II+ ++ + + +M ++ + N+M
Sbjct: 326 AIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAM 385
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTP 428
I G+ + + A L M+K I+ TF L ACS G G ++ + +
Sbjct: 386 IFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYR 445
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
E + ++D+ R G +A+ +S++ P+ W +L+ H
Sbjct: 446 IEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIH 495
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 138/347 (39%), Gaps = 48/347 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I + G++ A LF+ + + V+SWNT++ GY+ E+L + M +
Sbjct: 249 NALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGET 308
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLK--SGYECFEFVGSGLLFFYANCFEIEEAK 139
N+ T +IL CA L ++ G+ IH + K G + + L+ YA C IE A
Sbjct: 309 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAAN 368
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+VFD + + + M+ G+ AFD+ +M K DG E
Sbjct: 369 QVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKK-----------------DGIE 411
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIGGA 258
P++ TF ++ AC+ G G K+ + + E G
Sbjct: 412 ----------------PDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGC 455
Query: 259 LIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRLTE---AN 314
+I+ F A + + + P SL+ +E ELI +L + N
Sbjct: 456 MIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKN 515
Query: 315 SISYNSMIKGYAVYGQVDDSKRL--------FEKMPHRSIISLNTMI 353
SY + YA + DD R+ +K+P S I +++M+
Sbjct: 516 PGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMV 562
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 198/711 (27%), Positives = 340/711 (47%), Gaps = 121/711 (17%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
+S N I+ + G+L AR LFD M RT VSW ++ GY + + E+ L + M R
Sbjct: 75 ISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRG 134
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
++ + T T+LS +L + QIH V+K GYE
Sbjct: 135 GIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY--------------------- 173
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
N ++ + ++ Y + + + A +F M KD V + L++GY S +G
Sbjct: 174 ----------NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGY--SNEGL 221
Query: 199 -EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E+A++LF + SG P+++TF +++ A L G+ VHG ++K F ++ +G
Sbjct: 222 NEEAIELFLELHNSGIK-PSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGN 280
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL+++Y + ++++ +F + E + IS
Sbjct: 281 ALLDYYSKHD-------------------------------QVDEVGKLFXEMPELDGIS 309
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKM----------PHRSIISLNT--------------MI 353
YN +I YA GQ +S LF K+ P +++S+ T I
Sbjct: 310 YNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAI 369
Query: 354 SVIPEME-----------------------------RNPVTWNSMISGYVQNNLHEKALQ 384
+V E ++ V W +MIS YVQ HE+ +
Sbjct: 370 TVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGIN 429
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
++ MR+ + ++TF+ + AC+ L S+ G+ LH+ L+++ F SNVY G++L+D Y+
Sbjct: 430 VFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYA 489
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+CG + DA SF + N +W AL++ Y+ +G + F+ M++ P++ +F+
Sbjct: 490 KCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLS 549
Query: 505 VLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
VLSAC G V E + F SM Y V P EHYT +VD+L R+G EAE+ + +MP E
Sbjct: 550 VLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFE 609
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGL-DKKPISAYVILSNIYAVLGKWGKKMDI 622
++W ++L++C N E+ ++AA ++F + D + + Y+ +SNIYAV G+W +
Sbjct: 610 PSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKV 669
Query: 623 RKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+K + V+K P SW+E+ + H FS D+++P I + L+ +
Sbjct: 670 KKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEM 720
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 140/298 (46%), Gaps = 24/298 (8%)
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
NP SN +N + G + A +F+++ N+IS N MI G+ +G++ ++ LF+
Sbjct: 40 NPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDG 99
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
M +ER V+W +I GY+Q+N ++A +LY MR+ I+ T
Sbjct: 100 M-----------------VERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVT 142
Query: 401 FSVLFHACSCLGSLQQGQL---LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
L S G L+ + +H H++K +E N+ V SLVD Y + + A F
Sbjct: 143 LVTLL---SGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
+ + + + +LM GYS+ GL EA+ LF + I P+ TF +LSA V
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G ++ + V + ++D + + E + +MP ELD + + ++++
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMP-ELDGISYNVVITS 316
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
VL ++ + SL L+ AH+VKT F N V+ + G + A F + +
Sbjct: 13 VLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAK 72
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
N + +++G+ G S+A LF+ M+E+ A ++ ++ +++ E +++
Sbjct: 73 NTISLNMMISGHLKFGKLSKARELFDGMVER----TAVSWTILIGGYLQSNQSKEAFRLY 128
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
M+ G+ P Y +V LL G L
Sbjct: 129 ADMRRGGIEPD---YVTLVTLLSGFGEL 153
>gi|242094978|ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
gi|241916202|gb|EER89346.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
Length = 657
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 281/537 (52%), Gaps = 70/537 (13%)
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
+ +H L + +GY FV S L Y ++++A++VFD
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFD------------------- 173
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
+P D ++W L++G SV AL+ F M E G P+ T
Sbjct: 174 ------------AVPSPDTILWNTLLAGLPGSV-----ALEAFVRMVEVGRVRPDSTTLA 216
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
S +RA A G+ VHG +KCG E + L+ Y C D A ++DR+E+P
Sbjct: 217 SSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDCARSLFDRMEDP 276
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLF 338
L A N+LI+G G +E + +F L + NS + ++I Y+ +G L
Sbjct: 277 DLVAYNALISGYSVNGMVESSVELFKELAASDWRPNSSTLVAVIPVYSPFGH-----ELL 331
Query: 339 EKMPHRSII------------SLNTMISVIPEME-----------RNPVTWNSMISGYVQ 375
+ H ++ +L T+ + +ME + +WN+MISGY Q
Sbjct: 332 ARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMPEKTMESWNAMISGYAQ 391
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N L E A++L+ M++L + +T S AC+ LG+L G +H + K E NVYV
Sbjct: 392 NGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQLGALSLGTWVHRIIAKENLELNVYV 451
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
T+L+DMY++CGSI +A++ F + + NV +W A+++GY HG G+EA+ L++ ML+ I
Sbjct: 452 MTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGRGAEALKLYKSMLDACI 511
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAE 554
+P ++TF+ VL AC GLV+EG K+FR M + Y + P +EH TC+VDLLGR+G L+EA
Sbjct: 512 LPTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYRISPGIEHCTCMVDLLGRAGKLNEAL 571
Query: 555 EFIKDMPIE-LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
+ I + P + VWGALLSAC N ++ + A+QK+F LD + YV+LSN+Y
Sbjct: 572 DLISEFPQSAIGPGVWGALLSACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLY 628
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 209/504 (41%), Gaps = 103/504 (20%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR +FD +P + WNT+L G + + +V V+ + TT ++ L A+
Sbjct: 168 ARKVFDAVPSPDTILWNTLLAGLPGSVALEAFVRMVEV---GRVRPDSTTLASSLRAAAE 224
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ + G+ +H +K G E V +GL+ Y+ C +++ A+ +FD
Sbjct: 225 ASHVAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDCARSLFD------------- 271
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENM 215
+M D+V + LISGY SV+G E +++LF+ + S +
Sbjct: 272 ------------------RMEDPDLVAYNALISGY--SVNGMVESSVELFKELAAS-DWR 310
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN T +VI + G + +H ++K + D + AL YC + A +
Sbjct: 311 PNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSI 370
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN------SIS------------ 317
+D + + + N++I+G G E A +F + E N +IS
Sbjct: 371 FDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQLGAL 430
Query: 318 ---------------------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
++I YA G + +++ +F++M +++++S
Sbjct: 431 SLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVS-------- 482
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
WN+MISGY + +AL+LY +M I T STF + +ACS G + +
Sbjct: 483 ---------WNAMISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDE 533
Query: 417 GQLLHAHLVKTPFESNVYVG----TSLVDMYSRCGSINDAQASFSSI--SSPNVAAWTAL 470
GQ + + E + G T +VD+ R G +N+A S S+ W AL
Sbjct: 534 GQKVFRVMTN---EYRISPGIEHCTCMVDLLGRAGKLNEALDLISEFPQSAIGPGVWGAL 590
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQD 494
++ H A L + + E D
Sbjct: 591 LSACMVHKNSDLAKLASQKLFELD 614
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 161/366 (43%), Gaps = 58/366 (15%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR+LFD+M +V++N ++ GYS + S+ L + S+ + N +T ++
Sbjct: 261 GDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAASDWRPNSSTLVAVI 320
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
V + + + +H V+K+ + V + L Y ++E A+ +FD + E
Sbjct: 321 PVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMPEKTME 380
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY Q L E A++LF+ M+E
Sbjct: 381 SWNAMISGYAQNGL--------------------------------TEMAVELFQLMQEL 408
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
PN T S + ACA+LGA G VH ++ K E + + ALI+ Y C +
Sbjct: 409 NVQ-PNPTTISSTLSACAQLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAE 467
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAV 327
A ++DR++N + + N++I+G GR +A ++ + +A S ++ S++ +
Sbjct: 468 ARSIFDRMDNKNVVSWNAMISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSH 527
Query: 328 YGQVDDSKRLFEKMPHRSIIS------------------LN---TMISVIPEMERNPVTW 366
G VD+ +++F M + IS LN +IS P+ P W
Sbjct: 528 GGLVDEGQKVFRVMTNEYRISPGIEHCTCMVDLLGRAGKLNEALDLISEFPQSAIGPGVW 587
Query: 367 NSMISG 372
+++S
Sbjct: 588 GALLSA 593
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 107/223 (47%), Gaps = 34/223 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VST C R + +AR++FD MP +T+ SWN M+ GY++ + ++ L M
Sbjct: 349 LVSTALTTLYC-RLNDMESARSIFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQE 407
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
NV+ N TT S+ LS CAQL +L G +H ++ K E +V + L+ YA C I E
Sbjct: 408 LNVQPNPTTISSTLSACAQLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAE 467
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ +FD + N + W+ M ISGY G
Sbjct: 468 ARSIFDRMDNKNVVSWNAM-------------------------------ISGYGLHGRG 496
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
E ALKL++ M ++ +P TF SV+ AC+ G EG+ V
Sbjct: 497 AE-ALKLYKSMLDAC-ILPTSSTFLSVLYACSHGGLVDEGQKV 537
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 261/490 (53%), Gaps = 23/490 (4%)
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI-GGALIEFYCGCEA 268
+ G +P+ + +++ C RLG +G++VH L+ F + + ++ Y C
Sbjct: 79 QRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGC 138
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKG 324
D A R++D + + +LI G R DA L+F ++ + N + +S++K
Sbjct: 139 LDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKA 198
Query: 325 YAVYGQVDDSKRLFE---KMPHRSII----SLNTMISVIPEME-----------RNPVTW 366
+D +L K ++S + +L M + M+ ++ V+W
Sbjct: 199 SGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSW 258
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N++ISG+ + E AL L M++ T T+S +F AC+ +G+L+QG+ +HAH++K
Sbjct: 259 NALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIK 318
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ + ++G +L+DMY++ GSI+DA+ F + P+V +W ++ G + HGLG E +
Sbjct: 319 SGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDR 378
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
FE ML I PN +F+ VL+AC +GL++EG+ F MK Y V P + HY VDLLGR
Sbjct: 379 FEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGR 438
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
G L AE FI++MPIE A VWGALL AC NME+G AA++ F LD ++L
Sbjct: 439 VGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLL 498
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SNIYA G+W +RK + VKK P CSW+E+ + VH F D +P I
Sbjct: 499 SNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKW 558
Query: 667 EHLTANLNSV 676
E ++ + +
Sbjct: 559 EEISGKIKEI 568
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 153/328 (46%), Gaps = 37/328 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N + + G L AR +FD+MP + +V+W ++ G+S+ + ++L L M R
Sbjct: 123 LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ N T S++L + L G Q+H LK GY+ +VGS L+ YA C ++
Sbjct: 183 LGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDA 242
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ FD MP K V W LISG+A+ +G
Sbjct: 243 AQLAFD-------------------------------GMPTKSEVSWNALISGHARKGEG 271
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E AL L W + P +T+ SV ACA +GA +GK VH +IK G + IG
Sbjct: 272 -EHALHLL-WKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGN 329
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEA 313
L++ Y + D A RV+DRL P + + N+++ G G ++ F ++ E
Sbjct: 330 TLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEP 389
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKM 341
N IS+ ++ + G +D+ FE M
Sbjct: 390 NEISFLCVLTACSHSGLLDEGLYYFELM 417
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 133/317 (41%), Gaps = 59/317 (18%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
R G + A+ FD MP ++ VSWN ++ G+++ + + +L L+ M R N + T+S
Sbjct: 235 ARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYS 294
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++ S CA + +L GK +H ++KSG + F+G+ LL YA I++AKRVFD L +
Sbjct: 295 SVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKP 354
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ ML G Q L + D F +M + +
Sbjct: 355 DVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGI--------------------------- 387
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
PNE +F V+ AC+ G EG L+ K E D + Y
Sbjct: 388 ------EPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPD-------VPHYVTFVD 434
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
G + + DR E I IE ++ L A + N + YA
Sbjct: 435 LLGRVGLLDRAER------------FIREMPIEPTAAVWGALLGACRMHKNMELGVYA-- 480
Query: 329 GQVDDSKRLFEKMPHRS 345
++R FE PH S
Sbjct: 481 -----AERAFELDPHDS 492
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 327/660 (49%), Gaps = 72/660 (10%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+ K ++ G G+L AR +FD +P +SW ++ Y ++F + + + M
Sbjct: 40 STKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLK 99
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ + FS +L C++ + +G+++HC ++K G FV +GL+ YA C EIE ++
Sbjct: 100 ECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNP-DSFVFTGLVDMYAKCGEIECSRS 158
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VFDE NL ++V W+ +I+GY ++ + +
Sbjct: 159 VFDE-------------------NL------------DRNVFSWSSMIAGYVQN-NLAQD 186
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
L LF MRE N+ T ++ AC +LGA +GK +HG LIKCG E + AL+
Sbjct: 187 GLVLFNRMREELIE-ANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALL 245
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----------NRL 310
+ Y C A V+D L + + ++I G G E+A +F N +
Sbjct: 246 DLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDV 305
Query: 311 TEANSISYNSMIK----GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME------ 360
T A+ S S + G +++G L K+ R I N+++ + +
Sbjct: 306 TIASVFSSCSQLLNLNLGRSIHG-------LSIKLGSRDPIVTNSLVDFYAKCQMNRDAR 358
Query: 361 --------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
R+ V WNS+IS + QN +AL+L+ MR ++ T + AC+ L
Sbjct: 359 YVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLN 418
Query: 413 SLQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
+LQ G HA+ VK SNVYVGT+L+ Y++CG A+ F + + W+A++
Sbjct: 419 ALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMI 478
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGV 530
+GY G G ++ +F ML+ ++ PN F +LSAC G++ EG ++F + + Y +
Sbjct: 479 SGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNL 538
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
VP+ +HYTC+VDLL R+G L EA +FI+ MP++ D ++GA L C ++GE A +
Sbjct: 539 VPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIK 598
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
+M L YV++ N+YA +W K +R+ + + K PGCS +E++ H FS
Sbjct: 599 RMLELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCSLMEMDVD-HDFS 657
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 175/358 (48%), Gaps = 25/358 (6%)
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
+H L+ G D S L+ Y D A V+D + +P + +I
Sbjct: 24 MHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSE 83
Query: 300 IEDAELIFNR----LTEANSISYNSMIKGYAVYGQVDDSKRLFEKM-----PHRSIIS-L 349
D +NR L E +++ ++ ++K + D+ +++ ++ P + + L
Sbjct: 84 FRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNPDSFVFTGL 143
Query: 350 NTMISVIPEME-----------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
M + E+E RN +W+SMI+GYVQNNL + L L+ MR+ I+ +
Sbjct: 144 VDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQ 203
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
T +L HAC LG+L QG+ LH +L+K E Y+ T+L+D+Y++CG + DA++ F
Sbjct: 204 ITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDE 263
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ ++ +WTA++ GY+ +G EA+ LF + ++PN T V S+C + +N G
Sbjct: 264 LHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLG 323
Query: 519 MKIFR-SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
I S+K P + + +VD + ++ ++ + + D V W +++SA
Sbjct: 324 RSIHGLSIKLGSRDPIVTN--SLVDFYAKC-QMNRDARYVFETISDRDVVAWNSIISA 378
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 190/620 (30%), Positives = 311/620 (50%), Gaps = 55/620 (8%)
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S KL E S L C LN + KQ+H +LKS FV L+ ++ C ++
Sbjct: 15 STRKLLEQKLSD-LHKCTNLNQV---KQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLL 70
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A F+++ N L++ M+ + + S AF F M + DG
Sbjct: 71 ATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQR-----------------DG 113
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+ + +TF +++ C + VH + K GF D +
Sbjct: 114 ----------------HYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDVFVPN 157
Query: 258 ALIEFY--CGCEAFDGAMRVYDRL-ENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+LI+ Y CG A +++ + + + NS+I+GL G E+A +F+ + E +
Sbjct: 158 SLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMPEKD 217
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI---SVIPEME----------- 360
IS+N+M+ GY G++DD+ +LF++MP R+++S +TM+ +ME
Sbjct: 218 GISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDKMPV 277
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
+N V+W ++SG+ + L +A+ L+ M K + T + AC+ G L G+ +
Sbjct: 278 KNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKI 337
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA + F+ + +LVDMY++CG +N A F+ I + +V +W A++ G + HG G
Sbjct: 338 HASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHG 397
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTC 539
+A+ LF+ M E+ PN T +GVL AC AGL+++G++ F +M + Y +VP +EHY C
Sbjct: 398 VKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGC 457
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
+VDLLGR G L EA I++MP+ +A++WG LL AC +E+ + L+
Sbjct: 458 MVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDHLVELEPTD 517
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNC 659
+ +LSNIYA G W + R R+ + KK G S IE+N+ VH F+V DR++P
Sbjct: 518 SGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSIEVNNEVHEFTVFDRSHPKS 577
Query: 660 NVIYATLEHLTANLNSVVLF 679
+ IY + L L V F
Sbjct: 578 DNIYQVINGLRHELKQVECF 597
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 192/431 (44%), Gaps = 65/431 (15%)
Query: 26 TECGRNGQLVTARNLFDQMPIR-TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
++CG G + A+ LF M R VVSWN+M+ G +K ++E+ + M +
Sbjct: 164 SKCGSCG-ISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMPEKD----- 217
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
N+++DG Y ++++A ++FDE
Sbjct: 218 ---------GISWNTMLDG-------------------------YVKVGKMDDAFKLFDE 243
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ E N + WS M++GY + M A +F KMP K++V WT ++SG+A+ +A+ L
Sbjct: 244 MPERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEK-GLAREAISL 302
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F M ++ + N T S++ ACA G G+ +H + F+ I AL++ Y
Sbjct: 303 FDQMEKACLKLDNG-TVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYA 361
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNS 320
C + A V++ ++N + + N+++ GL G A +F R+ E N ++
Sbjct: 362 KCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIG 421
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
++ G +DD R F M +++PE+E + M+ + E
Sbjct: 422 VLCACTHAGLIDDGIRYFSTMERD--------YTLVPEVEH----YGCMVDLLGRKGRLE 469
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSL 439
+A++L +R + + + L AC +++ + + HLV+ P +S + + L
Sbjct: 470 EAIRL---IRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDHLVELEPTDSGNF--SML 524
Query: 440 VDMYSRCGSIN 450
++Y+ G N
Sbjct: 525 SNIYAAAGDWN 535
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 196/465 (42%), Gaps = 54/465 (11%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
Q++ A N F+Q+ V +NTM+ +S ++ ++ + M R + TF +L
Sbjct: 67 QMLLATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLK 126
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE--IEEAKRVFDELHEDNE 150
VC L + +H + K G+ FV + L+ Y+ C I AK++F + +
Sbjct: 127 VCTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRD 186
Query: 151 LL-WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
++ W+ M+ G + L +A VF +MP+KD + W ++ GY K V + A KLF M
Sbjct: 187 VVSWNSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVK-VGKMDDAFKLFDEMP 245
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E N ++ +++ + G +++ FD+ L+ + F
Sbjct: 246 ER-----NVVSWSTMVLGYCKAGDMEMARML----------FDKMPVKNLVSWTIIVSGF 290
Query: 270 ------DGAMRVYDRLENPCLNASNSLI---------NGLISMGRIEDAELIFNRLTEAN 314
A+ ++D++E CL N + +GL+ +G A + N
Sbjct: 291 AEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTT 350
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
IS N+++ YA G+++ + +F + ++ ++S WN+M+ G
Sbjct: 351 EIS-NALVDMYAKCGRLNIAYDVFNDIKNKDVVS-----------------WNAMLQGLA 392
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNV 433
+ KAL+L+ M++ + T + AC+ G + G + + + V
Sbjct: 393 MHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEV 452
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
+VD+ R G + +A ++ +PN W L+ H
Sbjct: 453 EHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMH 497
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 33/223 (14%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS + + + G + AR LFD+MP++ +VSW ++ G+++ E++SL
Sbjct: 246 ERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQ 305
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++ +KL+ T +IL+ CA+ L G++IH + + ++C + + L+ YA C
Sbjct: 306 MEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGR 365
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+ A VF+++ + + W+ ML G + G+
Sbjct: 366 LNIAYDVFNDIKNKDVVSWNAMLQGLA--------------------------MHGHGV- 398
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
KAL+LF+ M+E G + PN+ T V+ AC G +G
Sbjct: 399 -----KALELFKRMKEEGFS-PNKVTMIGVLCACTHAGLIDDG 435
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 195/576 (33%), Positives = 305/576 (52%), Gaps = 60/576 (10%)
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKD-VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
LV + + MS F K K+D +W +I ++ D E A +F M E+G +
Sbjct: 64 LVEFARYLFMSRHFGR--KHRKQDNPFLWNAIIKSFSHGEDPRE-AFVIFNLMLENGVCV 120
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
++++F V++AC+RLG EG +HGLL + D + L+ Y C A ++
Sbjct: 121 -DKFSFSLVLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQL 179
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFN--RLTEANSISYNSMIKGYAVY----- 328
+DR+ + NS+I+G + G ++ A +F+ + + N IS+NSMI GYA
Sbjct: 180 FDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLR 239
Query: 329 ---------------------------GQVDDSKRLFEKMPHRSIISLNTMIS------- 354
G+++++ LF +MP R ++S M+
Sbjct: 240 VAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGE 299
Query: 355 ------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTM---RKLAIDRTRSTFSVL 404
+ EM ER+ ++ N+M++GYVQN +AL + M ++L D +T +
Sbjct: 300 IDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDN--ATLLIT 357
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
A + LG +G LH ++ F + +G +L+DMY++CGSI++A + F I ++
Sbjct: 358 LSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSI 417
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
W A++ G + HGLG A LF M + + P+ TF+GVL+AC AGLV EG+ F
Sbjct: 418 DHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFEL 477
Query: 525 MKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
M+ + V P L+HY C+VD+LGR+GH+ EA++F++ MPIE + VVW LLSAC N
Sbjct: 478 MRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSACRNHENFT 537
Query: 584 VGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELN 643
+GE A+ + +D S+YV+LSNIYA G W IR + ++KK PGCS IEL
Sbjct: 538 IGEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKIPGCSQIELE 597
Query: 644 SRVHAFSVEDRNNPNCNVIYATLEHLTANLNSVVLF 679
VH F V D+++P IY+ L+ L+A LNS V +
Sbjct: 598 GNVHEFFVRDKSHPQVREIYSMLDSLSA-LNSEVAY 632
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 209/486 (43%), Gaps = 102/486 (20%)
Query: 52 WNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL 111
WN ++ +S E+ + + M + V +++ +FS +L C++L + +G QIH L+
Sbjct: 90 WNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLG 149
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
+ F+ + L+ Y C + A+++FD + + + + ++ M+ GYV+ ++ A +
Sbjct: 150 RMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARE 209
Query: 172 VFIKMP--KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE--YTFDSVIRA 227
+F MP +K+++ W +ISGYA+S +G A +LF E MP +++S+I
Sbjct: 210 LFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELF-------EEMPKRDLISWNSMIDG 262
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
C +KCG + A +++++ + +
Sbjct: 263 C----------------VKCG-------------------KMENAHHLFNQMPKRDVVSW 287
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS-- 345
++++G +G I+ A +F+ + E + IS N+M+ GY G + ++ F M R
Sbjct: 288 ANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKEL 347
Query: 346 -------IISLNTM--------------------------------------------IS 354
+I+L+ + +S
Sbjct: 348 FPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALS 407
Query: 355 VIPEMERNPVT-WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
V +++ + WN++I G + L E A +L+M M KL + TF + +AC+ G
Sbjct: 408 VFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGL 467
Query: 414 LQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
+++G + + + E + +VD+ R G + +A+ + PN W L+
Sbjct: 468 VKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLL 527
Query: 472 NGYSHH 477
+ +H
Sbjct: 528 SACRNH 533
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 166/396 (41%), Gaps = 97/396 (24%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
VS N I ++G + +AR LFD MP+ + ++SWN+M+ GY A+ +E L + +
Sbjct: 189 VSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGY---ARSEEGLRVAWELF 245
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
K + ++ NS+IDG C+ C ++E
Sbjct: 246 EEMPKRDLISW----------NSMIDG----CV---------------------KCGKME 270
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A +F+++ + + + W+ M+ GY + + A +F +MP++DV+ +++GY ++
Sbjct: 271 NAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGH 330
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E AL F M E P+ T + A A+LG F EG +H + GF E +G
Sbjct: 331 LME-ALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLG 389
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL------ 310
ALI+ Y C + D A+ V++ +++ ++ N++I GL G E A +F +
Sbjct: 390 VALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVK 449
Query: 311 ----------------------------------TEANSISYNSMIKGYAVYGQVDDSKR 336
E Y M+ G V+++K+
Sbjct: 450 PDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKK 509
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
EKMP +E N V W +++S
Sbjct: 510 FVEKMP----------------IEPNDVVWRTLLSA 529
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 6/226 (2%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-H 76
+VS + + G++ AR LFD+MP R V+S N M+ GY + E+L+ M
Sbjct: 284 VVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLS 343
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R + + T LS AQL +G +HC + +G+ E +G L+ YA C I+
Sbjct: 344 RKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSID 403
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYA 192
A VF+++ + + W+ ++ G L AF++F++M K D + + +++
Sbjct: 404 NALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNA-C 462
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
++ L F MR + P + ++ R G E K
Sbjct: 463 NHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAK 508
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 201/690 (29%), Positives = 330/690 (47%), Gaps = 91/690 (13%)
Query: 22 NKAITECGRNGQLVTARNLFD--QMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N I G+ G L AR LFD M VSWN+++ + E+LSL M
Sbjct: 184 NALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVG 243
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V N TF L + + G IH VLKS + +V + L+ YA
Sbjct: 244 VASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYA--------- 294
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+C M DA VF M +D V W L+SG ++ +
Sbjct: 295 ----------------------KCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQN-ELYS 331
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
AL FR M+ SG+ P++ + ++I A R G +GK VH I+ G + + IG L
Sbjct: 332 DALNYFRDMQNSGQK-PDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTL 390
Query: 260 IEFY--CGCEAFDG-----------------------------AMRVYDRLENPCLNASN 288
++ Y C C + G A+ ++ +++ ++
Sbjct: 391 VDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDP 450
Query: 289 SLI-------NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+I +GL S I + + A+ + N+++ Y G +D ++R FE +
Sbjct: 451 MMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESI 510
Query: 342 PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
+ I+S W SMI+ V N L +AL+L+ ++++ I
Sbjct: 511 RSKDIVS-----------------WTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAI 553
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
A + L SL++G+ +H L++ F + +SLVDMY+ CG++ +++ F S+
Sbjct: 554 ISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQ 613
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
++ WT+++N HG G++A+ LF+ M +Q+++P+ TF+ +L AC +GL+ EG +
Sbjct: 614 RDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRF 673
Query: 522 FRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWM 580
F MK Y + P EHY C+VDLL RS L EA F+++MPI+ + +W ALL AC
Sbjct: 674 FEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHS 733
Query: 581 NMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWI 640
N E+GE AA+++ D + Y ++SNI+A G+W ++R R+ +KK+PGCSWI
Sbjct: 734 NKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWI 793
Query: 641 ELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
E+++++H F D+++P + IY L T
Sbjct: 794 EVDNKIHTFMARDKSHPQTDDIYLKLAQFT 823
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 136/569 (23%), Positives = 254/569 (44%), Gaps = 55/569 (9%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L A +FD+M RT+ SWN ++ + K+ E++ L M V ++ TF
Sbjct: 90 GKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFP 149
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++L C L G +IH + +K GY F FV + L+ Y C ++ A+ +FD
Sbjct: 150 SVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDG---- 205
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
I M K+D V W +IS + + C +AL LFR M
Sbjct: 206 -------------------------IMMEKEDTVSWNSIISAHVAEGN-CLEALSLFRRM 239
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+E G N YTF + ++ G +HG ++K D + ALI Y C
Sbjct: 240 QEVGV-ASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGR 298
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----NRLTEANSISYNSMIKG 324
+ A RV++ + + N+L++GL+ DA F N + + +S ++I
Sbjct: 299 MEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAA 358
Query: 325 YAVYGQVDDSKRLFEKMPHRSIIS----LNTMISVIPE--------------MERNPVTW 366
G + K + + S NT++ + + E++ ++W
Sbjct: 359 SGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISW 418
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
++I+GY QN H +A+ L+ ++ +D + ACS L S + +H ++ K
Sbjct: 419 TTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFK 478
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+++ + ++V++Y G I+ A+ +F SI S ++ +WT+++ H+GL EA+ L
Sbjct: 479 RDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALEL 537
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
F + + +I P++ + LSA + +G +I + G + +VD+
Sbjct: 538 FYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYAC 597
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + + + + + D ++W ++++A
Sbjct: 598 CGTVENSRKMFHSVK-QRDLILWTSMINA 625
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 140/582 (24%), Positives = 257/582 (44%), Gaps = 104/582 (17%)
Query: 39 NLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLN 98
++ +P++ + S NT+ G K A +SL+L+ST + E S +L +C
Sbjct: 4 SILTPLPLKPI-SVNTLNKGTLKPAF--QSLTLLSTHPLATPSRLEHAHSLLLDLCVAAK 60
Query: 99 SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLV 158
+L G+Q+H L+LKS F + + L+ Y C + +A +VFDE+ E W+ ++
Sbjct: 61 ALPQGQQLHALLLKSHLSAF--LATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMG 118
Query: 159 GYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
+V +A +++ KD+ V ++D C
Sbjct: 119 AFVSSGKYLEAIELY-----KDMRV-------LGVAIDAC-------------------- 146
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD- 277
TF SV++AC LG G +HG+ +KCG+ + ALI Y C GA ++D
Sbjct: 147 -TFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDG 205
Query: 278 -RLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISY-------------- 318
+E + NS+I+ ++ G +A +F R+ E +N+ ++
Sbjct: 206 IMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVK 265
Query: 319 ---------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
N++I YA G+++D+ R+FE M
Sbjct: 266 LGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESM---------------- 309
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
+ R+ V+WN+++SG VQN L+ AL + M+ + + L A G+L +G
Sbjct: 310 -LCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKG 368
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+ +HA+ ++ +SN+ +G +LVDMY++C + +F + ++ +WT ++ GY+ +
Sbjct: 369 KEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQN 428
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH- 536
EA+ LF + + + + VL AC +GL + R + Y L
Sbjct: 429 EFHLEAINLFRKVQVKGMDVDPMMIGSVLRAC--SGL--KSRNFIREIHGYVFKRDLADI 484
Query: 537 --YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+V++ G GH+ A + + + D V W ++++ C
Sbjct: 485 MLQNAIVNVYGEVGHIDYARRAFESIRSK-DIVSWTSMITCC 525
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 35/222 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I+ N + G G + AR F+ + + +VSW +M+ E+L L ++ +
Sbjct: 484 IMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQ 543
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+N++ + + LS A L+SL GK+IH +++ G+ + S L+ YA C +E
Sbjct: 544 TNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVEN 603
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
++++F + + +D+++WT +I+ A + G
Sbjct: 604 SRKMFHSVKQ-------------------------------RDLILWTSMIN--ANGMHG 630
Query: 198 C-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
C KA+ LF+ M + +P+ TF +++ AC+ G EGK
Sbjct: 631 CGNKAIALFKKMTDQNV-IPDHITFLALLYACSHSGLMVEGK 671
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 262/483 (54%), Gaps = 52/483 (10%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A +F ++P + +W +I YA S E AL +F M + +P++YTF +++C
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTP-EAALTIFHQMLHA-SVLPDKYTFTFALKSC 118
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
EG+ +HG ++K G D I LI Y C
Sbjct: 119 GSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASC---------------------- 156
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD-DSKRLFEKMPHRSII 347
G IEDA + +R+ E + +S+N+++ YA G ++ S+R+F + P
Sbjct: 157 ---------GCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELASRRVFGETP----- 202
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
+N V+WN+MI+GY + L L+ M+ + T + A
Sbjct: 203 ------------VKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSA 250
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ +G+L QG+ +HA++ K + +V T+LVDMYS+CGSI A F+S +++ W
Sbjct: 251 CAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTW 310
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
++++G S HG G A+ +F ML + PN TFV VLSAC RAGL++EG ++F M
Sbjct: 311 NSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVH 370
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+G+ PT+EHY C+VDLLGR G L EAEE ++ MP + +VVW +LL AC N+E+ E
Sbjct: 371 VHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAE 430
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
R AQK+ L + S++V LSN+YA +G+W M++R+++ V+KDPGCS IE++ V
Sbjct: 431 RVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTV 490
Query: 647 HAF 649
+ F
Sbjct: 491 YEF 493
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 211/421 (50%), Gaps = 25/421 (5%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A ++F ++P WNT++ Y+ + +L++ M ++V ++ TF+ L C
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGS 120
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ + +G+QIH VLK+G F+ + L+ YA+C IE+A+ + D + E + + W+ +
Sbjct: 121 FSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNAL 180
Query: 157 LVGYVQCNLMSDAF-DVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
L Y + LM A VF + P K+VV W +I+GY+ + E L LF M+ +G
Sbjct: 181 LSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSE-VLVLFEDMQHAGVK- 238
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ T SV+ ACA +GA +G+ VH + K G D + AL++ Y C + + A+ V
Sbjct: 239 PDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEV 298
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQV 331
++ ++ NS+I+GL + G + A IF+ + + N +++ ++ + G +
Sbjct: 299 FNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLL 358
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
D+ + +F M H + + P +E + M+ + L E+A +L ++K
Sbjct: 359 DEGREMFNLMVH--------VHGIQPTIEH----YGCMVDLLGRVGLLEEAEEL---VQK 403
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGSIN 450
+ + L AC G+++ + + L++ +P ES+ +V L +MY+ G
Sbjct: 404 MPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFV--QLSNMYASMGRWK 461
Query: 451 D 451
D
Sbjct: 462 D 462
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 150/335 (44%), Gaps = 43/335 (12%)
Query: 15 ETLIVSTNKAITECGRNGQL-VTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
E +VS N ++ G + + +R +F + P++ VVSWN M+ GYS +F E L L
Sbjct: 171 ERDVVSWNALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFE 230
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M + VK + T ++LS CA + +L G+ +H + K+G FV + L+ Y+ C
Sbjct: 231 DMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCG 290
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
IE+A VF N L +KD+ W +ISG +
Sbjct: 291 SIEKALEVF------NSCL-------------------------RKDISTWNSIISGLST 319
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC-GFEFD 252
G + AL++F M G PNE TF V+ AC+R G EG+ + L++ G +
Sbjct: 320 HGSG-QHALQIFSEMLVEGFK-PNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPT 377
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS---NSLINGLISMGRIEDAELIFNR 309
G +++ + A + ++ P AS SL+ + G +E AE + +
Sbjct: 378 IEHYGCMVDLLGRVGLLEEAEELVQKM--PQKEASVVWESLLGACRNHGNVELAERVAQK 435
Query: 310 LTE---ANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
L E S S+ + YA G+ D + +KM
Sbjct: 436 LLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKM 470
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 8/226 (3%)
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSL---VDMYSRCGSINDAQASFSSISSPNVAAWTA 469
S+ + HAH++K+ + + + L V S +I A + FS I +PN W
Sbjct: 19 SISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNT 78
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
++ Y++ A+ +F ML ++P+ TF L +C V EG +I + G
Sbjct: 79 IIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTG 138
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ L ++ L G + +A + M +E D V W ALLSA + + E A+
Sbjct: 139 LGDDLFIQNTLIHLYASCGCIEDARHLLDRM-LERDVVSWNALLSA---YAERGLMELAS 194
Query: 590 QKMFGLDK-KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
+++FG K + ++ + Y+ G++ + + + + + H VK D
Sbjct: 195 RRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPD 240
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 203/673 (30%), Positives = 317/673 (47%), Gaps = 61/673 (9%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV---KLNET 85
R L A LF++ P +TV WN +L Y K+ E+LSL M+ + + +
Sbjct: 47 ARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNY 106
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T S L C+ L L GK IH + K + FVGS L+ Y+
Sbjct: 107 TVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYS--------------- 151
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+C M+DA VF + PK+DVV+WT +I+GY ++ E AL F
Sbjct: 152 ----------------KCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQN-GSPELALAFF 194
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M + P+ T S ACA+L F G+ VHG + + GF+ + +++ Y
Sbjct: 195 SRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGK 254
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSM 321
+ A ++ + + + +S++ G +A +FN + E N ++ S
Sbjct: 255 TGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISA 314
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV---------------IPEMERNP--- 363
++ A +++ K + K+ L+ +S I R P
Sbjct: 315 LRACASSSNLEEGKHI-HKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKD 373
Query: 364 -VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
V+W + SGY + + K+L ++ M + A S LG +QQ LHA
Sbjct: 374 VVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHA 433
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+ K+ F++N ++G SL+++Y++C SI++A F + +V W++++ Y HG G E
Sbjct: 434 FVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEE 493
Query: 483 AVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCV 540
A+ LF M D+ PN TFV +LSAC AGL+ EG+K+F M Y ++P EHY +
Sbjct: 494 ALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIM 553
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
VDLLGR G L +A + I +MP++ VWGALL AC N+++GE AA +F LD
Sbjct: 554 VDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHA 613
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
Y +LSNIY V W +R + KK G S +E+ + VH+F DR + +
Sbjct: 614 GYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIASDRFHGESD 673
Query: 661 VIYATLEHLTANL 673
IY L L A +
Sbjct: 674 QIYGMLRKLDARM 686
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 191/463 (41%), Gaps = 61/463 (13%)
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG--ENM 215
V Y + + A +F + P K V +W L+ Y E L LF M E
Sbjct: 44 VLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVE-TLSLFHQMNADAITEER 102
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ YT +++C+ L GK++HG L K + D +G ALIE Y C + A++V
Sbjct: 103 PDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKV 162
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS------------------ 317
+ + S+I G G E A F+R+ +S
Sbjct: 163 FTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSD 222
Query: 318 ----------------------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
NS++ Y G + + LF +MP++ IIS
Sbjct: 223 FNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIIS------- 275
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
W+SM++ Y N AL L+ M I+ R T AC+ +L+
Sbjct: 276 ----------WSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLE 325
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+G+ +H V FE ++ V T+L+DMY +C S +A F+ + +V +W L +GY+
Sbjct: 326 EGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYA 385
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
G+ +++ +F ML P+A V +L+A G+V + + + + G
Sbjct: 386 EIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEF 445
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
+++L + + A + K M + D V W ++++A F
Sbjct: 446 IGASLIELYAKCSSIDNANKVFKGMRRK-DVVTWSSIIAAYGF 487
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 159/375 (42%), Gaps = 76/375 (20%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T + N + G+ G + +A NLF +MP + ++SW++M+ Y+ +L+L +
Sbjct: 239 DTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNE 298
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++LN T + L CA ++L +GK IH L + G+E V + L+ Y CF
Sbjct: 299 MIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFS 358
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+ A +F+ + + + + W+++ GY + + + VF M
Sbjct: 359 PKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNML----------------- 401
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
S P+ ++ A + LG + +H + K GF+ +E
Sbjct: 402 ----------------SYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEF 445
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
IG +LIE Y C + D A +V F + +
Sbjct: 446 IGASLIELYAKCSSIDNANKV-------------------------------FKGMRRKD 474
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
++++S+I Y +GQ +++ +LF +M + S +++ N VT+ S++S
Sbjct: 475 VVTWSSIIAAYGFHGQGEEALKLFYQMSNHS------------DVKPNDVTFVSILSACS 522
Query: 375 QNNLHEKALQLYMTM 389
L E+ ++++ M
Sbjct: 523 HAGLIEEGIKMFHVM 537
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 7/183 (3%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
+ R L C S+ Q LH+ +K + +V T L +Y+R S+ A
Sbjct: 2 KRRDLLVKLLETCCSKISIPQ---LHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKL 58
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV---PNAATFVGVLSACVRA 512
F V W AL+ Y G E + LF M I P+ T L +C
Sbjct: 59 FEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGL 118
Query: 513 GLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+ G I +K + + + +++L + G +++A + + P + D V+W ++
Sbjct: 119 QKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQ-DVVLWTSI 177
Query: 573 LSA 575
++
Sbjct: 178 ITG 180
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 209/679 (30%), Positives = 331/679 (48%), Gaps = 104/679 (15%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR----------SNVKLNETTFST 89
+F+ + +WNT++ + L L ++ H+ S+ K + T+
Sbjct: 60 IFNHLRNPNTFTWNTIMRAH---------LYLQNSPHQALLHYKLFLASHAKPDSYTYPI 110
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L CA S +G+Q+H + SG++ +V + L+ YA C + A+RVF+E +
Sbjct: 111 LLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLD 170
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMP-------------------------------- 177
+ W+ +L GYVQ + +A VF MP
Sbjct: 171 LVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRG 230
Query: 178 -KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
++D+V W+ ++S Y ++ G E+AL LF M+ SG + +E S + AC+R+
Sbjct: 231 RERDMVSWSAMVSCYEQNEMG-EEALVLFVEMKGSGVAV-DEVVVVSALSACSRVLNVEM 288
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR-LENPCLNASNSLINGLI 295
G+ VHGL +K G E S+ ALI Y C A R++D E L + NS+I+G +
Sbjct: 289 GRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYL 348
Query: 296 SMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
G I+DAE++F + E + +S+++MI GYA + ++ LF++M + V
Sbjct: 349 RCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEM---------QLHGV 399
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
P+ E AL ++ AC+ L +L
Sbjct: 400 RPD---------------------ETALVSAIS------------------ACTHLATLD 420
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G+ +HA++ + + NV + T+L+DMY +CG + +A F ++ V+ W A++ G +
Sbjct: 421 LGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLA 480
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTL 534
+G +++ +F M + VPN TF+GVL AC GLVN+G F SM + + +
Sbjct: 481 MNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANI 540
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
+HY C+VDLLGR+G L EAEE I MP+ D WGALL AC + E+GER +K+
Sbjct: 541 KHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQ 600
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
L +V+LSNIYA G WG ++IR + V K PGCS IE N VH F D+
Sbjct: 601 LQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDK 660
Query: 655 NNPNCNVIYATLEHLTANL 673
+P N I L+ + A L
Sbjct: 661 THPQINDIEHMLDVVAAKL 679
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 33/221 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S N I+ R G + A LF MP + VVSW+ M+ GY++ F E+L+L M
Sbjct: 337 LISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQL 396
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V+ +ET + +S C L +L GK IH + ++ + + + L+ Y C +E
Sbjct: 397 HGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVEN 456
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +VF M +K V W +I G A +
Sbjct: 457 A-------------------------------LEVFYAMEEKGVSTWNAVILGLAMN-GS 484
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
E++L +F M+++G +PNE TF V+ AC +G +G+
Sbjct: 485 VEQSLNMFADMKKTG-TVPNEITFMGVLGACRHMGLVNDGR 524
>gi|414878289|tpg|DAA55420.1| TPA: hypothetical protein ZEAMMB73_457942 [Zea mays]
Length = 534
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 273/510 (53%), Gaps = 22/510 (4%)
Query: 170 FDVFIKMPKKDVVVWTKLISGYAK----SVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
FD + ++V +WT I+ YA+ S E AL LFR M G PN +T SV+
Sbjct: 42 FDNAVPTACENVYLWTATIAAYARHASSSPSVAEGALTLFRLMLRHGVPRPNAFTASSVV 101
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
R C+ L A G VHG L+ G E + AL++ Y A RV+D + +
Sbjct: 102 RCCSALRAVRVGIQVHGFLVNAGLGRAEHVRAALVDMYGNHGRVADARRVFDEMSATSVV 161
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
N+++ + G +E ++F+R+ E + IS+N+++ GY G ++ LFE+MP
Sbjct: 162 LGNTMVACYVRAGDVESGRVVFDRMVERDLISWNTLMMGYLRQGGAGVARELFEEMP--- 218
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
+RN +WN I+ Y Q A+ ++ MR +T +VL
Sbjct: 219 --------------DRNVNSWNMAIAAYSQERSWADAVAVFNRMRLARFQPDPATMAVLM 264
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
AC+ LGSL + +H L K E N +V SL+DMY++CGSI+ A F +
Sbjct: 265 SACAQLGSLSVARQVHGILRKGCVEMNFHVLNSLIDMYAKCGSISQAHLLFVETHLKDTV 324
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
++ ++ + HG G +A+ +F+ M ++ + P+A T +GVLSAC AGLV++G F SM
Sbjct: 325 SYNVMICALARHGHGRDALQVFDEMSKERLQPDAVTLLGVLSACAHAGLVHDGKFYFESM 384
Query: 526 KS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
K+ Y + + +HY C+VDL GR+G + EA E + MP+E A VWGAL++AC N+EV
Sbjct: 385 KTNYAIEQSPDHYACMVDLYGRAGLIKEAYELARAMPMEPHAGVWGALINACRKHCNVEV 444
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
G+ AA+++ ++ + YV+L+N A +W + + + ++K GCSW+E+ +
Sbjct: 445 GKVAARELIAIEPRNPGTYVLLANTLARGQQWEFVETVWQSMRGKGIEKTAGCSWLEVEN 504
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
VH F + + ++PN + IY+ LEHL L
Sbjct: 505 VVHEFLMGESSHPNSDEIYSILEHLYLQLT 534
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 197/475 (41%), Gaps = 60/475 (12%)
Query: 5 ATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQ-MPI--RTVVSWNTMLCGYSK 61
A Q Q + L + A++ + AR +FD +P V W + Y++
Sbjct: 6 ARQLQVQLLVRGLPLPARAAVSLIASSHSPGHARAVFDNAVPTACENVYLWTATIAAYAR 65
Query: 62 WAKFDES-----LSLVSTMHRSNV-KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY 115
A S L+L M R V + N T S+++ C+ L ++ G Q+H ++ +G
Sbjct: 66 HASSSPSVAEGALTLFRLMLRHGVPRPNAFTASSVVRCCSALRAVRVGIQVHGFLVNAGL 125
Query: 116 ECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIK 175
E V + L+ Y N + +A+RVFDE+ + +L + M+ YV+ + VF +
Sbjct: 126 GRAEHVRAALVDMYGNHGRVADARRVFDEMSATSVVLGNTMVACYVRAGDVESGRVVFDR 185
Query: 176 MPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN--------------------- 214
M ++D++ W L+ GY + G A +LF M + N
Sbjct: 186 MVERDLISWNTLMMGYLRQ-GGAGVARELFEEMPDRNVNSWNMAIAAYSQERSWADAVAV 244
Query: 215 ---------MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
P+ T ++ ACA+LG+ + VHG+L K E + + +LI+ Y
Sbjct: 245 FNRMRLARFQPDPATMAVLMSACAQLGSLSVARQVHGILRKGCVEMNFHVLNSLIDMYAK 304
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSM 321
C + A ++ + N +I L G DA +F+ ++ + ++++ +
Sbjct: 305 CGSISQAHLLFVETHLKDTVSYNVMICALARHGHGRDALQVFDEMSKERLQPDAVTLLGV 364
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK 381
+ A G V D K FE M I E++P + M+ Y + L ++
Sbjct: 365 LSACAHAGLVHDGKFYFESMKTNYAI------------EQSPDHYACMVDLYGRAGLIKE 412
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYV 435
A +L R + ++ + L +AC +++ G++ L+ P YV
Sbjct: 413 AYEL---ARAMPMEPHAGVWGALINACRKHCNVEVGKVAARELIAIEPRNPGTYV 464
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 198/711 (27%), Positives = 340/711 (47%), Gaps = 121/711 (17%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
+S N I+ + G+L AR LFD M RT VSW ++ GY + + E+ L + M R
Sbjct: 75 ISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRG 134
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
++ + T T+LS +L + QIH V+K GYE
Sbjct: 135 GIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY--------------------- 173
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
N ++ + ++ Y + + + A +F M KD V + L++GY S +G
Sbjct: 174 ----------NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGY--SNEGL 221
Query: 199 -EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E+A++LF + SG P+++TF +++ A L G+ VHG ++K F ++ +G
Sbjct: 222 NEEAIELFLELHNSGIK-PSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGN 280
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL+++Y + ++++ +F + E + IS
Sbjct: 281 ALLDYYSKHD-------------------------------QVDEVGKLFYEMPELDGIS 309
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKM----------PHRSIISLNT--------------MI 353
YN +I YA GQ +S LF K+ P +++S+ T I
Sbjct: 310 YNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAI 369
Query: 354 SVIPEME-----------------------------RNPVTWNSMISGYVQNNLHEKALQ 384
+V E ++ V W +MIS YVQ HE+ +
Sbjct: 370 TVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGIN 429
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
++ MR+ + ++TF+ + AC+ L S+ G+ LH+ L+++ F SNVY G++L+D Y+
Sbjct: 430 VFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYA 489
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+CG + DA SF + N +W AL++ Y+ +G + F+ M++ P++ +F+
Sbjct: 490 KCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLS 549
Query: 505 VLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
VLSAC G V E + F SM Y V P EHYT +VD+L R+G EAE+ + +MP E
Sbjct: 550 VLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFE 609
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGL-DKKPISAYVILSNIYAVLGKWGKKMDI 622
++W ++L++C N E+ ++AA ++F + D + + Y+ +SNIYAV G+W +
Sbjct: 610 PSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKV 669
Query: 623 RKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+K + V+K P SW+E+ + H FS D+++P I + L+ +
Sbjct: 670 KKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEM 720
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 140/298 (46%), Gaps = 24/298 (8%)
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEK 340
NP SN +N + G + A +F+++ N+IS N MI G+ +G++ ++ LF+
Sbjct: 40 NPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDG 99
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
M +ER V+W +I GY+Q+N ++A +LY MR+ I+ T
Sbjct: 100 M-----------------VERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVT 142
Query: 401 FSVLFHACSCLGSLQQGQL---LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
L S G L+ + +H H++K +E N+ V SLVD Y + + A F
Sbjct: 143 LVTLL---SGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
+ + + + +LM GYS+ GL EA+ LF + I P+ TF +LSA V
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G ++ + V + ++D + + E + +MP ELD + + ++++
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMP-ELDGISYNVVITS 316
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
VL ++ + SL L+ AH+VKT F N V+ + G + A F + +
Sbjct: 13 VLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAK 72
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
N + +++G+ G S+A LF+ M+E+ A ++ ++ +++ E +++
Sbjct: 73 NTISLNMMISGHLKFGKLSKARELFDGMVER----TAVSWTILIGGYLQSNQSKEAFRLY 128
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
M+ G+ P Y +V LL G L
Sbjct: 129 ADMRRGGIEPD---YVTLVTLLSGFGEL 153
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 296/556 (53%), Gaps = 62/556 (11%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A VF +P+ + ++W + G+A S D ALKL+ M G +PN +TF ++++C
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVS-ALKLYVVMISLGL-LPNFFTFPFLLKSC 85
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A+ F EG+ +HG ++K GF+ D + +LI Y + A +V+DR + + +
Sbjct: 86 AKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYT 145
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM------P 342
+LI G S G IE A+ +F+ + + +S+N+MI GYA G + LF++M P
Sbjct: 146 ALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKP 205
Query: 343 HRSIIS---------------------------------LNTMISVIP---EME------ 360
S ++ +N +I + E+E
Sbjct: 206 DESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELL 265
Query: 361 -----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ ++WN++I GY NL+++AL L+ M + T + AC+ LG++
Sbjct: 266 EGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 325
Query: 416 QGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDA-QASFSSISSPNVAAWTAL 470
G+ +H ++ K + + TSL+DMY++CG I+ A Q S SS + +++ W A+
Sbjct: 326 IGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAM 385
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YG 529
+ G++ HG + A +F M + I P+ TFVG+LSAC +G+++ G IFRSM+ Y
Sbjct: 386 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYN 445
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ P LEHY C++DLLG SG EAEE I MP+E D V+W +LL AC N+E+GE A
Sbjct: 446 ITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFA 505
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD-PGCSWIELNSRVHA 648
+K+ ++ + +YV+LSNIYA GKW + IR L +KK PGCS IE++S VH
Sbjct: 506 KKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHE 565
Query: 649 FSVEDRNNPNCNVIYA 664
F + D+ +P IY
Sbjct: 566 FIIGDKLHPQNREIYG 581
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 243/524 (46%), Gaps = 46/524 (8%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A ++F+ +P + WN M G++ + +L L M + N TF +L
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
CA+ + +G+QIH VLK G++ +V + L+ YA +E+A++VFD + + +
Sbjct: 85 CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++ GY + A +F ++P KDVV W +ISGYA++ + +KAL+LF+ M ++
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGN-YKKALELFKEMMKTNV 203
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+E T +V+ ACA+ G+ G+ VH + GF + I ALI+ Y C + A
Sbjct: 204 K-PDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETAC 262
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYG 329
+ + L N + + N+LI G M ++A L+F + + N ++ S++ A G
Sbjct: 263 ELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 322
Query: 330 QVDDSK--RLFEKMPHRSIISLNTM---------------ISVIPEME------RNPVTW 366
+D + ++ + ++ N I P++ R+ TW
Sbjct: 323 AIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTW 382
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N+MI G+ + A ++ MRK I+ TF L ACS G L G+ + + +
Sbjct: 383 NAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQ 442
Query: 427 ----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG--- 478
TP + ++D+ G +A+ +++ P+ W +L+ HG
Sbjct: 443 DYNITPKLEHY---GCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLE 499
Query: 479 LG-SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
LG S A L +I E N ++V + + AG NE KI
Sbjct: 500 LGESFAKKLIKIEPE-----NPGSYVLLSNIYATAGKWNEVXKI 538
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 207/448 (46%), Gaps = 68/448 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS IT G + +A+ +FD++PI+ VVSWN M+ GY++ + ++L L M +
Sbjct: 141 VVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK 200
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+NVK +E+T +T++S CAQ S+ G+Q+H + G+ + + L+ Y+ C E+E
Sbjct: 201 TNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVET 260
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A + + L + + W+ ++ GY NL
Sbjct: 261 ACELLEGLSNKDVISWNTLIGGYTHMNLY------------------------------- 289
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH--------GLLIKCGF 249
++AL LF+ M SGE PN+ T S++ ACA LGA G+ +H G+++
Sbjct: 290 -KEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNA- 346
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFN 308
S+ +LI+ Y C D A +V D N L+ N++I G GR A IF+
Sbjct: 347 ---SSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFS 403
Query: 309 RL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV 364
R+ E + I++ ++ + G +D + +F S+ ++ P++E
Sbjct: 404 RMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFR--------SMRQDYNITPKLEH--- 452
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+ MI + L ++A ++ TM ++ + L AC G+L+ G+ L
Sbjct: 453 -YGCMIDLLGHSGLFKEAEEMINTM---PMEPDGVIWCSLLKACKIHGNLELGESFAKKL 508
Query: 425 VKT-PFESNVYVGTSLVDMYSRCGSIND 451
+K P YV L ++Y+ G N+
Sbjct: 509 IKIEPENPGSYV--LLSNIYATAGKWNE 534
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 187/632 (29%), Positives = 316/632 (50%), Gaps = 24/632 (3%)
Query: 47 RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
+ V WN + ++ ++DE++++ M V + T + +L C + +L +G+ +
Sbjct: 119 KDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAV 178
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H LK + V L YA ++ A RV D + + + W+ ++ + L+
Sbjct: 179 HAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLV 238
Query: 167 SDAFDVFIKM----PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
DA ++ +M P+ +V W ++SG ++ E AL + M + G P+ T
Sbjct: 239 DDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDRE-ALGVVASMLKQGLR-PDATTVS 296
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
S++++ A G G +H ++ E D G AL++ Y C D A +V D LE+
Sbjct: 297 SLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHR 356
Query: 283 CLNASNSLINGLISMGR----IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLF 338
L NSL+ G + GR +E EL+ + + ++N +I GY++ GQ + L
Sbjct: 357 NLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLL 416
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
++ V P N V+W S+ISG N +E + M+K + +
Sbjct: 417 RQI---------KAAGVTP----NVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSL 463
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
T SVL AC+ L ++G+ LH ++ ++ ++ V T+L+DMYS+ GS+ A+ F S
Sbjct: 464 VTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFES 523
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
I N+ A++ G + HG G EA+ LF M + P++ TF +L+AC GLV EG
Sbjct: 524 IQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEG 583
Query: 519 MKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
+ F SM++ YGV PT E+Y C+VDLL R G+L EA +FI+ PI+ A WGALL+ C
Sbjct: 584 WEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCS 643
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
N+ + E AA+ +F L+ + Y+++ N+Y + + ++ + V PG
Sbjct: 644 IHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGW 703
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
SWI++ +H F V+ + +P IY L L
Sbjct: 704 SWIQIEQGIHVFEVDGKPHPETAEIYEELIRL 735
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 202/506 (39%), Gaps = 126/506 (24%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQM----PIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+V N + C R G + A L +M P V +WNT+L G S+ + E+L +V+
Sbjct: 222 VVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVA 281
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+M + ++ + TT S++L A L G +IHC L++ E + G+ L+ YA C
Sbjct: 282 SMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCG 341
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK----KDVVVWTKLIS 189
++ A++V D L N W+ ++ GY A ++ M K D+ W LI+
Sbjct: 342 RLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLIT 401
Query: 190 GYAKSVDG-CEKALKLFRWMRESGEN---------------------------------- 214
GY S++G +A+ L R ++ +G
Sbjct: 402 GY--SMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGV 459
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P+ T ++RACA L +GK +H ++ ++ D + ALI+ Y
Sbjct: 460 QPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMY----------- 508
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
+ SL++ A++IF + + N + N+M+ G AV+GQ ++
Sbjct: 509 ----------SKGGSLVS----------AKVIFESIQQKNLVLCNAMLTGLAVHGQGREA 548
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
LF M WN SG +++
Sbjct: 549 IELFHDM------------------------WN---SGLKPDSI---------------- 565
Query: 395 DRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
TF+ L AC +G + +G + + K + +VD+ +RCG +++A
Sbjct: 566 -----TFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAM 620
Query: 454 ASFS-SISSPNVAAWTALMNGYSHHG 478
S P + W AL+ G S HG
Sbjct: 621 DFIERSPIDPGASHWGALLTGCSIHG 646
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 17 LIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
++VST I + G LV+A+ +F+ + + +V N ML G + + E++ L M
Sbjct: 498 MVVST-ALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMW 556
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDG 103
S +K + TF+ +L+ C + + +G
Sbjct: 557 NSGLKPDSITFTALLTACRSMGLVTEG 583
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 189/641 (29%), Positives = 325/641 (50%), Gaps = 57/641 (8%)
Query: 53 NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
N L SK K +E+ + M ++ V ++ ++ + C +L SL G+ +H
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH----- 106
Query: 113 SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
R+ + + LL + +L Y +C + DA +
Sbjct: 107 --------------------------DRMRMGIENPSVLLQNCVLQMYCECRSLEDADKL 140
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
F +M + + V T +IS YA+ +KA+ LF M SG+ P+ + +++++
Sbjct: 141 FDEMSELNAVSRTTMISAYAEQ-GILDKAVGLFSGMLASGDKPPSS-MYTTLLKSLVNPR 198
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
A G+ +H +I+ G + SI ++ Y C GA RV+D++ A L+
Sbjct: 199 ALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMV 258
Query: 293 GLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRL---FEKMPHRS 345
G GR DA +F L E +S ++ ++K A +++ K++ K+ S
Sbjct: 259 GYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLES 318
Query: 346 IISLNTMI--------------SVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+S+ T + E+ E N V+W+++ISGY Q + E+A++ + ++R
Sbjct: 319 EVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLR 378
Query: 391 -KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
K A T++ +F ACS L G +HA +K + Y ++L+ MYS+CG +
Sbjct: 379 SKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCL 438
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+DA F S+ +P++ AWTA ++G++++G SEA+ LFE M+ + PN+ TF+ VL+AC
Sbjct: 439 DDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTAC 498
Query: 510 VRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
AGLV +G +M + Y V PT++HY C++D+ RSG L EA +F+K+MP E DA+
Sbjct: 499 SHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMS 558
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W LS CW N+E+GE A +++ LD + + YV+ N+Y GKW + ++ K +
Sbjct: 559 WKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNE 618
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+KK+ CSWI+ ++H F V D+++P IY L+
Sbjct: 619 RMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF 659
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 207/473 (43%), Gaps = 61/473 (12%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A LFD+M VS TM+ Y++ D+++ L S M S K + ++T+L
Sbjct: 134 LEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKS 193
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
+L G+QIH V+++G + +G++ Y C + AKRVFD++ +
Sbjct: 194 LVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAC 253
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++VGY Q DA +F+ + + V W
Sbjct: 254 TGLMVGYTQAGRARDALKLFVDLVTEGV------------------------EW------ 283
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
+ + F V++ACA L GK +H + K G E + S+G L++FY C +F+ A
Sbjct: 284 ---DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESAC 340
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-----NSISYNSMIKGYAVY 328
R + + P + +++I+G M + E+A F L NS +Y S+ + +V
Sbjct: 341 RAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVL 400
Query: 329 GQVDDSKRLFEKMPHRSII-------SLNTMIS----------VIPEMERNP--VTWNSM 369
+ ++ RS+I +L TM S V M+ NP V W +
Sbjct: 401 ADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAF 459
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ-LLHAHLVKTP 428
ISG+ +AL+L+ M + TF + ACS G ++QG+ L L K
Sbjct: 460 ISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYN 519
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG-YSHHGL 479
+ ++D+Y+R G +++A ++ P+ +W ++G ++H L
Sbjct: 520 VAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNL 572
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 186/412 (45%), Gaps = 58/412 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G LV A+ +FDQM ++ V+ ++ GY++ + ++L L + V+ + FS +L
Sbjct: 233 GWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVL 292
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
CA L L GKQIH V K G E VG+ L+ FY C E A R F E+ E N++
Sbjct: 293 KACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV 352
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS ++ GY Q + E+A+K F+ +R
Sbjct: 353 SWSAIISGYCQMSQF--------------------------------EEAVKTFKSLRSK 380
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK---CGFEFDESIGGALIEFYCGCEA 268
++ N +T+ S+ +AC+ L G VH IK G ++ ES ALI Y C
Sbjct: 381 NASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES---ALITMYSKCGC 437
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKG 324
D A V++ ++NP + A + I+G G +A +F ++ + NS+++ +++
Sbjct: 438 LDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTA 497
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
+ G V+ K + M + +V P ++ ++ MI Y ++ L ++AL+
Sbjct: 498 CSHAGLVEQGKHCLDTMLRK--------YNVAPTIDH----YDCMIDIYARSGLLDEALK 545
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYV 435
M+ + + ++ C +L+ G++ L + P ++ YV
Sbjct: 546 F---MKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYV 594
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
IT + G L A +F+ M +V+W + G++ + E+L L M +K N
Sbjct: 429 ITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNS 488
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCL 109
TF +L+ C+ + GK HCL
Sbjct: 489 VTFIAVLTACSHAGLVEQGK--HCL 511
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 202/724 (27%), Positives = 339/724 (46%), Gaps = 125/724 (17%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMP--IRTVVSWNTMLCGYS--KWAKFDE 67
M S N+ ++ R+GQL A +LF P +R V+W M+ ++ A+ +
Sbjct: 60 MPHRNNAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASD 119
Query: 68 SLSLVSTMHRSNVKLNETTFSTILSV---CAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
++SL M R V + T +T+L++ + I +H LK G
Sbjct: 120 AVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLG---------- 169
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
L N ++ + +L Y + L++ A VF +MP +D V +
Sbjct: 170 --------------------LLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTY 209
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
++ G +K E AL LF MR G +TF +V+ +G C G+ VHGL+
Sbjct: 210 NAMMMGCSKEGSHAE-ALDLFAAMRRKGL-AATRFTFSTVLTVATGVGDLCLGRQVHGLV 267
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
+ + + +L++FY C+ D + +
Sbjct: 268 AR-ATSSNVFVNNSLLDFYSKCDCLD-------------------------------EMK 295
Query: 305 LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM----------PHRSIISL----- 349
+F+ + E +++SYN MI GYA RLF +M P+ S++S+
Sbjct: 296 KLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVP 355
Query: 350 ------------------------NTMISV--------------IPEMERNPVTWNSMIS 371
N +I + I + ++ V+W +MI+
Sbjct: 356 HIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMIT 415
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
G VQN E+ALQL+ MR+ + R+TFS A S L + G+ LH++L+++ S
Sbjct: 416 GCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMS 475
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+V+ G++L+DMY++CG +++A +F + N +W A+++ Y+H+G A+ +FE ML
Sbjct: 476 SVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGML 535
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHL 550
P++ TF+ VLSAC GL E MK F M+ YG+ P EHY+CV+D LGR G
Sbjct: 536 CYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRF 595
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
+ +E + +MP E D ++W ++L +C N ++ AA+K+F + + YVILSNI+
Sbjct: 596 DKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIF 655
Query: 611 AVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
A GKW ++K + ++K+ G SW+E+ +V++FS D+ NP I LE L
Sbjct: 656 AKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLY 715
Query: 671 ANLN 674
++
Sbjct: 716 KEMD 719
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 168/390 (43%), Gaps = 46/390 (11%)
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
L +N + N+++ Y +G + ++R+F++MPH R+ VT+N+M
Sbjct: 170 LLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPH-----------------RDSVTYNAM 212
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ G + H +AL L+ MR+ + TR TFS + + +G L G+ +H LV
Sbjct: 213 MMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHG-LVARAT 271
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
SNV+V SL+D YS+C +++ + F + + ++ ++ GY+ + S + LF
Sbjct: 272 SSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFRE 331
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
M A + +LS + G +I + G+ ++D+ + G
Sbjct: 332 MQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGM 391
Query: 550 LHEAE-EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL-------DKKPIS 601
L A+ FI + V W A+++ C + E A Q G+ D+ S
Sbjct: 392 LDAAKTNFINKN--DKTGVSWTAMITGC---VQNGQQEEALQLFCGMRRAGLSPDRATFS 446
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTH----------LEVKKDPGCSWIELNSRVHAFS- 650
+ + S+ A++G + R H L++ GC L+ + F
Sbjct: 447 STIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGC----LDEALQTFDE 502
Query: 651 VEDRNNPNCNVIYATLEHLTANLNSVVLFD 680
+ +RN+ + N + + H N++ +F+
Sbjct: 503 MPERNSISWNAVISAYAHYGQAKNAIKMFE 532
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 25/306 (8%)
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTEA-NSISYNSMIKGYAVYGQVDDSKRLFE 339
+P N L++ LIS GR+ A +F+++ N+ S N M+ GY+ GQ+ + LF
Sbjct: 31 DPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLFL 90
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ--NNLHEKALQLYMTMRKLAIDRT 397
P P + R+ VTW MI + A+ L+ M + +
Sbjct: 91 SSP--------------PHL-RDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPD 135
Query: 398 RSTFSVLFHACSCLGSLQQGQL---LHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQ 453
R T + + + G + LH +K SNV V +L+D Y + G + A+
Sbjct: 136 RVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAAR 195
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F + + + A+M G S G +EA+ LF M + + TF VL+ G
Sbjct: 196 RVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVG 255
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G ++ + + + ++D + L E ++ +M IE D V + ++
Sbjct: 256 DLCLGRQV-HGLVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEM-IERDNVSYNVMI 313
Query: 574 SACWFW 579
A + W
Sbjct: 314 -AGYAW 318
>gi|345505208|gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
Length = 615
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 285/528 (53%), Gaps = 60/528 (11%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+D +W +I ++ V+ KAL LF M ++G ++ ++++ V++AC+RLG EG
Sbjct: 86 EDPFLWNAVIKSHSHGVEP-RKALLLFFLMLKNGVSV-DKFSLSLVLKACSRLGFVKEGM 143
Query: 239 VVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
HG L K G D + LI Y CGC F A +V+DR+ + NS+I+G +
Sbjct: 144 QXHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGF--ARQVFDRMSQRDSVSYNSMIDGYVK 201
Query: 297 MGRIEDA-EL---------------------------------IFNRLTEANSISYNSMI 322
G IE A EL +F+ + E + IS+NS+I
Sbjct: 202 CGLIESARELFDLMPSEKKNLISWNSMINGYAQRADGVDIASNLFDEMPEKDLISWNSLI 261
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ERNPVTWNS 368
GY +G+++D+K LF+KMP R +++ TM+ S+ +M +R+ V +NS
Sbjct: 262 DGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQRDVVAYNS 321
Query: 369 MISGYVQNNLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
M++GYVQN H +A+ ++ M K L+ D T T ++ A + LG L + +H + V
Sbjct: 322 MMAGYVQNRYHMEAIDIFNDMEKESHLSPDET--TLVIVLSAIAQLGRLSKAMDMHLYTV 379
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ F +G +L+DMYS+CGSI A F I + ++ W A++ G + HGLG A
Sbjct: 380 EKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIENKSIDHWNAMIGGLAIHGLGESAFD 439
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLL 544
+ + + I P+ TFVGVL+AC +GLV EG+ F MK + + P L+HY C+VD+L
Sbjct: 440 MLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMKRKHKIEPRLQHYGCMVDIL 499
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
RSG + A+ I++MPIE + V+W L+AC E GE A+ + S+YV
Sbjct: 500 SRSGRIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYV 559
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
+LSN+YA LG W + +R + +++K PGCSWIEL+ VH F V+
Sbjct: 560 LLSNMYASLGMWKEVRRVRTMMKERKIQKIPGCSWIELDGSVHEFFVD 607
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 194/421 (46%), Gaps = 28/421 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+M R VS+N+M+ GY K + + L M + K N ++++++
Sbjct: 172 GCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIESARELFDLM--PSEKKNLISWNSMI 229
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ AQ DG I + E + L+ Y IE+AK +FD++ + +
Sbjct: 230 NGYAQ---RADGVDIASNLFDEMPEKDLISWNSLIDGYVKHGRIEDAKDLFDKMPRRDVV 286
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY + + A +F +MP++DVV + +++GY ++ E A+ +F M +
Sbjct: 287 TWATMVDGYAKLGFVHQAKSLFDQMPQRDVVAYNSMMAGYVQNRYHME-AIDIFNDMEKE 345
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T V+ A A+LG + +H ++ F +G ALI+ Y C +
Sbjct: 346 SHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQ 405
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSISYNSMIKGYAV 327
AM V++R+EN ++ N++I GL G E A I R + + I++ ++ +
Sbjct: 406 AMGVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSH 465
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V + FE M + I P ++ + M+ ++ E A L
Sbjct: 466 SGLVKEGLLCFELMKRKHKIE--------PRLQH----YGCMVDILSRSGRIELAKNL-- 511
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRC 446
+ ++ I+ + ACS + G+L+ HL+ + + + YV L +MY+
Sbjct: 512 -IEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYV--LLSNMYASL 568
Query: 447 G 447
G
Sbjct: 569 G 569
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 65/255 (25%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E ++S N I ++G++ A++LFD+MP R VV+W TM+ GY+K ++ SL
Sbjct: 251 EKDLISWNSLIDGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQ 310
Query: 75 MHR--------------------------------SNVKLNETTFSTILSVCAQLNSLID 102
M + S++ +ETT +LS AQL L
Sbjct: 311 MPQRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSK 370
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
+H ++ + +G L+ Y+ C I++A VF+ + + W+ M+ G
Sbjct: 371 AMDMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIENKSIDHWNAMIGGLAI 430
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
L AFD+ +++ ++ + P++ TF
Sbjct: 431 HGLGESAFDMLLQIERRSI---------------------------------KPDDITFV 457
Query: 223 SVIRACARLGAFCEG 237
V+ AC+ G EG
Sbjct: 458 GVLNACSHSGLVKEG 472
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 200/701 (28%), Positives = 347/701 (49%), Gaps = 100/701 (14%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
++ R+G L A++++ + R V+ N ++ G K + E+ + + R + +N
Sbjct: 320 VSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVK-QQHGEAAAEIFMGARDSAAVNV 378
Query: 85 TTFSTILSVCAQLNS----LIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEAK 139
T+ +LS A+ ++ L G+++H VL++G+ + V +GL+ YA C I++A
Sbjct: 379 DTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKAC 438
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
RV F M +D + W +I+ ++ CE
Sbjct: 439 RV-------------------------------FQLMEARDRISWNTIITALDQN-GYCE 466
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
A+ + MR++ P+ + S + +CA LG G+ +H +K G D S+ AL
Sbjct: 467 AAMMNYCLMRQNSIG-PSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNAL 525
Query: 260 IEFY--CG----CEAFDGAMRVYDRL------------ENPCLNA----SNSLINGLIS- 296
++ Y CG C +M +D + + P + SN + +GL+
Sbjct: 526 VKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPN 585
Query: 297 ------------------MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLF 338
+G+ + ++ + +TE N++ N+++ YA G VD +RLF
Sbjct: 586 KVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVD-NALMSCYAKSGDVDSCERLF 644
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
+M R R+ ++WNSMISGY+ N ++A+ M
Sbjct: 645 SRMSGR----------------RDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDH 688
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
TFS++ +AC+ + +L++G +HA +++ ES+V V ++LVDMYS+CG I+ A F S
Sbjct: 689 CTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHS 748
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+S N +W ++++GY+ HGLG +A+ +FE M E P+ TFV VLSAC AGLV G
Sbjct: 749 MSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERG 808
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW- 577
+ F M+ YG++P +EHY+CV+DLLGR+G L + +E++K MP++ + ++W +L AC
Sbjct: 809 LDYFELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQ 868
Query: 578 --FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
+++G A++ + L+ + YV+ S +A +G+W R + VKK+
Sbjct: 869 SKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEA 928
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
G SW+ L VH F DR++PN IY L L + +
Sbjct: 929 GRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNA 969
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 150/595 (25%), Positives = 249/595 (41%), Gaps = 75/595 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N + + +L AR +FD MP R VSW ++ G+ +++ L M R
Sbjct: 103 ANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGP 162
Query: 81 KLNET--TFSTILSVC--AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
T TF ++L C + + L Q+H LV K+ + V + L+ Y +C
Sbjct: 163 GCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGP 222
Query: 137 E--AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
A+RVFD P +D++ W L+S YAK
Sbjct: 223 PILAQRVFD-------------------------------TTPVRDLITWNALMSVYAKR 251
Query: 195 VDG-CEKALKLFRWMR--ESG-ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI---KC 247
D C LFR M+ +SG E P E+TF S+I A + C ++ L + K
Sbjct: 252 GDAIC--TFTLFRAMQYDDSGIELRPTEHTFGSLITATYL--SSCSLGLLDQLFVRVLKS 307
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
G D +G AL+ + D A +Y L+ N LI GL+ E A IF
Sbjct: 308 GCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF 367
Query: 308 NRLTEANSISYNSMI-----------------KGYAVYGQVDDSKRLFEKMP-------- 342
++ +++ ++ + KG V+ V + ++ K+
Sbjct: 368 MGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNM 427
Query: 343 HRSIISLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
+ +++ V ME R+ ++WN++I+ QN E A+ Y MR+ +I +
Sbjct: 428 YAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAA 487
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
+C+ LG L GQ LH VK + V +LV MY CG +++ F+S+S+
Sbjct: 488 ISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSA 547
Query: 462 PNVAAWTALMNGY-SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+V +W ++M S +E+V +F M++ +VPN TFV L+A ++ G +
Sbjct: 548 HDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQ 607
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
I M +GV ++ +SG + E M DA+ W +++S
Sbjct: 608 IHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISG 662
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 119/526 (22%), Positives = 209/526 (39%), Gaps = 109/526 (20%)
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
+ +H V+K G F+ + L+ YA ++ A+RVFD + N + W+ ++ G+V
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
L DAF +F M +RE P +TF S
Sbjct: 145 GLPEDAFPLFRAM-------------------------------LREGPGCRPTSFTFGS 173
Query: 224 VIRACA-----RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG--AMRVY 276
V+RAC RLG + VHGL+ K F + ++ ALI Y C A RV+
Sbjct: 174 VLRACQDSGPDRLGFAVQ---VHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVF 230
Query: 277 DRLENPCLNASNSLINGLISMG-------------------RIEDAELIFNRLTEANSIS 317
D L N+L++ G + E F L A +S
Sbjct: 231 DTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLS 290
Query: 318 Y-------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
++++ +A +G +D++K ++ +
Sbjct: 291 SCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLK---------- 340
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
ERN VT N +I+G V+ E A +++M R A T+ VL A +
Sbjct: 341 -------ERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNV-DTYVVLLSAIAEFS 392
Query: 413 S----LQQGQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
+ L++G+ +HAH+++ + V LV+MY++CG+I+ A F + + + +W
Sbjct: 393 TAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISW 452
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
++ +G A++ + +M + I P+ + LS+C GL+ G ++
Sbjct: 453 NTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVK 512
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+G+ +V + G G + E E M D V W +++
Sbjct: 513 WGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAH-DVVSWNSIM 557
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 202/499 (40%), Gaps = 98/499 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I +N + + G + A +F M R +SWNT++ + + ++ M +
Sbjct: 418 IAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQ 477
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+++ + + LS CA L L G+Q+HC +K G V + L+ Y C
Sbjct: 478 NSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGEC----- 532
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
MS+ +++F M DVV W ++ A S
Sbjct: 533 --------------------------GRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAP 566
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+++++F M +SG +PN+ TF + + A L GK +H +++K G D ++
Sbjct: 567 ITESVQVFSNMMKSGL-VPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDN 625
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDA----------ELI 306
AL+ Y D R++ R+ S NS+I+G I G +++A E +
Sbjct: 626 ALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQM 685
Query: 307 FNRLT-----------------------------EANSISYNSMIKGYAVYGQVDDSKRL 337
+ T E++ + ++++ Y+ G++D + ++
Sbjct: 686 MDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKV 745
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
F M ++N +WNSMISGY ++ L KAL+++ M++
Sbjct: 746 FHSMS-----------------QKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPD 788
Query: 398 RSTFSVLFHACSCLGSLQQG----QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
TF + ACS G +++G +L+ + + E + ++D+ R G ++ Q
Sbjct: 789 HVTFVSVLSACSHAGLVERGLDYFELMEDYGILPRIEHY----SCVIDLLGRAGELDKIQ 844
Query: 454 ASFSSIS-SPNVAAWTALM 471
+ PN W ++
Sbjct: 845 EYMKRMPMKPNTLIWRTVL 863
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 140/335 (41%), Gaps = 40/335 (11%)
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
R G + +H ++K G D + L+ Y D A RV+D + +
Sbjct: 77 RPGCDASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTC 136
Query: 290 LINGLISMGRIEDAELIFNRL------TEANSISYNSMIK----------GYA--VYGQV 331
LI+G + G EDA +F + S ++ S+++ G+A V+G V
Sbjct: 137 LISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLV 196
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEM----------ERNPVTWNSMISGYVQNNLHEK 381
++ ++IS+ SV P + R+ +TWN+++S Y +
Sbjct: 197 SKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAIC 256
Query: 382 ALQLYMTMR----KLAIDRTRSTFSVLFHAC---SC-LGSLQQGQLLHAHLVKTPFESNV 433
L+ M+ + + T TF L A SC LG L Q L ++K+ S++
Sbjct: 257 TFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQ---LFVRVLKSGCSSDL 313
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
YVG++LV ++R G +++A+ + + N L+ G G A +F +
Sbjct: 314 YVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDS 373
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
V N T+V +LSA +G++ R + ++
Sbjct: 374 AAV-NVDTYVVLLSAIAEFSTAEQGLRKGREVHAH 407
>gi|413935435|gb|AFW69986.1| hypothetical protein ZEAMMB73_442164 [Zea mays]
Length = 658
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 189/667 (28%), Positives = 319/667 (47%), Gaps = 73/667 (10%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I R G++ AR +FD+M R V +WN M+ G ++ ++ + M N
Sbjct: 40 NSDIMAHFRAGRVGAARRVFDEMRERNVFTWNCMVSGLARNGLLADARGVFDAMPSRN-- 97
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ LL YA + EA+ +
Sbjct: 98 -------------------------------------SVSWAALLTGYARRGRVAEARDL 120
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD + N + W+ M+ GY++ ++ A ++F MP +D V W ++SGY +
Sbjct: 121 FDRMPHRNVVSWNAMVSGYLRNGMVDRARELFDAMPARDDVSWLMMVSGYMRR------- 173
Query: 202 LKLFRWMRE---SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
K FR RE + P ++++ A G + + + G + + D A
Sbjct: 174 -KRFREAREIFDRAPSPPPTSVCNALLSGYAGYGYLKDAEELFGRMQRP----DRVSWNA 228
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
+I Y A R++D + + +++ G + G ++ A +F + + + +++
Sbjct: 229 MITGYTRAGMMQVARRLFDEMPGKDTVSWTAIVRGYLQNGDVDAAWEVFQDMPDRDVLAW 288
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE--------------MERNPV 364
N+M+ G+ V ++DD+ RLF MP R ++S NT++ + +E++
Sbjct: 289 NTMMGGFVVSDRLDDALRLFADMPDRDLVSWNTILQGYIQQGDMDSATTWFRSMLEKDET 348
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+WN++ISGY E AL L M + ++T+SV+ C+ L +L G+++H
Sbjct: 349 SWNTVISGYKD----EGALSLLSEMTRGGYRPDQATWSVVISVCASLAALGCGRMVHICT 404
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
+KT FE + V +SL+ MYS+CG I +A F I + W A++ Y++HGL +EA+
Sbjct: 405 IKTGFEHDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAEAL 464
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDL 543
LF+ M + P+ ATF+ VLSAC G + EG FRSM + + +VP +HY+C+VDL
Sbjct: 465 ALFDRMTKDRFSPDHATFLSVLSACAHKGYLYEGCHYFRSMQQDWNLVPRSDHYSCMVDL 524
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
LGRSG +H+A F + +P L W L S+C ++++GE A+ + Y
Sbjct: 525 LGRSGFVHQAYNFTRKIPSNLQINAWETLFSSCNAHGDIQLGELVAKNVLQSRPSDGGMY 584
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
+LSNIYA G W +R + +KK+ GCSWIEL V +FS D +P I
Sbjct: 585 TLLSNIYAAKGMWSSAATVRGLMKEQGLKKETGCSWIELKGDVVSFSSNDNAHPLIEQIC 644
Query: 664 ATLEHLT 670
+++L+
Sbjct: 645 QEVDNLS 651
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 124/544 (22%), Positives = 219/544 (40%), Gaps = 124/544 (22%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+E + + N ++ RNG L AR +FD MP R VSW +L GY++ + E+ L
Sbjct: 63 RERNVFTWNCMVSGLARNGLLADARGVFDAMPSRNSVSWAALLTGYARRGRVAEARDLFD 122
Query: 74 TM-HRSNVKLNETTFSTILS-VCAQLNSLIDG----KQIHCLVLKSGY----------EC 117
M HR+ V N + + + + L D + L++ SGY E
Sbjct: 123 RMPHRNVVSWNAMVSGYLRNGMVDRARELFDAMPARDDVSWLMMVSGYMRRKRFREAREI 182
Query: 118 FEFVGS--------GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
F+ S LL YA +++A+ +F + + + W+ M+ GY + +M A
Sbjct: 183 FDRAPSPPPTSVCNALLSGYAGYGYLKDAEELFGRMQRPDRVSWNAMITGYTRAGMMQVA 242
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+F +MP KD V WT ++ GY ++ D + A ++F ++MP+
Sbjct: 243 RRLFDEMPGKDTVSWTAIVRGYLQNGD-VDAAWEVF-------QDMPDRDV--------- 285
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
++ +GG ++ + D A+R++ + + L + N+
Sbjct: 286 -------------------LAWNTMMGGFVVS-----DRLDDALRLFADMPDRDLVSWNT 321
Query: 290 LINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFE---------- 339
++ G I G ++ A F + E + S+N++I GY G + +
Sbjct: 322 ILQGYIQQGDMDSATTWFRSMLEKDETSWNTVISGYKDEGALSLLSEMTRGGYRPDQATW 381
Query: 340 ----------------KMPH---------------RSIISLNTMISVIPE--------ME 360
+M H S+IS+ + +I E ++
Sbjct: 382 SVVISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLITEASQVFDLIVQ 441
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
R+ VTWN+MI+ Y + L +AL L+ M K +TF + AC+ G L +G
Sbjct: 442 RDTVTWNAMIATYAYHGLAAEALALFDRMTKDRFSPDHATFLSVLSACAHKGYLYEG--- 498
Query: 421 HAHLVKTPFESNVYVGTS-----LVDMYSRCGSINDAQASFSSISSP-NVAAWTALMNGY 474
H ++ + V S +VD+ R G ++ A I S + AW L +
Sbjct: 499 -CHYFRSMQQDWNLVPRSDHYSCMVDLLGRSGFVHQAYNFTRKIPSNLQINAWETLFSSC 557
Query: 475 SHHG 478
+ HG
Sbjct: 558 NAHG 561
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES 68
+T + L++S+ I+ + G + A +FD + R V+WN M+ Y+ E+
Sbjct: 406 KTGFEHDALVMSS--LISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAEA 463
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
L+L M + + TF ++LS CA L +G
Sbjct: 464 LALFDRMTKDRFSPDHATFLSVLSACAHKGYLYEG 498
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 194/637 (30%), Positives = 305/637 (47%), Gaps = 119/637 (18%)
Query: 40 LFDQMPIRTVVSWNTMLCGY----SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+FD+MP++ VVSWNT++CG K+A M + N T + +L
Sbjct: 130 MFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASI 189
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+LN + +Q+HC +LKSG++ FVGS L+ YA ++EA+ FDE+
Sbjct: 190 ELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEV---------- 239
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA-KSVDGCEKALKLFRWMRESGEN 214
+D+V+W ++S YA V G KA +F+ MR G
Sbjct: 240 ---------------------SSRDLVLWNVMVSCYALNGVQG--KAFGVFKLMRLEGVK 276
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
N +TF S+I +C LG+ GK VHGL+I+ F+ D + AL++
Sbjct: 277 GDN-FTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVD------------- 322
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
+Y + EN IEDA F+ + N +S+ +MI GY +G ++
Sbjct: 323 MYSKNEN------------------IEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEA 364
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
RL ++M +++Y +LA+
Sbjct: 365 MRLLQEM-----------------------------------------IRVYTYPDELAL 383
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ + +C L + + +HA++V+ FE+ + + +LV YS+CGSI A
Sbjct: 384 -------ASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQ 436
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
SFSS++ P++ +WT+LM Y+ HGL E V +FE ML ++ P+ F+GVLSAC G
Sbjct: 437 SFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGF 496
Query: 515 VNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V EG+ F M Y ++P EHYTC++DLLGR+G L EA + MP+E + GA L
Sbjct: 497 VLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFL 556
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
AC N+ + A++K+F ++ + Y ++SN+YA +G W +RK + K
Sbjct: 557 GACKVHRNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFK 616
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
PGCSW+E+ VH F D+ +P +Y L+ L
Sbjct: 617 VPGCSWMEIAGEVHTFVSRDKTHPRAVQVYGMLDLLV 653
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 131/310 (42%), Gaps = 64/310 (20%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A++ FD++ R +V WN M+ Y+ ++ + M VK + TF++++
Sbjct: 227 GLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMI 286
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ C L S GKQ+H L+++ ++ V S L+ Y+ IE+A++ FD + N +
Sbjct: 287 NSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIV 346
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+VGY Q DG ++A++L + M
Sbjct: 347 SWTTMIVGYGQHG-------------------------------DG-KEAMRLLQEMIRV 374
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E S++ +C L A E VH +++ GFE SI AL+ Y C
Sbjct: 375 -YTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKC----- 428
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
G I A F+ + E + IS+ S++ YA +G
Sbjct: 429 --------------------------GSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLS 462
Query: 332 DDSKRLFEKM 341
+ +FEKM
Sbjct: 463 KEGVEVFEKM 472
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+N + AR FD M ++ +VSW TM+ GY + E++ L+ M R +E ++
Sbjct: 326 KNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALAS 385
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
ILS C L++ + Q+H V+++G+E F + + L+ Y+ C I A + F + E +
Sbjct: 386 ILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPD 445
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ W+ ++ Y L + +VF KM + D V + ++S A E L F
Sbjct: 446 IISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLE-GLHYF 504
Query: 206 RWMRESGENMPNEYTFDSVIRACARLG 232
M + MP+ + +I R G
Sbjct: 505 NLMINVYQIMPDSEHYTCIIDLLGRAG 531
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 143/286 (50%), Gaps = 25/286 (8%)
Query: 293 GLISMGRIEDAELIFNRLTEANSISY-NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
G + G+ A +I +L N +S N ++ Y + +D ++F++MP ++++S
Sbjct: 87 GFLHGGKQLHAHVI--KLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVS--- 141
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQL-YMTMRKLAIDRTRS---TFSVLFHA 407
WN++I G V+ N ++L + R++ ++ T + L A
Sbjct: 142 --------------WNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRA 187
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
L + + LH ++K+ F+SN +VG++LVD Y++ G +++AQ++F +SS ++ W
Sbjct: 188 SIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLW 247
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
+++ Y+ +G+ +A +F++M + + + TF ++++C G G ++ +
Sbjct: 248 NVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIR 307
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ + +VD+ ++ ++ +A + M ++ + V W ++
Sbjct: 308 LSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVK-NIVSWTTMI 352
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 5/168 (2%)
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
LG L G+ LHAH++K + + + ++ +Y +C ND F + NV +W L
Sbjct: 86 LGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTL 145
Query: 471 MNGYSHHGLGSEAVLL----FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
+ G V L F M+ + + PN T G+L A + V ++ +
Sbjct: 146 ICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFIL 205
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
G + +VD + G + EA+ ++ D V+W ++S
Sbjct: 206 KSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVS-SRDLVLWNVMVS 252
>gi|30686506|ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g19720; AltName: Full=Protein DYW7
gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein [Arabidopsis thaliana]
gi|332191770|gb|AEE29891.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 894
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 198/703 (28%), Positives = 343/703 (48%), Gaps = 57/703 (8%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS 70
L T+ + V T K ++ + G + AR +FD M R + +W+ M+ YS+ ++ E
Sbjct: 109 LFTEPDVFVET-KLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAK 167
Query: 71 LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
L M + V ++ F IL CA + GK IH +V+K G V + +L YA
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV----VVWTK 186
C E++ A + F + E + + W+ +L+ Y Q +A ++ +M K+ + V W
Sbjct: 228 KCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNI 287
Query: 187 LISGYAKSVDGCEKALKL-------------FRW-----------MRESGENM------- 215
LI GY + + C+ A+ L F W MR +M
Sbjct: 288 LIGGYNQ-LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 216 ---PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
PN T S + AC+ L +G VH + +K GF D +G +L++ Y C + A
Sbjct: 347 GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA 406
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIKGYAVY 328
+V+D ++N + NS+I G G A +F R+ +AN I++N+MI GY
Sbjct: 407 RKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKN 466
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G ++ LF++M +++RN TWN +I+GY+QN ++AL+L+
Sbjct: 467 GDEGEAMDLFQRMEKDG------------KVQRNTATWNLIIAGYIQNGKKDEALELFRK 514
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M+ T L AC+ L + + +H +++ ++ V +L D Y++ G
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
I ++ F + + ++ W +L+ GY HG A+ LF M Q I PN T ++ A
Sbjct: 575 IEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
Query: 509 CVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
G V+EG K+F S+ + Y ++P LEH + +V L GR+ L EA +FI++M I+ +
Sbjct: 635 HGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
+W + L+ C ++++ AA+ +F L+ + + I+S IYA+ K G+ ++ K
Sbjct: 695 IWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRR 754
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
+KK G SWIE+ + +H F+ D++ +V+Y +E ++
Sbjct: 755 DNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMS 797
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 9/241 (3%)
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
RST+ L +C GS+ G++LHA E +V+V T L+ MY++CG I DA+ F
Sbjct: 81 RSTYLKLLESCIDSGSIHLGRILHARF-GLFTEPDVFVETKLLSMYAKCGCIADARKVFD 139
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
S+ N+ W+A++ YS E LF +M++ ++P+ F +L C G V
Sbjct: 140 SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
G I + G+ L ++ + + G L A +F + M E D + W ++L A
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR-ERDVIAWNSVLLA-- 256
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNI----YAVLGKWGKKMDIRKRLTHLEVKK 633
+ E A + + ++K+ IS ++ NI Y LGK MD+ +++ +
Sbjct: 257 -YCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA 315
Query: 634 D 634
D
Sbjct: 316 D 316
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 187/632 (29%), Positives = 316/632 (50%), Gaps = 24/632 (3%)
Query: 47 RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
+ V WN + ++ ++DE++++ M V + T + +L C + +L +G+ +
Sbjct: 119 KDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAV 178
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H LK + V L YA ++ A RV D + + + W+ ++ + L+
Sbjct: 179 HAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLV 238
Query: 167 SDAFDVFIKM----PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
DA ++ +M P+ +V W ++SG ++ E AL + M + G P+ T
Sbjct: 239 DDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDRE-ALGVVASMLKQGLR-PDATTVS 296
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
S++++ A G G +H ++ E D G AL++ Y C D A +V D LE+
Sbjct: 297 SLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHR 356
Query: 283 CLNASNSLINGLISMGR----IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLF 338
L NSL+ G + GR +E EL+ + + ++N +I GY++ GQ + L
Sbjct: 357 NLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLL 416
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
++ V P N V+W S+ISG N +E + M+K + +
Sbjct: 417 RQI---------KAAGVTP----NVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSL 463
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
T SVL AC+ L ++G+ LH ++ ++ ++ V T+L+DMYS+ GS+ A+ F S
Sbjct: 464 VTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFES 523
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
I N+ A++ G + HG G EA+ LF M + P++ TF +L+AC GLV EG
Sbjct: 524 IQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEG 583
Query: 519 MKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
+ F SM++ YGV PT E+Y C+VDLL R G+L EA +FI+ PI+ A WGALL+ C
Sbjct: 584 WEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCS 643
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
N+ + E AA+ +F L+ + Y+++ N+Y + + ++ + V PG
Sbjct: 644 IHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGW 703
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
SWI++ +H F V+ + +P IY L L
Sbjct: 704 SWIQIEQGIHVFEVDGKPHPETAEIYEELIRL 735
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 202/506 (39%), Gaps = 126/506 (24%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQM----PIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+V N + C R G + A L +M P V +WNT+L G S+ + E+L +V+
Sbjct: 222 VVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVA 281
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+M + ++ + TT S++L A L G +IHC L++ E + G+ L+ YA C
Sbjct: 282 SMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCG 341
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK----KDVVVWTKLIS 189
++ A++V D L N W+ ++ GY A ++ M K D+ W LI+
Sbjct: 342 RLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLIT 401
Query: 190 GYAKSVDG-CEKALKLFRWMRESGEN---------------------------------- 214
GY S++G +A+ L R ++ +G
Sbjct: 402 GY--SMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGV 459
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P+ T ++RACA L +GK +H ++ ++ D + ALI+ Y
Sbjct: 460 QPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMY----------- 508
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
+ SL++ A++IF + + N + N+M+ G AV+GQ ++
Sbjct: 509 ----------SKGGSLVS----------AKVIFESIQQKNLVLCNAMLTGLAVHGQGREA 548
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
LF M WN SG +++
Sbjct: 549 IELFHDM------------------------WN---SGLKPDSI---------------- 565
Query: 395 DRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
TF+ L AC +G + +G + + K + +VD+ +RCG +++A
Sbjct: 566 -----TFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAM 620
Query: 454 ASFS-SISSPNVAAWTALMNGYSHHG 478
S P + W AL+ G S HG
Sbjct: 621 DFIERSPIDPGASHWGALLTGCSIHG 646
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 17 LIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
++VST I + G LV+A+ +F+ + + +V N ML G + + E++ L M
Sbjct: 498 MVVST-ALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMW 556
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDG 103
S +K + TF+ +L+ C + + +G
Sbjct: 557 NSGLKPDSITFTALLTACRSMGLVTEG 583
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 285/548 (52%), Gaps = 44/548 (8%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
YV+C + A VF MP ++ V L+SGYA S AL L R + NEY
Sbjct: 60 YVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASS-GRHRDALALLR----VADFGLNEY 114
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
S + A A + ++ G+ HG IK G + A++ YC C D A++V+D +
Sbjct: 115 VLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNV 174
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISY----------NSMIKGY 325
+ + A NS+ING + G+++ + I + + + +SY ++ G
Sbjct: 175 SSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGS 234
Query: 326 AVYGQVDDSKRLFE----------------KMPHRSIISLNTMISVIPEMERNPVTWNSM 369
V+ Q KR E PH + N + V+P E+N V+W ++
Sbjct: 235 QVHTQA--LKRRLELNVYVGSALVDMYGKCDFPHEA----NRVFEVLP--EKNIVSWTAI 286
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
++ Y QN L E ALQL++ M + T++V ++C+ L +L+ G L A +KT
Sbjct: 287 MTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGH 346
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ V +L++MYS+ GS+ DA+ F S+ +V +W +++ GY+HHG EA+ F
Sbjct: 347 WGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHD 406
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR-SMKSYGVVPTLEHYTCVVDLLGRSG 548
ML + VP+ TF+GVLSAC + GLV+EG MK GV P EHYTC+V LL R G
Sbjct: 407 MLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVG 466
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L EAE FI+ I D V W +LLS+C + N +G R A+++F L K + YV+LSN
Sbjct: 467 RLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSN 526
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YA +W + +R+ + L V+K+PG SWI++ S VH F+ ED+ +P I L+
Sbjct: 527 MYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQE 586
Query: 669 LTANLNSV 676
L + +
Sbjct: 587 LIDKIKVI 594
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 122/570 (21%), Positives = 232/570 (40%), Gaps = 101/570 (17%)
Query: 5 ATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK 64
A ++ + +V N I + G+L AR +FD MP R VS N ++ GY+ +
Sbjct: 37 AVHARVVRAARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGR 96
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
++L+L+ ++ LNE S+ ++ A + S G+Q H +K+G +V S
Sbjct: 97 HRDALALLRV---ADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSA 153
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
+L Y C ++EA +VFD + N ++ M+ G++ M D ++ ++V W
Sbjct: 154 VLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQM-DGSTSIVRSMVRNVGQW 212
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
+ ++ +V+ CA G VH
Sbjct: 213 --------------------------------DHVSYVAVLGHCASTKEVVLGSQVHTQA 240
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
+K E + +G AL++ Y C+ A RV++ L + + +++ EDA
Sbjct: 241 LKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDAL 300
Query: 305 LIF----------NRLTEANSISY-----------------------------NSMIKGY 325
+F N T A +++ N+++ Y
Sbjct: 301 QLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMY 360
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
+ G V+D++R+F MP R ++S WNS+I GY + +A++
Sbjct: 361 SKSGSVEDARRVFLSMPCRDVVS-----------------WNSIIIGYAHHGRAREAMEA 403
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYS 444
+ M + TF + AC+ LG + +G L+ + + + T +V +
Sbjct: 404 FHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLC 463
Query: 445 RCGSINDAQASF-SSISSPNVAAWTALMNG---YSHHGLGSEAVLLFEIMLEQDIVPNAA 500
R G +++A+ S+ +V AW +L++ Y ++GLG + +D+
Sbjct: 464 RVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDV----G 519
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
T+V + + +A + +K+ R M+ GV
Sbjct: 520 TYVLLSNMYAKANRWDGVVKVRRLMRELGV 549
>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 199/667 (29%), Positives = 335/667 (50%), Gaps = 63/667 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A N+FD M R VV+WNT++ + K ++ +++ + M +V + TF + ++
Sbjct: 174 ALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSK 233
Query: 97 LNSLIDGKQIHCLVLKSG--YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
L K + + K G Y FV S + +++ ++ A+ VFD N +W+
Sbjct: 234 LGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWN 293
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN 214
M+V YVQ N +A DVFI +AL ES E
Sbjct: 294 TMIVAYVQNNCPVEAIDVFI-------------------------QAL-------ESEEG 321
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
+ ++ T SV+ A ++L + H +IK I A++ Y C D +++
Sbjct: 322 VCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLK 381
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQ 330
V+D++ + N++I+ + G E+A ++ + + +S++ +++ +
Sbjct: 382 VFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRN 441
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEM--------------------ERNPVTWNSMI 370
+ K+ + R I M S + +M +R+ TWN++I
Sbjct: 442 LYVGKQTHAYLIRRGI-QFEGMESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAII 500
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
+GY QN L+EKA+ L M + T + + ACS +GS+ + LH ++ E
Sbjct: 501 AGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLE 560
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
NVYVGTSL D YS+CG+I+ A+ F N +T +M Y HG+G A+ L++ M
Sbjct: 561 KNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSM 620
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGH 549
L I P+A TFV +LSAC +GLV+EG++IF SM K + + P++EHY CV D+LGR G
Sbjct: 621 LRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGR 680
Query: 550 LHEAEEFIKDMPIELDAV-VWGALLSACWFWMNMEVGERAAQKMF--GLDKKPISAYVIL 606
+ EA EF+K + + + + +WG+LL +C + E+G+ A+K+ G+DK+ +V+L
Sbjct: 681 VVEAYEFVKGLGEDANTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMGMDKRMAGYHVLL 740
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SNIYA G+W K +RK++ + K+ GCSW+E+ V+ F D +P + IY L
Sbjct: 741 SNIYAEEGEWEKVDRVRKQMKEKGLHKETGCSWVEIAGFVNCFVSRDEKHPQSSEIYYML 800
Query: 667 EHLTANL 673
+ LT ++
Sbjct: 801 DMLTLDM 807
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 160/595 (26%), Positives = 277/595 (46%), Gaps = 58/595 (9%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S +++ R GQ A +L D +P + V WN+++ G+ ++L L + M RSN
Sbjct: 51 SIRSRLSKLCREGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKM-RSN 109
Query: 80 VK---LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYEC----FEFVGSGLLFFYANC 132
+ TFS+ L CA ++ GK IH L+S V + LL YA+C
Sbjct: 110 SSCSTFDPYTFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASC 169
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV----VVWTKLI 188
+ E A VFD + N + W+ +++ +V+ N A + F M + V V + L
Sbjct: 170 -QHEYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLF 228
Query: 189 SGYAKSVDGCEKALKLFR-WMRESGENMPNE-YTFDSVIRACARLGAFCEGKVVHGLLIK 246
+K D + +K+F +MR+ G+ ++ + S I + +G ++V +
Sbjct: 229 PALSKLGDS--RTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLN 286
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN-SLINGLISMGRIEDAE- 304
E ++ A ++ C EA D ++ + E C + + S++ + + +I+ AE
Sbjct: 287 KNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQ 346
Query: 305 ---LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
+ L + I N+++ Y+ VD S ++F+KM +ER
Sbjct: 347 FHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKM-----------------LER 389
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ V+WN++IS +VQN E+AL L M+K T + L A S L +L G+ H
Sbjct: 390 DAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTH 449
Query: 422 AHLVK--TPFESNVYVGTSLVDMYSRCGSINDAQASFSS--ISSPNVAAWTALMNGYSHH 477
A+L++ FE + + L+DMY++ GSI A+ F S + A W A++ GY+ +
Sbjct: 450 AYLIRRGIQFEG---MESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQN 506
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
GL +A+LL + ML Q+++PNA T +L AC G M + R + + + LE
Sbjct: 507 GLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMG----SMGLARQLHGFSIRRFLEKN 562
Query: 538 ----TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
T + D + G + AE P E ++V + ++ C+ M G+RA
Sbjct: 563 VYVGTSLTDTYSKCGAISYAENVFLRTP-EKNSVTYTTMM-MCYGQHGM--GKRA 613
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 162/378 (42%), Gaps = 78/378 (20%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
+LI+ N + R + T+ +FD+M R VSWNT++ + + +E+L LV M
Sbjct: 358 SLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEM 417
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ ++ T + +LS + L +L GKQ H +++ G + FE + S L+ YA I
Sbjct: 418 QKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQ-FEGMESYLIDMYAKSGSI 476
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A+ +F++ N SD +D W +I+GY +
Sbjct: 477 RTAELLFEQ-------------------NCSSD----------RDQATWNAIIAGYTQ-- 505
Query: 196 DGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+G EKA+ L + M +PN T S++ AC+ +G+ + +HG I+ E +
Sbjct: 506 NGLNEKAILLLKQMLVQNV-IPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVY 564
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+G +L + Y C G I AE +F R E N
Sbjct: 565 VGTSLTDTYSKC-------------------------------GAISYAENVFLRTPEKN 593
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
S++Y +M+ Y +G + L++ M I + VT+ +++S
Sbjct: 594 SVTYTTMMMCYGQHGMGKRALTLYDSMLRSGI-------------RPDAVTFVAILSACN 640
Query: 375 QNNLHEKALQLYMTMRKL 392
+ L ++ LQ++ +M K+
Sbjct: 641 YSGLVDEGLQIFESMEKV 658
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 12/224 (5%)
Query: 29 GRNGQLVTARNLFDQ--MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
++G + TA LF+Q R +WN ++ GY++ ++++ L+ M NV N T
Sbjct: 471 AKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVT 530
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
++IL C+ + S+ +Q+H ++ E +VG+ L Y+ C I A+ VF
Sbjct: 531 LASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTP 590
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISG--YAKSVDGCEK 200
E N + ++ M++ Y Q + A ++ M + D V + ++S Y+ VD +
Sbjct: 591 EKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVD---E 647
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGL 243
L++F M + + P+ + V R+G E + V GL
Sbjct: 648 GLQIFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGL 691
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 199/634 (31%), Positives = 319/634 (50%), Gaps = 70/634 (11%)
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S ++L+ S L C ++ L KQIH +L++ F S ++ F A
Sbjct: 36 SQIQLHPCLLS--LEKCTTMSQL---KQIHAQMLRTCLFVDPFSASKIVAFCA------- 83
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
LH+ L ++ + VF ++P +I GY +
Sbjct: 84 -------LHDSGSLPYARL---------------VFNQIPNPTTFTCNSIIRGYTNK-NL 120
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+A+ ++ M G + P+ +TF S+ ++C G CEGK +H K GF D I
Sbjct: 121 PRQAILFYQLMMLQGLD-PDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQN 176
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEA 313
L+ Y C A +V+D++ N + + ++I +A +F R+ +
Sbjct: 177 TLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKP 236
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-------------- 359
N I+ +++ A ++ +K++ + + I + S + ++
Sbjct: 237 NEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLF 296
Query: 360 ----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
E+N WN MI+G+V+++ +E+AL L+ M+ + + T + L AC+ LG+L+
Sbjct: 297 NKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALE 356
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G+ LH ++ K E +V +GT+LVDMY++CGSI A F + +V WTAL+ G +
Sbjct: 357 LGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLA 416
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTL 534
G G +A+ LF M ++ P+A TFVGVL+AC AGLVNEG+ F SM + YG+ P++
Sbjct: 417 MCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSI 476
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY C+VD+LGR+G + EAE+ I++MP+ D V LLSAC N+ V ERAAQ++
Sbjct: 477 EHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIE 536
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
LD K YV+LSNIY+ + W +R+ + +KK PGCS IE+ VH F D
Sbjct: 537 LDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDV 596
Query: 655 NNPNCNVIYATLEHLTANLNSV--------VLFD 680
++P + IY TL+ + L S VLFD
Sbjct: 597 SHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFD 630
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 207/485 (42%), Gaps = 62/485 (12%)
Query: 20 STNKAITECG--RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
S +K + C +G L AR +F+Q+P T + N+++ GY+ +++ M
Sbjct: 74 SASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMML 133
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + TF ++ C L +GKQ+HC K G+ ++ + L+ Y+NC +
Sbjct: 134 QGLDPDRFTFPSLFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVS 190
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++VFD++ + + W+ M+ Y Q W D
Sbjct: 191 ARKVFDKMVNKSVVSWATMIGAYAQ---------------------W-----------DL 218
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+A+KLFR M E PNE T +V+ ACAR K VH + + G F +
Sbjct: 219 PHEAIKLFRRM-EIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTS 277
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEA 313
AL++ YC C + A +++++ L N +ING + E+A +FN + +
Sbjct: 278 ALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKG 337
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII-----------------SLNTMISVI 356
+ ++ S++ G ++ K L + I S+ + + V
Sbjct: 338 DKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF 397
Query: 357 PEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
EM E++ +TW ++I G KAL+L+ M+ + TF + ACS G +
Sbjct: 398 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 457
Query: 416 QG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG 473
+G ++ K + ++ +VDM R G I +A+ ++ +P+ L++
Sbjct: 458 EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSA 517
Query: 474 YSHHG 478
HG
Sbjct: 518 CRIHG 522
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/602 (29%), Positives = 307/602 (50%), Gaps = 58/602 (9%)
Query: 56 LCGYSKWAKFDESLSLVSTMH-RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG 114
LC +S+ F + S T + +SNV L + S +L +C + ID Q+H +++ G
Sbjct: 5 LCCFSR---FHTTTSFAKTTNPKSNVSL--YSISALLKLC---KTHIDLHQVHAHLIQKG 56
Query: 115 YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI 174
E F+ + + + I + VFD + + LW+
Sbjct: 57 LEQDSFLVTQFISASNSVAHISYSTSVFDRVLSPSTFLWN-------------------- 96
Query: 175 KMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAF 234
L+SGY + + R RE G P+ YTF S+++ CA G
Sbjct: 97 -----------SLVSGYCAKLQFVDIISLYVRMKREDGA--PDRYTFPSLLKVCASEGKM 143
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
EG +HG +++CG + D + +L+ Y D A +V+D + + + ++I G
Sbjct: 144 MEGMALHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGY 203
Query: 295 ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
S+G + +A+ +F+ + E N S+N++I GY G V +++ F++MP ++++S TMI
Sbjct: 204 SSIGNLVEAKRLFDLMPERNVASWNAIIGGYMKMGDVKSAEKAFDEMPEKNVVSFTTMID 263
Query: 355 VIPEM--------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+ ER+ + W+++ISGY QN +A++ ++ M + +
Sbjct: 264 GYAKAGDMLSARNLFQKAPERDIIAWSALISGYTQNGQPNEAVKTFLEMSSRNVKPDKFV 323
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFE-SNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+ L ACS LG+L + + ++ + + +V +L+DM ++CG++ A F +
Sbjct: 324 LTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKM 383
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
++ ++ ++M G S HG G +AV LFE ML +D+ P+ F +L+AC RAGLV+EG
Sbjct: 384 PKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTPDDVAFTVILTACSRAGLVDEGW 443
Query: 520 KIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
F M+ Y +VP+++HY C+VDLL RSG L EA E IK +P++ A WGALL AC
Sbjct: 444 HYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKL 503
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
+ + E+ E A ++ ++ + YV+LSNIYA +W +R ++ ++K PGCS
Sbjct: 504 YCDSELAEVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCS 563
Query: 639 WI 640
WI
Sbjct: 564 WI 565
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 211/483 (43%), Gaps = 40/483 (8%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+++A Q + Q++ +V+ + I+ + + ++FD++ + WN+++ GY
Sbjct: 47 QVHAHLIQKGLEQDSFLVT--QFISASNSVAHISYSTSVFDRVLSPSTFLWNSLVSGYCA 104
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
+F + +SL M R + + TF ++L VCA +++G +H +L+ G + +V
Sbjct: 105 KLQFVDIISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEGMALHGSILRCGVDEDIYV 164
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+ L+ Y I+ A++VFD + E N + W+ M+VGY + +A +F MP+++V
Sbjct: 165 TTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSIGNLVEAKRLFDLMPERNV 224
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
W +I GY K D + A K F M E N +F ++I A+ G +
Sbjct: 225 ASWNAIIGGYMKMGD-VKSAEKAFDEMPEK-----NVVSFTTMIDGYAKAGDMLSARN-- 276
Query: 242 GLLIKCGFEFDESIGGALIEFYC----GCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
L + E D ALI Y EA + + R P SL+ +
Sbjct: 277 --LFQKAPERDIIAWSALISGYTQNGQPNEAVKTFLEMSSRNVKPDKFVLTSLMLACSQL 334
Query: 298 GRIEDAELIFNRLTEAN-----SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
G ++ A+ + + T + + ++I A G ++ + LFEKMP R +IS
Sbjct: 335 GNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLIS---- 390
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
+ S++ G + ++A+ L+ M + F+V+ ACS G
Sbjct: 391 -------------YCSVMQGLSIHGHGDQAVSLFERMLGEDLTPDDVAFTVILTACSRAG 437
Query: 413 SLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTAL 470
+ +G K +V +VD+ SR G + +A S+ + AW AL
Sbjct: 438 LVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGAL 497
Query: 471 MNG 473
+
Sbjct: 498 LGA 500
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 195/656 (29%), Positives = 316/656 (48%), Gaps = 102/656 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ +N + E G++ AR LFD MP R VVSW M+ Y++ E+ L R
Sbjct: 41 VQDSNWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFD---R 97
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + N T++ +LS YA ++E
Sbjct: 98 PDARRNVVTWTALLS-----------------------------------GYARARRVDE 122
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ +F+ + E N + W+ ML Y + DA +F +MP +D W L+ G +S
Sbjct: 123 AEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGLVRS-GS 181
Query: 198 CEKALKLFRWMRESGENMP--NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
E+A K+F E MP + ++ ++I AR G
Sbjct: 182 LERARKMF-------ERMPVRDVMSWTTMISGLARNG----------------------- 211
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
+ D A ++D + + + N++I+G RIE+A +F ++ +
Sbjct: 212 ------------SVDDAWVLFDAMPERNVVSWNAMISGYARNHRIEEALDLFTKMPIRDV 259
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
S+N MI G+ + +++LF++MP R++I TW +M++GY+Q
Sbjct: 260 ASWNIMITGFIQNKDLKSARQLFDEMPKRNVI-----------------TWTTMMNGYLQ 302
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
E AL+L+ M I + TF ACS L +L +GQ +H + KTP + + +V
Sbjct: 303 CMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQVHQMICKTPSQFDTFV 362
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
++L+++Y++CG I A+ F ++ +W ++ Y+HHG G EA+ L++ M E
Sbjct: 363 ESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYKNMQENGY 422
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
PN AT+VG+LSAC AGLV+EG+KIF SM K +V EHYTC+VDL R+G L +A+
Sbjct: 423 KPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRAGRLEDAK 482
Query: 555 EFIKDMPIE-LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
I I+ + VW ALL C N +G+ AA+ + + Y +L NIYA
Sbjct: 483 RLISWFKIKPTSSTVWSALLGGCNSHGNESIGDLAAKHLLEAEPDNAGTYTLLCNIYASA 542
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
GKW + +IR + +KK PGCSWIE+ ++VH F D+++ ++I L+ +
Sbjct: 543 GKWKEAAEIRSEMNVRGLKKQPGCSWIEVANKVHVFVSRDKSHSESDLINDLLQDI 598
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 138/539 (25%), Positives = 226/539 (41%), Gaps = 112/539 (20%)
Query: 28 CG--RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
CG R+G L AR +F++MP+R V+SW TM+ G ++ D++ L M NV
Sbjct: 174 CGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERNV----- 228
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
N++I G YA IEEA +F ++
Sbjct: 229 ---------VSWNAMISG-------------------------YARNHRIEEALDLFTKM 254
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ W++M+ G++Q + A +F +MPK++V+ WT +++GY + + E ALKLF
Sbjct: 255 PIRDVASWNIMITGFIQNKDLKSARQLFDEMPKRNVITWTTMMNGYLQCMQS-EMALKLF 313
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M G PN+ TF + AC+ L A CEG+ VH ++ K +FD + L+ Y
Sbjct: 314 NCMLVQGIQ-PNQVTFLGSLDACSNLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAK 372
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
C G I A +F+ E + IS+N +I Y
Sbjct: 373 C-------------------------------GEIRLARNVFDFSMEKDLISWNGIIAAY 401
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
A +G ++ L++ M + N T+ ++S L ++ L++
Sbjct: 402 AHHGFGIEAMHLYKNMQENGY-------------KPNDATYVGLLSACSHAGLVDEGLKI 448
Query: 386 YMTMRKL-AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
+ +M K +I ++ L CS G L+ + L + P S V+ ++L+ +
Sbjct: 449 FESMVKDNSIVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVW--SALLGGCN 506
Query: 445 RCG--SINDAQASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI------ 495
G SI D A + P N +T L N Y+ G EA EI E ++
Sbjct: 507 SHGNESIGDLAAKHLLEAEPDNAGTYTLLCNIYASAGKWKEAA---EIRSEMNVRGLKKQ 563
Query: 496 -------VPNAA-TFVGVLSACVRAGLVNEGMK-IFRSMKSYGVVPTLEHYTCVVDLLG 545
V N FV + + L+N+ ++ I R M+ G VP +H V+L+G
Sbjct: 564 PGCSWIEVANKVHVFVSRDKSHSESDLINDLLQDIHRIMRMAGTVPR-DHMLIDVELVG 621
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 202/690 (29%), Positives = 325/690 (47%), Gaps = 91/690 (13%)
Query: 22 NKAITECGRNGQLVTARNLFD--QMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
N I G+ G L AR LFD M VSWN+++ + K E+LSL M
Sbjct: 184 NALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVG 243
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V N TF L + + G IH LKS + +V + L+ YA
Sbjct: 244 VASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYA--------- 294
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+C M DA VF M +D V W L+SG ++ +
Sbjct: 295 ----------------------KCGRMEDAERVFASMLCRDYVSWNTLLSGLVQN-ELYR 331
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
AL FR M+ S + P++ + ++I A R G GK VH I+ G + + IG L
Sbjct: 332 DALNYFRDMQNSAQK-PDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTL 390
Query: 260 IEFYCGC-------------------------------EAFDGAMRVYDRLENPCLNASN 288
I+ Y C E A+ ++ +++ ++
Sbjct: 391 IDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDP 450
Query: 289 SLI-------NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+I +GL S I + + A+ + N+++ Y G D ++R FE +
Sbjct: 451 MMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESI 510
Query: 342 PHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
+ I+S W SMI+ V N L +AL+L+ ++++ I
Sbjct: 511 RSKDIVS-----------------WTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAI 553
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
A + L SL++G+ +H L++ F + +SLVDMY+ CG++ +++ F S+
Sbjct: 554 ISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQ 613
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
++ WT+++N HG G+EA+ LF+ M +++++P+ TF+ +L AC +GL+ EG +
Sbjct: 614 RDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRF 673
Query: 522 FRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWM 580
F MK Y + P EHY C+VDLL RS L EA +F++ MPI+ + VW ALL AC
Sbjct: 674 FEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHS 733
Query: 581 NMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWI 640
N E+GE AA+++ D K Y ++SNI+A G+W ++R R+ +KK+PGCSWI
Sbjct: 734 NKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWI 793
Query: 641 ELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
E+++++H F D+++P + IY L T
Sbjct: 794 EVDNKIHTFMARDKSHPQTDDIYLKLAQFT 823
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/566 (23%), Positives = 249/566 (43%), Gaps = 55/566 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A +FD+M RT+ +WN M+ + K+ E++ L M V ++ TF ++L
Sbjct: 93 GSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVL 152
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C L G +IH + +K G+ F FV + L+ Y C ++ A+ +FD
Sbjct: 153 KACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDG------- 205
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
I M K+D V W +IS + C +AL LFR M+E
Sbjct: 206 ----------------------IMMEKEDTVSWNSIISAHVTE-GKCLEALSLFRRMQEV 242
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G N YTF + ++ G +HG +K D + ALI Y C +
Sbjct: 243 GV-ASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMED 301
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----NRLTEANSISYNSMIKGYAV 327
A RV+ + + N+L++GL+ DA F N + + +S ++I
Sbjct: 302 AERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGR 361
Query: 328 YGQVDDSKRLFEKMPHRSIIS----LNTMISVIPE--------------MERNPVTWNSM 369
G + + K + + S NT+I + + E++ ++W ++
Sbjct: 362 SGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTI 421
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
I+GY QN H +A+ L+ ++ +D + ACS L S + +H ++ K
Sbjct: 422 IAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL 481
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+++ + ++V++Y G + A+ +F SI S ++ +WT+++ H+GL EA+ LF
Sbjct: 482 -ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYS 540
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
+ + +I P++ + LSA + +G +I + G + +VD+ G
Sbjct: 541 LKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGT 600
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSA 575
+ + + + + D ++W ++++A
Sbjct: 601 VENSRKMFHSVK-QRDLILWTSMINA 625
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 135/560 (24%), Positives = 254/560 (45%), Gaps = 70/560 (12%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
+P++++ S NT+ G A +SL+L+ST + E S +L +C + +L G
Sbjct: 9 LPLKSI-SVNTLNKGTLNPAF--QSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKALPQG 65
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
+Q+H +LKS F + + LL Y C +++A +VFDE+ E W+ M+ +V
Sbjct: 66 QQLHARLLKSHLSAF--LATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSS 123
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+A +++ +M V ++D C TF S
Sbjct: 124 GKYLEAIELYKEMRVLGV------------AIDAC---------------------TFPS 150
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD--RLEN 281
V++AC LG G +HG+ +KCGF + ALI Y C GA ++D +E
Sbjct: 151 VLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEK 210
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIK----------GYAV 327
+ NS+I+ ++ G+ +A +F R+ E +N+ ++ + ++ G +
Sbjct: 211 EDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI 270
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQNNLH 379
+G S + ++I++ + + E R+ V+WN+++SG VQN L+
Sbjct: 271 HGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELY 330
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
AL + M+ A + + L A G+L G+ +HA+ ++ +SN+ +G +L
Sbjct: 331 RDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTL 390
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+DMY++C + +F + ++ +WT ++ GY+ + EA+ LF + + + +
Sbjct: 391 IDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDP 450
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH---YTCVVDLLGRSGHLHEAEEF 556
VL AC +GL + R + Y L +V++ G GH A
Sbjct: 451 MMIGSVLRAC--SGL--KSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRA 506
Query: 557 IKDMPIELDAVVWGALLSAC 576
+ + + D V W ++++ C
Sbjct: 507 FESIRSK-DIVSWTSMITCC 525
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
S++ + ++ N++ G + N ++L L T R S+L C + +
Sbjct: 4 SIVTPLPLKSISVNTLNKGTL--NPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKA 61
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L QGQ LHA L+K+ + ++ T L+ MY +CGS+ DA F ++ + W A+M
Sbjct: 62 LPQGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGA 119
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT 533
+ G EA+ L++ M + +A TF VL AC G G +I G
Sbjct: 120 FVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEF 179
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL-DAVVWGALLSA 575
+ ++ + G+ G L A + +E D V W +++SA
Sbjct: 180 VFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 37/223 (16%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I+ N + G G AR F+ + + +VSW +M+ E+L L ++ +
Sbjct: 484 IMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQ 543
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+N++ + + LS A L+SL GK+IH +++ G+ + S L+ YA C +E
Sbjct: 544 TNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVEN 603
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
++++F + + +D+++WT +I+ A + G
Sbjct: 604 SRKMFHSVKQ-------------------------------RDLILWTSMIN--ANGMHG 630
Query: 198 C-EKALKLFRWMRESGEN-MPNEYTFDSVIRACARLGAFCEGK 238
C +A+ LF+ M + EN +P+ TF +++ AC+ G EGK
Sbjct: 631 CGNEAIALFKKMTD--ENVIPDHITFLALLYACSHSGLMVEGK 671
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 193/621 (31%), Positives = 319/621 (51%), Gaps = 64/621 (10%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T S++L C++ +L G +H VLK+G + F+ + +L YA C A++VFDE
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDE- 63
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
M +K++V W+ +ISGY ++ + + A+ L+
Sbjct: 64 ------------------------------MFEKNLVSWSAMISGYDQAGEP-QMAIDLY 92
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M +PNEY F SVI ACA L A G+ +H +K G+E + +LI Y
Sbjct: 93 SQMFL----VPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMK 148
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI--------- 316
C A+ V+ P + N+LI G + ++E F + + I
Sbjct: 149 CNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGV 208
Query: 317 -----SYNSMIKGYAVYGQVDDSKRLFEKMPH--RSIISLNTMISVIPEMER-------- 361
+ ++ +G ++ Q K + P II++ + +++I E E+
Sbjct: 209 LGICTTTENLKRGAELHCQT--VKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEK 266
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLL 420
+ ++WN++I+ + H K L+++ M + R TF+ AC+ L S+ G+ +
Sbjct: 267 DVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQI 326
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HAHL++T ++ VG +LV+MY++CG I A FS + N+ +W ++ G+ +HGLG
Sbjct: 327 HAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLG 386
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTC 539
AV LFE M I P++ TF+G+L+AC AGLV++G F SM+ +YG+ P +EH++C
Sbjct: 387 ERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSC 446
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
++D+LGR+G L+EAEE+++ P D VV +LLSA ++ +GER A+ + L
Sbjct: 447 LIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVT 506
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNC 659
S YV+LSN+YA G W + RKRL +KK+PG S IE+N V F++ D +
Sbjct: 507 TSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRI 566
Query: 660 NVIYATLEHLTANLNSVVLFD 680
I L+ L+ + V L++
Sbjct: 567 KEIKGILKTLSWAVGEVTLYN 587
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 201/491 (40%), Gaps = 104/491 (21%)
Query: 5 ATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK 64
TQS M+ N + + G AR +FD+M + +VSW+ M+ GY + +
Sbjct: 33 GTQSDVFMS--------NHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGE 84
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
++ L S M + NE F++++S CA L+++ G++IH LK GYE FV +
Sbjct: 85 PQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNS 141
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
L+ Y C + +A VF E N + ++ ++ G+V+ +
Sbjct: 142 LISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQL------------------ 183
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
E+ L+ F+ MR+ G +P+ + F V+ C G +H
Sbjct: 184 --------------ERGLEFFKLMRQQGL-IPDRFAFMGVLGICTTTENLKRGAELHCQT 228
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI------------- 291
+K + IG +I Y A + + +E + + N+LI
Sbjct: 229 VKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGL 288
Query: 292 --------------------------NGLISM--GRIEDAELIFNRLTEANSISYNSMIK 323
GL SM G+ A L+ RL + + N+++
Sbjct: 289 RVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVG-NALVN 347
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
YA G + + +F KM H +++S WN++I+G+ + L E+A+
Sbjct: 348 MYAKCGCIGYAYDIFSKMVHHNLVS-----------------WNTIIAGFGNHGLGERAV 390
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDM 442
+L+ M I TF L AC+ G + +GQL + +T ++ + L+DM
Sbjct: 391 ELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDM 450
Query: 443 YSRCGSINDAQ 453
R G +N+A+
Sbjct: 451 LGRAGRLNEAE 461
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/475 (34%), Positives = 265/475 (55%), Gaps = 16/475 (3%)
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
+P++ +F ++R+CA G G+ H ++K GFE+D + L++FY A R
Sbjct: 7 LPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKR 66
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
V+ + + A+N++I+ L G +E+A +F+ +TE NS S+NSMI Y G ++ +
Sbjct: 67 VFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINSA 126
Query: 335 KRLFEKMPHRSIISLNTMI-------SVIPEME--------RNPVTWNSMISGYVQNNLH 379
+ +F+ P + ++S N +I ++ E RN VTWN+MIS YVQ
Sbjct: 127 RLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEF 186
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
A+ ++ M+ + T T L AC+ LG+L G+ +H ++ + +V +G +L
Sbjct: 187 GTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNAL 246
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+DMY +CG++ A F +S N+ W +++ G +G G EA+ F +M ++ I P+
Sbjct: 247 IDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDG 306
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
TFVG+LS C +GL++ G + F M YG+ P +EHY C+VDLLGR+G+L EA E I+
Sbjct: 307 VTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIR 366
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
MP++ +++V G+LL AC + ++GE+ Q++ LD YV LSN+YA L +W
Sbjct: 367 AMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDD 426
Query: 619 KMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
RK + V K PGCS IE+N+ VH F D ++P I A L+ + L
Sbjct: 427 VNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKEL 481
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 145/334 (43%), Gaps = 69/334 (20%)
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M R++V ++T+FS IL CA G+ HC ++K G+E + +GLL FYA +
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 135 -------------------------------IEEAKRVFDELHEDNELLWSLMLVGYVQC 163
+EEA+ +FD + E N W+ M+ Y +
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKL 120
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD-----------GCEK------------ 200
++ A +F P KDVV W +I GY KS G +
Sbjct: 121 GDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAY 180
Query: 201 --------ALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
A+ +F+ M+ EN+ P E T S++ ACA LGA G+ +HG + +
Sbjct: 181 VQCGEFGTAISMFQQMQS--ENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKI 238
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF---- 307
D +G ALI+ YC C A + A+ V+ L + NS+I GL GR E+A F
Sbjct: 239 DVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVME 298
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ + +++ ++ G + G + +R F +M
Sbjct: 299 KEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEM 332
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQM-PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
+VS N I ++ QLV A+ LF M R V+WNTM+ Y + +F ++S+ M
Sbjct: 138 VVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQ 197
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
NVK E T ++LS CA L +L G+ IH + + +G+ L+ Y C +E
Sbjct: 198 SENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALE 257
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYA 192
A VF L N W+ ++VG +A FI M K+ D V + ++SG +
Sbjct: 258 AAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCS 317
Query: 193 KS 194
S
Sbjct: 318 HS 319
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 192/634 (30%), Positives = 311/634 (49%), Gaps = 87/634 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-- 79
+K I+ ++G + A N+F ++P + + SWN +L Y+ + L L S++ SN
Sbjct: 42 SKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLISYTLHNMHTDLLKLFSSLVNSNST 101
Query: 80 -VKLNETTFSTILSVCAQL--NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
VK + T + L A L NS + K++H +L+ G E FV + L+ FY+ C E+
Sbjct: 102 DVKPDRFTVTCALKALASLFSNSGL-AKEVHSFILRRGLEYDIFVVNALITFYSRCDELV 160
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+ +FD + E + + W+ ML GY Q
Sbjct: 161 LARIMFDRMPERDIVSWNAMLAGYSQGG-------------------------------- 188
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
EK +LFR M S E PN T SV++ACA+ G VH + + + D S+
Sbjct: 189 SYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLW 248
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
A+I Y C G ++ A +F + E ++I
Sbjct: 249 NAVIGLYAKC-------------------------------GSLDYARELFEEMLEKDAI 277
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
+Y SMI GY V+G V+ + LF + E R P TWN++ISG VQN
Sbjct: 278 TYCSMISGYMVHGFVNQAMDLFREQ----------------ERPRLP-TWNAVISGLVQN 320
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
N E A+ ++ M+ T + + S +L+ G+ +H + ++ ++ N+YV
Sbjct: 321 NRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVA 380
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
T+++D Y++CG ++ AQ F I ++ AWT++++ Y+ HG + A+ LF ML I
Sbjct: 381 TAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQ 440
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P+ TF VL+AC +G ++E KIF + YG+ P +EHY C+V +L R+G L +A E
Sbjct: 441 PDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVE 500
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
FI MP+E A VWGALL+ ++E+G+ ++F ++ + YVI++N+Y+ G+
Sbjct: 501 FISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQSGR 560
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
W IR + + +KK PG SWIE + + F
Sbjct: 561 WKDADTIRDLMKEVRLKKIPGNSWIETSGGMQRF 594
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 213/446 (47%), Gaps = 29/446 (6%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E I N IT R +LV AR +FD+MP R +VSWN ML GYS+ +++ L
Sbjct: 140 EYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGGSYEKCKELFRV 199
Query: 75 MHRS-NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M S VK N T ++L CAQ N LI G ++H V +S + + + ++ YA C
Sbjct: 200 MLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCG 259
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++ A+ +F+E+ E + + + M+ GY+ ++ A D+F + + + W +ISG +
Sbjct: 260 SLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQ 319
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ + E A+ +FR M+ G PN T S++ + GK +HG I+ ++ +
Sbjct: 320 N-NRQEGAVDIFRAMQSHGCR-PNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNI 377
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLT- 311
+ A+I+ Y C GA V+D+++ L A S+I+ G A L + LT
Sbjct: 378 YVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTN 437
Query: 312 --EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT--WN 367
+ + +++ S++ A G++D++ ++F + +PE P+ +
Sbjct: 438 GIQPDQVTFTSVLAACAHSGELDEAWKIFNVL--------------LPEYGIQPLVEHYA 483
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
M+ + A++ + K+ ++ T + L + S G ++ G+ + L +
Sbjct: 484 CMVGVLSRAGKLSDAVEF---ISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEI 540
Query: 428 -PFESNVYVGTSLVDMYSRCGSINDA 452
P + YV + ++YS+ G DA
Sbjct: 541 EPENTGNYV--IMANLYSQSGRWKDA 564
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 137/284 (48%), Gaps = 24/284 (8%)
Query: 297 MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+G+ A L+ + + N + + +I Y+ G + D+ +F K+P ++I S
Sbjct: 21 VGKQLHARLVLSSVVPDNFLG-SKLISFYSKSGSIRDAYNVFGKIPRKNIFS-------- 71
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTM---RKLAIDRTRSTFSVLFHACSCLGS 413
WN+++ Y +N+H L+L+ ++ + R T + A + L S
Sbjct: 72 ---------WNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFS 122
Query: 414 LQQ-GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+ +H+ +++ E +++V +L+ YSRC + A+ F + ++ +W A++
Sbjct: 123 NSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLA 182
Query: 473 GYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
GYS G + LF +ML ++ PNA T V VL AC ++ + G+++ R + +
Sbjct: 183 GYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIK 242
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + V+ L + G L A E ++M +E DA+ + +++S
Sbjct: 243 MDVSLWNAVIGLYAKCGSLDYARELFEEM-LEKDAITYCSMISG 285
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
S + L C+ + G+ LHA LV + + ++G+ L+ YS+ GSI DA F
Sbjct: 4 SAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGK 63
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ---DIVPNAATFVGVLSACVRAGLV 515
I N+ +W AL+ Y+ H + ++ + LF ++ D+ P+ T L A + +
Sbjct: 64 IPRKNIFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKA-LASLFS 122
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLL----GRSGHLHEAEEFIKDMPIELDAVVWGA 571
N G+ + + S+ + LE+ VV+ L R L A MP E D V W A
Sbjct: 123 NSGLA--KEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMP-ERDIVSWNA 179
Query: 572 LLSA 575
+L+
Sbjct: 180 MLAG 183
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 196/673 (29%), Positives = 324/673 (48%), Gaps = 124/673 (18%)
Query: 59 YSKWAKFDESLSLVSTMHRS----NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG 114
Y+ +FD SL+L+ ++H S ++KL + S ILS+ NS
Sbjct: 14 YASAFEFDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNS--------------- 58
Query: 115 YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI 174
F+ + L+F YA C ++ VFD L N LW+ ++ G V+ L ++AF +F
Sbjct: 59 -----FLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGCVKNRLYNEAFQLFN 113
Query: 175 KMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAF 234
+M DV +P+++T ++ + + LGA
Sbjct: 114 QMCSSDV---------------------------------LPDDFTLSTLSKVSSELGAL 140
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
GK +HG I+ GF D + +++ YC C FD + +V+D + + N LI G
Sbjct: 141 FSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGY 200
Query: 295 ISMG----RIEDAELIFN-RLTEANSISY----------------------------NSM 321
G R E E + ++ E +Y N +
Sbjct: 201 AVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNEL 260
Query: 322 IKG--------------YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
+ G Y+ +V +R+F++M R++ S W
Sbjct: 261 VLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFS-----------------WT 303
Query: 368 SMISGYVQNNLHEKALQLYMTMRKL-AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+MI+GYV+N ++AL L+ M+ + ++ R + + ACS L G+ +H V+
Sbjct: 304 AMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVR 363
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVL 485
+ V + +L+DMYS+CGS++ A+ F S + +W+++++GY HG G EA+L
Sbjct: 364 KELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAIL 423
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVVPTLEHYTCVVDLL 544
L++ ML+ I P+ T VG+LSAC R+GLVNEG+ I+ S + YG+ PTLE C+VD+L
Sbjct: 424 LYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDML 483
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L A +FIK +P+E VWGAL+S ++E+ E A + + L+ K S YV
Sbjct: 484 GRAGQLDRALDFIKAIPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNYV 543
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+SN+YA +W ++R+ + ++K PGCSWI +N++ H F V D+ +P+ IY
Sbjct: 544 SISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSSTSIYN 603
Query: 665 TLEHLTANLNSVV 677
L+ L +N +
Sbjct: 604 MLDDLLLTMNDAI 616
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/526 (22%), Positives = 230/526 (43%), Gaps = 69/526 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
+R +FD + + V WN+++ G K ++E+ L + M S+V ++ T ST+ V ++
Sbjct: 77 SRLVFDSLQHKNVFLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSE 136
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L +L GK IH +++G+ V + ++ Y C +E+++VFDE+ N W+++
Sbjct: 137 LGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVL 196
Query: 157 LVGYV---QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ GY CN + ++ F+K + D E
Sbjct: 197 IAGYAVSGNCNFREETWE-FVKQMQMD--------------------------------E 223
Query: 214 NMPNEYTFDSVIRAC-ARLGAFCEGKVVHGLLIK----CGFEFDESIGGALIEFYCGCEA 268
P+ YT S++ C +G + G+ +H ++K G + D +G LI+ Y
Sbjct: 224 VRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNK 283
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-----TEANSISYNSM-- 321
RV+DR++ + + ++ING + G ++A +F + E N +S S+
Sbjct: 284 VVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLP 343
Query: 322 -------------IKGYAVYGQVDDSKRLFEKM--PHRSIISLNTMISVIPE--MERNPV 364
I G+AV ++++ L + + SL++ V + + ++ +
Sbjct: 344 ACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAI 403
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+W+SMISGY + ++A+ LY M + I T + AC G + +G +++ +
Sbjct: 404 SWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLNIYSSV 463
Query: 425 VKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG--LG 480
+ E + + +VDM R G ++ A +I P + W AL++ HG
Sbjct: 464 INDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSIIHGDLEM 523
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
E F I LE N + + ++ R V E ++ + +
Sbjct: 524 QELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAEVRRMMKDKR 569
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 147/335 (43%), Gaps = 46/335 (13%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-SNVKLNETTFS 88
R+ ++V R +FD+M R V SW M+ GY + DE+LSL M V+ N +
Sbjct: 280 RSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSLV 339
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++L C+ + L+ G+QIH ++ + + L+ Y+ C ++ A+RVF ED
Sbjct: 340 SVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVF----ED 395
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ L KD + W+ +ISGY G ++A+ L+ M
Sbjct: 396 DSLC--------------------------KDAISWSSMISGYGLHGKG-QEAILLYDKM 428
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK-CGFEFDESIGGALIEFYCGCE 267
++G P+ T ++ AC R G EG ++ +I G E I +++
Sbjct: 429 LQAGIR-PDMITTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAG 487
Query: 268 AFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRLTE------ANSISYNS 320
D A+ + P + +L++ I G +E EL + L + +N +S ++
Sbjct: 488 QLDRALDFIKAIPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISN 547
Query: 321 MIKGYAVYGQVDDSKRLFE-----KMPHRSIISLN 350
+ + V + +R+ + K+P S IS+N
Sbjct: 548 LYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISIN 582
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 196/699 (28%), Positives = 336/699 (48%), Gaps = 98/699 (14%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N ++ ++ L AR LF+ M R VSW M+ GYS+ + E+ +L + M RS
Sbjct: 79 SVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSG 138
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
VK + TF+T+LS +L + QIH +++ G+ V + L+ Y ++ A
Sbjct: 139 VKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIAS 198
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
++F E+ + + +++M+ GY + E
Sbjct: 199 QLFSEMPTKDSVSFNVMITGYTKYGFR--------------------------------E 226
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+ALKLF MR + + P+ +TF +++ G+ +HGL IK + +D + AL
Sbjct: 227 EALKLFMQMR-NMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANAL 285
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL--------- 310
++FY + D A ++D + + N +I G G+ E + +F RL
Sbjct: 286 LDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKN 345
Query: 311 ---------------------TEANSISY---------NSMIKGYAVYGQVDDSKRLFEK 340
T A ++ N+++ YA + +D+ R+F
Sbjct: 346 FPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFAN 405
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+ + RN V W ++IS YVQ HE+AL+++ M + + ++T
Sbjct: 406 LAY-----------------RNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQAT 448
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
F+ A + L S+ G+ LH+ +++ S+V+ G+ LVDMY+ CGS+ DA F +
Sbjct: 449 FASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP 508
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
N+ W AL++ YS +G F M+E + P++ +F+ VL+AC GLV + +
Sbjct: 509 DRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALW 568
Query: 521 IFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
F SM + Y + P +HY ++D+L RSG +EAE I +MP E D V+W ++L++C
Sbjct: 569 YFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIH 628
Query: 580 MNMEVGERAAQKMFGLDK-KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
N ++ ++AA ++F +D + +AYV +SNIYA GKW ++K + VKK S
Sbjct: 629 KNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYS 688
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSVV 677
W+E++ RVH F+ DR +P E + +NS+V
Sbjct: 689 WVEIDHRVHVFTANDRTHPQT-------EQIRRKINSLV 720
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 210/492 (42%), Gaps = 88/492 (17%)
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV----------------- 195
++ L V+ N ++ A +F +MP ++ ++SGY KS
Sbjct: 49 FNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNE 108
Query: 196 -------------DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
+ ++A L+ M SG P+ TF +++ E +H
Sbjct: 109 VSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK-PDHITFATLLSGFDDTTTLKEVLQIHS 167
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
+I+ GF + +L++ YC D A +++ + + N +I G G E+
Sbjct: 168 HIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREE 227
Query: 303 A------------------------------ELIFNRLTEANSI--SY-------NSMIK 323
A ++IF + +I SY N+++
Sbjct: 228 ALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLD 287
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
Y+ + +D +K LF++MP E + V++N +I+GY N +EK+
Sbjct: 288 FYSKHDYIDLAKNLFDEMP-----------------ELDGVSYNIIITGYAWNGQYEKSF 330
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
L+ ++ + DR F+ + + +L G+ HA V T S V VG +LVDMY
Sbjct: 331 DLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMY 390
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++C DA F++++ N WTA+++ Y G EA+ +F+ M +++ + ATF
Sbjct: 391 AKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFA 450
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
L A V+ G ++ S+ G++ ++ + +VD+ G + +A E K+MP +
Sbjct: 451 STLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP-D 509
Query: 564 LDAVVWGALLSA 575
+ V W AL+SA
Sbjct: 510 RNIVCWNALISA 521
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 141/319 (44%), Gaps = 22/319 (6%)
Query: 261 EFYCGCEAFDGAMRVYDRLE----NPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
FYCG + V R+ +P ++ N + L+ +I A +F+ + N+
Sbjct: 19 RFYCGFSERIVDIPVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTS 78
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
S N M+ GY + ++ LFE M RN V+W MI GY QN
Sbjct: 79 SVNMMVSGYVKSRNLFRARELFESM-----------------FSRNEVSWTIMIGGYSQN 121
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
N ++A LY M + + TF+ L +L++ +H+H+++ F +++ V
Sbjct: 122 NQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVF 181
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
SLVD Y + ++ A FS + + + ++ ++ GY+ +G EA+ LF M D
Sbjct: 182 NSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQ 241
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
P+ TF +L V + V G +I V + ++D + ++ A+
Sbjct: 242 PSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNL 301
Query: 557 IKDMPIELDAVVWGALLSA 575
+MP ELD V + +++
Sbjct: 302 FDEMP-ELDGVSYNIIITG 319
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 11/254 (4%)
Query: 6 TQSQTLMTQETLIVSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK 64
T +Q ++T V A+ + + + A +F + R V W ++ Y +
Sbjct: 367 THAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGF 426
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
+E+L + M+R NV ++ TF++ L A L S+ GKQ+H V++ G F GS
Sbjct: 427 HEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSV 486
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----D 180
L+ YANC +++A VF E+ + N + W+ ++ Y Q F F M + D
Sbjct: 487 LVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPD 546
Query: 181 VVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
V + +++ A S G EKAL F M + + P + ++I R G F E +
Sbjct: 547 SVSFLSVLT--ACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAE- 603
Query: 240 VHGLLIKCGFEFDE 253
L+ + FE DE
Sbjct: 604 --NLISEMPFEPDE 615
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 206/683 (30%), Positives = 320/683 (46%), Gaps = 126/683 (18%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
LFD M +R +VSWN M+ GY + ++L L M VK + T + CA+L S
Sbjct: 218 LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGS 277
Query: 100 LIDGKQIHCLVLKSGYECFEFVG-----SGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
L GKQIH L +K FEFV + LL Y+N +E + ++F+ +
Sbjct: 278 LKLGKQIHQLAIK-----FEFVEDLYILNALLNMYSNNGSLESSHQLFESV--------- 323
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGE 213
P +D +W +IS YA GC E+A+ LF M+ G
Sbjct: 324 ----------------------PNRDAPLWNSMISAYAAF--GCHEEAMDLFIRMQSEGV 359
Query: 214 NMPNEYTFDSVIRACARLGA-FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+E T ++ C L + +GK +H +IK G D S+G AL+ Y +
Sbjct: 360 K-KDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESV 418
Query: 273 MRVYDRLENPCLNASNSLINGLIS----------MGRIEDAELIFNRLT---------EA 313
+++DR++ + + N++I L R+ ++E+ N T +
Sbjct: 419 QKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDV 478
Query: 314 NSISYNSMIKGYAVYGQVD--------------------DSKRLFEKMPHRSIISLNTMI 353
+ + I GY + ++ ++ LFE P R +IS N MI
Sbjct: 479 TCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMI 538
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
+ E N VT +++S + L +
Sbjct: 539 X---KAEPNSVTIINVLSSFTH-----------------------------------LAT 560
Query: 414 LQQGQLLHAHLVKTPFES--NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
L QGQ LHA++ + F ++ + + + MY+RCGS+ A+ F ++ N+ +W A++
Sbjct: 561 LPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMI 620
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGV 530
GY +G GS+A+L F MLE PN TFV VLSAC +G + G+++F SM + + V
Sbjct: 621 AGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNV 680
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
P L HY+C+VDLL R G + EA EFI MPIE DA VW ALLS+C + + + + +
Sbjct: 681 TPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFE 740
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
K+ L+ YV+LSN+YA G W + IR L ++K PG SWI + ++VH FS
Sbjct: 741 KLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFS 800
Query: 651 VEDRNNPNCNVIYATLEHLTANL 673
DR++P + IYA L L +++
Sbjct: 801 AGDRSHPQSDKIYAKLSILLSSM 823
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/575 (24%), Positives = 246/575 (42%), Gaps = 92/575 (16%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD M R VV WN M+ GY W ++E++ LV M R N++ N T +L
Sbjct: 109 GFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALL 168
Query: 92 SVCAQLNSLIDGKQIHCLVLKSG-YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
C + L G+ +H L++G ++ V + L+ FY F++ +FD + N
Sbjct: 169 LACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLR-FDMRVLPLLFDLMVVRNI 227
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W+ M+ GY D D F KAL+LF M
Sbjct: 228 VSWNAMISGYY------DVGDYF--------------------------KALELFVQM-- 253
Query: 211 SGENMPNEYTFDSV-----IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
+ +E FD V ++ACA LG+ GK +H L IK F D I AL+ Y
Sbjct: 254 ----LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSN 309
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-------EANSISY 318
+ + + ++++ + N NS+I+ + G E+A +F R+ E +
Sbjct: 310 NGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIM 369
Query: 319 NSM--------IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER--------N 362
SM +KG +++ V S + +++S+ T ++ + +++ +
Sbjct: 370 LSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVD 429
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
++WN+MI +N L +A +L+ MR+ I T + AC + L G+ +H
Sbjct: 430 IISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHG 489
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+++K E N + T+L DMY CG A+ F ++ +W A++
Sbjct: 490 YVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIXKAE------- 542
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI--FRSMKSYGVVPTLEHYTCV 540
PN+ T + VLS+ + +G + + + + + + L
Sbjct: 543 --------------PNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAF 588
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + R G L AE K +P + + + W A+++
Sbjct: 589 ITMYARCGSLQSAENIFKTLP-KRNIISWNAMIAG 622
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 140/578 (24%), Positives = 244/578 (42%), Gaps = 105/578 (18%)
Query: 43 QMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLID 102
++ I+ WN+++ + LS + M V N TT +L CA N++
Sbjct: 19 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 78
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
GK IH + + VG+ ++ FY C G+V+
Sbjct: 79 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKC--------------------------GFVE 112
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENM-PNEYT 220
DA VF M +DVV+W ++ GY GC E+A+ L R M EN+ PN T
Sbjct: 113 -----DARCVFDAMSDRDVVLWNAMVYGYVGW--GCYEEAMLLVREMGR--ENLRPNSRT 163
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGALIEFYCGCEAFDGAMRV---- 275
+++ AC G+ VHG ++ G F+ + + ALI FY FD MRV
Sbjct: 164 MVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYL---RFD--MRVLPLL 218
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDA----------ELIFNRLT---------EANSI 316
+D + + + N++I+G +G A E+ F+ +T E S+
Sbjct: 219 FDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSL 278
Query: 317 S--------------------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
N+++ Y+ G ++ S +LFE +P+
Sbjct: 279 KLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPN------------- 325
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS-LQ 415
R+ WNSMIS Y HE+A+ L++ M+ + + T ++ C L S L
Sbjct: 326 ----RDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLL 381
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+G+ LHAH++K+ + +G +L+ MY+ + Q F + ++ +W ++ +
Sbjct: 382 KGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALA 441
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
+ L ++A LFE M E +I PN+ T + +L+AC ++ G I + + +
Sbjct: 442 RNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQP 501
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
T + D+ G A + + P + D + W A++
Sbjct: 502 LRTALADMYMNCGDEATARDLFEGCP-DRDLISWNAMI 538
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 134/523 (25%), Positives = 232/523 (44%), Gaps = 74/523 (14%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
NG L ++ LF+ +P R WN+M+ Y+ + +E++ L M VK +E T +
Sbjct: 310 NGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIM 369
Query: 91 LSVCAQLNS-LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
LS+C +L S L+ GK +H V+KSG +G+ LL Y +E +++FD
Sbjct: 370 LSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFD------ 423
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+M D++ W +I A++ + A +LF MR
Sbjct: 424 -------------------------RMKGVDIISWNTMILALARNTLRAQ-ACELFERMR 457
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY--CGCE 267
ES E PN YT S++ AC + G+ +HG ++K E ++ + AL + Y CG E
Sbjct: 458 ES-EIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDE 516
Query: 268 A-----FDGA----MRVYDRLENPCLNASNSLINGLISM--------GRIEDAELIFNRL 310
A F+G + ++ + S ++IN L S G+ A +
Sbjct: 517 ATARDLFEGCPDRDLISWNAMIXKAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGF 576
Query: 311 TEANSISY-NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ +S N+ I YA G + ++ +F+ +P R+IIS WN+M
Sbjct: 577 SLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIIS-----------------WNAM 619
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTP 428
I+GY N A+ + M + TF + ACS G ++ G QL H+ +
Sbjct: 620 IAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFN 679
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ + +VD+ +R G I++A+ S+ P+ + W AL++ + +A +F
Sbjct: 680 VTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIF 739
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
E + + + + NA +V + + AGL E +I +K G+
Sbjct: 740 EKLDKLEPM-NAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGL 781
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 118/257 (45%), Gaps = 20/257 (7%)
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
+++ Y G V+D++ +F+ M R + V WN+M+ GYV +
Sbjct: 100 AVVDFYCKCGFVEDARCVFDAMSDRDV-----------------VLWNAMVYGYVGWGCY 142
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP-FESNVYVGTS 438
E+A+ L M + + T L AC L+ G+ +H + ++ F+SN +V T+
Sbjct: 143 EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATA 202
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+ Y R + F + N+ +W A+++GY G +A+ LF ML ++ +
Sbjct: 203 LIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFD 261
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
T + + AC G + G +I + + V L ++++ +G L + + +
Sbjct: 262 CVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFE 321
Query: 559 DMPIELDAVVWGALLSA 575
+P DA +W +++SA
Sbjct: 322 SVP-NRDAPLWNSMISA 337
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N IT R G L +A N+F +P R ++SWN M+ GY + +++ S M
Sbjct: 585 ANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGF 644
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG-SGLLFFYANCFEIEEAK 139
+ N TF ++LS C+ + G Q+ +++ E V S ++ A I+EA+
Sbjct: 645 RPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAR 704
Query: 140 RVFDELH-EDNELLWSLMLVGYVQCNLMSDA------FDVFIKMPKKDVVVWTKLISGYA 192
D + E + +W +L C SDA F+ K+ + + L + YA
Sbjct: 705 EFIDSMPIEPDASVWRALL---SSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYA 761
Query: 193 KSVDGCEKALKLFR-WMRESGENMP 216
+ G ++ R W++E G P
Sbjct: 762 TA--GLWLEVRRIRTWLKEKGLRKP 784
>gi|345505230|gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
Length = 614
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/531 (34%), Positives = 283/531 (53%), Gaps = 66/531 (12%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
KD +W +I ++ VD +AL F M E+G ++ ++++F V++AC+RLG G
Sbjct: 85 KDPFLWNLVIKSHSHGVDP-RRALLWFCLMLENGISV-DKFSFSLVLKACSRLGFLKGGM 142
Query: 239 VVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
+HG L K G D + LI Y CGC F A +++DR+ + NS+I+G I
Sbjct: 143 QIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGF--ARQIFDRMPQRDSVSYNSMIDGYIK 200
Query: 297 MGRIEDAELIFN----------------------------------RLTEANSISYNSMI 322
G IE A +F+ + E + IS+NS+I
Sbjct: 201 CGLIESARELFDLMPREMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLI 260
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNS 368
GY +G+++D+K LF MP R +++ TMI ++ R+ V +NS
Sbjct: 261 YGYVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNS 320
Query: 369 MISGYVQNNLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
M++GYVQN H +AL+++ M K L D T T ++ A + LG L + +H ++V
Sbjct: 321 MMAGYVQNRHHMEALEIFSDMEKESHLTPDET--TLVIVLSAIAQLGQLSKAMDMHLYIV 378
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ F +G +L+DMYS+CGSI A F I + ++ W A++ G + HGLG A
Sbjct: 379 EKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGIENKSIDHWNAMIGGLAIHGLGESA-- 436
Query: 486 LFEIMLE---QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVV 541
F I+LE + I P+ TFVGVL+AC +GLV EG+ F M + + + P L+HY C+V
Sbjct: 437 -FNILLEIERRSIEPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 495
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
DLL R G + A+ I++MPIE + V+W L+AC E+GE A+ + S
Sbjct: 496 DLLSRCGSIELAKNLIEEMPIEPNDVIWRTFLTACNHHKEFEIGELVAKHLILQAGYNPS 555
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
+YV+LSN+YA G+W ++R + +++K PGCSWIEL+ RVH F V+
Sbjct: 556 SYVLLSNMYASFGRWKDVRNVRTMMKERKLQKVPGCSWIELDGRVHEFFVD 606
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 195/427 (45%), Gaps = 28/427 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+MP R VS+N+M+ GY K + + L M R L ++++++
Sbjct: 171 GCLGFARQIFDRMPQRDSVSYNSMIDGYIKCGLIESARELFDLMPREMKNL--ISWNSMI 228
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S AQ + DG I + E + L++ Y +E+AK +F + + +
Sbjct: 229 SGYAQTS---DGVNIASKLFAEMPEKDLISWNSLIYGYVKHGRMEDAKDLFHVMPRRDVV 285
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY + + A +F +MP +DVV + +++GY ++ E AL++F M +
Sbjct: 286 TWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNRHHME-ALEIFSDMEKE 344
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T V+ A A+LG + +H +++ F +G ALI+ Y C +
Sbjct: 345 SHLTPDETTLVIVLSAIAQLGQLSKAMDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQQ 404
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----NRLTEANSISYNSMIKGYAV 327
AM V++ +EN ++ N++I GL G E A I R E + I++ ++ +
Sbjct: 405 AMCVFEGIENKSIDHWNAMIGGLAIHGLGESAFNILLEIERRSIEPDYITFVGVLNACSH 464
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V + FE M + I P ++ + M+ + E A L
Sbjct: 465 SGLVKEGLLCFELMRRKHKIE--------PRLQH----YGCMVDLLSRCGSIELAKNL-- 510
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRC 446
+ ++ I+ + AC+ + G+L+ HL+ + + + YV L +MY+
Sbjct: 511 -IEEMPIEPNDVIWRTFLTACNHHKEFEIGELVAKHLILQAGYNPSSYV--LLSNMYASF 567
Query: 447 GSINDAQ 453
G D +
Sbjct: 568 GRWKDVR 574
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 12/304 (3%)
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD 332
M V+ PC + +S+I + S D I RL I +++ V
Sbjct: 1 MLVFANSHQPC--SISSIIQLVGSCKNSNDVGKIHARLITTGFIKNSNLTTKIVV--AFA 56
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
DS+R + R + + S P ++P WN +I + +AL + M +
Sbjct: 57 DSRRPYLAEFARYVFREYHVCSFAPGDVKDPFLWNLVIKSHSHGVDPRRALLWFCLMLEN 116
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
I + +FS++ ACS LG L+ G +H L KT S++++ L+ +Y +CG + A
Sbjct: 117 GISVDKFSFSLVLKACSRLGFLKGGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFA 176
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR- 511
+ F + + ++ ++++GY GL A LF++M + + N ++ ++S +
Sbjct: 177 RQIFDRMPQRDSVSYNSMIDGYIKCGLIESARELFDLMPRE--MKNLISWNSMISGYAQT 234
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
+ VN K+F M ++ + ++ + G + +A++ MP D V W
Sbjct: 235 SDGVNIASKLFAEMPEKDLIS----WNSLIYGYVKHGRMEDAKDLFHVMP-RRDVVTWAT 289
Query: 572 LLSA 575
++
Sbjct: 290 MIDG 293
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 37/255 (14%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW-----AK--FD- 66
E ++S N I ++G++ A++LF MP R VV+W TM+ GY+K AK FD
Sbjct: 250 EKDLISWNSLIYGYVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQ 309
Query: 67 -----------------------ESLSLVSTMHR-SNVKLNETTFSTILSVCAQLNSLID 102
E+L + S M + S++ +ETT +LS AQL L
Sbjct: 310 MPHRDVVAYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVLSAIAQLGQLSK 369
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
+H +++ + +G L+ Y+ C I++A VF+ + + W+ M+ G
Sbjct: 370 AMDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGIENKSIDHWNAMIGGLAI 429
Query: 163 CNLMSDAFDVFIKMPKK----DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
L AF++ +++ ++ D + + +++ + S ++ L F MR + P
Sbjct: 430 HGLGESAFNILLEIERRSIEPDYITFVGVLNACSHS-GLVKEGLLCFELMRRKHKIEPRL 488
Query: 219 YTFDSVIRACARLGA 233
+ ++ +R G+
Sbjct: 489 QHYGCMVDLLSRCGS 503
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/589 (31%), Positives = 289/589 (49%), Gaps = 83/589 (14%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T + + CA + +G Q+H +K G+ ++ + L+ Y+ C + A+RVFD
Sbjct: 108 THPLLAAACAARGDVREGLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRVFDAG 167
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK-------------------------- 179
+ + W+ +L YV+ + A VF +MP++
Sbjct: 168 PVWDAVSWNTILATYVRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFD 227
Query: 180 -----DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAF 234
D WT ++S + ++ D +AL +F MRE G + +E SV+ ACA+ G
Sbjct: 228 GAEHRDAFTWTAMVSCFERN-DLFMEALAVFSDMREEGWPV-DEAVMVSVVAACAKSGVI 285
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
G+V HGL+++ G ++ LI Y C+ A R++D E+
Sbjct: 286 QNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGES------------- 332
Query: 295 ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
+ S+NSMI GY G+V+D+K LF+ MP
Sbjct: 333 ------------------LDHFSWNSMISGYLKNGRVEDAKALFDVMP------------ 362
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
+++ V+W++MI+G V NN +AL ++ +MR I T + ACS L +L
Sbjct: 363 -----DKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSAL 417
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+QG+L+H ++ K + + +GTSL+DMY +CG + A F + W A++ G
Sbjct: 418 EQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCWNAVIVGL 477
Query: 475 SHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVP 532
+ +GL + ++ +F E+ VPN TF GVLSAC GLV EG + F+ M++ Y +VP
Sbjct: 478 AMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIVP 537
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+ HY C+VDLLGR+G++ EAE+ I+ MP+ D WGALL ACW + EVGER +K+
Sbjct: 538 NIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALLGACWKHGDSEVGERVGKKL 597
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
LD +LSNIYA G W D+R + V K GCS +E
Sbjct: 598 VKLDPDHDGFQTMLSNIYASEGMWQCVKDLRGSMKQQHVAKVAGCSMVE 646
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 164/327 (50%), Gaps = 7/327 (2%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
R G + AR +FD R +W M+ + + F E+L++ S M ++E
Sbjct: 214 ARRGMVEEARGVFDGAEHRDAFTWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVMV 273
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++++ CA+ + +G+ H LV+++G V + L+ Y++C ++ A+R+FD
Sbjct: 274 SVVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESL 333
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ W+ M+ GY++ + DA +F MP KD V W+ +I+G + E AL +F M
Sbjct: 334 DHFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSE-ALNVFDSM 392
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
R + E P++ T SVI AC+ L A +GK+VH + K + +G +LI+ Y C
Sbjct: 393 R-AHEIKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGC 451
Query: 269 FDGAMRVYDRLE---NPCLNA--SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIK 323
+ A+ V+D LE PC NA +NGL++ +E+ N I++ ++
Sbjct: 452 MEAALEVFDMLEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLS 511
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLN 350
G V++ ++ F+ M ++ I N
Sbjct: 512 ACRHGGLVEEGRQFFKLMQNKYQIVPN 538
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 174/391 (44%), Gaps = 53/391 (13%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ YT + ACA G EG VH +K GF + + AL+ Y C A RV
Sbjct: 104 PDTYTHPLLAAACAARGDVREGLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRV 163
Query: 276 YDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
+D P +A N+++ + G +E A +F R+ E ++ + ++M+ +A G V++
Sbjct: 164 FD--AGPVWDAVSWNTILATYVRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEE 221
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
++ +F+ H R+ TW +M+S + +N+L +AL ++ MR+
Sbjct: 222 ARGVFDGAEH-----------------RDAFTWTAMVSCFERNDLFMEALAVFSDMREEG 264
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC------- 446
+ + AC+ G +Q G++ H +V+ S V V L+ MYS C
Sbjct: 265 WPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAAR 324
Query: 447 ------------------------GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
G + DA+A F + + +W+A++ G H+ SE
Sbjct: 325 RLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSE 384
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
A+ +F+ M +I P+ T V V+SAC + +G + ++ Y T+ T ++D
Sbjct: 385 ALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSLID 444
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ + G + A E + DM E W A++
Sbjct: 445 MYMKCGCMEAALE-VFDMLEEKGTPCWNAVI 474
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 32/219 (14%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N I+ +NG++ A+ LFD MP + VSW+ M+ G + E+L++ +M
Sbjct: 337 SWNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHE 396
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+K ++ T +++S C+ L++L GK +H + K Y +G+ L+ Y C +E A
Sbjct: 397 IKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAAL 456
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VFD L E W+ ++VG L++ + D+F +
Sbjct: 457 EVFDMLEEKGTPCWNAVIVGLAMNGLVTRSLDMFSE------------------------ 492
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
M +G +PNE TF V+ AC G EG+
Sbjct: 493 --------MEATGTAVPNEITFTGVLSACRHGGLVEEGR 523
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 283/532 (53%), Gaps = 25/532 (4%)
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
S+++ Y L+ +A VF + V+ W +I + +AL F MR SG
Sbjct: 43 SIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQ-SLFSRALASFVEMRASGR 101
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+ F SV+++C + G+ VHG +++ G + D G AL+ Y D
Sbjct: 102 -CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVR 160
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL------TEANSIS--------YN 319
+V++ + + + N++I G G EDA + + +A ++S Y
Sbjct: 161 KVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYV 220
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER--------NPVTWNSMIS 371
++KG ++G V + S++ + + I + ER + ++WNS+++
Sbjct: 221 DVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVA 280
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
GYVQN + +AL+L+ M + FS + AC+ L +L G+ LH ++++ F
Sbjct: 281 GYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGR 340
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
N+++ ++LVDMYS+CG+I A+ F ++ + +WTA++ G++ HG G EAV LFE M
Sbjct: 341 NIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMK 400
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHL 550
Q + PN FV VL+AC GLV+E F SM K YG+ LEHY V DLLGR+G L
Sbjct: 401 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 460
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
EA +FI M +E VW LLS+C N+E+ E+ A+K+F +D + + AYV++ N+Y
Sbjct: 461 EEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMY 520
Query: 611 AVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
A G+W + +R R+ ++K P CSWIE+ ++ H F DR++P+ + I
Sbjct: 521 ASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRI 572
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 184/400 (46%), Gaps = 84/400 (21%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+ R +F+ MP + VVS+NT++ GY++ ++++L +V M S++K + T S++L + +
Sbjct: 158 SVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFS 217
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+ ++ GK+IH V++ G + ++GS L+ YA IE+++RVF L+ + + W+
Sbjct: 218 EYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNS 277
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
++ GYVQ ++ AL+LFR M S +
Sbjct: 278 LVAGYVQNGRYNE--------------------------------ALRLFRQM-VSAKVR 304
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P F SVI ACA L GK +HG +++ GF + I AL++ Y C
Sbjct: 305 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKC--------- 355
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
G I+ A IF+R+ + +S+ ++I G+A++G ++
Sbjct: 356 ----------------------GNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAV 393
Query: 336 RLFEKMPHRSI-------ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE-------- 380
LFE+M + + +++ T S + ++ +NSM Y N E
Sbjct: 394 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 453
Query: 381 -----KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
K + Y + K+ ++ T S +S L +CS +L+
Sbjct: 454 LGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLE 493
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/462 (18%), Positives = 194/462 (41%), Gaps = 57/462 (12%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
+F + V++W +++ ++ + F +L+ M S + F ++L C +
Sbjct: 61 VFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMD 120
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
L G+ +H +++ G +C + G+ L+ Y+ I+ ++VF+ + + + ++ ++ G
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAG 180
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y Q + DA + +M D+ P+ +
Sbjct: 181 YAQSGMYEDALRMVREMGTSDL---------------------------------KPDAF 207
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T SV+ + +GK +HG +I+ G + D IG +L++ Y + + RV+ L
Sbjct: 208 TLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHL 267
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIKGYAVYGQVDDSK 335
+ NSL+ G + GR +A +F ++ A +++++S+I A + K
Sbjct: 268 YRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGK 327
Query: 336 RLFEKMPH----RSIISLNTMISVIPE----------MER----NPVTWNSMISGYVQNN 377
+L + R+I + ++ + + +R + V+W ++I G+ +
Sbjct: 328 QLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHG 387
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVG 436
+A+ L+ M++ + + F + ACS +G + + + K +
Sbjct: 388 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHY 447
Query: 437 TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
++ D+ R G + +A S + P + W+ L++ S H
Sbjct: 448 AAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVH 489
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 33/204 (16%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
++ ++ + +F + R +SWN+++ GY + +++E+L L M + V+ FS
Sbjct: 252 AKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFS 311
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+++ CA L +L GKQ+H VL+ G+ F+ S L+ Y+ C I+ A+++FD ++
Sbjct: 312 SVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLH 371
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+E+ W T +I G+A G E A+ LF M
Sbjct: 372 DEVSW-------------------------------TAIIMGHALHGHGHE-AVSLFEEM 399
Query: 209 RESGENMPNEYTFDSVIRACARLG 232
+ G PN+ F +V+ AC+ +G
Sbjct: 400 KRQGVK-PNQVAFVAVLTACSHVG 422
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+++ L + + S Q + LHA ++T S+ + ++ +Y+ +++A F
Sbjct: 4 SKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLVF 62
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
++ SP V AW +++ ++ L S A+ F M P+ F VL +C
Sbjct: 63 KTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSC 115
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 308/623 (49%), Gaps = 64/623 (10%)
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
++ E F ++L C L QI ++ G E ++V + A I A+R
Sbjct: 19 RVVEDKFISLLRTCGTCVRL---HQIQAQIVTHGLEGNDYVTPSFITACARLGGIRRARR 75
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VFD+ + N W+ M GY Q N DVVV
Sbjct: 76 VFDKTAQPNGATWNAMFRGYAQANC------------HLDVVV----------------- 106
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
LF M +G + PN +TF V+++CA A EG+ VH ++ K GF+ + +G ALI
Sbjct: 107 ---LFARMHRAGAS-PNCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKSNTFVGCALI 162
Query: 261 EFYC--GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
Y G A +V+ + + + A +++ ++ + A +F+ + + + +
Sbjct: 163 HMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAHVACRDMVSARRLFDLAPQRDVVLW 222
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------VIPEME-RNPV 364
N ++ GY G + ++ LF++MP R ++S NT++S + EM RN
Sbjct: 223 NVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGYATNGEVESFVKLFEEMPVRNVY 282
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-----------TFSVLFHACSCLGS 413
+WN +I GYV+N L ++AL+ + M L + T + ACS LG
Sbjct: 283 SWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGD 342
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L+ G+ +H + ++ N++VG +L+DMY++CG I A F + ++ W ++NG
Sbjct: 343 LEMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIING 402
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVP 532
+ HG ++A+ LFE M P+ TFVG+LSAC GLV G+ F+SM Y +VP
Sbjct: 403 LAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQSMVDDYSIVP 462
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+EHY C+VDLLGR+G + +A + ++ MP+E DAV+W ALL AC + N+E+ E A Q++
Sbjct: 463 QIEHYGCMVDLLGRAGLIDKAVDIVRKMPMEPDAVIWAALLGACRMYKNVEMAELALQRL 522
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
L+ +V++SNIY LG+ ++ + +K PGCS I N + F
Sbjct: 523 IELEPNNPGNFVMVSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCNDSMVEFYSL 582
Query: 653 DRNNPNCNVIYATLEHLTANLNS 675
D +P + IY L+ LT L S
Sbjct: 583 DERHPETDSIYRALQGLTILLRS 605
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 212/484 (43%), Gaps = 94/484 (19%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
T IT C R G + AR +FD+ +WN M GY++ + + L + MHR+
Sbjct: 57 TPSFITACARLGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGA 116
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA---------- 130
N TF ++ CA N+ +G+++HC+V K G++ FVG L+ Y+
Sbjct: 117 SPNCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADA 176
Query: 131 -----------------------NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
C ++ A+R+FD + + +LW++++ GY++ M
Sbjct: 177 YKVFAEMRDKNVFAWTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMV 236
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR------------------ 209
A ++F +MP +DV+ W ++SGYA + + E +KLF M
Sbjct: 237 AARELFDRMPDRDVMSWNTVLSGYATNGE-VESFVKLFEEMPVRNVYSWNGLIGGYVRNG 295
Query: 210 -----------------------ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
G +PN+YT +V+ AC+RLG GK VH
Sbjct: 296 LFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAES 355
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
G++ + +G ALI+ Y C + A+ V+D L+ + N++INGL G + DA +
Sbjct: 356 IGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVADALSL 415
Query: 307 FNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
F R+ A + +++ ++ G V + F+ M S++P++E
Sbjct: 416 FERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQSMVDD--------YSIVPQIEH- 466
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
+ M+ + L +KA+ + +RK+ ++ ++ L AC +++ +L
Sbjct: 467 ---YGCMVDLLGRAGLIDKAVDI---VRKMPMEPDAVIWAALLGACRMYKNVEMAELALQ 520
Query: 423 HLVK 426
L++
Sbjct: 521 RLIE 524
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 154/378 (40%), Gaps = 68/378 (17%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-- 75
++S N ++ NG++ + LF++MP+R V SWN ++ GY + F E+L M
Sbjct: 250 VMSWNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLV 309
Query: 76 ---------HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
V N+ T +L+ C++L L GK +H GY+ FVG+ L+
Sbjct: 310 LVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALI 369
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
YA C IE+A VFD L + + W+ ++ G ++D
Sbjct: 370 DMYAKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVAD------------------ 411
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
AL LF M+ +GE P+ TF ++ AC +G V +GLL
Sbjct: 412 --------------ALSLFERMKRAGER-PDGVTFVGILSACTHMGL-----VRNGLLHF 451
Query: 247 CGFEFDESI------GGALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGR 299
D SI G +++ D A+ + ++ P +L+
Sbjct: 452 QSMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKMPMEPDAVIWAALLGACRMYKN 511
Query: 300 IEDAELIFNRLTEANSISYNSMIKGYAVY---GQVDDSKRL--------FEKMPHRSIIS 348
+E AEL RL E + + + +Y G+ D RL F K+P S+I
Sbjct: 512 VEMAELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIG 571
Query: 349 LN-TMISVIPEMERNPVT 365
N +M+ ER+P T
Sbjct: 572 CNDSMVEFYSLDERHPET 589
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 391 KLAIDRT--------RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
KLA+++T F L C L Q + A +V E N YV S +
Sbjct: 7 KLAVNQTSKPLHRVVEDKFISLLRTCGTCVRLHQ---IQAQIVTHGLEGNDYVTPSFITA 63
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
+R G I A+ F + PN A W A+ GY+ + V+LF M PN TF
Sbjct: 64 CARLGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTF 123
Query: 503 VGVLSACVRAGLVNEGMKI 521
V+ +C A EG ++
Sbjct: 124 PMVVKSCATANAAKEGEEV 142
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 191/678 (28%), Positives = 328/678 (48%), Gaps = 91/678 (13%)
Query: 37 ARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
A +LF ++ R+ +V+WN M+ G+ + +++SL L S N KL +F+ + C+
Sbjct: 601 AWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACS 660
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L G+Q+HC V+K ++ +V + LL YA +E+AK+VFD++ + L +
Sbjct: 661 HGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNA 720
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
M+ ++ DA ++ KM ++GE
Sbjct: 721 MISAFIGNGRAYDALGLYNKM---------------------------------KAGETP 747
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA------- 268
+ +T S++ C+ +G++ G+ VH +IK + + +I AL+ Y C +
Sbjct: 748 VDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSV 807
Query: 269 ------------------------FDGAMRVYDRLENPCLNASNSLINGLISMG-RIEDA 303
F A+ ++ +E + A + ++ +IS G +E+
Sbjct: 808 FYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENV 867
Query: 304 EL-------IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
EL R E++ S++ Y+ +G + ++ +F MP+
Sbjct: 868 ELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPN------------- 914
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
+N V WNSMIS Y N L E ++ L + + + + + A S + +L +
Sbjct: 915 ----KNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLK 970
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ LHA+ ++ S++ V +L+DMY +CG + AQ F ++ N+ W +++ GY
Sbjct: 971 GKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGS 1030
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLE 535
HG EAV LF+ M + P+ TF+ ++++C +G+V EG+ +F+ M+ YGV P +E
Sbjct: 1031 HGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRME 1090
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
HY VVDLLGR+G L +A FI+ MPI+ D VW LL AC NME+GE A + +
Sbjct: 1091 HYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKM 1150
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN 655
+ S YV L N+Y + W + ++R + +KK PGCSWIE+ +RV F D +
Sbjct: 1151 EPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSS 1210
Query: 656 NPNCNVIYATLEHLTANL 673
+ IY TL L +N+
Sbjct: 1211 STRRIEIYKTLSSLKSNM 1228
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 143/598 (23%), Positives = 276/598 (46%), Gaps = 66/598 (11%)
Query: 32 GQLVTARNLFDQM-------PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
G L +A +FD+M P TV WN ++ GY K+ F+E L+ M ++ +
Sbjct: 490 GLLGSALQVFDKMSESRDSAPDITV--WNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDG 547
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
+ S +L +C +L+ + G+QIH ++++ +E ++ + L+ Y++C EA +F +
Sbjct: 548 YSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGK 607
Query: 145 L-HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
L + N + W++M+ G+V+ + W EK+L+
Sbjct: 608 LENRSNIVAWNVMIGGFVENGM------------------W--------------EKSLE 635
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
L+ + + + +F AC+ G+ VH +IK F+ D + +L+ Y
Sbjct: 636 LYSLAKNENCKLVSA-SFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMY 694
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYN 319
+ + A +V+D++ + + N++I+ I GR DA ++N++ T +S + +
Sbjct: 695 AKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTIS 754
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ER 361
S++ G +V G D + + ++ RS+ S + S + M ER
Sbjct: 755 SLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKER 814
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ V W SMI+G+ QN + AL L+ M K + + + A L +++ G L+H
Sbjct: 815 DVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIH 874
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
+K ES+V+V SLVDMYS+ G A+ FSS+ + N+ AW ++++ YS +GL
Sbjct: 875 GFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPE 934
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
++ L +L+ ++ + VL A + +G + + L+ ++
Sbjct: 935 MSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALI 994
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
D+ + G L A+ ++MP + V W ++++ N E R ++M + P
Sbjct: 995 DMYVKCGCLKYAQLIFENMP-RRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAP 1051
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 153/617 (24%), Positives = 275/617 (44%), Gaps = 102/617 (16%)
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ K+ ++L L S S + + TF ++L CA L++L G+ IH ++ G + +
Sbjct: 418 QQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPY 477
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
+ + L+ Y C + A +VFD++ E + D
Sbjct: 478 IATSLINMYVKCGLLGSALQVFDKMSESRD--------------------------SAPD 511
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
+ VW +I GY K E+ L F M+E G P+ Y+ V+ C RL + G+ +
Sbjct: 512 ITVWNPVIDGYFK-YGHFEEGLAQFCRMQELGIR-PDGYSLSIVLGICNRLSWYMAGRQI 569
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC-LNASNSLINGLI---- 295
HG +I+ FE D + ALI Y C A ++ +LEN + A N +I G +
Sbjct: 570 HGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGM 629
Query: 296 --------SMGRIEDAELI------------------FNRLTEANSISYN---------S 320
S+ + E+ +L+ F R + I N S
Sbjct: 630 WEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTS 689
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
++ YA G V+D+K++F+++ + + E+ N+MIS ++ N
Sbjct: 690 LLTMYAKSGSVEDAKKVFDQVLDKEV-----------ELR------NAMISAFIGNGRAY 732
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
AL LY M+ T S L CS +GS G+ +HA ++K +SNV + ++L+
Sbjct: 733 DALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALL 792
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
MY +CGS DA + F ++ +V AW +++ G+ + +A+ LF M ++ + ++
Sbjct: 793 TMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADS- 851
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEF 556
V+++ + AGL E +++ + + + LE V VD+ + G AE
Sbjct: 852 ---DVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMV 908
Query: 557 IKDMPIELDAVVWGALLSACWFW-----MNMEVGERAAQKMFGLDKKPISAYVI-LSNIY 610
MP + + V W +++S C+ W M++ + + Q F LD I+ ++ +S++
Sbjct: 909 FSSMPNK-NLVAWNSMIS-CYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVA 966
Query: 611 AVL-GKWGKKMDIRKRL 626
A+L GK IR ++
Sbjct: 967 ALLKGKTLHAYQIRLQI 983
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 190/468 (40%), Gaps = 90/468 (19%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
+T ++G + A+ +FDQ+ + V N M+ + + ++L L + M ++
Sbjct: 691 LTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDS 750
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
T S++LS C+ + S G+ +H V+K + + S LL Y C E+A VF
Sbjct: 751 FTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYT 810
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ E + + W M+ G+ Q DA D+F M K+ V + +++
Sbjct: 811 MKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMT--------------- 855
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
SVI A L G ++HG IK G E D + +L++ Y
Sbjct: 856 ------------------SVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYS 897
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLI-----NGLISM-----------GRIEDAELIFN 308
+ A V+ + N L A NS+I NGL M G D+ I
Sbjct: 898 KFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITT 957
Query: 309 RLTEANSISY-----------------------NSMIKGYAVYGQVDDSKRLFEKMPHRS 345
L +S++ N++I Y G + ++ +FE MP R
Sbjct: 958 VLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRR- 1016
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
N VTWNSMI+GY + E+A++L+ M++ TF L
Sbjct: 1017 ----------------NLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALI 1060
Query: 406 HACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+CS G +++G L ++ E + S+VD+ R G ++DA
Sbjct: 1061 TSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDA 1108
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
E P ++++ L + P++E I VQ + +AL+L+ A+ +
Sbjct: 394 ELTPKKAVLELMNL----PQVEE--------IKALVQQGKYSQALELHSKTPHSALTTAK 441
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
TF L C+ L +L G+ +HA +V +S+ Y+ TSL++MY +CG + A F
Sbjct: 442 FTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDK 501
Query: 459 I-----SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
+ S+P++ W +++GY +G E + F M E I P+ + VL C R
Sbjct: 502 MSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLS 561
Query: 514 LVNEGMKI 521
G +I
Sbjct: 562 WYMAGRQI 569
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 209/667 (31%), Positives = 328/667 (49%), Gaps = 91/667 (13%)
Query: 41 FDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST-MHRSNVKLNETTFSTILSVCAQLNS 99
FD + R V +WN M+ GY + E + S M S + + TF ++L C +
Sbjct: 42 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RT 98
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
+IDG +IHCL LK G+ +V + L+ Y+ + A+ +FDE
Sbjct: 99 VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE--------------- 143
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
MP +D+ W +ISGY +S + E AL L +R +
Sbjct: 144 ----------------MPVRDMGSWNAMISGYCQSGNAKE-ALTLSNGLRAM-----DSV 181
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFE----------FDESIGGALIEFYCGCEAF 269
T S++ AC G F G +H IK G E FD LI + +A+
Sbjct: 182 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELLRDCQKVFDRMYVRDLISWNSIIKAY 241
Query: 270 D------------GAMRVYDRLENPCLNASNSLINGLISMGRI------EDAELIFNRLT 311
+ MR+ R++ CL SL + L +G I + L
Sbjct: 242 ELNEQPLRAISLFQEMRL-SRIQPDCLTLI-SLASILSQLGDIRACRSVQGFTLRKGWFL 299
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
E +I N+++ YA G VD ++ +F +P+ +IS WN++IS
Sbjct: 300 EDITIG-NAVVVMYAKLGLVDSARAVFNWLPNTDVIS-----------------WNTIIS 341
Query: 372 GYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
GY QN +A+++Y M + I + T+ + ACS G+L+QG LH L+K
Sbjct: 342 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 401
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+V+V TSL DMY +CG + DA + F I N W L+ + HG G +AV+LF+ M
Sbjct: 402 LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 461
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGH 549
L++ + P+ TFV +LSAC +GLV+EG F M++ YG+ P+L+HY C+VD+ GR+G
Sbjct: 462 LDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQ 521
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
L A +FIK M ++ DA +WGALLSAC N+++G+ A++ +F ++ + + +V+LSN+
Sbjct: 522 LETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNM 581
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
YA GKW +IR ++K PG S +E++++V F ++ +P +Y L L
Sbjct: 582 YASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTAL 641
Query: 670 TANLNSV 676
A L +
Sbjct: 642 QAKLKMI 648
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 195/471 (41%), Gaps = 84/471 (17%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR LFD+MP+R + SWN M+ GY + E+L+L + + ++ T ++LS C +
Sbjct: 137 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTE 192
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
G IH +K G E
Sbjct: 193 AGDFNRGVTIHSYSIKHGLE---------------------------------------- 212
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
L+ D VF +M +D++ W +I Y + +A+ LF+ MR S P
Sbjct: 213 ------SELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL-RAISLFQEMRLS-RIQP 264
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGALIEFYCGCEAFDGAMRV 275
+ T S+ ++LG + V G ++ G F D +IG A++ Y D A V
Sbjct: 265 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 324
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYN-----SMIKGYAVYGQ 330
++ L N + + N++I+G G +A ++N + E I+ N S++ + G
Sbjct: 325 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 384
Query: 331 VDDSKRLFEKMPHRS-------IISLNTM----------ISVIPEMER-NPVTWNSMISG 372
+ +L ++ + SL M +S+ ++ R N V WN++I+
Sbjct: 385 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 444
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ----LLHAHLVKTP 428
+ + EKA+ L+ M + TF L ACS G + +GQ ++ TP
Sbjct: 445 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 504
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
S + G +VDMY R G + A S+S P+ + W AL++ HG
Sbjct: 505 --SLKHYGC-MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 552
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 191/417 (45%), Gaps = 57/417 (13%)
Query: 38 RNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQL 97
+ +FD+M +R ++SWN+++ Y + ++SL M S ++ + T ++ S+ +QL
Sbjct: 220 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 279
Query: 98 NSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ + + L+ G+ + +G+ ++ YA ++ A+ VF+ L + + W+ +
Sbjct: 280 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 339
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ GY Q +G+A +A++++ M E GE
Sbjct: 340 ISGYAQ--------------------------NGFAS------EAIEMYNIMEEEGEIAA 367
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
N+ T+ SV+ AC++ GA +G +HG L+K G D + +L + Y C + A+ ++
Sbjct: 368 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 427
Query: 277 DRLENPCLNAS--NSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQ 330
++ P +N+ N+LI G E A ++F + + + I++ +++ + G
Sbjct: 428 YQI--PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGL 485
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
VD+ + FE M T + P ++ + M+ Y + E AL+ ++
Sbjct: 486 VDEGQWCFEMM--------QTDYGITPSLKH----YGCMVDMYGRAGQLETALKF---IK 530
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
+++ S + L AC G++ G++ HL + E +V L +MY+ G
Sbjct: 531 SMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPE-HVGYHVLLSNMYASAG 586
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 34/222 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I N + + G + +AR +F+ +P V+SWNT++ GY++ E++ + + M
Sbjct: 302 ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE 361
Query: 78 SN-VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ N+ T+ ++L C+Q +L G ++H +LK+G FV + L Y C +E
Sbjct: 362 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLE 421
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
DA +F ++P+ + V W LI+ +
Sbjct: 422 -------------------------------DALSLFYQIPRVNSVPWNTLIACHGFHGH 450
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
G EKA+ LF+ M + G P+ TF +++ AC+ G EG+
Sbjct: 451 G-EKAVMLFKEMLDEGVK-PDHITFVTLLSACSHSGLVDEGQ 490
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI-MLEQDIVPNAATFVGVLSACVRAG 513
+F I + +V AW +++GY G SE + F + ML + P+ TF VL AC
Sbjct: 41 TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--- 97
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V +G KI +G + + ++ L R + A +MP+ D W A++
Sbjct: 98 TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMI 156
Query: 574 SA 575
S
Sbjct: 157 SG 158
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G+L A +LF Q+P V WNT++ + ++++ L M VK + TF
Sbjct: 415 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 474
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
T+LS C+ H ++ G CFE +
Sbjct: 475 TLLSACS-----------HSGLVDEGQWCFEMM 496
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 177/550 (32%), Positives = 291/550 (52%), Gaps = 63/550 (11%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYA--KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
A +F + K + + +I G A +S D AL LF+ M E +++TF SV++
Sbjct: 74 ALSIFNHIDKPESSAYNVMIRGLAFKRSPDN---ALLLFKKMHEKSVQH-DKFTFSSVLK 129
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
AC+R+ A EG+ VH L++K GF+ +E + LI+ Y C A V+D + + A
Sbjct: 130 ACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVA 189
Query: 287 SNSLING--------------------------------LISMGRIEDAEL-------IF 307
NS+++G L++ GR+ + E+ I
Sbjct: 190 WNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIV 249
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
++ N+ S+I YA GQVD +++LF++M R + V W+
Sbjct: 250 SKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDV-----------------VAWS 292
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+MISGY Q + ++AL L+ M+K + T + ++C+ LG+ + G+ +H ++ K
Sbjct: 293 AMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKK 352
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ V +GT L+D Y++CG I+ + F +S NV WTAL+ G +++G G A+ F
Sbjct: 353 KMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFF 412
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
MLE D+ PN TF+GVLSAC A LV++G +F SM + + + P +EHY C+VD+LGR
Sbjct: 413 SSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGR 472
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+G L EA +FI +MP +AVVW LL++C N+E+ E++ + + L+ Y++L
Sbjct: 473 AGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILL 532
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SN YA++G+ + +R + E+KK PGCS IEL+ VH F ED + + I+ L
Sbjct: 533 SNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDAL 592
Query: 667 EHLTANLNSV 676
+ + + +
Sbjct: 593 DKMMKQIKRL 602
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 213/465 (45%), Gaps = 57/465 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A ++F+ + ++N M+ G + D +L L MH +V+ ++ TFS++L C++
Sbjct: 74 ALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSR 133
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ +L +G+Q+H L+LKSG++ EFV + L+ YANC +I A+ VFD + E + + W+ M
Sbjct: 134 MKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSM 193
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
L GY + L W +++ KLFR + E
Sbjct: 194 LSGYTKNGL------------------WDEVV--------------KLFRKILELRIEF- 220
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
++ T SV+ AC RL G+++ ++ G + ++ +LI+ Y C D A +++
Sbjct: 221 DDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLF 280
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVD 332
D ++ + A +++I+G R ++A +F+ + + N ++ S++ A+ G +
Sbjct: 281 DEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYE 340
Query: 333 DSKRL---FEKMPHRSIISLNTM--------------ISVIPEME-RNPVTWNSMISGYV 374
K + +K + ++L T + V EM +N TW ++I G
Sbjct: 341 TGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLA 400
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNV 433
N + AL+ + +M + + TF + ACS + QG+ L + + E +
Sbjct: 401 NNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRI 460
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
+VD+ R G + +A ++ PN W L+ H
Sbjct: 461 EHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAH 505
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 37/314 (11%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
GQ+ AR++FD MP R++V+WN+ML GY+K +DE + L + ++ ++ T ++L
Sbjct: 170 GQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVL 229
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C +L +L G+ I ++ G + + L+ YA C +++ A+++FDE+ + + +
Sbjct: 230 MACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVV 289
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS M+ GY Q D C++AL LF M +
Sbjct: 290 AWSAMISGYAQ--------------------------------ADRCKEALNLFHEM-QK 316
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G PNE T SV+ +CA LGA+ GK VH + K + ++G LI+FY C D
Sbjct: 317 GNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDR 376
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAV 327
++ V+ + + +LI GL + G + A F+ + E N +++ ++ +
Sbjct: 377 SVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSH 436
Query: 328 YGQVDDSKRLFEKM 341
VD + LF M
Sbjct: 437 ACLVDQGRHLFNSM 450
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 164/361 (45%), Gaps = 53/361 (14%)
Query: 8 SQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDE 67
S+ L TL S +CG Q+ TAR LFD+M R VV+W+ M+ GY++ + E
Sbjct: 250 SKGLRRNNTLTTSLIDMYAKCG---QVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKE 306
Query: 68 SLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLF 127
+L+L M + NV NE T ++L CA L + GK +H + K + +G+ L+
Sbjct: 307 ALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLID 366
Query: 128 FYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKL 187
FYA C I+ + VF E M K+V WT L
Sbjct: 367 FYAKCGYIDRSVEVFKE-------------------------------MSFKNVFTWTAL 395
Query: 188 ISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
I G A + +G + AL+ F M E+ + PN+ TF V+ AC+ +G+ + + +
Sbjct: 396 IQGLANNGEG-KMALEFFSSMLEN-DVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRR- 452
Query: 248 GFEFDESIG--GALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDA 303
F+ + I G +++ + A + D + P NA +L+ + IE A
Sbjct: 453 DFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPP-NAVVWRTLLASCRAHKNIEMA 511
Query: 304 ELIF---NRLTEANSISYNSMIKGYAVYGQVDDSKRL--------FEKMPHRSIISLNTM 352
E RL A+S Y + YA+ G+V+D+ R+ +K+P S+I L+ +
Sbjct: 512 EKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGV 571
Query: 353 I 353
+
Sbjct: 572 V 572
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 196/673 (29%), Positives = 337/673 (50%), Gaps = 64/673 (9%)
Query: 27 ECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
+CGR + AR LF ++ R+ +V+WN M+ G+ + ++ SL NVK+ +
Sbjct: 186 KCGRPTE---ARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSS 242
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+F+ LS C Q + GKQ+HC +K G+E +V + LL Y C IE A++VF+E+
Sbjct: 243 SFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEV 302
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ LW+ ++ YV DA ++ K +KL
Sbjct: 303 PDKEIELWNALISAYVGNGYAYDALRIY--------------------------KQMKLC 336
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
+ +S +T +V+ + + G + G+++H ++K + +I AL+ Y
Sbjct: 337 TVLSDS-------FTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSK 389
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIK-- 323
+ A ++ ++ + A S+I+G + ++A L F R EA+ + +S I
Sbjct: 390 FGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEA-LDFFRAMEADLVKPDSDIMAS 448
Query: 324 -------------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME---------R 361
G ++G V S + S++ + + PE +
Sbjct: 449 IISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFG-FPERAGNIFSDMPLK 507
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
N V WNS+IS Y +NNL + ++ L+ + + + +F+ + A S + +L +G+ +H
Sbjct: 508 NLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVH 567
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
+LV+ ++ V +L+DMY +CG + AQ F IS N+ AW +++ GY HG S
Sbjct: 568 GYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECS 627
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCV 540
+A+ LF+ M I P+ TF+ +LS+C +GL+ EG+ +F MK +G+ P +EHY +
Sbjct: 628 KAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNI 687
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
VDL GR+G L +A F+K+MP+E D +W +LL +C +N+E+GE A K+ ++
Sbjct: 688 VDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKG 747
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
S YV L N+Y W + ++R + +KK PGCSWIE+ ++V F D ++P
Sbjct: 748 SNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITT 807
Query: 661 VIYATLEHLTANL 673
IY TL L N+
Sbjct: 808 EIYDTLSSLKRNM 820
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/573 (21%), Positives = 252/573 (43%), Gaps = 84/573 (14%)
Query: 32 GQLVTARNLFDQMP-----IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
G A +FDQ+P + V WN+++ GY ++ + +E + M S K
Sbjct: 102 GTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYK----- 156
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+GKQIH ++++ F+ + L+ Y C EA+ +F +L
Sbjct: 157 ---------------EGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLK 201
Query: 147 E-DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ N + W++M+ G+ + L ++ + ++ ++V K++S
Sbjct: 202 DRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENV----KVVSS--------------- 242
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCE-GKVVHGLLIKCGFEFDESIGGALIEFYC 264
+F + AC + G F GK VH IK GFE D + +L+ Y
Sbjct: 243 --------------SFTCTLSACGQ-GEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYG 287
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNS 320
C+ + A +V++ + + + N+LI+ + G DA I+ ++ ++S + +
Sbjct: 288 KCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILN 347
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERN 362
++ ++ G D + + ++ R + S T+ S + M ER+
Sbjct: 348 VLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERD 407
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
V W S+ISG+ QN +++AL + M + + + AC+ L + G +H
Sbjct: 408 VVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHG 467
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
++K+ + +V+V +SL+DMYS+ G A FS + N+ AW ++++ Y + L
Sbjct: 468 FVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDL 527
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
++ LF +L D+ P++ +F VL+A + +G + + + L+ ++D
Sbjct: 528 SINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLID 587
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + G L A+ + + E + V W +++
Sbjct: 588 MYIKCGLLKYAQHIFERIS-EKNLVAWNSMIGG 619
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 179/382 (46%), Gaps = 41/382 (10%)
Query: 218 EYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD 277
+T+ S+++ACA L GK +H +I G D+ I +LI Y C F A++V+D
Sbjct: 53 RFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFD 112
Query: 278 RLENPCLNAS-----NSLINGLISMGRIEDAELIFNRLTEA--------------NSISY 318
+L ++ NS+I+G G++E+ + F R+ + N +++
Sbjct: 113 QLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYKEGKQIHSYIVRNMLNF 172
Query: 319 N-----SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
+ ++I Y G+ +++ LF+K+ RS N V WN MI G+
Sbjct: 173 DPFLETALIDTYFKCGRPTEARYLFKKLKDRS----------------NIVAWNVMIGGF 216
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
+N L E +L+ Y+ + + S+F+ AC + G+ +H +K FE +
Sbjct: 217 GENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDP 276
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
YV TSL+ MY +C I A+ F+ + + W AL++ Y +G +A+ +++ M
Sbjct: 277 YVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLC 336
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
++ ++ T + VL++ AGL + G I + + ++ + ++ + + G + A
Sbjct: 337 TVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYA 396
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
M E D V WG+++S
Sbjct: 397 NSIFSTMK-ERDVVAWGSVISG 417
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 132/539 (24%), Positives = 233/539 (43%), Gaps = 85/539 (15%)
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS 123
++ E+L L + +S V T+ ++L CA L++L GK IH ++ +G
Sbjct: 36 QYIEALKLYT---KSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTG--------- 83
Query: 124 GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK---- 179
LH D + SL+ + YV+C +DA VF ++PK
Sbjct: 84 ---------------------LHSDQYITSSLINI-YVKCGTFTDAVKVFDQLPKSGVSV 121
Query: 180 -DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
DV +W +I GY + E+ + F M+ SG + EGK
Sbjct: 122 DDVTIWNSIIDGYFR-FGQLEEGMVQFGRMQSSG---------------------YKEGK 159
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC-LNASNSLINGLISM 297
+H +++ FD + ALI+ Y C A ++ +L++ + A N +I G
Sbjct: 160 QIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGEN 219
Query: 298 GRIEDA-ELIFNRLTEANSISYNSMIKGYAVYGQ-----------VDDSKRLFEKMP--H 343
G E++ E TE + +S + GQ D K FE P H
Sbjct: 220 GLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVH 279
Query: 344 RSIISLNTMISVIPEMER--NPVT------WNSMISGYVQNNLHEKALQLYMTMRKLAID 395
S++++ +I E+ N V WN++IS YV N AL++Y M+ +
Sbjct: 280 TSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVL 339
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
T + + S G G+L+H +VK P +S++ + ++L+ MYS+ G N A +
Sbjct: 340 SDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSI 399
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
FS++ +V AW ++++G+ + EA+ F M + P++ ++SAC V
Sbjct: 400 FSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKV 459
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+ G I + G+ + + ++D+ + G A DMP++ + V W +++S
Sbjct: 460 DLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK-NLVAWNSIIS 517
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 197/473 (41%), Gaps = 61/473 (12%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
+T G+ + +A +F+++P + + WN ++ Y ++L + M V +
Sbjct: 283 LTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDS 342
Query: 85 TTFSTILSVCAQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
T +L+ + + L D G+ IH ++K + + S LL Y+ + A +F
Sbjct: 343 FTILNVLT-SSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFS 401
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ E + + W ++ G+ Q +A D F M + D+V
Sbjct: 402 TMKERDVVAWGSVISGFCQNRKYKEALDFFRAM-EADLV--------------------- 439
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
P+ S+I AC L G +HG +IK G + D + +L++ Y
Sbjct: 440 -----------KPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMY 488
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLI-----NGLISMGRIEDAELIFNRLTEANSISY 318
+ A ++ + L A NS+I N L + ++++ N L +S+S+
Sbjct: 489 SKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLY-PDSVSF 547
Query: 319 NS----------MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------E 360
S ++KG +V+G + F+ ++I + ++ E
Sbjct: 548 TSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISE 607
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QL 419
+N V WNSMI GY + KA++L+ MR I TF L +C+ G +++G L
Sbjct: 608 KNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHL 667
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
+K E + ++VD+Y R G + DA + ++ P+ + W +L+
Sbjct: 668 FEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLL 720
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 36/215 (16%)
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
I VQ + +AL+LY K + TR T+ L AC+ L +LQ G+ +H+ ++ T
Sbjct: 28 IKSLVQQRQYIEALKLYT---KSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASF-----SSISSPNVAAWTALMNGYSHHGLGSEAV 484
S+ Y+ +SL+++Y +CG+ DA F S +S +V W ++++GY G E +
Sbjct: 85 HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGM 144
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK----IFRSMKSYGVVPTLEHYTCV 540
+ F M ++ EG + I R+M ++ P LE T +
Sbjct: 145 VQFGRM--------------------QSSGYKEGKQIHSYIVRNMLNFD--PFLE--TAL 180
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+D + G EA K + + V W ++
Sbjct: 181 IDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGG 215
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 187/588 (31%), Positives = 295/588 (50%), Gaps = 89/588 (15%)
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA--NCFEIEEAKRVFDELHE 147
+L C+ + L +QIH +LK+G E S LL F A N + A+ VFD +
Sbjct: 24 LLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
N +W+ +I GY+ S + E+AL L+
Sbjct: 81 PNTFMWN-------------------------------TMIRGYSNSKEP-EEALLLYHH 108
Query: 208 MRESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M ++P N YTF +++AC+ + A E + +H +IK GF G
Sbjct: 109 MLY--HSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGF---------------GS 151
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
E + +NSL+N G I+ A L+F+++ + +++S+NSMI GY
Sbjct: 152 EIY----------------TTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYT 195
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G+++ + +F MP ERN ++W SMISG V ++AL L+
Sbjct: 196 KCGEIEMAYEIFNHMP-----------------ERNIISWTSMISGCVGAGKPKEALNLF 238
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
M+ I AC+ LG L QG+ +HA++ K E + +G L+DMY++C
Sbjct: 239 HRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKC 298
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G + +A F + V+ WTA+++GY+ HG G EA+ F M + PN TF G+L
Sbjct: 299 GDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGIL 358
Query: 507 SACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
+AC AGLV+E +F SM+ +G P++EHY C+VDLLGR+G L EAEE I++MP++ +
Sbjct: 359 TACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPN 418
Query: 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKR 625
A +WGALL+AC N+E+G++ + + +D Y+ L++I+A G+W + +R++
Sbjct: 419 AAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQ 478
Query: 626 LTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ V K PGCS I +N H F D ++P I LE + L
Sbjct: 479 MKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERL 526
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 213/427 (49%), Gaps = 24/427 (5%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
+G L AR +FD++ WNTM+ GYS + +E+L L M +V N TF +
Sbjct: 65 SGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFL 124
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L C+ +++L + +QIH ++K G+ + + LL Y+ +I+ A+ +FD++ + +
Sbjct: 125 LKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W+ M+ GY +C + A+++F MP+++++ WT +ISG + E AL LF M+
Sbjct: 185 VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKE-ALNLFHRMQT 243
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+G + N S ++ACA LG +GK +H + K E D +G LI+ Y C +
Sbjct: 244 AGIKLDN-VALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLE 302
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYA 326
A+ V+ ++E ++ ++I+G GR +A F ++ E N +++ ++ +
Sbjct: 303 EAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACS 362
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G V ++K LFE S+ + P +E + M+ + L ++A +L
Sbjct: 363 HAGLVHEAKLLFE--------SMERIHGFKPSIEH----YGCMVDLLGRAGLLKEAEEL- 409
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSR 445
+ + + + + L +AC G+L+ G+ + L++ P Y+ L +++
Sbjct: 410 --IENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYI--HLASIHAA 465
Query: 446 CGSINDA 452
G N A
Sbjct: 466 AGEWNQA 472
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 140/354 (39%), Gaps = 99/354 (27%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK---------------- 61
I +TN + ++G + +AR LFDQ+ R VSWN+M+ GY+K
Sbjct: 153 IYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPE 212
Query: 62 -----W----------AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
W K E+L+L M + +KL+ + L CA L L GK I
Sbjct: 213 RNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWI 272
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H + K E +G L+ YA C ++EEA VF ++ E +W+ M+ GY
Sbjct: 273 HAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRG 332
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
+A + F+KM V PN+ TF ++
Sbjct: 333 REALEWFMKMQTAGV---------------------------------EPNQMTFTGILT 359
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGG--ALIEFYCGCEAFDGAMRVYDRLENPCL 284
AC+ G E K++ FE E I G IE Y GC
Sbjct: 360 ACSHAGLVHEAKLL--------FESMERIHGFKPSIEHY-GC------------------ 392
Query: 285 NASNSLINGLISMGRIEDA-ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRL 337
+++ L G +++A ELI N + N+ + +++ ++G ++ K++
Sbjct: 393 -----MVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQI 441
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 192/671 (28%), Positives = 334/671 (49%), Gaps = 70/671 (10%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
M R++ WNT+L S+ +++E L S M R K + T L C +L + G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 104 KQIHCLVLKS---GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
+ IH V K G + + VGS L++ Y
Sbjct: 61 EMIHGFVKKDVTLGSDLY--VGSSLIYMY------------------------------- 87
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
++C M +A +F ++ K D+V W+ ++SG+ K+ +A++ FR M + + P+ T
Sbjct: 88 IKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKN-GSPYQAVEFFRRMVMASDVTPDRVT 146
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
+++ AC +L G+ VHG +I+ GF D S+ +L+ Y AF A+ ++ +
Sbjct: 147 LITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIA 206
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKR 336
+ + +++I + G +A L+FN + TE N + +++ A ++ ++
Sbjct: 207 EKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRK 266
Query: 337 LFEKMPHRSI---ISLNTMI-----------------SVIPEMERNPVTWNSMISGYVQN 376
E + + + ++T + S IP ++ V+W ++ISG+ N
Sbjct: 267 THELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPR--KDVVSWVALISGFTLN 324
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSV-LFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
+ ++++ + M R + V + +CS LG L+Q + H++++K F+SN ++
Sbjct: 325 GMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI 384
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ-D 494
G SLV++YSRCGS+ +A F+ I+ + WT+L+ GY HG G++A+ F M++ +
Sbjct: 385 GASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSE 444
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
+ PN TF+ +LSAC AGL++EG++IF+ M Y + P LEHY +VDLLGR G L A
Sbjct: 445 VKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 504
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
E K MP + G LL AC N E+ E A+K+F L+ Y+++SN+Y V
Sbjct: 505 IEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVK 564
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE----HL 669
G+W +R + +KK S IE+ +VH F +D +P +Y L+ H+
Sbjct: 565 GEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHM 624
Query: 670 TANLNSVVLFD 680
+L + V F+
Sbjct: 625 KEDLENCVYFE 635
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 139/311 (44%), Gaps = 39/311 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A NLF + + V+SW+T++ Y + E+L + + M + N T +L CA
Sbjct: 198 AVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAA 257
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ L G++ H L ++ G E V + L+ Y CF EEA
Sbjct: 258 AHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA------------------ 299
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENM 215
+ VF ++P+KDVV W LISG+ +++G ++++ F M
Sbjct: 300 -------------YAVFSRIPRKDVVSWVALISGF--TLNGMAHRSIEEFSIMLLENNTR 344
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ V+ +C+ LG + K H +IK GF+ + IG +L+E Y C + A +V
Sbjct: 345 PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 404
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-----NSISYNSMIKGYAVYGQ 330
++ + SLI G G+ A FN + ++ N +++ S++ + G
Sbjct: 405 FNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGL 464
Query: 331 VDDSKRLFEKM 341
+ + R+F+ M
Sbjct: 465 IHEGLRIFKLM 475
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 46/320 (14%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNETTFSTILSVCA 95
A +F ++P + VVSW ++ G++ S+ S M +N + + +L C+
Sbjct: 299 AYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCS 358
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+L L K H V+K G++ F+G+ L+ Y+ C + A +VF+ + + ++W+
Sbjct: 359 ELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTS 418
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
LI+GY G KAL+ F M +S E
Sbjct: 419 -------------------------------LITGYGIHGKGT-KALETFNHMVKSSEVK 446
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG--GALIEFYCGCEAFDGAM 273
PNE TF S++ AC+ G EG + L++ + ++ L++ D A+
Sbjct: 447 PNEVTFLSILSACSHAGLIHEGLRIFKLMVN-DYRLAPNLEHYAVLVDLLGRVGDLDTAI 505
Query: 274 RVYDRLENPCLNASNSLINGLISMGRI----EDAELIFNRL--TEANSISYNSMIKG-YA 326
+ R+ + + ++ L+ RI E AE + +L E+N Y ++ Y
Sbjct: 506 EITKRMP---FSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYG 562
Query: 327 VYGQVDDSKRLFEKMPHRSI 346
V G+ ++ ++L + R I
Sbjct: 563 VKGEWENVEKLRNSVKQRGI 582
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-VKLNETTFS 88
R G L A +F+ + ++ V W +++ GY K ++L + M +S+ VK NE TF
Sbjct: 394 RCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFL 453
Query: 89 TILSVCAQLNSLIDGKQIHCLVL 111
+ILS C+ + +G +I L++
Sbjct: 454 SILSACSHAGLIHEGLRIFKLMV 476
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 192/646 (29%), Positives = 320/646 (49%), Gaps = 64/646 (9%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
LFD+MP T + + + + + L L M R+ V + TF + CA+ +
Sbjct: 59 LFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRA 118
Query: 100 LIDGKQIHCLVLKSGYECFE--------FVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ + C +L + CF V + ++ Y +A+R FD++ + +
Sbjct: 119 HV----LLCQMLHAA--CFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAV 172
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ++ G + L+ DA+ + P ++V+ WT LISGY+++ E A+ F M
Sbjct: 173 AWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAE-AVDCFNSMLSD 231
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+E T ++ ACA+L G+ +H L+ + G + ALI+ Y C
Sbjct: 232 GIE-PDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGR 290
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A V+D ++GR + S+N+MI GY G V
Sbjct: 291 AWEVFD------------------ALGRGRRPQ------------SWNAMIDGYCKLGHV 320
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
D ++ LF++M +R+ VT+NS+I+GY+ +AL L+M MR+
Sbjct: 321 DVARYLFDQME-----------------DRDLVTFNSLITGYIHGGRLREALLLFMQMRR 363
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+ T L AC+ LG+L QG+ LHA + + E ++Y+GT+L+DMY +CG + +
Sbjct: 364 HDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEE 423
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A F ++S +V W+A++ G + +G+G A+ F M PN+ T++ +L+AC
Sbjct: 424 ASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSH 483
Query: 512 AGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
+ L++EG F M+ + + P +EHY C++DLLGRSG L EA + ++ MP++ +AV+W
Sbjct: 484 SCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWA 543
Query: 571 ALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630
++LSAC + + AA+ + L+ + YV L NIY +W IR+ +
Sbjct: 544 SILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERG 603
Query: 631 VKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
VKK G S I + +VH F V DR +P I A +E +T L SV
Sbjct: 604 VKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSV 649
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 194/423 (45%), Gaps = 23/423 (5%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V+ I+ + G L A L P R V+SW ++ GYS+ + E++ ++M
Sbjct: 172 VAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSD 231
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
++ +E T +LS CAQL L+ G+ +H LV + G + L+ YA C +I A
Sbjct: 232 GIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRA 291
Query: 139 KRVFDELHEDNELL-WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
VFD L W+ M+ GY + + A +F +M +D+V + LI+GY
Sbjct: 292 WEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHG-GR 350
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+AL LF MR N +T S++ ACA LGA +G+ +H + + E D +G
Sbjct: 351 LREALLLFMQMRRHDLRADN-FTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGT 409
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI--SMGRIEDAELIFNRLT--EA 313
AL++ Y C + A V+ + ++ +++I GL MG+ + ++ +
Sbjct: 410 ALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQP 469
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
NS++Y +++ + +D+ + FE+M + ++ P +E + MI
Sbjct: 470 NSVTYIAILTACSHSCLLDEGRLYFEEM--------RLLHNIRPLIEH----YGCMIDLL 517
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESN 432
++ L ++A+ L TM + ++ + AC + HL+K P E
Sbjct: 518 GRSGLLDEAMDLVRTM---PMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDA 574
Query: 433 VYV 435
VYV
Sbjct: 575 VYV 577
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 195/667 (29%), Positives = 324/667 (48%), Gaps = 61/667 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNETTFSTI 90
G + AR++F + V +N ++ G+S SLS+ + + +S ++K N +T++
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
+S + G+ IH + G + +GS ++ Y + +E+A++VFD
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFD------- 178
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+MP+KD ++W +ISGY K+ E ++++FR +
Sbjct: 179 ------------------------RMPEKDTILWNTMISGYRKNEMYVE-SIQVFRDLIN 213
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+ T ++ A A L G +H L K G + + I Y C
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK 273
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG------ 324
++ P + A N++I+G S G E + +F L + + +S +
Sbjct: 274 MGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG 333
Query: 325 -----YAVYGQVDDSKRLFEKMPHRSI-ISLNTMISVIPEME-----------RNPVTWN 367
YA++G S L H S+ +L T+ S + E+E ++ +WN
Sbjct: 334 HLMLIYAIHGYCLKSNFL----SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+MISGY QN L E A+ L+ M+K T + + AC+ LG+L G+ +H + T
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
FES++YV T+L+ MY++CGSI +A+ F ++ N W +++GY HG G EA+ +F
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIF 509
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
ML I P TF+ VL AC AGLV EG +IF SM YG P+++HY C+VD+LGR
Sbjct: 510 YEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGR 569
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+GHL A +FI+ M IE + VW LL AC + + ++K+F LD + +V+L
Sbjct: 570 AGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLL 629
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SNI++ + + +R+ ++ K PG + IE+ H F+ D+++P IY L
Sbjct: 630 SNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKL 689
Query: 667 EHLTANL 673
E L +
Sbjct: 690 EKLEGKM 696
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 35/252 (13%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGY 59
M +YA L + S + A+T + ++ +AR LFD+ P +++ SWN M+ GY
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 60 SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
++ ++++SL M +S N T + ILS CAQL +L GK +H LV + +E
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
+V + L+ YA C I EA+R+FD + + NE+ W+ M
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTM----------------------- 492
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-K 238
ISGY G ++AL +F M SG P TF V+ AC+ G EG +
Sbjct: 493 --------ISGYGLHGQG-QEALNIFYEMLNSGIT-PTPVTFLCVLYACSHAGLVKEGDE 542
Query: 239 VVHGLLIKCGFE 250
+ + ++ + GFE
Sbjct: 543 IFNSMIHRYGFE 554
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 15/185 (8%)
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+++T+ F + + L Q HA ++ F +++ + T L S G+I A+ F
Sbjct: 19 SKNTYLDFFKRSTSISHLAQ---THAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIF 75
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACV----- 510
S+ P+V + LM G+S + ++ +F + D+ PN++T+ +SA
Sbjct: 76 LSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDD 135
Query: 511 RAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
RAG V G + S ++ + +V + + + +A + MP E D ++W
Sbjct: 136 RAGRVIHGQAVVDGCDSELLLG-----SNIVKMYFKFWRVEDARKVFDRMP-EKDTILWN 189
Query: 571 ALLSA 575
++S
Sbjct: 190 TMISG 194
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 193/678 (28%), Positives = 328/678 (48%), Gaps = 91/678 (13%)
Query: 37 ARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
A +LF ++ R+ +V+WN M+ G+ + +++SL L S N KL +F+ + C+
Sbjct: 196 AWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACS 255
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L G+Q+HC V+K ++ +V + LL YA +E+AK+VFD++ + L +
Sbjct: 256 HGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNA 315
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
M+ ++ DA ++ KM ++GE
Sbjct: 316 MISAFIGNGRAYDALGLYNKM---------------------------------KAGETP 342
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLI-------------------KCGF------- 249
+ +T S++ C+ +G++ G+ VH +I KCG
Sbjct: 343 VDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSV 402
Query: 250 -----EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG-RIEDA 303
E D G++I +C F A+ ++ +E + A + ++ +IS G +E+
Sbjct: 403 FYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENV 462
Query: 304 EL-------IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
EL R E++ S++ Y+ +G + ++ +F MP+
Sbjct: 463 ELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPN------------- 509
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
+N V WNSMIS Y N L E ++ L + + + + + A S + +L +
Sbjct: 510 ----KNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLK 565
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ LHA+ ++ S++ V +L+DMY +CG + AQ F ++ N+ W +++ GY
Sbjct: 566 GKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGS 625
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLE 535
HG EAV LF+ M + P+ TF+ ++++C +G+V EG+ +F+ M+ YGV P +E
Sbjct: 626 HGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRME 685
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
HY VVDLLGR+G L +A FI+ MPI+ D VW LL AC NME+GE A + +
Sbjct: 686 HYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKM 745
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN 655
+ S YV L N+Y + W + ++R + +KK PGCSWIE+ +RV F D +
Sbjct: 746 EPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSS 805
Query: 656 NPNCNVIYATLEHLTANL 673
+ IY TL L +N+
Sbjct: 806 STRRIEIYKTLSSLKSNM 823
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 144/642 (22%), Positives = 278/642 (43%), Gaps = 82/642 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
+R + S N+ + + K+ ++L L S S + + TF ++L CA
Sbjct: 8 SRKFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCAS 67
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED-------- 148
L++L G+ IH ++ G + ++ + L+ Y C + A +VFD++ E
Sbjct: 68 LSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDIT 127
Query: 149 -------------------------NELLWSL----------------------MLVG-Y 160
EL W + L+G Y
Sbjct: 128 VWNPVIDGYFKYGHFEEGLAQFCRMQELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMY 187
Query: 161 VQCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
C+ +A+ +F K+ + ++V W +I G+ ++ EK+L+L+ + + +
Sbjct: 188 SSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVEN-GMWEKSLELYSLAKNENCKLVSA- 245
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
+F AC+ G+ VH +IK F+ D + +L+ Y + + A +V+D++
Sbjct: 246 SFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQV 305
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSK 335
+ + N++I+ I GR DA ++N++ T +S + +S++ G +V G D +
Sbjct: 306 LDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGR 365
Query: 336 RLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNSMISGYVQNN 377
+ ++ RS+ S + S + M ER+ V W SMI+G+ QN
Sbjct: 366 TVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNR 425
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+ AL L+ M K + + + A L +++ G L+H +K ES+V+V
Sbjct: 426 RFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVAC 485
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SLVDMYS+ G A+ FSS+ + N+ AW ++++ YS +GL ++ L +L+
Sbjct: 486 SLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYL 545
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
++ + VL A + +G + + L+ ++D+ + G L A+
Sbjct: 546 DSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIF 605
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
++MP + V W ++++ N E R ++M + P
Sbjct: 606 ENMP-RRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAP 646
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 190/468 (40%), Gaps = 90/468 (19%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
+T ++G + A+ +FDQ+ + V N M+ + + ++L L + M ++
Sbjct: 286 LTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDS 345
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
T S++LS C+ + S G+ +H V+K + + S LL Y C E+A VF
Sbjct: 346 FTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYT 405
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ E + + W M+ G+ Q DA D+F M K+ V + +++
Sbjct: 406 MKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMT--------------- 450
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
SVI A L G ++HG IK G E D + +L++ Y
Sbjct: 451 ------------------SVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYS 492
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLI-----NGLISM-----------GRIEDAELIFN 308
+ A V+ + N L A NS+I NGL M G D+ I
Sbjct: 493 KFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITT 552
Query: 309 RLTEANSISY-----------------------NSMIKGYAVYGQVDDSKRLFEKMPHRS 345
L +S++ N++I Y G + ++ +FE MP
Sbjct: 553 VLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPR-- 610
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
RN VTWNSMI+GY + E+A++L+ M++ TF L
Sbjct: 611 ---------------RNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALI 655
Query: 406 HACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+CS G +++G L ++ E + S+VD+ R G ++DA
Sbjct: 656 TSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDA 703
>gi|345505216|gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
Length = 617
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 282/528 (53%), Gaps = 60/528 (11%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+D +W +I ++ D ++AL LF M E+G ++ ++++ V++AC+RLG G
Sbjct: 88 EDPFLWNAVIKSHSHGKDP-KQALLLFCLMLENGVSV-DKFSMSLVLKACSRLGFVKGGL 145
Query: 239 VVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
+HG+L K G D + LI Y CGC F A +++DR+ + NS+I+G +
Sbjct: 146 QIHGILRKTGLCSDLFLQNCLIGLYLKCGCLGF--ARQIFDRMPQRDSVSFNSMIDGYVK 203
Query: 297 MGRIEDAELIFN----------------------------------RLTEANSISYNSMI 322
G IE A +F+ + E + IS+NSMI
Sbjct: 204 RGLIESARELFDLMPREVKNLISWNSIISGYAQTSDGVDIASNLFAEMPEKDLISWNSMI 263
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNS 368
GY +G+++D+K LF+ MP R +++ TMI ++ R+ V++NS
Sbjct: 264 DGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNS 323
Query: 369 MISGYVQNNLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
M++GYVQN H +AL+++ M K L+ D T T ++ A + LG L + +H ++V
Sbjct: 324 MMAGYVQNKYHMEALEIFSDMEKESHLSPDET--TLVIVLSAIAQLGRLSKAMDMHLYIV 381
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ F +G +L+DMYS+CGSI A F I + ++ W A++ G + HGLG A
Sbjct: 382 EKQFFLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFD 441
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
+ + + I P+ TFVGVL+AC +GLV EG+ F M + + + P L+HY C+VD+L
Sbjct: 442 MLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDIL 501
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
RSG + A+ I++MPIE + V+W L+AC E GE + + S+YV
Sbjct: 502 SRSGSIELAKNLIQEMPIEPNDVIWRTFLTACNHHKEFETGELVGKHLILQAGYNPSSYV 561
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
+LSN+YA GKW IR + +++K PGCSWIEL+ RVH F V+
Sbjct: 562 LLSNMYASFGKWKDVRRIRTMMKERKIEKIPGCSWIELDGRVHEFFVD 609
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 199/427 (46%), Gaps = 28/427 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+MP R VS+N+M+ GY K + + L M R VK N ++++I+
Sbjct: 174 GCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMPR-EVK-NLISWNSII 231
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S AQ + DG I + E + ++ Y IE+AK +FD + + +
Sbjct: 232 SGYAQTS---DGVDIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAMPRRDVV 288
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY + + A +F +MP +DVV + +++GY ++ E AL++F M +
Sbjct: 289 TWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHME-ALEIFSDMEKE 347
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T V+ A A+LG + +H +++ F +G ALI+ Y C +
Sbjct: 348 SHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQH 407
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSISYNSMIKGYAV 327
AM V++ +EN ++ N++I GL G E A I R + + I++ ++ +
Sbjct: 408 AMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSH 467
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V + FE M + I P ++ + M+ ++ E A L
Sbjct: 468 SGLVKEGLLCFELMRRKHKIE--------PRLQH----YGCMVDILSRSGSIELAKNL-- 513
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRC 446
++++ I+ + AC+ + G+L+ HL+ + + + YV L +MY+
Sbjct: 514 -IQEMPIEPNDVIWRTFLTACNHHKEFETGELVGKHLILQAGYNPSSYV--LLSNMYASF 570
Query: 447 GSINDAQ 453
G D +
Sbjct: 571 GKWKDVR 577
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 65/255 (25%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW-----AK--FD- 66
E ++S N I ++G++ A++LFD MP R VV+W TM+ GY+K AK FD
Sbjct: 253 EKDLISWNSMIDGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQ 312
Query: 67 -----------------------ESLSLVSTMHR-SNVKLNETTFSTILSVCAQLNSLID 102
E+L + S M + S++ +ETT +LS AQL L
Sbjct: 313 MPHRDVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSK 372
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
+H +++ + +G L+ Y+ C I+ A VF+ + + W+ M+ G
Sbjct: 373 AMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAI 432
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
L AFD+ +++ ++ + P++ TF
Sbjct: 433 HGLGESAFDMLLQIERRSI---------------------------------KPDDITFV 459
Query: 223 SVIRACARLGAFCEG 237
V+ AC+ G EG
Sbjct: 460 GVLNACSHSGLVKEG 474
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 206/670 (30%), Positives = 329/670 (49%), Gaps = 64/670 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
GQ+ + N D + ++ N L Y ++ L + M S+V+ ++ TF +L
Sbjct: 263 GQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILML 322
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ +++SL G+Q+HC+ LK G + V + L+ Y + A+ VFD + E
Sbjct: 323 ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE---- 378
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRE 210
+D++ W +I+G A+ +G E +A+ LF +
Sbjct: 379 ---------------------------RDLISWNSVIAGIAQ--NGLEVEAVCLFMQLLR 409
Query: 211 SGENMPNEYTFDSVIRACARLG-AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G P++YT SV++A + L K VH IK D + ALI+ Y
Sbjct: 410 CGLK-PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 468
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMG-----------------RIEDAEL--IFNRL 310
A +++R N L A N+++ G R +D L +F
Sbjct: 469 KEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 311 TEANSISYNSMIKGYAVYGQVD-----DSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
+I+ + YA+ D S L + + + IP + V
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV--PDDVA 585
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
W +MISG ++N E+A ++ MR + + T + L A SCL +L+QG+ +HA+ +
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 645
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K ++ +VGTSLVDMY++CGSI+DA F I N+ AW A++ G + HG G E +
Sbjct: 646 KLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQ 705
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLL 544
LF+ M I P+ TF+GVLSAC +GLV+E K RSM YG+ P +EHY+C+ D L
Sbjct: 706 LFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADAL 765
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G + +AE I+ M +E A ++ LL+AC + E G+R A K+ L+ SAYV
Sbjct: 766 GRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYV 825
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+LSN+YA KW + R + +VKKDPG SWIE+ +++H F V+DR+N +IY
Sbjct: 826 LLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYR 885
Query: 665 TLEHLTANLN 674
++ + ++
Sbjct: 886 KVKDMIRDIK 895
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 143/620 (23%), Positives = 267/620 (43%), Gaps = 74/620 (11%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK-----FDESLSLVSTMH 76
N I+ + G L AR +FD+MP R +VSWN++L Y++ ++ ++ L +
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ V + T S +L +C + + H K G + EFV L+ Y +++
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM------PKKDVVVWTKLISG 190
E K +F+E+ + +LW+LML Y++ +A D+ P + + ISG
Sbjct: 198 EGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISG 257
Query: 191 ----------YAKSVDGCEKA---------------------LKLFRWMRESGENMPNEY 219
+A D + LK F M ES ++
Sbjct: 258 DDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC-DQV 316
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
TF ++ ++ + G+ VH + +K G + ++ +LI YC F A V+D +
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSK 335
L + NS+I G+ G +A +F +L + + + S++K + +
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPE----G 432
Query: 336 RLFEKMPHRSIISLNTM------ISVIPEMERNP----------------VTWNSMISGY 373
K H I +N + ++I RN V WN+M++GY
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGY 492
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
Q++ K L+L+ M K T + +F C L ++ QG+ +HA+ +K+ ++ ++
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+V + ++DMY +CG ++ AQ +F SI P+ AWT +++G +G A +F M
Sbjct: 553 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 612
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
++P+ T + A + +G +I + T +VD+ + G + +A
Sbjct: 613 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 672
Query: 554 EEFIKDMPIELDAVVWGALL 573
K + + ++ W A+L
Sbjct: 673 YCLFKRIEM-MNITAWNAML 691
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 188/424 (44%), Gaps = 24/424 (5%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS----VDGCEKALKLFRWMRESGENM 215
Y +C ++ A VF KMP +D+V W +++ YA+S V+ ++A LFR +R+
Sbjct: 84 YSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD-VVY 142
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+ T +++ C G + HG K G + DE + GAL+ Y +
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
++ + + N ++ + MG E+A + + ++ ++ N + DDS
Sbjct: 203 FEEMPYRDVVLWNLMLKAYLEMGFKEEA-IDLSSAFHSSGLNPNEITLRLLARISGDDS- 260
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
+ +S + N SV + R N +S Y+ + + L+ + M + ++
Sbjct: 261 ---DAGQVKSFANGNDASSVSEIIFR-----NKGLSEYLHSGQYSALLKCFADMVESDVE 312
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
+ TF ++ + SL GQ +H +K + + V SL++MY + A+
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F ++S ++ +W +++ G + +GL EAV LF +L + P+ T VL A A +
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA---ASSL 429
Query: 516 NEGMKIFRSMKSYGV----VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
EG+ + + + + + V T ++D R+ + EAE + D V W A
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH--NFDLVAWNA 487
Query: 572 LLSA 575
+++
Sbjct: 488 MMAG 491
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 300 IEDAELIFNRLTEANSISY---------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
I ++L+ + T A +++ N++I Y+ G + ++R+F+KMP R ++S
Sbjct: 50 ITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVS-- 107
Query: 351 TMISVIPEMERNPVTWNSMISGYVQN------NLHEKALQLYMTMRKLAIDRTRSTFSVL 404
WNS+++ Y Q+ N+ ++A L+ +R+ + +R T S +
Sbjct: 108 ---------------WNSILAAYAQSSECVVENI-QQAFLLFRILRQDVVYTSRMTLSPM 151
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
C G + + H + K + + +V +LV++Y + G + + + F + +V
Sbjct: 152 LKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV 211
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
W ++ Y G EA+ L + PN T
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 182/526 (34%), Positives = 276/526 (52%), Gaps = 54/526 (10%)
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
W + Y ++ F+ ++ K +V W +I+ A+S D E AL+ F MR+
Sbjct: 15 WKIYRRRYSNNPNLTTLFNKYVD--KTNVFSWNSVIAELARSGDSVE-ALRAFSSMRKLS 71
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
PN TF I++C+ L G+ H + GFE D + AL++ Y C
Sbjct: 72 LK-PNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKC------ 124
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD 332
G + DA +F+ ++ N +S+ SMI GY Q D
Sbjct: 125 -------------------------GELRDARTLFDEISHRNIVSWTSMITGYV---QND 156
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
D+ HR++ + M ER+ ++WNS+I+ Y QN + ++++++ M K
Sbjct: 157 DA--------HRALRVFDGM------AERDVISWNSIIAVYAQNGMSTESMEIFHRMVKD 202
Query: 393 A-IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
I+ T S + AC+ GS + G+ +H ++K ESNV+VGTS++DMY +CG +
Sbjct: 203 GEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEM 262
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A+ +F + NV +W+A++ GY HG EA+ +F M + PN TFV VL+AC
Sbjct: 263 ARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSH 322
Query: 512 AGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
AGL+ EG F++M + V P +EHY C+VDLLGR+G+L EA + IK M + D VVWG
Sbjct: 323 AGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWG 382
Query: 571 ALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630
ALL AC N+++GE +A+K+F LD K YV+LSNIYA G+W +R + +
Sbjct: 383 ALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSG 442
Query: 631 VKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ K PG S +++ RVH F V DR +P IY LE L+ L V
Sbjct: 443 LVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEV 488
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 165/309 (53%), Gaps = 6/309 (1%)
Query: 40 LFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLN 98
LF++ +T V SWN+++ ++ E+L S+M + ++K N +TF + C+ L
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90
Query: 99 SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLV 158
L G+Q H L G+E FV S L+ Y+ C E+ +A+ +FDE+ N + W+ M+
Sbjct: 91 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150
Query: 159 GYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
GYVQ + A VF M ++DV+ W +I+ YA++ E ++++F M + GE N
Sbjct: 151 GYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTE-SMEIFHRMVKDGEINYNA 209
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
T +V+ ACA G+ GK +H +IK G E + +G ++I+ YC C + A + +DR
Sbjct: 210 VTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR 269
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDS 334
+ + + ++++ G G ++A +F + A N I++ S++ + G +++
Sbjct: 270 MREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 329
Query: 335 KRLFEKMPH 343
F+ M H
Sbjct: 330 WHWFKAMSH 338
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IVS IT +N A +FD M R V+SWN+++ Y++ ES+ + M +
Sbjct: 142 IVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVK 201
Query: 78 SN-VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ N T S +L CA S GK IH V+K G E FVG+ ++ Y C ++E
Sbjct: 202 DGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVE 261
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A++ FD + E N WS M+ GY + G+AK
Sbjct: 262 MARKAFDRMREKNVKSWSAMVAGYG--------------------------MHGHAK--- 292
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+AL++F M +G PN TF SV+ AC+ G EG
Sbjct: 293 ---EALEVFYEMNMAGVK-PNYITFVSVLAACSHAGLLEEG 329
>gi|218197545|gb|EEC79972.1| hypothetical protein OsI_21597 [Oryza sativa Indica Group]
Length = 731
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 198/707 (28%), Positives = 340/707 (48%), Gaps = 92/707 (13%)
Query: 17 LIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
++ N+ + E R G+L AR +FD MP R VVSWNT++ ++ ++ M
Sbjct: 34 VVSGNNRLMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMR 93
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDG---KQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
R + + T+FST LS CA+L +L G +Q+ V + + SGL+ +
Sbjct: 94 RQGFRPDHTSFSTALSACARLEALEMGSCLEQVLDGVESPNVALWNALISGLVMNH---- 149
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+ +A++ FD + N + W+ M+ G+ + + AF +F MP K+ V W +I G+
Sbjct: 150 RVGDARKAFDRMPVRNVVSWTAMIKGHFTVHEVDMAFQLFKLMPVKNSVSWCVMIGGFVT 209
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ +A++LF + +GE + N ++ A A + + G+ +HGL +K GF +D
Sbjct: 210 H-EKFSEAVELFNSLMMNGEEVTN-VILVKIVNAFAGMKSIRGGRCIHGLAVKSGFAYDL 267
Query: 254 SIGGALIEFYCGC-------------------------------EAFDGAMRVYDRLENP 282
+ +L+ YC + D A +++D + N
Sbjct: 268 VLEASLVLMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSDKIDEARKLFDSMNNR 327
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTE---------------------ANSISYN-- 319
+ NS+ING I+ GRI DA +++++TE A + YN
Sbjct: 328 DKISWNSMINGYINDGRIADATELYSKMTEKSLEAATALMSWFIDNGMLDKARDMFYNMP 387
Query: 320 --------SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI--------------P 357
+++ GY G +DD+ LF M R++++ N MIS +
Sbjct: 388 QIDVMSCTTLLFGYVKGGHMDDALDLFHMMQKRTVVTYNVMISGLFHQGKITEAYKLFNE 447
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS---L 414
R+ VTW+ +++G N L +ALQ Y +K+ + R + SV+ SCL + +
Sbjct: 448 SPTRDSVTWSCLVAGLATNGLIHEALQFY---KKMLLSNIRPSESVVSSLISCLSNYSMM 504
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
GQ HA +K +S++ + SL+ +Y +CG + AQ+ F ++ + W +++GY
Sbjct: 505 VHGQQFHATTIKIGLDSHLLIQNSLISLYCKCGEMIIAQSIFDLMAKRDKVTWNTIIHGY 564
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPT 533
+ + LG AV +FE M + + P+ TF+GVLSAC L+ E F +M +YG++P
Sbjct: 565 ALNNLGQNAVEMFESMTKAQVDPDDITFLGVLSACNHMSLLEEAKYFFNAMTCTYGILPN 624
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
+ HY C+VDL R + EAE +K MP E D+ +W +LLS C N ++ E AA ++
Sbjct: 625 IMHYACMVDLFCRKCMIKEAEGLVKSMPFEPDSAIWTSLLSGCRLTGNDKLAEHAASQLI 684
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWI 640
+D Y+ L +++ + K +R ++ +KD G SWI
Sbjct: 685 AIDPCTKMPYLHLISVHGLTNKSTVIDSLRSQIKSTATEKDVGYSWI 731
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 123/260 (47%), Gaps = 11/260 (4%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M Q+ +V+ N I+ G++ A LF++ P R V+W+ ++ G + E+L
Sbjct: 416 MMQKRTVVTYNVMISGLFHQGKITEAYKLFNESPTRDSVTWSCLVAGLATNGLIHEALQF 475
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M SN++ +E+ S+++S + + ++ G+Q H +K G + + + L+ Y
Sbjct: 476 YKKMLLSNIRPSESVVSSLISCLSNYSMMVHGQQFHATTIKIGLDSHLLIQNSLISLYCK 535
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV----VVWTKL 187
C E+ A+ +FD + + +++ W+ ++ GY NL +A ++F M K V + + +
Sbjct: 536 CGEMIIAQSIFDLMAKRDKVTWNTIIHGYALNNLGQNAVEMFESMTKAQVDPDDITFLGV 595
Query: 188 ISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC 247
+S + E+A F M + +PN + ++ R C K GL+
Sbjct: 596 LSA-CNHMSLLEEAKYFFNAMTCTYGILPNIMHYACMVDLFCRK---CMIKEAEGLVKSM 651
Query: 248 GFEFDESIGGALIEFYCGCE 267
FE D +I +L+ GC
Sbjct: 652 PFEPDSAIWTSLLS---GCR 668
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/491 (33%), Positives = 260/491 (52%), Gaps = 25/491 (5%)
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES--IGGALIEFYCGCE 267
+ G +P+ + +++ C RLG +G++VH L+ F D + ++ Y C
Sbjct: 79 QRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMYAKCG 137
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIK 323
D A R++D + + +LI G R DA L+F ++ + N + +S++K
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 324 GYAVYGQVDDSKRLFE---KMPHRSII----SLNTMISVIPEME-----------RNPVT 365
+D +L K ++S + +L M + M+ ++ V+
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WN++ISG+ + E AL L M++ T T+S + AC+ +G+L+QG+ +HAH++
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMI 317
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K+ + ++G +L+DMY++ GSI+DA+ F + P+V +W ++ G + HGLG E +
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLD 377
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
FE ML I PN +F+ VL+AC +GL++EG+ F MK Y V P + HY VDLLG
Sbjct: 378 RFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLG 437
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R G L AE FI++MPIE A VWGALL AC NME+G AA++ F LD ++
Sbjct: 438 RVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRML 497
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
LSNIYA G+W +RK + VKK P CSW+E+ + VH F D +P I
Sbjct: 498 LSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGK 557
Query: 666 LEHLTANLNSV 676
E ++ + +
Sbjct: 558 WEEISGKIKEI 568
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 153/328 (46%), Gaps = 37/328 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N + + G L AR +FD+MP + +V+W ++ G+S+ + ++L L M R
Sbjct: 123 LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ N T S++L + L G Q+H LK GY+ +VGS L+ YA C ++
Sbjct: 183 LGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDA 242
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ FD MP K V W LISG+A+ +G
Sbjct: 243 AQLAFD-------------------------------GMPTKSEVSWNALISGHARKGEG 271
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E AL L W + P +T+ SV+ ACA +GA +GK VH +IK G + IG
Sbjct: 272 -EHALHLL-WKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGN 329
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEA 313
L++ Y + D A RV+DRL P + + N+++ G G ++ F ++ E
Sbjct: 330 TLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEP 389
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKM 341
N IS+ ++ + G +D+ FE M
Sbjct: 390 NEISFLCVLTACSHSGLLDEGLYYFELM 417
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 33/224 (14%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
R G + A+ FD MP ++ VSWN ++ G+++ + + +L L+ M R N + T+S
Sbjct: 235 ARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYS 294
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++LS CA + +L GK +H ++KSG + F+G+ LL YA I++AKRVFD L +
Sbjct: 295 SVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKP 354
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ ML G Q L + D F +M + G E
Sbjct: 355 DVVSWNTMLTGCAQHGLGKETLDRFEQMLRI-----------------GIE--------- 388
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
PNE +F V+ AC+ G EG L+ K E D
Sbjct: 389 -------PNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPD 425
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 187/643 (29%), Positives = 319/643 (49%), Gaps = 61/643 (9%)
Query: 53 NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
N L SK K +E+ M ++ V ++ ++ + C +L SL G+ +H
Sbjct: 50 NLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLH----- 104
Query: 113 SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
R+ + + LL + +L Y +C + DA +
Sbjct: 105 --------------------------NRMRMGIENPSVLLQNCVLQMYCECGSLEDADKL 138
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
F +M + V T +IS YA+ +KA+ LF M ESG+ P+ + +++++
Sbjct: 139 FDEMSDLNAVSRTTMISAYAEQ-GLLDKAVGLFSRMLESGDKPPSS-MYTTLLKSLVNPR 196
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
A G+ +H +I+ G + SI ++ Y C GA RV+D++ A L+
Sbjct: 197 ALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMV 256
Query: 293 GLISMGRIEDA-ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI--ISL 349
G GR DA +L + +TE + ++S + + + F K H + + L
Sbjct: 257 GYTQAGRARDALKLFVDLITEG--VEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGL 314
Query: 350 NTMISVIPEM---------------------ERNPVTWNSMISGYVQNNLHEKALQLYMT 388
+SV + E N V+W+++ISGY Q + E+A++ + +
Sbjct: 315 ECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKS 374
Query: 389 MR-KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
+R K A+ T++ +F ACS L G +HA +K + Y ++L+ MYS+CG
Sbjct: 375 LRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCG 434
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
++DA F S+ +P++ AWTA ++G++++G SEA+ LFE M+ + PN+ TF+ VL+
Sbjct: 435 CLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLT 494
Query: 508 ACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
AC AGLV +G +M + Y V PT++HY C++D+ RSG L EA F+K+MP E DA
Sbjct: 495 ACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDA 554
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
+ W LS CW N+E+G+ A +++ LD + + YV+ N+Y GKW + ++ K +
Sbjct: 555 MSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLM 614
Query: 627 THLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+KK+ CSWI+ ++H F V D+++P IY L+
Sbjct: 615 NERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLKEF 657
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 210/475 (44%), Gaps = 61/475 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A LFD+M VS TM+ Y++ D+++ L S M S K + ++T+L
Sbjct: 130 GSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLL 189
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+L G+QIH V+++G + +G++ Y C + AKRVFD++ +
Sbjct: 190 KSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPV 249
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ++VGY Q DA +F+ + + V W
Sbjct: 250 AWTGLMVGYTQAGRARDALKLFVDLITEGV------------------------EW---- 281
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+ + F V++ACA L GK +H + K G E + S+G L++FY C +F+
Sbjct: 282 -----DSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFES 336
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI-----SYNSMIKGYA 326
A R + + P + +++I+G M + E+A F L N++ +Y S+ + +
Sbjct: 337 ACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACS 396
Query: 327 VYGQVDDSKRLFEKMPHRSII-------SLNTMIS----------VIPEMERNP--VTWN 367
V + ++ RS+I +L TM S V M+ NP V W
Sbjct: 397 VLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMD-NPDIVAWT 455
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ-LLHAHLVK 426
+ ISG+ +AL+L+ M + TF + ACS G ++QG+ L L K
Sbjct: 456 AFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRK 515
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG-YSHHGL 479
+ ++D+Y+R G +++A ++ P+ +W ++G ++H L
Sbjct: 516 YNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNL 570
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 187/412 (45%), Gaps = 58/412 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G LV A+ +FDQM ++ V+W ++ GY++ + ++L L + V+ + FS +L
Sbjct: 231 GWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVL 290
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
CA L L GKQIH V K G EC VG+ L+ FY C E A R F E+ E N++
Sbjct: 291 KACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV 350
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS ++ GY Q + E+A+K F+ +R
Sbjct: 351 SWSAIISGYCQMSQF--------------------------------EEAVKTFKSLRSK 378
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK---CGFEFDESIGGALIEFYCGCEA 268
+ N +T+ S+ +AC+ L G VH IK G ++ ES ALI Y C
Sbjct: 379 NAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES---ALITMYSKCGC 435
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKG 324
D A V++ ++NP + A + I+G G +A +F ++ + NS+++ +++
Sbjct: 436 LDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTA 495
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
+ G V+ K + M + +V P ++ ++ MI Y ++ L ++AL+
Sbjct: 496 CSHAGLVEQGKHYLDTMLRK--------YNVAPTIDH----YDCMIDIYARSGLLDEALR 543
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYV 435
M+ + + ++ C +L+ G++ L + P ++ YV
Sbjct: 544 F---MKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYV 592
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 3/236 (1%)
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
F ++P S +SL + S + + N + ++ +A + + M K + +
Sbjct: 23 FNQIP--SWVSLKSSTSSVKISHKQGQVENLHLVSLSKHGKLNEAFEFFQEMDKAGVSVS 80
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
++ LF AC L SL G+LLH + +V + ++ MY CGS+ DA F
Sbjct: 81 LYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFD 140
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
+S N + T +++ Y+ GL +AV LF MLE P ++ + +L + V ++
Sbjct: 141 EMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDI 200
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
G +I + G+ T +V++ + G L A+ M ++ V W L+
Sbjct: 201 GRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVK-KPVAWTGLM 255
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 16/144 (11%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
IT + G L A +F+ M +V+W + G++ + E+L L M +K N
Sbjct: 427 ITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNS 486
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLK--------SGYECFEFVGSGLLFFYANCFEIE 136
TF +L+ C+ + GK +L+ Y+C ++ YA ++
Sbjct: 487 VTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDC-------MIDIYARSGLLD 539
Query: 137 EAKRVFDEL-HEDNELLWSLMLVG 159
EA R + E + + W L G
Sbjct: 540 EALRFMKNMPFEPDAMSWKCFLSG 563
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 207/671 (30%), Positives = 324/671 (48%), Gaps = 61/671 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G+ A +F +MP R V SWN M+ GY K DE+L L M + V+ + TF
Sbjct: 135 RFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPC 194
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C + G+++H VL+ G+ V + L+ YA C ++ A++VFD
Sbjct: 195 VLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFD------ 248
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
M D + W +I+G+ ++ + C L+LF M
Sbjct: 249 -------------------------SMTVMDCISWNAMIAGHFENGE-CNAGLELFLTML 282
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E PN T SV A L K +HGL +K GF D + +LI+ Y
Sbjct: 283 HD-EVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMM 341
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI-----KG 324
A V+ R++ ++I+G G D L L E N++S + +
Sbjct: 342 RQARTVFSRMDTRDAMTWTAMISGYEKNG-FPDKALEVYALMEVNNVSPDDITIASALAA 400
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTW 366
A G +D +L E + IS + + I EM E++ V+W
Sbjct: 401 CACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSW 460
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHAHLV 425
+SMI+G+ N+ + +AL + M LA + S TF AC+ G+L+ G+ +HAH++
Sbjct: 461 SSMIAGFCFNHRNFEALYYFRHM--LADVKPNSVTFIAALAACAATGALRSGKEIHAHVL 518
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ E Y+ +L+D+Y +CG A A F + + +V +W ++ G+ HG G A+
Sbjct: 519 RCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALS 578
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
F M++ P+ TFV +L AC R G+V+EG ++F SM + Y +VP L+HY C+VDLL
Sbjct: 579 FFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLL 638
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
R+G L EA FI +MPI DA VWGALL+ C ++E+GE AA+ + L+ +V
Sbjct: 639 SRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHV 698
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+L ++YA W K +RK + + D GCSW+E+ VHAF +D ++P I
Sbjct: 699 LLCDLYADACLWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINT 758
Query: 665 TLEHLTANLNS 675
LE + + +
Sbjct: 759 VLEGIYERMKA 769
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 121/265 (45%), Gaps = 34/265 (12%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+M+ +G+ + R+F KMP R + S WN M+ GY ++ L
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPERDVFS-----------------WNVMVGGYGKSGL 169
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
++AL LY M + TF + +C + + G+ +HAH+++ F V V +
Sbjct: 170 LDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNA 229
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+ MY++CG + A+ F S++ + +W A++ G+ +G + + LF ML ++ PN
Sbjct: 230 LMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPN 289
Query: 499 AATFVGVLSACVRAGLVNE--------GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
T + S V +GL+++ G+ + R G + ++ + G +
Sbjct: 290 LMT---ITSVTVASGLLSDVTFAKEMHGLAVKR-----GFAGDVAFCNSLIQMYASLGMM 341
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
+A M DA+ W A++S
Sbjct: 342 RQARTVFSRMDTR-DAMTWTAMISG 365
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
+ IV TN + ++ ++ A +F M + VVSW++M+ G+ + E+L M
Sbjct: 424 SYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM 483
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
++VK N TF L+ CA +L GK+IH VL+ G E ++ + L+ Y C +
Sbjct: 484 -LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQ- 541
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
GY A+ F KDVV W +I+G+
Sbjct: 542 ----------------------TGY--------AWAQFCAHGAKDVVSWNIMIAGFVAHG 571
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
G + AL F M + GE P+E TF +++ AC+R G EG
Sbjct: 572 HG-DTALSFFNQMVKIGE-CPDEVTFVALLCACSRGGMVSEG 611
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 80/197 (40%), Gaps = 1/197 (0%)
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
H + Q + A + LF C +++ G AH + +G +
Sbjct: 69 HGQLAQALWLLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNA 128
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
++ M R G A F+ + +V +W ++ GY GL EA+ L+ M+ + P+
Sbjct: 129 MLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPD 188
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
TF VL +C G ++ + +G ++ ++ + + G + A +
Sbjct: 189 VYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFD 248
Query: 559 DMPIELDAVVWGALLSA 575
M + +D + W A+++
Sbjct: 249 SMTV-MDCISWNAMIAG 264
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 184/640 (28%), Positives = 310/640 (48%), Gaps = 57/640 (8%)
Query: 53 NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
N L +K E + M + + +N ++ + +C L +L DGK H L+
Sbjct: 61 NLHLISLAKQGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNR-LQ 119
Query: 113 SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
+F+ + +L Y +C A+R FD
Sbjct: 120 RMANSNKFIDNCILKMYCDCKSFTSAERFFD----------------------------- 150
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
K+ +D+ W+ +IS Y + ++A++LF M + G PN F ++I +
Sbjct: 151 --KIVDQDLSSWSTIISAYTEE-GRIDEAVRLFLRMLDLGIT-PNSSIFSTLIMSFTDPS 206
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
GK +H LI+ GF + SI + Y C DGA +++ A L+
Sbjct: 207 MLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMV 266
Query: 293 GLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFE---KMPHRS 345
G R DA L+F ++ E + ++ ++K A G + K++ K+ S
Sbjct: 267 GYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLES 326
Query: 346 IISLNTMI---------------SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+S+ T + + E N +W+++I+GY Q+ ++AL+++ +R
Sbjct: 327 EVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIR 386
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+ ++ +F ACS + L G +HA +K + + ++++ MYS+CG ++
Sbjct: 387 SKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVD 446
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A +F +I P+ AWTA++ +++HG EA+ LF+ M + PNA TF+G+L+AC
Sbjct: 447 YAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACS 506
Query: 511 RAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
+GLV EG KI SM YGV PT++HY C++D+ R+G L EA E I+ +P E D + W
Sbjct: 507 HSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSW 566
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
+LL CW N+E+G AA +F LD + YVI+ N+YA+ GKW + RK +
Sbjct: 567 KSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAER 626
Query: 630 EVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
++K+ CSWI + +VH F V DR++P IY+ L+ L
Sbjct: 627 NLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKEL 666
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 185/428 (43%), Gaps = 59/428 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A ++M + V+ ++ GY+K A+ ++L L M V+L+ FS IL
Sbjct: 241 GWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIIL 300
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
CA L L GKQIH +K G E VG+ L+ FY C E A++ F+ +HE N+
Sbjct: 301 KACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDF 360
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS ++ GY Q S FD +AL++F+ +R
Sbjct: 361 SWSALIAGYCQ----SGQFD----------------------------RALEVFKAIRSK 388
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G + N + + ++ +AC+ + G +H IK G S A+I Y C D
Sbjct: 389 GV-LLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDY 447
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAV 327
A + + ++ P A ++I G+ +A +F + N++++ ++ +
Sbjct: 448 AHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSH 507
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT--WNSMISGYVQNNLHEKALQL 385
G V + K++ + M E NP +N MI Y + L ++AL++
Sbjct: 508 SGLVKEGKKILDSMS--------------DEYGVNPTIDHYNCMIDVYSRAGLLQEALEV 553
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYS 444
+R L + ++ L C +L+ G + ++ + P +S YV + ++Y+
Sbjct: 554 ---IRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYV--IMFNLYA 608
Query: 445 RCGSINDA 452
G ++A
Sbjct: 609 LAGKWDEA 616
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 185/621 (29%), Positives = 307/621 (49%), Gaps = 89/621 (14%)
Query: 54 TMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKS 113
TM+ G+ + K +L+L + R + + T + +V A S + IHC+ K
Sbjct: 102 TMMRGFLRAGKPAHALALFRRVLRDRLPADARTI--VFAVKAATTSSSPAEAIHCVAFKR 159
Query: 114 GYECFE-FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
G+ VG+ L+ YA+ + +A+++FDE
Sbjct: 160 GFIGQSVLVGNALVHMYASSMSLPDARKLFDE---------------------------- 191
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
M +DVV WT L+ GYA+ ++A ++F M +G PNE T + A ++G
Sbjct: 192 ---MADRDVVSWTTLVDGYARG-GLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIG 247
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGAMRVYDRLENPCLNASNSL 290
G++VH +++ G ++ AL++ + CGC
Sbjct: 248 LLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGC------------------------ 283
Query: 291 INGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
+ A+ IF+ + + S+ SM+ YA G ++++ +LF+++P+R
Sbjct: 284 ---------VASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNR------ 328
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
N V+W+ M++ Y Q NL E+A++++ M ++ +T + AC+
Sbjct: 329 -----------NAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQ 377
Query: 411 LGSLQQGQLLH-AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
LG L G+ L+ A++V E V + + +DM+++CG + A F ++ NV +W
Sbjct: 378 LGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNT 437
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SY 528
++ ++ HG EA+ LF+ I P+ T++GVLSAC +GLV+EG F+ MK Y
Sbjct: 438 MIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVY 497
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P EHY C++DLLG+ G L EA E + MP+ D WGALL+AC N+E+G+ A
Sbjct: 498 GIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCA 557
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A K+ GLD YV++S IYA KWG+ IR + VKK+PGCS IE++ + H
Sbjct: 558 ADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVKKNPGCSSIEVDGKFHE 617
Query: 649 FSVEDRNNPNCNVIYATLEHL 669
F D ++ + IYA LE++
Sbjct: 618 FLAADVSHAHSEDIYAALENI 638
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 193/410 (47%), Gaps = 24/410 (5%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK-LNETTFSTIL 91
L AR LFD+M R VVSW T++ GY++ DE+ + M + NE T
Sbjct: 181 SLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAA 240
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S Q+ L G+ +H V++SG + + L+ + C + AK +FD + +
Sbjct: 241 SAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVY 300
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ Y +C + +A +F ++P ++ V W+ +++ Y+++ + E+A+++F M +
Sbjct: 301 SWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQA-NLPEEAMRIFNDMIAA 359
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVH-GLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G P + T SV+ ACA+LG G+ ++ ++ E ++ A I+ + C
Sbjct: 360 GVE-PIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVG 418
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA 326
A R++ +E+ + + N++I G+ E+A +F + + I+Y ++ +
Sbjct: 419 AASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACS 478
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G V + + F++M ++ +E + MI + L E+A ++
Sbjct: 479 HSGLVSEGRYHFKEM------------KIVYGIEPRAEHYACMIDLLGKVGLLEEAFEV- 525
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYV 435
R + + + + L +AC G+++ G+ LV P +S +YV
Sbjct: 526 --ARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYV 573
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 41/234 (17%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S ++ + G L A LF ++P R VSW+ M+ YS+ +E++ + + M
Sbjct: 299 VYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIA 358
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIH-CLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ V+ + T ++LS CAQL L G+ ++ ++ E + + + +A C ++
Sbjct: 359 AGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVG 418
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A R+F + + N + W+ M+V + +A +F K
Sbjct: 419 AASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKF-------------------- 458
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-------KVVHGL 243
KA+ +F P+E T+ V+ AC+ G EG K+V+G+
Sbjct: 459 ---KAIGIF----------PDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGI 499
>gi|356528072|ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 647
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 323/654 (49%), Gaps = 81/654 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+NK I+ R+G+L AR LFD M R V+WN+M+ GY + + L M R +V
Sbjct: 42 SNKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDV 101
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ ++ SGY F GS +EE +R
Sbjct: 102 -------------------------VSWNLIVSGY--FSCRGSRF---------VEEGRR 125
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+F+ + + + + W+ ++ GY + M A +F MP+++ V LI+G+ + D +
Sbjct: 126 LFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSSNALITGFLLNGD-VDS 184
Query: 201 ALKLFRWMRESGENMPNEY--TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG- 257
A+ FR MP Y + ++I R G E + G+L +CG D+ +
Sbjct: 185 AVDFFR-------TMPEHYSTSLSALISGLVRNG---ELDMAAGILCECGNGDDDLVHAY 234
Query: 258 -ALIEFYCGCEAFDGAMRVYDRLENPCLNAS-------------NSLINGLISMGRIEDA 303
LI Y + A R++D + + + NS++ + G I A
Sbjct: 235 NTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVSA 294
Query: 304 ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE----- 358
+F+R+ E ++ S+N+MI GY ++++ +LF +MP ++S N ++S +
Sbjct: 295 RELFDRMVEQDTCSWNTMISGYVQISNMEEASKLFREMPIPDVLSWNLIVSGFAQKGDLN 354
Query: 359 -----MERNP----VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
ER P ++WNS+I+GY +N ++ A+QL+ M+ R T S + C+
Sbjct: 355 LAKDFFERMPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGERPDRHTLSSVMSVCT 414
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWT 468
L +L G+ +H LV + + SL+ MYSRCG+I DA F+ I +V W
Sbjct: 415 GLVNLYLGKQIH-QLVTKIVIPDSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWN 473
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KS 527
A++ GY+ HGL +EA+ LF++M I P TF+ V++AC AGLV EG + F+SM
Sbjct: 474 AMIGGYASHGLAAEALELFKLMKRLKIHPTYITFISVMNACAHAGLVEEGRRQFKSMIND 533
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
YG+ +EH+ +VD+LGR G L EA + I MP + D VWGALLSAC N+E+
Sbjct: 534 YGIERRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLSACRVHNNVELALV 593
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
AA + L+ + + YV+L NIYA LG+W +R + VKK G SW++
Sbjct: 594 AADALIRLEPESSAPYVLLYNIYANLGQWDDAESVRVLMEEKNVKKQAGYSWVD 647
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 130/546 (23%), Positives = 236/546 (43%), Gaps = 118/546 (21%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTV----------------------------- 49
V+ N IT ++ AR LFD+MP R V
Sbjct: 71 VTWNSMITGYVHRREIARARQLFDEMPRRDVVSWNLIVSGYFSCRGSRFVEEGRRLFELM 130
Query: 50 -----VSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL------------- 91
VSWNT++ GY+K + D++L L + M N + + L
Sbjct: 131 PQRDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSSNALITGFLLNGDVDSAVDFFR 190
Query: 92 ----SVCAQLNSLIDGKQIHC-LVLKSGYECFEFVGSG----------LLFFYANCFEIE 136
L++LI G + L + +G C G+G L+ Y +E
Sbjct: 191 TMPEHYSTSLSALISGLVRNGELDMAAGILC--ECGNGDDDLVHAYNTLIAGYGQRGHVE 248
Query: 137 EAKRVFDELHED-------------NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
EA+R+FD + +D N + W+ M++ YV+ + A ++F +M ++D
Sbjct: 249 EARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVSARELFDRMVEQDTCS 308
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG------AFCEG 237
W +ISGY + + E+A KLFR M +P+ +++ ++ A+ G F E
Sbjct: 309 WNTMISGYVQ-ISNMEEASKLFREM-----PIPDVLSWNLIVSGFAQKGDLNLAKDFFER 362
Query: 238 KVVHGLL----IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
+ L+ I G+E +E GA I+ + + F+G +R + L++ S+ G
Sbjct: 363 MPLKNLISWNSIIAGYEKNEDYKGA-IQLFSRMQ-FEG-----ERPDRHTLSSVMSVCTG 415
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
L+++ + + ++ +S NS+I Y+ G + D+ +F ++
Sbjct: 416 LVNLYLGKQIHQLVTKIVIPDSPINNSLITMYSRCGAIVDACTVFNEI------------ 463
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
++ ++ +TWN+MI GY + L +AL+L+ M++L I T TF + +AC+ G
Sbjct: 464 ----KLYKDVITWNAMIGGYASHGLAAEALELFKLMKRLKIHPTYITFISVMNACAHAGL 519
Query: 414 LQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
+++G+ ++ E V SLVD+ R G + +A +++ P+ A W AL+
Sbjct: 520 VEEGRRQFKSMINDYGIERRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALL 579
Query: 472 NGYSHH 477
+ H
Sbjct: 580 SACRVH 585
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 159/337 (47%), Gaps = 44/337 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S N ++ + G L A++ F++MP++ ++SWN+++ GY K + ++ L S M
Sbjct: 337 VLSWNLIVSGFAQKGDLNLAKDFFERMPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQF 396
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + T S+++SVC L +L GKQIH LV K + + L+ Y+ C I +
Sbjct: 397 EGERPDRHTLSSVMSVCTGLVNLYLGKQIHQLVTKIVIPDSP-INNSLITMYSRCGAIVD 455
Query: 138 AKRVFDELHEDNELL-WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A VF+E+ +++ W+ M+ GY L ++A ++F M K + + I+ + ++
Sbjct: 456 ACTVFNEIKLYKDVITWNAMIGGYASHGLAAEALELFKLM--KRLKIHPTYIT-FISVMN 512
Query: 197 GCEKALKLFRWMRESGENMPNEYT-------FDSVIRACARLGAFCEGKVVHGLLIKCGF 249
C A L R ++M N+Y F S++ R G E L+ F
Sbjct: 513 ACAHA-GLVEEGRRQFKSMINDYGIERRVEHFASLVDILGRQGQLQEAM---DLINTMPF 568
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
+ D+++ GAL+ A RV++ +E L A+++LI R
Sbjct: 569 KPDKAVWGALLS----------ACRVHNNVE-LALVAADALI-----------------R 600
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
L +S Y + YA GQ DD++ + M +++
Sbjct: 601 LEPESSAPYVLLYNIYANLGQWDDAESVRVLMEEKNV 637
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 287/523 (54%), Gaps = 34/523 (6%)
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
+V + +ISG+ + E+ + ++ MR G MP+++TF I+AC + E K
Sbjct: 103 NVFAFNAIISGFITN-GFPEEGFEFYQKMRNEGV-MPDKFTFPCAIKACLDV---LEIKK 157
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
+HGLL K G E D IG AL+ Y + A ++ L + N+++NG +G+
Sbjct: 158 IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQ 217
Query: 300 IEDAELIFNRLTEANSISYNSMIKG----YAVYGQVDDSKRLFE---KMPHRSIISL-NT 351
E F R+ + + + + G +AV G +++ + + KM + S +++ N+
Sbjct: 218 FEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNS 277
Query: 352 MISV------------IPEM--ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
+I + I EM E++ +WNS++S + Q H+ L+L M I
Sbjct: 278 LIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPD 337
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE------SNVYVGTSLVDMYSRCGSIND 451
T + + ACS L +L G+ +H +++ + +V + +++DMY++CGS+ D
Sbjct: 338 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 397
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A F +S+ +VA+W ++ GY HG G+EA+ +F M E + P+ TFVGVLSAC
Sbjct: 398 AHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSH 457
Query: 512 AGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
AG V++G MKS Y V PT+EHYTCV+D+LGR+G L EA E MPIE + VVW
Sbjct: 458 AGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWR 517
Query: 571 ALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630
ALL+AC + + E AAQ++F L+ + +YV++SN+Y +G++ + +++R +
Sbjct: 518 ALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQN 577
Query: 631 VKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
V+K PGCSWIEL + VH F DR +P IYA L LTA L
Sbjct: 578 VRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLTARL 620
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 191/453 (42%), Gaps = 66/453 (14%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHC 108
V ++N ++ G+ +E M V ++ TF + C +++ K+IH
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACL---DVLEIKKIHG 160
Query: 109 LVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSD 168
L+ K G E F+GS L+ NC Y++ LM
Sbjct: 161 LLFKFGLELDVFIGSALV----NC---------------------------YLKFGLMEH 189
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A F ++P +DVV+W +++GYA+ + E L+ FR M + +P+ +T +
Sbjct: 190 AQVAFEELPIRDVVLWNAMVNGYAQ-IGQFEMVLETFRRMNDE-SVVPSRFTVTGXLSVF 247
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A +G G+++HG +K G++ ++ +LI+ Y C+ + A+ +++ + + + N
Sbjct: 248 AVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWN 307
Query: 289 SLINGLISMGRIEDAELIFNRLTEAN-------------------SISYNSMIKGYA-VY 328
S+++ G + + +R+ A ++ + I GY V
Sbjct: 308 SIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVS 367
Query: 329 GQVDDSKRLFEKMPHRSII-------SLNTMISVIPEMERNPV-TWNSMISGYVQNNLHE 380
G D K + + + ++I S+ V M V +WN MI GY +
Sbjct: 368 GLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGN 427
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ-LLHAHLVKTPFESNVYVGTSL 439
+AL+++ M ++ + TF + ACS G + QG+ L K + T +
Sbjct: 428 EALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCV 487
Query: 440 VDMYSRCGSINDA-QASFSSISSPNVAAWTALM 471
+DM R G +++A + + + N W AL+
Sbjct: 488 IDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 138/311 (44%), Gaps = 60/311 (19%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A+ F+++PIR VV WN M+ GY++ +F+ L M+ +V + T + L
Sbjct: 185 GLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXL 244
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
SV A + L +G+ IH +K GY+ V + L+ Y C IE+A +F+ + E
Sbjct: 245 SVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMRE---- 300
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
KD+ W ++S + + D + L+L M +
Sbjct: 301 ---------------------------KDIFSWNSIVSVHEQCGDH-DGTLRLLDRMLGA 332
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD-ESIGGALIEFYCGCEAFD 270
G P+ T +V+ AC+ L A G+ +HG +I G D + I L++
Sbjct: 333 GIQ-PDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLK--------- 382
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
N++I+ G + DA L+F R++ + S+N MI GY ++G
Sbjct: 383 -----------------NAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGY 425
Query: 331 VDDSKRLFEKM 341
+++ +F +M
Sbjct: 426 GNEALEMFSRM 436
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 125/288 (43%), Gaps = 31/288 (10%)
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
P E N +N++ISG++ N E+ + Y MR + + TF AC + +++
Sbjct: 98 PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIKK 157
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
+H L K E +V++G++LV+ Y + G + AQ +F + +V W A++NGY+
Sbjct: 158 ---IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQ 214
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
G + F M ++ +VP+ T G LS G +N G I G +
Sbjct: 215 IGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAV 274
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
++D+ G+ + +A E I +M E D W +++S + + R +M G
Sbjct: 275 SNSLIDMYGKCKCIEDALE-IFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAG 333
Query: 597 KKP-----------------------ISAYVILSNIYAVLGKWGKKMD 621
+P I Y+I+S LGK GK +D
Sbjct: 334 IQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSG----LGKDGKDID 377
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 149/337 (44%), Gaps = 64/337 (18%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M ++ + +N I G+ + A +F+ M + + SWN+++ + + D +L L
Sbjct: 266 MGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRL 325
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ M + ++ + T +T+L C+ L +L+ G++IH ++ SG
Sbjct: 326 LDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLG--------------- 370
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
++ K + D+ LL + ++ Y +C M DA VF +M KDV W +I GY
Sbjct: 371 ----KDGKDI------DDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGY 420
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
G E AL++F M E + P+E TF V+ AC+ G +G+ L++ ++
Sbjct: 421 GMHGYGNE-ALEMFSRMCEV-QLKPDEVTFVGVLSACSHAGFVSQGR---NFLVQMKSKY 475
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRL 310
D + P + +I+ L G++++A EL
Sbjct: 476 DVA---------------------------PTIEHYTCVIDMLGRAGQLDEAYELALTMP 508
Query: 311 TEANSISYNSMIKG-----YAVYGQVDDSKRLFEKMP 342
EAN + + +++ +AV +V ++R+FE P
Sbjct: 509 IEANPVVWRALLAACRLHKHAVLAEV-AAQRVFELEP 544
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 178/632 (28%), Positives = 308/632 (48%), Gaps = 78/632 (12%)
Query: 47 RTVVSWNTMLCGY-SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQ 105
R + WN+ + + S L + +H V + +S L C ++ + G +
Sbjct: 485 RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGME 544
Query: 106 IHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNL 165
IH ++K G++ ++ L+ FY C+ +E+A +VF E
Sbjct: 545 IHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHE--------------------- 583
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
MP + ++W + I +S + +K ++LFR M+ S +
Sbjct: 584 ----------MPNPEALLWNEAIILNLQS-EKLQKGVELFRKMQFSFLKAETATIVRVLQ 632
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
+ + LG GK HG +++ GF+ D +G +LI+ Y + A V+D ++N
Sbjct: 633 ASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKN---- 688
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
N ++NS++ GY+ G +D+ RL +M
Sbjct: 689 ---------------------------RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEG 721
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
I P++ VTWN MISGY ++AL + M++ + ++ + L
Sbjct: 722 IK---------PDL----VTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLL 768
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
AC+ L LQ+G+ +H ++ F +V+V T+L+DMYS+ S+ +A F I + +A
Sbjct: 769 RACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLA 828
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
+W ++ G++ GLG EA+ +F M + + P+A TF +LSAC +GL+ EG K F SM
Sbjct: 829 SWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSM 888
Query: 526 -KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
Y +VP LEHY C+VDLLGR+G+L EA + I MP++ DA +WGALL +C N++
Sbjct: 889 ITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKF 948
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
E AA+ +F L+ + Y+++ N+Y++ +W +R+ + V+ SWI++N
Sbjct: 949 AETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQ 1008
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
RVH FS +++ +P+ IY L L + + +
Sbjct: 1009 RVHVFSSDEKPHPDAGKIYFELYQLVSEMKKL 1040
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 165/342 (48%), Gaps = 21/342 (6%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
GR L A +F +MP + WN + + K + + L M S +K T
Sbjct: 569 GRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIV 628
Query: 89 TILSVC-AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
+L ++L L GK+ H VL++G++C +VG+ L+ Y + A+ VFD +
Sbjct: 629 RVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKN 688
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAKSVDGCEK-AL 202
N W+ ++ GY + DA + +M K+ D+V W +ISGYA + GC K AL
Sbjct: 689 RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYA--MWGCGKEAL 746
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
F M++ G MPN + ++RACA L +GK +H L I+ GF D + ALI+
Sbjct: 747 AFFAQMQQEGV-MPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDM 805
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISY 318
Y + A +V+ R++N L + N +I G G ++A +FN + + ++I++
Sbjct: 806 YSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITF 865
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
+++ G + + + F+ S+ T ++P +E
Sbjct: 866 TALLSACKNSGLIGEGWKYFD--------SMITDYRIVPRLE 899
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 142/333 (42%), Gaps = 42/333 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTV----VSWNTMLCGYSKWAKFDESLSLVS 73
I + N ++ G A L +QM + V+WN M+ GY+ W E+L+ +
Sbjct: 691 IFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFA 750
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M + V N + + +L CA L+ L GK+IHCL +++G+ FV + L+ Y+
Sbjct: 751 QMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSS 810
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK----KDVVVWTKLIS 189
++ A +VF + W+ M++G+ L +A VF +M K D + +T L+S
Sbjct: 811 SLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLS 870
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCG 248
K+ + K F M +P + ++ R G E ++H + +K
Sbjct: 871 A-CKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKP- 928
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
D +I GAL+ G+ R++ L+ A N
Sbjct: 929 ---DATIWGALL----------GSCRIHKNLKFAETAAKNLF------------------ 957
Query: 309 RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+L NS +Y M+ Y+++ + +D L E M
Sbjct: 958 KLEPNNSANYILMMNLYSIFNRWEDMDHLRELM 990
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 7/245 (2%)
Query: 359 MERNPVTWNSMISGYVQN--NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
+ RN + WNS + + + +LH L+++ + + +SV C+ + +
Sbjct: 483 LPRNYLKWNSFVEEFKSSAGSLH-IVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWL 541
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT-ALMNGYS 475
G +H L+K F+ +VY+ +L++ Y RC + A F + +P W A++
Sbjct: 542 GMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQ 601
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV-RAGLVNEGMKIFRSMKSYGVVPTL 534
L + V LF M + AT V VL A + G +N G + + G +
Sbjct: 602 SEKL-QKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDV 660
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
T ++D+ ++ L A+ +M + W +L+S F E R +M
Sbjct: 661 YVGTSLIDMYVKNHSLTSAQAVFDNMK-NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEK 719
Query: 595 LDKKP 599
KP
Sbjct: 720 EGIKP 724
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 194/667 (29%), Positives = 322/667 (48%), Gaps = 61/667 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNETTFSTI 90
G + AR++F + V +N ++ G+S SL++ + + +S ++K N +T++
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFA 125
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
+S + G IH + G + +GS ++ Y + +E+A++VFD
Sbjct: 126 ISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFD------- 178
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+MP+KD ++W +ISGY K+ E ++++FR +
Sbjct: 179 ------------------------RMPEKDTILWNTMISGYRKNEMYVE-SIQVFRDLIN 213
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+ T ++ A A L G +H L K G + + I Y C
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK 273
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG------ 324
A ++ P + A N++I+G S G E + +F L + + +S +
Sbjct: 274 MASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSG 333
Query: 325 -----YAVYGQVDDSKRLFEKMPHRSI-ISLNTMISVIPEME-----------RNPVTWN 367
YA++G S L H S+ +L T+ S + E+E ++ +WN
Sbjct: 334 HLMLIYAIHGYSLKSNFL----SHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+MISGY QN L E A+ L+ M+ T + + AC+ LG+L G+ +H + T
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
FES++YV T+L+ MY++CGSI +A+ F + N W +++GY HG G EA+ +F
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIF 509
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
ML I P TF+ VL AC AGLV EG +IF SM YG P+++HY CVVD+LGR
Sbjct: 510 SEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGR 569
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+GHL A +FI+ MPI+ VW LL AC + + ++K+F LD + +V+L
Sbjct: 570 AGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLL 629
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SNI++ + + +R+ ++ K PG + IE+ H F+ D+++P I+ L
Sbjct: 630 SNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKL 689
Query: 667 EHLTANL 673
E L +
Sbjct: 690 EKLEGKM 696
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 35/252 (13%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGY 59
M +YA +L + S + A+T + ++ +AR LFD+ P +++ SWN M+ GY
Sbjct: 336 MLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 60 SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
++ ++++SL M S N T + ILS CAQL +L GK +H LV + +E
Sbjct: 396 TQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
+V + L+ YA C I EA+R+FD + + NE+ W+ M
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTM----------------------- 492
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-K 238
ISGY G ++AL +F M SG P TF V+ AC+ G EG +
Sbjct: 493 --------ISGYGLHGHG-QEALTIFSEMLNSG-IAPTPVTFLCVLYACSHAGLVKEGDE 542
Query: 239 VVHGLLIKCGFE 250
+ + ++ + GFE
Sbjct: 543 IFNSMIHRYGFE 554
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 15/185 (8%)
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+++ F LF + + L Q HA +V F +++ + T L S G+I A+ F
Sbjct: 19 SKNNFLDLFKRSTSISHLAQ---THAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIF 75
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACV----- 510
S+ P+V + LM G+S + ++ +F + D+ PN++T+ +SA
Sbjct: 76 LSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDD 135
Query: 511 RAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
RAG V G I S ++ + +V + + + +A + MP E D ++W
Sbjct: 136 RAGCVIHGQAIVDGCDSELLLG-----SNIVKMYFKFWRVEDARKVFDRMP-EKDTILWN 189
Query: 571 ALLSA 575
++S
Sbjct: 190 TMISG 194
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 207/684 (30%), Positives = 326/684 (47%), Gaps = 66/684 (9%)
Query: 5 ATQSQTLMT-QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
A Q + T T I N + + G+L A ++F+ + + VVSWN+++ GYS+
Sbjct: 35 AVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNG 94
Query: 64 KFDES---LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
S + L M ++ N T + I + L S G+Q H LV+K
Sbjct: 95 GISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVK-------- 146
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG-YVQCNLMSDAFDVFIKMPKK 179
F +++ D L VG Y + L+ D VF MP++
Sbjct: 147 ------------------MSSFGDIYVDTSL------VGMYCKAGLVEDGLKVFAYMPER 182
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFR-WMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+ W+ ++SGYA + E+A+K+F ++RE E ++Y F +V+ + A G+
Sbjct: 183 NTYTWSTMVSGYA-TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+H + IK G ++ AL+ Y CE+ + A +++D + ++++ G G
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 299 RIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFE-KMPH---------RSIIS 348
+A +F+R+ A I G V D L E K H R + +
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVG--VLNACSDICYLEEGKQLHSFLLKLGFERHLFA 359
Query: 349 LNTMISVIPE--------------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
++ + + ER+ W S+ISGYVQN+ +E+AL LY M+ I
Sbjct: 360 TTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
T + + ACS L +L+ G+ +H H +K F V +G++L MYS+CGS+ D
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNL 479
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F + +V +W A+++G SH+G G EA+ LFE ML + + P+ TFV ++SAC G
Sbjct: 480 VFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGF 539
Query: 515 VNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V G F M G+ P ++HY C+VDLL R+G L EA+EFI+ I+ +W LL
Sbjct: 540 VERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILL 599
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
SAC E+G A +K+ L + S YV LS IY LG+ + K + V K
Sbjct: 600 SACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSK 659
Query: 634 DPGCSWIELNSRVHAFSVEDRNNP 657
+ GCSWIEL ++ H F V D +P
Sbjct: 660 EVGCSWIELKNQYHVFVVGDTMHP 683
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 156/383 (40%), Gaps = 62/383 (16%)
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
G+ VHG +I+ G L+ FY C A +++ + + + NSLI G
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 297 MGRIEDAELIFNRLTE--ANSISYN----------------------------------- 319
G I + + E A I N
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 320 -----SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
S++ Y G V+D ++F MP ERN TW++M+SGY
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMP-----------------ERNTYTWSTMVSGYA 195
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRS--TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
E+A++++ + + + S F+ + + + + G+ +H +K
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V + +LV MYS+C S+N+A F S N W+A++ GYS +G EAV LF M
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS 315
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552
I P+ T VGVL+AC + EG ++ + G L T +VD+ ++G L +
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLAD 375
Query: 553 AEEFIKDMPIELDAVVWGALLSA 575
A + D E D +W +L+S
Sbjct: 376 ARKGF-DCLQERDVALWTSLISG 397
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+L G+ +H +++T + + LV+ Y++CG + A + F++I +V +W +L+
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 473 GYSHHGLGSEA---VLLFEIMLEQDIVPNAATFVGVL---SACVRAGLVNEGMKIFRSMK 526
GYS +G S + + LF M QDI+PNA T G+ S+ + + + + M
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
S+G + T +V + ++G + + + MP E + W ++S
Sbjct: 149 SFGDIYV---DTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSG 193
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 187/588 (31%), Positives = 295/588 (50%), Gaps = 89/588 (15%)
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA--NCFEIEEAKRVFDELHE 147
+L C+ + L +QIH +LK+G E S LL F A N + A+ VFD +
Sbjct: 24 LLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
N +W+ +I GY+ S + E+AL L+
Sbjct: 81 PNTFMWN-------------------------------TMIRGYSNSKEP-EEALLLYHH 108
Query: 208 MRESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M ++P N YTF +++AC+ + A E + +H +IK GF G
Sbjct: 109 MLY--HSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGF---------------GS 151
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
E + +NSL+N G I+ A L+F+++ + +++S+NSMI GY
Sbjct: 152 EIY----------------TTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYT 195
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G+++ + +F MP ERN ++W SMISG V ++AL L+
Sbjct: 196 KCGEIEMAYEIFNHMP-----------------ERNIISWTSMISGCVGAGKPKEALNLF 238
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
M+ I AC+ LG L QG+ +HA++ K E + +G L+DMY++C
Sbjct: 239 HRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKC 298
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G + +A F + V+ WTA+++GY+ HG G EA+ F M + PN TF G+L
Sbjct: 299 GDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGIL 358
Query: 507 SACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
+AC AGLV+E +F SM+ +G P++EHY C+VDLLGR+G L EAEE I++MP++ +
Sbjct: 359 TACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPN 418
Query: 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKR 625
A +WGALL+AC N+E+G++ + + +D Y+ L++I+A G+W + +R++
Sbjct: 419 AAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQ 478
Query: 626 LTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ V K PGCS I +N H F D ++P I LE + L
Sbjct: 479 MKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERL 526
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 212/427 (49%), Gaps = 24/427 (5%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
+G L AR +FD++ WNTM+ GYS + +E+L L M +V N TF +
Sbjct: 65 SGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFL 124
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L C+ +++ + +QIH ++K G+ + + LL Y+ +I+ A+ +FD++ + +
Sbjct: 125 LKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W+ M+ GY +C + A+++F MP+++++ WT +ISG + E AL LF M+
Sbjct: 185 VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKE-ALNLFHRMQT 243
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+G + N S ++ACA LG +GK +H + K E D +G LI+ Y C +
Sbjct: 244 AGIKLDN-VALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLE 302
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYA 326
A+ V+ ++E ++ ++I+G GR +A F ++ E N +++ ++ +
Sbjct: 303 EAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACS 362
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G V ++K LFE S+ + P +E + M+ + L ++A +L
Sbjct: 363 HAGLVHEAKLLFE--------SMERIHGFKPSIEH----YGCMVDLLGRAGLLKEAEEL- 409
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSR 445
+ + + + + L +AC G+L+ G+ + L++ P Y+ L +++
Sbjct: 410 --IENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYI--HLASIHAA 465
Query: 446 CGSINDA 452
G N A
Sbjct: 466 AGEWNQA 472
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 140/354 (39%), Gaps = 99/354 (27%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK---------------- 61
I +TN + ++G + +AR LFDQ+ R VSWN+M+ GY+K
Sbjct: 153 IYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPE 212
Query: 62 -----W----------AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
W K E+L+L M + +KL+ + L CA L L GK I
Sbjct: 213 RNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWI 272
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H + K E +G L+ YA C ++EEA VF ++ E +W+ M+ GY
Sbjct: 273 HAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRG 332
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
+A + F+KM V PN+ TF ++
Sbjct: 333 REALEWFMKMQTAGV---------------------------------EPNQMTFTGILT 359
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGG--ALIEFYCGCEAFDGAMRVYDRLENPCL 284
AC+ G E K++ FE E I G IE Y GC
Sbjct: 360 ACSHAGLVHEAKLL--------FESMERIHGFKPSIEHY-GC------------------ 392
Query: 285 NASNSLINGLISMGRIEDA-ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRL 337
+++ L G +++A ELI N + N+ + +++ ++G ++ K++
Sbjct: 393 -----MVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQI 441
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 183/574 (31%), Positives = 296/574 (51%), Gaps = 83/574 (14%)
Query: 99 SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF--EIEEAKRVFDELHEDNELLWSLM 156
++ D ++IH +LK+G S +L F A +I A VF ++H N W+ +
Sbjct: 36 TMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQIHSPNLFSWNTI 95
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ G+ Q + A +FI D+++ + + P
Sbjct: 96 IRGFSQSSTPHHAISLFI-----DMLIVSSV---------------------------QP 123
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ T+ SV +A A+LG G +HG +IK G +FD I +I Y C
Sbjct: 124 HRLTYPSVFKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANC---------- 173
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
G + + F + + +++NSMI G A G+VD+S++
Sbjct: 174 ---------------------GFLSEMWKAFYERMDFDIVAWNSMIMGLAKCGEVDESRK 212
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
LF++MP RN V+WNSMISGYV+N +AL L+ M++ I
Sbjct: 213 LFDEMP-----------------LRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKP 255
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ T L +A + LG+L+QG+ +H ++ K FE NV V S++DMY +CGSI +A F
Sbjct: 256 SEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVF 315
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+++W ++ G + +G +EA+ LF + ++ P+ TFVGVL+AC +GLV+
Sbjct: 316 EMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVD 375
Query: 517 EGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + F M K+Y + P+++HY+C+VD LGR+G L EAEE I++MP+ DA++W +LLSA
Sbjct: 376 KAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSA 435
Query: 576 CWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
C N+E+ +RAA+ + LD YV+LSNIYA ++ + M+ R + +++K+P
Sbjct: 436 CRKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEP 495
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
GCS IE+N +H F R +P +Y+ L L
Sbjct: 496 GCSLIEVNGEIHEFVAGGRLHPQAQEVYSLLNEL 529
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 216/429 (50%), Gaps = 22/429 (5%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
K++A +T + + L VS A G + A +F Q+ + SWNT++ G+S+
Sbjct: 42 KIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQIHSPNLFSWNTIIRGFSQ 101
Query: 62 WAKFDESLSL-VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ ++SL + + S+V+ + T+ ++ AQL G Q+H V+K G + F
Sbjct: 102 SSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHYGAQLHGRVIKLGLQFDPF 161
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
+ + +++ YANC + E + F E + + + W+ M++G +C + ++ +F +MP ++
Sbjct: 162 IRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKCGEVDESRKLFDEMPLRN 221
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
V W +ISGY ++ +AL LF M+E P+E+T S++ A ARLGA +G+ +
Sbjct: 222 TVSWNSMISGYVRN-GRLREALDLFGQMQEE-RIKPSEFTMVSLLNASARLGALKQGEWI 279
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
H + K FE + + ++I+ YC C + A +V++ L++ N++I GL G
Sbjct: 280 HDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNTMILGLAMNGCE 339
Query: 301 EDAELIFNRLTEAN----SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+A +F+RL +N +++ ++ G VD +K F +++S
Sbjct: 340 NEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYF------------SLMSKT 387
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
++E + ++ M+ + L E+A +L +R + ++ +S L AC G+++
Sbjct: 388 YKIEPSIKHYSCMVDTLGRAGLLEEAEEL---IRNMPVNPDAIIWSSLLSACRKHGNVEL 444
Query: 417 GQLLHAHLV 425
+ H+V
Sbjct: 445 AKRAAKHIV 453
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM--YSRCGSINDAQASFSS 458
S+L C+ + LQ+ +HAHL+KT + + ++ S G IN A F+
Sbjct: 27 LSILEKHCTTMKDLQK---IHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQ 83
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
I SPN+ +W ++ G+S A+ LF ++++ + P+ T+ V A + GL +
Sbjct: 84 IHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHY 143
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA-EEFIKDMPIELDAVVWGALL 573
G ++ + G+ ++ + G L E + F + M + D V W +++
Sbjct: 144 GAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERM--DFDIVAWNSMI 198
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 195/632 (30%), Positives = 298/632 (47%), Gaps = 85/632 (13%)
Query: 48 TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV---KLNETTFSTILSVCAQLNSLIDGK 104
+ SWN + G+S+ ES L M R + + T+ + VCA L G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 105 QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
I VLK E V + + +A+C ++E A++V
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKV----------------------- 213
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
F + P +D+V W LI+GY K + EKA+ +++ M G P++ T +
Sbjct: 214 --------FDESPVRDLVSWNCLINGY-KKIGEAEKAIYVYKLMESEGVK-PDDVTMIGL 263
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+ +C+ LG GK + + + G + AL++ + C
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKC------------------ 305
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
G I +A IF+ L + +S+ +MI GYA G +D S++LF+ M
Sbjct: 306 -------------GDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDME-- 350
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
E++ V WN+MI G VQ + AL L+ M+ T
Sbjct: 351 ---------------EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHC 395
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
ACS LG+L G +H ++ K NV +GTSLVDMY++CG+I++A + F I + N
Sbjct: 396 LSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNS 455
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
+TA++ G + HG S A+ F M++ I P+ TF+G+LSAC G++ G F
Sbjct: 456 LTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQ 515
Query: 525 MKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
MKS + + P L+HY+ +VDLLGR+G L EA+ ++ MP+E DA VWGALL C N+E
Sbjct: 516 MKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVE 575
Query: 584 VGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELN 643
+GE+AA+K+ LD YV+L +Y W R+ + V+K PGCS IE+N
Sbjct: 576 LGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVN 635
Query: 644 SRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
V F V D++ P IY L L ++ S
Sbjct: 636 GIVCEFIVRDKSRPESEKIYDRLHCLGRHMRS 667
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 210/428 (49%), Gaps = 26/428 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD+ P+R +VSWN ++ GY K + ++++ + M VK ++ T ++
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S C+ L L GK+ + V ++G + + L+ ++ C +I EA+R+FD L + +
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY +C L+ + +F M +KDVV+W +I G ++ G + AL LF+ M+ S
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG-QDALALFQEMQTS 383
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T + AC++LGA G +H + K + ++G +L++ Y C
Sbjct: 384 NTK-PDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 442
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAV 327
A+ V+ ++ ++I GL G A FN + +A + I++ ++
Sbjct: 443 ALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCH 502
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G + + F +M R +LN P+++ ++ M+ + L E+A +L
Sbjct: 503 GGMIQTGRDYFSQMKSR--FNLN------PQLKH----YSIMVDLLGRAGLLEEADRL-- 548
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVD-MYSR 445
M + ++ + + L C G+++ G+ L++ P +S +YV L+D MY
Sbjct: 549 -MESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYV---LLDGMYGE 604
Query: 446 CGSINDAQ 453
DA+
Sbjct: 605 ANMWEDAK 612
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 139/339 (41%), Gaps = 68/339 (20%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
++ IVS I+ R G L +R LFD M + VV WN M+ G + + ++L+L
Sbjct: 319 EKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQ 378
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M SN K +E T LS C+QL +L G IH + K +G+ L+ YA C
Sbjct: 379 EMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCG 438
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
I EA VF + N L +T +I G A
Sbjct: 439 NISEALSVFHGIQTRNSL-------------------------------TYTAIIGGLAL 467
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
D A+ F M ++G P+E TF ++ AC HG +I+ G ++
Sbjct: 468 HGDA-STAISYFNEMIDAG-IAPDEITFIGLLSACC-----------HGGMIQTGRDY-- 512
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-E 312
F ++ NP L + +++ L G +E+A+ + + E
Sbjct: 513 ---------------FSQMKSRFNL--NPQLKHYSIMVDLLGRAGLLEEADRLMESMPME 555
Query: 313 ANSISYNSMIKGYAVYGQVD----DSKRLFEKMPHRSII 347
A++ + +++ G ++G V+ +K+L E P S I
Sbjct: 556 ADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 594
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 187/597 (31%), Positives = 299/597 (50%), Gaps = 53/597 (8%)
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
T+F + Q + K++H ++ +G L+ YA C E ++VFDE
Sbjct: 19 TSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDE 78
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ + N + +++M+ YV + D VF +M V+G
Sbjct: 79 MSDRNVVFYNVMIRSYVNNHRYDDGLLVFREM------------------VNGG------ 114
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
FR P+ YT+ V++AC+ G ++HG ++K G +F+ +G LI Y
Sbjct: 115 FR---------PDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYG 165
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG 324
C A RV+D + + + NS++ G R +DA I + +
Sbjct: 166 KCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMED------------ 213
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMI---SVIPEMER-NPVTWNSMISGYVQNNLHE 380
YGQ D + MP + S ++ + +ER N ++WN MI Y++N+L
Sbjct: 214 ---YGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPT 270
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+A+ LY+ M K ++ TF+ + AC L +L G+ +H ++ K N+ + SL+
Sbjct: 271 QAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLI 330
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
DMY+RCG ++DA+ F + +VA+WT+L++ Y G G AV LF ML P++
Sbjct: 331 DMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSI 390
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
FV +LSAC +GL++EG F+ M Y + P +EHY C+VDLLGR+G + EA IK
Sbjct: 391 AFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQ 450
Query: 560 MPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKK 619
MPIE + VW LLS+C + NM++G AA + L + YV+LSNIYA G+W +
Sbjct: 451 MPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEV 510
Query: 620 MDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+IR + +++K PG S +ELN++VH F D ++P IY L L A + +
Sbjct: 511 TEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKEL 567
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 208/475 (43%), Gaps = 66/475 (13%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
+L + ++ CG G R +FD+M R VV +N M+ Y ++D+ L + M
Sbjct: 54 SLGIKLMRSYAACGEPG---LTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREM 110
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ + T+ +L C+ +L G IH VLK G + FVG+GL+ Y C +
Sbjct: 111 VNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCL 170
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD------------------------ 171
EA+RVFDE+ + + W+ M+ GY DA +
Sbjct: 171 FEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAV 230
Query: 172 -------------VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
+F+ + +K+++ W +I Y K+ +A+ L+ M E P+
Sbjct: 231 ANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKN-SLPTQAVDLYLQM-EKCRVEPDA 288
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
TF SV+ AC L A G+ +H + K + + +LI+ Y C D A RV+DR
Sbjct: 289 ITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDR 348
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDS 334
++ + + SLI+ G+ +A +F + + +SI++ +++ + G +D+
Sbjct: 349 MKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEG 408
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM-ISGYVQNNLHEKALQLYMTMRKLA 393
+ F++M I+ P +E + + +G V + Y ++++
Sbjct: 409 RIYFKQMTDDYRIT--------PRIEHYACLVDLLGRAGRVD--------EAYNIIKQMP 452
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCG 447
I+ ++ L +C ++ G L +L++ P +S YV L ++Y++ G
Sbjct: 453 IEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYV--LLSNIYAKAG 505
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 1/206 (0%)
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
I + ++F +L A ++ + LH + N +G L+ Y+ CG +
Sbjct: 14 IQQILTSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTR 73
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F +S NV + ++ Y ++ + +L+F M+ P+ T+ VL AC +
Sbjct: 74 KVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSE 133
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G+ I + G+ L ++ + G+ G L EA +M I D V W +++
Sbjct: 134 NLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEM-IWKDVVSWNSMV 192
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKP 599
+ M + ++M +KP
Sbjct: 193 AGYAHNMRFDDALEICREMEDYGQKP 218
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 191/603 (31%), Positives = 295/603 (48%), Gaps = 83/603 (13%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNETTFSTILSVCAQLNSLIDGKQIH 107
V SWN + GY + + L M +K + T+ +L C S G +
Sbjct: 122 VFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVL 181
Query: 108 CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
VLK G+EC FV + + +C E +S
Sbjct: 182 GHVLKFGFECDIFVHNASITMLLSCGE-------------------------------LS 210
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
A+DVF K +D+V W +I+G K E A+K+++ M E+ + PNE T +I +
Sbjct: 211 VAYDVFNKSRVRDLVTWNSMITGCVKRGLAIE-AIKIYKEM-EAEKVRPNEITMIGMISS 268
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
C+++ GK H + + G EF + AL++ Y C
Sbjct: 269 CSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKC--------------------- 307
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
G + A ++F+ + + +S+ +M+ GYA +G +D ++ + K+P +S+
Sbjct: 308 ----------GELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSV- 356
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
V WN++ISG VQ ++AL L+ M+ I+ + T A
Sbjct: 357 ----------------VPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSA 400
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CS LG+L G +H ++ + +V +GT+LVDMY++CG+I A F I N W
Sbjct: 401 CSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTW 460
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
TA++ G + HG +A+ F M+ IVP+ TF+GVLSAC GLV EG K F M S
Sbjct: 461 TAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSS 520
Query: 528 -YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+ V P L+HY+C+VDLLGR+GHL EAEE +K+MP+ DA V GAL AC + N+++GE
Sbjct: 521 KFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGE 580
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
R A K+ +D + YV+L+++Y+ W + RK + V+K PGCS +E+N V
Sbjct: 581 RTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIV 640
Query: 647 HAF 649
H F
Sbjct: 641 HEF 643
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 218/440 (49%), Gaps = 26/440 (5%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +IT G+L A ++F++ +R +V+WN+M+ G K E++ + M V+
Sbjct: 197 NASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVR 256
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
NE T ++S C+Q+ L GK+ HC + + G E + + L+ Y C E+ A+ +
Sbjct: 257 PNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVL 316
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD + + + W+ M++GY + + A ++ K+P+K VV W +ISG ++ G E A
Sbjct: 317 FDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKE-A 375
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
L LF M+ P++ T + + AC++LGA G +H + + D ++G AL++
Sbjct: 376 LALFHEMQIRTIE-PDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVD 434
Query: 262 FYCGCEAFDGAMRVYDRL-ENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSI 316
Y C A++V++ + + CL + ++I GL G +DA F+++ + I
Sbjct: 435 MYAKCGNIARALQVFEEIPQRNCLTWT-AVICGLALHGNAQDALSYFSKMIHIGIVPDEI 493
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
++ ++ G V++ ++ F +M + +V P+++ ++ M+ +
Sbjct: 494 TFLGVLSACCHGGLVEEGRKYFSEMSSK--------FNVSPKLKH----YSCMVDLLGRA 541
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYV 435
E+A +L M +A D + LF AC G++Q G+ L++ P +S YV
Sbjct: 542 GHLEEAEELVKNM-PMAAD--AAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYV 598
Query: 436 GTSLVDMYSRCGSINDAQAS 455
L MYS +A+++
Sbjct: 599 --LLASMYSEAKMWKEARSA 616
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 100/255 (39%), Gaps = 64/255 (25%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-------- 66
E I TN + + G+L+TAR LFD M +T+VSW TM+ GY+++ D
Sbjct: 291 EFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYK 350
Query: 67 -----------------------ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
E+L+L M ++ ++ T LS C+QL +L G
Sbjct: 351 IPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVG 410
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
IH + + +G+ L+ YA C I A +VF+E+ + N L W+ ++ G
Sbjct: 411 IWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALH 470
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
DA F KM +V P+E TF
Sbjct: 471 GNAQDALSYFSKMIHIGIV---------------------------------PDEITFLG 497
Query: 224 VIRACARLGAFCEGK 238
V+ AC G EG+
Sbjct: 498 VLSACCHGGLVEEGR 512
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 43/254 (16%)
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHAC-----SCLGS 413
E N +WN+ I GYV++ E LY M + T+ +L C SCLG
Sbjct: 119 ELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGL 178
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
G H++K FE +++V + + M CG ++ A F+ ++ W +++ G
Sbjct: 179 GVLG-----HVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITG 233
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV--- 530
GL EA+ +++ M + + PN T +G++S+C + +N G + +K +G+
Sbjct: 234 CVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFT 293
Query: 531 VP----------------------------TLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+P TL +T +V R G L A E + +P
Sbjct: 294 IPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIP- 352
Query: 563 ELDAVVWGALLSAC 576
E V W A++S C
Sbjct: 353 EKSVVPWNAIISGC 366
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 189/613 (30%), Positives = 306/613 (49%), Gaps = 62/613 (10%)
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++L C Q++ GK+IH VLK G + FVG+ L+ Y C +E A+ VFD
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD----- 153
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
KM ++DVV W+ +I +++ + + AL+L R M
Sbjct: 154 --------------------------KMMERDVVSWSTMIRSLSRNKE-FDMALELIREM 186
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG----GALIEFYC 264
+ P+E S++ A GK +H +I+ +E +G AL++ Y
Sbjct: 187 NFM-QVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRN--SNNEHMGVPTTTALLDMYA 243
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNS 320
C A ++++ L + + ++I G I R+E+ +F R+ E N I+ S
Sbjct: 244 KCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLS 303
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERN 362
+I G + K+L + + + + +M R+
Sbjct: 304 LIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRD 363
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
+ W +M+S Y Q N ++A L+ MR + T+ T L C+ G+L G+ +H+
Sbjct: 364 VMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHS 423
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
++ K E + + T+LVDMY++CG IN A F S ++ W A++ G++ HG G E
Sbjct: 424 YIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEE 483
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVV 541
A+ +F M Q + PN TF+G+L AC AGLV EG K+F M ++G+VP +EHY C+V
Sbjct: 484 ALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMV 543
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
DLLGR+G L EA E IK MPI+ + +VWGAL++AC N ++GE AA ++ ++ +
Sbjct: 544 DLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCG 603
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNV 661
V++SNIYA +W +RK + + +KK+PG S IE+N VH F + D+++P
Sbjct: 604 YNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRR 663
Query: 662 IYATLEHLTANLN 674
I L + LN
Sbjct: 664 INEMLAEMRRKLN 676
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 207/469 (44%), Gaps = 63/469 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR +FD+M R VVSW+TM+ S+ +FD +L L+ M+ V+ +E +++++ A
Sbjct: 148 ARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFAD 207
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVG----SGLLFFYANCFEIEEAKRVFDELHEDNELL 152
++ GK +H V+++ E +G + LL YA C + A+++F+ L + +
Sbjct: 208 TANMRMGKAMHAYVIRNSNN--EHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS 265
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
W+ M+ G ++ N + + +FI+M ++++
Sbjct: 266 WTAMIAGCIRSNRLEEGTKLFIRMQEENI------------------------------- 294
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
PNE T S+I C GA GK +H +++ GF ++ AL++ Y C A
Sbjct: 295 --FPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNA 352
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVY 328
++D +N + ++++ I+ A +F+++ ++ S++ AV
Sbjct: 353 RALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVA 412
Query: 329 GQVDDSKRLFEKMPHRSI---ISLNTMIS---------------VIPEMERNPVTWNSMI 370
G +D K + + + LNT + I + R+ WN++I
Sbjct: 413 GALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAII 472
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PF 429
+G+ + E+AL ++ M + + TF L HACS G + +G+ L +V T
Sbjct: 473 TGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGL 532
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
+ +VD+ R G +++A S+ PN W AL+ H
Sbjct: 533 VPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 581
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 192/443 (43%), Gaps = 54/443 (12%)
Query: 15 ETLIVSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
E + V T A+ + + G L AR LF+ + +TVVSW M+ G + + +E L
Sbjct: 228 EHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFI 287
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M N+ NE T +++ C +L GKQ+H +L++G+ + + L+ Y C
Sbjct: 288 RMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCS 347
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+I A+ +FD + ++W+ ML Y Q N + AF+
Sbjct: 348 DIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFN---------------------- 385
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
LF MR SG P + T S++ CA GA GK VH + K E D
Sbjct: 386 ----------LFDQMRTSGVR-PTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDC 434
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL--- 310
+ AL++ Y C + A R++ + + N++I G G E+A IF +
Sbjct: 435 ILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQ 494
Query: 311 -TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ N I++ ++ + G V + K+LFEKM H ++P++E + M
Sbjct: 495 GVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVH--------TFGLVPQIEH----YGCM 542
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ + L ++A ++ ++ + I + L AC + Q G+L L++
Sbjct: 543 VDLLGRAGLLDEAHEM---IKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEP 599
Query: 430 ESNVYVGTSLVDMYSRCGSINDA 452
E+ Y + ++Y+ +DA
Sbjct: 600 ENCGY-NVLMSNIYAAANRWSDA 621
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/505 (32%), Positives = 279/505 (55%), Gaps = 36/505 (7%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y +C M +A VF +P +V W LI+G+ + C KA+++ M+E+G PNE
Sbjct: 18 YTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQE-GSCAKAVEVLSLMQEAGFE-PNEV 75
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T+ +++ +C + + + + + + L+ YC E + ++ R+
Sbjct: 76 TYSNLLASCIKARDVHSARAMFDKISRPSV----TTWNTLLSGYCQEEQHQDTIELFRRM 131
Query: 280 ENPCLNASNSLIN---------GLISMGR-IEDAELIFNRLTEANSISYNSMIKGYAVYG 329
++ + + + G++ GR + A + F L + + ++ Y+ G
Sbjct: 132 QHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRF--LLHNDMFVASGLVDMYSKCG 189
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
Q+ ++ +F KM ER+ V WNS+ISG ++L+++A + M
Sbjct: 190 QIGIARSIFNKM-----------------TERDVVCWNSIISGLTIHSLNKEAFDFFKQM 232
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
R+ I T S+++ + ++CS L S+ G+ +HA ++K ++ NVYVG++L+DMY++CG++
Sbjct: 233 RENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNM 292
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+DA+ F ++ N+ AW +++GY+ +GLG +AV LFE ML + P+A TF+ VL+ C
Sbjct: 293 DDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGC 352
Query: 510 VRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
+GLV++ M F SM+ SYG++P EHYTC++D LGR+G E E I MP + D ++
Sbjct: 353 SHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPII 412
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W LL+AC N E+G+ AA+ +F +D K S YV+LSNIYA LG+ G +R +++
Sbjct: 413 WEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSN 472
Query: 629 LEVKKDPGCSWIELNSRVHAFSVED 653
V K G SWI+ V AF V D
Sbjct: 473 RGVVKGRGYSWIDQKDGVRAFMVAD 497
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 173/371 (46%), Gaps = 77/371 (20%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V+ + + C + + +AR +FD++ +V +WNT+L GY + + +++ L M
Sbjct: 75 VTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQ 134
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
NV+ + TT + ILS C++L L G+Q+H ++ FV SGL+ Y+ C +I A
Sbjct: 135 NVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIA 194
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +F+++ E + + W+ ++ G +L +AFD
Sbjct: 195 RSIFNKMTERDVVCWNSIISGLTIHSLNKEAFD--------------------------- 227
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
F+ MRE+G MP E ++ S+I +C+RL + G+ +H ++K G++ + +G A
Sbjct: 228 -----FFKQMRENGI-MPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSA 281
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
LI+ Y C G ++DA L F+ + N +++
Sbjct: 282 LIDMYAKC-------------------------------GNMDDARLFFDTMMMKNIVAW 310
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N MI GYA G D + LFE M + E + + VT+ ++++G + L
Sbjct: 311 NEMIHGYAQNGLGDKAVELFEYM-------------LTTEQKPDAVTFIAVLTGCSHSGL 357
Query: 379 HEKALQLYMTM 389
+KA+ + +M
Sbjct: 358 VDKAMAFFNSM 368
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 171/375 (45%), Gaps = 60/375 (16%)
Query: 248 GFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF 307
GF D+ +G +LI+ Y C D A++V++ L + +
Sbjct: 3 GFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTI----------------------- 39
Query: 308 NRLTEANSISYNSMIKGYAVYG--------------------QVDDSKRLFEKMPHRSII 347
+S+N +I G+ G +V S L + R +
Sbjct: 40 --------VSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVH 91
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
S M I + TWN+++SGY Q H+ ++L+ M+ + R+T +V+ +
Sbjct: 92 SARAMFDKIS--RPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSS 149
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CS LG L G+ +H+ V+ ++++V + LVDMYS+CG I A++ F+ ++ +V W
Sbjct: 150 CSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCW 209
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
++++G + H L EA F+ M E I+P +++ ++++C R + G +I +
Sbjct: 210 NSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMK 269
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
G + + ++D+ + G++ +A F M ++ + V W ++ + +G++
Sbjct: 270 DGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMK-NIVAWNEMIHG---YAQNGLGDK 325
Query: 588 AA---QKMFGLDKKP 599
A + M ++KP
Sbjct: 326 AVELFEYMLTTEQKP 340
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
GQ+ AR++F++M R VV WN+++ G + + E+ M + + E+++++++
Sbjct: 189 GQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMI 248
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ C++L+S+ G+QIH V+K GY+ +VGS L+ YA C +++A+ FD + N +
Sbjct: 249 NSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIV 308
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
W+ M+ GY Q L A ++F M K D V + +++G + S +KA+ F
Sbjct: 309 AWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHS-GLVDKAMAFFNS 367
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCE 236
M S +P + +I A R G F E
Sbjct: 368 MENSYGIIPLAEHYTCLIDALGRAGRFVE 396
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 163/422 (38%), Gaps = 102/422 (24%)
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ--------- 162
+ G+ + VG+ L+ Y C E++EA +VF+ L + W++++ G+ Q
Sbjct: 1 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60
Query: 163 -----------------CNLMSD---AFDV------FIKMPKKDVVVWTKLISGYAKSVD 196
NL++ A DV F K+ + V W L+SGY + +
Sbjct: 61 VLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQE-E 119
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
+ ++LFR M+ P+ T ++ +C++LG G+ VH ++ D +
Sbjct: 120 QHQDTIELFRRMQHQNVQ-PDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVA 178
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
L++ Y C A +++++ + NS+I+GL ++A F ++ E N I
Sbjct: 179 SGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRE-NGI 237
Query: 317 -----SYNSMIKG-----------------------------------YAVYGQVDDSKR 336
SY SMI YA G +DD++
Sbjct: 238 MPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARL 297
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
F+ M M +N V WN MI GY QN L +KA++L+ M
Sbjct: 298 FFDTM-----------------MMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKP 340
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKT----PFESNVYVGTSLVDMYSRCGSINDA 452
TF + CS G + + + + P + T L+D R G +
Sbjct: 341 DAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHY---TCLIDALGRAGRFVEV 397
Query: 453 QA 454
+A
Sbjct: 398 EA 399
>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
Length = 867
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 199/692 (28%), Positives = 341/692 (49%), Gaps = 94/692 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +FD + + VVSWN M+ G ++ E+ SL S M + +VK N T + IL VCA
Sbjct: 195 AYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCAS 254
Query: 97 LNSLID---GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
+ I G+QIH VL+ + EL D +
Sbjct: 255 FDENIAHRCGRQIHSYVLQ-----------------------------WPELSADVSVCN 285
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+L L Y++ +A +F M +D+V W +I+GYA + + K+L +F +
Sbjct: 286 AL-LSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWL-KSLHVFGNLVSLEM 343
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF-DESIGGALIEFYCGCEAFDGA 272
+ + T S++ ACA+L GK VH +++ F F D S G AL+ FY C + A
Sbjct: 344 LLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEA 403
Query: 273 MRVYDRLENPCLNASNSLINGL-----------------------------------ISM 297
+ + L + NS+++ S+
Sbjct: 404 YHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASL 463
Query: 298 GRIEDAELIFNRLTEANSI-------SYNSMIKGYAVYGQVDDSKRLFEKMPH-RSIISL 349
R++ + I + S+ N+++ Y+ G ++ + ++F+ + R++++
Sbjct: 464 LRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTC 523
Query: 350 NTMIS-------------VIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
N++IS + M E + TWN M+ Y +N+ E+AL+L++ ++ +
Sbjct: 524 NSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMK 583
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
T L C+ + S+ + H +++++ FE ++++ +L+D Y++CG I A
Sbjct: 584 PDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE-DLHLKGTLLDAYAKCGIIGYAYKI 642
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F S ++ +TA++ GY+ HG+ +A+ F ML I P+ F +LSAC AG +
Sbjct: 643 FQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRI 702
Query: 516 NEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
EG+KIF S+ K +G+ PT+E + CVVDLL R GH+ EA F+ +PIE +A +WG LL
Sbjct: 703 AEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANANIWGTLLG 762
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
AC + +E+G A K+F ++ I Y++LSN+YA +W M++RK + + ++KK
Sbjct: 763 ACKTYHEVELGRIVADKLFKIEANDIGNYIVLSNLYAADDRWDGVMEVRKMMRNKDLKKP 822
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
GCSWIE+ + F V D ++P N+IY+TL
Sbjct: 823 AGCSWIEVERTNNIFVVGDCSHPQRNLIYSTL 854
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 140/574 (24%), Positives = 257/574 (44%), Gaps = 88/574 (15%)
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
K + + IL C+ L + GK +H V+K G+ LL YA
Sbjct: 34 KPDHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMYA---------- 83
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+C ++ D +F + + D V+W ++SGY++S
Sbjct: 84 ---------------------KCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDAD 122
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
+K+FR M SGE MP+ T +V+ CAR G GK VHG +IK GFE D G AL+
Sbjct: 123 VMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALV 182
Query: 261 EFY--CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
Y CG A D A V+D + + + + N++I GL G +++A +F+ + +
Sbjct: 183 SMYAKCGLVACD-AYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKG----- 236
Query: 319 NSMIKGYAVYGQVDDSKRLF-EKMPHRSIISLNTMISVIPEME----------------- 360
S+ YA + F E + HR +++ + PE+
Sbjct: 237 -SVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVG 295
Query: 361 --------------RNPVTWNSMISGYVQNNLHEKALQLY---MTMRKLAIDRTRSTFSV 403
R+ V+WN++I+GY N K+L ++ +++ L +D T
Sbjct: 296 RTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSV--TMVS 353
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFE-SNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ AC+ L +LQ G+ +HA++++ PF + G +LV Y++CG I +A +FS IS
Sbjct: 354 ILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRK 413
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC---VRAGLVNE-- 517
++ +W ++++ + S + L +ML+ DI P++ T + ++ C +R V E
Sbjct: 414 DLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIH 473
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
G I PT+ + ++D + G++ A + +++ + + V +L+S
Sbjct: 474 GYSIRSGSLLCATAPTVGN--AILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISG-- 529
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
++ + A G+ + ++ + ++ +YA
Sbjct: 530 -YVGLGSHYDANMIFSGMSETDLTTWNLMVRVYA 562
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 185/413 (44%), Gaps = 26/413 (6%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N ++ + G + A + F + + ++SWN++L + + LSL+ M + +++
Sbjct: 388 NALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIR 447
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY---ECFEFVGSGLLFFYANCFEIEEA 138
+ T TI+ CA L + K+IH ++SG VG+ +L Y+ C IE A
Sbjct: 448 PDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYA 507
Query: 139 KRVFDELHEDNELLWSLMLV-GYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
++F L E L+ L+ GYV DA +F M + D+ W ++ YA++ D
Sbjct: 508 NKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAEN-DC 566
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E+AL+LF ++ G P+ T S+I C ++ + + HG +I+ FE D + G
Sbjct: 567 PEQALELFLKLQTQGMK-PDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE-DLHLKG 624
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEA 313
L++ Y C A +++ + L ++I G G E A F+ + +
Sbjct: 625 TLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKP 684
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
+ + + S++ + G++ + ++F+ S+ + + P +E+ + + G
Sbjct: 685 DHVIFTSILSACSHAGRIAEGLKIFD--------SIEKIHGMKPTIEQFACVVDLLARG- 735
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+ Y + K+ I+ + + L AC ++ G+++ L K
Sbjct: 736 ------GHVSEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFK 782
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 158/350 (45%), Gaps = 65/350 (18%)
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
++ +++ YA G +DD +LF++ +PV WN ++SGY +
Sbjct: 73 VTSKALLNMYAKCGMLDDCHKLFDQFG-----------------RCDPVIWNIVLSGYSR 115
Query: 376 NNLHE-KALQLYMTMRKLA-IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
+ ++ ++++ M + + T + + C+ G+L G+ +H +++K+ FE +
Sbjct: 116 SGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDT 175
Query: 434 YVGTSLVDMYSRCGSIN-DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
+ G +LV MY++CG + DA A F SI +V +W A++ G + +GL EA LF +M++
Sbjct: 176 FAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMK 235
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ PN AT +L C +E + + C GR H
Sbjct: 236 GSVKPNYATVANILPVCAS---FDENIA----------------HRC-----GRQIH--- 268
Query: 553 AEEFIKDMP-IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
++ P + D V ALLS F++ + + A + +D + + ++ + YA
Sbjct: 269 --SYVLQWPELSADVSVCNALLS---FYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYA 323
Query: 612 VLGKWGKKMDIRKRLTHLE---------VKKDPGCSW---IELNSRVHAF 649
+ G+W K + + L LE V P C+ ++ +VHA+
Sbjct: 324 LNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAY 373
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 12/220 (5%)
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRK--LAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+TW S I ++ H +AL + K A + + +CS L + G+ LH
Sbjct: 1 MTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLH 60
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
+++VK S +L++MY++CG ++D F + W +++GYS G
Sbjct: 61 SYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKND 120
Query: 482 EAVL-LFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT- 538
V+ +F M +++P++ T VL C R+G +N G +S+ Y + E T
Sbjct: 121 ADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGG----KSVHGYVIKSGFEMDTF 176
Query: 539 ---CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+V + + G + + D I D V W A+++
Sbjct: 177 AGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAG 216
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 19/281 (6%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
YA + ++++ +V+ N I+ G A +F M + +WN M+ Y++
Sbjct: 506 YANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAEND 565
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS 123
+++L L + +K + T +++ VC Q+ S+ +Q H +++S +E G+
Sbjct: 566 CPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFEDLHLKGT 625
Query: 124 GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKK 179
LL YA C I A ++F + + ++++ M+ GY + A + F M K
Sbjct: 626 -LLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKP 684
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
D V++T ++S + + E LK+F + + P F V+ AR G E
Sbjct: 685 DHVIFTSILSACSHAGRIAE-GLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEA-- 741
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
+ + K E + +I G L+ GA + Y +E
Sbjct: 742 -YSFVTKIPIEANANIWGTLL----------GACKTYHEVE 771
>gi|356545955|ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Glycine max]
Length = 667
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 191/640 (29%), Positives = 310/640 (48%), Gaps = 89/640 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS---NVKLNETTFSTIL-S 92
AR +FD P R +WN ML GYS + F +L+L + S N + T S +L +
Sbjct: 88 ARKVFDTTPHRNTFTWNAMLLGYSFNSMFRHALNLFGSFTFSTTPNASPDNFTISCVLKA 147
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
+ + S K++HCL+L+ G FV + L+ Y C E+ A+ VFD
Sbjct: 148 LASSFCSPELAKEVHCLILRRGLYSDIFVLNALITCYCRCDEVWLARHVFD--------- 198
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS--VDGCEKALKLFRWMRE 210
M ++D+V W +I GY++ D C++ L+ M
Sbjct: 199 ----------------------GMSERDIVTWNAMIGGYSQRRLYDECKR---LYLEMLN 233
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
PN T SV++AC + G +H + + G E D S+ A++ Y C
Sbjct: 234 VSAVAPNVVTAVSVMQACGQSMDLAFGMELHRFVKESGIEIDVSLSNAVVAMYAKC---- 289
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
GR++ A +F + E + ++Y ++I GY YG
Sbjct: 290 ---------------------------GRLDYAREMFEGMREKDEVTYGAIISGYMDYGL 322
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
VDD+ +F + + P + WN++ISG VQN E L M+
Sbjct: 323 VDDAMGVFRGVEN-------------PGLN----MWNAVISGMVQNKQFEGVFDLVRQMQ 365
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+ T + + + S +L+ G+ +H + ++ +E NVYV TS++D Y + G I
Sbjct: 366 GSGLSPNAVTLASILPSFSYFSNLRGGKEVHGYAIRRGYEQNVYVSTSIIDAYGKLGCIC 425
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A+ F S ++ WT++++ Y+ HG A+ L+ ML++ I P+ T VL+AC
Sbjct: 426 GARWVFDLSQSRSLIIWTSIISAYAAHGDAGLALGLYAQMLDKGIRPDPVTLTSVLTACA 485
Query: 511 RAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
+GLV+E IF SM S YG+ P +EHY C+V +L R+G L EA +FI +MPIE A VW
Sbjct: 486 HSGLVDEAWNIFNSMPSKYGIQPLVEHYACMVGVLSRAGKLSEAVQFISEMPIEPSAKVW 545
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
G LL + ++E+G+ A +F ++ + Y+I++N+YA GKW + ++R+R+ +
Sbjct: 546 GPLLHGASVFGDVEIGKFACDHLFEIEPENTGNYIIMANLYAHAGKWEQAGEVRERMKVI 605
Query: 630 EVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
++K G SWIE + + +F +D +N + IYA LE L
Sbjct: 606 GLQKIRGSSWIETSGGLLSFIAKDVSNGRSDEIYALLEGL 645
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 204/444 (45%), Gaps = 31/444 (6%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL-VSTMH 76
I N IT R ++ AR++FD M R +V+WN M+ GYS+ +DE L + ++
Sbjct: 174 IFVLNALITCYCRCDEVWLARHVFDGMSERDIVTWNAMIGGYSQRRLYDECKRLYLEMLN 233
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
S V N T +++ C Q L G ++H V +SG E + + ++ YA C ++
Sbjct: 234 VSAVAPNVVTAVSVMQACGQSMDLAFGMELHRFVKESGIEIDVSLSNAVVAMYAKCGRLD 293
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+ +F+ + E +E+ + ++ GY+ L+ DA VF + + +W +ISG ++
Sbjct: 294 YAREMFEGMREKDEVTYGAIISGYMDYGLVDDAMGVFRGVENPGLNMWNAVISGMVQNKQ 353
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E L R M+ SG + PN T S++ + + GK VHG I+ G+E + +
Sbjct: 354 -FEGVFDLVRQMQGSGLS-PNAVTLASILPSFSYFSNLRGGKEVHGYAIRRGYEQNVYVS 411
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL-------IFNR 309
++I+ Y GA V+D ++ L S+I+ + G DA L + ++
Sbjct: 412 TSIIDAYGKLGCICGARWVFDLSQSRSLIIWTSIISAYAAHG---DAGLALGLYAQMLDK 468
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ ++ S++ A G VD++ +F MP + I P +E + M
Sbjct: 469 GIRPDPVTLTSVLTACAHSGLVDEAWNIFNSMPSKYGIQ--------PLVEH----YACM 516
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-P 428
+ + +A+Q + ++ I+ + + L H S G ++ G+ HL + P
Sbjct: 517 VGVLSRAGKLSEAVQF---ISEMPIEPSAKVWGPLLHGASVFGDVEIGKFACDHLFEIEP 573
Query: 429 FESNVYVGTSLVDMYSRCGSINDA 452
+ Y+ + ++Y+ G A
Sbjct: 574 ENTGNYI--IMANLYAHAGKWEQA 595
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 140/364 (38%), Gaps = 83/364 (22%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS---------- 70
+N + + G+L AR +F+ M + V++ ++ GY + D+++
Sbjct: 279 SNAVVAMYAKCGRLDYAREMFEGMREKDEVTYGAIISGYMDYGLVDDAMGVFRGVENPGL 338
Query: 71 ---------------------LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCL 109
LV M S + N T ++IL + ++L GK++H
Sbjct: 339 NMWNAVISGMVQNKQFEGVFDLVRQMQGSGLSPNAVTLASILPSFSYFSNLRGGKEVHGY 398
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
++ GYE +V + ++ Y I A+ VFD +S +
Sbjct: 399 AIRRGYEQNVYVSTSIIDAYGKLGCICGARWVFD----------------------LSQS 436
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+ +++WT +IS YA D AL L+ M + G P+ T SV+ ACA
Sbjct: 437 ---------RSLIIWTSIISAYAAHGD-AGLALGLYAQMLDKGIR-PDPVTLTSVLTACA 485
Query: 230 RLGAFCEG-KVVHGLLIKCGFEFDESIGGALIEFY-CGCEAFDGAMRVYDRLE------- 280
G E + + + K G + L+E Y C A ++ + ++
Sbjct: 486 HSGLVDEAWNIFNSMPSKYGIQ-------PLVEHYACMVGVLSRAGKLSEAVQFISEMPI 538
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTE---ANSISYNSMIKGYAVYGQVDDSKRL 337
P L++G G +E + + L E N+ +Y M YA G+ + + +
Sbjct: 539 EPSAKVWGPLLHGASVFGDVEIGKFACDHLFEIEPENTGNYIIMANLYAHAGKWEQAGEV 598
Query: 338 FEKM 341
E+M
Sbjct: 599 RERM 602
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
S L H CS L+QG+ LHA L+ + ++ + L+ YS+ + A+ F +
Sbjct: 39 SALQH-CSDHRLLRQGKQLHARLILLSVTPDNFLASKLILFYSKSNHAHFARKVFDTTPH 97
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLF 487
N W A++ GYS + + A+ LF
Sbjct: 98 RNTFTWNAMLLGYSFNSMFRHALNLF 123
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 193/660 (29%), Positives = 322/660 (48%), Gaps = 78/660 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V+ N I R G + AR FD MP+RT S+N ++ GY + D +L L M
Sbjct: 17 VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ N+LI G + L + +
Sbjct: 77 RDL--------------GSYNALIAGLSLRRHTLPDAAAALASI------------PLPP 110
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+ F L L GYV+ L++DA +F +MP+++ V +T L+ G+ +
Sbjct: 111 SVVSFTSL-----------LRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDA-GR 158
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG- 256
+A KLF + MP++ V+ A L +C+ G + + FDE
Sbjct: 159 VNEARKLF-------DEMPDK----DVVARTAMLSGYCQA----GRITEARALFDEMPKR 203
Query: 257 -----GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
A+I Y A ++++ + + + +++ G I G +EDAE +FN +
Sbjct: 204 NVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMP 263
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
+ + N+M+ G+ +G VD +K +FE+M R+ TW++MI
Sbjct: 264 DHPVAACNAMMVGFGQHGMVDAAKAMFERM-----------------CARDDGTWSAMIK 306
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
Y QN +AL + M I ++F + C+ L + G+ LHA +++ F++
Sbjct: 307 VYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDT 366
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+V+ ++L+ MY +CG+++ A+ F+ +V W +++ GY+ HGLG EA+ +F+ +
Sbjct: 367 DVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLR 426
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHL 550
+ P+ T++GVL+AC G V EG +IF SM + + HY+C+VDLLGR+G +
Sbjct: 427 LARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLV 486
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
EA + I +MP+E DA++WGAL+ AC N E+ E AA+K+ L+ YV+LS+IY
Sbjct: 487 DEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIY 546
Query: 611 AVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED-RNNPNCNVIYATLEHL 669
G+W D+RK ++ + K PGCSWIE N VH F+ D ++P +I LE L
Sbjct: 547 TSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEEL 606
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 28/266 (10%)
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
P + A+N+ I L+ G IE A F+ + + SYN++I GY D + LF +M
Sbjct: 15 PAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRM 74
Query: 342 PHRSIISLNTMIS-------VIPE---------MERNPVTWNSMISGYVQNNLHEKALQL 385
P R + S N +I+ +P+ + + V++ S++ GYV++ L A++L
Sbjct: 75 PSRDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRL 134
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ M +R T++VL G + + + L + + +V T+++ Y +
Sbjct: 135 FHQMP----ERNHVTYTVLLGGFLDAGRVNEARKLFDEMP----DKDVVARTAMLSGYCQ 186
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
G I +A+A F + NV +WTA+++GY+ +G A LFE+M +++ V A VG
Sbjct: 187 AGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGY 246
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVV 531
++AG V + +F +M + V
Sbjct: 247 ----IQAGHVEDAEDLFNAMPDHPVA 268
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 49/92 (53%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T + + + IT + G L A+ +F+ + VV WN+M+ GY++ +E+L +
Sbjct: 365 DTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDD 424
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
+ + + + T+ +L+ C+ + +G++I
Sbjct: 425 LRLARMAPDGITYIGVLTACSYTGKVKEGREI 456
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 293/578 (50%), Gaps = 78/578 (13%)
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFY--ANCFEIEEAKRVFDELHEDNELLWSLMLVGYV 161
KQIH +K+G + LL F + EI+ A++ F ++H N W+ ++
Sbjct: 32 KQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCFSWNTII---- 87
Query: 162 QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTF 221
+ + + S++ AL F M G PN++TF
Sbjct: 88 -----------------RALADSDDDDLFHVNSLE----ALLYFSHMLTDGLVEPNKFTF 126
Query: 222 DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
V++ACA+L EGK +HG ++K G DE + L+ Y C GAM+
Sbjct: 127 PCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMC----GAMK------- 175
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLT-EANSISYNSMIKGYAVYGQVDDSKRLFEK 340
DA ++F + E N + +N MI GY G + S+ LF+
Sbjct: 176 --------------------DAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDS 215
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
MP++S++S WN MISG QN ++A++++ M+ + T
Sbjct: 216 MPNKSVVS-----------------WNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVT 258
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI- 459
+ A S LG+++ G+ +H K E + +G++L+DMYS+CGSI+ A F I
Sbjct: 259 LVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIR 318
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+ N W+A++ G + HG +A+ F M + + P+ ++GVLSAC AGLV EG
Sbjct: 319 NKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGR 378
Query: 520 KIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
I+ M + G++P +EHY C+VDLLGR+G L EAE+ I +MP++ D V+ ALL AC
Sbjct: 379 SIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKM 438
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
N+E+GER A+ + G +YV LSN++A G W + +R ++ L+++KDPGCS
Sbjct: 439 HGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCS 498
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
WIEL+ +H F VED ++P I++ LE ++ L SV
Sbjct: 499 WIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSV 536
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 203/417 (48%), Gaps = 32/417 (7%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-------ESLSLVSTMHRSN-VKLNETTFS 88
AR F Q+ SWNT++ + D E+L S M V+ N+ TF
Sbjct: 68 ARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFP 127
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH-E 147
+L CA+L + +GKQ+H V+K G EFV S L+ Y C +++A +F + E
Sbjct: 128 CVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLE 187
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
N +LW++M+ GYV+ + + ++F MP K VV W +ISG A++ ++A+++F
Sbjct: 188 GNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQN-GHFKEAIEMFHD 246
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M + G+ PN T SV+ A +RLGA GK VH K E D+ +G ALI+ Y C
Sbjct: 247 M-QLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCG 305
Query: 268 AFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMI 322
+ D A++V++ + N + +++I GL GR DA F R+ +A + + Y ++
Sbjct: 306 SIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVL 365
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
+ G V++ + ++ M ++ ++P +E + M+ + E+A
Sbjct: 366 SACSHAGLVEEGRSIYYHMV--------NIVGLLPRIEH----YGCMVDLLGRAGCLEEA 413
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTS 438
QL + M + L AC G+++ G+ + L+ P +S YV S
Sbjct: 414 EQLILNM---PVKPDDVILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALS 467
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G L +R LFD MP ++VVSWN M+ G ++ F E++ + M +V N T +
Sbjct: 202 RMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVS 261
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL-HED 148
+L ++L ++ GK +H K+ E + +GS L+ Y+ C I++A +VF+ + ++
Sbjct: 262 VLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKK 321
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
N + WS ++ G DA D F +M + V
Sbjct: 322 NPITWSAIIGGLAMHGRARDALDHFWRMQQAGV 354
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 16/201 (7%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY--SRCGSINDAQASFSSISS 461
LF S + + + +HAH +KT + L+ S I A+ FS I
Sbjct: 18 LFPQISRCKTTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHH 77
Query: 462 PNVAAWTALMNGYSH-------HGLGSEAVLLFEIMLEQDIV-PNAATFVGVLSACVRAG 513
PN +W ++ + H EA+L F ML +V PN TF VL AC +
Sbjct: 78 PNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLA 137
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ EG ++ + G+V + +V + G + +A +E + V+W ++
Sbjct: 138 RIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMI 197
Query: 574 SACWFWMNMEVGE-RAAQKMF 593
+ +G+ RA++++F
Sbjct: 198 DG-----YVRMGDLRASRELF 213
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 205/673 (30%), Positives = 319/673 (47%), Gaps = 62/673 (9%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV---KLNET 85
R L A LF++ P +TV WN +L Y K+ E+LSL M+ V + +
Sbjct: 47 ARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNY 106
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T S L C+ L L GK IH LK + FVGS L+ Y+ C +
Sbjct: 107 TVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDMFVGSALIELYSKCGQ----------- 154
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
M+DA VF + PK DVV+WT +I+GY ++ E AL F
Sbjct: 155 --------------------MNDAVKVFTEYPKPDVVLWTSIITGYEQN-GSPELALAFF 193
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M + P+ T S ACA+L F G+ VHG + + GF+ + +++ Y
Sbjct: 194 SRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGK 253
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSM 321
+ A ++ + + + +S++ G +A +FN + E N ++ S
Sbjct: 254 TGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISA 313
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI----------PE-----MERNP--- 363
++ A +++ K++ K+ L+ +S PE R P
Sbjct: 314 LRACASSSNLEEGKQI-HKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKD 372
Query: 364 -VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
V+W + SGY + + K+L ++ M + A S LG +QQ LHA
Sbjct: 373 VVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHA 432
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+ K+ F++N ++G SL+++Y++C SI++A F + +V W++++ Y HG G E
Sbjct: 433 FVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEE 492
Query: 483 AVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCV 540
A+ L M D+ PN TFV +LSAC AGL+ EG+K+F M Y ++P +EHY +
Sbjct: 493 ALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIM 552
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
VDLLGR G L +A + I +MP++ VWGALL AC N+++GE AA +F LD
Sbjct: 553 VDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHA 612
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
Y +LSNIY V W +R + +KK G S +E+ + VH+F DR + +
Sbjct: 613 GYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFIASDRFHGESD 672
Query: 661 VIYATLEHLTANL 673
IY L L A +
Sbjct: 673 QIYEMLRKLDARM 685
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 196/477 (41%), Gaps = 62/477 (12%)
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG--ENM 215
V Y + + A +F + P K V +W L+ Y E L LF M E
Sbjct: 44 VLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVE-TLSLFHQMNADAVTEER 102
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ YT +++C+ L GK++HG L K + D +G ALIE Y C + A++V
Sbjct: 103 PDNYTVSIALKSCSGLQKLELGKMIHGFLKK-KIDSDMFVGSALIELYSKCGQMNDAVKV 161
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS------------------ 317
+ P + S+I G G E A F+R+ +S
Sbjct: 162 FTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSD 221
Query: 318 ----------------------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
NS++ Y G + + LF +MP++ IIS
Sbjct: 222 FNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIIS------- 274
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
W+SM++ Y N AL L+ M I+ R T AC+ +L+
Sbjct: 275 ----------WSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLE 324
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+G+ +H V FE ++ V T+L+DMY +C S +A F+ + +V +W L +GY+
Sbjct: 325 EGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYA 384
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
G+ +++ +F ML P+A V +L+A G+V + + + + G
Sbjct: 385 EIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEF 444
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+++L + + A + K + D V W ++++A F E + + +M
Sbjct: 445 IGASLIELYAKCSSIDNANKVFKGLR-HTDVVTWSSIIAAYGFHGQGEEALKLSHQM 500
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 158/375 (42%), Gaps = 76/375 (20%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T + N + G+ G + A NLF +MP + ++SW++M+ Y+ +L+L +
Sbjct: 238 DTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNE 297
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++LN T + L CA ++L +GKQIH L + G+E V + L+ Y CF
Sbjct: 298 MIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFS 357
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
E A +F+ + + + + W+++ GY + + + VF M
Sbjct: 358 PENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNML----------------- 400
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
S P+ ++ A + LG + +H + K GF+ +E
Sbjct: 401 ----------------SNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEF 444
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
IG +LIE Y C + D A +V F L +
Sbjct: 445 IGASLIELYAKCSSIDNANKV-------------------------------FKGLRHTD 473
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
++++S+I Y +GQ +++ +L +M + S +++ N VT+ S++S
Sbjct: 474 VVTWSSIIAAYGFHGQGEEALKLSHQMSNHS------------DVKPNDVTFVSILSACS 521
Query: 375 QNNLHEKALQLYMTM 389
L E+ ++++ M
Sbjct: 522 HAGLIEEGIKMFHVM 536
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 8/183 (4%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
+ R L C S+ Q LH+ +K + +V T L +Y+R S+ A
Sbjct: 2 KRRDLLVKLLETCCSKISITQ---LHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKL 58
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV---PNAATFVGVLSACVRA 512
F V W AL+ Y G E + LF M + P+ T L +C
Sbjct: 59 FEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGL 118
Query: 513 GLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+ G I +K + + + +++L + G +++A + + P + D V+W ++
Sbjct: 119 QKLELGKMIHGFLKK-KIDSDMFVGSALIELYSKCGQMNDAVKVFTEYP-KPDVVLWTSI 176
Query: 573 LSA 575
++
Sbjct: 177 ITG 179
>gi|449460648|ref|XP_004148057.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Cucumis sativus]
Length = 696
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/677 (28%), Positives = 338/677 (49%), Gaps = 59/677 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK-WAKFDESLSLVSTMHRSNV 80
N ++ R G + ++ +F++MP R +VS+N ++ YS+ + +L+S M +
Sbjct: 46 NNILSMYARCGAIWESQKVFEKMPQRNLVSFNALIAAYSRSHGHAPLAFNLLSQMELEFL 105
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
K N T +++L + IH V+K G+ V + L+ Y++C ++E A +
Sbjct: 106 KPNSFTITSLLQAASFTEDPFWSSLIHAQVVKCGFVHDVRVQTALIGTYSHCLDLESAGK 165
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF W++ KDVV W +I G K D +
Sbjct: 166 VFR---------WTI----------------------DKDVVTWNTMIFGNLKH-DKLNE 193
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL+LF M G +P ++T+ ++ C R G + G+++HG +I D ++ L+
Sbjct: 194 ALRLFNQMLGIGL-IPTQFTYAMILNICCRNGDYLFGRLIHGRIITSNAIIDRTLQNVLL 252
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-----TEANS 315
+ YC C A +++R ENP L A N++I+G E A +F +L T+ +
Sbjct: 253 DLYCNCGDIHTAFCIFNRNENPDLVAWNTIISGCSENEEDEKAMKLFQQLKKSSLTKPDD 312
Query: 316 ISY-------NSMIKGYAVYGQVDDSKRLFE----------KMPHRSIISLNTMISVIPE 358
+Y ++++ G + QV K FE M R+ S +
Sbjct: 313 YTYAAVISTIDNLLSGMSFIAQV--IKDGFEGSVFISSVIVSMLFRNGESQAAARVFVTV 370
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
++ V W MISGY + EKA++ + M + + + S+ +C+ L +L+QG+
Sbjct: 371 AVKDVVLWTEMISGYSRIGEGEKAIKCFHQMHQNGHELDSFSLSLALSSCADLATLKQGE 430
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+ H+ +KT E+ +YV SL++MY++ G + AQ FS + P++ W +++ GYSHHG
Sbjct: 431 IFHSLAIKTGSEAEIYVLGSLINMYAKNGDLGSAQLIFSQVPCPDLKCWNSMLGGYSHHG 490
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
+A+ LF + + P+ TF+ +LSAC + V G ++ MK ++P +HY+
Sbjct: 491 NMEQALNLFFNLQNNGVKPDQVTFLSLLSACNHSNSVEIGQFLWNYMKECNIIPNSKHYS 550
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPI-ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
C+V LL +G + EAEE I P D +W LLS+C N+ VG AA+++ +D
Sbjct: 551 CMVSLLSGAGFMDEAEEMITKSPFANNDPELWRTLLSSCVVKKNLRVGVNAAKQVLRIDP 610
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+ +A+++LSN+YA GKW +++R+R+ V KDPG SWIE S++ +FS +++P
Sbjct: 611 EDSAAHILLSNLYAAAGKWDGVVEMRRRIREKMVGKDPGVSWIEAKSKIQSFSSGLQSHP 670
Query: 658 NCNVIYATLEHLTANLN 674
+ TL L N++
Sbjct: 671 EVDEALTTLLKLRGNMS 687
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 130/297 (43%), Gaps = 26/297 (8%)
Query: 288 NSLINGLISMGRIEDAE----LIFNRLTEANSISY---NSMIKGYAVYGQVDDSKRLFEK 340
++L+ IS+ ++ A LI + A+S+S N+++ YA G + +S+++FEK
Sbjct: 8 SALVQKCISVTSLKAARQLHALILTSIATASSLSPYVCNNILSMYARCGAIWESQKVFEK 67
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK-ALQLYMTMRKLAIDRTRS 399
MP +RN V++N++I+ Y +++ H A L M +
Sbjct: 68 MP-----------------QRNLVSFNALIAAYSRSHGHAPLAFNLLSQMELEFLKPNSF 110
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T + L A S L+HA +VK F +V V T+L+ YS C + A F
Sbjct: 111 TITSLLQAASFTEDPFWSSLIHAQVVKCGFVHDVRVQTALIGTYSHCLDLESAGKVFRWT 170
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+V W ++ G H +EA+ LF ML ++P T+ +L+ C R G G
Sbjct: 171 IDKDVVTWNTMIFGNLKHDKLNEALRLFNQMLGIGLIPTQFTYAMILNICCRNGDYLFGR 230
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
I + + + ++DL G +H A I + D V W ++S C
Sbjct: 231 LIHGRIITSNAIIDRTLQNVLLDLYCNCGDIHTA-FCIFNRNENPDLVAWNTIISGC 286
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 274/520 (52%), Gaps = 65/520 (12%)
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
VF ++P +I GY + +A+ ++ M G + P+ +TF S+ ++C
Sbjct: 34 VFNQIPNPTTFTCNSIIRGYTNK-NLPRQAILFYQLMMLQGLD-PDRFTFPSLFKSC--- 88
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGAMRVYDRLENPCLNASNS 289
G CEGK +H K GF D I L+ Y CGC
Sbjct: 89 GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC----------------------- 125
Query: 290 LINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
L+S A +F+++ + +S+ +MI YA + ++ +LF +M
Sbjct: 126 ----LVS------ARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRM-------- 167
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
E+ N WN MI+G+V+++ +E+AL L+ M+ + + T + L AC+
Sbjct: 168 --------EIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACT 219
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
LG+L+ G+ LH ++ K E +V +GT+LVDMY++CGSI A F + +V WTA
Sbjct: 220 HLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTA 279
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-Y 528
L+ G + G G +A+ LF M ++ P+A TFVGVL+AC AGLVNEG+ F SM + Y
Sbjct: 280 LIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKY 339
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P++EHY C+VD+LGR+G + EAE+ I++MP+ D V LLSAC N+ V ERA
Sbjct: 340 GIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERA 399
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
AQ++ LD K YV+LSNIY+ + W +R+ + +KK PGCS IE+ VH
Sbjct: 400 AQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHE 459
Query: 649 FSVEDRNNPNCNVIYATLEHLTANLNSV--------VLFD 680
F D ++P + IY TL+ + L S VLFD
Sbjct: 460 FVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFD 499
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 168/332 (50%), Gaps = 12/332 (3%)
Query: 20 STNKAITECG--RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
S +K + C +G L AR +F+Q+P T + N+++ GY+ +++ M
Sbjct: 12 SASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMML 71
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + TF ++ C L +GKQ+HC K G+ ++ + L+ Y+NC +
Sbjct: 72 QGLDPDRFTFPSLFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVS 128
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVD 196
A++VFD++ + + W+ M+ Y Q +L +A +F +M ++ W +I+G+ + D
Sbjct: 129 ARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSD 188
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E+AL LF M+ SG ++ T S++ AC LGA GK +H + K E D ++G
Sbjct: 189 -YEEALSLFNEMQLSGVK-GDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALG 246
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TE 312
AL++ Y C + + AMRV+ + + +LI GL G+ A +F+ + +
Sbjct: 247 TALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVK 306
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
++I++ ++ + G V++ F MP++
Sbjct: 307 PDAITFVGVLAACSHAGLVNEGIAYFNSMPNK 338
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
GS+ A+ F+ I +P +++ GY++ L +A+L +++M+ Q + P+ TF +
Sbjct: 26 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
+C G++ EG ++ G ++++ G L A + M +
Sbjct: 86 KSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKM-VNKSV 141
Query: 567 VVWGALLSACWFW 579
V W ++ A W
Sbjct: 142 VSWATMIGAYAQW 154
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/646 (28%), Positives = 302/646 (46%), Gaps = 80/646 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G A+ LFD +P + +T++ ++ +E++ L +++ +K + + F T+
Sbjct: 80 GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C K++H ++ G F+G+ L+ Y C +E A+R
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARR----------- 188
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRE 210
VF + KDVV WT + S Y G + L +F M
Sbjct: 189 --------------------VFDDLVVKDVVSWTSMSSCYVNC--GLPRLGLAVFCEMGW 226
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+G PN T S++ AC+ L G+ +HG ++ G + + AL+ Y C +
Sbjct: 227 NGVK-PNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLS-- 283
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
++ A L+F+ + + +S+N ++ Y +
Sbjct: 284 -----------------------------VKQARLVFDLMPHRDVVSWNGVLTAYFTNRE 314
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
D LF +M + + E + TWN++I G ++N EKA+++ M+
Sbjct: 315 YDKGLALFSQMSSKGV-------------EADEATWNAVIGGCMENGQTEKAVEMLRKMQ 361
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
L + T S ACS L SL+ G+ +H ++ + ++ T+LV MY++CG +N
Sbjct: 362 NLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLN 421
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
++ F I +V AW ++ + HG G E +LLFE ML+ I PN+ TF GVLS C
Sbjct: 422 LSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCS 481
Query: 511 RAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
+ LV EG++IF SM + + V P HY C+VD+ R+G LHEA EFI+ MP+E A W
Sbjct: 482 HSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAW 541
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
GALL AC + N+E+ + +A K+F ++ YV L NI W + + R +
Sbjct: 542 GALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKER 601
Query: 630 EVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
+ K PGCSW+++ RVH F V D+NN + IY L+ L + S
Sbjct: 602 GITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKS 647
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
P ++G L+ G AQ F +I P+ + L++ ++ GL +EA+ L+
Sbjct: 61 PTNIPSHLGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLY 120
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
+ + I P+ + F+ V AC +G + ++ G++ ++ G+
Sbjct: 121 ASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKC 180
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACW 577
+ A D+ ++ D V W + +S+C+
Sbjct: 181 KCVEGARRVFDDLVVK-DVVSWTS-MSSCY 208
>gi|297828249|ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
gi|297327846|gb|EFH58266.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
Length = 606
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/528 (34%), Positives = 281/528 (53%), Gaps = 60/528 (11%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+D +W +I ++ D +AL LF M E+G ++ ++++ V++AC+RLG G
Sbjct: 77 EDPFLWNAVIKSHSHGKDP-RQALLLFCLMLENGVSV-DKFSLSLVLKACSRLGFVKGGM 134
Query: 239 VVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
+HG L K G D + LI Y CGC F A +++DR+ + NS+ING +
Sbjct: 135 QIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGF--ARQMFDRMPQRDSVSYNSMINGYVK 192
Query: 297 MGRIEDAELIFN----------------------------------RLTEANSISYNSMI 322
G IE A +F+ + E + IS+NSMI
Sbjct: 193 CGLIESARELFDLMPREMKNLISWNSMISGYAQTSEGVNIASKLFAEMPEKDLISWNSMI 252
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEME-RNPVTWNS 368
GY +G+++D+K LF+ MP R +++ TMI ++ +M R+ V +NS
Sbjct: 253 DGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQMPLRDVVAYNS 312
Query: 369 MISGYVQNNLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
M++GYVQN H +AL+++ M K L+ D T T ++ A + LG L + +H ++V
Sbjct: 313 MMAGYVQNKCHMEALEIFNDMEKESHLSPDET--TLVIILSAIAQLGRLSKATDMHLYIV 370
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ F +G +L+DMYS+CGSI A F I + ++ W A++ G + HGLG A
Sbjct: 371 EKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAVHGLGESAFN 430
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
+ + I+P+ TFVGVL+AC +GLV EG+ F M + + + P L+HY C+VD+L
Sbjct: 431 MLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDIL 490
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
RSG + A+ I++MPIE + V+W L+AC E GE A+ + S+YV
Sbjct: 491 SRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYV 550
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
+LSN+YA G W +R + +++K PGCSWIEL+ RVH F V+
Sbjct: 551 LLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFVD 598
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 197/431 (45%), Gaps = 36/431 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+MP R VS+N+M+ GY K + + L M R L ++++++
Sbjct: 163 GCLGFARQMFDRMPQRDSVSYNSMINGYVKCGLIESARELFDLMPREMKNL--ISWNSMI 220
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S AQ + +G I + E + ++ Y IE+AK +FD + + +
Sbjct: 221 SGYAQTS---EGVNIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVV 277
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRE 210
+ M+ GY + + A +F +MP +DVV + +++GY + + C +AL++F M +
Sbjct: 278 TCATMIDGYAKLGFVHQAKTLFDQMPLRDVVAYNSMMAGYVQ--NKCHMEALEIFNDMEK 335
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
P+E T ++ A A+LG + +H +++ F +G ALI+ Y C +
Sbjct: 336 ESHLSPDETTLVIILSAIAQLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQ 395
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-------ANSISYNSMIK 323
AM V++ +EN ++ N++I GL G E A FN L + + I++ ++
Sbjct: 396 HAMLVFEGIENKSIDHWNAMIGGLAVHGLGESA---FNMLLQIERLSIIPDDITFVGVLN 452
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
+ G V + FE M + I P ++ + M+ ++ E A
Sbjct: 453 ACSHSGLVKEGLLCFELMRRKHKIE--------PRLQH----YGCMVDILSRSGSIELAK 500
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDM 442
L + ++ I+ + ACS + G+L+ HL+ + + + YV L +M
Sbjct: 501 NL---IEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYV--LLSNM 555
Query: 443 YSRCGSINDAQ 453
Y+ G D +
Sbjct: 556 YASFGMWKDVR 566
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V+ I + G + A+ LFDQMP+R VV++N+M+ GY + E+L + + M +
Sbjct: 276 VVTCATMIDGYAKLGFVHQAKTLFDQMPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEK 335
Query: 78 -SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
S++ +ETT ILS AQL L +H +++ + +G L+ Y+ C I+
Sbjct: 336 ESHLSPDETTLVIILSAIAQLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQ 395
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A VF+ + + W+ M+ G L AF++ +++ + ++
Sbjct: 396 HAMLVFEGIENKSIDHWNAMIGGLAVHGLGESAFNMLLQIERLSII-------------- 441
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
P++ TF V+ AC+ G EG
Sbjct: 442 -------------------PDDITFVGVLNACSHSGLVKEG 463
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 44/300 (14%)
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
EME +P WN++I + +AL L+ M + + + + S++ ACS LG ++ G
Sbjct: 75 EME-DPFLWNAVIKSHSHGKDPRQALLLFCLMLENGVSVDKFSLSLVLKACSRLGFVKGG 133
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+H L KT S++++ L+ +Y +CG + A+ F + + ++ +++NGY
Sbjct: 134 MQIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSMINGYVKC 193
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL-VNEGMKIFRSMKS--------- 527
GL A LF++M + + N ++ ++S + VN K+F M
Sbjct: 194 GLIESARELFDLMPRE--MKNLISWNSMISGYAQTSEGVNIASKLFAEMPEKDLISWNSM 251
Query: 528 ----------------YGVVPTLEHYTC--VVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
+ V+P + TC ++D + G +H+A+ MP+ D V +
Sbjct: 252 IDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQMPLR-DVVAY 310
Query: 570 GALLSA-----CWFWMNMEVGE--RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
++++ C +ME E +K L + +ILS I A LG+ K D+
Sbjct: 311 NSMMAGYVQNKC----HMEALEIFNDMEKESHLSPDETTLVIILSAI-AQLGRLSKATDM 365
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 12/167 (7%)
Query: 420 LHAHLVKTPFESNVYVGTSLV-----------DMYSRCGSINDAQASFSSISSPNVAAWT 468
+H L+KT N + T +V ++RC SFS + W
Sbjct: 24 IHGGLIKTGIIKNSNLTTRIVLAFAASRRPYLAEFARCVFHEYHVCSFSPGEMEDPFLWN 83
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
A++ +SH +A+LLF +MLE + + + VL AC R G V GM+I ++
Sbjct: 84 AVIKSHSHGKDPRQALLLFCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLRKT 143
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G+ L C++ L + G L A + MP + D+V + ++++
Sbjct: 144 GLWSDLFLQNCLIGLYLKCGCLGFARQMFDRMP-QRDSVSYNSMING 189
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 206/660 (31%), Positives = 331/660 (50%), Gaps = 98/660 (14%)
Query: 59 YSKWAKFDESLSLVSTMHRS----NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG 114
Y+ +FD SL+L+ ++H S ++KL + S ILS+ NSL+ K
Sbjct: 14 YASAFEFDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATK---------- 63
Query: 115 YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI 174
L+F YA C ++ VFD L
Sbjct: 64 ----------LIFAYAICQHPYHSRLVFDSLQH--------------------------- 86
Query: 175 KMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAF 234
K+V +W LI+GYAK+ E A +LF M S + +P+++T ++ + + LGA
Sbjct: 87 ----KNVFLWNSLINGYAKNRLYNE-AFQLFNQMCSS-DVLPDDFTLSTLSKVSSELGAL 140
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
GK +HG I+ GF D + +++ YC C F+ + +V+D + + N LI G
Sbjct: 141 FSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGY 200
Query: 295 ISMG----RIEDAELIFN-RLTEANSISY--NSMI------KGYAVYGQ----------- 330
G R E E + ++ E +Y +S++ KG YG+
Sbjct: 201 AVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNEL 260
Query: 331 ---VDDSKRL---FEKMPHRSIISLNTMI---SVIPEME-RNPVTWNSMISGYVQNNLHE 380
+D L M RS N ++ V M+ RN +W +MI+GYV+N +
Sbjct: 261 VLGLDSDVHLGCCLIDMYSRS----NKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSD 316
Query: 381 KALQLYMTMRKL-AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
+AL L+ M+ + I+ R + + ACS L G+ +H V+ + V + +L
Sbjct: 317 EALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNAL 376
Query: 440 VDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
+DMYS+CGS++ A+ F S + +W+++++GY HG G EA+LL++ ML+ I P+
Sbjct: 377 IDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPD 436
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
T VG+LSAC R+GLVNEG+ I+ S + YG+ PTLE + C+VD+LGR+G L A +FI
Sbjct: 437 MITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFI 496
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
K MP+E VWGAL+S ++E+ E A + + L+ + S YV +SN+YA +W
Sbjct: 497 KAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWD 556
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSVV 677
++R+ + ++K PGCSWI +N++ H F V D+ +P+ IY L+ L +N +
Sbjct: 557 AVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSATSIYNMLDDLLLTMNDAI 616
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/526 (23%), Positives = 232/526 (44%), Gaps = 69/526 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
+R +FD + + V WN+++ GY+K ++E+ L + M S+V ++ T ST+ V ++
Sbjct: 77 SRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSE 136
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L +L GK IH ++ G+ V + ++ Y C EE+++VFDE+ N W+++
Sbjct: 137 LGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVL 196
Query: 157 LVGYV---QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ GY CN + ++ F+K + D E
Sbjct: 197 IAGYAVSGNCNFREETWE-FVKQMQMD--------------------------------E 223
Query: 214 NMPNEYTFDSVIRAC-ARLGAFCEGKVVHGLLIK----CGFEFDESIGGALIEFYCGCEA 268
P+ YT S++ C G + G+ +H ++K G + D +G LI+ Y
Sbjct: 224 VRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNK 283
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-----EANSISYNSM-- 321
RV+DR++ + + ++ING + G ++A +F + E N +S S+
Sbjct: 284 VVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLP 343
Query: 322 -------------IKGYAVYGQVDDSKRLFEKM--PHRSIISLNTMISVIPE--MERNPV 364
I G+AV ++++ L + + SL++ V + + ++ +
Sbjct: 344 ACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAI 403
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+W+SMISGY + ++A+ LY M + I T + ACS G + +G +++ +
Sbjct: 404 SWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSV 463
Query: 425 VKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG--LG 480
+ E + + +VDM R G ++ A ++ P + W AL++ HG
Sbjct: 464 INDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEM 523
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
E F I LE + N + + ++ R V E ++ + +
Sbjct: 524 QELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKR 569
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 148/335 (44%), Gaps = 46/335 (13%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-SNVKLNETTFS 88
R+ ++V R +FD+M R V SW M+ GY + DE+LSL M ++ N +
Sbjct: 280 RSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLV 339
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++L C+ + L+ G+QIH ++ + + L+ Y+ C ++ A+RVF ED
Sbjct: 340 SVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVF----ED 395
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ L KD + W+ +ISGY G ++A+ L+ M
Sbjct: 396 DSLC--------------------------KDAISWSSMISGYGLHGKG-QEAILLYDKM 428
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK-CGFEFDESIGGALIEFYCGCE 267
++G P+ T ++ AC+R G EG ++ +I G E I +++
Sbjct: 429 LQAGIR-PDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAG 487
Query: 268 AFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRLTE------ANSISYNS 320
D A+ + P + +L++ I G +E EL + L + +N +S ++
Sbjct: 488 QLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISN 547
Query: 321 MIKGYAVYGQVDDSKRLFE-----KMPHRSIISLN 350
+ + V + +R+ + K+P S IS+N
Sbjct: 548 LYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISIN 582
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 22 NKAITECGRNGQLVTARNLF-DQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N I + G L +AR +F D + +SW++M+ GY K E++ L M ++ +
Sbjct: 374 NALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGI 433
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVL 111
+ + T ILS C++ + +G I+ V+
Sbjct: 434 RPDMITTVGILSACSRSGLVNEGLNIYSSVI 464
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 191/634 (30%), Positives = 311/634 (49%), Gaps = 87/634 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-- 79
+K I+ ++G + A N+F ++P + + SWN + Y+ + L L S++ SN
Sbjct: 42 SKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTLHNMHTDLLKLFSSLVNSNST 101
Query: 80 -VKLNETTFSTILSVCAQL--NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
VK + T + L A L NS + K++H +L+ G E FV + L+ FY+ C E+
Sbjct: 102 DVKPDRFTVTCSLKALASLFSNSGL-AKEVHSFILRRGLEYDIFVVNALITFYSRCDELV 160
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+ +FD + E + + W+ ML GY Q S +
Sbjct: 161 LARIMFDRMPERDTVSWNAMLAGYSQ-----------------------------GGSYE 191
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
C+ +LFR M S E PN T SV++ACA+ G VH + + + D S+
Sbjct: 192 ECK---ELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLW 248
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
A+I Y C G ++ A +F + E + I
Sbjct: 249 NAVIGLYAKC-------------------------------GILDYARELFEEMPEKDGI 277
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
+Y SMI GY V+G V+ + LF + E R P TWN++ISG VQN
Sbjct: 278 TYCSMISGYMVHGFVNQAMDLFREQ----------------ERPRLP-TWNAVISGLVQN 320
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
N E A+ ++ M+ T + + S +L+ G+ +H + ++ ++ N+YV
Sbjct: 321 NRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVA 380
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
T+++D Y++CG ++ AQ F I ++ AWT++++ Y+ HG + A+ LF ML I
Sbjct: 381 TAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQ 440
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P+ TF VL+AC +G ++E KIF + YG+ P +EHY C+V +L R+G L +A E
Sbjct: 441 PDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVE 500
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
FI MP+E A VWGALL+ ++E+G+ ++F ++ + YVI++N+Y+ G+
Sbjct: 501 FISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQSGR 560
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
W IR + + +KK PG SWIE + + F
Sbjct: 561 WKDADTIRDLMKEVRLKKIPGNSWIETSGGMQRF 594
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 210/443 (47%), Gaps = 29/443 (6%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I N IT R +LV AR +FD+MP R VSWN ML GYS+ ++E L M
Sbjct: 143 IFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGGSYEECKELFRVMLS 202
Query: 78 S-NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
S VK N T ++L CAQ N L G ++H V +S + + + ++ YA C ++
Sbjct: 203 SVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGILD 262
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+ +F+E+ E + + + M+ GY+ ++ A D+F + + + W +ISG ++ +
Sbjct: 263 YARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQN-N 321
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
E A+ +FR M+ G PN T S++ + GK +HG I+ ++ + +
Sbjct: 322 RQEGAVDIFRAMQSHG-CRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVA 380
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLT---E 312
A+I+ Y C GA V+D+++ L A S+I+ G A L + LT +
Sbjct: 381 TAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQ 440
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT--WNSMI 370
+ +++ S++ A G++D++ ++F + +PE P+ + M+
Sbjct: 441 PDQVTFTSVLAACAHSGELDEAWKIFNVL--------------LPEYGIQPLVEHYACMV 486
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PF 429
+ A++ + K+ ++ T + L + S G ++ G+ + L + P
Sbjct: 487 GVLSRAGKLSDAVEF---ISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPE 543
Query: 430 ESNVYVGTSLVDMYSRCGSINDA 452
+ YV + ++YS+ G DA
Sbjct: 544 NTGNYV--IMANLYSQSGRWKDA 564
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 134/284 (47%), Gaps = 24/284 (8%)
Query: 297 MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+G+ A L+ + + N + + +I Y+ G + D+ +F K+P ++I S
Sbjct: 21 VGKQLHARLVLSSVVPDNFLG-SKLISFYSKSGSIRDAYNVFGKIPRKNIFS-------- 71
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTM---RKLAIDRTRSTFSVLFHACSCLGS 413
WN++ Y +N+H L+L+ ++ + R T + A + L S
Sbjct: 72 ---------WNALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFS 122
Query: 414 LQQ-GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+ +H+ +++ E +++V +L+ YSRC + A+ F + + +W A++
Sbjct: 123 NSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLA 182
Query: 473 GYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
GYS G E LF +ML ++ PNA T V VL AC ++ + G+++ R + +
Sbjct: 183 GYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIK 242
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + V+ L + G L A E ++MP E D + + +++S
Sbjct: 243 MDVSLWNAVIGLYAKCGILDYARELFEEMP-EKDGITYCSMISG 285
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
S + L C+ + G+ LHA LV + + ++G+ L+ YS+ GSI DA F
Sbjct: 4 SAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGK 63
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ---DIVPNAATFVGVLSACVRAGLV 515
I N+ +W AL Y+ H + ++ + LF ++ D+ P+ T L A + +
Sbjct: 64 IPRKNIFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKA-LASLFS 122
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLL----GRSGHLHEAEEFIKDMPIELDAVVWGA 571
N G+ + + S+ + LE+ VV+ L R L A MP E D V W A
Sbjct: 123 NSGLA--KEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMP-ERDTVSWNA 179
Query: 572 LLSA 575
+L+
Sbjct: 180 MLAG 183
>gi|345505222|gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
Length = 597
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 281/529 (53%), Gaps = 62/529 (11%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+D +W +I ++ D ++L LF M E+G ++ ++++ V++AC+RLG G
Sbjct: 68 EDPFLWNAVIKSHSHGTDP-RRSLFLFCLMLENGVSV-DKFSLSLVLKACSRLGFVKAGM 125
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+HG L K G D + LI Y C + +V+DR+ + NS+I+G + G
Sbjct: 126 XIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGYSRQVFDRMPQRDSVSYNSMIDGYVKCG 185
Query: 299 RIEDAELIFN----------------------------------RLTEANSISYNSMIKG 324
IE A +F+ + E + IS+NSMI G
Sbjct: 186 LIESARELFDLMPKEMKNLISWNCLISGYAQTSDGVNIASKLFSEMPEKDLISWNSMIDG 245
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNSMI 370
Y +G+++D+K LF+ MP R +I+ TMI ++ R+ V +NSM+
Sbjct: 246 YVKHGRIEDAKDLFDVMPRRDVITWATMIDGYAKLGFIHQAKTLFDQIPHRDVVAYNSMM 305
Query: 371 SGYVQNNLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+GYVQN H +AL+L++ M K L+ D T T ++ A + LG L + +H ++VK
Sbjct: 306 AGYVQNKYHMEALELFIKMEKESHLSPDET--TLVIVLSAIAQLGRLSKAMDMHFYIVKK 363
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F +G +L+DMYS+CGSI A F + + N+ W A++ G + HGLG A F
Sbjct: 364 QFFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENKNIDHWNAIIGGLAIHGLGGPA---F 420
Query: 488 EIMLEQD---IVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDL 543
+++L+ + I P+ TF+GVL+AC +GLV EG+ F M + + + P L+HY C+VD+
Sbjct: 421 DMLLQIERLSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDI 480
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
L RSG + A+ I+ MPIE + V+W L+AC E+GE A+ + S+Y
Sbjct: 481 LSRSGSIELAKILIEKMPIEPNDVIWRTFLTACSHHKEFEMGELVAKHLILQAGYNPSSY 540
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
V+LSN+YA G W +R + +++K PGCSWIEL+ RVH F V+
Sbjct: 541 VLLSNMYASCGMWKDVRRVRTMMKERKIQKIPGCSWIELDGRVHEFFVD 589
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 196/427 (45%), Gaps = 28/427 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L +R +FD+MP R VS+N+M+ GY K + + L M + L +++ ++
Sbjct: 154 GCLGYSRQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPKEMKNL--ISWNCLI 211
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S AQ + DG I + E + ++ Y IE+AK +FD + + +
Sbjct: 212 SGYAQTS---DGVNIASKLFSEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDVMPRRDVI 268
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY + + A +F ++P +DVV + +++GY ++ E AL+LF M +
Sbjct: 269 TWATMIDGYAKLGFIHQAKTLFDQIPHRDVVAYNSMMAGYVQNKYHME-ALELFIKMEKE 327
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T V+ A A+LG + +H ++K F +G ALI+ Y C +
Sbjct: 328 SHLSPDETTLVIVLSAIAQLGRLSKAMDMHFYIVKKQFFIGGKLGVALIDMYSKCGSIQH 387
Query: 272 AMRVYDRLENPCLNASNSLINGLISM---GRIEDAELIFNRLT-EANSISYNSMIKGYAV 327
AM V+ LEN ++ N++I GL G D L RL+ + + I++ ++ +
Sbjct: 388 AMLVFKGLENKNIDHWNAIIGGLAIHGLGGPAFDMLLQIERLSIKPDDITFIGVLNACSH 447
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V + FE M + I P ++ + M+ ++ E A L
Sbjct: 448 SGLVKEGLLCFELMRRKHKIE--------PRLQH----YGCMVDILSRSGSIELAKIL-- 493
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRC 446
+ K+ I+ + ACS + G+L+ HL+ + + + YV L +MY+ C
Sbjct: 494 -IEKMPIEPNDVIWRTFLTACSHHKEFEMGELVAKHLILQAGYNPSSYV--LLSNMYASC 550
Query: 447 GSINDAQ 453
G D +
Sbjct: 551 GMWKDVR 557
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 37/262 (14%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW-----AK--FD- 66
E ++S N I ++G++ A++LFD MP R V++W TM+ GY+K AK FD
Sbjct: 233 EKDLISWNSMIDGYVKHGRIEDAKDLFDVMPRRDVITWATMIDGYAKLGFIHQAKTLFDQ 292
Query: 67 -----------------------ESLSLVSTMHR-SNVKLNETTFSTILSVCAQLNSLID 102
E+L L M + S++ +ETT +LS AQL L
Sbjct: 293 IPHRDVVAYNSMMAGYVQNKYHMEALELFIKMEKESHLSPDETTLVIVLSAIAQLGRLSK 352
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
+H ++K + +G L+ Y+ C I+ A VF L N W+ ++ G
Sbjct: 353 AMDMHFYIVKKQFFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENKNIDHWNAIIGGLAI 412
Query: 163 CNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
L AFD+ +++ K D + + +++ + S ++ L F MR + P
Sbjct: 413 HGLGGPAFDMLLQIERLSIKPDDITFIGVLNACSHS-GLVKEGLLCFELMRRKHKIEPRL 471
Query: 219 YTFDSVIRACARLGAFCEGKVV 240
+ ++ +R G+ K++
Sbjct: 472 QHYGCMVDILSRSGSIELAKIL 493
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 178/552 (32%), Positives = 292/552 (52%), Gaps = 58/552 (10%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A VF + + ++++W + G+A S D ALKL+ M G +PN YTF ++++C
Sbjct: 44 AISVFETIQEPNLLIWNTMFRGHALSSDPV-SALKLYVCMISLGL-LPNSYTFPFLLKSC 101
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A+ AF EG+ +HG ++K G + D + +LI Y + A +V+D + + +
Sbjct: 102 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYT 161
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI-I 347
+LI G S G IE+A+ +F+ + + +S+N+MI GYA G ++ LF+ M ++
Sbjct: 162 ALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 221
Query: 348 SLNTMISVIP-----------------------------------------EME------ 360
+TM++V+ E+E
Sbjct: 222 DESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 281
Query: 361 -----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ ++WN++I GY NL+++AL L+ M + T + AC+ LG++
Sbjct: 282 EGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 341
Query: 416 QGQLLHAHLVK--TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
G+ +H ++ K + + TSL+DMY++CG I A F+SI ++++W A++ G
Sbjct: 342 IGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 401
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVP 532
++ HG + +F M + I P+ TFVG+LSAC +G+++ G IFRSM + Y + P
Sbjct: 402 FAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTP 461
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
LEHY C++DLLG SG EAEE I M +E D V+W +LL AC N+E+GE AQ +
Sbjct: 462 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNL 521
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
++ + +YV+LSNIYA G+W + + R L +KK PGCS IE++S VH F +
Sbjct: 522 IKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 581
Query: 653 DRNNPNCNVIYA 664
D+ +P IY
Sbjct: 582 DKFHPRNREIYG 593
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 223/474 (47%), Gaps = 34/474 (7%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A ++F+ + ++ WNTM G++ + +L L M + N TF +L
Sbjct: 41 LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKS 100
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
CA+ + +G+QIH VLK G + +V + L+ Y +E+A +VFDE + + +
Sbjct: 101 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSY 160
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++ GY + +A +F ++P KDVV W +ISGYA++ + ++AL+LF+ M ++
Sbjct: 161 TALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGN-YKEALELFKDMMKTNV 219
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+E T +V+ ACA+ G+ G+ VH + GF + I ALI+ Y C + A
Sbjct: 220 R-PDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETAC 278
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYG 329
+++ L + + N+LI G M ++A L+F + + N ++ S++ A G
Sbjct: 279 GLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 338
Query: 330 QVDDSKRLFEKMPHR------------SIISLNTMISVIPE--------MERNPVTWNSM 369
+D + + + R S+I + I + ++ +WN+M
Sbjct: 339 AIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAM 398
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK--- 426
I G+ + + + ++ MRK I+ TF L ACS G L G+ + + +
Sbjct: 399 IFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYK 458
Query: 427 -TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
TP + ++D+ G +A+ +++ P+ W +L+ HG
Sbjct: 459 MTPKLEHY---GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 509
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 207/441 (46%), Gaps = 57/441 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS I G + A+ +FD++P++ VVSWN M+ GY++ + E+L L M +
Sbjct: 157 VVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 216
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+NV+ +E+T T++S CAQ S+ G+Q+H + G+ + + L+ Y+ C E+E
Sbjct: 217 TNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELET 276
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F+ L + + W+ ++ GY NL
Sbjct: 277 ACGLFEGLPYKDVISWNTLIGGYTHMNLY------------------------------- 305
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK--CGFEFDESI 255
++AL LF+ M SGE PN+ T S++ ACA LGA G+ +H + K G S+
Sbjct: 306 -KEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSL 363
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----T 311
+LI+ Y C + A +V++ + + L++ N++I G GR + + IF+R+
Sbjct: 364 RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGI 423
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
E + I++ ++ + G +D + +F M + P++E + MI
Sbjct: 424 EPDDITFVGLLSACSHSGMLDLGRHIFRSMTQD--------YKMTPKLEH----YGCMID 471
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFE 430
+ L ++A ++ TM ++ + L AC G+++ G+ +L+K P
Sbjct: 472 LLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPEN 528
Query: 431 SNVYVGTSLVDMYSRCGSIND 451
YV L ++Y+ G N+
Sbjct: 529 PGSYV--LLSNIYATAGRWNE 547
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 176/377 (46%), Gaps = 60/377 (15%)
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG---AMRVYDRLENPCLNASNSLING- 293
+++H +IK G LIEF FDG A+ V++ ++ P L N++ G
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 66
Query: 294 ---------------LISMGRIEDAELIFNRLTEANSIS--------------------- 317
+IS+G + ++ F L ++ + S
Sbjct: 67 ALSSDPVSALKLYVCMISLGLLPNS-YTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLD 125
Query: 318 ---YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEME- 360
+ S+I Y G+++D+ ++F++ PHR ++S +I + E+
Sbjct: 126 LYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPV 185
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
++ V+WN+MISGY + +++AL+L+ M K + ST + AC+ GS++ G+ +
Sbjct: 186 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 245
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H+ + F SN+ + +L+D+YS+CG + A F + +V +W L+ GY+H L
Sbjct: 246 HSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLY 305
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG--MKIFRSMKSYGVVPTLEHYT 538
EA+LLF+ ML PN T + +L AC G ++ G + ++ + GV T
Sbjct: 306 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRT 365
Query: 539 CVVDLLGRSGHLHEAEE 555
++D+ + G + A +
Sbjct: 366 SLIDMYAKCGDIEAAHQ 382
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 122/271 (45%), Gaps = 24/271 (8%)
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVD---MYSRCGSINDAQASFSSISSPNVAAWTAL 470
LQ +++HA ++KT + Y + L++ + + A + F +I PN+ W +
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
G++ A+ L+ M+ ++PN+ TF +L +C ++ EG +I + G
Sbjct: 63 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGC 122
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
L +T ++ + ++G L +A + + P D V + AL+ +E AQ
Sbjct: 123 DLDLYVHTSLISMYVQNGRLEDAHKVFDESP-HRDVVSYTALIKGYASRGYIE----NAQ 177
Query: 591 KMFGLDKKPISAYVILSNI---YAVLGKWGKKMDIRKRLTHLEVKKD--------PGCSW 639
KMF D+ P+ V + + YA G + + +++ K + V+ D C+
Sbjct: 178 KMF--DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 235
Query: 640 ---IELNSRVHAFSVEDRNNPNCNVIYATLE 667
IEL +VH++ + N ++ A ++
Sbjct: 236 SGSIELGRQVHSWIDDHGFGSNLKIVNALID 266
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/526 (33%), Positives = 279/526 (53%), Gaps = 56/526 (10%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+D +W +I ++ D +AL LF M E+G ++ ++++ V++AC+RLG EG
Sbjct: 88 EDXYLWNAVIKSHSHGTDP-RRALLLFCLMLENGVSV-DKFSLSLVLKACSRLGLVKEGM 145
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+HG L K G D + LI Y C A +++DR+ + NS+I+G + G
Sbjct: 146 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCG 205
Query: 299 RIEDAELIFNRLTE----------------------------------ANSISYNSMIKG 324
E A +F+ + E + IS+NSMI G
Sbjct: 206 STESARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDLISWNSMIDG 265
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNSMI 370
Y +G+++D+K LF+ MP R +++ +TMI ++ R+ V++NSMI
Sbjct: 266 YVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMI 325
Query: 371 SGYVQNNLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+GYVQN + +AL+++ M K L+ D T T ++ A + LG L + +H ++V+
Sbjct: 326 AGYVQNRYNMEALEIFSDMEKESHLSPDET--TLVIVLSAIAQLGRLSKAMDMHLYIVEK 383
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F +G +L+DMYS+CGSI A F I + ++ W A++ G + HGLG A +
Sbjct: 384 QFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAIHGLGESAFDML 443
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
+ + I P+ TFVG+L+AC +GLV EG+ F M + + + P L+HY C+VD+L R
Sbjct: 444 LQIERRSIKPDDITFVGLLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSR 503
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
SG + A+ I++MPIE + V+W L+AC E GE A+ + S+YV+L
Sbjct: 504 SGSIELAKNLIEEMPIEPNDVIWRTFLAACNHHKEFETGELVAKHLIWEAGYNPSSYVLL 563
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
SN+YA GKW IR + +++K PGCSWIEL+ RVH F V+
Sbjct: 564 SNLYASFGKWKDVRRIRTIMKERKIEKVPGCSWIELDGRVHEFFVD 609
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 194/427 (45%), Gaps = 28/427 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+MP R VS+N+M+ GY K + + L M L ++++++
Sbjct: 174 GWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARELFDLMPEEMKNL--ISWNSMI 231
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S AQ + DG I + + + ++ Y IE+AK +FD + + +
Sbjct: 232 SGYAQTS---DGVDIASKLFSEMPDKDLISWNSMIDGYVKHGRIEDAKYLFDVMPRRDVV 288
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS M+ GY + + A +F +MP +DVV + +I+GY ++ E AL++F M +
Sbjct: 289 TWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNME-ALEIFSDMEKE 347
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T V+ A A+LG + +H +++ F +G ALI+ Y C +
Sbjct: 348 SHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQH 407
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSISYNSMIKGYAV 327
AM V+ +EN ++ N++I GL G E A I R + + I++ ++ +
Sbjct: 408 AMLVFKGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGLLNACSH 467
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V + FE M + I P ++ + M+ ++ E A L
Sbjct: 468 SGLVKEGLLCFELMRRKHKIE--------PRLQH----YGCMVDILSRSGSIELAKNL-- 513
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRC 446
+ ++ I+ + AC+ + G+L+ HL+ + + + YV L ++Y+
Sbjct: 514 -IEEMPIEPNDVIWRTFLAACNHHKEFETGELVAKHLIWEAGYNPSSYV--LLSNLYASF 570
Query: 447 GSINDAQ 453
G D +
Sbjct: 571 GKWKDVR 577
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 6/221 (2%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V+ + I + G + A+ LFDQMP R VVS+N+M+ GY + E+L + S M +
Sbjct: 287 VVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEK 346
Query: 78 -SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
S++ +ETT +LS AQL L +H +++ + +G L+ Y+ C I+
Sbjct: 347 ESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQ 406
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYA 192
A VF + + W+ M+ G L AFD+ +++ ++ D + + L++ +
Sbjct: 407 HAMLVFKGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGLLNACS 466
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
S ++ L F MR + P + ++ +R G+
Sbjct: 467 HS-GLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGS 506
>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/548 (32%), Positives = 299/548 (54%), Gaps = 37/548 (6%)
Query: 160 YVQCNLMSDAFDVFIKMPK--KDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMP 216
Y +CN M+ A V + ++V + LISG+ ++G + L + MR++G +P
Sbjct: 2 YAKCNQMNQALLVLNRTADYARNVFAYNALISGFV--LNGLPQDGLGAYEEMRQAGV-LP 58
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
++YTF +I+ + + K +HGL+ K G + D +G +L+ Y E A ++
Sbjct: 59 DKYTFPCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELF 118
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG----YAVYGQVD 332
D + + + NS++NG +GR ++A + +++ + + G +A G D
Sbjct: 119 DEIPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFD 178
Query: 333 DSKRLFE---KMPHRSIISL-NTMISVIPEM--------------ERNPVTWNSMISGYV 374
+ + + KM S +S+ N +I + + E++ +WNS++S
Sbjct: 179 NGRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANE 238
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF----E 430
+ H+ L+L+ M + T + + ACS L +L G+ +H +++ F E
Sbjct: 239 LCSDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGE 298
Query: 431 S----NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
S N+ +L+DMY++CGS+ DA F ++S+ + A+W ++ GY HG G+EA+ +
Sbjct: 299 SENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYM 358
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLG 545
F M + + PN TFVGVL AC AG +++G+K M+ +GVVPT++HYTCV+D+LG
Sbjct: 359 FSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLG 418
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G L EA + MPI+ + VVW ALL+AC + N+++ E AAQK+F L+ YV+
Sbjct: 419 RAGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVFELNPAHCGNYVL 478
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
+SN Y G++ + +DIR + +VKK PGCSWIEL + ++ F DRN+P +IY
Sbjct: 479 MSNAYVAAGRYQEVLDIRHTMRQQDVKKTPGCSWIELKNGMNTFINGDRNHPEARLIYPE 538
Query: 666 LEHLTANL 673
L L A++
Sbjct: 539 LHLLAAHI 546
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 194/463 (41%), Gaps = 76/463 (16%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR LFD++P R VV WN+M+ GY++ +FDE+L + M + V +++ T S +LSV A
Sbjct: 114 ARELFDEIPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAG 173
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+G+ +H ++K G++ V + L+ Y C + +A +F+ ++E
Sbjct: 174 RGDFDNGRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNE--------- 224
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
KD+ W ++S D + L+LF M G +
Sbjct: 225 ----------------------KDIFSWNSILSANELCSDH-DGTLRLFDRMLGDGVQL- 260
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ T +++ AC+ L A G+ +HG +I GF D + +Y
Sbjct: 261 DLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGE-----------------SENMY 303
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
+ L N+L++ G + DA ++F ++ ++ S+N MI GY ++G +++
Sbjct: 304 N------LQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALY 357
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR-KLAID 395
+F M ++ N +T+ ++ + ++ M K +
Sbjct: 358 MFSDMCKSG-------------LKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVV 404
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
T ++ + G L++ L V P ++N V +L+ G+++ A+ +
Sbjct: 405 PTIQHYTCVIDMLGRAGQLEEAYKL---AVTMPIQTNPVVWRALLAACQLYGNVDLAEVA 461
Query: 456 FSSISSPNVAA---WTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
+ N A + + N Y G E + + M +QD+
Sbjct: 462 AQKVFELNPAHCGNYVLMSNAYVAAGRYQEVLDIRHTMRQQDV 504
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 162/390 (41%), Gaps = 76/390 (19%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M ++ + N I G+ +V A +F+ M + + SWN++L + D +L L
Sbjct: 190 MGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELCSDHDGTLRL 249
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M V+L+ T +TIL C+ L +L+ G++IH ++ +G FV G
Sbjct: 250 FDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNG-----FVKDG------- 297
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
E++ +++ L N L+ Y +C M DA VF M +D W +I GY
Sbjct: 298 -----ESENMYN-LQTINALMDM-----YAKCGSMRDAGMVFYNMSNRDTASWNIMIMGY 346
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
G E AL +F M +SG PNE TF V+ AC+ G +G
Sbjct: 347 GMHGYGNE-ALYMFSDMCKSGLK-PNEITFVGVLLACSHAGFISQG-------------- 390
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRL 310
I+F E G + P + +I+ L G++E+A +L
Sbjct: 391 --------IKFLGEMELKHGVV--------PTIQHYTCVIDMLGRAGQLEEAYKLAVTMP 434
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV---TWN 367
+ N + + +++ +YG VD ++ +K+ E NP +
Sbjct: 435 IQTNPVVWRALLAACQLYGNVDLAEVAAQKV-----------------FELNPAHCGNYV 477
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
M + YV +++ L + TMR+ + +T
Sbjct: 478 LMSNAYVAAGRYQEVLDIRHTMRQQDVKKT 507
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 191/611 (31%), Positives = 314/611 (51%), Gaps = 64/611 (10%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T S++L C++ +L G +H VLK+G + F+ + +L YA C A++VFDE
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDE- 63
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
M +K++V W+ +ISGY ++ + + A+ L+
Sbjct: 64 ------------------------------MFEKNLVSWSAMISGYDQAGEP-QMAIDLY 92
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M +PNEY F SVI ACA L A G+ +H +K G+E + +LI Y
Sbjct: 93 SQMFL----VPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMK 148
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI--------- 316
C A+ V+ P + N+LI G + ++E F + + I
Sbjct: 149 CNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGV 208
Query: 317 -----SYNSMIKGYAVYGQVDDSKRLFEKMPH--RSIISLNTMISVIPEMER-------- 361
+ ++ +G ++ Q K + P II++ + +++I E E+
Sbjct: 209 LGICTTTENLKRGAELHCQT--VKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEK 266
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLL 420
+ ++WN++I+ + H K L+++ M + R TF+ AC+ L S+ G+ +
Sbjct: 267 DVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQI 326
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HAHL++T ++ VG +LV+MY++CG I A FS + N+ +W ++ G+ +HGLG
Sbjct: 327 HAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLG 386
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTC 539
AV LFE M I P++ TF+G+L+AC AGLV++G F SM ++YG+ P +EH++C
Sbjct: 387 ERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSC 446
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
++D+LGR+G L+EAEE+++ P D VV +LLSA ++ +GER A+ + L
Sbjct: 447 LIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVT 506
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNC 659
S YV+LSN+YA G W + RKRL +KK+PG S IE+N V F++ D +
Sbjct: 507 TSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRI 566
Query: 660 NVIYATLEHLT 670
I L+ L+
Sbjct: 567 KEIKGILKTLS 577
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 201/491 (40%), Gaps = 104/491 (21%)
Query: 5 ATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK 64
TQS M+ N + + G AR +FD+M + +VSW+ M+ GY + +
Sbjct: 33 GTQSDVFMS--------NHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGE 84
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
++ L S M + NE F++++S CA L+++ G++IH LK GYE FV +
Sbjct: 85 PQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNS 141
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
L+ Y C + +A VF E N + ++ ++ G+V+ +
Sbjct: 142 LISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQL------------------ 183
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
E+ L+ F+ MR+ G +P+ + F V+ C G +H
Sbjct: 184 --------------ERGLEFFKLMRQQGL-IPDRFAFMGVLGICTTTENLKRGAELHCQT 228
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI------------- 291
+K + IG +I Y A + + +E + + N+LI
Sbjct: 229 VKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGL 288
Query: 292 --------------------------NGLISM--GRIEDAELIFNRLTEANSISYNSMIK 323
GL SM G+ A L+ RL + + N+++
Sbjct: 289 RVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVG-NALVN 347
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
YA G + + +F KM H +++S WN++I+G+ + L E+A+
Sbjct: 348 MYAKCGCIGYAYDIFSKMVHHNLVS-----------------WNTIIAGFGNHGLGERAV 390
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDM 442
+L+ M I TF L AC+ G + +GQL + +T ++ + L+DM
Sbjct: 391 ELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDM 450
Query: 443 YSRCGSINDAQ 453
R G +N+A+
Sbjct: 451 LGRAGRLNEAE 461
>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/505 (32%), Positives = 279/505 (55%), Gaps = 36/505 (7%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y +C M +A VF +P +V W LI+G+ + C KA+++ M+E+G PNE
Sbjct: 2 YTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQE-GSCAKAVEVLSLMQEAGFE-PNEV 59
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T+ +++ +C + + + + + + L+ YC E + ++ R+
Sbjct: 60 TYSNLLASCIKARDVHSARAMFDKISRPSV----TTWNTLLSGYCQEEQHQDTIELFRRM 115
Query: 280 ENPCLNASNSLIN---------GLISMGR-IEDAELIFNRLTEANSISYNSMIKGYAVYG 329
++ + + + G++ GR + A + F L + + ++ Y+ G
Sbjct: 116 QHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRF--LLHNDMFVASGLVDMYSKCG 173
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
Q+ ++ +F KM ER+ V WNS+ISG ++L+++A + M
Sbjct: 174 QIGIARSIFNKMT-----------------ERDVVCWNSIISGLTIHSLNKEAFDFFKQM 216
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
R+ I T S+++ + ++CS L S+ G+ +HA ++K ++ NVYVG++L+DMY++CG++
Sbjct: 217 RENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNM 276
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+DA+ F ++ N+ AW +++GY+ +GLG +AV LFE ML + P+A TF+ VL+ C
Sbjct: 277 DDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGC 336
Query: 510 VRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
+GLV++ M F SM+ SYG++P EHYTC++D LGR+G E E I MP + D ++
Sbjct: 337 SHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPII 396
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W LL+AC N E+G+ AA+ +F +D K S YV+LSNIYA LG+ G +R +++
Sbjct: 397 WEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSN 456
Query: 629 LEVKKDPGCSWIELNSRVHAFSVED 653
V K G SWI+ V AF V D
Sbjct: 457 RGVVKGRGYSWIDQKDGVRAFMVAD 481
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 173/371 (46%), Gaps = 77/371 (20%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V+ + + C + + +AR +FD++ +V +WNT+L GY + + +++ L M
Sbjct: 59 VTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQ 118
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
NV+ + TT + ILS C++L L G+Q+H ++ FV SGL+ Y+ C +I A
Sbjct: 119 NVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIA 178
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +F+++ E + + W+ ++ G +L +AFD
Sbjct: 179 RSIFNKMTERDVVCWNSIISGLTIHSLNKEAFD--------------------------- 211
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
F+ MRE+G MP E ++ S+I +C+RL + G+ +H ++K G++ + +G A
Sbjct: 212 -----FFKQMRENG-IMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSA 265
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
LI+ Y C G ++DA L F+ + N +++
Sbjct: 266 LIDMYAKC-------------------------------GNMDDARLFFDTMMMKNIVAW 294
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N MI GYA G D + LFE M + E + + VT+ ++++G + L
Sbjct: 295 NEMIHGYAQNGLGDKAVELFEYM-------------LTTEQKPDAVTFIAVLTGCSHSGL 341
Query: 379 HEKALQLYMTM 389
+KA+ + +M
Sbjct: 342 VDKAMAFFNSM 352
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
GQ+ AR++F++M R VV WN+++ G + + E+ M + + E+++++++
Sbjct: 173 GQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMI 232
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ C++L+S+ G+QIH V+K GY+ +VGS L+ YA C +++A+ FD + N +
Sbjct: 233 NSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIV 292
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
W+ M+ GY Q L A ++F M K D V + +++G + S +KA+ F
Sbjct: 293 AWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHS-GLVDKAMAFFNS 351
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCE 236
M S +P + +I A R G F E
Sbjct: 352 MENSYGIIPLAEHYTCLIDALGRAGRFVE 380
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/466 (20%), Positives = 170/466 (36%), Gaps = 133/466 (28%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
++ A +F+ +P T+VSWN ++ G+ + +++ ++S M + + NE T+S +L+
Sbjct: 7 EMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLA 66
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
C I + +H A+ +FD++ +
Sbjct: 67 SC------IKARDVH-----------------------------SARAMFDKISRPSVTT 91
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
W+ +L GY Q D ++F +M ++V
Sbjct: 92 WNTLLSGYCQEEQHQDTIELFRRMQHQNV------------------------------- 120
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
P+ T ++ +C++LG G+ VH ++ D + L++ Y C A
Sbjct: 121 --QPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIA 178
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI-----SYNSMIKG--- 324
+++++ + NS+I+GL ++A F ++ E N I SY SMI
Sbjct: 179 RSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRE-NGIMPTESSYASMINSCSR 237
Query: 325 --------------------------------YAVYGQVDDSKRLFEKMPHRSIISLNTM 352
YA G +DD++ F+ M
Sbjct: 238 LSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTM----------- 286
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
M +N V WN MI GY QN L +KA++L+ M TF + CS G
Sbjct: 287 ------MMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSG 340
Query: 413 SLQQGQLLHAHLVKT----PFESNVYVGTSLVDMYSRCGSINDAQA 454
+ + + + P + T L+D R G + +A
Sbjct: 341 LVDKAMAFFNSMENSYGIIPLAEHY---TCLIDALGRAGRFVEVEA 383
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY++C +++A F S+ S + +W L+ G+ G ++AV + +M E PN T
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+ +L++C++A V+ +F + P++ + ++ + + E + M
Sbjct: 61 YSNLLASCIKARDVHSARAMFDKISR----PSVTTWNTLLSGYCQEEQHQDTIELFRRMQ 116
Query: 562 ---IELDAVVWGALLSACWFWMNMEVGER--AAQKMFGLDKKPISAYVILSNIYAVLGKW 616
++ D +LS+C ++ G + +A F L A ++ ++Y+ G+
Sbjct: 117 HQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLV-DMYSKCGQI 175
Query: 617 GKKMDIRKRLTHLEV 631
G I ++T +V
Sbjct: 176 GIARSIFNKMTERDV 190
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/645 (28%), Positives = 312/645 (48%), Gaps = 57/645 (8%)
Query: 53 NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
N L +K K + + M + + +N ++ + +C L +L DGK H L+
Sbjct: 49 NLHLISLAKQGKLRQVHEFIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNR-LQ 107
Query: 113 SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
+F+ + +L Y +C A+R FD
Sbjct: 108 RMANSNKFIDNCILQMYCDCKSFTAAERFFD----------------------------- 138
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
K+ +D+ W +IS Y + ++A+ LF M + G +PN F ++I + A
Sbjct: 139 --KIVDRDLSSWATIISAYTEE-GRIDEAVGLFLRMLDLG-IIPNFSIFSTLIMSFADPS 194
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
GK +H LI+ F D SI + Y C DGA +++ A L+
Sbjct: 195 MLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMV 254
Query: 293 GLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFE---KMPHRS 345
G R DA L+F+++ E + ++ ++K A G + K++ K+ S
Sbjct: 255 GYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLES 314
Query: 346 IISLNTMI---------------SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+S+ T + + E N +W+++I+GY Q+ ++AL+++ T+R
Sbjct: 315 EVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIR 374
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+ ++ +F ACS + L G +HA +K + + ++++ MYS+CG ++
Sbjct: 375 SKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVD 434
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A +F +I P+ AWTA++ +++HG SEA+ LF+ M + PN TF+G+L+AC
Sbjct: 435 YAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACS 494
Query: 511 RAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
+GLV EG + SM YGV PT++HY C++D+ R+G L EA E I+ MP E D + W
Sbjct: 495 HSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSW 554
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
+LL CW N+E+G AA +F LD + YVI+ N+YA+ GKW + RK +
Sbjct: 555 KSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAER 614
Query: 630 EVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
++K+ CSWI + +VH F V DR++P IY+ L+ L +
Sbjct: 615 NLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFK 659
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 202/464 (43%), Gaps = 57/464 (12%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
A FD++ R + SW T++ Y++ + DE++ L M + N + FST++
Sbjct: 130 FTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMS 189
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
A + L GKQIH +++ IE A + E
Sbjct: 190 FADPSMLDLGKQIHSQLIR----------------------IEFAADISIE--------- 218
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+L+ YV+C + A KM +K V T L+ GY ++ AL LF M G
Sbjct: 219 TLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARN-RDALLLFSKMISEGV 277
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
+ + + F +++ACA LG GK +H IK G E + S+G L++FY C F+ A
Sbjct: 278 EL-DGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAAR 336
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYG 329
+ ++ + P + ++LI G G+ + A +F + NS YN++ + +
Sbjct: 337 QAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVS 396
Query: 330 QVDDSKRLFEKMPHRSIISL----NTMISVIPEMER--------------NPVTWNSMIS 371
+ ++ + +++ + MI++ + + + V W ++I
Sbjct: 397 DLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIIC 456
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFE 430
+ + +AL+L+ M+ + TF L +ACS G +++G Q L + K
Sbjct: 457 AHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVN 516
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG 473
+ ++D+YSR G + +A S+ P+V +W +L+ G
Sbjct: 517 PTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGG 560
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 187/426 (43%), Gaps = 55/426 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A ++M ++ V+ ++ GY++ A+ ++L L S M V+L+ FS IL
Sbjct: 229 GWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIIL 288
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
CA L L GKQIH +K G E VG+ L+ FY C E A++ F+ +HE N+
Sbjct: 289 KACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDF 348
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS ++ GY Q S FD +AL++F+ +R
Sbjct: 349 SWSALIAGYCQ----SGKFD----------------------------RALEVFKTIRSK 376
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G + N + ++++ +AC+ + G +H IK G S A+I Y C D
Sbjct: 377 GV-LLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDY 435
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAV 327
A + + ++ P A ++I G+ +A +F + N +++ ++ +
Sbjct: 436 AHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSH 495
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V + K+ + M + V P ++ +N MI Y + L +AL++
Sbjct: 496 SGLVKEGKQFLDSMTDK--------YGVNPTIDH----YNCMIDIYSRAGLLLEALEV-- 541
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRC 446
+R + + ++ L C +L+ G + ++ + P +S YV + ++Y+
Sbjct: 542 -IRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYV--IMFNLYALA 598
Query: 447 GSINDA 452
G ++A
Sbjct: 599 GKWDEA 604
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 31/167 (18%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
IT + G++ A F + V+W ++C ++ K E+L L M S V+ N
Sbjct: 424 ITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNV 483
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
TF +L+ C+ + +GKQ L S + + G + NC
Sbjct: 484 VTFIGLLNACSHSGLVKEGKQF----LDSMTDKY---GVNPTIDHYNC------------ 524
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISG 190
M+ Y + L+ +A +V MP + DV+ W L+ G
Sbjct: 525 -----------MIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGG 560
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 171/495 (34%), Positives = 280/495 (56%), Gaps = 29/495 (5%)
Query: 176 MPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFC 235
MP+++VV WT +I+GY+++ G AL+ + M +SG MP+++TF S+I+AC+ LG
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQG-GNALEFYFQMLQSGV-MPDQFTFGSIIKACSSLGDIG 58
Query: 236 EGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI 295
G+ +H ++K F ALI Y A+ V+ R+ L + S+I G
Sbjct: 59 LGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFS 118
Query: 296 SMGRIEDAELIFNRL---TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
+G +A F + + +++N++I G+A YG++ D+ FE+M
Sbjct: 119 QLGYELEALCYFKEMLHQGRPDLVAWNAIIAGFA-YGELRDAIFFFEEM----------- 166
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACS 409
+ V+WN++++ ++ H++A +++ ++ + I + R T + + A +
Sbjct: 167 -----RCNADLVSWNAILTACMR---HDQAEEVFRLLKLMCISQHRPDYITLTNVLGASA 218
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
S++ G +H + +KT + V L+D+Y++CGS+ A F S+ +P+V +W++
Sbjct: 219 ETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSS 278
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSY 528
L+ GY+ G G EA+ LF+ M D+ PN TFVGVL+AC GLV EG K++ +M K +
Sbjct: 279 LILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEF 338
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ PT EH +C+VDLL R+G L+EAE FI M + D VVW LL+AC N++VG+RA
Sbjct: 339 GIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRA 398
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A+ + +D +A+V+L NIYA G W +R + V+K PG SWIE+ R+H
Sbjct: 399 AENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHV 458
Query: 649 FSVEDRNNPNCNVIY 663
F VED +P N IY
Sbjct: 459 FFVEDSLHPERNKIY 473
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 186/470 (39%), Gaps = 115/470 (24%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
MP R VVSW +++ GYS+ + +L M +S V ++ TF +I+ C+ L + G
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
+Q+H VLKS + + L+ Y I +A VF + + + W M+ G+ Q
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 120
Query: 164 NLMSDAFDVFIKM---PKKDVVVWTKLISGYAKSV------------------------- 195
+A F +M + D+V W +I+G+A
Sbjct: 121 GYELEALCYFKEMLHQGRPDLVAWNAIIAGFAYGELRDAIFFFEEMRCNADLVSWNAILT 180
Query: 196 -----DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
D E+ +L + M S ++ P+ T +V+ A A + G VH +K G
Sbjct: 181 ACMRHDQAEEVFRLLKLMCIS-QHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLN 239
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
D S+ LI+ Y C + A +++D + NP
Sbjct: 240 CDTSVTNGLIDLYAKCGSLKTAHKIFDSMINP---------------------------- 271
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
+ +S++S+I GYA +G +++ +LF+ M + V P N VT+ ++
Sbjct: 272 ---DVVSWSSLILGYAQFGYGEEALKLFKTMRR---------LDVKP----NHVTFVGVL 315
Query: 371 SGYVQNNLHEKALQLYMTMRK-LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ L E+ +LY TM K I TR CSC
Sbjct: 316 TACSHVGLVEEGWKLYGTMEKEFGIAPTREH-------CSC------------------- 349
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
+VD+ +R G +N+A+ ++ P++ W L+ HG
Sbjct: 350 ---------MVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHG 390
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 69/336 (20%)
Query: 32 GQLVTARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
G+L A F++M +VSWN +L + + +E L+ M S + + T + +
Sbjct: 154 GELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNV 213
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L A+ S+ G Q+HC LK+G C V +GL+ YA C ++ A ++FD + +
Sbjct: 214 LGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDV 273
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ WS +++GY Q GY E+ALKLF+ MR
Sbjct: 274 VSWSSLILGYAQF--------------------------GYG------EEALKLFKTMRR 301
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC---- 266
+ PN TF V+ AC+ +G EG ++G + K EF G A +C C
Sbjct: 302 L-DVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEK---EF----GIAPTREHCSCMVDL 353
Query: 267 ----------------EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
AFD + V+ L C N + +G+ AE I ++
Sbjct: 354 LARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGN------VDVGK-RAAENIL-KI 405
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
+NS ++ + YA G +D RL M R +
Sbjct: 406 DPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGV 441
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
TN I + G L TA +FD M VVSW++++ GY+++ +E+L L TM R +V
Sbjct: 245 TNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDV 304
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIH 107
K N TF +L+ C+ + + +G +++
Sbjct: 305 KPNHVTFVGVLTACSHVGLVEEGWKLY 331
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/698 (27%), Positives = 337/698 (48%), Gaps = 100/698 (14%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
++ R+G A+++F + + V+ N ++ G + F E + R+ V +N
Sbjct: 317 VSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVR-QDFSEEAVKIFVGTRNTVDVNA 375
Query: 85 TTFSTILSVCAQLN----SLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEAK 139
T+ +LS A+ + L G+ +H +L++G + V +GL+ YA C IE A
Sbjct: 376 DTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESAS 435
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
++ F M D + W +IS ++ CE
Sbjct: 436 KI-------------------------------FQLMEATDRISWNTIISALDQN-GNCE 463
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+A+ + MR+S + P+ + S + +CA L G+ VH +K G + D S+ L
Sbjct: 464 EAVMHYSLMRQSCIS-PSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVL 522
Query: 260 IEFYCGCEAFDGAMRVYDRL------------------ENPC---LNASNSLING----- 293
++ Y C A +V++ + + P + N+++ G
Sbjct: 523 VKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPN 582
Query: 294 ---------------LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLF 338
++ +G+ A ++ + + E N + N++I YA G + + LF
Sbjct: 583 KVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVD-NALISCYAKSGDMGSCEHLF 641
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
M R R+ ++WNSMISGY+ N ++A+ M
Sbjct: 642 TNMSDR----------------RDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDC 685
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
TFS++ +AC+ + +L++G LHA +++ ES+V V ++LVDMYS+CG ++ A F+S
Sbjct: 686 CTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNS 745
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
++ N +W ++++GY+ HGLG +A+ +FE ML P+ TFV VLSAC AGLV G
Sbjct: 746 MTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERG 805
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
++ F M +G++P +EHY+CV+DLLGR+G + + +E+I+ MPIE +A++W +L AC
Sbjct: 806 LEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQ 865
Query: 579 ---WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
N+++G A++ + ++ + YV+ SN +A G W R + KK+
Sbjct: 866 SKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEA 925
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
G SW+ LN VH F DR++PN IY L L N+
Sbjct: 926 GRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNI 963
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 143/602 (23%), Positives = 246/602 (40%), Gaps = 74/602 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR---S 78
N + + +L A +FD+MP R VSW ++ GY +E+ + M R +
Sbjct: 100 NHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQA 159
Query: 79 NVKLNETTFSTILSVCAQ--LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ TF T+L C + L Q+H LV K+ Y V + L+ Y +C
Sbjct: 160 GCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGP 219
Query: 137 E--AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
A+RVFD P +D++ W L+S YAK
Sbjct: 220 PILAQRVFD-------------------------------GTPIRDLITWNALMSVYAKK 248
Query: 195 VDGCEKALKLFRWMRESGENM---PNEYTFDSVIRACARLGAFCEGKVVHGLLI---KCG 248
D LF+ M+ + P E+TF S+I A + V+ +L+ K G
Sbjct: 249 GD-VASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSG--SSAVLDQVLVWVLKSG 305
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF- 307
D +G AL+ + D A ++ L+ N LI GL+ E+A IF
Sbjct: 306 CSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFV 365
Query: 308 --NRLTEANSISYNSMIKGYAVY---------GQVDDSKRLFEKMPHRSIISLNTMISVI 356
+ N+ +Y ++ A Y G+V L + I N ++++
Sbjct: 366 GTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMY 425
Query: 357 PE-------------ME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
+ ME + ++WN++IS QN E+A+ Y MR+ I +
Sbjct: 426 AKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALI 485
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+C+ L L GQ +H VK + + V LV MY CG+++D F+S++
Sbjct: 486 SSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEH 545
Query: 463 NVAAWTALMNGY-SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+ +W +M S SE V +F M+ ++PN TF+ +L+A ++ G ++
Sbjct: 546 DEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQV 605
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMN 581
++ +GV+ ++ +SG + E +M DA+ W +++S + N
Sbjct: 606 HAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGN 665
Query: 582 ME 583
++
Sbjct: 666 LQ 667
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 115/526 (21%), Positives = 214/526 (40%), Gaps = 108/526 (20%)
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
+ +H ++K G F+ + L+ YA + A +VFDE+ E N + W+ ++ GYV
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+ +AF VF M ++ GC P +TF +
Sbjct: 141 GIAEEAFRVFRAMLREVQA--------------GCR----------------PTSFTFGT 170
Query: 224 VIRACA-----RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG--AMRVY 276
++RAC RLG + VHGL+ K + + ++ ALI Y C A RV+
Sbjct: 171 LLRACQDGGPDRLGFAVQ---VHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVF 227
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI--------SYNSMI------ 322
D L N+L++ G + +F + +S ++ S+I
Sbjct: 228 DGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLS 287
Query: 323 ------------------------------KGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
+A +G D++K +F +SL
Sbjct: 288 SGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIF--------LSLK-- 337
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
++N VT N +I G V+ + E+A+++++ R +D T+ VL A +
Sbjct: 338 -------QKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRN-TVDVNADTYVVLLSALAEYS 389
Query: 413 ----SLQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
L+ G+++H H+++T + + V LV+MY++CG+I A F + + + +W
Sbjct: 390 ISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISW 449
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
+++ +G EAV+ + +M + I P+ + LS+C L+ G ++
Sbjct: 450 NTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVK 509
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+G+ +V + G G + + + M E D V W ++
Sbjct: 510 WGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMA-EHDEVSWNTMM 554
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 201/499 (40%), Gaps = 98/499 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I +N + + G + +A +F M +SWNT++ + +E++ S M +
Sbjct: 415 IAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQ 474
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S + + + LS CA L L G+Q+HC +K G + V + L+ Y C + +
Sbjct: 475 SCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSD 534
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+VF+ + E +E+ W+ M+ +M+ + + P ++V
Sbjct: 535 YWKVFNSMAEHDEVSWNTMM------GVMASS-----QTPISEIV--------------- 568
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
K+F M G +PN+ TF +++ A + L GK VH ++K G D +
Sbjct: 569 -----KVFNNMMRGGL-IPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDN 622
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDA------------- 303
ALI Y ++ + + S NS+I+G I G +++A
Sbjct: 623 ALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQI 682
Query: 304 ------ELIFNRLT--------------------EANSISYNSMIKGYAVYGQVDDSKRL 337
+I N E++ + ++++ Y+ G+VD + +L
Sbjct: 683 MDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKL 742
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
F M R+ S N SMISGY ++ L KA++++ M +
Sbjct: 743 FNSMTQRNEFSWN-----------------SMISGYARHGLGRKAIEIFEEMLRSRESPD 785
Query: 398 RSTFSVLFHACSCLGSLQQG----QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
TF + ACS G +++G +++ H + E + ++D+ R G I+ +
Sbjct: 786 HVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHY----SCVIDLLGRAGKIDKIK 841
Query: 454 ASFSSIS-SPNVAAWTALM 471
+ PN W ++
Sbjct: 842 EYIQRMPIEPNALIWRTVL 860
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 157/376 (41%), Gaps = 43/376 (11%)
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
+H LIK G D + L+ Y A +V+D + + L++G + G
Sbjct: 83 LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142
Query: 300 IEDAELIFNRL-------TEANSISYNSMIK----------GYA--VYGQVDDSKRLFEK 340
E+A +F + S ++ ++++ G+A V+G V ++
Sbjct: 143 AEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNT 202
Query: 341 MPHRSIISLNTMISVIPEME----------RNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
++IS+ +V P + R+ +TWN+++S Y + L+ M+
Sbjct: 203 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQ 262
Query: 391 ----KLAIDRTRSTFSVLFHACSCLGSLQQ--GQLLHAHLVKTPFESNVYVGTSLVDMYS 444
++ + T TF L A S Q+L ++K+ S++YVG++LV ++
Sbjct: 263 RGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVL-VWVLKSGCSSDLYVGSALVSAFA 321
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
R G ++A+ F S+ N L+ G EAV +F + + NA T+V
Sbjct: 322 RHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIF-VGTRNTVDVNADTYVV 380
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC-----VVDLLGRSGHLHEAEEFIKD 559
+LSA + EG++I R + + + L +V++ + G + A + +
Sbjct: 381 LLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQL 440
Query: 560 MPIELDAVVWGALLSA 575
M D + W ++SA
Sbjct: 441 ME-ATDRISWNTIISA 455
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 16/174 (9%)
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
G + LH L+K ++++ LV+ Y++ + A F + N +WT L+
Sbjct: 75 GDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLV 134
Query: 472 NGYSHHGLGSEAVLLFEIMLEQ---DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
+GY HG+ EA +F ML + P + TF +L AC G G + + +
Sbjct: 135 SGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAV----QVH 190
Query: 529 GVVPTLEHYT------CVVDLLGRS--GHLHEAEEFIKDMPIELDAVVWGALLS 574
G+V E+ + ++ + G G A+ PI D + W AL+S
Sbjct: 191 GLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIR-DLITWNALMS 243
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 278/548 (50%), Gaps = 68/548 (12%)
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
K +V W +I+ A+ D E AL+ F +R+ G +P +F I++C+ L G
Sbjct: 1977 KSNVHSWNSVIADLARGGDSVE-ALRAFSSLRKLGL-IPTRSSFPCTIKSCSALCDLVSG 2034
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
++ H GFE D + ALI+ Y C A ++D + + + S+I G +
Sbjct: 2035 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 2094
Query: 298 GRIEDAELIFNRLTE-------ANSISY-------------------------------- 318
+ ++A L+F E N++
Sbjct: 2095 EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKG 2154
Query: 319 --------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
N+++ YA GQ SK++F+ M E++ ++WNSMI
Sbjct: 2155 FDGSIGVGNTLMDAYAKCGQPLVSKKVFDWME-----------------EKDDISWNSMI 2197
Query: 371 SGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ Y Q+ L +AL+++ M R + + T S + AC+ G+L+ G+ +H ++K
Sbjct: 2198 AVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDL 2257
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
E NV VGTS++DMY +CG + A+ +F + NV +WTA++ GY HG EA+ +F
Sbjct: 2258 EYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYK 2317
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSG 548
M+ + PN TFV VL+AC AGLV EG F +MK Y + P +EHY C+VDL GR+G
Sbjct: 2318 MVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAG 2377
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L+EA IK M ++ D VVWG+LL AC N+++GE AAQK+F LD YV+LSN
Sbjct: 2378 CLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSN 2437
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YA G+W +R + + ++ K PG S +EL RVH F V D+ +P+ +IY LE
Sbjct: 2438 LYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEK 2497
Query: 669 LTANLNSV 676
LT L +
Sbjct: 2498 LTLELQKI 2505
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 230/486 (47%), Gaps = 89/486 (18%)
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R N++ + F +L C L +QIH +++SG + + L+ Y+ I
Sbjct: 22 RGNIRAKKALF--LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIA 76
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A +F ++ W+L++ A +++
Sbjct: 77 YAILLFYQIQNPCTFTWNLII---------------------------------RANTIN 103
Query: 197 G-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
G E+AL L++ M G +++TF VI+AC + GKVVHG LIK GF D +
Sbjct: 104 GLSEQALMLYKNMVCQG-IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
LI+FY C A++V++++ R+ N
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKM-------------------RVR------------NV 191
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
+S+ ++I G G + +++R+F+++P ++++S W +MI+GY++
Sbjct: 192 VSWTTVISGLISCGDLQEARRIFDEIPSKNVVS-----------------WTAMINGYIR 234
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N E+AL+L+ M+ I T L AC+ +G L G+ +H + +K E VY+
Sbjct: 235 NQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYL 294
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
GT+L+DMYS+CGSI DA F ++ ++ W +++ HGLG EA+ LF M ++
Sbjct: 295 GTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNV 354
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
P+A TF+GVL ACV V EG F M + YG+ P EHY C+ +L RS +L EA
Sbjct: 355 KPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414
Query: 555 EFIKDM 560
+ K++
Sbjct: 415 KSTKEV 420
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 177/390 (45%), Gaps = 64/390 (16%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
ET + ++ I + GQL AR LFD++P+R VVSW +M+ GY + + D +L L
Sbjct: 2047 ETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKD 2106
Query: 75 M--------HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
+NV L+ ++LS C++++ + +H V+K G++ VG+ L+
Sbjct: 2107 FLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLM 2166
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
YA C + +K+VFD + E +++ W+ M+ Y Q L +A +VF M + V +
Sbjct: 2167 DAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRY-- 2224
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
N T +V+ ACA GA GK +H +IK
Sbjct: 2225 ------------------------------NAVTLSAVLLACAHAGALRAGKCIHDQVIK 2254
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
E++ +G ++I+ YC C + A + +DR++ + + +++ G GR ++A I
Sbjct: 2255 MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDI 2314
Query: 307 FNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS-------------- 348
F ++ A N I++ S++ + G V++ F M H+ I
Sbjct: 2315 FYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFG 2374
Query: 349 ----LNTMISVIPEMERNP--VTWNSMISG 372
LN ++I M+ P V W S++
Sbjct: 2375 RAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 2404
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 151/295 (51%), Gaps = 4/295 (1%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
T K I +G++ A LF Q+ +WN ++ + +++L L M +
Sbjct: 62 TRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGI 121
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
++ TF ++ C S+ GK +H ++K G+ FV + L+ FY C A +
Sbjct: 122 AADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALK 181
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF+++ N + W+ ++ G + C + +A +F ++P K+VV WT +I+GY ++ E+
Sbjct: 182 VFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQP-EE 240
Query: 201 ALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
AL+LF+ M+ EN+ PNEYT S+I+AC +G G+ +H IK E +G AL
Sbjct: 241 ALELFKRMQ--AENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTAL 298
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
I+ Y C + A+ V++ + L NS+I L G ++A +F+ + N
Sbjct: 299 IDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVN 353
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 42/252 (16%)
Query: 361 RNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+NP TWN +I N L E+AL LY M I + TF + AC+ S+ G+
Sbjct: 86 QNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGK 145
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCG------------------------------- 447
++H L+K F +V+V +L+D Y +CG
Sbjct: 146 VVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCG 205
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
+ +A+ F I S NV +WTA++NGY + EA+ LF+ M ++I PN T V ++
Sbjct: 206 DLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIK 265
Query: 508 ACVRAGLVNEGMKIFRSMKSYGVVPTLE----HYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
AC G++ G R + Y + +E T ++D+ + G + +A E + MP +
Sbjct: 266 ACTEMGILTLG----RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK 321
Query: 564 LDAVVWGALLSA 575
W +++++
Sbjct: 322 -SLPTWNSMITS 332
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 33/206 (16%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD++P + VVSW M+ GY + + +E+L L M N+ NE T +++
Sbjct: 205 GDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLI 264
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C ++ L G+ IH +K+ E ++G+ L+ Y+ C I+
Sbjct: 265 KACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK--------------- 309
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
DA +VF MP+K + W +I+ G E AL LF M E
Sbjct: 310 ----------------DAIEVFETMPRKSLPTWNSMITSLGVHGLGQE-ALNLFSEM-ER 351
Query: 212 GENMPNEYTFDSVIRACARLGAFCEG 237
P+ TF V+ AC + EG
Sbjct: 352 VNVKPDAITFIGVLCACVHIKNVKEG 377
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 4/172 (2%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
L C L+Q +HA ++++ ++ + L+ +YS G I A F I +P
Sbjct: 33 LLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
W ++ + +GL +A++L++ M+ Q I + TF V+ AC ++ G +
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
S+ YG + ++D + GH A + + M + + V W ++S
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISG 200
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 188/575 (32%), Positives = 302/575 (52%), Gaps = 60/575 (10%)
Query: 85 TTFST--ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF---YANCFEIEEAK 139
T ST ++SV + SL + +QIH ++K+ +F S L+ F ++ A
Sbjct: 2 TAISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYAS 61
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS--GYAKSVDG 197
VF + N ++ ++ G+ SD + P + ++++ +++S Y+ V
Sbjct: 62 SVFSRIQHPNSFIFFALIKGF------SDTSN-----PVESLILYARMLSCLNYSSGV-- 108
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E++ SV++AC +L AF EG+ VHG ++K FD +G
Sbjct: 109 --------------------EFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGN 148
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
+++ Y + A RV+DR+ N + + NS+I G + G IE A +F+ + E + +S
Sbjct: 149 SMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPERDLVS 208
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
N+MI GY G+ + ++++FE M + + VTW SMIS YVQN
Sbjct: 209 CNAMIDGYGKCGRCELAEKVFETMSDKDV-----------------VTWTSMISAYVQNR 251
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE-SNVYVG 436
KAL L+ M L + + A + LG +++G+ LHA++ E S+ ++G
Sbjct: 252 CPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIG 311
Query: 437 TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
++L+DMYS+CG I +A F SIS N+ W ++++G + HGL EA+ +F M DI
Sbjct: 312 SALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDI 371
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
PN TF+G+LS C GLV EG F SM + Y +VP ++HY C++DL GR+G L +A
Sbjct: 372 EPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDAL 431
Query: 555 EFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
I++MP E D + W A+LSA ++E+G+ AA + L S+YV+LSNIYA G
Sbjct: 432 GVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAG 491
Query: 615 KWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+W IR + VKK GCS + +B +VH F
Sbjct: 492 RWDDVAKIRLMMRQRGVKKIAGCSSMLVBGKVHEF 526
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 137/567 (24%), Positives = 229/567 (40%), Gaps = 136/567 (23%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-----HRSNVKLN 83
G +G L A ++F ++ + ++ G+S + ESL L + M + S V
Sbjct: 52 GVSGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGV--- 108
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
E + ++L C +L + +G+Q+H VLK+ FVG+ ++ Y + EIE A+RVFD
Sbjct: 109 EFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFD 168
Query: 144 ELHEDNELLWSLMLVGY---------------------VQCNLMSDAF----------DV 172
+ + + W+ M+ GY V CN M D + V
Sbjct: 169 RMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKV 228
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSVIRACARL 231
F M KDVV WT +IS Y + + C KAL LFR M G P+ SV+ A A L
Sbjct: 229 FETMSDKDVVTWTSMISAYVQ--NRCPMKALDLFREMLSLGLR-PDGPAIVSVLSAIADL 285
Query: 232 GAFCEGKVVHGLLIKCGFEFDES-IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSL 290
G EGK +H + E IG ALI+ Y C
Sbjct: 286 GFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKC------------------------ 321
Query: 291 INGLISMGRIEDAELIFNRLTEANSI-SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
G IE+A +F ++ +I +NSMI G A++G ++ +F +M I
Sbjct: 322 -------GYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDI--- 371
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
E N +T+ ++S L E+ + +M ++ + + + C
Sbjct: 372 ----------EPNEITFLGLLSTCSHGGLVEEGQFYFESMH----EKYKIVPRIQHYGC- 416
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWT 468
++D++ R G + DA ++ ++ AW
Sbjct: 417 -----------------------------MIDLFGRAGRLEDALGVIQNMPFEADLLAWK 447
Query: 469 ALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
A+++ HG +G A L I L D +++++V + + +AG ++ KI M
Sbjct: 448 AILSASMKHGHIEIGKSAALR-AIELAPD---DSSSYVLLSNIYAKAGRWDDVAKIRLMM 503
Query: 526 KSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ GV + +VB G +HE
Sbjct: 504 RQRGVKKIAGCSSMLVB-----GKVHE 525
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 143/379 (37%), Gaps = 95/379 (25%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS N I + G++ A LFD+MP R +VS N M+ GY K + + + + TM
Sbjct: 175 VVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSD 234
Query: 78 SNV-------------------------------KLNETTFSTILSVCAQLNSLIDGKQI 106
+V + + ++LS A L + +GK +
Sbjct: 235 KDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWL 294
Query: 107 HCLVLKSGYECFE-FVGSGLLFFYANCFEIEEAKRVFDEL-HEDNELLWSLMLVGYVQCN 164
H V + E F+GS L+ Y+ C IE A VF + H N W+ M+ G
Sbjct: 295 HAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHG 354
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
L +A D+F++M + D+ PNE TF +
Sbjct: 355 LAREALDIFVEMERMDI---------------------------------EPNEITFLGL 381
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDE-----SIGGALIEFYCGCEAFDGAMRVYDRL 279
+ C+ G EG+ F F+ I + + C + F A R+ D L
Sbjct: 382 LSTCSHGGLVEEGQ----------FYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDAL 431
Query: 280 ---ENPCLNA---------SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAV 327
+N A S S+ +G I +G+ A L L +S SY + YA
Sbjct: 432 GVIQNMPFEADLLAWKAILSASMKHGHIEIGK--SAALRAIELAPDDSSSYVLLSNIYAK 489
Query: 328 YGQVDDSKRLFEKMPHRSI 346
G+ DD ++ M R +
Sbjct: 490 AGRWDDVAKIRLMMRQRGV 508
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 193/704 (27%), Positives = 336/704 (47%), Gaps = 94/704 (13%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
T + N IT G ++ A LFD+M R +SWN M+ YS + + ++S M
Sbjct: 178 THVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM 237
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
VK + TT +++SVCA + + G IH L + SG C + + L+ Y+ ++
Sbjct: 238 RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
+EA+ +F M ++DV+ W +IS Y +S
Sbjct: 298 DEAESLFR-------------------------------NMSRRDVISWNTMISSYVQS- 325
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+ C +AL+ + ++ E PN TF S + AC+ A G+ +H ++++ + I
Sbjct: 326 NSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLI 385
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLN--ASNSLINGLISMGRIEDAELIF------ 307
G +L+ Y C + + RV++ + PC + + N L G ++ + +A +F
Sbjct: 386 GNSLLTMYSKCNSMEDTERVFESM--PCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGT 443
Query: 308 ----NRLTEAN----------------------------SISY--NSMIKGYAVYGQVDD 333
N +T N S Y NS+I YA G ++
Sbjct: 444 GIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLES 503
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
S +F ++ ++S+IS WN++I+ V++ E+A++L+M +
Sbjct: 504 STGIFSRINNKSVIS-----------------WNAIIAANVRHGRGEEAIKLFMDSQHAG 546
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
R + + + L SL++G LH VK + + +V + +DMY +CG ++
Sbjct: 547 NKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCML 606
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
+ + W L++GY+ +G EA F+ M+ P+ TFV +LSAC AG
Sbjct: 607 KTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAG 666
Query: 514 LVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
L+++GM + SM ++GV P ++H C+VDLLGR G EAE+FI +MP+ + ++W +L
Sbjct: 667 LIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSL 726
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
LS+ N+++G +AA+ + LD SAYV+LSN+YA +W +R + +++
Sbjct: 727 LSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLN 786
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
K P CSW++L + V F + DR++ + IY L+ + L V
Sbjct: 787 KRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREV 830
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 139/635 (21%), Positives = 243/635 (38%), Gaps = 93/635 (14%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G G ++ A+ LF +MP R VVSW ++ S +E+L M + V N +
Sbjct: 90 GSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALA 149
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
T++S+C L + G Q+ V+ SG V + L+ + N +++A+R+FD + E
Sbjct: 150 TVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEER 209
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ M+ Y + S F V M
Sbjct: 210 DRISWNAMISMYSHEEVYSKCFIVLSDM-------------------------------- 237
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
GE P+ T S++ CA G +H L + G + AL+ Y
Sbjct: 238 -RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGK 296
Query: 269 FDGAMRVYDRLE-------NPCLNA---SNSLINGLISMGRIEDAE-------------- 304
D A ++ + N +++ SNS + L ++G++ +
Sbjct: 297 LDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALG 356
Query: 305 ----------------LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
+I R + + NS++ Y+ ++D++R+FE MP ++S
Sbjct: 357 ACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVS 416
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
N + GY A++++ MR I T L C
Sbjct: 417 CNV-----------------LTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTC 459
Query: 409 SCLGSLQQ-GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
LG L G LHA++ +T S+ Y+ SL+ MY+ CG + + FS I++ +V +W
Sbjct: 460 KSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISW 519
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
A++ HG G EA+ LF + LS+ + EGM++
Sbjct: 520 NAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVK 579
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
G+ +D+ G+ G + + + D P W L+S + + E
Sbjct: 580 NGLDCDSHVVNATMDMYGKCGKMDCMLKTLPD-PAHRPTQCWNTLISGYARYGYFKEAED 638
Query: 588 AAQKMFGLDKKP-ISAYVILSNIYAVLGKWGKKMD 621
+ M + +KP +V L + + G K MD
Sbjct: 639 TFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMD 673
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 131/577 (22%), Positives = 235/577 (40%), Gaps = 97/577 (16%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLN---SL 100
MP RT SW T + G ++ + +L+ M +V L+ +++++ C
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
G IH L ++G ++G+ LL Y + + A+R+F E+
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEM--------------- 105
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEY 219
P+++VV WT ++ A S +GC E+AL +R MR+ G M N
Sbjct: 106 ----------------PQRNVVSWTAIM--VALSSNGCMEEALVAYRRMRKEGV-MCNAN 146
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
+V+ C L G V ++ G S+ +LI + A R++DR+
Sbjct: 147 ALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRM 206
Query: 280 ENPCLNASNSLIN----------GLISMGRIEDAELIFNRLTEANSISY----------- 318
E + N++I+ I + + E+ + T + +S
Sbjct: 207 EERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGS 266
Query: 319 ------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
N+++ Y+ G++D+++ LF M R +IS
Sbjct: 267 GIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVIS------------ 314
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQL 419
WN+MIS YVQ+N +AL+ + + S TFS ACS +L G+
Sbjct: 315 -----WNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRT 369
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+HA +++ ++ + +G SL+ MYS+C S+ D + F S+ +V + L GY+
Sbjct: 370 IHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALED 429
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG-LVNEGMKIFRSMKSYGVVPTLEHYT 538
+ A+ +F M I PN T + + C G L + GM + + G++
Sbjct: 430 VANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITN 489
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ + G L E+ I + W A+++A
Sbjct: 490 SLITMYATCGDL-ESSTGIFSRINNKSVISWNAIIAA 525
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 135/333 (40%), Gaps = 39/333 (11%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
Q L++ N +T + + +F+ MP VVS N + GY+ ++ + S
Sbjct: 380 QNVLLIG-NSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFS 438
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M + +K N T + C L L G +H V ++G E++ + L+ YA C
Sbjct: 439 WMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATC 498
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
++E + +F ++ K V+ W +I+
Sbjct: 499 GDLESSTGIFSRIN-------------------------------NKSVISWNAIIAANV 527
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+ G E+A+KLF + +G N + + + + A L + EG +HGL +K G + D
Sbjct: 528 RHGRG-EEAIKLFMDSQHAG-NKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCD 585
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT- 311
+ A ++ Y C D ++ + N+LI+G G ++AE F +
Sbjct: 586 SHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVS 645
Query: 312 ---EANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ + +++ +++ + G +D + M
Sbjct: 646 VGQKPDYVTFVALLSACSHAGLIDKGMDYYNSM 678
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 13/245 (5%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
M L+A +QT + + I TN IT G L ++ +F ++ ++V+SWN ++
Sbjct: 470 MPLHAYVTQTGLLSDEYI--TNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANV 527
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ + +E++ L + KL+ + LS A L SL +G Q+H L +K+G +C
Sbjct: 528 RHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSH 587
Query: 121 VGSGLLFFYANCFEIE-EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM--- 176
V + + Y C +++ K + D H + W+ ++ GY + +A D F M
Sbjct: 588 VVNATMDMYGKCGKMDCMLKTLPDPAHRPTQ-CWNTLISGYARYGYFKEAEDTFKHMVSV 646
Query: 177 -PKKDVVVWTKLISG--YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
K D V + L+S +A +D K + + M + P ++ RLG
Sbjct: 647 GQKPDYVTFVALLSACSHAGLID---KGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGK 703
Query: 234 FCEGK 238
F E +
Sbjct: 704 FAEAE 708
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 195/702 (27%), Positives = 337/702 (48%), Gaps = 102/702 (14%)
Query: 22 NKAITECGRNGQLVTARNLFDQMP---IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
N I+ ++G A ++F+ M R VVSW+ M+ Y + +++ +
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL 160
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG-YECFEFVGSGLL-FFYANCFEIE 136
+ N+ ++ ++ C+ + + G+ ++K+G +E VG L+ F E
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A +VFD++ E N + W+LM+ +Q +A F+ M ++SG+
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM----------VLSGFES--- 267
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
+++T SV ACA L GK +H I+ G D +
Sbjct: 268 --------------------DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VE 305
Query: 257 GALIEFYCGCEA---FDGAMRVYDRLENPCLNASNSLING-----------------LIS 296
+L++ Y C A D +V+DR+E+ + + +LI G +I+
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 297 MGRIEDAELIFN------------------------RLTEANSISYNSMIKGYAVYGQVD 332
G +E F+ R +NS NS+I + +++
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
D++R FE + E+N V++N+ + G +N E+A +L + +
Sbjct: 426 DAQRAFESLS-----------------EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ + TF+ L + +GS+++G+ +H+ +VK N V +L+ MYS+CGSI+ A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
F+ + + NV +WT+++ G++ HG + F M+E+ + PN T+V +LSAC
Sbjct: 529 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588
Query: 513 GLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GLV+EG + F SM + + + P +EHY C+VDLL R+G L +A EFI MP + D +VW
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
L AC N E+G+ AA+K+ LD +AY+ LSNIYA GKW + ++R+++ +
Sbjct: 649 FLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
K+ GCSWIE+ ++H F V D +PN + IY L+ L +
Sbjct: 709 VKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 297 MGRIEDAELI-FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
+G++ A LI F+ E +S+ YNS+I Y+ G ++ +FE M
Sbjct: 80 LGKLVHARLIEFD--IEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG---------- 127
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
+R+ V+W++M++ Y N A+++++ +L + ++ + ACS +
Sbjct: 128 ----KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 416 QGQLLHAHLVKTP-FESNVYVGTSLVDMYSRC-GSINDAQASFSSISSPNVAAWTALMNG 473
G++ L+KT FES+V VG SL+DM+ + S +A F +S NV WT ++
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC----------------VRAGLVNE 517
G EA+ F M+ + T V SAC +R+GLV++
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 16/202 (7%)
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
TFS L +C + G+L+HA L++ E + + SL+ +YS+ G A+ F ++
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 460 ---SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+V +W+A+M Y ++G +A+ +F LE +VPN + V+ AC + V
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
G + G E CV +D+ + + E + D EL+ V W +
Sbjct: 184 VGRVTLGFLMKTG---HFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 573 LSACWFWMNMEVG-ERAAQKMF 593
++ C M++G R A + F
Sbjct: 241 ITRC-----MQMGFPREAIRFF 257
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 201/681 (29%), Positives = 322/681 (47%), Gaps = 62/681 (9%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-SNVKLNET-- 85
R + A LF + P RTV WN +L Y ++ E+LSL M+ S+V + E
Sbjct: 182 ARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPD 241
Query: 86 --TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
+ S L CA L L+ GK IH + K + FVGS L+ Y
Sbjct: 242 NYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYT------------- 288
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+C M+DA VF++ PK DVV+WT +ISGY +S E AL
Sbjct: 289 ------------------KCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQS-GSPELALA 329
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
F M S + P+ T SV ACA+L F G+ VHG + + G + + +L+ Y
Sbjct: 330 FFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLY 389
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYN 319
+ A ++ + + + + ++++ G D +FN + + N ++
Sbjct: 390 GKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVV 449
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ER 361
S+++ A +++ ++ E + T+ + + +M ++
Sbjct: 450 SVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKK 509
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ + W + SGY N + +++ ++ M + S LG LQQ LH
Sbjct: 510 DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLH 569
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
A ++K FE+N ++G SL+++Y++C SI DA F ++ +V W++++ Y HG G
Sbjct: 570 AFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGE 629
Query: 482 EAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTC 539
EA+ LF M D PN TF+ +LSAC +GL+ EG+ +F M Y + P EHY
Sbjct: 630 EALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAI 689
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
+VDLLGR G L A + I +MP++ +WGALL AC N+++GE AA+ +F LD
Sbjct: 690 MVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNH 749
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNC 659
Y++LSNIY+V W +R+ + + K G S +EL + V +F DR +
Sbjct: 750 AGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDES 809
Query: 660 NVIYATLEHLTANLNSVVLFD 680
+ IY L L A + V FD
Sbjct: 810 DHIYEILTKLHAKMREVA-FD 829
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 145/621 (23%), Positives = 241/621 (38%), Gaps = 125/621 (20%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN--VKLNETT 86
G Q A + F + I T + N+ L + +W M R N VKL ET
Sbjct: 101 GEGYQRDGASSRFTHLIIFTKIVENSELLKFHEW-----------LMERRNLLVKLLETC 149
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
C++L+ Q+H LK+G F+ + L YA I A ++F E
Sbjct: 150 -------CSKLSI----SQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQE-- 196
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
P + V +W L+ Y + E L LFR
Sbjct: 197 -----------------------------TPHRTVYLWNALLRSYCFEGEWVE-TLSLFR 226
Query: 207 WMRE----SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
M S E P+ Y+ +++CA L GKV+HG L K + D +G ALI+
Sbjct: 227 QMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDL 286
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS----- 317
Y C + A++V+ P + S+I+G G E A F+R+ + +S
Sbjct: 287 YTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVT 346
Query: 318 -----------------------------------YNSMIKGYAVYGQVDDSKRLFEKMP 342
NS++ Y G + ++ LF +M
Sbjct: 347 LVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS 406
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
+ IIS W++M++ Y N L L+ M I T
Sbjct: 407 DKDIIS-----------------WSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVV 449
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ AC+C+ +L++G +H V FE V T+L+DMY +C S A F+ +
Sbjct: 450 SVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKK 509
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
+V AW L +GY+ +G+ E++ +F ML P+A V +L+ G++ + + +
Sbjct: 510 DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLH 569
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
+ G ++++ + + +A + K M + D V W ++++A F
Sbjct: 570 AFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQ- 627
Query: 583 EVGERAAQKMFGL----DKKP 599
GE A + + + D KP
Sbjct: 628 --GEEALKLFYQMANHSDTKP 646
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 205/497 (41%), Gaps = 100/497 (20%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNE 84
T+CG Q+ A +F + P VV W +++ GY + + +L+ S M S V +
Sbjct: 288 TKCG---QMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDP 344
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
T ++ S CAQL++ G+ +H V + G + + + LL Y I+ A +F E
Sbjct: 345 VTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFRE 404
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ + + + WS M+ Y +D D+F +M K +
Sbjct: 405 MSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRI----------------------- 441
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
PN T SV+RACA + EG +H L + GFE + ++ AL++ Y
Sbjct: 442 ----------KPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYM 491
Query: 265 GCEAFDGAMRVYDRL----------------ENPCLNASNSLINGLISMGRIEDAELIFN 308
C + + A+ +++R+ +N ++ S + ++S G DA +
Sbjct: 492 KCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVK 551
Query: 309 RLT-----------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
LT E N S+I+ YA ++D+ ++F+ M ++
Sbjct: 552 ILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKD 611
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVL 404
+ VTW+S+I+ Y + E+AL+L+ M + + + TF +
Sbjct: 612 V-----------------VTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISI 654
Query: 405 FHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN---DAQASFSSIS 460
ACS G +++G + + K + N +VD+ R G ++ D + +
Sbjct: 655 LSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQA 714
Query: 461 SPNVAAWTALMNGYSHH 477
P++ W AL+ H
Sbjct: 715 GPDI--WGALLGACRIH 729
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 200/666 (30%), Positives = 323/666 (48%), Gaps = 78/666 (11%)
Query: 52 WNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL 111
WN+++ + +L+ + M V N TF +L CA L L+ Q+H +
Sbjct: 21 WNSLIAKNAT-QNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLT 79
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
+ G F + L+ Y C A +VFDE+ E +
Sbjct: 80 RLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGS---------------------- 117
Query: 172 VFIKMPKKDVVVWTKLISGYAKS--VDGCEKALKLFRWMR--ESGENMP-NEYTFDSVIR 226
DVV WT LIS Y+ + VD KA RWMR + E + + +++
Sbjct: 118 -------VDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVS 170
Query: 227 ACA-RLGAFC--EGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD--RLEN 281
ACA G+ C G VHGL++K GF +G +++ Y C+ GA RV++ +E
Sbjct: 171 ACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQ 230
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLT-------EANSISYNSMIKGYAVYGQVDDS 334
+ + NSLI+G G E A F + E N ++ +++K A G V+ S
Sbjct: 231 RDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETS 290
Query: 335 KRLFEKMP--HRSIISLNTMISVIPEME--------------------RNPVTWNSMISG 372
+ E + H S++ ++ + ++ +N V W++MI+G
Sbjct: 291 SWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAG 350
Query: 373 YVQNNLHEKALQLYM------TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
Y Q + E+AL+L+ M + + T + ACS LG+ + ++H + V
Sbjct: 351 YEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVA 410
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSI--SSPNVAAWTALMNGYSHHGLGSEAV 484
T + + + ++L+DM ++CG I + FS + S+ V +W++++ HG G A+
Sbjct: 411 TGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRAL 470
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDL 543
LF M PN T++ VLSAC AGLV +G F SM K YG+ PT +HY C+VDL
Sbjct: 471 ELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDL 530
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
LGR+GHL EA I +MPI+ D +WG+LL+AC N ++GE +K+ LD + +
Sbjct: 531 LGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHH 590
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
V+L+N+Y G+W + +R L ++K PG S+IE+ + V++F EDR++P +IY
Sbjct: 591 VLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIY 650
Query: 664 ATLEHL 669
L+ L
Sbjct: 651 KELDGL 656
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 193/451 (42%), Gaps = 55/451 (12%)
Query: 176 MPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP-NEYTFDSVIRACARLGAF 234
+ KD W LI+ A + AL F R +P N +TF ++++ACA L
Sbjct: 13 ISHKDTFHWNSLIAKNA--TQNPQTALTFF--TRMQAHAVPSNNFTFPALLKACAALRRL 68
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN--SLIN 292
VH L + G D AL++ Y C A +V+D + ++ + +LI+
Sbjct: 69 LPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALIS 128
Query: 293 GLISMGRIEDAELIFNRL------------------------TEANSISYNSMIKGYAVY 328
S G +++A F R+ A N + +G AV+
Sbjct: 129 AYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVH 188
Query: 329 GQVDD-----SKRLFEKMPH-----RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
G V S L M H + + + + IP +R+ V+WNS+ISG+ N
Sbjct: 189 GLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGE 248
Query: 379 HEKALQLYMTM---RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP----FES 431
E+AL+ + M A++ R T L +C+ LG ++ +H ++
Sbjct: 249 AERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAK 308
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+V V T+L+DM++RCG++ A+ F + NV W+A++ GY EA+ LF ML
Sbjct: 309 DVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQML 368
Query: 492 EQ------DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
+ ++ PNA T V V++AC R G I + + G+ + ++D+
Sbjct: 369 MEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCA 428
Query: 546 RSGHLHEAEEFIKDMPIELDAVV-WGALLSA 575
+ G + + +M VV W +++ A
Sbjct: 429 KCGDIEHGRQVFSEMDESTRTVVSWSSMIGA 459
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 117/507 (23%), Positives = 201/507 (39%), Gaps = 94/507 (18%)
Query: 29 GRNGQLVTARNLFDQMPIRTV--VSWNTMLCGYSKWAKFDESLSLVSTMH-------RSN 79
G+ G A +FD+MP +V VSW ++ YS DE+ M
Sbjct: 98 GKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSEC 157
Query: 80 VKLNETTFSTILSVCA---QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
++ + ++S CA N L G +H LV+K G+ +G+ ++ Y+ C ++
Sbjct: 158 CGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVG 217
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A RVF+ I + ++DVV W LISG+ + +
Sbjct: 218 GAWRVFNG-----------------------------IPIEQRDVVSWNSLISGFTLNGE 248
Query: 197 GCEKALKLFRWMRESGENM--PNEYTFDSVIRACARLGAFCEGKVVH--------GLLIK 246
E+AL+ F M G + PN T +++++CA LG VH LL+
Sbjct: 249 A-ERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVA 307
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
D + AL++ + C A ++D +E + +++I G E+A +
Sbjct: 308 ----KDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRL 363
Query: 307 FNR-LTEANSISYN------------------------SMIKGYAVYGQVDDSKRLFEKM 341
F + L E N + SMI YAV +D R+ +
Sbjct: 364 FRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASAL 423
Query: 342 PHR-----SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
I + S + E R V+W+SMI + ++AL+L+ MR +
Sbjct: 424 IDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEP 483
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDA 452
T+ + ACS G ++QG+ + K +P + LVD+ R G +++A
Sbjct: 484 NEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHY---ACLVDLLGRAGHLDEA 540
Query: 453 QASFSSIS-SPNVAAWTALMNGYSHHG 478
++ ++A W +L+ HG
Sbjct: 541 HNVILNMPIKADLALWGSLLAACHLHG 567
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 177/467 (37%), Gaps = 109/467 (23%)
Query: 37 ARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLVSTM---HRSNVKLNETTFSTIL 91
A +F+ +PI R VVSWN+++ G++ + + +L M S V+ N T +L
Sbjct: 219 AWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALL 278
Query: 92 SVCAQLNSLIDGKQIH---------CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
CA+L + +H LV K V + LL +A C + A+ +F
Sbjct: 279 KSCAELGCVETSSWVHEYISSRHSSLLVAKD-----VVVLTALLDMHARCGNLALAREIF 333
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
D + N + WS M+ GY Q + P E+AL
Sbjct: 334 DGVEGKNVVCWSAMIAGYEQGSC-----------P---------------------EEAL 361
Query: 203 KLFRWMRESG-----ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+LFR M G E PN T SVI AC+RLGA ++H + G + D I
Sbjct: 362 RLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIAS 421
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS-- 315
ALI+ C G IE +F+ + E+
Sbjct: 422 ALIDMCAKC-------------------------------GDIEHGRQVFSEMDESTRTV 450
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
+S++SMI ++G+ + LF +M E N +T+ S++S
Sbjct: 451 VSWSSMIGAEGIHGEGKRALELFSEMR-------------TGGYEPNEITYISVLSACSH 497
Query: 376 NNLHEKALQLYMTMRK-LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
L E+ + +M K + T ++ L G L + H ++ P ++++
Sbjct: 498 AGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEA---HNVILNMPIKADLA 554
Query: 435 VGTSLV---DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+ SL+ ++ C + S+ S +V L N Y G
Sbjct: 555 LWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAG 601
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 148/360 (41%), Gaps = 63/360 (17%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN------VKLN 83
R G L AR +FD + + VV W+ M+ GY + + +E+L L M VK N
Sbjct: 322 RCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPN 381
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
T ++++ C++L + IH + +G + + S L+ A C +IE ++VF
Sbjct: 382 AVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFS 441
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
E+ E + VV W+ +I +G ++AL+
Sbjct: 442 EMDEST-----------------------------RTVVSWSSMIGAEGIHGEG-KRALE 471
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
LF MR G PNE T+ SV+ AC+ G +GK + E D + +
Sbjct: 472 LFSEMRTGGYE-PNEITYISVLSACSHAGLVEQGKSCFNSM-----EKDYGMSPTGKHYA 525
Query: 264 CGCEAFDGAMRVYDRLENPCLNAS--------NSLINGLISMGRIEDAELIFNRL--TEA 313
C + A + D N LN SL+ G + E++ ++ ++
Sbjct: 526 CLVDLLGRAGHL-DEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDS 584
Query: 314 NSISYNSMIKG-YAVYGQVDDSKRL--------FEKMPHRSIISL-NTMISVIPEMERNP 363
NS+ ++ ++ Y G+ DD R+ K+P +S I + N + S + E +P
Sbjct: 585 NSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHP 644
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 10 TLMTQETLIVSTNKAITECGRNGQLVTARNLFDQM--PIRTVVSWNTMLCGYSKWAKFDE 67
T + Q+ I S I C + G + R +F +M RTVVSW++M+ +
Sbjct: 411 TGLDQDARIASA--LIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKR 468
Query: 68 SLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
+L L S M + NE T+ ++LS C+ + GK
Sbjct: 469 ALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGK 505
>gi|225468012|ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 602
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 193/620 (31%), Positives = 302/620 (48%), Gaps = 115/620 (18%)
Query: 60 SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
+K A E+L M+ S K + T L+ CA+L + G QIH ++++G+E
Sbjct: 77 AKHANVREALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNL 136
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
F+ S L+ YA C I +AKRVFD M K
Sbjct: 137 FLNSALVDLYAKCDAIVDAKRVFD-------------------------------GMEKH 165
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA-FCEGK 238
D V WT +ISG++K+ G ++A+ F+ M S + PN T+ SVI AC L F +
Sbjct: 166 DQVSWTSIISGFSKNGRG-KEAILFFKEMLGS-QIKPNCVTYVSVISACTGLETIFDQCA 223
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
++H ++K GF + LI+ Y C G
Sbjct: 224 LLHAHVVKLGFGVKTFVVSCLIDCYSKC-------------------------------G 252
Query: 299 RIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE 358
RI+ A L+F E ++I +NSMI GY+
Sbjct: 253 RIDQAVLLFGTTIERDNILFNSMISGYS-------------------------------- 280
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
QN E+AL+L++ MR ++ T T + + +AC L LQQG+
Sbjct: 281 ----------------QNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGR 324
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H+ + K ESNV+V ++L+DMYS+CGSI++A+ F N WT+++ GY+ G
Sbjct: 325 QVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQSG 384
Query: 479 LGSEAVLLFE-IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEH 536
G E + LFE ++ E+ P+ F VL+AC AG +++G+ F M + YG+VP L+
Sbjct: 385 RGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQ 444
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
Y C+VDL R+GHL +A+E ++ +P E ++V+WG+ LS+C + E+G AA K+F ++
Sbjct: 445 YACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKME 504
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
+ YV +++IYA G W + ++IRK + ++K G SW+E++ RVH F V D ++
Sbjct: 505 PCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVHVFLVADASH 564
Query: 657 PNCNVIYATLEHLTANLNSV 676
P I LE L + V
Sbjct: 565 PRSRDICVELERLNLEMKEV 584
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 205/505 (40%), Gaps = 125/505 (24%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
+V A+ +FD M VSW +++ G+SK + E++ M S +K N T+ +++S
Sbjct: 152 IVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSVISA 211
Query: 94 CAQLNSLIDG-KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
C L ++ D +H V+K G+ FV S L+ Y+ C I++A +F E + +L
Sbjct: 212 CTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNIL 271
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
++ M+ GY Q NL E+ALKLF MR +G
Sbjct: 272 FNSMISGYSQ-NLFG-------------------------------EEALKLFVEMRNNG 299
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
N P ++T S++ AC L +G+ VH L+ K G E + + AL++ Y C
Sbjct: 300 LN-PTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKC------ 352
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD 332
G I++A +F++ E N++ + SMI GYA G+
Sbjct: 353 -------------------------GSIDEARCVFDQAVEKNTVLWTSMITGYAQSGRGP 387
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK- 391
+ LFE+ L T P+ + + ++++ +K + + MR+
Sbjct: 388 EGLGLFER--------LVTEEGFTPDH----ICFTAVLTACNHAGFLDKGIDYFNQMRRD 435
Query: 392 --LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
L D + +AC LVD+Y R G +
Sbjct: 436 YGLVPDLDQ-------YAC------------------------------LVDLYVRNGHL 458
Query: 450 NDAQASFSSIS-SPNVAAWTALMNG---YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
A+ +I PN W + ++ Y LG EA M P +V +
Sbjct: 459 RKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAP----YVAM 514
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGV 530
S +AGL +E ++I + MK G+
Sbjct: 515 ASIYAQAGLWSEVVEIRKLMKQKGL 539
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
++CGR Q V LF R + +N+M+ GYS+ +E+L L M + + +
Sbjct: 249 SKCGRIDQAVL---LFGTTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDH 305
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T ++IL+ C L L G+Q+H LV K G E FV S LL Y+ C I+EA+ VFD+
Sbjct: 306 TLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQA 365
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK-----DVVVWTKLISG--YAKSVDGC 198
E N +LW+ M+ GY Q + +F ++ + D + +T +++ +A +D
Sbjct: 366 VEKNTVLWTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLD-- 423
Query: 199 EKALKLFRWMRESGENMPN 217
K + F MR +P+
Sbjct: 424 -KGIDYFNQMRRDYGLVPD 441
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 191/658 (29%), Positives = 311/658 (47%), Gaps = 102/658 (15%)
Query: 22 NKAITECGRNGQLVTARNLFD-----QMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
N ++ R G + A+ LF +P VV+WNTM+ + + E++ ++ M
Sbjct: 202 NALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMV 261
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG-YECFEFVGSGLLFFYANCFEI 135
V+ + TF++ L C+QL L G+++H VLK FV S L+ YA+ +
Sbjct: 262 ARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERV 321
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS- 194
A+ VFD + ++ + +W +I GYA++
Sbjct: 322 GAARLVFD-----------------------------MVPAGERQLGLWNAMICGYAQAG 352
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+D E AL+LF M +P+E T V+ +CAR F + VHG ++K G +
Sbjct: 353 LD--EDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPF 410
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+ AL++ Y +G ++ A IF + +
Sbjct: 411 VQNALMDLYA-------------------------------RLGDMDAARWIFATIEPRD 439
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
+S+N++I G V G + D+ +L +M + + I + PV V
Sbjct: 440 VVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPV---------V 490
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
NN+ T L C+ L + +G+ +H + V+ +S+V
Sbjct: 491 PNNI---------------------TLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVA 529
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
VG++LVDMY++CG + ++A F + NV W L+ Y HGLG EA+ LF+ M+ D
Sbjct: 530 VGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASD 589
Query: 495 IV-PNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHE 552
PN TF+ L+AC +G+V+ G+++FRSMK ++GV PT + + C VD+LGR+G L E
Sbjct: 590 EAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDE 649
Query: 553 AEEFIKDM-PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
A I M P E W + L AC N+ +GE AA+++F L+ S YV+L NIY+
Sbjct: 650 AYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASHYVLLCNIYS 709
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
G W K ++R R+ V K+PGCSWIEL+ +H F + +P +++A ++ L
Sbjct: 710 AAGLWEKSSEVRSRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDAL 767
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 29/260 (11%)
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
DR P S + + L ++ I A L + L N+++ YA G + +
Sbjct: 56 DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
LF+ MP R ++ N++I+ + R W + L L +
Sbjct: 116 LFDAMPSRDAVTFNSLIAALCLFRR----WLPALDALRDMLLEGHPLTSF---------- 161
Query: 397 TRSTFSVLFHACSCLG-SLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDAQ 453
+ SVL ACS L L+ G+ HA +K F + +L+ MY+R G ++DAQ
Sbjct: 162 --TLVSVLL-ACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQ 218
Query: 454 ASFSSISSPNVAA-----WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
F S+ + +V W +++ G EA+ + M+ + + P+ TF L A
Sbjct: 219 TLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPA 278
Query: 509 CVRAGLVNEGMKIFRSMKSY 528
C + +++ G R M +Y
Sbjct: 279 CSQLEMLSLG----REMHAY 294
>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 993
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 193/704 (27%), Positives = 336/704 (47%), Gaps = 94/704 (13%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
T + N IT G ++ A LFD+M R +SWN M+ YS + + ++S M
Sbjct: 178 THVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM 237
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
VK + TT +++SVCA + + G IH L + SG C + + L+ Y+ ++
Sbjct: 238 RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
+EA+ +F M ++DV+ W +IS Y +S
Sbjct: 298 DEAESLFR-------------------------------NMSRRDVISWNTMISSYVQS- 325
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+ C +AL+ + ++ E PN TF S + AC+ A G+ +H ++++ + I
Sbjct: 326 NSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLI 385
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLN--ASNSLINGLISMGRIEDAELIF------ 307
G +L+ Y C + + RV++ + PC + + N L G ++ + +A +F
Sbjct: 386 GNSLLTMYSKCNSMEDTERVFESM--PCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGT 443
Query: 308 ----NRLTEAN----------------------------SISY--NSMIKGYAVYGQVDD 333
N +T N S Y NS+I YA G ++
Sbjct: 444 GIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLES 503
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
S +F ++ ++S+IS WN++I+ V++ E+A++L+M +
Sbjct: 504 STGIFSRINNKSVIS-----------------WNAIIAANVRHGRGEEAIKLFMDSQHAG 546
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
R + + + L SL++G LH VK + + +V + +DMY +CG ++
Sbjct: 547 NKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCML 606
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
+ + W L++GY+ +G EA F+ M+ P+ TFV +LSAC AG
Sbjct: 607 KTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAG 666
Query: 514 LVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
L+++GM + SM ++GV P ++H C+VDLLGR G EAE+FI +MP+ + ++W +L
Sbjct: 667 LIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSL 726
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
LS+ N+++G +AA+ + LD SAYV+LSN+YA +W +R + +++
Sbjct: 727 LSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLN 786
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
K P CSW++L + V F + DR++ + IY L+ + L V
Sbjct: 787 KRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREV 830
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 139/635 (21%), Positives = 243/635 (38%), Gaps = 93/635 (14%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G G ++ A+ LF +MP R VVSW ++ S +E+L M + V N +
Sbjct: 90 GSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALA 149
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
T++S+C L + G Q+ V+ SG V + L+ + N +++A+R+FD + E
Sbjct: 150 TVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEER 209
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ M+ Y + S F V M
Sbjct: 210 DRISWNAMISMYSHEEVYSKCFIVLSDM-------------------------------- 237
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
GE P+ T S++ CA G +H L + G + AL+ Y
Sbjct: 238 -RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGK 296
Query: 269 FDGAMRVYDRLE-------NPCLNA---SNSLINGLISMGRIEDAE-------------- 304
D A ++ + N +++ SNS + L ++G++ +
Sbjct: 297 LDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALG 356
Query: 305 ----------------LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
+I R + + NS++ Y+ ++D++R+FE MP ++S
Sbjct: 357 ACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVS 416
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
N + GY A++++ MR I T L C
Sbjct: 417 CNV-----------------LTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTC 459
Query: 409 SCLGSLQQ-GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
LG L G LHA++ +T S+ Y+ SL+ MY+ CG + + FS I++ +V +W
Sbjct: 460 KSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISW 519
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
A++ HG G EA+ LF + LS+ + EGM++
Sbjct: 520 NAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVK 579
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
G+ +D+ G+ G + + + D P W L+S + + E
Sbjct: 580 NGLDCDSHVVNATMDMYGKCGKMDCMLKTLPD-PAHRPTQCWNTLISGYARYGYFKEAED 638
Query: 588 AAQKMFGLDKKP-ISAYVILSNIYAVLGKWGKKMD 621
+ M + +KP +V L + + G K MD
Sbjct: 639 TFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMD 673
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 124/533 (23%), Positives = 220/533 (41%), Gaps = 96/533 (18%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLN---SL 100
MP RT SW T + G ++ + +L+ M +V L+ +++++ C
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
G IH L ++G ++G+ LL Y + + A+R+F E+
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEM--------------- 105
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEY 219
P+++VV WT ++ A S +GC E+AL +R MR+ G M N
Sbjct: 106 ----------------PQRNVVSWTAIM--VALSSNGCMEEALVAYRRMRKEGV-MCNAN 146
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
+V+ C L G V ++ G S+ +LI + A R++DR+
Sbjct: 147 ALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRM 206
Query: 280 ENPCLNASNSLIN----------GLISMGRIEDAELIFNRLTEANSISY----------- 318
E + N++I+ I + + E+ + T + +S
Sbjct: 207 EERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGS 266
Query: 319 ------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
N+++ Y+ G++D+++ LF M R +IS
Sbjct: 267 GIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVIS------------ 314
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQL 419
WN+MIS YVQ+N +AL+ + + S TFS ACS +L G+
Sbjct: 315 -----WNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRT 369
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+HA +++ ++ + +G SL+ MYS+C S+ D + F S+ +V + L GY+
Sbjct: 370 IHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALED 429
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG-LVNEGMKIFRSMKSYGVV 531
+ A+ +F M I PN T + + C G L + GM + + G++
Sbjct: 430 VANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 176/415 (42%), Gaps = 34/415 (8%)
Query: 176 MPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMP-NEYTFDSVIRACA---- 229
MP + W +SG A+ G E A L R MRE ++P + + S++ AC
Sbjct: 1 MPHRTSSSWYTAVSGCARC--GLESTAFTLLRVMRE--RDVPLSGFALASLVTACEHRGW 56
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
+ GA C G +H L + G + IG AL+ Y A R++ + + + +
Sbjct: 57 QEGAAC-GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTA 115
Query: 290 LINGLISMGRIEDAELIFNRL-TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
++ L S G +E+A + + R+ E + N++ ++ G ++D + H +
Sbjct: 116 IMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSG 175
Query: 349 LNTMISVIPEM---------------------ERNPVTWNSMISGYVQNNLHEKALQLYM 387
L T +SV + ER+ ++WN+MIS Y ++ K +
Sbjct: 176 LLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLS 235
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
MR + +T L C+ + G +H+ V + +V + +LV+MYS G
Sbjct: 236 DMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAG 295
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI-VPNAATFVGVL 506
+++A++ F ++S +V +W +++ Y EA+ +L+ D PN+ TF L
Sbjct: 296 KLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSAL 355
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
AC + G I + + L ++ + + + + E + MP
Sbjct: 356 GACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMP 410
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 18/256 (7%)
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
+++ Y G V +++RLF +MP +RN V+W +++ N
Sbjct: 84 ALLHLYGSRGLVLNAQRLFWEMP-----------------QRNVVSWTAIMVALSSNGCM 126
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
E+AL Y MRK + + + + C L G + AH+V + ++V V SL
Sbjct: 127 EEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSL 186
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+ M+ + DA+ F + + +W A+++ YSH + S+ ++ M ++ P+
Sbjct: 187 ITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDV 246
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
T ++S C + LV G I S G+ ++ +V++ +G L EAE ++
Sbjct: 247 TTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRN 306
Query: 560 MPIELDAVVWGALLSA 575
M D + W ++S+
Sbjct: 307 MS-RRDVISWNTMISS 321
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 135/333 (40%), Gaps = 39/333 (11%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
Q L++ N +T + + +F+ MP VVS N + GY+ ++ + S
Sbjct: 380 QNVLLIG-NSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFS 438
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M + +K N T + C L L G +H V ++G E++ + L+ YA C
Sbjct: 439 WMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATC 498
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
++E + +F ++ K V+ W +I+
Sbjct: 499 GDLESSTGIFSRIN-------------------------------NKSVISWNAIIAANV 527
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+ G E+A+KLF + +G + + + + + A L + EG +HGL +K G + D
Sbjct: 528 RHGRG-EEAIKLFMDSQHAGNKL-DRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCD 585
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT- 311
+ A ++ Y C D ++ + N+LI+G G ++AE F +
Sbjct: 586 SHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVS 645
Query: 312 ---EANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ + +++ +++ + G +D + M
Sbjct: 646 VGQKPDYVTFVALLSACSHAGLIDKGMDYYNSM 678
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 13/245 (5%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
M L+A +QT + + I TN IT G L ++ +F ++ ++V+SWN ++
Sbjct: 470 MPLHAYVTQTGLLSDEYI--TNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANV 527
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ + +E++ L + KL+ + LS A L SL +G Q+H L +K+G +C
Sbjct: 528 RHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSH 587
Query: 121 VGSGLLFFYANCFEIE-EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM--- 176
V + + Y C +++ K + D H + W+ ++ GY + +A D F M
Sbjct: 588 VVNATMDMYGKCGKMDCMLKTLPDPAHRPTQ-CWNTLISGYARYGYFKEAEDTFKHMVSV 646
Query: 177 -PKKDVVVWTKLISG--YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
K D V + L+S +A +D K + + M + P ++ RLG
Sbjct: 647 GQKPDYVTFVALLSACSHAGLID---KGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGK 703
Query: 234 FCEGK 238
F E +
Sbjct: 704 FAEAE 708
>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 199/677 (29%), Positives = 314/677 (46%), Gaps = 89/677 (13%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G G L +AR +F +MP+R +VSW++++ + + +E L M +
Sbjct: 145 GELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVL 204
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
T++ C +L L K H +LK G E FV S L+F YA C + A+ VF+ +
Sbjct: 205 TVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYR 264
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ W+ M+ Y NL GY K +AL LF M
Sbjct: 265 STSTWTAMISSY---NL-----------------------GGYLK------EALALFVSM 292
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD-ESIGGALIEFYCGCE 267
+++ E PN T ++R+C L EGK VH ++IK + + + +G L+E Y
Sbjct: 293 QKT-EVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATA 351
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-------------- 313
D ++ + + N+LI+ G +++ +F R+ +
Sbjct: 352 KHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLS 411
Query: 314 ------------------------NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
+ +NS+I Y+ G VD + +F++M + +
Sbjct: 412 ASGNEGELQLGLQIHGHVIKRPFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGV--- 468
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
VTWNSMISG QN KA+ L+ M + F + ACS
Sbjct: 469 --------------VTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACS 514
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
LG L++G+ +H L+ +++ T+LVDMY++CG + AQ F ++S +V +W++
Sbjct: 515 HLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSS 574
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
L++ Y HG SE + LF MLE I PN T + VLSAC AG V EGM F SM+ +G
Sbjct: 575 LISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMRDFG 634
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ P EH+ C+VDLL R+G L EA E IK MP A +WGALL+ C M++ +
Sbjct: 635 IEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQ 694
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
++++ + Y +LSNIYA G+W + ++R + +KK P S +EL + + F
Sbjct: 695 RELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRF 754
Query: 650 SVEDRNNPNCNVIYATL 666
D + P Y+T
Sbjct: 755 GAGDASYPQLKYTYSTF 771
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/580 (23%), Positives = 249/580 (42%), Gaps = 58/580 (10%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
+ + K I + G L ++ ++F W +L + + E++SL M
Sbjct: 34 LPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQ 93
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
++ N TF ++L C+ L G+++H ++KSG++ V + LL Y ++ A
Sbjct: 94 QIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSA 153
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
++VF E MP +D+V W+ +IS ++ +
Sbjct: 154 RKVFGE-------------------------------MPLRDLVSWSSIISSVVENGE-I 181
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+ L FR M G P+ +V+ AC LG K HG ++K G E D + +
Sbjct: 182 NEGLDAFRCMVSEG-GTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSS 240
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEAN 314
LI Y C + A V++ + + ++I+ G +++A +F + E N
Sbjct: 241 LIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPN 300
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI-ISLNTMISVIPEM-------------- 359
S++ +++ + + K + + + +L+ + + E+
Sbjct: 301 SVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKIL 360
Query: 360 ----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
R WN++IS Y Q L ++ + L++ M+K + + A G LQ
Sbjct: 361 HEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQ 420
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G +H H++K PF YV SL++MYS+CG ++ A F + V W ++++G S
Sbjct: 421 LGLQIHGHVIKRPFMDE-YVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLS 479
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
+G ++A+ LF++M FV V+ AC G + +G I + + GV +
Sbjct: 480 QNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIF 539
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
T +VD+ + G L A+ +M E V W +L+S+
Sbjct: 540 IETALVDMYAKCGDLQTAQRVFDNMS-ERSVVSWSSLISS 578
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 212/502 (42%), Gaps = 81/502 (16%)
Query: 128 FYANCFEIEEAKRVFDELHED-------NELLWSLMLV-GYVQCNLMSDAFDVFIKMPKK 179
Y F+ R +LH N+ L S L+ Y Q + + VF
Sbjct: 3 LYMPLFKASTTLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSP 62
Query: 180 DVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
D +W L+ + +GC ++A+ L+ M S + N YTF SV+RAC+ G G+
Sbjct: 63 DSFMWGVLLKSHV--WNGCYQEAISLYHQML-SQQIQANSYTFPSVLRACSGFGDLGVGQ 119
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL----------------ENP 282
VHG +IK GF+ D + AL+ Y D A +V+ + EN
Sbjct: 120 RVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENG 179
Query: 283 CLNASNSLINGLISMGRIEDAEL-----------------------IFNRLTEANSISYN 319
+N ++S G D+ L I R E + +
Sbjct: 180 EINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDS 239
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
S+I YA G + ++ +FE + +RS TW +MIS Y
Sbjct: 240 SLIFMYAKCGSLRSAEIVFENVTYRST-----------------STWTAMISSYNLGGYL 282
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV-YVGTS 438
++AL L+++M+K ++ T ++ +C+ L L++G+ +H ++K ++N+ +G +
Sbjct: 283 KEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPT 342
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+++Y+ + + I +A W L++ Y+ GL E V LF M +Q +P+
Sbjct: 343 LLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPD 402
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV---PTLEHYT--CVVDLLGRSGHLHEA 553
+ + LSA G + G++I +G V P ++ Y ++++ + G++ A
Sbjct: 403 SFSLASSLSASGNEGELQLGLQI------HGHVIKRPFMDEYVFNSLINMYSKCGYVDLA 456
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
M + V W +++S
Sbjct: 457 YMIFDQMEPK-GVVTWNSMISG 477
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 139/324 (42%), Gaps = 17/324 (5%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I + G + A +FDQM + VV+WN+M+ G S+ +++SL M+ + +
Sbjct: 441 NSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPE 500
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ E F +++ C+ L L GK IH ++ G F+ + L+ YA C +++ A+RV
Sbjct: 501 IGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRV 560
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM-----PKKDVVVWTKLISGYAKSVD 196
FD + E + + WS ++ Y +S+ +F KM DV V L A S
Sbjct: 561 FDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVL---SACSHA 617
Query: 197 GCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
GC K + F MR+ G P F ++ +R G E + L+ F SI
Sbjct: 618 GCVKEGMLFFNSMRDFGIE-PKREHFVCIVDLLSRAGDLDEAYEIIKLM---PFPPGASI 673
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
GAL+ GC M + ++ N + I A +N E S
Sbjct: 674 WGALLN---GCRIHQ-RMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRS 729
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFE 339
+ + +K Y V+ K+ +
Sbjct: 730 MMKGTGLKKVPAYSVVELGKKAYR 753
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 196/621 (31%), Positives = 315/621 (50%), Gaps = 73/621 (11%)
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L CA +L GK++H +LK+ + + L+ Y+ C I+ + RVF+
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFN------- 88
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
F K+V + LI+G+ + ++AL L+ MR
Sbjct: 89 ----------------------FPTHHNKNVFAYNALIAGFLANALP-QRALALYNQMRH 125
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVV---HGLLIKCGFEFDESIGGALIEFYCGCE 267
G P+++TF VIRAC G +G VV HGL+ K G E D +G AL+ Y
Sbjct: 126 LGI-APDKFTFPCVIRAC---GDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFR 181
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG--- 324
A RV++ L + N+++NG +GR E+A +F R+ + + G
Sbjct: 182 FVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLS 241
Query: 325 -YAVYGQVDDSKRL---FEKMPHRS-IISLNTMISV------------IPEM--ERNPVT 365
++V G D+ + + KM + S ++ N +I + + EM E + +
Sbjct: 242 IFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFS 301
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACSCLGSLQQGQLLHA 422
WNS++S + + H L+L+ R + R + T + + AC+ L +L G+ +H
Sbjct: 302 WNSIMSVHERCGDHYGTLRLFD--RMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHG 359
Query: 423 HLVKTPFE--------SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
++V +V + +L+DMY++CG++ DA+ F ++ +VA+W ++ GY
Sbjct: 360 YMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGY 419
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPT 533
HG G EA+ +F M + +VPN +FVG+LSAC AG+V EG+ M+S YGV P+
Sbjct: 420 GMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPS 479
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
+EHYTCV+D+L R+G L EA + + MP + D V W +LL+AC + ++ E AA K+
Sbjct: 480 IEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAACRLHNDTDLAEVAASKVI 539
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
L+ YV++SN+Y V+G++ + ++ R + VKK PGCSWIEL + VH F D
Sbjct: 540 ELEPDHCGNYVLMSNVYGVVGRYEEVLEWRYTMKQQNVKKRPGCSWIELVNGVHVFITGD 599
Query: 654 RNNPNCNVIYATLEHLTANLN 674
R +P IYA L LTA L
Sbjct: 600 RTHPQTEYIYAGLNSLTAVLQ 620
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 55/305 (18%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +F+++P+R VV WN M+ G+++ +F+E+L + M + V T + +LS+ +
Sbjct: 186 AYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSV 245
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ +G+ +H V K GYE V + L+ Y C
Sbjct: 246 MGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKC------------------------ 281
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+C + DA VF M + D+ W ++S + + D L+LF M S P
Sbjct: 282 -----KC--VGDALSVFEMMDEIDIFSWNSIMSVHERCGDH-YGTLRLFDRMMGSSRVQP 333
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ T +V+ AC L A G+ +HG ++ G +ES +
Sbjct: 334 DLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEES---------------------H 372
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
D ++ LN N+L++ G + DA ++F + E + S+N MI GY ++G ++
Sbjct: 373 DVFDDVLLN--NALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALD 430
Query: 337 LFEKM 341
+F +M
Sbjct: 431 IFSRM 435
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 10 TLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL 69
T M E+ +V +N I G+ + A ++F+ M + SWN+++ + + +L
Sbjct: 260 TKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTL 319
Query: 70 SLVS-TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
L M S V+ + T +T+L C L +L+ G++IH GY
Sbjct: 320 RLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIH------GY------------M 361
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
N EE+ VFD++ LL + ++ Y +C M DA VF+ M +KDV W +I
Sbjct: 362 VVNGLAKEESHDVFDDV-----LLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMI 416
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+GY G E AL +F M ++ + +PNE +F ++ AC+ G EG
Sbjct: 417 TGYGMHGYGGE-ALDIFSRMCQA-QMVPNEISFVGLLSACSHAGMVKEG 463
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 199/657 (30%), Positives = 314/657 (47%), Gaps = 131/657 (19%)
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA-NCF-EIEEAKRVFDELH 146
T+LS C +L KQIH ++K+G +F S L+ F A + F + A +F+ +
Sbjct: 37 TLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIE 93
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ N+ +W+ M+ G + A D +++M L+ G
Sbjct: 94 QPNQFIWNTMIRGNSLSSSPVGAIDFYVRM----------LLCGVE-------------- 129
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC-- 264
PN YTF ++++CA++GA EGK +HG ++K G E D + +LI Y
Sbjct: 130 ---------PNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQN 180
Query: 265 -------------------------------GCEAFDGAMRVYDRLENPCLNASNSLING 293
GC D A R+++ + + N++I G
Sbjct: 181 GELGYAELVFSKSSLRDAVSFTALITGYTLRGC--LDDARRLFEEIPVRDAVSWNAMIAG 238
Query: 294 LISMGRIEDAELIFNRLTEANSIS------------------------------------ 317
GR E+A F + AN
Sbjct: 239 YAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSN 298
Query: 318 ---YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
N++I Y+ G +D ++ LFE + + IIS WN MI GY
Sbjct: 299 LRLVNALIDMYSKCGDLDKARDLFEGICEKDIIS-----------------WNVMIGGYS 341
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE-SNV 433
N +++AL L+ M++ ++ TF + AC+ LG+L G+ +HA++ K +N
Sbjct: 342 HMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNT 401
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+ TSL+DMY++CG+I A+ F+ + ++ +W A+++G + HG + A+ LF M ++
Sbjct: 402 SLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDE 461
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHE 552
P+ TFVGVLSAC AGLV G + F SM + Y + P L+HY C++DLLGR+G E
Sbjct: 462 GFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDE 521
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
AE +K+M ++ D +WG+LL AC N+E+GE AA+ +F L+ + AYV+LSNIYA
Sbjct: 522 AEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYAT 581
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
G+W IR +L +KK PGCS IE++S VH F V D+ + IY L+ +
Sbjct: 582 AGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEI 638
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 149/586 (25%), Positives = 257/586 (43%), Gaps = 58/586 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A LF+ + WNTM+ G S + ++ M V+ N TF +L
Sbjct: 80 GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLL 139
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
CA++ + +GKQIH VLK G E FV + L+ YA E+ A+ VF + + +
Sbjct: 140 KSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAV 199
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
++ ++ GY + DA +F ++P +D V W +I+GYA+S E+AL F+ M+ +
Sbjct: 200 SFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQS-GRFEEALAFFQEMKRA 258
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
PNE T +V+ ACA+ G+ G V + G + + ALI+ Y C D
Sbjct: 259 NV-APNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDK 317
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAV 327
A +++ + + + N +I G M ++A +F ++ E N +++ S++ A
Sbjct: 318 ARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAY 377
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMI------------------SVIPEMERNPV-TWNS 368
G +D K + + + + NT + V M+ + +WN+
Sbjct: 378 LGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNA 437
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT- 427
MISG + AL+L+ MR + TF + ACS G ++ G+ + +V+
Sbjct: 438 MISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDY 497
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGS-E 482
+ ++D+ R G ++A+A ++ P+ A W +L+ HG LG
Sbjct: 498 DISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFA 557
Query: 483 AVLLFEI--------MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
A LFE+ +L +I A + V A +R L ++GMK S V +
Sbjct: 558 AKHLFELEPENPGAYVLLSNIYATAGRWDDV--ARIRTKLNDKGMKKVPGCSSIEVDSVV 615
Query: 535 EHYTC-----------------VVDLLGRSGHLHEAEEFIKDMPIE 563
+ + LL ++GH+ + E + DM E
Sbjct: 616 HEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEE 661
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 202/439 (46%), Gaps = 56/439 (12%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS IT G L AR LF+++P+R VSWN M+ GY++ +F+E+L+ M R+
Sbjct: 199 VSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRA 258
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
NV NE+T T+LS CAQ SL G + + G + + L+ Y+ C ++++A
Sbjct: 259 NVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKA 318
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +F+ + E + + W++M+ GY N +A +F KM + +V
Sbjct: 319 RDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNV----------------- 361
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF-DESIGG 257
PN+ TF S++ ACA LGA GK +H + K + S+
Sbjct: 362 ----------------EPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWT 405
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EA 313
+LI+ Y C + A +V+ ++ L + N++I+GL G A +F ++ E
Sbjct: 406 SLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEP 465
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
+ I++ ++ + G V+ ++ F M IS P+++ + MI
Sbjct: 466 DDITFVGVLSACSHAGLVELGRQCFSSMVEDYDIS--------PKLQH----YGCMIDLL 513
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESN 432
+ L ++A L M+ + + + + L AC G+++ G+ HL + P
Sbjct: 514 GRAGLFDEAEAL---MKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPG 570
Query: 433 VYVGTSLVDMYSRCGSIND 451
YV L ++Y+ G +D
Sbjct: 571 AYV--LLSNIYATAGRWDD 587
>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
Length = 591
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 190/603 (31%), Positives = 299/603 (49%), Gaps = 52/603 (8%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
LN FS +L+ C + L G +H V+K+ + C + V
Sbjct: 9 LNYARFSGLLASCGREGDLRLGAALHAAVVKNPAH------------FRLCASRPWLRHV 56
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
+ W+ ++ Y +C DA VF +M +D V W LI+ + G A
Sbjct: 57 L--------VAWNALVSMYARCGRREDAARVFDEMRVRDAVSWNSLIA----ASRGAGDA 104
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGA--FCEGKVVHGLLIKCGFEFDESIGGAL 259
L LFR M S + TF +V+ CAR GA +VHGL++ CGFE + +G AL
Sbjct: 105 LALFRRMLRSDARACDRATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNAL 164
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN---RLTEANSI 316
+ Y C + A RV+ + + ++I+G+ +++ +F R +AN+
Sbjct: 165 VTAYFECGSPASAERVFHGMAEKNVITWTAMISGMARAELYKESFSLFGQMIRTVDANNA 224
Query: 317 SYNSMI----------KGYAVYGQVDDSKRLFEKMPH--RSIISLNTMISVIPEM----- 359
+Y+ + +G V+G V K FE H ++ + + ++ +
Sbjct: 225 TYSCTLLACARSLAAREGQQVHGLV--VKAGFEADLHVESGLMDVYSKCGLMEDALTVFR 282
Query: 360 ---ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
E + V ++ G+ QN L EKA +L+ M + +T S + A
Sbjct: 283 SCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFAL 342
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +HA ++K F N YV LV+MYS+CG + ++ F + S N +W +++ ++
Sbjct: 343 GKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFAR 402
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLE 535
HG GSE LFE M P TF+ +L AC G +G++I SM S YGV+P +E
Sbjct: 403 HGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRME 462
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
HY CVVD+LGR+G L +A+ FI+D P A++W AL+ AC F N EVG+ AA+K+ L
Sbjct: 463 HYACVVDMLGRAGLLDDAKSFIEDGPFTDSALLWQALMGACSFHGNSEVGKHAAEKLLLL 522
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN 655
D +AYV+LSNIY+ G+W + + KR++ + ++KD G SWIEL VH+F V +
Sbjct: 523 DPSCTAAYVLLSNIYSSEGRWDDRAKVMKRMSEMGLRKDTGKSWIELEKEVHSFVVRSTS 582
Query: 656 NPN 658
+PN
Sbjct: 583 HPN 585
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 222/507 (43%), Gaps = 100/507 (19%)
Query: 17 LIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
++V+ N ++ R G+ A +FD+M +R VSWN+++ S+ A ++L+L M
Sbjct: 56 VLVAWNALVSMYARCGRREDAARVFDEMRVRDAVSWNSLIAA-SRGA--GDALALFRRML 112
Query: 77 RSNVKL-NETTFSTILSVCAQLN--SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
RS+ + + TF+T+LS CA+ SL +H LV+ G+E VG+ L+ Y C
Sbjct: 113 RSDARACDRATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECG 172
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
A+RVF + E N + W+ M+ G + L ++F +F +M +
Sbjct: 173 SPASAERVFHGMAEKNVITWTAMISGMARAELYKESFSLFGQM---------------IR 217
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+VD N T+ + ACAR A EG+ VHGL++K GFE D
Sbjct: 218 TVDA-------------------NNATYSCTLLACARSLAAREGQQVHGLVVKAGFEADL 258
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENP---------------------------CLNA 286
+ L++ Y C + A+ V+ P + A
Sbjct: 259 HVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGA 318
Query: 287 SNSLINGLIS-------------MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
N + +S +G+ A L+ R N+ N ++ Y+ G++ +
Sbjct: 319 GNEIDENTVSTVLGAFGASAPFALGKQIHA-LVIKRCFGVNTYVCNGLVNMYSKCGELRE 377
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
S ++F++MP +N V+WNS+I+ + ++ + QL+ +M+
Sbjct: 378 SVQVFDEMP-----------------SKNSVSWNSIIAAFARHGHGSEVYQLFESMKADG 420
Query: 394 IDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
T TF L HACS +GS ++G ++L++ + + +VDM R G ++DA
Sbjct: 421 AKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDA 480
Query: 453 QASFSSISSPNVA-AWTALMNGYSHHG 478
++ + A W ALM S HG
Sbjct: 481 KSFIEDGPFTDSALLWQALMGACSFHG 507
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 9/266 (3%)
Query: 53 NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
+L G+++ +++ L + M + +++E T ST+L GKQIH LV+K
Sbjct: 293 TVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIK 352
Query: 113 SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
+ +V +GL+ Y+ C E+ E+ +VFDE+ N + W+ ++ + + S+ + +
Sbjct: 353 RCFGVNTYVCNGLVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQL 412
Query: 173 FIKM----PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
F M K V + L+ + V +K L++ M +P + V+
Sbjct: 413 FESMKADGAKPTDVTFLSLLHACSH-VGSAKKGLEILNSMSSQYGVLPRMEHYACVVDML 471
Query: 229 ARLGAFCEGK--VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
R G + K + G + +G F+ E A L+ C A
Sbjct: 472 GRAGLLDDAKSFIEDGPFTDSALLWQALMGA--CSFHGNSEVGKHAAEKLLLLDPSCTAA 529
Query: 287 SNSLINGLISMGRIEDAELIFNRLTE 312
L N S GR +D + R++E
Sbjct: 530 YVLLSNIYSSEGRWDDRAKVMKRMSE 555
>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 199/677 (29%), Positives = 314/677 (46%), Gaps = 89/677 (13%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G G L +AR +F +MP+R +VSW++++ + + +E L M +
Sbjct: 145 GELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVL 204
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
T++ C +L L K H +LK G E FV S L+F YA C + A+ VF+ +
Sbjct: 205 TVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYR 264
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ W+ M+ Y NL GY K +AL LF M
Sbjct: 265 STSTWTAMISSY---NL-----------------------GGYLK------EALALFVSM 292
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD-ESIGGALIEFYCGCE 267
+++ E PN T ++R+C L EGK VH ++IK + + + +G L+E Y
Sbjct: 293 QKT-EVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATA 351
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-------------- 313
D ++ + + N+LI+ G +++ +F R+ +
Sbjct: 352 KHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLS 411
Query: 314 ------------------------NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
+ +NS+I Y+ G VD + +F++M + +
Sbjct: 412 ASGNEGELQLGLQIHGHVIKRPFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGV--- 468
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
VTWNSMISG QN KA+ L+ M + F + ACS
Sbjct: 469 --------------VTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACS 514
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
LG L++G+ +H L+ +++ T+LVDMY++CG + AQ F ++S +V +W++
Sbjct: 515 HLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSS 574
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
L++ Y HG SE + LF MLE I PN T + VLSAC AG V EGM F SM+ +G
Sbjct: 575 LISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMRDFG 634
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ P EH+ C+VDLL R+G L EA E IK MP A +WGALL+ C M++ +
Sbjct: 635 IEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQ 694
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
++++ + Y +LSNIYA G+W + ++R + +KK P S +EL + + F
Sbjct: 695 RELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRF 754
Query: 650 SVEDRNNPNCNVIYATL 666
D + P Y+T
Sbjct: 755 GAGDASYPQLKYTYSTF 771
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/580 (23%), Positives = 249/580 (42%), Gaps = 58/580 (10%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
+ + K I + G L ++ ++F W +L + + E++SL M
Sbjct: 34 LPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQ 93
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
++ N TF ++L C+ L G+++H ++KSG++ V + LL Y ++ A
Sbjct: 94 QIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSA 153
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
++VF E MP +D+V W+ +IS ++ +
Sbjct: 154 RKVFGE-------------------------------MPLRDLVSWSSIISSVVENGE-I 181
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+ L FR M G P+ +V+ AC LG K HG ++K G E D + +
Sbjct: 182 NEGLDAFRCMVSEG-GTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSS 240
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEAN 314
LI Y C + A V++ + + ++I+ G +++A +F + E N
Sbjct: 241 LIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPN 300
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI-ISLNTMISVIPEM-------------- 359
S++ +++ + + K + + + +L+ + + E+
Sbjct: 301 SVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKIL 360
Query: 360 ----ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
R WN++IS Y Q L ++ + L++ M+K + + A G LQ
Sbjct: 361 HEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQ 420
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G +H H++K PF YV SL++MYS+CG ++ A F + V W ++++G S
Sbjct: 421 LGLQIHGHVIKRPFMDE-YVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLS 479
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
+G ++A+ LF++M FV V+ AC G + +G I + + GV +
Sbjct: 480 QNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIF 539
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
T +VD+ + G L A+ +M E V W +L+S+
Sbjct: 540 IETALVDMYAKCGDLQTAQRVFDNMS-ERSVVSWSSLISS 578
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 212/502 (42%), Gaps = 81/502 (16%)
Query: 128 FYANCFEIEEAKRVFDELHED-------NELLWSLMLV-GYVQCNLMSDAFDVFIKMPKK 179
Y F+ R +LH N+ L S L+ Y Q + + VF
Sbjct: 3 LYMPLFKASTTLRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSP 62
Query: 180 DVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
D +W L+ + +GC ++A+ L+ M S + N YTF SV+RAC+ G G+
Sbjct: 63 DSFMWGVLLKSHV--WNGCYQEAISLYHQML-SQQIQANSYTFPSVLRACSGFGDLGVGQ 119
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL----------------ENP 282
VHG +IK GF+ D + AL+ Y D A +V+ + EN
Sbjct: 120 RVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENG 179
Query: 283 CLNASNSLINGLISMGRIEDAEL-----------------------IFNRLTEANSISYN 319
+N ++S G D+ L I R E + +
Sbjct: 180 EINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDS 239
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
S+I YA G + ++ +FE + +RS TW +MIS Y
Sbjct: 240 SLIFMYAKCGSLRSAEIVFENVTYRST-----------------STWTAMISSYNLGGYL 282
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV-YVGTS 438
++AL L+++M+K ++ T ++ +C+ L L++G+ +H ++K ++N+ +G +
Sbjct: 283 KEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPT 342
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+++Y+ + + I +A W L++ Y+ GL E V LF M +Q +P+
Sbjct: 343 LLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPD 402
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV---PTLEHYT--CVVDLLGRSGHLHEA 553
+ + LSA G + G++I +G V P ++ Y ++++ + G++ A
Sbjct: 403 SFSLASSLSASGNEGELQLGLQI------HGHVIKRPFMDEYVFNSLINMYSKCGYVDLA 456
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
M + V W +++S
Sbjct: 457 YMIFDQMEPK-GVVTWNSMISG 477
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 139/324 (42%), Gaps = 17/324 (5%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I + G + A +FDQM + VV+WN+M+ G S+ +++SL M+ + +
Sbjct: 441 NSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPE 500
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ E F +++ C+ L L GK IH ++ G F+ + L+ YA C +++ A+RV
Sbjct: 501 IGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRV 560
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM-----PKKDVVVWTKLISGYAKSVD 196
FD + E + + WS ++ Y +S+ +F KM DV V L A S
Sbjct: 561 FDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVL---SACSHA 617
Query: 197 GCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
GC K + F MR+ G P F ++ +R G E + L+ F SI
Sbjct: 618 GCVKEGMLFFNSMRDFGIE-PKREHFVCIVDLLSRAGDLDEAYEIIKLM---PFPPGASI 673
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
GAL+ GC M + ++ N + I A +N E S
Sbjct: 674 WGALLN---GCRIHQ-RMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRS 729
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFE 339
+ + +K Y V+ K+ +
Sbjct: 730 MMKGTGLKKVPAYSVVELGKKAYR 753
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 195/702 (27%), Positives = 337/702 (48%), Gaps = 102/702 (14%)
Query: 22 NKAITECGRNGQLVTARNLFDQMP---IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
N I+ ++G A ++F+ M R VVSW+ M+ Y + +++ +
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL 160
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG-YECFEFVGSGLL-FFYANCFEIE 136
+ N+ ++ ++ C+ + + G+ ++K+G +E VG L+ F E
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A +VFD++ E N + W+LM+ +Q +A F+ M ++SG+
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM----------VLSGFES--- 267
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
+++T SV ACA L GK +H I+ G D +
Sbjct: 268 --------------------DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VE 305
Query: 257 GALIEFYCGCEA---FDGAMRVYDRLENPCLNASNSLING-----------------LIS 296
+L++ Y C A D +V+DR+E+ + + +LI G +I+
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 297 MGRIEDAELIFN------------------------RLTEANSISYNSMIKGYAVYGQVD 332
G +E F+ R +NS NS+I + +++
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
D++R FE + E+N V++N+ + G +N E+A +L + +
Sbjct: 426 DAQRAFESLS-----------------EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ + TF+ L + +GS+++G+ +H+ +VK N V +L+ MYS+CGSI+ A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
F+ + + NV +WT+++ G++ HG + F M+E+ + PN T+V +LSAC
Sbjct: 529 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588
Query: 513 GLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GLV+EG + F SM + + + P +EHY C+VDLL R+G L +A EFI MP + D +VW
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
L AC N E+G+ AA+K+ LD +AY+ LSNIYA GKW + ++R+++ +
Sbjct: 649 FLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
K+ GCSWIE+ ++H F V D +PN + IY L+ L +
Sbjct: 709 VKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 33/217 (15%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N I+ ++ ++ A+ F+ + + +VS+NT L G + F+++ L+S + +
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
++ TF+++LS A + S+ G+QIH V+K G C + V + L+ Y+ C I+ A R
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASR 530
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF+ + N + W+ M+ G+ + G+A V
Sbjct: 531 VFNFMENRNVISWTSMITGFAK--------------------------HGFAIRV----- 559
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
L+ F M E G PNE T+ +++ AC+ +G EG
Sbjct: 560 -LETFNQMIEEGVK-PNEVTYVAILSACSHVGLVSEG 594
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 129/285 (45%), Gaps = 25/285 (8%)
Query: 297 MGRIEDAELI-FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
+G++ A LI F+ E +S+ YNS+I Y+ G ++ +FE M
Sbjct: 80 LGKLVHARLIEFD--IEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG---------- 127
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
+R+ V+W++M++ Y N A+++++ +L + ++ + ACS +
Sbjct: 128 ----KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 416 QGQLLHAHLVKTP-FESNVYVGTSLVDMYSRC-GSINDAQASFSSISSPNVAAWTALMNG 473
G++ L+KT FES+V VG SL+DM+ + S +A F +S NV WT ++
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT 533
G EA+ F M+ + T V SAC ++ G ++ G+V
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Query: 534 LEHYTCVVDLLGR---SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+E +VD+ + G + + + M + + W AL++
Sbjct: 304 VE--CSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITG 345
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 16/202 (7%)
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
TFS L +C + G+L+HA L++ E + + SL+ +YS+ G A+ F ++
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 460 ---SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+V +W+A+M Y ++G +A+ +F LE +VPN + V+ AC + V
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
G + G E CV +D+ + + E + D EL+ V W +
Sbjct: 184 VGRVTLGFLMKTG---HFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 573 LSACWFWMNMEVG-ERAAQKMF 593
++ C M++G R A + F
Sbjct: 241 ITRC-----MQMGFPREAIRFF 257
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 298/556 (53%), Gaps = 62/556 (11%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
A VF + + ++++W + G+A S D ALKL+ M G +P+ YTF ++++C
Sbjct: 42 AISVFDTIQEPNLLIWNTMFRGHALSSDPVS-ALKLYLVMISLGL-LPDSYTFPFLLKSC 99
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A+ EG+ +HG ++K GF+ D + +LI Y + A +V+D + + +
Sbjct: 100 AKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYT 159
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
+LI G +S G IE A+ +F+ + + +S+N+MI GY G ++ LF++M + +
Sbjct: 160 ALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVR 219
Query: 349 LN--TMISVIP-----------------------------------------EME----- 360
+ TM++V+ E+E
Sbjct: 220 PDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACEL 279
Query: 361 ------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
++ ++WN++I GY NL+++AL L+ M + T + AC+ LG++
Sbjct: 280 FDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 339
Query: 415 QQGQLLHAHLVKT--PFESNVY-VGTSLVDMYSRCGSINDAQASF-SSISSPNVAAWTAL 470
G+ +H ++ K +NV + TSL+DMY++CG I+ AQ F SS+S+ +++ W A+
Sbjct: 340 DIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAM 399
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYG 529
++G++ HG + A +F M I P+ TFVG+LSAC +G+++ G IFRSM + Y
Sbjct: 400 ISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYE 459
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ P LEHY C++DLLG SG EAEE I MP+E D V+W +LL AC N+E+GE A
Sbjct: 460 ITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFA 519
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD-PGCSWIELNSRVHA 648
+K+ ++ +YV+LSNIYA G+W + IR L +KK PGCS IE++S VH
Sbjct: 520 KKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHE 579
Query: 649 FSVEDRNNPNCNVIYA 664
F + D+ +P IY
Sbjct: 580 FIIGDKLHPQNREIYG 595
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 221/473 (46%), Gaps = 35/473 (7%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A ++FD + ++ WNTM G++ + +L L M + + TF +L CA+
Sbjct: 42 AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+G+QIH VLK G++ +V + L+ YA +E+A++VFD + + ++ +
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ GYV + A +F ++P KDVV W +ISGY ++ + ++AL+LF+ M P
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGN-YKEALELFKEMMMMTNVRP 220
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+E T +V+ ACA+ + G+ VH + GF + I ALI+ Y + A ++
Sbjct: 221 DESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELF 280
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVD 332
D L N + + N+LI G M ++A L+F + + N ++ S++ A G +D
Sbjct: 281 DGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 340
Query: 333 DSKRL---FEKMPHRSIISLNTMISVIPEM-------------------ERNPVTWNSMI 370
+ + K + +++++ + + +M R+ TWN+MI
Sbjct: 341 IGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMI 400
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK---- 426
SG+ + A ++ MR I+ TF L ACS G L G+ + + +
Sbjct: 401 SGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEI 460
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
TP + ++D+ G +A+ +++ P+ W +L+ HG
Sbjct: 461 TPKLEHY---GCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG 510
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 204/444 (45%), Gaps = 60/444 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS-TMH 76
+VS I G + +A+ LFD++P + VVSWN M+ GY + + E+L L M
Sbjct: 155 VVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMM 214
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+NV+ +E+T T++S CAQ +S+ G+ +H + G+ + + L+ Y+ E+E
Sbjct: 215 MTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVE 274
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A +FD L + + W+ ++ GY NL
Sbjct: 275 TACELFDGLWNKDVISWNTLIGGYTHMNLY------------------------------ 304
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL---IKCGFEFDE 253
++AL LF+ M SGE PN+ T S++ ACA LGA G+ +H + +K
Sbjct: 305 --KEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVS 361
Query: 254 SIGGALIEFYCGCEAFDGAMRVYD-RLENPCLNASNSLINGLISMGRIEDAELIFNRL-- 310
S+ +LI+ Y C D A +V+D + N L+ N++I+G GR A IF+R+
Sbjct: 362 SLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRM 421
Query: 311 --TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
E + I++ ++ + G +D + +F S+ + P++E +
Sbjct: 422 NGIEPDDITFVGLLSACSHSGMLDLGRNIFR--------SMTRGYEITPKLEH----YGC 469
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT- 427
MI + L ++A ++ TM ++ + L AC G+L+ G+ L+K
Sbjct: 470 MIDLLGHSGLFKEAEEMINTM---PMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIE 526
Query: 428 PFESNVYVGTSLVDMYSRCGSIND 451
P S YV L ++Y+ G N+
Sbjct: 527 PGNSGSYV--LLSNIYAAAGRWNE 548
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 122/266 (45%), Gaps = 21/266 (7%)
Query: 418 QLLHAHLVKTPFESNVYVGTSLVD---MYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
+ +HA ++KT + Y + L++ + A + F +I PN+ W + G+
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
+ A+ L+ +M+ ++P++ TF +L +C ++ + EG +I + G +
Sbjct: 65 ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
+T ++ + ++G L +A + + D+ D V + AL++ +E +AQK+F
Sbjct: 125 YVHTSLISMYAQNGRLEDARK-VFDISSHRDVVSYTALIAGYVSRGYIE----SAQKLFD 179
Query: 595 -LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL-EVKKD--------PGCSW---IE 641
+ K + ++ + + Y G + + +++ K + + V+ D C+ IE
Sbjct: 180 EIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIE 239
Query: 642 LNSRVHAFSVEDRNNPNCNVIYATLE 667
L VH++ + N ++ A ++
Sbjct: 240 LGRHVHSWINDHGFASNLKIVNALID 265
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 278/548 (50%), Gaps = 68/548 (12%)
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
K +V W +I+ A+ D E AL+ F +R+ G +P +F I++C+ L G
Sbjct: 1104 KSNVHSWNSVIADLARGGDSVE-ALRAFSSLRKLGL-IPTRSSFPCTIKSCSALCDLVSG 1161
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
++ H GFE D + ALI+ Y C A ++D + + + S+I G +
Sbjct: 1162 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 1221
Query: 298 GRIEDAELIFNRLTE-------ANSISY-------------------------------- 318
+ ++A L+F E N++
Sbjct: 1222 EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKG 1281
Query: 319 --------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
N+++ YA GQ SK++F+ M E++ ++WNSMI
Sbjct: 1282 FDGSIGVGNTLMDAYAKCGQPLVSKKVFDWME-----------------EKDDISWNSMI 1324
Query: 371 SGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ Y Q+ L +AL+++ M R + + T S + AC+ G+L+ G+ +H ++K
Sbjct: 1325 AVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDL 1384
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
E NV VGTS++DMY +CG + A+ +F + NV +WTA++ GY HG EA+ +F
Sbjct: 1385 EYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYK 1444
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSG 548
M+ + PN TFV VL+AC AGLV EG F +MK Y + P +EHY C+VDL GR+G
Sbjct: 1445 MVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAG 1504
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L+EA IK M ++ D VVWG+LL AC N+++GE AAQK+F LD YV+LSN
Sbjct: 1505 CLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSN 1564
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YA G+W +R + + ++ K PG S +EL RVH F V D+ +P+ +IY LE
Sbjct: 1565 LYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEK 1624
Query: 669 LTANLNSV 676
LT L +
Sbjct: 1625 LTLELQKI 1632
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 230/486 (47%), Gaps = 89/486 (18%)
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R N++ + F +L C L +QIH +++SG + + L+ Y+ I
Sbjct: 22 RGNIRAKKALF--LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIA 76
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A +F ++ W+L++ A +++
Sbjct: 77 YAILLFYQIQNPCTFTWNLII---------------------------------RANTIN 103
Query: 197 G-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
G E+AL L++ M G +++TF VI+AC + GKVVHG LIK GF D +
Sbjct: 104 GLSEQALMLYKNMVCQGI-AADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
LI+FY C A++V++++ R+ N
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKM-------------------RVR------------NV 191
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
+S+ ++I G G + +++R+F+++P ++++S W +MI+GY++
Sbjct: 192 VSWTTVISGLISCGDLQEARRIFDEIPSKNVVS-----------------WTAMINGYIR 234
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
N E+AL+L+ M+ I T L AC+ +G L G+ +H + +K E VY+
Sbjct: 235 NQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYL 294
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
GT+L+DMYS+CGSI DA F ++ ++ W +++ HGLG EA+ LF M ++
Sbjct: 295 GTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNV 354
Query: 496 VPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
P+A TF+GVL ACV V EG F M + YG+ P EHY C+ +L RS +L EA
Sbjct: 355 KPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414
Query: 555 EFIKDM 560
+ K++
Sbjct: 415 KSTKEV 420
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 177/388 (45%), Gaps = 64/388 (16%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
ET + ++ I + GQL AR LFD++P+R VVSW +M+ GY + + D +L L
Sbjct: 1174 ETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKD 1233
Query: 75 M--------HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
+NV L+ ++LS C++++ + +H V+K G++ VG+ L+
Sbjct: 1234 FLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLM 1293
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
YA C + +K+VFD + E +++ W+ M+ Y Q L +A +VF M + V +
Sbjct: 1294 DAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRY-- 1351
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
N T +V+ ACA GA GK +H +IK
Sbjct: 1352 ------------------------------NAVTLSAVLLACAHAGALRAGKCIHDQVIK 1381
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
E++ +G ++I+ YC C + A + +DR++ + + +++ G GR ++A I
Sbjct: 1382 MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDI 1441
Query: 307 FNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS-------------- 348
F ++ A N I++ S++ + G V++ F M H+ I
Sbjct: 1442 FYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFG 1501
Query: 349 ----LNTMISVIPEMERNP--VTWNSMI 370
LN ++I M+ P V W S++
Sbjct: 1502 RAGCLNEAYNLIKRMKMKPDFVVWGSLL 1529
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 151/295 (51%), Gaps = 4/295 (1%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
T K I +G++ A LF Q+ +WN ++ + +++L L M +
Sbjct: 62 TRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGI 121
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
++ TF ++ C S+ GK +H ++K G+ FV + L+ FY C A +
Sbjct: 122 AADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALK 181
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF+++ N + W+ ++ G + C + +A +F ++P K+VV WT +I+GY ++ E+
Sbjct: 182 VFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQP-EE 240
Query: 201 ALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
AL+LF+ M+ EN+ PNEYT S+I+AC +G G+ +H IK E +G AL
Sbjct: 241 ALELFKRMQ--AENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTAL 298
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
I+ Y C + A+ V++ + L NS+I L G ++A +F+ + N
Sbjct: 299 IDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVN 353
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 41/238 (17%)
Query: 361 RNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+NP TWN +I N L E+AL LY M I + TF + AC+ S+ G+
Sbjct: 86 QNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGK 145
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCG------------------------------- 447
++H L+K F +V+V +L+D Y +CG
Sbjct: 146 VVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCG 205
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
+ +A+ F I S NV +WTA++NGY + EA+ LF+ M ++I PN T V ++
Sbjct: 206 DLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIK 265
Query: 508 ACVRAGLVNEGMKIFRSMKSYGVVPTLE----HYTCVVDLLGRSGHLHEAEEFIKDMP 561
AC G++ G R + Y + +E T ++D+ + G + +A E + MP
Sbjct: 266 ACTEMGILTLG----RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS I+ G L AR +FD++P + VVSW M+ GY + + +E+L L M
Sbjct: 191 VVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQA 250
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
N+ NE T +++ C ++ L G+ IH +K+ E ++G+ L+ Y+ C I++
Sbjct: 251 ENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKD 310
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
A VF+ + + W+ M+ L +A ++F +M + +V
Sbjct: 311 AIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNV 354
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 4/172 (2%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
L C L+Q +HA ++++ ++ + L+ +YS G I A F I +P
Sbjct: 33 LLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
W ++ + +GL +A++L++ M+ Q I + TF V+ AC ++ G +
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 524 SMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
S+ YG + ++D + GH A + + M + + V W ++S
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISG 200
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A +F+ MP +++ +WN+M+ E+L+L S M R NVK + TF +L
Sbjct: 306 GSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365
Query: 92 SVCAQLNSLIDG 103
C + ++ +G
Sbjct: 366 CACVHIKNVKEG 377
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 190/672 (28%), Positives = 323/672 (48%), Gaps = 59/672 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
GQL AR +FD++P ++N ++ YS F ++ L +M V N+ TF +L
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ L L G+ IH G FV + L+ Y C A VF ++ + +
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ML GY + A A +D M++
Sbjct: 167 AWNAMLAGYANHGMYHHAI---------------------AHLLD-----------MQDR 194
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES---IGGALIEFYCGCEA 268
G PN T S++ A+ GA +G VH ++ + +E IG AL++ Y C+
Sbjct: 195 GGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKH 254
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF-NRLTEANS-ISYNSMIKGYA 326
A RV+ + ++LI G + R+ +A +F + L E +S S+
Sbjct: 255 LVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALR 314
Query: 327 VYGQVDDSKR-------LFEKMPHRSIISLNTMISVIPEME--------------RNPVT 365
V + D + L + H + + N+++S+ + ++ ++
Sbjct: 315 VCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTIS 374
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
+ +++SGYVQN E+A ++ M+ + +T L ACS L +LQ G+ H ++
Sbjct: 375 YGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVI 434
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ SL+DMY++CG I+ ++ F + + ++ +W ++ GY HGLG EA
Sbjct: 435 IRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATT 494
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
LF M Q P+ TF+ +++AC +GLV EG F +M YG++P +EHY C+VDLL
Sbjct: 495 LFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLL 554
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
R G L EA +FI+ MP++ D VWGALL AC N+++G++ ++ + L + +V
Sbjct: 555 ARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFV 614
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+LSNI++ G++ + ++R KK PGCSWIE+N +HAF D+++P IY
Sbjct: 615 LLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYH 674
Query: 665 TLEHLTANLNSV 676
L+++ ++ +
Sbjct: 675 ELDNILIDIKKL 686
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 5 ATQSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
TQ L+ + + + + N ++ + G + A LFD++ I+ +S+ +L GY +
Sbjct: 325 GTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQ 384
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
K +E+ + M NV+ + T +++ C+ L +L G+ H V+ G +
Sbjct: 385 NGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSI 444
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+ L+ YA C I+ +++VFD++ + + W+ M+ GY
Sbjct: 445 CNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYG-------------------- 484
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
I G K +A LF M+ G P++ TF +I AC+ G EGK
Sbjct: 485 ------IHGLGK------EATTLFLSMKNQGFE-PDDVTFICLIAACSHSGLVTEGK 528
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 264/517 (51%), Gaps = 66/517 (12%)
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+AL L+ M G+ PN +TF +++CA L G HG + K G F+ + L
Sbjct: 23 QALSLYPQMLRHGDR-PNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGL 81
Query: 260 IEFYCGCEAFDGAMRVYD-----RLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-- 312
I YC D A +V++ R C NA L++G +S + DA L+F ++ E
Sbjct: 82 ISMYCKGSLVDNARKVFEENFHSRKLTVCYNA---LVSGYVSNSKCSDAVLLFRQMNEEG 138
Query: 313 --ANSISY-----------------------------------NSMIKGYAVYGQVDDSK 335
NS++ N I Y G V+ ++
Sbjct: 139 VPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQ 198
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
+LF++MP + +IS WN+M+SGY QN L L+LY M +
Sbjct: 199 KLFDEMPVKGLIS-----------------WNAMVSGYAQNGLATNVLELYRNMDMNGVH 241
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
T + +C+ LG+ G + + + F SN ++ +L++MY+RCG++ AQA
Sbjct: 242 PDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAV 301
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F + + +WTA++ GY HG G AV LF+ M+ I P+ FV VLSAC AGL
Sbjct: 302 FDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLT 361
Query: 516 NEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
++G++ F+ MK +Y + P EHY+C+VDLLGR+G L EA+ I+ MPI+ D VWGALL
Sbjct: 362 DQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 421
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
AC N+E+ E A +++ L+ + I YV+LSNIY+ + IR + ++KKD
Sbjct: 422 ACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKD 481
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
PGCS++EL RVH F V DRN+ + IY LE L A
Sbjct: 482 PGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEA 518
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 193/483 (39%), Gaps = 91/483 (18%)
Query: 52 WNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL 111
WNT L +K +F ++LSL M R + N TF L CA L+ I G Q H +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
K G FV +GL+ Y ++ A++VF+E N S
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEE-------------------NFHS---- 104
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
+K V + L+SGY S C A+ LFR M E G + N T +I AC
Sbjct: 105 ------RKLTVCYNALVSGYV-SNSKCSDAVLLFRQMNEEGVPV-NSVTLLGLIPACVSP 156
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
G +H +K GF+ D S+ I Y C + + A +++D + L + N+++
Sbjct: 157 INLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMV 216
Query: 292 NGLISMGRIEDAELIFNRLT---------------------------------------E 312
+G G + ++ +
Sbjct: 217 SGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFT 276
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
+N N++I YA G + ++ +F+ MP R+++S W ++I G
Sbjct: 277 SNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVS-----------------WTAIIGG 319
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--E 430
Y + E A+QL+ M + I+ + F + ACS G QG L + ++K + E
Sbjct: 320 YGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQG-LEYFKMMKRNYQLE 378
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ +VD+ R G + +AQ S+ P+ A W AL+ H A L FE
Sbjct: 379 PGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFER 438
Query: 490 MLE 492
++E
Sbjct: 439 VIE 441
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 188/469 (40%), Gaps = 88/469 (18%)
Query: 32 GQLV-TARNLFDQ--MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G LV AR +F++ + V +N ++ GY +K +++ L M+ V +N T
Sbjct: 88 GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLL 147
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++ C +L G +HC LK G++ V + + Y C + A+++FDE
Sbjct: 148 GLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDE---- 203
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
MP K ++ W ++SGYA++ L+L+R M
Sbjct: 204 ---------------------------MPVKGLISWNAMVSGYAQN-GLATNVLELYRNM 235
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+G + P+ T V+ +CA LGA G V + GF + + ALI Y C
Sbjct: 236 DMNGVH-PDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARC-- 292
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
G + A+ +F+ + E +S+ ++I GY ++
Sbjct: 293 -----------------------------GNLTKAQAVFDGMPERTLVSWTAIIGGYGMH 323
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY-M 387
G + + +LF++M I E + + ++S L ++ L+ + M
Sbjct: 324 GHGEIAVQLFKEMIRSGI-------------EPDGTAFVCVLSACSHAGLTDQGLEYFKM 370
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
R ++ +S + G L++ Q L + P + + V +L+
Sbjct: 371 MKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTL---IESMPIKPDGAVWGALLGACKIHK 427
Query: 448 SINDAQASFSSI---SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
++ A+ +F + N+ + L N YS+ S+ VL IM+++
Sbjct: 428 NVELAELAFERVIELEPENIGYYVLLSNIYSNAN-NSKGVLRIRIMMKE 475
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 3/212 (1%)
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WN+ + + +AL LY M + TF +C+ L G H +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSS--ISSPNVAAWTALMNGYSHHGLGSEA 483
K +V T L+ MY + +++A+ F S + AL++GY + S+A
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
VLLF M E+ + N+ T +G++ ACV + G + S YG + C + +
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G ++ A++ +MP++ + W A++S
Sbjct: 188 YMKCGSVNYAQKLFDEMPVK-GLISWNAMVSG 218
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/489 (32%), Positives = 266/489 (54%), Gaps = 22/489 (4%)
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+ G P+ ++++++ C +LG EGK+VH ++ F+ D I +L+ Y C +
Sbjct: 66 DCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSL 125
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGY 325
+GA R++D + + + + S+I G R DA L+F R+ E N + +S++K
Sbjct: 126 EGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCC 185
Query: 326 AVYGQVDDSKRL----FEKMPHRSIISLNTMISVIPEME--------------RNPVTWN 367
+ +++ ++ H ++ ++++ + +N V+WN
Sbjct: 186 GYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWN 245
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
++I+GY + E+AL L++ M++ T T+S L +CS +G L+QG+ LHAHL+K+
Sbjct: 246 ALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKS 305
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+ YVG +L+ MY++ GSI DA+ F + +V + +++ GY+ HGLG EA F
Sbjct: 306 SQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQF 365
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
+ M+ I PN TF+ VL+AC A L++EG F M+ Y + P + HY +VDLLGR+
Sbjct: 366 DEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRA 425
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L +A+ FI++MPIE +WGALL A N E+G AAQ++F LD + +L+
Sbjct: 426 GLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLA 485
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NIYA G+W +RK + VKK+P CSW+E+ + VH F D +P I+ E
Sbjct: 486 NIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWE 545
Query: 668 HLTANLNSV 676
L + +
Sbjct: 546 KLNQKIKEI 554
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 204/472 (43%), Gaps = 59/472 (12%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
+ T ++T+L C QL L +GK +H VL S ++ + + LLF YA C +E A+R+F
Sbjct: 73 DRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLF 132
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
DE+ + + W+ M+ GY Q + SDA +F +M DG E
Sbjct: 133 DEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLS-----------------DGAE--- 172
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
PNE+T S+++ C + ++ G+ +H K G + +G +L++
Sbjct: 173 -------------PNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDM 219
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISY 318
Y C AM V+D+L + N+LI G G E+A +F R+ +Y
Sbjct: 220 YARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTY 279
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRS----------IISLNTMISVIPEMER------- 361
++++ + G ++ K L + S ++ + I + E+
Sbjct: 280 SALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVK 339
Query: 362 -NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
+ V+ NSM+ GY Q+ L ++A Q + M + I+ TF + ACS L +G+
Sbjct: 340 VDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHY 399
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGL 479
+ K E V ++VD+ R G ++ A++ + P VA W AL+ H
Sbjct: 400 FGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKN 459
Query: 480 GSEAVLLFEIMLEQDI-VPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
+ + E D P T + + A AG + K+ + MK GV
Sbjct: 460 TEMGAYAAQRVFELDPSYPGTHTLLANIYA--SAGRWEDVAKVRKIMKDSGV 509
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 33/222 (14%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
R G L A +FD++ + VSWN ++ GY++ + +E+L+L M R + E T+S
Sbjct: 221 ARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYS 280
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+LS C+ + L GK +H ++KS + +VG+ LL YA I +A++VFD+L +
Sbjct: 281 ALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKV 340
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + + ML+GY Q L +A F +M + +
Sbjct: 341 DVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGI--------------------------- 373
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
PN+ TF SV+ AC+ EGK GL+ K E
Sbjct: 374 ------EPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIE 409
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 200/670 (29%), Positives = 317/670 (47%), Gaps = 96/670 (14%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
LF+ V + +ML YS + + + M V+ + + ++
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGN--- 112
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE--------------- 144
G H VLK G+ FV + ++ YA I A++VFDE
Sbjct: 113 --GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 145 ------------------LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
+ E N + W+ M+ GY + + A F MP++ VV W
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNA 230
Query: 187 LISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
++SGYA++ E+ L+LF M +G P+E T+ +VI AC+ G C + L +
Sbjct: 231 MLSGYAQN-GLAEEVLRLFDEMVNAGIE-PDETTWVTVISACSSRGDPCLAASLVRTLHQ 288
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
+ + + AL++ Y C + A R++D L
Sbjct: 289 KQIQLNCFVRTALLDMYAKCGSIGAARRIFDELG-------------------------- 322
Query: 307 FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
NS+++N+MI Y G +D ++ LF MP RN VTW
Sbjct: 323 ----AYRNSVTWNAMISAYTRVGNLDSARELFNTMP-----------------GRNVVTW 361
Query: 367 NSMISGYVQNNLHEKALQLY---MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
NSMI+GY QN A++L+ +T +KL D T + AC LG+L+ G +
Sbjct: 362 NSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEV--TMVSVISACGHLGALELGNWVVRF 419
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
L + + ++ +++ MYSRCGS+ DA+ F +++ +V ++ L++G++ HG G EA
Sbjct: 420 LTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEA 479
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
+ L M E I P+ TF+GVL+AC AGL+ EG K+F S+K P ++HY C+VDL
Sbjct: 480 INLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD----PAIDHYACMVDL 535
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
LGR G L +A+ ++ MP+E A V+G+LL+A +E+GE AA K+F L+ +
Sbjct: 536 LGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNF 595
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
++LSNIYA G+W IR+ + VKK G SW+E ++H F V DR++ + IY
Sbjct: 596 ILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIY 655
Query: 664 ATLEHLTANL 673
L L +
Sbjct: 656 QLLIELRKKM 665
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 191/396 (48%), Gaps = 36/396 (9%)
Query: 7 QSQTL--MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK 64
Q+Q L + E +++ +T + L AR FD MP R+VVSWN ML GY++
Sbjct: 181 QAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGL 240
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVC---------AQLNSLIDGKQIHCLVLKSGY 115
+E L L M + ++ +ETT+ T++S C A L + KQI
Sbjct: 241 AEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQL------- 293
Query: 116 ECFEFVGSGLLFFYANCFEIEEAKRVFDELHE-DNELLWSLMLVGYVQCNLMSDAFDVFI 174
C FV + LL YA C I A+R+FDEL N + W+ M+ Y + + A ++F
Sbjct: 294 NC--FVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFN 351
Query: 175 KMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAF 234
MP ++VV W +I+GYA++ A++LF+ M + + P+E T SVI AC LGA
Sbjct: 352 TMPGRNVVTWNSMIAGYAQNGQSA-MAIELFKEMITAKKLTPDEVTMVSVISACGHLGAL 410
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
G V L + + S A+I Y C + + A RV+ + + + N+LI+G
Sbjct: 411 ELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGF 470
Query: 295 ISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
+ G +A + + + E + +++ ++ + G +++ +++FE + +I
Sbjct: 471 AAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYA 530
Query: 351 TMISVIPE----------MERNPVTWNSMISGYVQN 376
M+ ++ MER P+ ++ + G + N
Sbjct: 531 CMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLN 566
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 11/187 (5%)
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC-GSINDAQASFSSISSPNVAAW 467
S +G+ + LHA ++ + Y L++ +R + F+S +PNV +
Sbjct: 9 SRVGNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVF 68
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
T+++ YSH ++ VL+FE M + P+A + ++ + AG N G+ +
Sbjct: 69 TSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKS---AG--NGGIGFHAHVLK 123
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP-IELDAVVWGALLSACWFWMNMEVGE 586
G V+D+ R G + A + ++P E W A++S W W + E
Sbjct: 124 LGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWES----E 179
Query: 587 RAAQKMF 593
AQ +F
Sbjct: 180 GQAQWLF 186
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 207/695 (29%), Positives = 339/695 (48%), Gaps = 87/695 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQM-PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N +T + G + AR +FD M +R +VSW M ++ E+L L+ M S +
Sbjct: 83 NSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGL 142
Query: 81 KLNETTFSTILSVCAQLNSL-IDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEA 138
+ N T C G + +K+G+ + VG L+ +A ++ A
Sbjct: 143 RPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAA 202
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
++VF+ L E + VVVWT +I+ Y + GC
Sbjct: 203 RKVFNGLVE-------------------------------RTVVVWTLMITRYVQG--GC 229
Query: 199 E-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
KA++LF M E G P+ YT S++ ACA G+ G+ +H L+++ G D +
Sbjct: 230 AGKAVELFLGMLEDGFE-PDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSC 288
Query: 258 ALIEFYCGCE---AFDGAMRVYDRLENPCLNASNSLINGLISMGRIED--AELI---FNR 309
L++ Y + + + A +V+ R+ + + +LI+G + G E+ EL+ N
Sbjct: 289 GLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNE 348
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
E N ++Y+S++K A D +++ ++ SI ++N V N++
Sbjct: 349 SIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVN-------------VVGNAL 395
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRS--------------------------TFSV 403
+S Y ++ E+A + + + + + T S TF+
Sbjct: 396 VSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESMDVGVSTFTFAS 455
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP- 462
L A + +G +GQ LHA +KT FES+ + SLV MYSRCG ++DA +F +
Sbjct: 456 LLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDH 515
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
NV +WT++++ + HG A+ LF M+ + PN T++ VLSAC GLV EG + F
Sbjct: 516 NVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYF 575
Query: 523 RSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMN 581
RSM K + ++P +EHY C+VDLL RSG + EA EFI +MP + DA+VW LL AC + N
Sbjct: 576 RSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYEN 635
Query: 582 MEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
+E+GE AA+ + L+ + + YV+LSN+YA G W + IR + H + K+ G SW+
Sbjct: 636 IEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMH 695
Query: 642 LNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ + +H F D ++P IYA L L + +
Sbjct: 696 VGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDI 730
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 32/289 (11%)
Query: 297 MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+GR L+ + +A+++ NS++ Y+ G V ++R+F+ M R +
Sbjct: 61 LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGM--RGL---------- 108
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL-- 414
R+ V+W +M +N ++AL L M + + T HAC G L
Sbjct: 109 ----RDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHAC-FPGELFR 163
Query: 415 QQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
G + +KT F ++V VG +L+DM++R G + A+ F+ + V WT ++
Sbjct: 164 SSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITR 223
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT 533
Y G +AV LF MLE P+ T ++SAC G G ++ + G+V
Sbjct: 224 YVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSD 283
Query: 534 LEHYTCV----VDL---LGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
TCV VD+ L + A + K MP + + W AL+S
Sbjct: 284 ----TCVSCGLVDMYTKLQMEQSMECARKVFKRMPTH-NVMSWTALISG 327
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 192/623 (30%), Positives = 315/623 (50%), Gaps = 62/623 (9%)
Query: 41 FDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSL 100
F +MPIR VVSW T++ G+ + + M + K+N T +++L+ C + +
Sbjct: 306 FLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMI 365
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
+ Q+H + K+G+ V S L+ Y+ ++ ++RVF E+
Sbjct: 366 KEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMES------------- 412
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
K++ +W +IS +A+S +A++LF+ M + G P+++
Sbjct: 413 -----------------TKNLAMWAVMISAFAQS-GSTGRAVELFQRMLQEGLR-PDKFC 453
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
SV+ L G+++H ++K G D S+G +L Y C + + + V++++
Sbjct: 454 SSSVLSIIDSLSL---GRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMP 510
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNR------------LTEA-------NSISYNSM 321
+ + S+I G E A +F LT A +S+
Sbjct: 511 DKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKE 570
Query: 322 IKGYAVYGQVDDSKRLFEKMPHR-----SIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
+ GYA+ +V + + + +I+ + ++P+ ++ + +S++SGY QN
Sbjct: 571 VHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQ--KDQFSCSSLVSGYAQN 628
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
E AL L+ +R + T S + A + L SL G LHA + K + V VG
Sbjct: 629 GYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVG 688
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+SLV MYS+CGSI++ F I P++ +WTA++ Y+ HG G+EA+ ++++M ++
Sbjct: 689 SSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTK 748
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
P++ TFVGVLSAC G+V EG SM K YG+ P HY C+VDLLGRSG L EAE
Sbjct: 749 PDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAER 808
Query: 556 FIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615
FI +MPIE DA++WG LL+AC ++E+G AA+++ L+ AYV LSNI A +G
Sbjct: 809 FINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGW 868
Query: 616 WGKKMDIRKRLTHLEVKKDPGCS 638
W M IR + VKK+PG S
Sbjct: 869 WEDVMKIRSLMEGTGVKKEPGWS 891
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 246/546 (45%), Gaps = 71/546 (13%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+K QS T MT N + ++ +V A LFD+ P V+SWN ++ G +
Sbjct: 72 LKTAILQSNTFMT--------NSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCN 123
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ F++S M S N+ T+ ++LS C L S + G+ ++ L LK+G+ +
Sbjct: 124 QNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGY 183
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
V +G++ +A E+A RVF ++ +N + W+ ++ G V+ A D+F
Sbjct: 184 VRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLF------- 236
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
C+ + F MPN +TF S++ ACA L G+ V
Sbjct: 237 -----------------CQMCCRFF---------MPNSFTFSSILTACAALEELEFGRGV 270
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
G +IKCG D +G A+I+ Y C D A++ + R+ + + ++I+G +
Sbjct: 271 QGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDS 330
Query: 301 EDAELIFNRLTEAN-----------------------SISYNSMIKGYAVYGQVDDSKRL 337
A F + + ++ +S I Y + S L
Sbjct: 331 ISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSAL 390
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK--LAID 395
++ L+ + E +N W MIS + Q+ +A++L+ M + L D
Sbjct: 391 INMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPD 450
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
+ S+ SVL S + SL G+L+H +++K +++ VG+SL MYS+CGS+ ++
Sbjct: 451 KFCSS-SVL----SIIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTV 505
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F + + +W +++ G+S H +AV LF ML ++I P+ T L+AC +
Sbjct: 506 FEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSL 565
Query: 516 NEGMKI 521
+G ++
Sbjct: 566 EKGKEV 571
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/559 (24%), Positives = 250/559 (44%), Gaps = 58/559 (10%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +F + VV WN ++ G K + +L L M N TFS+IL+ CA
Sbjct: 201 ALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAA 260
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L L G+ + V+K G FVG+ ++ YA C ++++A + F + N + W+ +
Sbjct: 261 LEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTI 320
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ G+VQ K D + A F+ MR+ GE +
Sbjct: 321 ISGFVQ---------------KDDSI-----------------SAFHFFKEMRKVGEKI- 347
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
N YT SV+ AC E +H + K GF D ++ ALI Y D + RV+
Sbjct: 348 NNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVF 407
Query: 277 DRLEN-PCLNASNSLINGLISMGRIEDAELIFNRLTEA----------------NSISYN 319
+E+ L +I+ G A +F R+ + +S+S
Sbjct: 408 REMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSLG 467
Query: 320 SMIKGY----AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-ERNPVTWNSMISGYV 374
+I Y ++ + LF + SL +V +M +++ V+W SMI+G+
Sbjct: 468 RLIHCYILKIGLFTDISVGSSLFTM--YSKCGSLEESYTVFEQMPDKDNVSWASMITGFS 525
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
+++ E+A+QL+ M I + T + ACS L SL++G+ +H + ++ V
Sbjct: 526 EHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVL 585
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
VG +LV+MYS+CG+I A+ F + + + ++L++GY+ +G +A+LLF + D
Sbjct: 586 VGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMAD 645
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
+ ++ T V+ A ++ G ++ + G+ + + +V + + G + E
Sbjct: 646 LWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECH 705
Query: 555 EFIKDMPIELDAVVWGALL 573
+ + + + D + W A++
Sbjct: 706 KVFEQIE-KPDLISWTAMI 723
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 212/452 (46%), Gaps = 29/452 (6%)
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ N + + ++ Y + N M A +F K P +V+ W LISG ++ E + + F
Sbjct: 78 QSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFS-FEDSWRNFC 136
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
MR SG + PN++T+ SV+ AC LG+ G++V+ L +K GF + + +I+ +
Sbjct: 137 KMRFSGFD-PNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKL 195
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----NRLTEANSISYNSMI 322
+F+ A+RV+ + + N++I+G + A +F R NS +++S++
Sbjct: 196 CSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSIL 255
Query: 323 K----------GYAVYGQVDDSKRLFEKMPHRSIISL----NTMISVIPEMERNP----V 364
G V G V + +II L M + E R P V
Sbjct: 256 TACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVV 315
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+W ++ISG+VQ + A + MRK+ T + + AC+ +++ LH+ +
Sbjct: 316 SWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWI 375
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGYSHHGLGSEA 483
KT F + V ++L++MYS+ G ++ ++ F + S+ N+A W +++ ++ G A
Sbjct: 376 FKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRA 435
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
V LF+ ML++ + P+ VLS L G I + G+ + + + +
Sbjct: 436 VELFQRMLQEGLRPDKFCSSSVLSIIDSLSL---GRLIHCYILKIGLFTDISVGSSLFTM 492
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G L E+ + MP + D V W ++++
Sbjct: 493 YSKCGSLEESYTVFEQMP-DKDNVSWASMITG 523
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 185/412 (44%), Gaps = 53/412 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L + +F+QMP + VSW +M+ G+S+ ++++ L M ++ ++ T + L
Sbjct: 497 GSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAAL 556
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ C+ L+SL GK++H L++ VG L+ Y+ C I A+RVFD L + ++
Sbjct: 557 TACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQF 616
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
S ++ GY Q + DA +F ++ D+ W+
Sbjct: 617 SCSSLVSGYAQNGYIEDALLLFHEIRMADL-------------------------WI--- 648
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+ +T SVI A A L + G +H + K G + S+G +L+ Y C + D
Sbjct: 649 -----DSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDE 703
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAV 327
+V++++E P L + ++I G+ +A +++ + T+ +S+++ ++ +
Sbjct: 704 CHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSH 763
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V+ E H LN+M +E + M+ ++ ++A +
Sbjct: 764 NGMVE------EGYSH-----LNSMAKEYG-IEPGYYHYACMVDLLGRSGRLKEAERF-- 809
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTS 438
+ + I+ + +L AC G ++ G+L +++ P E+ YV S
Sbjct: 810 -INNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLS 860
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 132/278 (47%), Gaps = 20/278 (7%)
Query: 299 RIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE 358
+I A + + ++N+ NS++ Y + + RLF+K PH ++IS
Sbjct: 65 KILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVIS---------- 114
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
WN +ISG QN E + + + MR D + T+ + AC+ LGS G+
Sbjct: 115 -------WNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGE 167
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
L+++ +K F SN YV ++D++++ S DA F + NV W A+++G +
Sbjct: 168 LVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNR 227
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
A+ LF M + +PN+ TF +L+AC + G + + G + T
Sbjct: 228 ENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGT 287
Query: 539 CVVDLLGRSGHLHEA-EEFIKDMPIELDAVVWGALLSA 575
++DL + + +A +EF++ MPI + V W ++S
Sbjct: 288 AIIDLYAKCRDMDQAVKEFLR-MPIR-NVVSWTTIISG 323
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 166/361 (45%), Gaps = 23/361 (6%)
Query: 238 KVVHGLLIKCG-FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
K++H +K + + + +L+ +YC + A+R++D+ +P + + N LI+G
Sbjct: 65 KILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQ 124
Query: 297 MGRIEDAELIFNRLT----EANSISYNSMIK-----GYAVYGQVDDSKRL----FEKMPH 343
ED+ F ++ + N +Y S++ G +YG++ S L F
Sbjct: 125 NFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYV 184
Query: 344 RS-IISLNTMISVIPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
R+ +I L + + R N V WN++ISG V+N + AL L+ M
Sbjct: 185 RAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFF 244
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
TFS + AC+ L L+ G+ + ++K +V+VGT+++D+Y++C ++ A
Sbjct: 245 MPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVK 304
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F + NV +WT +++G+ A F+ M + N T VL+AC +
Sbjct: 305 EFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVM 364
Query: 515 VNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+ E +++ + G + ++++ + G + +E ++M + +W ++S
Sbjct: 365 IKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMIS 424
Query: 575 A 575
A
Sbjct: 425 A 425
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Query: 413 SLQQGQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
+L+ ++LHAH +KT +SN ++ SL+ Y + S+ A F PNV +W L+
Sbjct: 60 TLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILI 119
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
+G + + ++ F M PN T+ VLSAC G G ++ G
Sbjct: 120 SGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFF 179
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++DL + +A +D+ E + V W A++S
Sbjct: 180 SNGYVRAGMIDLFAKLCSFEDALRVFQDVLCE-NVVCWNAIISG 222
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
+T + G + +F+Q+ ++SW M+ Y++ K E+L + M + K +
Sbjct: 692 VTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDS 751
Query: 85 TTFSTILSVCAQLNSLIDG-KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
TF +LS C+ + +G ++ + + G E + + ++ ++EA+R +
Sbjct: 752 VTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFIN 811
Query: 144 ELH-EDNELLWSLMLVG 159
+ E + LLW ++L
Sbjct: 812 NMPIEPDALLWGILLAA 828
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 203/715 (28%), Positives = 348/715 (48%), Gaps = 84/715 (11%)
Query: 23 KAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL-VSTMHRSNVK 81
+ IT G +R+ FD + + + WN ++ YS+ + E L + + + ++++
Sbjct: 125 RIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLL 184
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA---------NC 132
+ TF ++ CA ++ + G +H LV+K+G FVG+ L+ FY
Sbjct: 185 PDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKL 244
Query: 133 FEIEEAK---------RVFDELHEDNELL---------------------------WSL- 155
F+I + RVF + +D + W++
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVK 304
Query: 156 ------------MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
++ Y + + D+ +F K+VV W ++ G++ D
Sbjct: 305 LSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGD-IHGTFD 363
Query: 204 LFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
L R M E++ +E T + + C K +H +K F +DE + A +
Sbjct: 364 LLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVAS 423
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLING----------LISMGRIEDAELIFNRLTE 312
Y C + A RV+ + + LN+ N+LI G L + +++++ L+ + T
Sbjct: 424 YAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTV 483
Query: 313 ANSISYNSMIK----GYAVYGQVDDSKRLFEKMPHRSIISLN-------TMISVIPEMER 361
+ +S S +K G V+G + + + + S++SL T+ + ME
Sbjct: 484 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMED 543
Query: 362 NP-VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
N V+WN++I+G++QN E+AL L+ M I + +F ACS L SL+ G+
Sbjct: 544 NSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREA 603
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA+ +K E N ++ S++DMY++ G+I + F+ + + A+W A++ GY HG
Sbjct: 604 HAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRA 663
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTC 539
EA+ LFE M P+ TF+GVL+AC +GL++EG++ MKS +G+ P L+HY C
Sbjct: 664 KEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYAC 723
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
V+D+LGR+G L A +M E D +W +LLS C N+E+GE+ A K+F L+ +
Sbjct: 724 VIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEK 783
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
YV+LSN+YA LGKW +R+R+ + ++KD GCSWIELN +V +F V +R
Sbjct: 784 PENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGER 838
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/499 (23%), Positives = 207/499 (41%), Gaps = 95/499 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-- 75
+V N + + G ++ ++ +F + VVSWNTM+ G+S + L+ M
Sbjct: 311 LVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLA 370
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+VK +E T + VC + L K++HC LK + E + + + YA C +
Sbjct: 371 GSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSL 430
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A+RVF + K + W LI GYA+S
Sbjct: 431 SYAQRVFHGIRS-------------------------------KTLNSWNALIGGYAQSS 459
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
D +L M+ SG +P+ +T S++ AC++L + GK VHG +I+ E D +
Sbjct: 460 DP-RLSLDAHLQMKNSGL-LPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 517
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR------ 309
+++ Y C ++D +E+ L + N++I G + G E A +F +
Sbjct: 518 YLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGI 577
Query: 310 ---------------------------------LTEANSISYNSMIKGYAVYGQVDDSKR 336
L E N+ S+I YA G + S +
Sbjct: 578 QPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSK 637
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F + E++ +WN+MI GY + ++A++L+ M++ +
Sbjct: 638 VFNGLK-----------------EKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNP 680
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDAQA 454
TF + AC+ G L +G L + +K+ F + N+ ++DM R G +++A
Sbjct: 681 DDLTFLGVLTACNHSGLLHEG-LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALR 739
Query: 455 SFSSIS-SPNVAAWTALMN 472
+ +S P+V W +L++
Sbjct: 740 VAAEMSEEPDVGIWNSLLS 758
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 167/380 (43%), Gaps = 23/380 (6%)
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+++L + ++ Y C D+ F + K++ W +IS Y+++ + + L++F M
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRN-ELYHEVLEMFIKM 177
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+P+ +TF VI+ACA + G VHGL++K G D +G AL+ FY G
Sbjct: 178 ISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFY-GTHG 236
Query: 269 F-DGAMRVYDRLENPCLNASNSLINGLISMGR----IEDAELIFNRL---TEANSISYNS 320
F A++++D + L + NS+I G + D + L I
Sbjct: 237 FVSDALKLFDIMPERNLVSWNSMIRVFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGK 296
Query: 321 MIKGYAVYGQVDD----SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
+ G+AV +D + L + I + MI + +N V+WN+M+ G+
Sbjct: 297 GVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNN-NKNVVSWNTMVGGFSAE 355
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC-----LGSLQQGQLLHAHLVKTPFES 431
L M + D ++L C L SL++ LH + +K F
Sbjct: 356 GDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKE---LHCYSLKQEFVY 412
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+ + + V Y++CGS++ AQ F I S + +W AL+ GY+ ++ M
Sbjct: 413 DELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMK 472
Query: 492 EQDIVPNAATFVGVLSACVR 511
++P+ T +LSAC +
Sbjct: 473 NSGLLPDNFTVCSLLSACSK 492
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVK--TPFESNVYVGTSLVDMYSRCGSINDAQA 454
R +L A ++ G+ +H HLV T S+ + T ++ MY+ CGS +D+++
Sbjct: 83 VREALGLLLQASGKRKDIEMGRKIH-HLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRS 141
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAG 513
+F ++ S N+ W A+++ YS + L E + +F M+ + ++P+ TF V+ AC
Sbjct: 142 AFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGIS 201
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V G+ + + G+V L +V G G + +A + MP E + V W +++
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMP-ERNLVSWNSMI 260
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 166/457 (36%), Positives = 250/457 (54%), Gaps = 22/457 (4%)
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
W I G+ S + +A+ L++ + + P+ YT+ + +ACARL G + G
Sbjct: 118 WNVAIRGFLDS-ENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 176
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA 303
++ GF+ D + A+I C DGA +++D+ L + NS+ING G +E A
Sbjct: 177 VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYC--GNLESA 234
Query: 304 ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP 363
+F+ +T +S+ +M+ GYA G +D + +LF++MP + +
Sbjct: 235 RKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDV----------------- 277
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
V WN+MI GYV N ++AL L+ M+ + I+ T ACS LG+L G +H +
Sbjct: 278 VPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHY 337
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
+ K NV +GT+L+DMY++CG I A F + N WTA+++G + HG A
Sbjct: 338 IEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGA 397
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVD 542
+ F M++ ++P+ TF+G+LSAC GLV EG K F M S + + P L+HY+C+VD
Sbjct: 398 IAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVD 457
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISA 602
LLGR+G L EAEE IK MPIE DAVVWGAL AC N+ +GERAA K+ +D
Sbjct: 458 LLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGI 517
Query: 603 YVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSW 639
YV+L+N+Y W + RK + V+K P SW
Sbjct: 518 YVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPD-SW 553
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 192/428 (44%), Gaps = 54/428 (12%)
Query: 51 SWNTMLCGYSKWAKFDESLSLVS-TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCL 109
SWN + G+ E++ L + K + T+ + CA+L+ + G +I
Sbjct: 117 SWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 176
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEI-----------------------------EEAKR 140
VL G++ FV + ++ +C ++ E A++
Sbjct: 177 VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYCGNLESARK 236
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+FD + + W+ M+VGY Q L+ A+ +F +MP KDVV W +I GY + G E
Sbjct: 237 LFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKE- 295
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL LF M+ N P+E T S + AC++LGA G +H + K + ++G ALI
Sbjct: 296 ALALFNEMQAMNIN-PDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALI 354
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSI 316
+ Y C A++V+ L ++I+GL G A F+ + + + +
Sbjct: 355 DMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEV 414
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
++ ++ G V++ ++ F +M + +S P+++ ++ M+ +
Sbjct: 415 TFLGLLSACCHGGLVEEGRKYFSQMSSKFNLS--------PKLKH----YSCMVDLLGRA 462
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYV 435
L E+A +L ++ + I+ + LF AC G++ G+ + L++ P +S +YV
Sbjct: 463 GLLEEAEEL---IKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYV 519
Query: 436 GTSLVDMY 443
L +MY
Sbjct: 520 --LLANMY 525
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 34/227 (14%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
MT +T+ VS + ++G L A LFD+MP + VV WN M+ GY + E+L+L
Sbjct: 241 MTNKTM-VSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALAL 299
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ M N+ +E T + LS C+QL +L G IH + K +G+ L+ YA
Sbjct: 300 FNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAK 359
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C +I +A +VF EL P ++ + WT +ISG
Sbjct: 360 CGKITKAIQVFQEL-------------------------------PGRNSLTWTAIISGL 388
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
A + A+ F M ++ MP+E TF ++ AC G EG+
Sbjct: 389 ALHGNA-HGAIAYFSEMIDNSV-MPDEVTFLGLLSACCHGGLVEEGR 433
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 93/237 (39%), Gaps = 36/237 (15%)
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ--G 417
+ NP+ WN+ S + N F L C + L+Q
Sbjct: 35 KENPINWNTNHSFVLSN-----------------------PFLSLLEKCKSISQLKQIQS 71
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
Q++ L++ F S+ + + S ++ + +PN +W + G+
Sbjct: 72 QMVLTGLIEDGFASSRLIAFCAI---SEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDS 128
Query: 478 GLGSEAVLLFEIMLEQD-IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
EAV+L++ +L+ D P+ T+ + AC R L+ G +I + G +
Sbjct: 129 ENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFV 188
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
V+ LL G L A + D D V W ++++ + N+E +A+K+F
Sbjct: 189 SNAVIHLLVSCGDLDGARKMF-DKSCVRDLVSWNSMING--YCGNLE----SARKLF 238
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 195/674 (28%), Positives = 324/674 (48%), Gaps = 61/674 (9%)
Query: 24 AITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLN 83
A + G L AR +FD++P VSWN++L + ++ L+ MH + +
Sbjct: 35 AYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGLTAS 94
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
+ L A G Q+ +KSG F S LL YA
Sbjct: 95 TFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYA------------- 141
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+C +SDA VF MP ++ V W LI+GYA+S + A++
Sbjct: 142 ------------------KCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQ-AME 182
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
LF M+ E +P++ TF +++ + + +HG + K G + A I Y
Sbjct: 183 LFLEMQRV-ELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAY 241
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI-----SY 318
C AF + R++D +++ L + NS++ G ++A F R+ + + S+
Sbjct: 242 SQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSF 301
Query: 319 NSMIKGYAVYGQVDDSKRL---------FEKMPH--RSIISLNTMISVIPEME------- 360
S++ + +G D R E + H ++I++ T + ME
Sbjct: 302 TSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFD 361
Query: 361 ----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
++ V+WNSM++GY + L AL+ + MR + S +CS L L+
Sbjct: 362 SLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRL 421
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +H+ ++++ F SN +V +SL+ MYS+CG + DA+ SF + W ++M GY+
Sbjct: 422 GRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQ 481
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP-TLE 535
HG LF ML+ + + TFV +L+A GLV+EG +I SM++ +P +E
Sbjct: 482 HGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRME 541
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
HY C VDL GR+G L +A+E I+ MP + DA+VW LL AC NME+ A +F
Sbjct: 542 HYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELASDVASHLFVA 601
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN 655
+ + S YV+LS++Y+ G W + ++K + + + K PG SWIE+ + VH+F+ +DR+
Sbjct: 602 EPRQHSTYVLLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWIEVKNEVHSFNADDRS 661
Query: 656 NPNCNVIYATLEHL 669
+P + I+ L L
Sbjct: 662 HPRMDEIFDMLRML 675
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 191/619 (30%), Positives = 314/619 (50%), Gaps = 57/619 (9%)
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M+ N+ + T +L+ A + L GKQ+H + +KSG + V + L+ Y+
Sbjct: 895 MNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGC 954
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
A+ VF+++ + + W+ M+ Q +L ++ ++FI
Sbjct: 955 AYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFI-------------------- 994
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL-GAFCEGKVVHGLLIKCGFEFDE 253
D + LK P+ +T SV+RAC+ L + +H +K G D
Sbjct: 995 -DLLHEGLK------------PDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADS 1041
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI----SMGRIEDAELIFNR 309
+ LI+ Y + A ++ ++ L N+++ G I +E LI
Sbjct: 1042 FVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKS 1101
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFE---KMPHRSIISLNTMI------------- 353
+++ I+ + K +D K++ K S + +N+ I
Sbjct: 1102 GEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNA 1161
Query: 354 SVIPEMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
++ P V W SMISG V N ++AL++Y MR+ + TF+ L A SC+
Sbjct: 1162 GIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCV 1221
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
+L+QG+ LHA+++K S+ +VGTSLVDMY++CG+I DA F ++ N+A W A++
Sbjct: 1222 TALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAML 1281
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGV 530
G + HG EAV LF+ M I P+ +F+G+LSAC AGL +E + SM + YG+
Sbjct: 1282 VGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGI 1341
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
P +EHY+C+VD LGR+G + EA++ I+ MP + A + ALL AC ++E G+R A
Sbjct: 1342 EPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAA 1401
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
++F L+ +AYV+LSNIYA +W D RK + VKKDPG SWI++ + +H F
Sbjct: 1402 RLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFV 1461
Query: 651 VEDRNNPNCNVIYATLEHL 669
V+DR++P ++IY +E +
Sbjct: 1462 VDDRSHPQADIIYDKVEEM 1480
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 163/664 (24%), Positives = 300/664 (45%), Gaps = 82/664 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGY-----SKWAKFDESLSLVSTM 75
+N +T + G L +AR +FD P R +V+WN +L Y S E L L +
Sbjct: 659 SNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLL 718
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
S T + +L +C L + +H +K G E FV L+ Y+ C +
Sbjct: 719 RASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRM 778
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV-------------- 181
+A+ +FD + E + +LW++ML GYVQ L +AF +F + + +
Sbjct: 779 RDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGV 838
Query: 182 --VVWTK------LISGYAKSVDGCEKALKLFRWMRE------SGENMP----------- 216
V W + + YA + + +F W ++ +G+N
Sbjct: 839 SEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGL 898
Query: 217 ----NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC--GCEAFD 270
+ T V+ A A GK VHG+ +K G + D S+ +L+ Y GC F
Sbjct: 899 NIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYF- 957
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----------NRLTEANSI-SYN 319
A V++ +++ L + NS+I+ E++ +F + T A+ + + +
Sbjct: 958 -AREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACS 1016
Query: 320 SMIKGYAVYGQVD----DSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTWN 367
S+I G + Q+ + + + ++I + + + E E + WN
Sbjct: 1017 SLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWN 1076
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+M+ GY+ N +KAL+L+ + K + T + AC CL L QG+ +HAH +K
Sbjct: 1077 AMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKA 1136
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F+S+++V + ++DMY +CG + +A F+ IS+P+ AWT++++G +G +A+ ++
Sbjct: 1137 GFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIY 1196
Query: 488 EIMLEQDIVPNAATFVGVL--SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
M + ++P+ TF ++ S+CV A + +G ++ ++ V T +VD+
Sbjct: 1197 HRMRQSRVMPDEYTFATLIKASSCVTA--LEQGRQLHANVIKLDCVSDPFVGTSLVDMYA 1254
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME--VGERAAQKMFGLDKKPISAY 603
+ G++ +A K M + + +W A+L N E V + K G++ +S
Sbjct: 1255 KCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFI 1313
Query: 604 VILS 607
ILS
Sbjct: 1314 GILS 1317
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 223/521 (42%), Gaps = 105/521 (20%)
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L ++L+ GK H ++ SG F+ + LL Y+ C + A++VFD
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFD------ 680
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG----CEKALKLF 205
P++D+V W ++ YA SVD ++ L LF
Sbjct: 681 -------------------------TTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLF 715
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
R +R S T V++ C G + VHG IK G E+D + GAL+ Y
Sbjct: 716 RLLRAS-LGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSK 774
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
C GR+ DA L+F+ + E + + +N M+KGY
Sbjct: 775 C-------------------------------GRMRDARLLFDWMRERDVVLWNMMLKGY 803
Query: 326 AVYGQVDDSKRLFEKMPHRSII-----SLNTMISVIPEM--------------------- 359
G ++ +LF + HRS + S+ +++ + E+
Sbjct: 804 VQLGLEKEAFQLFSEF-HRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSL 862
Query: 360 -ERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
+ NP WN +S + + A++ ++ M L ID T V+ A + L+
Sbjct: 863 SDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLEL 922
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +H VK+ +S+V V SLV+MYS+ G A+ F+ + ++ +W ++++ +
Sbjct: 923 GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ 982
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY----GVVP 532
L E+V LF +L + + P+ T VL AC + L+ +G+ I R + + G +
Sbjct: 983 SSLEEESVNLFIDLLHEGLKPDHFTLASVLRAC--SSLI-DGLNISRQIHVHALKTGNIA 1039
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
T ++D+ +SG + EA EF+ +LD W A++
Sbjct: 1040 DSFVATTLIDVYSKSGKMEEA-EFLFQNKDDLDLACWNAMM 1079
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 196/440 (44%), Gaps = 55/440 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++G++ A LF + WN M+ GY ++L L S +H+S K ++ T +T
Sbjct: 1053 KSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLAT 1112
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
C L L GKQIH +K+G++ V SG+L Y C ++ A VF+
Sbjct: 1113 AAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN------ 1166
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+I P D V WT +ISG + + ++AL+++ MR
Sbjct: 1167 -----------------------YISAP--DDVAWTSMISGCVDNGNE-DQALRIYHRMR 1200
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+S MP+EYTF ++I+A + + A +G+ +H +IK D +G +L++ Y C
Sbjct: 1201 QS-RVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNI 1259
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGY 325
+ A R++ ++ + N+++ GL G E+A +F + E + +S+ ++
Sbjct: 1260 EDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSAC 1319
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
+ G ++ MP+ I PE+E ++ ++ + L ++A ++
Sbjct: 1320 SHAGLTSEAYEYLHSMPNDYGIE--------PEIEH----YSCLVDALGRAGLVQEADKV 1367
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYS 444
TM + S L AC G ++ G+ + A L PF+S YV L ++Y+
Sbjct: 1368 IETM---PFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYV--LLSNIYA 1422
Query: 445 RCGSINDAQASFSSISSPNV 464
+D + + NV
Sbjct: 1423 AANRWDDVTDARKMMKRKNV 1442
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 21/215 (9%)
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY-- 474
G+ HA +V + + ++ +L+ MYS+CGS++ A+ F + ++ W A++ Y
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 475 ---SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
S+ G E + LF ++ T VL C+ +G + + G+
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 759
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG-ERAAQ 590
+ +V++ + G + +A + D E D V+W +L +++G E+ A
Sbjct: 760 WDVFVSGALVNIYSKCGRMRDA-RLLFDWMRERDVVLWNMMLKGY-----VQLGLEKEAF 813
Query: 591 KMF------GLDKKPISAYVILSNIYAV---LGKW 616
++F GL S +IL+ + V GKW
Sbjct: 814 QLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW 848
>gi|345505220|gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
Length = 612
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 174/526 (33%), Positives = 280/526 (53%), Gaps = 56/526 (10%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+D +W +I ++ +D KAL LF M E+G ++ ++++ V++AC+RLG EG
Sbjct: 84 EDPFLWNAVIKSHSHGLDP-RKALLLFCLMLETGVSV-DKFSLSLVLKACSRLGFVKEGM 141
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+HG L K G D + LI Y C A +V+DR+ + NS+I+G + G
Sbjct: 142 QIHGFLRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGYVKCG 201
Query: 299 RIEDA----------------------------------ELIFNRLTEANSISYNSMIKG 324
IE A + +F+ + E + IS+NS+I G
Sbjct: 202 MIESARGLFDLMPKEKKNLISWNFMISGYAQRADGVNVAKKLFDEMPEKDLISWNSLIDG 261
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEME-RNPVTWNSMI 370
Y +G+++D+K LF KMP R +++ TM+ S+ M R+ V +NSMI
Sbjct: 262 YVKHGRMEDAKSLFNKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDRMPLRDVVAYNSMI 321
Query: 371 SGYVQNNLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+GYVQN H++A+ ++ M K L+ D T T ++ A + LG L + +H +++
Sbjct: 322 TGYVQNRYHKEAIGIFNDMEKESHLSPDET--TLVIVLSAIAQLGRLSKAVDIHLYIMDN 379
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F +G +L+D YS+CGSI + F I + ++ W A++ G + HGLG A +
Sbjct: 380 KFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDML 439
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
+ ++ I P+ TF+GVL+AC +GLV EG+ F M + + + P L+HY C+VD+L R
Sbjct: 440 LQIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSR 499
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
SG + A+ I++MPIE + V+W L+AC E GE A+ +F S++V+L
Sbjct: 500 SGSIELAKNLIEEMPIEPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVLL 559
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
SN+YA G W + +R + +++K PGCSWIEL+ VH F V+
Sbjct: 560 SNMYASFGMWKEVRRVRTTMKERKLRKIPGCSWIELDGNVHEFFVD 605
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 193/423 (45%), Gaps = 32/423 (7%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+MP R VS+N+M+ GY K + + L M + K N +++ ++
Sbjct: 170 GCLGYARQVFDRMPRRDSVSYNSMIDGYVKCGMIESARGLFDLMPKE--KKNLISWNFMI 227
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S AQ DG + + E + L+ Y +E+AK +F+++ + + +
Sbjct: 228 SGYAQ---RADGVNVAKKLFDEMPEKDLISWNSLIDGYVKHGRMEDAKSLFNKMPKRDVV 284
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY + + A +F +MP +DVV + +I+GY ++ E A+ +F M +
Sbjct: 285 TWATMVDGYAKLGFVHQAKSLFDRMPLRDVVAYNSMITGYVQNRYHKE-AIGIFNDMEKE 343
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T V+ A A+LG + +H ++ F +G ALI+ Y C +
Sbjct: 344 SHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQK 403
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSISYNSMIKGYAV 327
+MRV++ +EN ++ N++I GL G E A I R + + I++ ++ +
Sbjct: 404 SMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFIGVLNACSH 463
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V + FE M + I P+++ + M+ ++ E A L
Sbjct: 464 SGLVKEGLLCFELMRRKHKIE--------PKLQH----YGCMVDILSRSGSIELAKNL-- 509
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV---DMYS 444
+ ++ I+ + ACS + G+L+ HL F Y +S V +MY+
Sbjct: 510 -IEEMPIEPNDVIWRTFLTACSNHKEFETGELVAKHL----FLQGGYNPSSFVLLSNMYA 564
Query: 445 RCG 447
G
Sbjct: 565 SFG 567
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 65/255 (25%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E ++S N I ++G++ A++LF++MP R VV+W TM+ GY+K ++ SL
Sbjct: 249 EKDLISWNSLIDGYVKHGRMEDAKSLFNKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDR 308
Query: 75 M--------------------HR------------SNVKLNETTFSTILSVCAQLNSLID 102
M H+ S++ +ETT +LS AQL L
Sbjct: 309 MPLRDVVAYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSK 368
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
IH ++ + + +G L+ Y+ C I+++ RVF+E+ + W+ M+ G
Sbjct: 369 AVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAI 428
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
L AFD+ +++ K+ + P++ TF
Sbjct: 429 HGLGESAFDMLLQIEKRSI---------------------------------KPDDITFI 455
Query: 223 SVIRACARLGAFCEG 237
V+ AC+ G EG
Sbjct: 456 GVLNACSHSGLVKEG 470
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 191/677 (28%), Positives = 324/677 (47%), Gaps = 59/677 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNV 80
N + + + GQL +R +FD+M R +SW T++ GY + E+L L S M + +
Sbjct: 94 NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ ++ S L C ++ G+ +H +KSG FV S L+ Y +IE+ R
Sbjct: 154 QRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCR 213
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF KM K++VV WT +I+G + E
Sbjct: 214 VFK-------------------------------KMTKRNVVSWTAIIAGLVHAGYNMEA 242
Query: 201 ALKLFR-WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
L W+ + G + +TF ++A A GK +H IK GF+ + L
Sbjct: 243 LLYFSEMWISKVGYD---SHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTL 299
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----S 315
Y C D MR++++++ P + + +LI + G E A F R+ ++N
Sbjct: 300 ATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNK 359
Query: 316 ISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE------- 358
++ ++I G ++G V + SI++L + ++
Sbjct: 360 YTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHG 419
Query: 359 -MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
++ ++W+++I+ Y Q ++A MR+ S + C + L+QG
Sbjct: 420 ITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQG 479
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+ +HAH++ + V ++L+ MYS+CGS+ +A F+ + N+ +WTA++NGY+ H
Sbjct: 480 KQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEH 539
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEH 536
G EA+ LFE + + P+ TF+GVL+AC AG+V+ G F M + Y + P+ EH
Sbjct: 540 GYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEH 599
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
Y C++DLL R+G L EAE I+ MP D VVW LL +C +++ G A+++ LD
Sbjct: 600 YGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLD 659
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
++ L+NIYA G+W + IRK + V K+ G SW+ +N +++AF D+ +
Sbjct: 660 PNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAH 719
Query: 657 PNCNVIYATLEHLTANL 673
P I LE L+AN+
Sbjct: 720 PQSEHITTVLELLSANI 736
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 153/340 (45%), Gaps = 42/340 (12%)
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
LI + E +L N + N + NS +K GQ+ S+ +F+KM HR
Sbjct: 71 LIQQAKQE--QLAQNAYSVHNMLELNSELKQLVKQGQLCKSRYMFDKMTHR--------- 119
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLG 412
+ ++W ++I+GYV + +AL L+ M + + R + SV AC
Sbjct: 120 --------DEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGV 171
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
++ G+LLH VK+ ++V+V ++L+DMY + G I F ++ NV +WTA++
Sbjct: 172 NICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIA 231
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG--- 529
G H G EA+L F M + ++ TF L A + L++ G I G
Sbjct: 232 GLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDE 291
Query: 530 ---VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
V+ TL + + G++ ++ E +K MP D V W L++ ++ E
Sbjct: 292 SSFVINTL---ATMYNKCGKADYVMRLFEKMK-MP---DVVSWTTLITT---YVQKGEEE 341
Query: 587 RAAQKMFGLDKKPIS------AYVILSNIYAVLGKWGKKM 620
A + + K +S A VI + + KWG+++
Sbjct: 342 HAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQI 381
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 186/590 (31%), Positives = 284/590 (48%), Gaps = 85/590 (14%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T + + + CA ++ +G+Q+HC ++ G+ ++ + L+ Y+ C + +A++VFD
Sbjct: 105 THTILAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAG 164
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP---------------------------- 177
+ + W+ +L YVQ + A VF +MP
Sbjct: 165 PVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFD 224
Query: 178 ---KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP-NEYTFDSVIRACARLGA 233
+KDV WT +IS + ++ E AL LF MR GE P +E V+ ACARL
Sbjct: 225 GVERKDVFTWTAMISCFQRNGKFAE-ALALFSDMR--GEGWPVDEAVMVCVVAACARLEV 281
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
G++ HGL + G ++ ALI Y A R++D CL+
Sbjct: 282 TRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFD--SGQCLD-------- 331
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
S+NSMI GY G V D+K LF MP
Sbjct: 332 ---------------------QFSWNSMIAGYLKNGSVKDAKELFTVMP----------- 359
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
+++ V+W +MISG VQN+ +AL ++ M+ I T + AC+ + S
Sbjct: 360 ------DKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSS 413
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L+QG+ +H ++ + + V +GTSL+DMY +CG + A F ++ W A++ G
Sbjct: 414 LEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVG 473
Query: 474 YSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVV 531
+ +GL +++ +F E+ PN TF GVLSAC AGLV EG F+ M+ Y ++
Sbjct: 474 LAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHII 533
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P + HY C+VDLLGR+G++ EAE I+ MP+ D WGALL +CW + EVGER +K
Sbjct: 534 PNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHGDNEVGERVGRK 593
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
+ LD + +LSNIYA G W D+R + V K PG S +E
Sbjct: 594 LVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPGSSVVE 643
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 163/327 (49%), Gaps = 7/327 (2%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
GR G + AR +FD + + V +W M+ + + KF E+L+L S M ++E
Sbjct: 211 GRRGMVDEARKVFDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMV 270
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+++ CA+L +G+ H L ++G V + L+ Y++ + A+R+FD
Sbjct: 271 CVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCL 330
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
++ W+ M+ GY++ + DA ++F MP KD V WT +ISG ++ D +AL +F M
Sbjct: 331 DQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQN-DQSSEALTIFNNM 389
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ G P+E T SVI AC + + +GK +H + + + +G +LI+ Y C
Sbjct: 390 QAQGIK-PDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGC 448
Query: 269 FDGAMRVYDRLE---NPCLNA--SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIK 323
+ A+ V+D +E PC NA +NGL+ +E+ + N I++ ++
Sbjct: 449 LESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLS 508
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLN 350
G V++ + F+ M H+ I N
Sbjct: 509 ACRHAGLVEEGQHFFKLMQHKYHIIPN 535
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 165/391 (42%), Gaps = 53/391 (13%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ YT + ACA A EG+ VH ++ GF + + AL+ Y C A +V
Sbjct: 101 PDCYTHTILAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKV 160
Query: 276 YDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
+D P +A N+++ + ++ A +F R+ E + + +SM+ + G VD+
Sbjct: 161 FD--AGPVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDE 218
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
++++F+ + + + TW +MIS + +N +AL L+ MR
Sbjct: 219 ARKVFDGVERKDVF-----------------TWTAMISCFQRNGKFAEALALFSDMRGEG 261
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS--------- 444
+ + AC+ L + G++ H + S + V +L+ MYS
Sbjct: 262 WPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAAR 321
Query: 445 ----------------------RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+ GS+ DA+ F+ + + +WT +++G + SE
Sbjct: 322 RLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSE 381
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
A+ +F M Q I P+ T V V+SAC + +G + ++ + T+ T ++D
Sbjct: 382 ALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLID 441
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ + G L A E M E W A++
Sbjct: 442 MYMKCGCLESALEVFDTME-ERGTPCWNAVI 471
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 32/219 (14%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N I +NG + A+ LF MP + VSW TM+ G + + E+L++ + M
Sbjct: 334 SWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQG 393
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+K +E T +++S C ++SL GK +H + + Y +G+ L+ Y C +E A
Sbjct: 394 IKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESAL 453
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VFD + E W+ ++VG L+
Sbjct: 454 EVFDTMEERGTPCWNAVIVGLAMNGLVM-------------------------------- 481
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
K+L +F M S PNE TF V+ AC G EG+
Sbjct: 482 KSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQ 520
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 192/660 (29%), Positives = 332/660 (50%), Gaps = 57/660 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++G+L A +LFD+MP + VV+W T + G ++ + + + ++ + M S V N+ +
Sbjct: 82 KSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNA 141
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
L+ CA +L G+Q+H L +++G+ ++GS L+ Y+ C + A+
Sbjct: 142 ALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAE---------- 191
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+VF +M DVV +T L+S ++ + +A+ + M
Sbjct: 192 ---------------------EVFRRMEAPDVVGYTSLVSALCRNGE-LARAVDVLCQMT 229
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G PNE+T S++ C R G+ +HG ++K ALI+FY F
Sbjct: 230 RQGLQ-PNEHTMTSMLAECPR----GIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDF 284
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYN------ 319
A V++ LE+ + + S++ I GR++DA +F+ + + N +++
Sbjct: 285 GTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSAC 344
Query: 320 -SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME------RNP--VTWNSMI 370
S+ G ++ + + +++S+ + E+E NP V+W + I
Sbjct: 345 GSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAI 404
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
S QN EKA+ L + M FS +C+ L L QG+ LH +K +
Sbjct: 405 SANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCD 464
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
V G +L++MYS+CG I A+ +F + + +V +W +L++G + HG + A+ F M
Sbjct: 465 FKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEM 524
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGH 549
D P+ +TF+ VL C AGLV EG FR M YG+ PT HY C++D+LGR+G
Sbjct: 525 CSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGR 584
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
EA I++MP E D ++W LL++C N+++G+ AA K+ L ++ ++YV++SN+
Sbjct: 585 FAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNL 644
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
YA+ +W +R+R+ + VKKD G SWIE+ + V+ F D ++P+ IY L L
Sbjct: 645 YAMHEEWRDAERVRRRMDEIGVKKDAGWSWIEVKNEVNTFVAGDMSHPDSTSIYQMLAEL 704
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 141/334 (42%), Gaps = 44/334 (13%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
T I +N ++ GR+G + + ++ +VSW + + +++++L+ M
Sbjct: 364 TDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQM 423
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
H N+ FS+ LS CA L L G+Q+HCL LK G + G+ L+ Y+ C I
Sbjct: 424 HSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRI 483
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A+ FD M DV+ W LI G A+
Sbjct: 484 GSARLAFD-------------------------------VMDTHDVMSWNSLIHGLAQHG 512
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV-VHGLLIKCGFEFDES 254
D AL+ F M S + P++ TF SV+ C G EG+ + + G S
Sbjct: 513 DA-NLALETFSEMCSS-DWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPS 570
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLE-NP------CLNASNSLINGLISMGRIEDAELIF 307
+I+ F A+R+ + + P L AS L L +G++ +L+
Sbjct: 571 HYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNL-DIGKLAADKLM- 628
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
L+E +S SY M YA++ + D++R+ +M
Sbjct: 629 -ELSERDSASYVLMSNLYAMHEEWRDAERVRRRM 661
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 197/706 (27%), Positives = 333/706 (47%), Gaps = 90/706 (12%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N + G+ G L A +FD++ R VSWN+++ ++ +++ ++ M +
Sbjct: 51 NTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFE 110
Query: 82 LNETTFSTILSVCAQL---NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ T ++ C+ L + L GKQIH + G+ F + L+ YA +++A
Sbjct: 111 PSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGH-WRTFSNNALMAMYAKLGRLDDA 169
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
K + L ED +D+V W +IS ++++
Sbjct: 170 KSLL-VLFED------------------------------RDLVTWNSMISSFSQNERFM 198
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES-IGG 257
E AL R M G P+ TF SV+ AC+ L GK +H ++ + S +G
Sbjct: 199 E-ALMFLRLMVLEGVK-PDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGS 256
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF---------- 307
AL++ YC C + V+D + + + N++I G E A ++F
Sbjct: 257 ALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLY 316
Query: 308 ------------------------------NRLTEANSISYNSMIKGYAVYGQVDDSKRL 337
R E N N++I Y+ G + SKR+
Sbjct: 317 SNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRI 376
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL--YMTMRKLAID 395
F+ M R I+S NT+I+ R+ ++++ + + EK+ Y +++
Sbjct: 377 FDSMEDRDIVSWNTIITSYVICGRSS---DALLLLHEMQRIEEKSTYDGDYNDEKQVPFK 433
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
T + C+ L +L +G+ +HA+ ++ S V VG++LVDMY++CG +N A+
Sbjct: 434 PNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRV 493
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ-----DIVPNAATFVGVLSACV 510
F + NV W ++ Y HG G E++ LFE M+ + ++ P TF+ + ++C
Sbjct: 494 FDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCS 553
Query: 511 RAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV-V 568
+G+V+EG+ +F MK+ +G+ P +HY C+VDL+GR+G + EA + MP D V
Sbjct: 554 HSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGA 613
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W +LL AC + N+E+GE AA+ + L S YV+LSNIY+ G W K M++R+R+
Sbjct: 614 WSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKA 673
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+ VKK+PGCSWIE VH F D ++P ++ LE L+ L
Sbjct: 674 MGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLK 719
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 137/562 (24%), Positives = 239/562 (42%), Gaps = 88/562 (15%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N + + G+L A++L R +V+WN+M+ +S+ +F E+L + M
Sbjct: 152 SNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEG 211
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE--FVGSGLLFFYANCFEIEE 137
VK + TF+++L C+ L+ L GK+IH L++ + E FVGS L+ Y NC ++E
Sbjct: 212 VKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTD-DVIENSFVGSALVDMYCNCGQVES 270
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+ VFD + + LW+ M+ GY Q +
Sbjct: 271 GRLVFDSVLDRKIGLWNAMIAGYAQS--------------------------------EH 298
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
EKAL LF M + N T S++ A R + +HG +IK G E + +
Sbjct: 299 DEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQN 358
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT------ 311
ALI+ Y + R++D +E+ + + N++I + GR DA L+ + +
Sbjct: 359 ALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKS 418
Query: 312 --------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
+ NSI+ +++ G A + K + + S T+ S +
Sbjct: 419 TYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALV 478
Query: 358 EME------------------RNPVTWNSMISGYVQNNLHEKALQLYMTM-----RKLAI 394
+M RN +TWN +I Y + +++L+L+ M + +
Sbjct: 479 DMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEV 538
Query: 395 DRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
T TF LF +CS G + +G L H + E +VD+ R G + +A
Sbjct: 539 KPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAY 598
Query: 454 ASFSSISS--PNVAAWTALMNG---YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+++ S V AW++L+ Y + +G A + L+ D+ + + S+
Sbjct: 599 GLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENL-LQLQPDVASHYVLLSNIYSS 657
Query: 509 CVRAGLVNEGMKIFRSMKSYGV 530
AGL ++ M + R MK+ GV
Sbjct: 658 ---AGLWDKAMNLRRRMKAMGV 676
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 127/536 (23%), Positives = 217/536 (40%), Gaps = 82/536 (15%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV--GSGLLFFYANCFEIEEAKRVFD 143
F +L A + L GKQIH V K GY F V + L+ Y C + +A +VFD
Sbjct: 12 AFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFD 71
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ E +D V W +IS + + E A+K
Sbjct: 72 RITE-------------------------------RDQVSWNSIISALCR-FEEWEVAIK 99
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARL---GAFCEGKVVHGLLIKCGFEFDESIGGALI 260
FR M G P+ +T S+ AC+ L GK +HG + G + AL+
Sbjct: 100 AFRLMLMEGFE-PSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALM 157
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-----TEANS 315
Y D A + E+ L NS+I+ R +A L+F RL + +
Sbjct: 158 AMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEA-LMFLRLMVLEGVKPDG 216
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-SVIPEM--------------- 359
+++ S++ + + K + + N+ + S + +M
Sbjct: 217 VTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFD 276
Query: 360 ---ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACSCLGSLQ 415
+R WN+MI+GY Q+ EKAL L++ M A + +T S + A +
Sbjct: 277 SVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGIS 336
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+ + +H +++K E+N Y+ +L+DMYSR G I ++ F S+ ++ +W ++ Y
Sbjct: 337 RKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYV 396
Query: 476 HHGLGSEAVLLFEIM--LEQD--------------IVPNAATFVGVLSACVRAGLVNEGM 519
G S+A+LL M +E+ PN+ T + VL C + +G
Sbjct: 397 ICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGK 456
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+I + + + +VD+ + G L+ A MPI + + W ++ A
Sbjct: 457 EIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIR-NVITWNVIIMA 511
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 179/508 (35%), Positives = 276/508 (54%), Gaps = 37/508 (7%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKS-VDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
A +F +MP+++ W +I G+++S D A+ LF M PN +TF SV++A
Sbjct: 71 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKA 130
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
CA+ G +GK +HGL +K GF DE + L+ Y C G M+ + C+
Sbjct: 131 CAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVIC----GLMK------DACVLFY 180
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
++I + M +I R + + +N MI GY G ++ LF+KM RS++
Sbjct: 181 KNIIEREMVM-------MIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVV 233
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK-LAIDRTRSTFSVLFH 406
S WN+MISGY QN + A++++ M+K I T +
Sbjct: 234 S-----------------WNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLP 276
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
A S LGSL+ G+ LH + + + +G++L+DMYS+CG I A F + NV
Sbjct: 277 AVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVIT 336
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
W+A++NG++ HG +A+ F M + + P+ ++ +L+AC AGLV EG + F M
Sbjct: 337 WSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMV 396
Query: 527 SY-GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
S G+ P +EHY C+VDLLGR G L EAEEFI +MPI+ D V+W ALL AC N+E+G
Sbjct: 397 SVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKALLGACRMHRNVEMG 456
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSR 645
+R A + + AYV LSN+YA G W + ++R R+ ++++KDPGCSWI+++
Sbjct: 457 KRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMDIRKDPGCSWIDIDGV 516
Query: 646 VHAFSVEDRNNPNCNVIYATLEHLTANL 673
+H F VED ++P I + L ++ L
Sbjct: 517 LHEFLVEDDSHPRAKEINSMLVEISDKL 544
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 217/437 (49%), Gaps = 46/437 (10%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST------MHRSNVKLNETTFSTI 90
A +F+QMP R SWNT++ G+S+ DE +L++ M ++ N TF ++
Sbjct: 71 AHKIFNQMPQRNCFSWNTIIRGFSE---SDEDKALIAITLFCEMMSDEFIEPNRFTFPSV 127
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF-------- 142
L CA+ + GKQIH L LK G+ EFV S L+ Y C +++A +F
Sbjct: 128 LKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIERE 187
Query: 143 -----DELHEDNE-LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
D D E +LW++M+ GY++ A +F KM ++ VV W +ISGY+++
Sbjct: 188 MVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQN-G 246
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
+ A+++FR M++ + PN T SV+ A +RLG+ G+ +H G D+ +G
Sbjct: 247 FFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLG 306
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA--- 313
ALI+ Y C + A+ V++RL + +++ING G+ DA F ++ +A
Sbjct: 307 SALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 366
Query: 314 -NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
+ ++Y +++ + G V++ +R F +M +S++ + P +E + M+
Sbjct: 367 PSDVAYINLLTACSHAGLVEEGRRYFSQM-----VSVD---GLEPRIEH----YGCMVDL 414
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFES 431
+ L ++A + + M I + L AC +++ G+ + L+ P +S
Sbjct: 415 LGRLGLLDEAEEFILNM---PIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDS 471
Query: 432 NVYVGTSLVDMYSRCGS 448
YV +L +MY+ G+
Sbjct: 472 GAYV--ALSNMYASQGN 486
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-SNVKLNETTFS 88
R G AR LFD+M R+VVSWNTM+ GYS+ F +++ + M + +++ N T
Sbjct: 213 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLV 272
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++L ++L SL G+ +H SG + +GS L+ Y+ C IE+A VF+ L +
Sbjct: 273 SVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRE 332
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
N + WS M+ G+ DA D F KM + V
Sbjct: 333 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 365
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 189/690 (27%), Positives = 335/690 (48%), Gaps = 92/690 (13%)
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R N N T+ +++ S+ + L I ++K+G++ + + + E+
Sbjct: 5 RPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELS 64
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+A+++F+++ N + ++M+ GYV+ + +A +F M ++ V WT LI GY++ ++
Sbjct: 65 QARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQ-LN 123
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
++A +LF M+ G P+ TF +++ C + V +IK G++ +G
Sbjct: 124 QFKEAFELFVQMQRCGTE-PDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVG 182
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENP---------CLN---------------------- 285
L++ YC D A +++ + C N
Sbjct: 183 NTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFV 242
Query: 286 ----ASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
SN+L++ + DA +F+ + E + +SYN +I GYA G+ + LF ++
Sbjct: 243 WNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFREL 302
Query: 342 P----HRSIISLNTMISVI----------------------------------------- 356
R TM+S+
Sbjct: 303 QFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKF 362
Query: 357 --PEM------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
EM R+ V W +MIS YVQ +E+ LQL+ MR+ ++ ++TF+ L A
Sbjct: 363 EEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRAS 422
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ + SL G+ LH+ ++K+ F SNV+ G++L+D+Y++CGSI DA +F + N+ +W
Sbjct: 423 ASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWN 482
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS- 527
A+++ Y+ +G + F+ M+ + P++ +F+GVLSAC +GLV EG+ F SM
Sbjct: 483 AMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQI 542
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
Y + P EHY VVD+L RSG +EAE+ + +MPI+ D ++W ++L+AC N E+ R
Sbjct: 543 YKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARR 602
Query: 588 AAQKMFGLDK-KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
AA ++F +++ + + YV +SNIYA G+W + K + VKK P SW+E+
Sbjct: 603 AADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHET 662
Query: 647 HAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
H FS DR +P I ++ LT + +
Sbjct: 663 HMFSANDRCHPQIEEIRKKIDMLTKTMEEL 692
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 138/580 (23%), Positives = 250/580 (43%), Gaps = 79/580 (13%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VSTN I+ ++G L AR LFD M RT V+W ++ GYS+ +F E+ L M R
Sbjct: 79 VSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRC 138
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ + TF T+LS C Q+ ++K GY+ VG+ L+ Y ++ A
Sbjct: 139 GTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLA 198
Query: 139 KRVFDELHEDNELLWSLMLVG-----------------------------------YVQC 163
++F E+ E + ++ +L Y +
Sbjct: 199 CQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKH 258
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFD 222
+ + DA +F +MP++D V + +ISGYA DG K A LFR ++ + + ++ F
Sbjct: 259 DSVIDARKLFDEMPEQDGVSYNVIISGYA--WDGKHKYAFDLFRELQFTAFDR-KQFPFA 315
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
+++ + + G+ +H I + + +G +L++ Y C F+ A ++ L +
Sbjct: 316 TMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHR 375
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEANSI----SYNSMIKGYAVYGQVDDSKRLF 338
++I+ + G E+ +FN++ +A+ I ++ S+++ A + K+L
Sbjct: 376 SAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQL- 434
Query: 339 EKMPHRSII----------------------SLNTMISVIPEM-ERNPVTWNSMISGYVQ 375
H II S+ + EM +RN V+WN+MIS Y Q
Sbjct: 435 ----HSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQ 490
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH----AHLVKTPFES 431
N E L+ + M + +F + ACS G +++G L H + K
Sbjct: 491 NGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEG-LWHFNSMTQIYKLDPRR 549
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
Y S+VDM R G N+A+ + + P+ W++++N H A + +
Sbjct: 550 EHYA--SVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQL 607
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
+ + +AA +V + + AG K+ ++M+ GV
Sbjct: 608 FNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGV 647
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 158/354 (44%), Gaps = 48/354 (13%)
Query: 7 QSQTLMTQ-ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKF 65
+QT++T ++ I+ N + + G+ A +F + R+ V W M+ Y + +
Sbjct: 334 HAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFY 393
Query: 66 DESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
+E L L + M +++V ++ TF+++L A + SL GKQ+H ++KSG+ F GS L
Sbjct: 394 EEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSAL 453
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
L YA C I++A + F E+ + N + W+ M+ Y Q
Sbjct: 454 LDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQ----------------------- 490
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
+G A E LK F+ M SG P+ +F V+ AC+ G EG + H +
Sbjct: 491 ---NGEA------EATLKSFKEMVLSGLQ-PDSVSFLGVLSACSHSGLVEEG-LWHFNSM 539
Query: 246 KCGFEFDESIG--GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED- 302
++ D ++++ C F+ A ++ + ++ + + +++ RI
Sbjct: 540 TQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMP---IDPDEIMWSSVLNACRIHKN 596
Query: 303 -------AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
A+ +FN ++ Y +M YA GQ ++ ++ + M R + L
Sbjct: 597 QELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKL 650
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 204/671 (30%), Positives = 324/671 (48%), Gaps = 61/671 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G+ A +F +MP R V SWN M+ GY K +E+L L M + V+ + TF
Sbjct: 141 RFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPC 200
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C + G+++H VL+ G+ V + L+ YA C ++ A++VFD
Sbjct: 201 VLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFD------ 254
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
M D + W +I+G+ ++ + C L+LF M
Sbjct: 255 -------------------------SMAVMDCISWNAMIAGHFENGE-CNAGLELFLTML 288
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+ E PN T SV A L K +HGL +K GF D + +LI+ Y
Sbjct: 289 QD-EVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMM 347
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI-----KG 324
A V+ R++ + ++I+G G D L L E N++S + +
Sbjct: 348 GQARTVFSRMDTRDAMSWTAMISGYEKNG-FPDKALEVYALMEVNNVSPDDITIASALAA 406
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTW 366
A G +D +L E + +S + + + EM E++ V+W
Sbjct: 407 CACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSW 466
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHAHLV 425
+SMI+G+ N+ + +AL + M LA + S TF AC+ G+L+ G+ +HAH++
Sbjct: 467 SSMIAGFCFNHRNFEALYYFRHM--LADVKPNSVTFIAALAACAATGALRSGKEIHAHVL 524
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ Y+ +L+D+Y +CG A A F + + +V +W ++ G+ HG G A+
Sbjct: 525 RCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALS 584
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
F M++ P+ TFV +L AC R G+V+EG ++F SM Y +VP L+HY C+VDLL
Sbjct: 585 FFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLL 644
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
R G L EA FI +MPI DA VWGALL+ C ++E+GE AA+ + L+ +V
Sbjct: 645 SRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHV 704
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+L ++YA G W K +RK + + D GCSW+E+ VHAF +D ++P I
Sbjct: 705 LLCDLYADAGIWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINT 764
Query: 665 TLEHLTANLNS 675
LE + + +
Sbjct: 765 VLEGIYERMKA 775
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 185/425 (43%), Gaps = 70/425 (16%)
Query: 129 YANCFEIEEAKRVFDE-----LHEDNELLWSLMLVGYVQCNLMS------DAFDVFIKMP 177
Y F + E +R + H D+ W + +G +++ A+ VF KMP
Sbjct: 97 YVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMP 156
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
++DV W ++ GY K+ E+AL L+ M +G P+ YTF V+R+C + + G
Sbjct: 157 ERDVFSWNVMVGGYGKA-GLLEEALDLYHRMMWAGVR-PDVYTFPCVLRSCGGVPDWRMG 214
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
+ VH +++ GF + + AL+ Y C A +V+D + + N++I G
Sbjct: 215 REVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFEN 274
Query: 298 GRIEDA-ELIFNRLTE-------------------------------------ANSISY- 318
G EL L + A +++
Sbjct: 275 GECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFC 334
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
NS+I+ YA G + ++ +F +M R+ ++W +MISGY +N
Sbjct: 335 NSLIQMYASLGMMGQARTVFSRMD-----------------TRDAMSWTAMISGYEKNGF 377
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+KAL++Y M + T + AC+CLGSL G LH F S V V +
Sbjct: 378 PDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNA 437
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L++MY++ I+ A F + +V +W++++ G+ + EA+ F ML D+ PN
Sbjct: 438 LLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPN 496
Query: 499 AATFV 503
+ TF+
Sbjct: 497 SVTFI 501
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 121/265 (45%), Gaps = 34/265 (12%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N+M+ +G+ + R+F KMP R + S WN M+ GY + L
Sbjct: 133 NAMLSMLVRFGETWHAWRVFAKMPERDVFS-----------------WNVMVGGYGKAGL 175
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
E+AL LY M + TF + +C + + G+ +HAH+++ F V V +
Sbjct: 176 LEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNA 235
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+ MY++CG + A+ F S++ + +W A++ G+ +G + + LF ML+ ++ PN
Sbjct: 236 LMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPN 295
Query: 499 AATFVGVLSACVRAGLVNE--------GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
T + S V +GL+++ G+ + R G + ++ + G +
Sbjct: 296 LMT---ITSVTVASGLLSDITFAKEMHGLAVKR-----GFATDVAFCNSLIQMYASLGMM 347
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
+A M DA+ W A++S
Sbjct: 348 GQARTVFSRMDTR-DAMSWTAMISG 371
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/502 (20%), Positives = 203/502 (40%), Gaps = 97/502 (19%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T + G +V AR +FD M + +SWN M+ G+ + + + L L TM + V+
Sbjct: 234 NALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQ 293
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
N T +++ L+ + K++H L +K G+ + L+ YA+ + +A+ V
Sbjct: 294 PNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTV 353
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD--------------------- 180
F + + + W+ M+ GY + A +V+ M +
Sbjct: 354 FSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSL 413
Query: 181 ------------------VVVWTKLISGYAKSVDGCEKALKLFRWMRES----------- 211
VVV L+ YAKS +KA+++F+ M E
Sbjct: 414 DVGVKLHELAESKGFMSYVVVTNALLEMYAKS-KRIDKAIEVFKCMPEKDVVSWSSMIAG 472
Query: 212 ------------------GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ PN TF + + ACA GA GK +H +++CG ++
Sbjct: 473 FCFNHRNFEALYYFRHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEG 532
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE- 312
+ ALI+ Y C A + + + N +I G ++ G E A FN++ +
Sbjct: 533 YLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKI 592
Query: 313 ---ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ +++ +++ + G V + LF M + S++P ++ + M
Sbjct: 593 GECPDEVTFVALLCACSRGGMVSEGWELFHSMTDK--------YSIVPNLKH----YACM 640
Query: 370 ISGYVQNNLHEKALQL---YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+ +L + QL Y + ++ I + + L + C ++ G+L ++++
Sbjct: 641 V------DLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLE 694
Query: 427 -TPFESNVYVGTSLVDMYSRCG 447
P ++ +V L D+Y+ G
Sbjct: 695 LEPNDAGYHV--LLCDLYADAG 714
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 34/222 (15%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
+ +V TN + ++ ++ A +F MP + VVSW++M+ G+ + E+L M
Sbjct: 430 SYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM 489
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
++VK N TF L+ CA +L GK+IH VL+ G ++ + L+ Y C +
Sbjct: 490 -LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQT 548
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A F + + W++M+ G+V +
Sbjct: 549 GYAWAQFCAHGAKDVVSWNIMIAGFV--------------------------------AH 576
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
E AL F M + GE P+E TF +++ AC+R G EG
Sbjct: 577 GNGETALSFFNQMVKIGE-CPDEVTFVALLCACSRGGMVSEG 617
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 80/197 (40%), Gaps = 1/197 (0%)
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
H + Q + A + LF C +++ G AH + +G +
Sbjct: 75 HGQLAQALWLLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNA 134
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
++ M R G A F+ + +V +W ++ GY GL EA+ L+ M+ + P+
Sbjct: 135 MLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPD 194
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
TF VL +C G ++ + +G ++ ++ + + G + A +
Sbjct: 195 VYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFD 254
Query: 559 DMPIELDAVVWGALLSA 575
M + +D + W A+++
Sbjct: 255 SMAV-MDCISWNAMIAG 270
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 186/590 (31%), Positives = 284/590 (48%), Gaps = 85/590 (14%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T + + + CA ++ +G+Q+HC ++ G+ ++ + L+ Y+ C + +A++VFD
Sbjct: 105 THTILAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAG 164
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP---------------------------- 177
+ + W+ +L YVQ + A VF +MP
Sbjct: 165 PVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFD 224
Query: 178 ---KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP-NEYTFDSVIRACARLGA 233
+KDV WT +IS + ++ E AL LF MR GE P +E V+ ACARL
Sbjct: 225 VVERKDVFTWTAMISCFQRNGKFAE-ALALFSDMR--GEGWPVDEAVMVCVVAACARLEV 281
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
G++ HGL + G ++ ALI Y A R++D CL+
Sbjct: 282 TRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFD--SGQCLD-------- 331
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
S+NSMI GY G V D+K LF MP
Sbjct: 332 ---------------------QFSWNSMIAGYLKNGSVKDAKELFTVMP----------- 359
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
+++ V+W +MISG VQN+ +AL ++ M+ I T + AC+ + S
Sbjct: 360 ------DKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSS 413
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L+QG+ +H ++ + + V +GTSL+DMY +CG + A F ++ W A++ G
Sbjct: 414 LEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVG 473
Query: 474 YSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVV 531
+ +GL +++ +F E+ PN TF GVLSAC AGLV EG F+ M+ Y ++
Sbjct: 474 LAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHII 533
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P + HY C+VDLLGR+G++ EAE I+ MP+ D WGALL +CW + EVGER +K
Sbjct: 534 PNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHGDNEVGERVGRK 593
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
+ LD + +LSNIYA G W D+R + V K PG S +E
Sbjct: 594 LVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPGSSVVE 643
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 163/327 (49%), Gaps = 7/327 (2%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
GR G + AR +FD + + V +W M+ + + KF E+L+L S M ++E
Sbjct: 211 GRRGMVDEARKVFDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMV 270
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+++ CA+L +G+ H L ++G V + L+ Y++ + A+R+FD
Sbjct: 271 CVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCL 330
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
++ W+ M+ GY++ + DA ++F MP KD V WT +ISG ++ D +AL +F M
Sbjct: 331 DQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQN-DQSSEALTIFNNM 389
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ G P+E T SVI AC + + +GK +H + + + +G +LI+ Y C
Sbjct: 390 QAQGIK-PDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGC 448
Query: 269 FDGAMRVYDRLE---NPCLNA--SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIK 323
+ A+ V+D +E PC NA +NGL+ +E+ + N I++ ++
Sbjct: 449 LESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLS 508
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLN 350
G V++ + F+ M H+ I N
Sbjct: 509 ACRHAGLVEEGQHFFKLMQHKYHIIPN 535
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 165/391 (42%), Gaps = 53/391 (13%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ YT + ACA A EG+ VH ++ GF + + AL+ Y C A +V
Sbjct: 101 PDCYTHTILAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKV 160
Query: 276 YDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
+D P +A N+++ + ++ A +F R+ E + + +SM+ + G VD+
Sbjct: 161 FD--AGPVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDE 218
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
++++F+ + + + TW +MIS + +N +AL L+ MR
Sbjct: 219 ARKVFDVVERKDVF-----------------TWTAMISCFQRNGKFAEALALFSDMRGEG 261
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS--------- 444
+ + AC+ L + G++ H + S + V +L+ MYS
Sbjct: 262 WPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAAR 321
Query: 445 ----------------------RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+ GS+ DA+ F+ + + +WT +++G + SE
Sbjct: 322 RLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSE 381
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
A+ +F M Q I P+ T V V+SAC + +G + ++ + T+ T ++D
Sbjct: 382 ALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLID 441
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ + G L A E M E W A++
Sbjct: 442 MYMKCGCLESALEVFDTME-ERGTPCWNAVI 471
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 32/219 (14%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N I +NG + A+ LF MP + VSW TM+ G + + E+L++ + M
Sbjct: 334 SWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQG 393
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+K +E T +++S C ++SL GK +H + + Y +G+ L+ Y C +E A
Sbjct: 394 IKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESAL 453
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
VFD + E W+ ++VG L+
Sbjct: 454 EVFDTMEERGTPCWNAVIVGLAMNGLVM-------------------------------- 481
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
K+L +F M S PNE TF V+ AC G EG+
Sbjct: 482 KSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQ 520
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 194/662 (29%), Positives = 327/662 (49%), Gaps = 54/662 (8%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
+V R +F+ MP R VV+W ++L GY + + + L M V N TF+++LSV
Sbjct: 155 VVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSV 214
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
A + G+++H +K G FV + L+ YA C +EEA RV
Sbjct: 215 VASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEA-RV------------ 261
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
VF M +D+V W L++G + E AL+LF R S
Sbjct: 262 ------------------VFCGMETRDMVSWNTLMAGLVLNGHDLE-ALQLFHDSRSS-I 301
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
M + T+ +VI+ CA + + +H ++K GF ++ AL++ Y A+
Sbjct: 302 TMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNAL 361
Query: 274 RVYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA-- 326
++ + S ++ING I G + A +F+R+ E N +Y++++
Sbjct: 362 DIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVAS 421
Query: 327 ----VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------ERNPVTWNSMISGYV 374
++ QV + + ++++ + + E +++ V+W++M++ Y
Sbjct: 422 LPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYA 481
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC-SCLGSLQQGQLLHAHLVKTPFESNV 433
Q + A +++ M + T S + AC S + G+ HA +K +
Sbjct: 482 QAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDAL 541
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
V ++LV MY+R GSI AQ F + ++ +W ++++GY+ HG +A+ +F M +
Sbjct: 542 CVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAE 601
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHE 552
I + TF+ V+ C AGLV EG + F SM + YG+ PT+EHY C+VDL R+G L E
Sbjct: 602 GIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDE 661
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A I+ M +VW LL AC N+E+G+ AA+K+ L+ + YV+LSNIY+
Sbjct: 662 AMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSA 721
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTAN 672
GKW +K ++RK + +VKK+ GCSWI++ ++VH+F D+++P IYA L +T
Sbjct: 722 AGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTK 781
Query: 673 LN 674
L
Sbjct: 782 LK 783
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 131/568 (23%), Positives = 244/568 (42%), Gaps = 72/568 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV-KLNETTFSTILSVCA 95
AR FD++P R + + L +++ ++L +HR + ++ +L VC
Sbjct: 57 ARQAFDEIPHRNTL--DHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
+ + GKQ+H L ++ G++ + VG+ L+ Y + + ++VF+ + + N + W+
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWT 174
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN 214
+L GY+Q +SD ++F +M + VW
Sbjct: 175 SLLTGYIQDGALSDVMELFFRMRAEG--VW------------------------------ 202
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
PN TF SV+ A G G+ VH +K G + +L+ Y C + A
Sbjct: 203 -PNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARV 261
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFN----RLTEANSISYNSMIKGYAVYGQ 330
V+ +E + + N+L+ GL+ G +A +F+ +T +Y ++IK A Q
Sbjct: 262 VFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQ 321
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEM-------------------ERNPVTWNSMIS 371
+ +++L + R S +++ + + +N V+W +MI+
Sbjct: 322 LGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMIN 381
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
G +QN A L+ MR+ + T+S + A + SL +HA ++KT +E
Sbjct: 382 GCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA--SVASLPPQ--IHAQVIKTNYEC 437
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
VGT+L+ YS+ + +A + F I +V +W+A++ Y+ G A +F M
Sbjct: 438 TSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMT 497
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRS 547
+ PN T V+ AC G+ + R + + CV V + R
Sbjct: 498 MHGLKPNEFTISSVIDACASP---TAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARK 554
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + E+ + I + + D V W ++LS
Sbjct: 555 GSI-ESAQCIFERQTDRDLVSWNSMLSG 581
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 208/476 (43%), Gaps = 71/476 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +F M R +VSWNT++ G E+L L S L ++T++T++
Sbjct: 254 GLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVI 313
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+CA + L +Q+H VLK G+ + V + L+ Y+ +
Sbjct: 314 KLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQ----------------- 356
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ +A D+F+ M ++VV WT +I+G ++ D A LF MRE
Sbjct: 357 --------------LGNALDIFLLMSGSQNVVSWTAMINGCIQNGD-VPLAAALFSRMRE 401
Query: 211 SGENMPNEYTFDSVIRA-CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G PN++T+ +++ A A L +H +IK +E +G AL+ Y
Sbjct: 402 DGV-APNDFTYSTILTASVASL-----PPQIHAQVIKTNYECTSIVGTALLASYSKLCNT 455
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGY 325
+ A+ ++ ++ + + ++++ G + A IF ++T + N + +S+I
Sbjct: 456 EEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDAC 515
Query: 326 AVYGQVDDSKRLFEKMP-----HRSIISLNTMISVIP--------------EMERNPVTW 366
A D R F + H ++ + ++S+ + +R+ V+W
Sbjct: 516 ASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSW 575
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
NSM+SGY Q+ +KAL ++ M I+ TF + C+ G +++GQ + +
Sbjct: 576 NSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMAR 635
Query: 427 ----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWTALMNGYSHH 477
TP + +VD+YSR G +++A + +S P W L+ H
Sbjct: 636 DYGITPTMEHY---ACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVH 688
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 44/77 (57%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
R G + +A+ +F++ R +VSWN+ML GY++ ++L + M ++++ TF
Sbjct: 552 ARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFL 611
Query: 89 TILSVCAQLNSLIDGKQ 105
+++ CA + +G++
Sbjct: 612 SVIMGCAHAGLVEEGQR 628
>gi|224080303|ref|XP_002306089.1| predicted protein [Populus trichocarpa]
gi|222849053|gb|EEE86600.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 199/668 (29%), Positives = 341/668 (51%), Gaps = 62/668 (9%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDE-SLSLVSTMH-- 76
S N I+ ++ L A+++FD +R +V++N+ML GY ++ +L L M
Sbjct: 56 SWNTIISAHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSI 115
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R+ +++++ T ++++++ ++L + G+Q+H ++K+G + FV S L+ Y+ C +
Sbjct: 116 RNEIEIDDLTITSMVNLFSKLCNSCYGRQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCFK 175
Query: 137 EAKRVFDELHED---NELLWSLMLVGYVQCNLMSDAFDVFIKMPK-KDVVVWTKLISGYA 192
EA +VF + + + + M+ Y + M A +F + + D V W LISGY
Sbjct: 176 EACQVFKGCEREGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYV 235
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
++ E ALKLF M E+G NE+TF SV+ ACA L GK +H ++K G
Sbjct: 236 QNGYPVE-ALKLFVCMGENGVKW-NEHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSS 293
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+ +++ YC C G ++ AE +
Sbjct: 294 AFVESGIVDVYCKC-------------------------------GNMKYAESLLLTRGV 322
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
+S S SMI G++ G + ++ RLF+ + E+N + W ++ SG
Sbjct: 323 RSSFSITSMIVGFSSQGNMVEACRLFDSLE-----------------EKNSIVWAALFSG 365
Query: 373 YVQNNLHEKALQLY--MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
YV+ E +L ++ AI S F+ C+ +L G+ +H ++ + E
Sbjct: 366 YVKLKQCEAFFELLREYIAKEAAIPDALILISA-FNVCAFQAALGPGKQIHGYVFRMGIE 424
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
++ T+++DMYS+CGSI A+ F + ++ + ++ GY+HHG +A+ LF+ M
Sbjct: 425 MDMKTTTAMIDMYSKCGSIPYAEKLFLKVIERDLVLYNVMLAGYAHHGHEIKAINLFQEM 484
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGH 549
LE+ + P+A TFV +LSAC GLV+ G K F SM + Y ++P +HY C++DL GR+
Sbjct: 485 LERGVGPDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMIDLYGRASQ 544
Query: 550 LHEAEEFIKDMPIE-LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L + F++ +P+E DA V GA +AC N E+ + A +K+ ++ + YV L+N
Sbjct: 545 LEKMVLFMQRIPMEHQDAAVVGAFFNACRLNNNTELAKEAEEKLLNIEGDSGARYVQLAN 604
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YA G W + IR+ + E KK GCSW+ L++ VH+F+ DR + IY+ LE
Sbjct: 605 VYAAEGNWAEMGRIRREMRGKEAKKFAGCSWVYLDNEVHSFTSGDRTHTKAESIYSMLEF 664
Query: 669 LTANLNSV 676
L A L +
Sbjct: 665 LMAELYEI 672
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 226/519 (43%), Gaps = 92/519 (17%)
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ SL DG H +KSG+ + L+ Y+ I EA+++FDE+ + N W+ +
Sbjct: 1 MRSLKDGLMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTI 60
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRE-SGEN 214
+ +++ ++ A +F +D+V + ++SGY SVDG E+ AL+LF M+ E
Sbjct: 61 ISAHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYV-SVDGYERNALELFVEMQSIRNEI 119
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
++ T S++ ++L C G+ +H ++K G + + +LI+ Y C F A +
Sbjct: 120 EIDDLTITSMVNLFSKLCNSCYGRQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCFKEACQ 179
Query: 275 VYDRLENPC---LNASNSLINGLISMGRIEDAELIFNRLTEAN-SISYNSMIKGYAVYGQ 330
V+ E L + N+++ G +E A +F R +E N S+S+N++I GY G
Sbjct: 180 VFKGCEREGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQNGY 239
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
++ +LF M N V WN
Sbjct: 240 PVEALKLFVCMG------------------ENGVKWN----------------------- 258
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
TF + AC+ L +L+ G+ +HA ++K S+ +V + +VD+Y +CG++
Sbjct: 259 -------EHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSSAFVESGIVDVYCKCGNMK 311
Query: 451 DAQA-------------------------------SFSSISSPNVAAWTALMNGYSHHGL 479
A++ F S+ N W AL +GY
Sbjct: 312 YAESLLLTRGVRSSFSITSMIVGFSSQGNMVEACRLFDSLEEKNSIVWAALFSGYVKLK- 370
Query: 480 GSEAV--LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
EA LL E + ++ +P+A + + C + G +I + G+ ++
Sbjct: 371 QCEAFFELLREYIAKEAAIPDALILISAFNVCAFQAALGPGKQIHGYVFRMGIEMDMKTT 430
Query: 538 TCVVDLLGRSGHLHEAEE-FIKDMPIELDAVVWGALLSA 575
T ++D+ + G + AE+ F+K IE D V++ +L+
Sbjct: 431 TAMIDMYSKCGSIPYAEKLFLK--VIERDLVLYNVMLAG 467
>gi|297794367|ref|XP_002865068.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
gi|297310903|gb|EFH41327.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
Length = 659
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 194/646 (30%), Positives = 316/646 (48%), Gaps = 65/646 (10%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFSTILSVCA 95
AR+LFDQMP R +VSW ++ GY A E+L+L S + V + + S L C
Sbjct: 39 ARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKACG 98
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
Q +++ G+ +H K+ FVG+ LL Y +I++ R+F E
Sbjct: 99 QSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTE----------- 147
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
M ++ V WT ++SG ++ E L F M S + +
Sbjct: 148 --------------------MQFRNTVTWTAIVSGMVEAGRHKE-GLTYFSEMSRS-KGL 185
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+++ F + ++ACARL GK +H +I G + + +LI Y C + +
Sbjct: 186 SDDFAFATALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHL 245
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAEL------IFNRLTE------ANSISY-NSMI 322
++ + + + +LI+ MG+ E A IF R ++ +S+S NSM+
Sbjct: 246 FESMSERDVFSWTTLIDAYSQMGQEEKAVATFLKIEIFRRTSQWTYFCLGDSLSVSNSMM 305
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
K Y+ G++D + LF+ M R II TW+++I GY Q L E+
Sbjct: 306 KMYSTCGKLDSASVLFQGMRRRDII-----------------TWSTIIGGYSQAGLGEEV 348
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
+ MR+ T + L + L+QG+ +HA + E N + ++L++M
Sbjct: 349 FMCFSWMRQAGPKPTDPALASLLSVSGTMAVLEQGRQVHALALYLGLEQNSTIRSALINM 408
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
YS+CGSI +A F + ++ + TA++NGY+ HG EA+ LFE L+ + P+ TF
Sbjct: 409 YSKCGSIEEASKIFEETDTDDIVSLTAMINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTF 468
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+ VL+AC +G ++ G + F M+ Y + P EHY C+VDLL R+G L +AE+ I +MP
Sbjct: 469 ISVLTACSHSGQLDLGFRYFNLMQDEYNIRPVKEHYGCMVDLLCRAGRLSDAEKMINEMP 528
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
+ D VVW LL+AC + E G RAA+++ LD +A+V L+NIY+ GK +
Sbjct: 529 WKKDDVVWTTLLNACKAKGDTERGRRAAERILELDPTSETAFVTLANIYSSTGKLEEAAH 588
Query: 622 IRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
+RK + V K PG S I++ R F +++ IY+ L+
Sbjct: 589 VRKAMKSKGVIKVPGWSSIKIMDRASTFVSGSQSHSQSEDIYSILD 634
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/495 (20%), Positives = 206/495 (41%), Gaps = 75/495 (15%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G++ +F +M R V+W ++ G + + E L+ S M RS ++ F+T
Sbjct: 134 RTGKIDKGCRIFTEMQFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFAT 193
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
L CA+L + GK+IH V+ G + V + L+ Y C E+ + +F+ + E +
Sbjct: 194 ALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFESMSERD 253
Query: 150 ELLWSLMLVGYVQ--------------------------------------------CNL 165
W+ ++ Y Q C
Sbjct: 254 VFSWTTLIDAYSQMGQEEKAVATFLKIEIFRRTSQWTYFCLGDSLSVSNSMMKMYSTCGK 313
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
+ A +F M ++D++ W+ +I GY+++ G E+ F WMR++G P + S++
Sbjct: 314 LDSASVLFQGMRRRDIITWSTIIGGYSQAGLG-EEVFMCFSWMRQAGPK-PTDPALASLL 371
Query: 226 RACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN 285
+ +G+ VH L + G E + +I ALI Y C + + A ++++ + +
Sbjct: 372 SVSGTMAVLEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTDDIV 431
Query: 286 ASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ ++ING G ++A +F + + +++++ S++ + GQ+D R F M
Sbjct: 432 SLTAMINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHSGQLDLGFRYFNLM 491
Query: 342 PHRSIISLNTMISVIPEMERNPVT--WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
E PV + M+ + A ++ + ++ +
Sbjct: 492 Q--------------DEYNIRPVKEHYGCMVDLLCRAGRLSDAEKM---INEMPWKKDDV 534
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGSINDA---QAS 455
++ L +AC G ++G+ +++ P +V +L ++YS G + +A + +
Sbjct: 535 VWTTLLNACKAKGDTERGRRAAERILELDPTSETAFV--TLANIYSSTGKLEEAAHVRKA 592
Query: 456 FSSISSPNVAAWTAL 470
S V W+++
Sbjct: 593 MKSKGVIKVPGWSSI 607
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 192/648 (29%), Positives = 309/648 (47%), Gaps = 91/648 (14%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST-MHRSNVKLNETTFS 88
R GQ+ A LF M R +VSWN ++ GY+ ++ ++L L S + +K + T
Sbjct: 233 RIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLV 292
Query: 89 TILSVCAQLNSLIDGKQIHCLVLK-SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
++L CA +++L K IH +++ G VG+ LL FYA
Sbjct: 293 SVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYA----------------- 335
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL-KLFR 206
+CN A F+ + +KD++ W ++ + +S GCE L L
Sbjct: 336 --------------KCNYTQAALQTFLMISRKDLISWNAILDAFTES--GCETHLVNLLH 379
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF---EFDESIGGALIEFY 263
WM G P+ T ++I+ A + + K H I+ G + ++G +++ Y
Sbjct: 380 WMLREGIR-PDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAY 438
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-NSISYNSMI 322
C G ++ A IF L+E N ++ NSMI
Sbjct: 439 AKC-------------------------------GNMKYAVNIFGSLSEKRNVVTCNSMI 467
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
GY DD+ +F M E + TWN M+ Y +N+ ++A
Sbjct: 468 SGYVNSSSHDDAYAIFNTMS-----------------ETDLTTWNLMVRVYAENDFPDQA 510
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L L+ ++ + T + AC+ + S+ + H ++++ F ++V + + +DM
Sbjct: 511 LSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF-NDVRLNGAFIDM 569
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
YS+CGS+ A F S ++ +TA++ G++ HG+G EA+ +F MLE + P+
Sbjct: 570 YSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVII 629
Query: 503 VGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
VL AC AGLV+EG KIF S+ K +G PT+E Y CVVDLL R G + +A F+ MP
Sbjct: 630 TAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMP 689
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMD 621
IE +A +WG LL AC +E+G A +F ++ I YV++SN+YA +W M+
Sbjct: 690 IEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVME 749
Query: 622 IRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
IR+ + E+KK GCSWIE+ R + F D ++P ++IY TL L
Sbjct: 750 IRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQRSIIYRTLSTL 797
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 204/483 (42%), Gaps = 114/483 (23%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-ESLSLVSTMHRSN-VKLNETT 86
++G L LF +M R V WN +L G + + + E + L MH N K N T
Sbjct: 24 AKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVT 83
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+ +L VCA+L GK +H V+KSG E G+ L+ YA C
Sbjct: 84 IAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKC-------------- 128
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
G V SDA+ F ++ KDVV W +I+G++++ E+A KLF
Sbjct: 129 ------------GLV----CSDAYAAFNRIEFKDVVSWNAVIAGFSEN-KFTEEAFKLFH 171
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M + G PN T S++ CA L +E+ G + G
Sbjct: 172 AMLK-GPIQPNYATIASILPVCASL--------------------EENAG-----YRYGK 205
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
E +R + +E+ ++ NSL++ + +G++E AE +F + + +S+N++I GYA
Sbjct: 206 EVHCHVLRRMELVED--VSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYA 263
Query: 327 VYGQVDDSKRLFEKMPHRSIISLN--TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
G+ + LF + I + T++SV+P
Sbjct: 264 SNGEWLKALELFSEFISLETIKPDSVTLVSVLP--------------------------- 296
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP-FESNVYVGTSLVDMY 443
AC+ + +LQ + +H ++++ P + VG +L+ Y
Sbjct: 297 ----------------------ACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFY 334
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++C A +F IS ++ +W A+++ ++ G + V L ML + I P++ T +
Sbjct: 335 AKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITIL 394
Query: 504 GVL 506
++
Sbjct: 395 TII 397
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 38/282 (13%)
Query: 309 RLTEANSISYNSMIKG----YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV 364
+L +S Y+S+ KG YA G +D +LF +M +R+PV
Sbjct: 3 KLCPFSSKGYDSLCKGLLNLYAKSGALDYCNKLFGEMD-----------------QRDPV 45
Query: 365 TWNSMISGYVQNNLHE-KALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHA 422
WN ++SG HE + ++L+ M + + S T +++ C+ L G+ +H+
Sbjct: 46 IWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHS 104
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSI-NDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
+++K+ ES+ G +L+ MY++CG + +DA A+F+ I +V +W A++ G+S +
Sbjct: 105 YVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTE 164
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK--------IFRSMKSYGVVPT 533
EA LF ML+ I PN AT +L C N G + + R M+ +V
Sbjct: 165 EAFKLFHAMLKGPIQPNYATIASILPVCASLE-ENAGYRYGKEVHCHVLRRME---LVED 220
Query: 534 LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ ++ R G + +AE ++M D V W A+++
Sbjct: 221 VSVINSLMSFYLRIGQMEKAEFLFRNMK-SRDLVSWNAIIAG 261
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
YA ++++ +V+ N I+ + A +F+ M + +WN M+ Y++
Sbjct: 446 YAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAEND 505
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS 123
D++LSL + +K + T +IL CA + S+ +Q H V+++
Sbjct: 506 FPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRA---------- 555
Query: 124 GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
CF F ++ Y +C + A+ +F+ P+KD+V+
Sbjct: 556 --------CFNDVRLNGAFIDM--------------YSKCGSVFGAYKLFLSSPQKDLVM 593
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+T ++ G+A G E+AL++F +M E G P+ +V+ AC+ G EG
Sbjct: 594 FTAMVGGFAMHGMG-EEALRIFSYMLELGVK-PDHVIITAVLFACSHAGLVDEG 645
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 187/646 (28%), Positives = 318/646 (49%), Gaps = 57/646 (8%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V +N I + G++ A +FDQM ++ +SW TM+ GY + E L L+ M R
Sbjct: 263 VVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRK 322
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
++K+N+ + + + L GK++H L+ G V + ++ YA C E+++A
Sbjct: 323 HIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKA 382
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
K F L + ++WS L VQ +GY
Sbjct: 383 KEFFLSLEGRDLVVWSAFLSALVQ--------------------------AGYPG----- 411
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+AL +F+ M+ G P++ S++ ACA + + GK++H +IK D S+
Sbjct: 412 -EALSIFQEMQHEGLK-PDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATT 469
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEAN 314
L+ Y C++F AM +++R+ + A N+LING G A +F RL + +
Sbjct: 470 LVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPD 529
Query: 315 SISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME---- 360
S + S++ G +G + + E ++I + + E
Sbjct: 530 SGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFH 589
Query: 361 -----RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ V+WN MI+GY+ N +A+ + M+ ++ TF + A S L L+
Sbjct: 590 LNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILR 649
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+ HA +++ F S+ +G SL+DMY++ G ++ ++ F + + +W A+++GY+
Sbjct: 650 EAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYA 709
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTL 534
HG G A+ LF +M E + ++ +++ VLSAC AGL+ EG IF+SM + + + P++
Sbjct: 710 MHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSM 769
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY C+VDLLG +G E I MP E DA VWGALL AC N+++GE A +
Sbjct: 770 EHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLK 829
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWI 640
L+ + Y++LS+IYA G+W R +T +KK+PG SW+
Sbjct: 830 LEPRNAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWV 875
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/554 (22%), Positives = 246/554 (44%), Gaps = 64/554 (11%)
Query: 48 TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIH 107
+++ WN+++ YS+ F E++ TM ++ ++ TF+ +L C +G IH
Sbjct: 91 SLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIH 150
Query: 108 CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMS 167
+ EC F+G+GL+ Y ++ A++VFD++
Sbjct: 151 QDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKM---------------------- 188
Query: 168 DAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
P KDV W +ISG ++S + CE AL++F+ M+ P+ + ++ A
Sbjct: 189 ---------PGKDVASWNAMISGLSQSSNPCE-ALEIFQRMQMEEGVEPDSVSILNLAPA 238
Query: 228 CARLGAFCEGKVVHGLLI-KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
+RL K +HG ++ +C F + +LI+ Y C A +++D++ +
Sbjct: 239 VSRLEDVDSCKSIHGYVVRRCVFGV---VSNSLIDMYSKCGEVKLAHQIFDQMWVKDDIS 295
Query: 287 SNSLINGLISMG----------RIEDAELIFNRLTEANSI----SYNSMIKGYAVYG--- 329
+++ G + G ++ + N+++ NS+ + KG V+
Sbjct: 296 WATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYAL 355
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQNNLHEK 381
Q+ + + P I+S+ + + + R+ V W++ +S VQ +
Sbjct: 356 QLGMTSDIVVATP---IVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGE 412
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
AL ++ M+ + ++ S L AC+ + S + G+++H +++K S++ V T+LV
Sbjct: 413 ALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVS 472
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY+RC S A F+ + +V AW L+NG++ G A+ +F + + P++ T
Sbjct: 473 MYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGT 532
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
V +LSAC + G+ ++ G+ + ++D+ + G L AE
Sbjct: 533 MVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNK 592
Query: 562 IELDAVVWGALLSA 575
D V W +++
Sbjct: 593 HVKDEVSWNVMIAG 606
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 175/369 (47%), Gaps = 29/369 (7%)
Query: 162 QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTF 221
QC L ++ + +++W LI Y++ + ++A+K ++ M G P++YTF
Sbjct: 79 QCTLAPNS------ITNPSLILWNSLIRAYSR-LHLFQEAIKSYQTMSYMGLE-PDKYTF 130
Query: 222 DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
V++AC F EG +H + E D IG L++ YC D A +V+D++
Sbjct: 131 TFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPG 190
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRL-----TEANSISYNSMIKGYAVYGQVDDSKR 336
+ + N++I+GL +A IF R+ E +S+S ++ + VD K
Sbjct: 191 KDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKS 250
Query: 337 LFEKMPHRSII-----SLNTMISVIPEME-----------RNPVTWNSMISGYVQNNLHE 380
+ + R + SL M S E++ ++ ++W +M++GYV + +
Sbjct: 251 IHGYVVRRCVFGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYF 310
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+ LQL M++ I + + A + L++G+ +H + ++ S++ V T +V
Sbjct: 311 EVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIV 370
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
MY++CG + A+ F S+ ++ W+A ++ G EA+ +F+ M + + P+
Sbjct: 371 SMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKT 430
Query: 501 TFVGVLSAC 509
++SAC
Sbjct: 431 ILSSLVSAC 439
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/534 (22%), Positives = 210/534 (39%), Gaps = 98/534 (18%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV ++ + G+L A+ F + R +V W+ L + E+LS+ M
Sbjct: 363 IVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQH 422
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+K ++T S+++S CA+++S GK +HC V+K+ V + L+ Y C
Sbjct: 423 EGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMY 482
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F+ +H + + W+ ++ G+ +C A ++F+++ V
Sbjct: 483 AMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGV---------------- 526
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
P+ T S++ ACA L G HG +IK G E + +
Sbjct: 527 -----------------QPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKV 569
Query: 258 ALIEFYCGCEAFDGAMRVYD-----------------RLENPCLNASNSLIN-------- 292
ALI+ Y C + A ++ L N C N + S N
Sbjct: 570 ALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVR 629
Query: 293 -GLISMGRIEDAELIFNRLTEA--------------NSISYNSMIKGYAVYGQVDDSKRL 337
L++ I A + L EA +++ NS+I YA GQ+ S++
Sbjct: 630 PNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKC 689
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
F +M ++ IS WN+M+SGY + E AL L+ M++ +
Sbjct: 690 FHEMENKGTIS-----------------WNAMLSGYAMHGQGEVALALFSLMQETHVPVD 732
Query: 398 RSTFSVLFHACSCLGSLQQGQ-LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
++ + AC G +Q+G+ + + K E ++ +VD+ G ++
Sbjct: 733 SVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLI 792
Query: 457 SSI-SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ--DIVPNAATFVGVLS 507
+ + P+ W AL+ H V L EI L + P A VLS
Sbjct: 793 DKMPTEPDAQVWGALLGACKMH----SNVKLGEIALHHLLKLEPRNAVHYIVLS 842
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 121/238 (50%), Gaps = 21/238 (8%)
Query: 354 SVIPEMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
++ P NP + WNS+I Y + +L ++A++ Y TM + ++ + TF+ + AC+
Sbjct: 81 TLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGA 140
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
+G +H + E +V++GT LVDMY + G +++A+ F + +VA+W A++
Sbjct: 141 LDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMI 200
Query: 472 NGYSHHGLGSEAVLLFEIM-LEQDIVPNAATFVGVLSACVRAGLVN-----EGMKIFRSM 525
+G S EA+ +F+ M +E+ + P++ + + + A R V+ G + R +
Sbjct: 201 SGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCV 260
Query: 526 KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS-----ACWF 578
+GVV ++D+ + G + A + M ++ D + W +++ C+F
Sbjct: 261 --FGVVS-----NSLIDMYSKCGEVKLAHQIFDQMWVK-DDISWATMMAGYVHHGCYF 310
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 204/682 (29%), Positives = 334/682 (48%), Gaps = 61/682 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I G+ G + +A +FD+MP R +VSWN+++ + F+ES L + +
Sbjct: 235 NALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEG 294
Query: 82 L--NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEA 138
L + T T++ +CA+ + G H L LK G C E V S LL Y+ C + EA
Sbjct: 295 LMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGL-CGELKVNSSLLDMYSKCGYLCEA 353
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +FD +E N + W+ M+ GY + AF++ KM +D V
Sbjct: 354 RVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKV---------------- 396
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF-EFDESIGG 257
NE T +V+ C F + K +HG ++ GF + DE +
Sbjct: 397 ----------------KVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVAN 440
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF---------- 307
A + Y C + A V+ +E+ +++ N+LI G + G A ++
Sbjct: 441 AFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEP 500
Query: 308 NRLTEANSISYNSMIK----GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI------- 356
+ T A+ +S + +K G ++G + + ++ S++SL I
Sbjct: 501 DLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFF 560
Query: 357 -PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
E+N V WN+MI+G+ QN AL ++ M I + ACS + +L+
Sbjct: 561 DNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALR 620
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G+ LH VK+ + +V SL+DMY++CG + +Q F + W L+ GY
Sbjct: 621 LGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYG 680
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTL 534
HG G +A+ LF+ M P++ TF+ +L+AC AGLV EG++ M+S +G+ P L
Sbjct: 681 IHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKL 740
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY CVVD+LGR+G L+EA E + ++P + D+ +W +LLS+C + ++++GE+ A K+
Sbjct: 741 EHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLE 800
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
L YV++SN YA LGKW + +R+R+ + ++KD GCSWIE+ +V F V D
Sbjct: 801 LGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDE 860
Query: 655 NNPNCNVIYATLEHLTANLNSV 676
+ I T L +N +
Sbjct: 861 SLLQSMKIQQTWIELEKKINKI 882
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 137/567 (24%), Positives = 244/567 (43%), Gaps = 70/567 (12%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKF-DESLSLVSTMHRSNVKLNETTFSTILSVCAQLN 98
+F+ + + WN +L GY + + F D V + + + T ++ C +
Sbjct: 151 VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVY 210
Query: 99 SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLV 158
+ G+ +H LK+ FVG+ L+ Y +E A +VFD
Sbjct: 211 DVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFD--------------- 255
Query: 159 GYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGEN-MP 216
KMP++++V W ++ YA +G E++ LF+ + E MP
Sbjct: 256 ----------------KMPQRNLVSWNSVM--YACLENGVFEESYGLFKGLLNGDEGLMP 297
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ T +VI CAR G G V HGL +K G + + +L++ Y C A ++
Sbjct: 298 DVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF 357
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM--------------- 321
D E + + NS+I G A + ++ + + N +
Sbjct: 358 DTNEKNVI-SWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQF 416
Query: 322 -----IKGYAVYGQVDDSKRLFEK---MPHRSIISLNTMISVIPEMERNPV-TWNSMISG 372
I GYA+ S L + SL+ V ME V +WN++I G
Sbjct: 417 LKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGG 476
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
+VQN KAL LY+ MR ++ T + L AC+ L SL G+ +H +++ FE +
Sbjct: 477 HVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELD 536
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
++ SLV +Y +CG I A+ F ++ N+ W ++NG+S + +A+ +F ML
Sbjct: 537 EFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLS 596
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL-EH--YTC-VVDLLGRSG 548
I P+ + +G L AC + +++ + + + V L EH TC ++D+ + G
Sbjct: 597 SKIWPDEISIIGALGACSQV----SALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCG 652
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSA 575
+ +++ + ++ V W L++
Sbjct: 653 CMEQSQNIFDRVHLK-GEVTWNVLITG 678
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 213/459 (46%), Gaps = 37/459 (8%)
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+++ +L + ++ Y C+ D+ VF +K++ +W L+SGY ++ A+ +F
Sbjct: 126 QNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRN-SLFRDAVFVFV 184
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
M E +P+ +T VI+AC + G+ VHG +K D +G ALI Y
Sbjct: 185 EMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKF 244
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS---ISYNSMIK 323
+ A++V+D++ L + NS++ + G E++ +F L + +M+
Sbjct: 245 GFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVT 304
Query: 324 -------------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-------ERNP 363
G +G E + S++ + + + E E+N
Sbjct: 305 VIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEKNV 364
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAI-DRTRSTFSVLFHACS-CLGSLQQGQL-- 419
++WNSMI GY ++ A +L +RK+ + D+ + L + C +Q +L
Sbjct: 365 ISWNSMIGGYSKDRDFRGAFEL---LRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKE 421
Query: 420 LHAHLVKTPF-ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H + ++ F +S+ V + V Y++CGS++ A+ F + S V++W AL+ G+ +G
Sbjct: 422 IHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNG 481
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
+A+ L+ +M + P+ T +LSAC R ++ G +I SM G L+ +
Sbjct: 482 FPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGF--ELDEFI 539
Query: 539 CV--VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
C+ V L + G + A+ F +M E + V W +++
Sbjct: 540 CISLVSLYVQCGKILLAKLFFDNME-EKNLVCWNTMING 577
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 154/340 (45%), Gaps = 57/340 (16%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E + +S +CG+ ++ A+ FD M + +V WNTM+ G+S+ ++L +
Sbjct: 537 EFICISLVSLYVQCGK---ILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQ 593
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M S + +E + L C+Q+++L GK++HC +KS FV L+ YA C
Sbjct: 594 MLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGC 653
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+E+++ +FD +H E+ W++++ GY I G+ +
Sbjct: 654 MEQSQNIFDRVHLKGEVTWNVLITGYG--------------------------IHGHGR- 686
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
KA++LF+ M+ +G P+ TF +++ AC G EG G + +S
Sbjct: 687 -----KAIELFKSMQNAGFR-PDSVTFIALLTACNHAGLVAEGLEYLGQM--------QS 732
Query: 255 IGG---ALIEFYCGCEAFDGAMRVYDRLE-------NPCLNASNSLINGLISMGRIEDAE 304
+ G L + C + A R+ + LE P +SL++ + ++ E
Sbjct: 733 LFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGE 792
Query: 305 LIFNRLTEA---NSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ N+L E + +Y + YA G+ D+ +++ ++M
Sbjct: 793 KVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRM 832
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 136/300 (45%), Gaps = 28/300 (9%)
Query: 237 GKVVHGLL-IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI 295
G+ +H + F+ D + L+ Y C++ + V++ L N+L++G +
Sbjct: 112 GRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYL 171
Query: 296 SMGRIEDAELIFNR---LTE--ANSISYNSMIK----------GYAVYGQVDDSKRLFEK 340
DA +F LTE ++ + +IK G AV+G +K L +
Sbjct: 172 RNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDV 231
Query: 341 MPHRSIISL-------NTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRK- 391
++I++ + + V +M +RN V+WNS++ ++N + E++ L+ +
Sbjct: 232 FVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNG 291
Query: 392 -LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
+ +T + C+ G ++ G + H +K + V +SL+DMYS+CG +
Sbjct: 292 DEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLC 351
Query: 451 DAQASFSSISSPNVAAWTALMNGYSH-HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+A+ F + + NV +W +++ GYS LL ++ +E + N T + VL C
Sbjct: 352 EARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQA 454
+ + +L C +++ G+ +H + +P F+++V + T LV MYS C S D+
Sbjct: 91 KPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCL 150
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAG 513
F++ N+ W AL++GY + L +AV +F E++ + VP+ T V+ ACV
Sbjct: 151 VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVY 210
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V G + V+ + ++ + G+ G + A + MP + + V W +++
Sbjct: 211 DVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP-QRNLVSWNSVM 269
Query: 574 SAC 576
AC
Sbjct: 270 YAC 272
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 190/676 (28%), Positives = 322/676 (47%), Gaps = 57/676 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNV 80
N + + + GQL AR +FD+M R +SW T++ GY + E+L L S M
Sbjct: 61 NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGP 120
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ ++ S L CA ++ G+ +H +KSG FV S L+ Y +IE+ R
Sbjct: 121 QRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCR 180
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF+++ N + W+ ++ G V + F +M + V GY
Sbjct: 181 VFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKV--------GY--------- 223
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
+ +TF ++A A GK +H IK GF+ + L
Sbjct: 224 ----------------DSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLA 267
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSI 316
Y C D MR+++++ P + + +LI+ + MG E A F R+ ++ N
Sbjct: 268 TMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKY 327
Query: 317 SYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE-------- 358
++ ++I G ++G V + SII+L + ++
Sbjct: 328 TFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGI 387
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
++ ++W+++IS Y Q ++A MR+ S + C + L+QG+
Sbjct: 388 TRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGK 447
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+HAHL+ + V ++++ MYS+CGS+ +A F+ + ++ +WTA++NGY+ HG
Sbjct: 448 QVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHG 507
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHY 537
EA+ LFE + + P+ F+GVL+AC AG+V+ G F M + Y + P+ EHY
Sbjct: 508 YSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHY 567
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
C++DLL R+G L EAE I+ MP D VVW LL AC +++ G A+++ LD
Sbjct: 568 GCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDP 627
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
++ L+NIYA G+W + IRK + V K+ G SW+ +N +++AF D+ +P
Sbjct: 628 NSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHP 687
Query: 658 NCNVIYATLEHLTANL 673
I L+ L+AN+
Sbjct: 688 QSEHITTVLKLLSANI 703
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 124/580 (21%), Positives = 243/580 (41%), Gaps = 108/580 (18%)
Query: 5 ATQSQTL---MTQETLIVSTNKAI-TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
A +QT+ + + +++T + +CG+ ++ LF++M + VVSW T++ Y
Sbjct: 246 AIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVM---RLFEKMRMPDVVSWTTLISTYV 302
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ + + ++ M +S V N+ TF+ ++S CA L + G+QIH VL+ G
Sbjct: 303 QMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALS 362
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
V + ++ Y+ C ++ A VF + + + WS ++ Y Q
Sbjct: 363 VANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQ------------------ 404
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
GYAK +A WMR G PNE+ SV+ C + +GK V
Sbjct: 405 --------GGYAK------EAFDYLSWMRREGPK-PNEFALSSVLSVCGSMALLEQGKQV 449
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
H L+ G + + + A+I Y C G +
Sbjct: 450 HAHLLCIGIDHEAMVHSAIISMYSKC-------------------------------GSV 478
Query: 301 EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
++A IFN + + IS+ +MI GYA +G ++ LFEK+ + + + P+
Sbjct: 479 QEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKI---------SSVGLKPDY- 528
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKL-AIDRTRSTFSVLFHACSCLGSLQQGQL 419
V + +++ + + +M M + I ++ + L G L + +
Sbjct: 529 ---VMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAE- 584
Query: 420 LHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSISS--PNVAA-WTALMNGYS 475
H++++ PF ++ V ++L+ G ++ + + + PN A L N Y+
Sbjct: 585 ---HIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYA 641
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAA-TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
G EA + ++M + ++ ++V VN+ + F + P
Sbjct: 642 AKGRWKEAAHIRKLMKSKGVIKERGWSWVN----------VNDQLNAFVAGDQ--AHPQS 689
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
EH T V+ LL S ++ +A++ I+ + +++ + + +LS
Sbjct: 690 EHITTVLKLL--SANIGDAQQEIRSLHEDVEDLAYSCILS 727
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 143/326 (43%), Gaps = 40/326 (12%)
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
N + N + NS +K GQ+ ++ +F+KM HR + ++W
Sbjct: 50 NAYSVHNMLELNSELKQLVKQGQLCKARYMFDKMTHR-----------------DEISWT 92
Query: 368 SMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
++I+GYV + +AL L+ M R + SV AC+ ++ G+LLH VK
Sbjct: 93 TLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVK 152
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ +V+V ++L+DMY + G I F + + NV +WTA++ G H G E +L
Sbjct: 153 SGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLY 212
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG------VVPTLEHYTCV 540
F M + ++ TF L A + L++ G I G V+ TL +
Sbjct: 213 FSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTL---ATM 269
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
+ G+ ++ E ++ MP D V W L+S ++ M E A + + K +
Sbjct: 270 YNKCGKPDYVMRLFEKMR-MP---DVVSWTTLIST---YVQMGEEEHAVEAFKRMRKSYV 322
Query: 601 S------AYVILSNIYAVLGKWGKKM 620
S A VI S KWG+++
Sbjct: 323 SPNKYTFAAVISSCANLAAAKWGEQI 348
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 283/544 (52%), Gaps = 36/544 (6%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y +C + A VF MP ++ V L+SGYA S +++L+L R + + NEY
Sbjct: 55 YAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASS-GRHKESLQLLRVV----DFGMNEY 109
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
+ + A A + ++ G+ HG +K GF + A++ YC C + A +V++ +
Sbjct: 110 VLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESV 169
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLT-EANSISYNSMIKGYAVYGQVDDS---- 334
A NS+ING + G+++ + I +T EA Y S + + DS
Sbjct: 170 SGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGA 229
Query: 335 --------KRL-------------FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
KRL + K H + N V+PE +N V+W ++++ Y
Sbjct: 230 QVHAQALKKRLELNVYVGSALVDMYGKCDH--VHDANRAFEVLPE--KNVVSWTAVMTAY 285
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
QN L+E ALQL++ M + T++V ++C+ L +L+ G L A ++KT ++
Sbjct: 286 TQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHL 345
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
V +L++MYS+ GSI DA F S+ +V +W ++ GY+HHGL E + F ML
Sbjct: 346 LVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSA 405
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVVPTLEHYTCVVDLLGRSGHLHE 552
++P+ TFVGVLSAC + GLV+E + MK G+ P EHYTC+V LL R G L E
Sbjct: 406 AVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDE 465
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
AE FI + I D V W +LL++C + N +G R A+++ L+ + YV+LSN+YA
Sbjct: 466 AERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAK 525
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTAN 672
+W + +RK + V+K PG SWI + S VH F+ E++ +P + I LE L
Sbjct: 526 ANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQ 585
Query: 673 LNSV 676
+ ++
Sbjct: 586 IKAI 589
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/516 (23%), Positives = 217/516 (42%), Gaps = 115/516 (22%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
+CGR G AR +FD MP R VS N ++ GY+ + ESL L+ + + +NE
Sbjct: 56 AKCGRVG---LARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLLRVV---DFGMNEY 109
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
S +S A + S G+Q H +K+G+ +V + +L+ Y C +E+A +VF+ +
Sbjct: 110 VLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESV 169
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK--SVDGCEKALK 203
FD F + +I+GY +DG +L
Sbjct: 170 ----------------------SGFDAF---------AFNSMINGYLDRGQLDG---SLG 195
Query: 204 LFRWMRESGENMPNEY-TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
+ R M +GE +Y ++ +V+ CA + G VH +K E + +G AL++
Sbjct: 196 IVRNM--TGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDM 253
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISY 318
Y C+ A R ++ L + + +++ EDA +F + + N +Y
Sbjct: 254 YGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTY 313
Query: 319 -----------------------------------NSMIKGYAVYGQVDDSKRLFEKMPH 343
N+++ Y+ G ++D+ R+F MP
Sbjct: 314 AVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPL 373
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
R ++S WN +I+GY + L + ++ + +M A+ + TF
Sbjct: 374 RDVVS-----------------WNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVG 416
Query: 404 LFHACSCLGSLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDAQASF-SS 458
+ AC+ LG + + ++K TP + + T +V + R G +++A+ ++
Sbjct: 417 VLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHY---TCMVGLLCRVGRLDEAERFIVNN 473
Query: 459 ISSPNVAAWTALMNG---YSHHGLG---SEAVLLFE 488
+V AW +L+N Y ++GLG +E +L E
Sbjct: 474 CIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLE 509
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 176/412 (42%), Gaps = 37/412 (8%)
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA--SNS 289
G +GK +H LI FD + LI FY C A V+D + P NA +N
Sbjct: 25 GDLSKGKALHARLITAA-HFDVVLHNNLISFYAKCGRVGLARTVFDAM--PFRNAVSANL 81
Query: 290 LINGLISMGRIEDA-------ELIFNRLTEANSISYNSMIK---------GYAVYGQVDD 333
L++G S GR +++ + N + ++S + ++ GYAV +
Sbjct: 82 LMSGYASSGRHKESLQLLRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAE 141
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMER--------NPVTWNSMISGYVQNNLHEKALQL 385
+ +F +++ + + + + + + +NSMI+GY+ + +L +
Sbjct: 142 QRYVFN-----AVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGI 196
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
M A ++ + C+ + G +HA +K E NVYVG++LVDMY +
Sbjct: 197 VRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGK 256
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
C ++DA +F + NV +WTA+M Y+ + L +A+ LF M + + PN T+
Sbjct: 257 CDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVA 316
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
L++C + G + + G L ++++ +SG + +A MP+ D
Sbjct: 317 LNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLR-D 375
Query: 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
V W +++ G A M L I +YV + + + G
Sbjct: 376 VVSWNLIITGYAHHGLAREGMEAFHSM--LSAAVIPSYVTFVGVLSACAQLG 425
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 152/381 (39%), Gaps = 68/381 (17%)
Query: 6 TQSQTLMTQETLIVSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK 64
+Q L + L V A+ + G+ + A F+ +P + VVSW ++ Y++
Sbjct: 231 VHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNEL 290
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
++++L L M V+ NE T++ L+ CA L +L G + V+K+G+ V +
Sbjct: 291 YEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNA 350
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
L+ Y+ IE+A RVF + + + W+L++ GY L + + F M V+
Sbjct: 351 LMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVI-- 408
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
P+ TF V+ ACA+LG E +
Sbjct: 409 -------------------------------PSYVTFVGVLSACAQLGLVDEAFYYLNTM 437
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
+K + I + C ++ L +GR+++AE
Sbjct: 438 MK-----EVGITPGKEHYTC-------------------------MVGLLCRVGRLDEAE 467
Query: 305 -LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP 363
I N + +++ S++ VY R+ E++ + T + ++ M
Sbjct: 468 RFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYV-LLSNMYAKA 526
Query: 364 VTWNSMISGYVQNNLHEKALQ 384
W+ ++ V+ ++ E+A++
Sbjct: 527 NRWDGVVK--VRKHMRERAVR 545
>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
Length = 591
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 190/603 (31%), Positives = 300/603 (49%), Gaps = 52/603 (8%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
LN FS +L+ C + L G +H V+K+ + C + V
Sbjct: 9 LNYARFSGLLASCGREGDLRLGAALHAAVVKNPAH------------FRLCASRPWLRHV 56
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
+ W+ ++ Y +C DA VF +M +D V W LI+ + G A
Sbjct: 57 L--------VAWNSLVSMYARCGRREDAARVFDEMRVRDAVSWNSLIA----ASRGAGDA 104
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGA--FCEGKVVHGLLIKCGFEFDESIGGAL 259
L LFR M S + TF +V+ CAR GA +VHGL++ CGFE + +G AL
Sbjct: 105 LALFRRMLRSDARACDRATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNAL 164
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN---RLTEANSI 316
+ Y C + A RV+ + + ++I+G+ +++ +F R +AN+
Sbjct: 165 VTAYFECGSPASAERVFHGMAEKNVITWTAMISGMARAELYKESFSLFGQMIRTVDANNA 224
Query: 317 SYNSMI----------KGYAVYGQVDDSKRLFEKMPH--RSIISLNTMISVIPEM----- 359
+Y+ + +G V+G V K FE H ++ + + ++ +
Sbjct: 225 TYSCALLACARSLAAREGQQVHGLV--VKAGFEDDLHVESGLMDVYSKCGLMEDALTVFR 282
Query: 360 ---ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
E + V ++ G+ QN L EKA +L+ M + +T S + A
Sbjct: 283 SCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFAL 342
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +HA ++K F N YV LV+MYS+CG + ++ F + S N +W +++ ++
Sbjct: 343 GKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFAR 402
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLE 535
HG GSE LFE M P TF+ +L AC G +G++I SM S YGV+P +E
Sbjct: 403 HGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRME 462
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
HY CVVD+LGR+G L +A+ FI+D P +A++W AL+ AC F N EVG+ AA+K+ L
Sbjct: 463 HYACVVDMLGRAGLLDDAKSFIEDGPFTDNALLWQALMGACSFHGNSEVGKYAAEKLLLL 522
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN 655
D +AYV+LSNIY+ G+W + + KR++ + ++KD G SWIEL VH+F V +
Sbjct: 523 DPSCTAAYVLLSNIYSSEGRWDDRAKVMKRMSEMGLRKDTGKSWIELEKEVHSFVVRSTS 582
Query: 656 NPN 658
+PN
Sbjct: 583 HPN 585
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 222/507 (43%), Gaps = 100/507 (19%)
Query: 17 LIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
++V+ N ++ R G+ A +FD+M +R VSWN+++ S+ A ++L+L M
Sbjct: 56 VLVAWNSLVSMYARCGRREDAARVFDEMRVRDAVSWNSLIAA-SRGA--GDALALFRRML 112
Query: 77 RSNVKL-NETTFSTILSVCAQLN--SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
RS+ + + TF+T+LS CA+ SL +H LV+ G+E VG+ L+ Y C
Sbjct: 113 RSDARACDRATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECG 172
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
A+RVF + E N + W+ M+ G + L ++F +F +M +
Sbjct: 173 SPASAERVFHGMAEKNVITWTAMISGMARAELYKESFSLFGQM---------------IR 217
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+VD N T+ + ACAR A EG+ VHGL++K GFE D
Sbjct: 218 TVDA-------------------NNATYSCALLACARSLAAREGQQVHGLVVKAGFEDDL 258
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENP---------------------------CLNA 286
+ L++ Y C + A+ V+ P + A
Sbjct: 259 HVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGA 318
Query: 287 SNSLINGLIS-------------MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
N + +S +G+ A L+ R N+ N ++ Y+ G++ +
Sbjct: 319 GNEIDENTVSAVLGAFGASAPFALGKQIHA-LVIKRCFGVNTYVCNGLVNMYSKCGELRE 377
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
S R+F++MP +N V+WNS+I+ + ++ + QL+ +M+
Sbjct: 378 SVRVFDEMP-----------------SKNSVSWNSIIAAFARHGHGSEVYQLFESMKADG 420
Query: 394 IDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
T TF L HACS +GS ++G ++L++ + + +VDM R G ++DA
Sbjct: 421 AKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDA 480
Query: 453 QASFSSIS-SPNVAAWTALMNGYSHHG 478
++ + N W ALM S HG
Sbjct: 481 KSFIEDGPFTDNALLWQALMGACSFHG 507
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 111/266 (41%), Gaps = 9/266 (3%)
Query: 53 NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
+L G+++ +++ L + M + +++E T S +L GKQIH LV+K
Sbjct: 293 TVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIK 352
Query: 113 SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
+ +V +GL+ Y+ C E+ E+ RVFDE+ N + W+ ++ + + S+ + +
Sbjct: 353 RCFGVNTYVCNGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQL 412
Query: 173 FIKM----PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC 228
F M K V + L+ + V +K L++ M +P + V+
Sbjct: 413 FESMKADGAKPTDVTFLSLLHACSH-VGSAKKGLEILNSMSSQYGVLPRMEHYACVVDML 471
Query: 229 ARLGAFCEGK--VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
R G + K + G + +G F+ E A L+ C A
Sbjct: 472 GRAGLLDDAKSFIEDGPFTDNALLWQALMGA--CSFHGNSEVGKYAAEKLLLLDPSCTAA 529
Query: 287 SNSLINGLISMGRIEDAELIFNRLTE 312
L N S GR +D + R++E
Sbjct: 530 YVLLSNIYSSEGRWDDRAKVMKRMSE 555
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 187/690 (27%), Positives = 319/690 (46%), Gaps = 96/690 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR+LFDQ+P + +N ++ YS S R + N TF +L
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ L L + +HC ++G FV + L+ YA C A
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAA------------ 184
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
VF +MP +DVV W +++GYA + M++
Sbjct: 185 -------------------TVFRRMPARDVVAWNAMLAGYALH-GKYSDTIACLLLMQD- 223
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES----IGGALIEFYCGCE 267
++ PN T +++ A+ GA +G+ VH ++ D +G AL++ Y C
Sbjct: 224 -DHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCG 282
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----------------- 310
A RV++ + ++L+ G + GR+ +A +F +
Sbjct: 283 HLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASAL 342
Query: 311 -----------------------TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
+ + NS++ YA G +D + LF++M
Sbjct: 343 RACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQM------ 396
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
+ ++ V++++++SGYVQN ++A +++ M+ + +T L A
Sbjct: 397 -----------VVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPA 445
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
CS L +LQ G+ H ++ S + +L+DMY++CG I+ ++ F + + ++ +W
Sbjct: 446 CSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSW 505
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
++ GY HGLG EA LF M Q P+ TF+ ++SAC +GLV EG + F M
Sbjct: 506 NTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAH 565
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
YG+ P +EHY +VDLL R G L EA +FI+ MP++ D VWGALL AC N+++G+
Sbjct: 566 KYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGK 625
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
+ + + L + +V+LSNI++ G++ + ++R KK PGCSWIE+N +
Sbjct: 626 QVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSL 685
Query: 647 HAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
HAF DR++ + IY L+++ ++N +
Sbjct: 686 HAFIGGDRSHAQSSEIYQELDNILVDINKL 715
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 195/443 (44%), Gaps = 37/443 (8%)
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
C +S A +F ++P + + LI Y S+ G AL+L+R +R PN YTF
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAY--SLRGPALALRLYRSLRRRRLPQPNNYTFP 133
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
V++AC+ L + VH + G D + AL++ Y C +F A V+ R+
Sbjct: 134 FVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPAR 193
Query: 283 CLNASNSLINGLISMGRIED--AELIFNRLTEANSIS-----------YNSMIKGYAVYG 329
+ A N+++ G G+ D A L+ + A + S + ++ +G AV+
Sbjct: 194 DVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHA 253
Query: 330 QVDDSKRLFEKMPHRSIISLNTMI--------------SVIPEME-RNPVTWNSMISGYV 374
S R H+ + + T + V M RN VTW++++ G+V
Sbjct: 254 Y---SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFV 310
Query: 375 QNNLHEKALQLY--MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
+A L+ M + L S S L AC+ L L G+ LHA L K+ ++
Sbjct: 311 LCGRMLEAFSLFKDMLAQGLCFLSPTSVASAL-RACANLSDLCLGKQLHALLAKSGLHTD 369
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
+ G SL+ MY++ G I+ A F + + +++AL++GY +G EA +F M
Sbjct: 370 LTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQA 429
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552
++ P+ AT V ++ AC + G S+ G+ ++D+ + G +
Sbjct: 430 CNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDL 489
Query: 553 AEEFIKDMPIELDAVVWGALLSA 575
+ + MP D V W +++
Sbjct: 490 SRQIFDVMPAR-DIVSWNTMIAG 511
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
T + + N ++ + G + A LFDQM ++ VS++ ++ GY + K DE+ +
Sbjct: 367 HTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRK 426
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M NV+ + T +++ C+ L +L GK H V+ G + + L+ YA C
Sbjct: 427 MQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGR 486
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I+ ++++FD + + + W+ M+ GY L +A +F+ M +
Sbjct: 487 IDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQ--------------- 531
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
CE P++ TF +I AC+ G EGK
Sbjct: 532 --ACE----------------PDDVTFICLISACSHSGLVTEGK 557
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 286/550 (52%), Gaps = 67/550 (12%)
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
+F ++ K +V W + Y++S E + L+ M +G +P+ Y+F V++ACARL
Sbjct: 83 LFFQIHKPNVFSWNFMFRAYSRSSFPAE-TIALYNLMLRNG-TLPDNYSFPFVLKACARL 140
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS---- 287
+G+ +H +K G D + ALI + C A + A V+D L P L
Sbjct: 141 SLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDML--PALVRDVVSW 198
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYN---------------------------- 319
NS+I+G + R E A +F L S+S +
Sbjct: 199 NSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFT 258
Query: 320 ------------SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
S+I Y+ GQ++D++++F+++PH RN V W
Sbjct: 259 GSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPH-----------------RNTVCWT 301
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
SMI+GY Q++L ++A++L+ M+ +T + + AC G+L QG+ +H + +
Sbjct: 302 SMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERN 361
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
E ++ +L+ MYS+CG I A F ++ P++ +W+A+++G + +G +A+ LF
Sbjct: 362 SIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLF 421
Query: 488 EIM-LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLG 545
M + DI PN TF+GVL AC G V++G+ F +M Y + P +EHY C+VDLLG
Sbjct: 422 SQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLG 481
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+ L EAE+FI+ +PI+ D V+W +LL AC N+E+ E AA+++ L+ + A V+
Sbjct: 482 RANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVL 541
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
LSN+YA +WG +RK + +KK PGCS++E++ VH V DR++P IY T
Sbjct: 542 LSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYET 601
Query: 666 LEHLTANLNS 675
+ + L S
Sbjct: 602 MISINKALQS 611
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 206/506 (40%), Gaps = 95/506 (18%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS+ + +R LF Q+ V SWN M YS+ + E+++L + M R
Sbjct: 61 VVSSKLLYYSLSHDHDFAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLR 120
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + +F +L CA+L+ L G++IH LK G FV + L+ +++C +E
Sbjct: 121 NGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEA 180
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VFD ML V +DVV W +ISGY +S
Sbjct: 181 ARAVFD------------MLPALV-----------------RDVVSWNSMISGYLQS-HR 210
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
E ALK+F + G P+E T S + C RLG GK +HGL GF D +G
Sbjct: 211 YELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGS 270
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT------ 311
+LI+ Y C + A +V+DR+ + S+I G ++A +F +
Sbjct: 271 SLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAA 330
Query: 312 ----------------------------EANSI-----SYNSMIKGYAVYGQVDDSKRLF 338
E NSI + N++I Y+ G + + +F
Sbjct: 331 DAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIF 390
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRT 397
+ I S W+++ISG N +KAL L+ M ++ I
Sbjct: 391 HGLTQPDIFS-----------------WSAVISGLAMNGESDKALHLFSQMEMISDIRPN 433
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS----LVDMYSRCGSINDAQ 453
TF + AC+ G + +G + + N+ G +VD+ R + +A+
Sbjct: 434 EITFLGVLCACNHGGFVDKGLYYFNAMTQI---YNLTPGIEHYGCMVDLLGRANLLVEAE 490
Query: 454 ASFSSIS-SPNVAAWTALMNGYSHHG 478
++ P+V W +L+ +HG
Sbjct: 491 KFIRTLPIQPDVVIWRSLLFACRNHG 516
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 183/632 (28%), Positives = 307/632 (48%), Gaps = 89/632 (14%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+L C Q + G+++H +V S C +FV
Sbjct: 107 AMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFV------------------------ 142
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
L + ++ Y C SD+ VF K+ +K++ W ++S Y ++ + E A+ +F
Sbjct: 143 ------LNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRN-ELFEDAMSIF 195
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
+ E+ P+ +T VI+ACA L G+++HG+ K D +G ALI Y
Sbjct: 196 SELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGK 255
Query: 266 CEAFDGAM-RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----------- 313
C + A+ RV+D ++ +++ N+L+ G A ++ ++T++
Sbjct: 256 CGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGS 315
Query: 314 --------NSISYNSMIKGYAVY--------------------GQVDDSKRLFEKMPHRS 345
S+ Y I G+A+ G+ ++ LF+ M HRS
Sbjct: 316 LLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRS 375
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
++S WN MI+GY QN L ++A+ L+ M I +
Sbjct: 376 LVS-----------------WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVC 418
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
ACS L +L+ G+ LH +K +++V +S++DMY++ G I +Q F + +VA
Sbjct: 419 GACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVA 478
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
+W ++ GY HG G EA+ LFE ML + P+ TF G+L AC AGLV +G++ F M
Sbjct: 479 SWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQM 538
Query: 526 KS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
+ + + P LEHYTCVVD+LGR+G + +A I++MP + D+ +W +LLS+C N+ +
Sbjct: 539 LNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGL 598
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
GE+ A K+ L+ + YV++SN++A GKW +R R+ + ++KD GCSWIE+
Sbjct: 599 GEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGG 658
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+VH F + D P + T L ++S+
Sbjct: 659 KVHNFLIGDEMLPELEEVRETWRRLEVKISSI 690
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 216/507 (42%), Gaps = 101/507 (19%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HR 77
V + IT G +R +FD++ + + WN ++ Y++ F++++S+ S +
Sbjct: 142 VLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISV 201
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ K + T ++ CA L L G+ IH + K FVG+ L+ Y C +EE
Sbjct: 202 TEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEE 261
Query: 138 A-KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A KRVFD + W+ +L GY Q SD P+
Sbjct: 262 AVKRVFDLMDTKTVSSWNALLCGYAQ---NSD--------PR------------------ 292
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
KAL L+ M +SG + P+ +T S++ AC+R+ + G+ +HG ++ G D IG
Sbjct: 293 ---KALDLYLQMTDSGLD-PDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIG 348
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI 316
+L+ Y C A ++D +E+ L + N +I G G ++A +F ++
Sbjct: 349 ISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQ 408
Query: 317 SY---------------------------------------NSMIKGYAVYGQVDDSKRL 337
Y +S+I YA G + S+R+
Sbjct: 409 PYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRI 468
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
F+++ E++ +WN +I+GY + ++AL+L+ M +L +
Sbjct: 469 FDRL-----------------REKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPD 511
Query: 398 RSTFSVLFHACSCLGSLQQG-----QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
TF+ + ACS G ++ G Q+L+ H ++ E T +VDM R G I+DA
Sbjct: 512 DFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHY----TCVVDMLGRAGRIDDA 567
Query: 453 QASFSSI-SSPNVAAWTALMNGYSHHG 478
+ P+ W++L++ HG
Sbjct: 568 LRLIEEMPGDPDSRIWSSLLSSCRIHG 594
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 150/342 (43%), Gaps = 75/342 (21%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G+ A+ LFD M R++VSWN M+ GYS+ DE+++L M ++ E +
Sbjct: 359 GKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVC 418
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+QL++L GK++HC LK+ FV S ++ YA I ++R+FD L E +
Sbjct: 419 GACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVA 478
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W++++ GY I G K +AL+LF M
Sbjct: 479 SWNVIIAGYG--------------------------IHGRGK------EALELFEKMLRL 506
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+++TF ++ AC+ H L++ G E+ F+
Sbjct: 507 GLK-PDDFTFTGILMACS-----------HAGLVEDGLEY-----------------FNQ 537
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEANSISYNSMIKGYAVYGQ 330
+ +++ P L +++ L GRI+DA LI + +S ++S++ ++G
Sbjct: 538 MLNLHNI--EPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGN 595
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
+ L EK+ N ++ + PE N V +++ +G
Sbjct: 596 LG----LGEKVA-------NKLLELEPEKPENYVLISNLFAG 626
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E + VS++ I + G + ++ +FD++ + V SWN ++ GY + E+L L
Sbjct: 444 EDIFVSSS-IIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEK 502
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQ-------IHCLVLK-SGYECFEFVGSGLL 126
M R +K ++ TF+ IL C+ + DG + +H + K Y C ++
Sbjct: 503 MLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTC-------VV 555
Query: 127 FFYANCFEIEEAKRVFDELHED-NELLWSLML 157
I++A R+ +E+ D + +WS +L
Sbjct: 556 DMLGRAGRIDDALRLIEEMPGDPDSRIWSSLL 587
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 255/478 (53%), Gaps = 24/478 (5%)
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
++++ C L EGK++H LL+ F D + L+ Y C A +++D + +
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSK-RL 337
+ +LI G R +DA L+ + + N + S++K + G D + R
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 338 FEKMPHRSIISLNTMIS-VIPEM------------------ERNPVTWNSMISGYVQNNL 378
+ R N +S I +M +N V+WN++I+GY +
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
+KA L+ M + + T T+S + AC+ +GSL+QG+ +HA ++K + +VG +
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+DMY++ GSI DA+ F ++ +V +W +++ GYS HGLG A+ FE ML I PN
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
TF+ VL+AC AGL++EG F MK Y V P + HY +VDLLGR+GHL A +FI
Sbjct: 320 DITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFIS 379
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
+MPI+ A VWGALL AC NME+G AA+ +F LD +V+L NIYA+ G+W
Sbjct: 380 EMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWND 439
Query: 619 KMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+RK + VKK+P CSW+E+ + VH F +D +P I+ E ++ + +
Sbjct: 440 AAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEI 497
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 215/448 (47%), Gaps = 70/448 (15%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N + + G LV AR LFD+M R VV+W ++ GYS+ + ++L L+ M R
Sbjct: 50 LVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLR 109
Query: 78 SNVKLNETTFSTILSVCAQLNS--LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+K N+ T +++L + + S ++ G+Q+H L L+ GY+ +V +L YA C +
Sbjct: 110 IGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHL 169
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
EEA+ +FD + NE+ W+ ++ GY + AF +F M +++V
Sbjct: 170 EEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENV-------------- 215
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
P +T+ SV+ ACA +G+ +GK VH L+IK G + +
Sbjct: 216 -------------------KPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFV 256
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL-------ISMGRIEDAELIFN 308
G L++ Y + + A +V+DRL + + NS++ G +++ R E E++
Sbjct: 257 GNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFE--EMLRT 314
Query: 309 RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI-ISLNTMISVIPEMERNPVTWN 367
R+ N I++ ++ + G +D+ + F+ M ++ ++ ++++ + R
Sbjct: 315 RIA-PNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGR------ 367
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+G++ ++A+Q + ++ I T + + L AC +++ G + +
Sbjct: 368 ---AGHL-----DRAIQF---ISEMPIKPTAAVWGALLGACRMHKNMELG----GYAAEC 412
Query: 428 PFE-SNVYVGTS--LVDMYSRCGSINDA 452
FE + Y GT L ++Y+ G NDA
Sbjct: 413 IFELDSHYPGTHVLLYNIYALAGRWNDA 440
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 206/487 (42%), Gaps = 99/487 (20%)
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
T+L C LN L +GK IH L+L S + + + LL YA C ++ A+++FDE+
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ ++ GY Q + DA + +M + +
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGL--------------------------- 112
Query: 209 RESGENMPNEYTFDSVIRACARLGA--FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
PN++T S+++A + +G+ +G+ +HGL ++ G++ + + A+++ Y C
Sbjct: 113 ------KPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARC 166
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISY---- 318
+ A ++D + + + N+LI G G+ + A +F+ + N +Y
Sbjct: 167 HHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVL 226
Query: 319 -------------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N+++ YA G ++D+K++F+++ R ++
Sbjct: 227 CACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVV 286
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
S WNSM++GY Q+ L + ALQ + M + I TF + A
Sbjct: 287 S-----------------WNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTA 329
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAA 466
CS G L +G+ + K E + ++VD+ R G ++ A S + P A
Sbjct: 330 CSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAV 389
Query: 467 WTALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
W AL+ H LG A E + E D T V + + AG N+ K+ +
Sbjct: 390 WGALLGACRMHKNMELGGYAA---ECIFELD-SHYPGTHVLLYNIYALAGRWNDAAKVRK 445
Query: 524 SMKSYGV 530
MK GV
Sbjct: 446 MMKESGV 452
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 187/595 (31%), Positives = 308/595 (51%), Gaps = 70/595 (11%)
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD-------VFIKMPKKDVVVWT 185
I AK + LH N L L ++ +++S FD VF + + ++++W
Sbjct: 18 LRIIHAKMIKTGLHNTNYALSKL-----IEFSVLSPHFDGLTYAISVFDSIQEPNLLIWN 72
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
+ G+A S D AL L+ M G +PN YTF +++ACA+ AF EG+ +HG ++
Sbjct: 73 TMFRGHALSSDPVS-ALYLYVCMISLGL-VPNSYTFPFLLKACAKSKAFREGQQIHGHVL 130
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
K G + D + +LI Y + A +V+D+ + + + +LI G S G I A+
Sbjct: 131 KLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQK 190
Query: 306 IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI-ISLNTMISVIP------- 357
+F+ + + +S+N++I GYA G ++ LF++M ++ +TM++V+
Sbjct: 191 MFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSAS 250
Query: 358 ----------------------------------EME-----------RNPVTWNSMISG 372
E+E ++ ++WN++I G
Sbjct: 251 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGG 310
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK--TPFE 430
Y NL+++AL L+ M + T + AC+ LG++ G+ +H ++ K
Sbjct: 311 YTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVS 370
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM 490
+ + TSL+DMY++CG I AQ F S+ + ++++W A++ G++ HG + A +F M
Sbjct: 371 NPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRM 430
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGH 549
+ I P+ TFVG+LSAC +G+++ G IFRSM + Y + P LEHY C++DLLG SG
Sbjct: 431 RKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGL 490
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
EAEE I M ++ D V+W +LL AC N+E+GE AQ + ++ K +YV+LSNI
Sbjct: 491 FKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNI 550
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
YA G+W + R L +KK PGCS IE++S VH F + D+ +P IY
Sbjct: 551 YATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYG 605
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 210/441 (47%), Gaps = 57/441 (12%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS I NG + +A+ +FD++P++ VVSWN ++ GY++ + E+L L M +
Sbjct: 169 VVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMK 228
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+NVK +E+T T+LS CAQ S+ G+Q+H + G+ + + L+ Y C E+E
Sbjct: 229 TNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A +F+ L + + W+ ++ GY NL
Sbjct: 289 ASGLFEGLSYKDVISWNTLIGGYTHMNLY------------------------------- 317
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK--CGFEFDESI 255
++AL LF+ M SGE+ PNE T S++ ACA LGA G+ +H + K G S+
Sbjct: 318 -KEALLLFQEMLRSGES-PNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSL 375
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----T 311
+LI+ Y C + A +V+D + N L++ N++I G GR A IF+R+
Sbjct: 376 RTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGI 435
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
E + I++ ++ + G +D + +F M I+ P++E + MI
Sbjct: 436 EPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKIT--------PKLEH----YGCMID 483
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFE 430
+ L ++A ++ +M +D + L AC G+++ G+ +L+K P
Sbjct: 484 LLGHSGLFKEAEEMINSME---MDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKN 540
Query: 431 SNVYVGTSLVDMYSRCGSIND 451
S YV L ++Y+ G N+
Sbjct: 541 SGSYV--LLSNIYATAGRWNE 559
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 219/475 (46%), Gaps = 36/475 (7%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A ++FD + ++ WNTM G++ + +L L M + N TF +L
Sbjct: 53 LTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKA 112
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
CA+ + +G+QIH VLK G + +V + L+ Y E+A++VFD+ + + +
Sbjct: 113 CAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSY 172
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++ GY + A +F ++P KDVV W LISGYA++ + ++AL+LF+ M ++
Sbjct: 173 TALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGN-YKEALELFKEMMKTNV 231
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+E T +V+ ACA+ + G+ VH + GF + I ALI+ Y C + A
Sbjct: 232 K-PDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAS 290
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYG 329
+++ L + + N+LI G M ++A L+F + + N ++ S++ A G
Sbjct: 291 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLG 350
Query: 330 QVD---------DSKRLFEKMPHRSIISLNTMISVIPEME-----------RNPVTWNSM 369
+D D + P SL M + ++E R+ +WN+M
Sbjct: 351 AIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAM 410
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
I G+ + A ++ MRK I+ TF L ACS G L G+ H+ ++
Sbjct: 411 IFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGR----HIFRSMT 466
Query: 430 ESNVYVGT-----SLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
E ++D+ G +A+ +S+ P+ W +L+ HG
Sbjct: 467 EDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHG 521
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 127/281 (45%), Gaps = 27/281 (9%)
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD---MYSRCGSINDAQASFSSIS 460
L H C L SL+ ++HA ++KT + Y + L++ + + A + F SI
Sbjct: 8 LLHNCKTLQSLR---IIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQ 64
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
PN+ W + G++ A+ L+ M+ +VPN+ TF +L AC ++ EG +
Sbjct: 65 EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQ 124
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWM 580
I + G L +T ++ + ++G +A + + D D V + AL+ +
Sbjct: 125 IHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARK-VFDQSSHRDVVSYTALIKG--YAS 181
Query: 581 NMEVGERAAQKMFGLDKKPISAYV---ILSNIYAVLGKWGKKMDIRKRLTHLEVKKD--- 634
N + +AQKMF D+ P+ V L + YA G + + +++ K + VK D
Sbjct: 182 NGYI--XSAQKMF--DEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDEST 237
Query: 635 -----PGCSW---IELNSRVHAFSVEDRNNPNCNVIYATLE 667
C+ IEL +VH++ + N ++ A ++
Sbjct: 238 MVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALID 278
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 290/548 (52%), Gaps = 62/548 (11%)
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMR 209
L++ ++ Y + + ++ A + P + VV WT LI+G + +GC AL F M
Sbjct: 43 FLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQ--NGCFVSALLHFSDML 100
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
S PN++TF V++A L GK +H L +K G D +G ++ + Y
Sbjct: 101 -SDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFL 159
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISY------- 318
+ A +V+D + + L N+ I+ + GR ED+ + F L + +SI++
Sbjct: 160 NDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNAC 219
Query: 319 ----------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
N +I Y G+V+ S+ +F++M
Sbjct: 220 SDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMG-------- 271
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
ERN V+W+S+I+ YVQNN EKA L++ RK I+ T S + AC+
Sbjct: 272 ---------ERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAG 322
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L ++ G+ + A VK E N++V ++LVDMY +CGSI++A+ +F+++ N+ +W AL
Sbjct: 323 LSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNAL 382
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-Y 528
+ GY+H G ++AV L E M IVP+ + + LSAC RAG + GMKIF SMK Y
Sbjct: 383 LGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERY 442
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
GV P EHY C+VDLLGR+G + A +FIK MP +WGALL AC E+G+ A
Sbjct: 443 GVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLA 502
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A+K+F LD K +V+LSN++A G+W + +R + + +KK G SWI ++SR+H
Sbjct: 503 AEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHM 562
Query: 649 FSVEDRNN 656
F +D+++
Sbjct: 563 FQAKDKSH 570
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 188/459 (40%), Gaps = 65/459 (14%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECG------RNGQLVTARNLFDQMPIRTVVSWNT 54
M Q L +E LI N C + G L A +FD+MP R + +WN
Sbjct: 123 MDTTGKQLHALAVKEGLI---NDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNA 179
Query: 55 MLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG 114
+ + ++S+ + R K + TF L+ C+ L G Q+H +++SG
Sbjct: 180 YISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSG 239
Query: 115 YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI 174
Y V +GL+ FY C E+E ++ VFD + E N + WS ++ YVQ N A +F+
Sbjct: 240 YGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFL 299
Query: 175 KMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAF 234
+ K+D+ P ++ SV+ ACA L
Sbjct: 300 RARKEDI---------------------------------EPTDFMVSSVLCACAGLSEI 326
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
G+ V L +K E + + AL++ Y C + D A + ++ + L + N+L+ G
Sbjct: 327 EFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGY 386
Query: 295 ISMGRIEDAELIFNRLTEANSI--SYNSMIKGYAVYGQVDDSK---RLFEKMPHRSIISL 349
G A + +T A I SY S+I + + D K ++FE M R +
Sbjct: 387 AHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGV-- 444
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
E P + ++ + + E A Y ++++ T S + L AC
Sbjct: 445 ----------EPGPEHYACLVDLLGRAGMVECA---YDFIKRMPFPPTISIWGALLGACR 491
Query: 410 CLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCG 447
G + G+L L + P +S +V L +M++ G
Sbjct: 492 MHGKPELGKLAAEKLFELDPKDSGNHV--VLSNMFAATG 528
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/534 (22%), Positives = 197/534 (36%), Gaps = 94/534 (17%)
Query: 5 ATQSQTLMTQETLIVS--TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
A +Q L T +T + N + + L +A+ + + P R+VV+W ++ G +
Sbjct: 27 AAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQN 86
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
F +L S M V+ N+ TF +L L GKQ+H L +K G FVG
Sbjct: 87 GCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVG 146
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ Y+ + +A +VFDE MP +++
Sbjct: 147 CSVFDMYSKLGFLNDAYKVFDE-------------------------------MPHRNLE 175
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W IS + + +R G+ P+ TF + + AC+ G +HG
Sbjct: 176 TWNAYISNSVLHGRPEDSVIAFIELLRVGGK--PDSITFCAFLNACSDKLGLGPGCQLHG 233
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
+I+ G+ + S+ LI+FY C + + V+DR+ + +SLI + E
Sbjct: 234 FIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEK 293
Query: 303 AELIFNRL---------------------------------------TEANSISYNSMIK 323
A +F R E N ++++
Sbjct: 294 ASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVD 353
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
Y G +D++++ F MP ERN V+WN+++ GY KA+
Sbjct: 354 MYGKCGSIDNAEQAFNAMP-----------------ERNLVSWNALLGGYAHQGHANKAV 396
Query: 384 QLYMTMRKLA-IDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVD 441
L M A I + + ACS G L+ G ++ + + E LVD
Sbjct: 397 ALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVD 456
Query: 442 MYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+ R G + A + P ++ W AL+ HG L E + E D
Sbjct: 457 LLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELD 510
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 18/279 (6%)
Query: 297 MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+GR A+++ T + YN ++ YA ++ +K + E P RS+
Sbjct: 24 LGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSV---------- 73
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
VTW ++I+G VQN AL + M + TF + A + L
Sbjct: 74 -------VTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTT 126
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ LHA VK ++V+VG S+ DMYS+ G +NDA F + N+ W A ++
Sbjct: 127 GKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVL 186
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
HG ++V+ F +L P++ TF L+AC + G ++ + G +
Sbjct: 187 HGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSV 246
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++D G+ G + E E + D E ++V W +L++A
Sbjct: 247 SNGLIDFYGKCGEV-ECSEMVFDRMGERNSVSWSSLIAA 284
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 138/321 (42%), Gaps = 54/321 (16%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I G+ G++ + +FD+M R VSW++++ Y + + +++ L + ++
Sbjct: 247 SNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDI 306
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ + S++L CA L+ + G+ + L +K+ E FV S L+ Y C I+ A++
Sbjct: 307 EPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQ 366
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV--WTKLISGYAKSVDGC 198
F+ + E N + W+ +L GY + A + +M +V + LI ++ C
Sbjct: 367 AFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLIC----ALSAC 422
Query: 199 EKA------LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+A +K+F M+E P + ++ R G +++C ++F
Sbjct: 423 SRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAG-----------MVECAYDFI 471
Query: 253 E--------SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN-------------SLI 291
+ SI GAL+ GA R++ + E L A L
Sbjct: 472 KRMPFPPTISIWGALL----------GACRMHGKPELGKLAAEKLFELDPKDSGNHVVLS 521
Query: 292 NGLISMGRIEDAELIFNRLTE 312
N + GR E+ ++ N + E
Sbjct: 522 NMFAATGRWEEVTVVRNEMKE 542
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/517 (34%), Positives = 264/517 (51%), Gaps = 66/517 (12%)
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+AL L+ M G+ PN +TF +++CA L G HG + K G F+ + L
Sbjct: 32 QALSLYPQMLRHGDR-PNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGL 90
Query: 260 IEFYCGCEAFDGAMRVYD-----RLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-- 312
I YC D A +V++ R C NA L++G +S + +A L+F ++ E
Sbjct: 91 ISMYCKGSLVDNARKVFEENFHSRKLTVCYNA---LVSGYVSNSKCSEAVLLFRQMNEEG 147
Query: 313 --ANSISY-----------------------------------NSMIKGYAVYGQVDDSK 335
NS++ N I Y G V+ ++
Sbjct: 148 VPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQ 207
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
+LF++MP + +IS WN+M+SGY QN L L+LY M +
Sbjct: 208 KLFDEMPVKGLIS-----------------WNAMVSGYAQNGLATNVLELYRNMDMNGVH 250
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
T + +C+ LG+ G + + + F SN ++ +L++MY+RCG++ AQA
Sbjct: 251 PDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAV 310
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F + + +WTA++ GY HG G AV LF+ M+ I P+ FV VLSAC AGL
Sbjct: 311 FDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLT 370
Query: 516 NEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
++G++ F+ MK +Y + P EHY+C+VDLLGR+G L EA+ I+ MPI+ D VWGALL
Sbjct: 371 DQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 430
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
AC N+E+ E A +++ L+ + I YV+LSNIY+ + IR + ++KKD
Sbjct: 431 ACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKD 490
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTA 671
PGCS++EL RVH F V DRN+ + IY LE L A
Sbjct: 491 PGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEA 527
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 194/483 (40%), Gaps = 91/483 (18%)
Query: 52 WNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL 111
WNT L +K +F ++LSL M R + N TF L CA L+ I G Q H +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
K G FV +GL+ Y ++ A++VF+E N S
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEE-------------------NFHS---- 113
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
+K V + L+SGY S C +A+ LFR M E G + N T +I AC
Sbjct: 114 ------RKLTVCYNALVSGYV-SNSKCSEAVLLFRQMNEEGVPV-NSVTLLGLIPACVSP 165
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
G +H +K GF+ D S+ I Y C + + A +++D + L + N+++
Sbjct: 166 INLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMV 225
Query: 292 NGLISMGRIEDAELIFNRLT---------------------------------------E 312
+G G + ++ +
Sbjct: 226 SGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFT 285
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
+N N++I YA G + ++ +F+ MP R+++S W ++I G
Sbjct: 286 SNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVS-----------------WTAIIGG 328
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--E 430
Y + E A+QL+ M + I+ + F + ACS G QG L + ++K + E
Sbjct: 329 YGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQG-LEYFKMMKRNYQLE 387
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ +VD+ R G + +AQ S+ P+ A W AL+ H A L FE
Sbjct: 388 PGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFER 447
Query: 490 MLE 492
++E
Sbjct: 448 VIE 450
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/469 (21%), Positives = 188/469 (40%), Gaps = 88/469 (18%)
Query: 32 GQLV-TARNLFDQ--MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G LV AR +F++ + V +N ++ GY +K E++ L M+ V +N T
Sbjct: 97 GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLL 156
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++ C +L G +HC LK G++ V + + Y C + A+++FDE
Sbjct: 157 GLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDE---- 212
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
MP K ++ W ++SGYA++ L+L+R M
Sbjct: 213 ---------------------------MPVKGLISWNAMVSGYAQN-GLATNVLELYRNM 244
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+G + P+ T V+ +CA LGA G V + GF + + ALI Y C
Sbjct: 245 DMNGVH-PDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARC-- 301
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
G + A+ +F+ + E +S+ ++I GY ++
Sbjct: 302 -----------------------------GNLTKAQAVFDGMPERTLVSWTAIIGGYGMH 332
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY-M 387
G + + +LF++M I E + + ++S L ++ L+ + M
Sbjct: 333 GHGEIAVQLFKEMIRSGI-------------EPDGTAFVCVLSACSHAGLTDQGLEYFKM 379
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
R ++ +S + G L++ Q L + P + + V +L+
Sbjct: 380 MKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTL---IESMPIKPDGAVWGALLGACKIHK 436
Query: 448 SINDAQASFSSI---SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
++ A+ +F + N+ + L N YS+ S+ VL IM+++
Sbjct: 437 NVELAELAFERVIELEPENIGYYVLLSNIYSNAN-NSKGVLRIRIMMKE 484
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 3/212 (1%)
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WN+ + + +AL LY M + TF +C+ L G H +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSS--ISSPNVAAWTALMNGYSHHGLGSEA 483
K +V T L+ MY + +++A+ F S + AL++GY + SEA
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
VLLF M E+ + N+ T +G++ ACV + G + S YG + C + +
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G ++ A++ +MP++ + W A++S
Sbjct: 197 YMKCGSVNYAQKLFDEMPVK-GLISWNAMVSG 227
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 262/518 (50%), Gaps = 57/518 (11%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNE 218
Y + + +F + V WT +I G+A + G E+AL + M G PN
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHA--LRGLHEQALNFYAQMLTQGVE-PNA 75
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
+TF S+++ C GK +H +K GF+ D + L++ Y
Sbjct: 76 FTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYA-------------- 117
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLF 338
G + A+ +F+ + E + +S +M+ YA +G++D ++ LF
Sbjct: 118 -----------------RGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLF 160
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
+ M ER+ V WN MI GY QN + +AL L+ M K
Sbjct: 161 DGME-----------------ERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNE 203
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
T + AC LG+L+ G+ +H+++ + NV+VGT+LVDMYS+CGS+ DA+ F
Sbjct: 204 VTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDK 263
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
I +V AW +++ GY+ G EA+ LF+ M + P TF+G+LSAC +G V EG
Sbjct: 264 IDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEG 323
Query: 519 MKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
IF MK YG+ P +EHY C+V+LLGR+GH+ +A E +K+M IE D V+WG LL AC
Sbjct: 324 WDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACR 383
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
+ +GE+ + + + Y++LSNIYA +G W +R + VKK+PGC
Sbjct: 384 LHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGC 443
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
S IE+N++VH F N+P IY LE + L S
Sbjct: 444 SSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKS 481
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 188/392 (47%), Gaps = 27/392 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G+L + LF + +V W ++ G++ +++L+ + M V+ N TFS+IL
Sbjct: 23 GRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSIL 82
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+C + GK +H +K G++ +V +GLL YA ++ A+++FD + E + +
Sbjct: 83 KLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLV 138
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
+ ML Y + + A +F M ++D V W +I GY ++ E AL LFR M ++
Sbjct: 139 SLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNE-ALVLFRRMLKA 197
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
+ PNE T SV+ AC +LGA G+ VH + G +F+ +G AL++ Y C + +
Sbjct: 198 -KAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLED 256
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAV 327
A V+D++++ + A NS+I G G ++A +F + +I++ ++
Sbjct: 257 ARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGH 316
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM-ISGYVQNNLHEKALQLY 386
G V + +F KM I P++E N + +G+V+ Q Y
Sbjct: 317 SGWVTEGWDIFNKMKDEYGIE--------PKIEHYGCMVNLLGRAGHVE--------QAY 360
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
++ + I+ + L AC G + G+
Sbjct: 361 ELVKNMNIEPDPVLWGTLLGACRLHGKIALGE 392
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 53/289 (18%)
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
+ + + + YA G++D S LF + + S+ W ++I G+
Sbjct: 10 VPLDKLQRSYASLGRLDYSVALFGRTQNPSVF-----------------FWTAIIHGHAL 52
Query: 376 NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
LHE+AL Y M ++ TFS + C ++ G+ LH+ VK F+S++YV
Sbjct: 53 RGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYV 108
Query: 436 GTSLVDMYSRCGSINDAQASFSSISSPNVAA----------------------------- 466
T L+D+Y+R G + AQ F ++ ++ +
Sbjct: 109 RTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDG 168
Query: 467 --WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
W +++GY+ +G+ +EA++LF ML+ PN T + VLSAC + G + G +
Sbjct: 169 VCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSY 228
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+++ G+ + T +VD+ + G L +A + D + D V W +++
Sbjct: 229 IENNGIQFNVHVGTALVDMYSKCGSLEDA-RLVFDKIDDKDVVAWNSMI 276
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 155/341 (45%), Gaps = 66/341 (19%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS +T ++G+L AR LFD M R V WN M+ GY++ +E+L L
Sbjct: 134 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 193
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++ K NE T ++LS C QL +L G+ +H + +G + VG+ L+ Y+ C
Sbjct: 194 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 253
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+E+A+ VFD++ + + + W+ M+VGY + G++
Sbjct: 254 LEDARLVFDKIDDKDVVAWNSMIVGYA--------------------------MXGFS-- 285
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDE 253
++AL+LF+ M G + P TF ++ AC G EG + + + + G E
Sbjct: 286 ----QEALQLFKSMCRMGLH-PTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIE--- 337
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTE 312
IE Y GC ++N L G +E A EL+ N E
Sbjct: 338 ----PKIEHY-GC-----------------------MVNLLGRAGHVEQAYELVKNMNIE 369
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+ + + +++ ++G++ +++ E + +++ + T I
Sbjct: 370 PDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYI 410
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 264/493 (53%), Gaps = 45/493 (9%)
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T+ SV++ CA L + +G+ +H ++ E D +G L+ Y C R++D++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 280 ENPCLNASNSLINGLISMG------------------RIEDAELIFNRLTEANSISYNSM 321
N + N L+NG +G R+E A +F+ L + + IS+NSM
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIIS-------------------------LNTMISVI 356
I GY G + LFE+M I + LN+ I V
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVF 282
Query: 357 PEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
M ER+ V+W SMI+GY + L + +++L+ M K + T + + AC+ L +L+
Sbjct: 283 ETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALE 342
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+GQ +H H+++ F + +V +LVDMY +CG++ A+ F I ++ +WT ++ GY
Sbjct: 343 RGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYG 402
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV-PTL 534
HG GSEA+ F M I P+ +F+ +L AC +GL++EG F M++ + P
Sbjct: 403 MHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKS 462
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY C+VDLL R+G+L +A +FIK MPIE DA +WGALL C + ++++ E+ A+ +F
Sbjct: 463 EHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFE 522
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
L+ + YV+L+NIYA KW + +R+R+ ++K+PGCSWIE+ +VH F D
Sbjct: 523 LEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDS 582
Query: 655 NNPNCNVIYATLE 667
++P N I L+
Sbjct: 583 SHPLANKIELLLK 595
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 156/389 (40%), Gaps = 100/389 (25%)
Query: 49 VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHC 108
+ +N +C + + ++ L++ + +++L T+ ++L +CA L S+ DG++IH
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHS 125
Query: 109 LVLKSGYECFEFVGSGLLFFYANCFE---------------------------------- 134
++ + E +GS L+F Y C +
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRE 185
Query: 135 ---------------IEEAKRVFDELHEDNELLWSLMLVGYVQCNL-------------- 165
+E A+++FDEL + + + W+ M+ GYV L
Sbjct: 186 SLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLL 245
Query: 166 -----------------------------MSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
++ A VF M ++ VV WT +I+GYA+
Sbjct: 246 GINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYARE-G 304
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
+ +++LF M E + PN T ++ ACA L A G+ +HG +++ GF D +
Sbjct: 305 LSDMSVRLFHEM-EKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVA 363
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TE 312
AL++ Y C A A ++D + L + +I G G +A FN + E
Sbjct: 364 NALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 423
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ +S+ S++ + G +D+ F M
Sbjct: 424 PDEVSFISILYACSHSGLLDEGWGFFNMM 452
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 13/245 (5%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++G L +A +F+ M R+VVSW +M+ GY++ D S+ L M + ++ N T +
Sbjct: 271 KSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMAC 330
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
IL CA L +L G++IH +L++G+ V + L+ Y C + A+ +FD + E +
Sbjct: 331 ILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKD 390
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDG-CEKALKL 204
+ W++M+ GY S+A F +M + D V + ++ YA S G ++
Sbjct: 391 LVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISIL--YACSHSGLLDEGWGF 448
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F MR + P + ++ AR G + + + E D +I GAL+ C
Sbjct: 449 FNMMRNNCCIEPKSEHYACIVDLLARAGNLSKA---YKFIKMMPIEPDATIWGALL---C 502
Query: 265 GCEAF 269
GC +
Sbjct: 503 GCRIY 507
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/461 (32%), Positives = 256/461 (55%), Gaps = 19/461 (4%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P +TF S+++AC+ + G+ VHG + K GF+ + AL++FY A RV
Sbjct: 8 PTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEARRV 67
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
+D + + A ++I+ G + A +F+ + N+ S+N+MI GY+ V+ ++
Sbjct: 68 FDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAE 127
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
LF +MP+R IIS W +MI+ Y QN +AL ++ M+ ID
Sbjct: 128 LLFSQMPNRDIIS-----------------WTTMIACYSQNKQFREALAVFNEMQTNGID 170
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
T + + AC+ LG+L G+ +H + ++ F+ +VY+G++L+DMY++CGS++ +
Sbjct: 171 PDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVV 230
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F + N+ W +++ G + HG EA+ +F M + I PN TF+ VL AC AGLV
Sbjct: 231 FFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLV 290
Query: 516 NEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
EG K F SM + + + P +EHY C+VDLLG++G L +A E ++ M +E ++V+WGALL
Sbjct: 291 EEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLG 350
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK- 633
C N+++ + A + L+ Y +L N+YA + +W + +IR + L V+K
Sbjct: 351 GCKLHRNLKIAQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKT 410
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
PG SWIE++ ++H F+ D+++ + IY L L L
Sbjct: 411 SPGSSWIEMDRKIHQFAASDKSHLASDEIYTLLVELDGQLK 451
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 198/405 (48%), Gaps = 53/405 (13%)
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++ V TFS+++ C+ ++ L G+ +H + K G++ FV + L+ FY N +
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA-- 192
I EA+RVFDE+ E + W+ M+ + + MS A +F +MP ++ W +I GY+
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRL 120
Query: 193 KSVDGCE----------------------------KALKLFRWMRESGENMPNEYTFDSV 224
++V+ E +AL +F M+ +G + P+E T ++
Sbjct: 121 RNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGID-PDEVTMATI 179
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
I ACA LGA GK +H ++ GF+ D IG ALI+ Y C + D ++ V+ +L L
Sbjct: 180 ISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNL 239
Query: 285 NASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEK 340
NS+I GL G E+A +F+R+ + N +++ S++ G V++ ++ F
Sbjct: 240 FCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRF-- 297
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
+S++ S+ PE+E + M+ + L E AL+L +MR ++
Sbjct: 298 ------LSMSRDFSIPPEIEH----YGCMVDLLGKAGLLEDALELVRSMR---MEPNSVI 344
Query: 401 FSVLFHACSCLGSLQQGQL-LHAHLVKTPFESNVYVGTSLVDMYS 444
+ L C +L+ Q+ ++ V P S Y T LV+MY+
Sbjct: 345 WGALLGGCKLHRNLKIAQVAVNESKVLEPNNSGYY--TLLVNMYA 387
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N I R + +A LF QMP R ++SW TM+ YS+ +F E+L++ + M +
Sbjct: 109 SWNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNG 168
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ +E T +TI+S CA L +L GK+IH ++ G++ ++GS L+ YA C ++++
Sbjct: 169 IDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSL 228
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-C 198
VF K+ KK++ W +I G A V G
Sbjct: 229 VVF-------------------------------FKLRKKNLFCWNSIIEGLA--VHGYA 255
Query: 199 EKALKLF-RWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
E+AL +F R RE + PN TF SV+ AC G EG+
Sbjct: 256 EEALAMFSRMQREKIK--PNGVTFISVLGACTHAGLVEEGR 294
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 18/239 (7%)
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M + + T TFS L ACS + L G+ +H H+ K F+S+V+V T+LVD Y G
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
I +A+ F +S +V AWT +++ ++ G S A LF+ M V N A++ ++
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEM----PVRNTASWNAMIDG 116
Query: 509 CVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP---IELD 565
R V +F M + ++ +T ++ ++ EA +M I+ D
Sbjct: 117 YSRLRNVESAELLFSQMPNRDIIS----WTTMIACYSQNKQFREALAVFNEMQTNGIDPD 172
Query: 566 AVVWGALLSACWFWMNMEVGER----AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKM 620
V ++SAC +++G+ A + F LD SA + ++YA G K +
Sbjct: 173 EVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALI---DMYAKCGSLDKSL 228
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 199/666 (29%), Positives = 322/666 (48%), Gaps = 78/666 (11%)
Query: 52 WNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL 111
WN+++ + +L+ + M V N TF +L CA L L+ Q+H +
Sbjct: 21 WNSLIAKNAT-QNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLT 79
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
+ G F + L+ Y C A +VFDE+ E +
Sbjct: 80 RLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGS---------------------- 117
Query: 172 VFIKMPKKDVVVWTKLISGYAKS--VDGCEKALKLFRWMR--ESGENMP-NEYTFDSVIR 226
DVV WT LIS Y+ + VD A RWMR + E + + +++
Sbjct: 118 -------VDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVS 170
Query: 227 ACA-RLGAFC--EGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYD--RLEN 281
ACA G+ C G VHGL++K GF +G +++ Y C+ GA RV++ +E
Sbjct: 171 ACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQ 230
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLT-------EANSISYNSMIKGYAVYGQVDDS 334
+ + NSLI+G G E A F + E N ++ +++K A G V+ S
Sbjct: 231 RDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETS 290
Query: 335 KRLFEKMP--HRSIISLNTMISVIPEME--------------------RNPVTWNSMISG 372
+ E + H S++ ++ + ++ +N V W++MI+G
Sbjct: 291 SWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAG 350
Query: 373 YVQNNLHEKALQLYM------TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
Y Q + E+AL+L+ M + + T + ACS LG+ + ++H + V
Sbjct: 351 YEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVA 410
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSI--SSPNVAAWTALMNGYSHHGLGSEAV 484
T + + + ++L+DM ++CG I + FS + S+ V +W++++ HG G A+
Sbjct: 411 TGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRAL 470
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDL 543
LF M PN T++ VLSAC AGLV +G F SM K YG+ PT +HY C+VDL
Sbjct: 471 ELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDL 530
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
LGR+GHL EA I +MPI+ D +WG+LL+AC N ++GE +K+ LD + +
Sbjct: 531 LGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHH 590
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
V+L+N+Y G+W + +R L ++K PG S+IE+ + V++F EDR++P +IY
Sbjct: 591 VLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIY 650
Query: 664 ATLEHL 669
L+ L
Sbjct: 651 KELDGL 656
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 193/451 (42%), Gaps = 55/451 (12%)
Query: 176 MPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP-NEYTFDSVIRACARLGAF 234
+ KD W LI+ A + AL F R +P N +TF ++++ACA L
Sbjct: 13 ISHKDTFHWNSLIAKNA--TQNPQTALTFF--TRMQAHAVPSNNFTFPALLKACAALRRL 68
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN--SLIN 292
VH L + G D AL++ Y C A +V+D + ++ + +LI+
Sbjct: 69 LPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALIS 128
Query: 293 GLISMGRIEDAELIFNRL------------------------TEANSISYNSMIKGYAVY 328
S G +++A F R+ A N + +G AV+
Sbjct: 129 AYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVH 188
Query: 329 GQVDD-----SKRLFEKMPH-----RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
G V S L M H + + + + IP +R+ V+WNS+ISG+ N
Sbjct: 189 GLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGE 248
Query: 379 HEKALQLYMTM---RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP----FES 431
E+AL+ + M A++ R T L +C+ LG ++ +H ++
Sbjct: 249 AERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAK 308
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+V V T+L+DM++RCG++ A+ F + NV W+A++ GY EA+ LF ML
Sbjct: 309 DVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQML 368
Query: 492 EQ------DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
+ ++ PNA T V V++AC R G I + + G+ + ++D+
Sbjct: 369 MEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCA 428
Query: 546 RSGHLHEAEEFIKDMPIELDAVV-WGALLSA 575
+ G + + +M VV W +++ A
Sbjct: 429 KCGDIEHGRQVFSEMDESTRTVVSWSSMIGA 459
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 117/507 (23%), Positives = 201/507 (39%), Gaps = 94/507 (18%)
Query: 29 GRNGQLVTARNLFDQMPIRTV--VSWNTMLCGYSKWAKFDESLSLVSTMH-------RSN 79
G+ G A +FD+MP +V VSW ++ YS DE+ M
Sbjct: 98 GKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSEC 157
Query: 80 VKLNETTFSTILSVCA---QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
++ + ++S CA N L G +H LV+K G+ +G+ ++ Y+ C ++
Sbjct: 158 CGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVG 217
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A RVF+ I + ++DVV W LISG+ + +
Sbjct: 218 GAWRVFNG-----------------------------IPIEQRDVVSWNSLISGFXLNGE 248
Query: 197 GCEKALKLFRWMRESGENM--PNEYTFDSVIRACARLGAFCEGKVVH--------GLLIK 246
E+AL+ F M G + PN T +++++CA LG VH LL+
Sbjct: 249 A-ERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVA 307
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
D + AL++ + C A ++D +E + +++I G E+A +
Sbjct: 308 ----KDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRL 363
Query: 307 FNR-LTEANSISYN------------------------SMIKGYAVYGQVDDSKRLFEKM 341
F + L E N + SMI YAV +D R+ +
Sbjct: 364 FRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASAL 423
Query: 342 PHR-----SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
I + S + E R V+W+SMI + ++AL+L+ MR +
Sbjct: 424 IDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEP 483
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDA 452
T+ + ACS G ++QG+ + K +P + LVD+ R G +++A
Sbjct: 484 NEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHY---ACLVDLLGRAGHLDEA 540
Query: 453 QASFSSIS-SPNVAAWTALMNGYSHHG 478
++ ++A W +L+ HG
Sbjct: 541 HNVILNMPIKADLALWGSLLAACHLHG 567
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 176/467 (37%), Gaps = 109/467 (23%)
Query: 37 ARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLVSTM---HRSNVKLNETTFSTIL 91
A +F+ +PI R VVSWN+++ G+ + + +L M S V+ N T +L
Sbjct: 219 AWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALL 278
Query: 92 SVCAQLNSLIDGKQIH---------CLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
CA+L + +H LV K V + LL +A C + A+ +F
Sbjct: 279 KSCAELGCVETSSWVHEYISSRHSSLLVAKD-----VVVLTALLDMHARCGNLALAREIF 333
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
D + N + WS M+ GY Q + P E+AL
Sbjct: 334 DGVEGKNVVCWSAMIAGYEQGSC-----------P---------------------EEAL 361
Query: 203 KLFRWMRESG-----ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+LFR M G E PN T SVI AC+RLGA ++H + G + D I
Sbjct: 362 RLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIAS 421
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS-- 315
ALI+ C G IE +F+ + E+
Sbjct: 422 ALIDMCAKC-------------------------------GDIEHGRQVFSEMDESTRTV 450
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQ 375
+S++SMI ++G+ + LF +M E N +T+ S++S
Sbjct: 451 VSWSSMIGAEGIHGEGKRALELFSEMR-------------TGGYEPNEITYISVLSACSH 497
Query: 376 NNLHEKALQLYMTMRK-LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
L E+ + +M K + T ++ L G L + H ++ P ++++
Sbjct: 498 AGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEA---HNVILNMPIKADLA 554
Query: 435 VGTSLV---DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+ SL+ ++ C + S+ S +V L N Y G
Sbjct: 555 LWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAG 601
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 148/360 (41%), Gaps = 63/360 (17%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN------VKLN 83
R G L AR +FD + + VV W+ M+ GY + + +E+L L M VK N
Sbjct: 322 RCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPN 381
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
T ++++ C++L + IH + +G + + S L+ A C +IE ++VF
Sbjct: 382 AVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFS 441
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
E+ E + VV W+ +I +G ++AL+
Sbjct: 442 EMDEST-----------------------------RTVVSWSSMIGAEGIHGEG-KRALE 471
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
LF MR G PNE T+ SV+ AC+ G +GK + E D + +
Sbjct: 472 LFSEMRTGGYE-PNEITYISVLSACSHAGLVEQGKSCFNSM-----EKDYGMSPTGKHYA 525
Query: 264 CGCEAFDGAMRVYDRLENPCLNAS--------NSLINGLISMGRIEDAELIFNRL--TEA 313
C + A + D N LN SL+ G + E++ ++ ++
Sbjct: 526 CLVDLLGRAGHL-DEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDS 584
Query: 314 NSISYNSMIKG-YAVYGQVDDSKRL--------FEKMPHRSIISL-NTMISVIPEMERNP 363
NS+ ++ ++ Y G+ DD R+ K+P +S I + N + S + E +P
Sbjct: 585 NSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHP 644
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 10 TLMTQETLIVSTNKAITECGRNGQLVTARNLFDQM--PIRTVVSWNTMLCGYSKWAKFDE 67
T + Q+ I S I C + G + R +F +M RTVVSW++M+ +
Sbjct: 411 TGLDQDARIASA--LIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKR 468
Query: 68 SLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
+L L S M + NE T+ ++LS C+ + GK
Sbjct: 469 ALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGK 505
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 196/670 (29%), Positives = 325/670 (48%), Gaps = 60/670 (8%)
Query: 34 LVTARNLFDQMP--IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL-NETTFSTI 90
L A +F +P +R V SWN++L S+ S M ++ L +F+ +
Sbjct: 67 LGAAFAVFADIPAGLRDVASWNSLLNPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAV 126
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
+ A++ S G H + C SG +N
Sbjct: 127 FTAAARVPSASAGAVAH------AFACKLPSSSG----------------------SNNV 158
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ + +L Y + +SDA VF +MP ++ V W ++SGYA E+A +LFR M +
Sbjct: 159 FVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATG-KCSEEAFELFRLMLQ 217
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
NE+ +V+ A + G +HGL++K G S+ +L+ Y E D
Sbjct: 218 ECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMD 277
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN--------------SI 316
AM V+ + +++I G G + A +F ++ A S
Sbjct: 278 AAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASS 337
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPH--RSIISLNTMISVIPEMER---------NPVT 365
+++ G +G + K FE+ + +++ + + + + V
Sbjct: 338 DMGALVVGKQAHGLM--VKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVI 395
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
W +MI+G+VQN HE+AL LY M K + + T + + AC+CL +L+ G+ LHA ++
Sbjct: 396 WTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQIL 455
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K F VGT+L MYS+CG++ D+ F + ++ +W ++++G+S HG G +A+
Sbjct: 456 KCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALD 515
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
LFE M + I P+ TF+ VL AC GLV+ G FR+M K YG++P L+HY C+VD+L
Sbjct: 516 LFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDIL 575
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
R+G L EA++FI+ + I+ +W +L AC + +VG A +++ L + SAY+
Sbjct: 576 SRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYI 635
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+LSNIYA KW +R + V KDPGCSW+ELN++V+ F V ++ +P I
Sbjct: 636 LLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQVNVFVVGEQQHPEAEKINV 695
Query: 665 TLEHLTANLN 674
L L ++
Sbjct: 696 ELIRLAKHMK 705
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 205/457 (44%), Gaps = 64/457 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFSTI 90
G + AR +FDQMP R VSW M+ GY+ +E+ L M ++ NE + +
Sbjct: 172 GAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAV 231
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
LS + L+ G Q+H LVLK G F V + L+ YA ++ A VF E N
Sbjct: 232 LSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNS 291
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ WS M+ GY Q A +F++M +G++
Sbjct: 292 ITWSAMITGYAQNGEADCAATMFLQMHS----------AGFS------------------ 323
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY--CGC-- 266
P E+TF ++ A + +GA GK HGL++K GFE + AL++ Y CGC
Sbjct: 324 -----PTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTG 378
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMI 322
+A DG ++YD + A +I G + G E+A ++++R+ + + ++ S++
Sbjct: 379 DAKDGFHQLYDVDDVVIWTA---MITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVL 435
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSI-------ISLNTMISVIPEME-----------RNPV 364
+ A ++ K+L ++ +L+TM S +E R+ +
Sbjct: 436 RACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDII 495
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+WNS+ISG+ Q+ AL L+ M+ I TF + ACS +G + +G +
Sbjct: 496 SWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAM 555
Query: 425 VKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
K + +VD+ SR G + +A+ SI+
Sbjct: 556 SKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIESIT 592
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 200/442 (45%), Gaps = 35/442 (7%)
Query: 165 LMSDAFDVFIKMPK--KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN-MPNEYTF 221
L+ AF VF +P +DV W L++ ++ AL FR M S + +P ++F
Sbjct: 66 LLGAAFAVFADIPAGLRDVASWNSLLNPLSRHQP--LAALSHFRSMMSSTDAVLPTPHSF 123
Query: 222 DSVIRACARLGAFCEGKVVHGLLIKCGFEFDES---IGGALIEFYCGCEAFDGAMRVYDR 278
+V A AR+ + G V H K + + AL+ YC A A RV+D+
Sbjct: 124 AAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQ 183
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLF 338
+ + + ++++G + E+A +F + + + N + AV V L
Sbjct: 184 MPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFV-ATAVLSAVSVPLGLL 242
Query: 339 EKMPHRSII-------------SLNTMISVIPEM-----------ERNPVTWNSMISGYV 374
+ ++ SL TM + M ERN +TW++MI+GY
Sbjct: 243 IGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYA 302
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
QN + A +++ M T TF + +A S +G+L G+ H +VK FE VY
Sbjct: 303 QNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVY 362
Query: 435 VGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
V ++LVDMY++CG DA+ F + +V WTA++ G+ +G EA++L+ M ++
Sbjct: 363 VKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKE 422
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
++P+ T VL AC + G ++ + G T + + + G+L ++
Sbjct: 423 GVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDS 482
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
+ MP + D + W +++S
Sbjct: 483 MVVFRRMP-DRDIISWNSIISG 503
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 26 TECGRNGQLVTARNLFDQM-PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
+CG G A++ F Q+ + VV W M+ G+ + + +E+L L S M + V +
Sbjct: 372 AKCGCTGD---AKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSY 428
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
T +++L CA L +L GKQ+H +LK G+ VG+ L Y+ C +E++ VF
Sbjct: 429 LTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRR 488
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM 176
+ + + + W+ ++ G+ Q DA D+F +M
Sbjct: 489 MPDRDIISWNSIISGFSQHGRGRDALDLFEEM 520
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 21/183 (11%)
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS----INDAQASFSSISSP 462
A S + + + G LH +K+ S+ V SL+ Y C + A A F+ I +
Sbjct: 23 AASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFY--CSPPRPLLGAAFAVFADIPAG 80
Query: 463 --NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD-IVPNAATFVGVLSACVR-----AGL 514
+VA+W +L+N S H + +M D ++P +F V +A R AG
Sbjct: 81 LRDVASWNSLLNPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGA 140
Query: 515 VNEGM--KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
V K+ S S V + T ++++ + G + +A MP +AV W A+
Sbjct: 141 VAHAFACKLPSSSGSNNVFVS----TALLNMYCKLGAISDARRVFDQMP-HRNAVSWAAM 195
Query: 573 LSA 575
+S
Sbjct: 196 VSG 198
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 190/635 (29%), Positives = 316/635 (49%), Gaps = 58/635 (9%)
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG---KQIHCLVLKSGYECFEFV 121
+ SL+L + + + NE+TF + ++ I QI+ +L +G + F+
Sbjct: 50 YSSSLNLTTHFNNNKDDCNESTFKPDKFYASLIDDSIHKTHLNQIYAKLLVTGLQYGGFL 109
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+ L+ +N E+ A+++FD+ + + LW+ ++ Y + A +++ +M V
Sbjct: 110 IAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACV 169
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
P+ ++F V++AC+ L A G+ VH
Sbjct: 170 ---------------------------------SPDGFSFPCVLKACSALPALEMGRRVH 196
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
G + + GFE D + L+ Y C A V+ RL + + + S+I+G G+
Sbjct: 197 GQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPI 256
Query: 302 DAELIFNRLTEANS----ISYNSMIKGYAVYGQVDDSKRLFE---KMPHRS----IISLN 350
+A IF+ + + N I+ S+++ Y ++ K + KM +ISL
Sbjct: 257 EALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLT 316
Query: 351 TMIS---------VIPEMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
++ + + NP + WN+MISGYV+N E+A++L+ M+ I
Sbjct: 317 SLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSI 376
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T + AC+ +GSL+ + + ++ + F ++V V TSL+D Y++CGS++ A+ F I
Sbjct: 377 TVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRI 436
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+V W+A+M GY HG G E+++LF M + + PN TFVG+L+AC +GLV EG
Sbjct: 437 PDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGW 496
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
+F M+ YG+ P +HY CVVDLLGR+GHL A F+ +MPIE VWGALLSAC
Sbjct: 497 DLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIH 556
Query: 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSW 639
++ +GE AA+++F LD YV LSN+YA W +R + + K G S
Sbjct: 557 RHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSV 616
Query: 640 IELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
IE+N ++ AF D+ +P I+ +E L L
Sbjct: 617 IEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLK 651
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 211/489 (43%), Gaps = 63/489 (12%)
Query: 23 KAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL 82
K + + G++ AR LFD+ P V WN ++ YS+ F ++ + + M + V
Sbjct: 112 KLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSP 171
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
+ +F +L C+ L +L G+++H + + G+E FV +GL+ YA C EI A VF
Sbjct: 172 DGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVF 231
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
L + + W+ ++ GY Q +A +F +M K +V
Sbjct: 232 GRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNV--------------------- 270
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
P+ SV+RA + GK +HG +IK G E + + +L
Sbjct: 271 ------------RPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSL 318
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISY 318
Y C A ++++ENP L N++I+G + G E+A +F + N SI+
Sbjct: 319 YAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITV 378
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMP---HRSIISLNT-----------------MISVIPE 358
S I A G ++ ++ + E + R+ + +NT + IP
Sbjct: 379 TSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIP- 437
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+++ V W++M+ GY + +++ L+ MR+ + TF L AC G +++G
Sbjct: 438 -DKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGW 496
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG---Y 474
L + E +VD+ R G ++ A ++ P V+ W AL++ +
Sbjct: 497 DLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIH 556
Query: 475 SHHGLGSEA 483
H LG A
Sbjct: 557 RHVTLGEYA 565
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 182/427 (42%), Gaps = 82/427 (19%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + N + + G++V A +F ++ RT+VSW +++ GY++ + E+L + S
Sbjct: 205 ESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSE 264
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYEC-FEFVGSGLLFFYANCF 133
M ++NV+ + ++L + L GK IH V+K G EC F+ + S L YA C
Sbjct: 265 MRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLIS-LTSLYAKCG 323
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+ A+ F+++ + + W+ M+ GYV+ +GYA
Sbjct: 324 HVMVARLFFNQVENPSLIFWNAMISGYVK--------------------------NGYA- 356
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
E+A++LFR M+ S P+ T S I ACA++G+ + + + F D
Sbjct: 357 -----EEAIELFRLMK-SKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDV 410
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
+ +LI+ Y C G + M R +F+R+ +
Sbjct: 411 IVNTSLIDTYAKC--------------------------GSVDMAR-----FVFDRIPDK 439
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
+ + +++M+ GY ++GQ +S LF M + N VT+ +++
Sbjct: 440 DVVVWSAMMVGYGLHGQGRESIILFHAMRQAGV-------------SPNDVTFVGLLTAC 486
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
+ L E+ L+ MR I+ ++ + G L + + ++ P E V
Sbjct: 487 KNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRA---YNFVMNMPIEPGV 543
Query: 434 YVGTSLV 440
V +L+
Sbjct: 544 SVWGALL 550
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 196/636 (30%), Positives = 326/636 (51%), Gaps = 62/636 (9%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
++ A+ +F+ + R +V WN ML G+++ E + S M R + +E TF++I S
Sbjct: 359 KMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFS 418
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
CA L+ L G Q+H +++K+ + FV + L+ YA ++EA++ F+
Sbjct: 419 ACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFE--------- 469
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
LM + D V W +I GY + + ++A +FR M +G
Sbjct: 470 --LMKI--------------------HDNVSWNAIIVGYVQE-EYNDEAFFMFRRMVSNG 506
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+P+E + S++ ACA + G+ H LL+K G + G +LI+ Y C A
Sbjct: 507 V-LPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAA 565
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKG---- 324
V+ + + + + N+LI G +MG +E+A +F + + +++ ++ G
Sbjct: 566 RDVFYSMPSRNVVSVNALIAGY-TMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGA 624
Query: 325 ------YAVYGQVDDSKRLFEK-----------MPHRSIISLNTMISVIPEMERNPVTWN 367
++GQV L M + + T+ S + + + V W
Sbjct: 625 FMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSEL-QYPKGLVVWT 683
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
++ISGY Q N HEKALQ Y MR I ++ F+ + AC+ + SLQ GQ +H+ + T
Sbjct: 684 ALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHT 743
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN-VAAWTALMNGYSHHGLGSEAVLL 486
F + +SL+DMY++CG + + F + N V +W +++ G + +G EA+ +
Sbjct: 744 GFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEI 803
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLG 545
F+ M +Q I+P+ TF+GVLSAC AG V+EG K+F M +Y ++P ++H C+VD+LG
Sbjct: 804 FKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCMVDILG 863
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R G L+EAEEFI + + D ++W LL AC + G+RAA K+ L + S+YV+
Sbjct: 864 RWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSYVL 923
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
LS+IYA W + +R+ + VKK PG SWIE
Sbjct: 924 LSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIE 959
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 155/620 (25%), Positives = 270/620 (43%), Gaps = 97/620 (15%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A+ F ++ + V +WN++L Y F + M V+ NE TF+ +L
Sbjct: 90 GNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVL 149
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S C+ L + G+Q+HC V K+G+ F GL+ YA C + +A+ VFD + +
Sbjct: 150 SACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTV 209
Query: 152 LWSLMLVGYVQCNL-----------------------------------MSDAFDVFIKM 176
W+ ++ GYV+ ++DA +F ++
Sbjct: 210 SWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQI 269
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
P +VV W +ISG+AK E+A+ F ++++G + SV+ A A L
Sbjct: 270 PNPNVVAWNVMISGHAKR-GFAEEAISFFLELKKTGLK-ATRSSLGSVLSAIASLSMLNY 327
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
G +VH K G + + +G AL+ Y C D A +V++ L + N+++ G
Sbjct: 328 GSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ 387
Query: 297 MGRIEDA---------------ELIFNRLTEA------------------------NSIS 317
G ++ E F + A N
Sbjct: 388 NGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFV 447
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
N+++ YA G + ++++ FE M ++ N V+WN++I GYVQ
Sbjct: 448 ANALVDMYAKSGALKEARKQFELM----------------KIHDN-VSWNAIIVGYVQEE 490
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+++A ++ M + + + + AC+ + L++GQ H LVK +++ G+
Sbjct: 491 YNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGS 550
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SL+DMY +CG + A+ F S+ S NV + AL+ GY+ L EA+ LF+ + + P
Sbjct: 551 SLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHL-EEAIHLFQEIQMVGLKP 609
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV--VDLLGRSGHLHEAEE 555
TF G+L C A ++N G +I + +G + + E CV + L S ++E
Sbjct: 610 TEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSE-MVCVSLLCLYMNSQRFVDSET 668
Query: 556 FIKDMPIELDAVVWGALLSA 575
++ VVW AL+S
Sbjct: 669 LFSELQYPKGLVVWTALISG 688
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 215/481 (44%), Gaps = 55/481 (11%)
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L +L K IH LK G +G+ ++ Y C ++ A++ F L + + W+ +
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
L Y+ L + F+ M W E P
Sbjct: 114 LSMYLDHGLFATVVQSFVCM-------WNH--------------------------EVRP 140
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
NE+TF V+ AC+ L G+ VH + K GF F G LI+ Y C A V+
Sbjct: 141 NEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVF 200
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVD 332
D N + +LI G + G +A +F+R+ + I+ +++ Y G++
Sbjct: 201 DGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLA 260
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
D+++LF ++P+ ++ V WN MISG+ + E+A+ ++ ++K
Sbjct: 261 DARKLFTQIPNPNV-----------------VAWNVMISGHAKRGFAEEAISFFLELKKT 303
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ TRS+ + A + L L G ++HA K + NVYVG++LV+MY++C ++ A
Sbjct: 304 GLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAA 363
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ F+S+ N+ W A++ G++ +GL E + F M P+ TF + SAC
Sbjct: 364 KQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASL 423
Query: 513 GLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+N G ++ M L +VD+ +SG L EA + + M I D V W A+
Sbjct: 424 HYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIH-DNVSWNAI 482
Query: 573 L 573
+
Sbjct: 483 I 483
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/603 (23%), Positives = 268/603 (44%), Gaps = 100/603 (16%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
Q TL+ N + G+L AR LF Q+P VV+WN M+ G++K +E++S
Sbjct: 243 QITLVTVVNAYVAL----GRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFL 298
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+ ++ +K ++ ++LS A L+ L G +H K G + +VGS L+ YA C
Sbjct: 299 ELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCS 358
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+++ AK+VF+ L E N +LW+ ML G+ Q L
Sbjct: 359 KMDAAKQVFNSLGERNIVLWNAMLGGFAQNGL---------------------------- 390
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
++ ++ F M+ G P+E+TF S+ ACA L G +H ++IK F +
Sbjct: 391 ----AQEVMEFFSCMKRHGPQ-PDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNL 445
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-- 311
+ AL++ Y A A + ++ ++ + N++I G + ++A +F R+
Sbjct: 446 FVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSN 505
Query: 312 -------------------------------------EANSISYNSMIKGYAVYGQVDDS 334
+ ++ + +S+I Y G V +
Sbjct: 506 GVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAA 565
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+ +F MP R+++S+ N++I+GY +L E+A+ L+ ++ + +
Sbjct: 566 RDVFYSMPSRNVVSV-----------------NALIAGYTMGHL-EEAIHLFQEIQMVGL 607
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGSINDAQ 453
T TF+ L C L G+ +H ++K F S+ V SL+ +Y D++
Sbjct: 608 KPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSE 667
Query: 454 ASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
FS + P + WTAL++GY+ +A+ ++ M +I+P+ A F VL AC
Sbjct: 668 TLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGM 727
Query: 513 GLVNEGMKIFRSMKSYGVVPTLEHYTC--VVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
+ G +I + G ++ TC ++D+ + G + + + ++MP + + W
Sbjct: 728 SSLQNGQEIHSLIFHTGF--NMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWN 785
Query: 571 ALL 573
+++
Sbjct: 786 SMI 788
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/521 (24%), Positives = 218/521 (41%), Gaps = 96/521 (18%)
Query: 4 YATQSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+ Q T+M + + N + ++G L AR F+ M I VSWN ++ GY
Sbjct: 428 FGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYV 487
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ DE+ + M + V +E + ++I+S CA + L G+Q HCL++K G +
Sbjct: 488 QEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTC 547
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
GS L+ Y V+C ++ A DVF MP ++
Sbjct: 548 AGSSLIDMY-------------------------------VKCGVVLAARDVFYSMPSRN 576
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
VV LI+GY ++ E+A+ LF+ ++ G P E TF ++ C G+ +
Sbjct: 577 VVSVNALIAGY--TMGHLEEAIHLFQEIQMVGLK-PTEVTFAGLLDGCDGAFMLNLGRQI 633
Query: 241 HGLLIKCGF-------------------EFDES--------------IGGALIEFYCGCE 267
HG ++K GF F +S + ALI Y
Sbjct: 634 HGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQN 693
Query: 268 AFDGAMRVYDRLEN----PCLNASNSLINGLISMGRIEDAE----LIFNRLTEANSISYN 319
+ A++ Y + + P A S++ M +++ + LIF+ + ++ +
Sbjct: 694 HHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCS 753
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
S+I YA G V S ++F +MP R+ N ++WNSMI G +N
Sbjct: 754 SLIDMYAKCGDVKGSLQVFREMPRRN----------------NVISWNSMIVGLAKNGYA 797
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTS 438
E+AL+++ M + +I TF + ACS G + +G+ + +V V
Sbjct: 798 EEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGC 857
Query: 439 LVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
+VD+ R G +N+A+ + + + W+ L+ HG
Sbjct: 858 MVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHG 898
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L +L +++H+ +K +G +VD+Y +CG+++ AQ +FS + +V AW ++
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
++ Y HGL + V F M ++ PN TF VLSAC VN G ++ + G
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC---WFWMN-MEVGE 586
++D+ + +L +A + D + LD V W AL++ F M ++V +
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDA-RLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFD 232
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
R + D+ + V + N Y LG+ D RK T +
Sbjct: 233 RMQRVGHAPDQITL---VTVVNAYVALGRLA---DARKLFTQI 269
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 242/469 (51%), Gaps = 49/469 (10%)
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
R + +G P+ YTF ++R A+L A G VHG +K GFE+D + LI Y
Sbjct: 99 RILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAE 158
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
D RV F+ + E + + +M+
Sbjct: 159 LGGLDACHRV-------------------------------FSSICEPDLVCQTAMVSAC 187
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
A G V +++LF+KM H+ +P+ WN+MISGYVQ +AL L
Sbjct: 188 AKMGDVGFARKLFDKMSHK-----------------DPIAWNAMISGYVQCGQSREALSL 230
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ M++ + + + ACS LG+L QG+ HA++ + + +GT+L+DMY++
Sbjct: 231 FNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAK 290
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CG++N A F + NV W++ + G + +G G + + LF +M + + PN TFV V
Sbjct: 291 CGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSV 350
Query: 506 LSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
L C GLV EG K F SM K YG+ P LEHY C+VDL GR+GHL EA FI MP+
Sbjct: 351 LRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRP 410
Query: 565 DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRK 624
WGALL+AC + NME+GE A++K+ L+ K AYV+LSNIYA W + ++R+
Sbjct: 411 HVGAWGALLNACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQ 470
Query: 625 RLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ V+K PGCS IE+ VH F V D+++P I L ++ L
Sbjct: 471 TMNVKGVRKQPGCSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRL 519
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 184/396 (46%), Gaps = 23/396 (5%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL--NETTFSTILSVC 94
+ + D T+ ++N+M+ +SK + S S + S L + TF+ ++
Sbjct: 62 SNQVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTS 121
Query: 95 AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
AQL + G +H +K G+E V SGL++ YA ++ RVF + E + + +
Sbjct: 122 AQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQT 181
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN 214
M+ + + A +F KM KD + W +ISGY + E AL LF M+ G
Sbjct: 182 AMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSRE-ALSLFNLMQREGVK 240
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
+ NE + SV+ AC+ LGA +G+ H + + ++G ALI+ Y C + AM
Sbjct: 241 V-NEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAME 299
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQ 330
V+ ++ + +S I GL G E +F+ + + N I++ S+++G +V G
Sbjct: 300 VFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGL 359
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
V++ ++ FE S++ + + P +E + M+ Y + ++AL +M
Sbjct: 360 VEEGRKHFE--------SMSKVYGIEPRLEH----YGCMVDLYGRAGHLDEALNFINSM- 406
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+ + L +AC +++ G+L +V+
Sbjct: 407 --PVRPHVGAWGALLNACKIYRNMEMGELASRKIVE 440
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 145/325 (44%), Gaps = 35/325 (10%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +V ++ C + G + AR LFD+M + ++WN M+ GY + + E+LSL +
Sbjct: 174 EPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNL 233
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M R VK+NE + ++LS C+ L +L G+ H + ++ +G+ L+ YA C
Sbjct: 234 MQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGN 293
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+ +A VF W M +K+V W+ I G A +
Sbjct: 294 MNKAMEVF----------WG---------------------MKEKNVYTWSSAIGGLAMN 322
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKC-GFEFDE 253
G EK L+LF M++ PNE TF SV+R C+ +G EG+ + K G E
Sbjct: 323 GAG-EKCLELFSLMKQDSVQ-PNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRL 380
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
G +++ Y D A+ + + P + A +L+N +E EL ++ E
Sbjct: 381 EHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNMEMGELASRKIVE 440
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRL 337
+ ++ + + +Y D R+
Sbjct: 441 LEAKNHGAYVLLSNIYADSKDWDRV 465
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 290/548 (52%), Gaps = 62/548 (11%)
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMR 209
L++ ++ Y + + ++ A + P + VV WT LI+G + +GC AL F M
Sbjct: 43 FLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQ--NGCFVSALLHFSDML 100
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
S PN++TF V++A L GK +H L +K G D +G ++ + Y
Sbjct: 101 -SDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFL 159
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISY------- 318
+ A +V+D + + L N+ I+ + GR ED+ + F L + +SI++
Sbjct: 160 NDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNAC 219
Query: 319 ----------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
N +I Y G+V+ S+ +F++M
Sbjct: 220 SDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMG-------- 271
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
ERN V+W+S+I+ YVQNN EKA L++ RK I+ T S + AC+
Sbjct: 272 ---------ERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAG 322
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L ++ G+ + A VK E N++V ++LVDMY +CGSI++A+ +F+++ N+ +W AL
Sbjct: 323 LSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNAL 382
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-Y 528
+ GY+H G ++AV L E M IVP+ + + LSAC RAG + GMKIF SMK Y
Sbjct: 383 LGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERY 442
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
GV P EHY C+VDLLGR+G + A +FIK MP +WGALL AC E+G+ A
Sbjct: 443 GVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLA 502
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A+K+F LD K +V+LSN++A G+W + +R + + +KK G SWI ++SR+H
Sbjct: 503 AEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHM 562
Query: 649 FSVEDRNN 656
F +D+++
Sbjct: 563 FQAKDKSH 570
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 188/459 (40%), Gaps = 65/459 (14%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECG------RNGQLVTARNLFDQMPIRTVVSWNT 54
M Q L +E LI N C + G L A +FD+MP R + +WN
Sbjct: 123 MDTTGKQLHALAVKEGLI---NDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNA 179
Query: 55 MLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG 114
+ + ++S+ + R K + TF L+ C+ L G Q+H +++SG
Sbjct: 180 YISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSG 239
Query: 115 YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI 174
Y V +GL+ FY C E+E ++ VFD + E N + WS ++ YVQ N A +F+
Sbjct: 240 YGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFL 299
Query: 175 KMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAF 234
+ K+D+ P ++ SV+ ACA L
Sbjct: 300 RARKEDI---------------------------------EPTDFMVSSVLCACAGLSEI 326
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
G+ V L +K E + + AL++ Y C + D A + ++ + L + N+L+ G
Sbjct: 327 EFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGY 386
Query: 295 ISMGRIEDAELIFNRLTEANSI--SYNSMIKGYAVYGQVDDSK---RLFEKMPHRSIISL 349
G A + +T A I SY S+I + + D K ++FE M R +
Sbjct: 387 AHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGV-- 444
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
E P + ++ + + E A Y ++++ T S + L AC
Sbjct: 445 ----------EPGPEHYACLVDLLGRAGMVECA---YDFIKRMPFPPTISIWGALLGACR 491
Query: 410 CLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCG 447
G + G+L L + P +S +V L +M++ G
Sbjct: 492 MHGKPELGKLAAEKLFELDPKDSGNHV--VLSNMFAATG 528
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 118/534 (22%), Positives = 196/534 (36%), Gaps = 94/534 (17%)
Query: 5 ATQSQTLMTQETLIVS--TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
A +Q L T +T + N + + L +A+ + + P R+VV+W ++ G +
Sbjct: 27 AAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQN 86
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
F +L S M V+ N+ TF +L L GKQ+H L +K G FVG
Sbjct: 87 GCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVG 146
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ Y+ + +A +VFDE MP +++
Sbjct: 147 CSVFDMYSKLGFLNDAYKVFDE-------------------------------MPHRNLE 175
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W IS + + +R G+ P+ TF + AC+ G +HG
Sbjct: 176 TWNAYISNSVLHGRPEDSVIAFIELLRVGGK--PDSITFCXFLNACSDKLGLGPGCQLHG 233
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
+I+ G+ + S+ LI+FY C + + V+DR+ + +SLI + E
Sbjct: 234 FIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEK 293
Query: 303 AELIFNRL---------------------------------------TEANSISYNSMIK 323
A +F R E N ++++
Sbjct: 294 ASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVD 353
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
Y G +D++++ F MP ERN V+WN+++ GY KA+
Sbjct: 354 MYGKCGSIDNAEQAFNAMP-----------------ERNLVSWNALLGGYAHQGHANKAV 396
Query: 384 QLYMTMRKLA-IDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVD 441
L M A I + + ACS G L+ G ++ + + E LVD
Sbjct: 397 ALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVD 456
Query: 442 MYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+ R G + A + P ++ W AL+ HG L E + E D
Sbjct: 457 LLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELD 510
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 18/279 (6%)
Query: 297 MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+GR A+++ T + YN ++ YA ++ +K + E P RS+
Sbjct: 24 LGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSV---------- 73
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
VTW ++I+G VQN AL + M + TF + A + L
Sbjct: 74 -------VTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTT 126
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ LHA VK ++V+VG S+ DMYS+ G +NDA F + N+ W A ++
Sbjct: 127 GKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVL 186
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
HG ++V+ F +L P++ TF L+AC + G ++ + G +
Sbjct: 187 HGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSV 246
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++D G+ G + E E + D E ++V W +L++A
Sbjct: 247 SNGLIDFYGKCGEV-ECSEMVFDRMGERNSVSWSSLIAA 284
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 138/321 (42%), Gaps = 54/321 (16%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I G+ G++ + +FD+M R VSW++++ Y + + +++ L + ++
Sbjct: 247 SNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDI 306
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ + S++L CA L+ + G+ + L +K+ E FV S L+ Y C I+ A++
Sbjct: 307 EPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQ 366
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV--WTKLISGYAKSVDGC 198
F+ + E N + W+ +L GY + A + +M +V + LI ++ C
Sbjct: 367 AFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLIC----ALSAC 422
Query: 199 EKA------LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+A +K+F M+E P + ++ R G +++C ++F
Sbjct: 423 SRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAG-----------MVECAYDFI 471
Query: 253 E--------SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN-------------SLI 291
+ SI GAL+ GA R++ + E L A L
Sbjct: 472 KRMPFPPTISIWGALL----------GACRMHGKPELGKLAAEKLFELDPKDSGNHVVLS 521
Query: 292 NGLISMGRIEDAELIFNRLTE 312
N + GR E+ ++ N + E
Sbjct: 522 NMFAATGRWEEVTVVRNEMKE 542
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 198/668 (29%), Positives = 332/668 (49%), Gaps = 63/668 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ A +F +M + +SW M+ GY K D++L + + M NV ++ T ++ L
Sbjct: 347 GRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASAL 406
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ CA L L G ++H L G+ + V + LL YA I++A
Sbjct: 407 AACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKA------------- 453
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA---KSVDGCEKALKLFRWM 208
+VF M +KDVV W+ +I+G+ +S D AL FR+M
Sbjct: 454 ------------------IEVFKFMAEKDVVSWSSMIAGFCFNHRSFD----ALYYFRYM 491
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
G PN TF + + ACA GA GK +H +++CG + + AL++ Y C
Sbjct: 492 L--GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQ 549
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL--TEANSISYNSMIKGYA 326
A + + + N +++G ++ G + A +FN++ T + S + A
Sbjct: 550 TSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACA 609
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWNS 368
G++D +L E ++ I + + + EM E++ V+W+S
Sbjct: 610 CLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSS 669
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
MI+G+ N+ AL + M + TF AC+ G+L+ G+ +HA++++
Sbjct: 670 MIAGFCFNHRSFDALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCG 728
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
S YV +L+D+Y +CG + A A FS S +V +W +++G+ HGLG A+ LF
Sbjct: 729 IGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFN 788
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF-RSMKSYGVVPTLEHYTCVVDLLGRS 547
M+E P+ TFV ++ AC RAG+V +G ++F R + + +VP L+HY C+VDLL R
Sbjct: 789 QMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRV 847
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L EA I MPI+ DA VWGALL+ C ++E+GE AA+ + L+ ++ +V+L
Sbjct: 848 GKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLC 907
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
++Y GKW + +RK + +++D GCSW+E+ HAF +D ++P I L
Sbjct: 908 DLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLH 967
Query: 668 HLTANLNS 675
+ + +
Sbjct: 968 GIYERMKA 975
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 144/571 (25%), Positives = 258/571 (45%), Gaps = 59/571 (10%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G++ A +F +MP R V SWN M+ GY K +E+L L M + ++ + TF
Sbjct: 143 RFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPC 202
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C + G+++H VL+ G+ V + L+ YA C +I A++VFD + +
Sbjct: 203 VLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTD 262
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ M+ G+ + + CE L+LF M
Sbjct: 263 CISWNAMIAGHFENH--------------------------------ECEAGLELFLTML 290
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E+ E PN T SV A L K +HG +K GF D + +LI+ Y
Sbjct: 291 EN-EVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRM 349
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGY 325
A +++ R+E + ++I+G G + A ++ + + ++ S +
Sbjct: 350 GDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAAC 409
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------------------ERNPVTWN 367
A G++D +L E ++ I + + + EM E++ V+W+
Sbjct: 410 ACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWS 469
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
SMI+G+ N+ AL + M + TF AC+ G+L+ G+ +HA++++
Sbjct: 470 SMIAGFCFNHRSFDALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRC 528
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
S YV +L+D+Y +CG + A A FS S +V +W +++G+ HGLG A+ LF
Sbjct: 529 GIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLF 588
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
M+ + L+AC G ++ G+K+ ++ G + + ++++ +S
Sbjct: 589 NQMMYTSL--GRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKS 646
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
H+ +A E K M E D V W ++++ F
Sbjct: 647 KHIDKAIEVFKFMA-EKDVVSWSSMIAGFCF 676
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 206/452 (45%), Gaps = 38/452 (8%)
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
L + ML V+ + A+ VF KMP++DV W ++ GY K V E+AL L+ M +
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGK-VGFLEEALDLYYRMLWA 191
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+ YTF V+R C + + G+ VH +++ GF + + AL+ Y C
Sbjct: 192 GMR-PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAV 327
A +V+D + + N++I G E +F + E N ++ S+ +
Sbjct: 251 ARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310
Query: 328 YGQVDDSKRLFEKMPHR----------SIISLNTMIS-------VIPEME-RNPVTWNSM 369
+V +K + R S+I + T + + ME ++ ++W +M
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
ISGY +N +KAL++Y M ++ T + AC+CLG L G LH F
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
V V +L++MY++ I+ A F ++ +V +W++++ G+ + +A+ F
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRY 490
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR-----SMKSYGVVPTLEHYTCVVDLL 544
ML + PN+ TF+ LSAC G + G +I + S G VP ++DL
Sbjct: 491 MLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP-----NALLDLY 544
Query: 545 GRSGHLHEA-EEFIKDMPIELDAVVWGALLSA 575
+ G A +F + E D V W +LS
Sbjct: 545 VKCGQTSYAWAQF--SVHSEKDVVSWNIMLSG 574
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 136/582 (23%), Positives = 217/582 (37%), Gaps = 153/582 (26%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+V N + ++ + A +F M + VVSW++M+ G+ + ++L M
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM-L 492
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+VK N TF LS CA +L GK+IH VL+ G +V + LL Y C +
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDA---------------------------- 169
A F E + + W++ML G+V L A
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACACLG 612
Query: 170 -FDVFIKMPK--------KDVVVWTKLISGYAKSVDGCEKALKLFRWMRES--------- 211
DV IK+ + + VVV L+ YAKS +KA+++F++M E
Sbjct: 613 RLDVGIKLHELAQNKGFIRYVVVANALLEMYAKS-KHIDKAIEVFKFMAEKDVVSWSSMI 671
Query: 212 --------------------GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
G PN TF + + ACA GA GK +H +++CG
Sbjct: 672 AGFCFNHRSFDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGS 731
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
+ + AL++ Y C G+ A F+ +
Sbjct: 732 EGYVPNALLDLYVKC-------------------------------GQTSYAWAQFSVHS 760
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
E + +S+N M+ G+ +G D + LF +M EM +P
Sbjct: 761 EKDVVSWNIMLSGFVAHGLGDIALSLFNQM---------------VEMGEHP-------- 797
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFE 430
TF VL ACS G + QG +L H K
Sbjct: 798 -------------------------DEVTF-VLMCACSRAGMVIQGWELFHRRTEKFSIV 831
Query: 431 SNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
N+ +VD+ SR G + +A + + P+ A W AL+NG H L ++
Sbjct: 832 PNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKV 891
Query: 490 MLEQDIVPN-AATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
+LE + PN A V + AG + ++ ++M+ G+
Sbjct: 892 ILELE--PNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGL 931
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 137/330 (41%), Gaps = 64/330 (19%)
Query: 257 GALIEFYCGCE---AFDGAMRVYDRL--ENPC--LNASNSLINGLISMGRIEDAELIFNR 309
GA + + CE A D MR R E+P L N++++ L+ G I A +F +
Sbjct: 97 GAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAK 156
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
+ E + S+N M+ GY G ++++ L+ +M
Sbjct: 157 MPERDVFSWNVMVGGYGKVGFLEEALDLYYRM---------------------------- 188
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
L+ MR TF + C + + G+ +HAH+++ F
Sbjct: 189 ---------------LWAGMRP-----DVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGF 228
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
V V +LV MY++CG I A+ F ++ + +W A++ G+ + + LF
Sbjct: 229 GDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLT 288
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY----GVVPTLEHYTCVVDLLG 545
MLE ++ PN T + S V +G+++E + + M + G + ++ +
Sbjct: 289 MLENEVQPNLMT---ITSVTVASGMLSE-VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYT 344
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + +A + M + DA+ W A++S
Sbjct: 345 SLGRMGDAGKIFSRMETK-DAMSWTAMISG 373
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 188/669 (28%), Positives = 332/669 (49%), Gaps = 74/669 (11%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
M RT+ WNT+L S+ +++ + S M R K + T L C +L + G
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 104 KQIHCLVLKS---GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY 160
+ IH + K+ G + + VGS L++ Y
Sbjct: 61 EMIHGFLKKNVTLGSDLY--VGSSLIYMY------------------------------- 87
Query: 161 VQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYT 220
V+C M++A +F ++ K D+V W+ ++SG+ K+ +A++ FR M + + P+ T
Sbjct: 88 VKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKN-GSPYQAVEFFRRMATASDVTPDRVT 146
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
+++ AC +L G+ VHG +++ GF D S+ +L+ Y AF A+ ++ +
Sbjct: 147 LITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMA 206
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKR 336
+ + +++I + G +A +FN + TE N + +++ A ++ ++
Sbjct: 207 EKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGRK 266
Query: 337 LFEKMPHRSI---ISLNTMI-----------------SVIPEMERNPVTWNSMISGYVQN 376
E + + + ++T + S IP+ ++ V+W ++ISG+ N
Sbjct: 267 THELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPK--KDVVSWVALISGFTLN 324
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFH---ACSCLGSLQQGQLLHAHLVKTPFESNV 433
+ ++++ + M L + TR ++ +CS LG L+Q + H++++K F+SN
Sbjct: 325 GMAHRSIEEFSIM--LLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNP 382
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
++G SLV++YSRCGS+ +A F+ I+ + WT+L+ GY HG G++A+ F M+
Sbjct: 383 FIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRS 442
Query: 494 -DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
++ PN TF+ +LSAC AGL++EG++IF M Y + P LEHY +VDLLGR G L
Sbjct: 443 SEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELD 502
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
A E K MP + G LL AC N E+ E A+++F L+ Y+++SN+Y
Sbjct: 503 TAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKQLFELESNHAGYYMLMSNMYG 562
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE---- 667
V G+W +R + +KK S IE+ +VH F +D +P +Y L+
Sbjct: 563 VKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHKFVADDDLHPEKEPVYGLLKELDL 622
Query: 668 HLTANLNSV 676
H+ NL +
Sbjct: 623 HMKENLEGI 631
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 138/311 (44%), Gaps = 39/311 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A NLF M + V+SW+T++ Y + E+L + + M + N T +L CA
Sbjct: 198 AVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAA 257
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
N L G++ H L ++ G E V + L+ Y CF EEA
Sbjct: 258 ANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA------------------ 299
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENM 215
+ VF ++PKKDVV W LISG+ +++G ++++ F M
Sbjct: 300 -------------YAVFSRIPKKDVVSWVALISGF--TLNGMAHRSIEEFSIMLLENNTR 344
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ V+ +C+ LG + + H +IK GF+ + IG +L+E Y C + A +V
Sbjct: 345 PDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 404
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-----NSISYNSMIKGYAVYGQ 330
++ + SLI G G+ A FN + + N +++ S++ + G
Sbjct: 405 FNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGL 464
Query: 331 VDDSKRLFEKM 341
+ + R+FE M
Sbjct: 465 IHEGLRIFELM 475
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 46/320 (14%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNETTFSTILSVCA 95
A +F ++P + VVSW ++ G++ S+ S M +N + + +L C+
Sbjct: 299 AYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCS 358
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+L L + H V+K G++ F+G+ L+ Y+ C + A +VF+E+ + ++W+
Sbjct: 359 ELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTS 418
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
LI+GY G KAL+ F M S E
Sbjct: 419 -------------------------------LITGYGIHGKGT-KALETFNHMVRSSEVK 446
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG--GALIEFYCGCEAFDGAM 273
PNE TF S++ AC+ G EG + L++ + ++ L++ D A+
Sbjct: 447 PNEVTFLSILSACSHAGLIHEGLRIFELMVN-DYRLAPNLEHYAVLVDLLGRVGELDTAI 505
Query: 274 RVYDRLENPCLNASNSLINGLISMGRI----EDAELIFNRL--TEANSISYNSMIKG-YA 326
+ R+ + + ++ L+ RI E AE + +L E+N Y ++ Y
Sbjct: 506 EITKRMP---FSPTPQILGTLLGACRIHQNGEMAETVAKQLFELESNHAGYYMLMSNMYG 562
Query: 327 VYGQVDDSKRLFEKMPHRSI 346
V G+ ++ ++L + R I
Sbjct: 563 VKGEWENVEKLRNSVKQRGI 582
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-VKLNETTFS 88
R G L A +F+++ ++ V W +++ GY K ++L + M RS+ VK NE TF
Sbjct: 394 RCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFL 453
Query: 89 TILSVCAQLNSLIDGKQIHCLVL 111
+ILS C+ + +G +I L++
Sbjct: 454 SILSACSHAGLIHEGLRIFELMV 476
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 187/685 (27%), Positives = 331/685 (48%), Gaps = 98/685 (14%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
+L AR LFD+MP R ++S+N+++ GY++ +++++ L +N+KL++ T++ L
Sbjct: 97 ELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
C + L G+ +H LV+ +G F+ + L+ Y+ C ++++A +FD
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFD--------- 207
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
+C+ ++D V W LISGY + V E+ L L M G
Sbjct: 208 ---------RCD-------------ERDQVSWNSLISGYVR-VGAAEEPLNLLAKMHRDG 244
Query: 213 ENMPNEYTFDSVIRACA---RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
N+ Y SV++AC G +G +H K G EFD + AL++ Y +
Sbjct: 245 LNLTT-YALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSL 303
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDA------------------------EL 305
A++++ + + + N++I+G + M I D +
Sbjct: 304 KEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSV 363
Query: 306 IFNRLTEANSISY--------------------NSMIKGYAVYGQVDDSKRLFEKMPHRS 345
+ + A ++ Y +++I+ YA+ G +D + F +
Sbjct: 364 VLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQD 423
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
I S W SMI +VQN E A L+ + I T S++
Sbjct: 424 IAS-----------------WTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM 466
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
AC+ +L G+ + + +K+ ++ V TS + MY++ G++ A F + +P+VA
Sbjct: 467 SACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVA 526
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
++A+++ + HG +EA+ +FE M I PN F+GVL AC GLV +G+K F+ M
Sbjct: 527 TYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCM 586
Query: 526 KS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
K+ Y + P +H+TC+VDLLGR+G L +AE I + V W ALLS+C + + +
Sbjct: 587 KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVI 646
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
G+R A+++ L+ + +YV+L NIY G ++R+ + VKK+P SWI + +
Sbjct: 647 GKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGN 706
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHL 669
+ H+F+V D ++P+ +IY LE +
Sbjct: 707 QTHSFAVADLSHPSSQMIYTMLETM 731
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 225/450 (50%), Gaps = 41/450 (9%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y +C + A +F +MP+++++ + LISGY + + E+A++LF RE+ + +++
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQ-MGFYEQAMELFLEAREANLKL-DKF 149
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T+ + C G+++HGL++ G + LI+ Y C D AM ++DR
Sbjct: 150 TYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRL---------------TEANSISYNS--MI 322
+ + NSLI+G + +G E+ + ++ +A I+ N +
Sbjct: 210 DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSII-------SLNTMISVIPEM-ERNPVTWNSMISGYV 374
KG A++ F+ + +++ SL I + M +N VT+N+MISG++
Sbjct: 270 KGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Query: 375 Q-----NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
Q + +A +L+M M++ ++ + STFSV+ ACS +L+ G+ +HA + K F
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+S+ ++G++L+++Y+ GS D F+S S ++A+WT++++ + + A LF
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLG 545
+ I P T ++SAC ++ G +I + Y + ++ +T V + +
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQI----QGYAIKSGIDAFTSVKTSSISMYA 505
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+SG++ A + ++ D + A++S+
Sbjct: 506 KSGNMPLANQVFIEVQ-NPDVATYSAMISS 534
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 218/498 (43%), Gaps = 77/498 (15%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
++Q+ ++ N I + G+L A +LFD+ R VSWN+++ GY + +E L+L
Sbjct: 179 LSQQVFLI--NVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNL 236
Query: 72 VSTMHRSNVKLNETTFSTILSVCA-QLNS--LIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
++ MHR + L ++L C LN + G IHC K G E V + LL
Sbjct: 237 LAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDM 296
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
YA ++EA ++F + N + ++ M+ G++Q + ++D
Sbjct: 297 YAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD-------------------- 336
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
+ +A KLF M+ G P+ TF V++AC+ G+ +H L+ K
Sbjct: 337 -------EASSEAFKLFMDMQRRGLE-PSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 388
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
F+ DE IG ALIE Y + + M+ + + + S+I+ + ++E A +F
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFR 448
Query: 309 RLTEAN-------------------SISYNSMIKGYAVYGQVD-------DSKRLFEK-- 340
+L ++ ++S I+GYA+ +D S ++ K
Sbjct: 449 QLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 341 -MPHRSIISLNTMISVIPEMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
MP ++ I V +NP T+++MIS Q+ +AL ++ +M+ I
Sbjct: 509 NMP----LANQVFIEV-----QNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPN 559
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG--TSLVDMYSRCGSINDAQ-A 454
+ F + AC C G L L + +K + N T LVD+ R G ++DA+
Sbjct: 560 QQAFLGVLIAC-CHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENL 618
Query: 455 SFSSISSPNVAAWTALMN 472
SS + W AL++
Sbjct: 619 ILSSGFQDHPVTWRALLS 636
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 156/359 (43%), Gaps = 71/359 (19%)
Query: 216 PNEYTFDS-----VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
P DS + + A+ G+ GK+ HG +IK + L+ YC C
Sbjct: 40 PKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELG 99
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIE----------DAELIFNRLTEANSISY-- 318
A +++DR+ + + NSLI+G MG E +A L ++ T A ++ +
Sbjct: 100 FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 319 ---------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
N +I Y+ G++D + LF++
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD--------- 210
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
ER+ V+WNS+ISGYV+ E+ L L M + ++ T + AC C+
Sbjct: 211 --------ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC-CI 261
Query: 412 ----GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
G +++G +H + K E ++ V T+L+DMY++ GS+ +A FS + S NV +
Sbjct: 262 NLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTY 321
Query: 468 TALMNGYSHHG-----LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
A+++G+ SEA LF M + + P+ +TF VL AC A + G +I
Sbjct: 322 NAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ +LF + GS+ G+L H H++K+ +Y+ +L++MY +C + A+ F +
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
N+ ++ +L++GY+ G +A+ LF E ++ + T+ G L C ++ G
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + G+ + ++D+ + G L +A D E D V W +L+S
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLF-DRCDERDQVSWNSLISG 223
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 202/736 (27%), Positives = 349/736 (47%), Gaps = 143/736 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLC-----GYSKWAKFDESLSLV 72
I S N ++ ++ L A LF QMP R VS NT++ GY + A L +V
Sbjct: 71 IFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMV 130
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
+VK + TF+T+ S C L + G++ H LVLK G++ +V + LL C
Sbjct: 131 ----YESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALL-----C 181
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
Y +C L DAF VF + + + V +T ++ G +
Sbjct: 182 M--------------------------YTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLS 215
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAF------------CEGKVV 240
++ + ++ L+LFR M G + + + +++ CA+ +F +GK +
Sbjct: 216 QT-NQVKEGLELFRLMLRKGICV-DSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQI 273
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL------ 294
H L +K GFE D + +L++ Y D A V++ L+ + + N +I+G
Sbjct: 274 HTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDS 333
Query: 295 -----------------------------ISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
+ G ++ IF+ ++ + IS+N+++ GY
Sbjct: 334 EKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAILSGY 393
Query: 326 AVYGQVDDSKRLFEKM------PHRSIISL------------------------------ 349
++ LF KM P R+ +++
Sbjct: 394 NQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDV 453
Query: 350 ---NTMISVIPEM--------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+++I+V + E + V WNSMI+G+ N+L + AL + MR+
Sbjct: 454 YVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQF 513
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ +F+ + +C+ L SL QGQ +HA ++K + NV+VG+SLV+MY +CG + A
Sbjct: 514 GFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAA 573
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ F + N+ W +++GY+H+G G EAV L++ M+ P+ TFV VL+AC +
Sbjct: 574 RYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHS 633
Query: 513 GLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
LV+EG++IF SM + + VVP L+HYTC++D LGR G +E E + MP + D +VW
Sbjct: 634 ALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEV 693
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
+LS+C N+ + +RAA+++ L+ + + YV+L+N+Y+ +G+W +R ++ ++
Sbjct: 694 VLSSCRVHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQI 753
Query: 632 KKDPGCSWIELNSRVH 647
KDPG S E V
Sbjct: 754 HKDPGYSRSEFKYDVQ 769
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 132/585 (22%), Positives = 253/585 (43%), Gaps = 104/585 (17%)
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C SL K IH + + F+ + L+ Y+ C +I A VFD++ N
Sbjct: 11 LLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKN 70
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWM 208
++ +L + + N + A +F++MP+++ V +I+ K +G E+ AL + M
Sbjct: 71 IFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVK--NGYERQALDTYDLM 128
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
P+ TF +V AC L G+ HGL++K GF+ + + AL+ Y C
Sbjct: 129 MVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGL 188
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE---------------- 312
+ A RV++ + P +++ GL ++++ +F +
Sbjct: 189 NEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVI 248
Query: 313 -ANSISY----------------------------------NSMIKGYAVYGQVDDSKRL 337
A +S+ NS++ YA G +D ++ +
Sbjct: 249 CAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENV 308
Query: 338 FEKMPHRSIISLNTMIS-------------VIPEM-----ERNPVT-------------- 365
FE + S++S N MIS M E + VT
Sbjct: 309 FENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDV 368
Query: 366 -----------------WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
WN+++SGY Q+ H +A++L+ M+ + R+T +++ +C
Sbjct: 369 KVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSC 428
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ LG L+ G+ +HA K F +VYV +SL+++YS+CG + ++ FS +S +V W
Sbjct: 429 AELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWN 488
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
+++ G+S + L +A+ F+ M + P+ +F + S+C + + +G +I +
Sbjct: 489 SMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKD 548
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
G V + + +V++ + G + A + MP + + V W ++
Sbjct: 549 GYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGK-NIVTWNEMI 592
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 152/328 (46%), Gaps = 33/328 (10%)
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDS 334
+E LN N L+ I+ + A++I R+ +++ N +I Y+ Q+ +
Sbjct: 1 MEVKSLNLIN-LLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSA 59
Query: 335 KRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNSMISGYVQNNLHE 380
+F+K+PH++I S N ++S + ERN V+ N++I+ V+N
Sbjct: 60 HHVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYER 119
Query: 381 KALQLY-MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
+AL Y + M ++ + TF+ +F AC L + G+ H ++K F+SN+YV +L
Sbjct: 120 QALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNAL 179
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+ MY++CG DA F I PN +T +M G S E + LF +ML + I ++
Sbjct: 180 LCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDS 239
Query: 500 ATFVGVLSACVRA----------GLVN--EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
+ +L C + GL +G +I +G L ++D+ ++
Sbjct: 240 VSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKT 299
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + AE +++ + V W ++S
Sbjct: 300 GDMDSAENVFENLD-KHSVVSWNIMISG 326
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/501 (21%), Positives = 218/501 (43%), Gaps = 86/501 (17%)
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
+++++C + K++H + + D + LI+ Y C A V+D++ +
Sbjct: 10 NLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHK 69
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNS----MIK-GYA----------- 326
+ + N++++ ++ A +F ++ E N++S N+ M+K GY
Sbjct: 70 NIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMM 129
Query: 327 VYGQVDDSKRLFE---------------KMPHRSIISL---------NTMISVIPE---- 358
VY V S F + H ++ + N ++ + +
Sbjct: 130 VYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLN 189
Query: 359 ----------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
+E N VT+ +M+ G Q N ++ L+L+ M + I + S + C
Sbjct: 190 EDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVIC 249
Query: 409 S-------C-----LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ C L + QG+ +H VK FE ++++ SL+DMY++ G ++ A+ F
Sbjct: 250 AKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVF 309
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
++ +V +W +++GY + +A+ F+ M P+ T++ +L+ACV++G V
Sbjct: 310 ENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVK 369
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE---LDAVVWGALL 573
G +IF M S P+L + ++ +S EA E + M + D +L
Sbjct: 370 VGRQIFDCMSS----PSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIIL 425
Query: 574 SACWFWMNMEVGER---AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630
S+C +E G++ +QK+ D +++ +I N+Y+ GK + +L+ L+
Sbjct: 426 SSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLI--NVYSKCGKMEVSKHVFSKLSELD 483
Query: 631 VKKDPGCSWIELNSRVHAFSV 651
V W NS + FS+
Sbjct: 484 V-----VCW---NSMIAGFSI 496
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 195/636 (30%), Positives = 323/636 (50%), Gaps = 62/636 (9%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
++ A+ +F+ + R +V WN ML G+++ E + S M R + +E TF++I S
Sbjct: 359 KMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFS 418
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
CA L+ L G Q+H +++K+ + FV + L+ YA ++EA++ F+
Sbjct: 419 ACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFE--------- 469
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
M D V W +I GY + + ++A +FR M +G
Sbjct: 470 ----------------------LMKIHDNVSWNAIIVGYVQE-EYNDEAFFMFRRMVSNG 506
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+P+E + S++ ACA + G+ H LL+K G + G +LI+ Y C A
Sbjct: 507 V-LPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAA 565
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKG---- 324
V+ + + + + N+LI G +MG +E+A +F + + +++ ++ G
Sbjct: 566 RDVFYSMPSRNVVSVNALIAGY-TMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGA 624
Query: 325 ------YAVYGQVDDSKRLFEK-----------MPHRSIISLNTMISVIPEMERNPVTWN 367
++GQV L M + + T+ S + + + V W
Sbjct: 625 FMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSEL-QYPKGLVVWT 683
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
++ISGY Q N HEKALQ Y MR I ++ F+ + AC+ + SLQ GQ +H+ + T
Sbjct: 684 ALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHT 743
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN-VAAWTALMNGYSHHGLGSEAVLL 486
F + +SL+DMY++CG + + F + N V +W +++ G + +G EA+ +
Sbjct: 744 GFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEI 803
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLG 545
F+ M +Q I+P+ TF+GVLSAC AG V+EG K+F M +Y + P ++H C+VD+LG
Sbjct: 804 FKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILG 863
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R G L+EAEEFI + + D ++W LL AC + G+RAA K+ L + S+YV+
Sbjct: 864 RWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSYVL 923
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
LS+IYA W + +R+ + VKK PG SWIE
Sbjct: 924 LSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIE 959
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 155/620 (25%), Positives = 270/620 (43%), Gaps = 97/620 (15%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A+ F ++ + V +WN++L Y F + M V+ NE TF+ +L
Sbjct: 90 GNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVL 149
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S C+ L + G+Q+HC V K+G+ F GL+ YA C + +A+ VFD + +
Sbjct: 150 SACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTV 209
Query: 152 LWSLMLVGYVQCNL-----------------------------------MSDAFDVFIKM 176
W+ ++ GYV+ ++DA +F ++
Sbjct: 210 SWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQI 269
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
P +VV W +ISG+AK E+A+ F ++++G + SV+ A A L
Sbjct: 270 PNPNVVAWNVMISGHAKR-GFAEEAISFFLELKKTGLK-ATRSSLGSVLSAIASLSMLNY 327
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
G +VH K G + + +G AL+ Y C D A +V++ L + N+++ G
Sbjct: 328 GSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ 387
Query: 297 MGRIEDA---------------ELIFNRLTEA------------------------NSIS 317
G ++ E F + A N
Sbjct: 388 NGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFV 447
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
N+++ YA G + ++++ FE M ++ N V+WN++I GYVQ
Sbjct: 448 ANALVDMYAKSGALKEARKQFELM----------------KIHDN-VSWNAIIVGYVQEE 490
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+++A ++ M + + + + AC+ + L++GQ H LVK +++ G+
Sbjct: 491 YNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGS 550
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
SL+DMY +CG + A+ F S+ S NV + AL+ GY+ L EA+ LF+ + + P
Sbjct: 551 SLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHL-EEAIHLFQEIQMVGLKP 609
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV--VDLLGRSGHLHEAEE 555
TF G+L C A ++N G +I + +G + + E CV + L S ++E
Sbjct: 610 TEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSE-MVCVSLLCLYMNSQRFVDSET 668
Query: 556 FIKDMPIELDAVVWGALLSA 575
++ VVW AL+S
Sbjct: 669 LFSELQYPKGLVVWTALISG 688
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 206/433 (47%), Gaps = 36/433 (8%)
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
LL ++++ YV+C + A F ++ KKDV W ++S Y LF + +
Sbjct: 77 LLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDH--------GLFATVVQ 128
Query: 211 S------GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
S E PNE+TF V+ AC+ L G+ VH + K GF F G LI+ Y
Sbjct: 129 SFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYA 188
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNS 320
C A V+D N + +LI G + G +A +F+R+ + I+ +
Sbjct: 189 KCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVT 248
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
++ Y G++ D+++LF ++P+ N V WN MISG+ + E
Sbjct: 249 VVNAYVALGRLADARKLFTQIPNP-----------------NVVAWNVMISGHAKRGFAE 291
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+A+ ++ ++K + TRS+ + A + L L G ++HA K + NVYVG++LV
Sbjct: 292 EAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALV 351
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
+MY++C ++ A+ F+S+ N+ W A++ G++ +GL E + F M P+
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEF 411
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
TF + SAC +N G ++ M L +VD+ +SG L EA + + M
Sbjct: 412 TFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELM 471
Query: 561 PIELDAVVWGALL 573
I D V W A++
Sbjct: 472 KIH-DNVSWNAII 483
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 145/603 (24%), Positives = 270/603 (44%), Gaps = 100/603 (16%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
Q TL+ N + G+L AR LF Q+P VV+WN M+ G++K +E++S
Sbjct: 243 QITLVTVVNAYVAL----GRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFL 298
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+ ++ +K ++ ++LS A L+ L G +H K G + +VGS L+ YA C
Sbjct: 299 ELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCS 358
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+++ AK+VF+ L E N +LW+ ML G+ Q +G A+
Sbjct: 359 KMDAAKQVFNSLGERNIVLWNAMLGGFAQ--------------------------NGLAQ 392
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
V ++ F M+ G P+E+TF S+ ACA L G +H ++IK F +
Sbjct: 393 EV------MEFFSCMKRHGPQ-PDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNL 445
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-- 311
+ AL++ Y A A + ++ ++ + N++I G + ++A +F R+
Sbjct: 446 FVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSN 505
Query: 312 -------------------------------------EANSISYNSMIKGYAVYGQVDDS 334
+ ++ + +S+I Y G V +
Sbjct: 506 GVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAA 565
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+ +F MP R+++S+ N++I+GY +L E+A+ L+ ++ + +
Sbjct: 566 RDVFYSMPSRNVVSV-----------------NALIAGYTMGHL-EEAIHLFQEIQMVGL 607
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGSINDAQ 453
T TF+ L C L G+ +H ++K F S+ V SL+ +Y D++
Sbjct: 608 KPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSE 667
Query: 454 ASFSSISSPN-VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
FS + P + WTAL++GY+ +A+ ++ M +I+P+ A F VL AC
Sbjct: 668 TLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGM 727
Query: 513 GLVNEGMKIFRSMKSYGVVPTLEHYTC--VVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
+ G +I + G ++ TC ++D+ + G + + + ++MP + + W
Sbjct: 728 SSLQNGQEIHSLIFHTGF--NMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWN 785
Query: 571 ALL 573
+++
Sbjct: 786 SMI 788
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/521 (24%), Positives = 219/521 (42%), Gaps = 96/521 (18%)
Query: 4 YATQSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
+ Q T+M + + N + ++G L AR F+ M I VSWN ++ GY
Sbjct: 428 FGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYV 487
Query: 61 KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
+ DE+ + M + V +E + ++I+S CA + L G+Q HCL++K G +
Sbjct: 488 QEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTC 547
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
GS L+ Y V+C ++ A DVF MP ++
Sbjct: 548 AGSSLIDMY-------------------------------VKCGVVLAARDVFYSMPSRN 576
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
VV LI+GY ++ E+A+ LF+ ++ G P E TF ++ C G+ +
Sbjct: 577 VVSVNALIAGY--TMGHLEEAIHLFQEIQMVGLK-PTEVTFAGLLDGCDGAFMLNLGRQI 633
Query: 241 HGLLIKCGF-------------------EFDES--------------IGGALIEFYCGCE 267
HG ++K GF F +S + ALI Y
Sbjct: 634 HGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQN 693
Query: 268 AFDGAMRVYDRLEN----PCLNASNSLINGLISMGRIEDAE----LIFNRLTEANSISYN 319
+ A++ Y + + P A S++ M +++ + LIF+ + ++ +
Sbjct: 694 HHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCS 753
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
S+I YA G V S ++F +MP R+ N ++WNSMI G +N
Sbjct: 754 SLIDMYAKCGDVKGSLQVFREMPRRN----------------NVISWNSMIVGLAKNGYA 797
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTS 438
E+AL+++ M + +I TF + ACS G + +G+ + +V + V
Sbjct: 798 EEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGC 857
Query: 439 LVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
+VD+ R G +N+A+ + + + W+ L+ HG
Sbjct: 858 MVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHG 898
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 31/233 (13%)
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L +L +++H+ +K +G +VD+Y +CG+++ AQ +FS + +V AW ++
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI--------- 521
++ Y HGL + V F M ++ PN TF VLSAC VN G ++
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 522 -FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC---W 577
FRS G ++D+ + +L +A + D + LD V W AL++
Sbjct: 174 GFRSFCQGG----------LIDMYAKCRYLRDA-RLVFDGALNLDTVSWTALIAGYVRDG 222
Query: 578 FWMN-MEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
F M ++V +R + D+ + V + N Y LG+ D RK T +
Sbjct: 223 FPMEAVKVFDRMQRVGHAPDQITL---VTVVNAYVALGRLA---DARKLFTQI 269
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/597 (30%), Positives = 295/597 (49%), Gaps = 83/597 (13%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
+ ++++ I + N + G+Q H ++ G + F+ + ++ YA+ +++ A VF
Sbjct: 76 HPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVF 135
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
D + + LL++ ++ Y + + YA+
Sbjct: 136 DRIDNPSSLLYNSIIRAYTR---------------HGXXXXXXXXLEAYAR--------- 171
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
++ G+N +T V+++CA L C G+ VHG ++ G E D +G +LI+
Sbjct: 172 --MHFLGLLGDN----FTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 225
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI 322
Y C G I DA +F+++ + S+N++I
Sbjct: 226 YVKC-------------------------------GVIGDARKLFDKMIVRDMASWNALI 254
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
GY G++ ++ LFE+M HR+I+S W +MISGY QN E+A
Sbjct: 255 AGYMKEGEIGVAEDLFERMEHRNIVS-----------------WTAMISGYTQNGFAEQA 297
Query: 383 LQLYMTMRKLAIDRTRS--TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
L L+ M + + + T + AC+ +L++G+ +H N V T+L
Sbjct: 298 LGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALA 357
Query: 441 DMYSRCGSINDAQASFSSISS--PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
MY++C S+ +A+ F I+ N+ AW ++ Y+ HG G EAV +FE ML + P+
Sbjct: 358 GMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPD 417
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
A TF+G+LS C +GL++ G+ F M + + V P +EHY CVVDLLGR+G L EA+E I
Sbjct: 418 AVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELI 477
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
MP++ VWGALL+AC N+E+ E AA+++F L+ YV+LSN+YA G W
Sbjct: 478 SQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWE 537
Query: 618 KKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+ +R L + +KK PGCSWIE+N + H F D+++P IY LE L +
Sbjct: 538 EVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIK 594
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 210/476 (44%), Gaps = 35/476 (7%)
Query: 23 KAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES---LSLVSTMHRSN 79
K + +G L +A +FD++ + + +N+++ Y++ L + MH
Sbjct: 117 KMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLG 176
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ + T +L CA L+ + G+ +H L+ G E +VG+ L+ Y C I +A+
Sbjct: 177 LLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDAR 236
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
++FD++ + W+ ++ GY++ + A D+F +M +++V WT +ISGY ++ E
Sbjct: 237 KLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQN-GFAE 295
Query: 200 KALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+AL LF M + G M PN T SV+ ACA+ A G+ +H G + S+ A
Sbjct: 296 QALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTA 355
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLN--ASNSLINGLISMGRIEDAELIFNRLTEA--- 313
L Y C + A +D + N A N++I S G +A IF + A
Sbjct: 356 LAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQ 415
Query: 314 -NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
+++++ ++ G + G +D F M T+ SV P +E + + G
Sbjct: 416 PDAVTFMGLLSGCSHSGLIDAGLNHFNDM--------GTIHSVEPRVEHYACVVDLL--G 465
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL-VKTPFES 431
+ K L M M+ S + L AC +L+ +L L V P S
Sbjct: 466 RAGRLVEAKELISQMPMQA-----GPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNS 520
Query: 432 NVYVGTSLVDMYSRCGSINDAQA-----SFSSISSPNVAAWTALMNGYSHHGLGSE 482
YV L ++Y+ G + + + + +W + NG SH +G++
Sbjct: 521 GNYV--LLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEI-NGKSHLFMGAD 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 12/251 (4%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N I + G++ A +LF++M R +VSW M+ GY++ +++L L M +
Sbjct: 247 MASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQ 306
Query: 78 --SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
S +K N T ++L CAQ +L G++IH G V + L YA C+ +
Sbjct: 307 DGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSL 366
Query: 136 EEAKRVFDELHED--NELLWSLMLVGYVQCNLMSDAFDVFIKMPK----KDVVVWTKLIS 189
EA+ FD + ++ N + W+ M+ Y +A +F M + D V + L+S
Sbjct: 367 VEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLS 426
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
G + S + L F M P + V+ R G E K L+ +
Sbjct: 427 GCSHS-GLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAK---ELISQMPM 482
Query: 250 EFDESIGGALI 260
+ S+ GAL+
Sbjct: 483 QAGPSVWGALL 493
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 192/677 (28%), Positives = 323/677 (47%), Gaps = 54/677 (7%)
Query: 10 TLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTV---VSWNTMLCGYSKWAKFD 66
L T L + I R L AR +FD +P+ ++ + WN+++
Sbjct: 55 VLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQ 114
Query: 67 ESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
+L L M + + T ++ C+ L S + +HC L+ G+ V + L+
Sbjct: 115 HALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELV 174
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVV 182
Y +E+A+++FD + + + W+ M+ GY A VF +M + + V
Sbjct: 175 GMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSV 234
Query: 183 VWTKLISGYAKSVDGC---EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
WT L+S +A+ C ++ L+LF+ MR G + E V+ CA + GK
Sbjct: 235 TWTSLLSSHAR----CGLYDETLELFKVMRTRGIEIGAE-ALAVVLSVCADMAEVDWGKE 289
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
+HG ++K G+E L N+LI
Sbjct: 290 IHGYVVKGGYE-------------------------------DYLFVKNALIGTYGKHQH 318
Query: 300 IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
+ DA +F + N +S+N++I YA G D++ F M +S ++++
Sbjct: 319 MGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHME-KSDSDDHSLV------ 371
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
N ++W+++ISG+ EK+L+L+ M+ + T S + C+ L +L G+
Sbjct: 372 RPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRE 431
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
LH + ++ N+ VG L++MY +CG + F +I ++ +W +L+ GY HGL
Sbjct: 432 LHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGL 491
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYT 538
G A+ F M+ + P+ TFV +LSAC AGLV G +F M + + P +EHY
Sbjct: 492 GENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYA 551
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
C+VDLLGR+G L EA + +++MPIE + VWGALL++C + +M++ E A ++ L K
Sbjct: 552 CMVDLLGRAGLLKEATDIVRNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSK 611
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
++++LSNIYA G+W +R +KK PG SWIE+ +V+ FS + +
Sbjct: 612 ITGSFMLLSNIYAANGRWDDSARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVHFG 671
Query: 659 CNVIYATLEHLTANLNS 675
IY LE L ++ S
Sbjct: 672 LEDIYVILEELNLHMAS 688
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 7/179 (3%)
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+F F C +LQQ + LH+ LV T ++ L+ +Y+R ++ A+ F +I
Sbjct: 33 SFHAFFQRCF---TLQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAI 89
Query: 460 ---SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
S ++ W +++ HG A+ L+ M + +P+ T V+ AC G
Sbjct: 90 PLESLHHLLLWNSIIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSY 149
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G L +V + G+ G + +A + M + V W ++S
Sbjct: 150 LCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVR-SIVSWNTMVSG 207
>gi|224080297|ref|XP_002306087.1| predicted protein [Populus trichocarpa]
gi|222849051|gb|EEE86598.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 200/672 (29%), Positives = 343/672 (51%), Gaps = 68/672 (10%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDE-SLSLVSTMH-- 76
S N I+ ++ L A+++FD +R +V++N+ML GY ++ +L L M
Sbjct: 56 SWNTIISAHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSK 115
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R+ +++++ T ++++++ ++L + G+Q+H ++K+G + FV S L+ Y+ C +
Sbjct: 116 RNEIEIDDLTITSMVNLFSKLCNSCYGRQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCFK 175
Query: 137 EAKRVFDELHED---NELLWSLMLVGYVQCNLMSDAFDVFIKMPK-KDVVVWTKLISGYA 192
EA +VF + + + + M+ Y + M A +F + + D V W LISGY
Sbjct: 176 EACQVFKGCEREGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYV 235
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
++ E ALKLF M E+G NE+TF SV+ ACA L GK +H ++K G
Sbjct: 236 QNGYPVE-ALKLFVCMGENGVKW-NEHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSS 293
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+ +++ YC C G M+ + L L G+ S
Sbjct: 294 AFVESGIVDVYCKC----GNMKYAESLH---------LTRGVRS---------------- 324
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
S S SMI GY+ G + ++ RLF+ + E+N + W ++ SG
Sbjct: 325 --SFSITSMIVGYSSQGNMVEACRLFDSLE-----------------EKNSIVWAALFSG 365
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL-----FHACSCLGSLQQGQLLHAHLVKT 427
YV+ K + + + + I + + L F+ C+ +L G+ +H ++ +
Sbjct: 366 YVK----LKQCEAFFELLREYIAKEAAIPDALILINAFNVCAFQAALGPGKQIHGYVFRM 421
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
E ++ T+++DMYS+CGSI A+ F + ++ + ++ GY+HHG +A+ LF
Sbjct: 422 GIEMDMKTTTAMIDMYSKCGSIPYAEKLFLKVIERDLVLYNVMLAGYAHHGHEIKAINLF 481
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
+ MLE+ + P+A TFV +LSAC GLV+ G K F SM + Y ++P +HY C++DL GR
Sbjct: 482 QEMLERGVGPDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMIDLYGR 541
Query: 547 SGHLHEAEEFIKDMPIE-LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
+ L + F++ +P+E DA V GA +AC N E+ + A +K+ ++ + YV
Sbjct: 542 ASQLEKMVLFMQRIPVEHQDAAVVGAFFNACRLNNNTELAKEAEEKLLNIEGDSGARYVQ 601
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
L+N+YA G W + I + + E KK GCSW+ L++ VH+F+ DR + IY+
Sbjct: 602 LANVYAAEGNWAEMGRISREMRGKEAKKFAGCSWVYLDNEVHSFTSGDRTHTKAESIYSK 661
Query: 666 LEHLTANLNSVV 677
LE L A L +
Sbjct: 662 LEFLMAELYEIA 673
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 226/519 (43%), Gaps = 92/519 (17%)
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ SL DG H +KSG+ + L+ Y+ I EA+++FDE+ + N W+ +
Sbjct: 1 MRSLKDGLMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTI 60
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENM 215
+ +++ ++ A +F +D+V + ++SGY SVDG E+ AL+LF M+ +
Sbjct: 61 ISAHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYV-SVDGYERNALELFVEMQSKRNEI 119
Query: 216 P-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
++ T S++ ++L C G+ +H ++K G + + +LI+ Y C F A +
Sbjct: 120 EIDDLTITSMVNLFSKLCNSCYGRQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCFKEACQ 179
Query: 275 VYDRLENPC---LNASNSLINGLISMGRIEDAELIFNRLTEAN-SISYNSMIKGYAVYGQ 330
V+ E L + N+++ G +E A +F R +E N S+S+N++I GY G
Sbjct: 180 VFKGCEREGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQNGY 239
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
++ +LF M N V WN
Sbjct: 240 PVEALKLFVCMG------------------ENGVKWN----------------------- 258
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
TF + AC+ L +L+ G+ +HA ++K S+ +V + +VD+Y +CG++
Sbjct: 259 -------EHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSSAFVESGIVDVYCKCGNMK 311
Query: 451 DAQA-------------------------------SFSSISSPNVAAWTALMNGYSHHGL 479
A++ F S+ N W AL +GY
Sbjct: 312 YAESLHLTRGVRSSFSITSMIVGYSSQGNMVEACRLFDSLEEKNSIVWAALFSGYVKLK- 370
Query: 480 GSEAV--LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY 537
EA LL E + ++ +P+A + + C + G +I + G+ ++
Sbjct: 371 QCEAFFELLREYIAKEAAIPDALILINAFNVCAFQAALGPGKQIHGYVFRMGIEMDMKTT 430
Query: 538 TCVVDLLGRSGHLHEAEE-FIKDMPIELDAVVWGALLSA 575
T ++D+ + G + AE+ F+K IE D V++ +L+
Sbjct: 431 TAMIDMYSKCGSIPYAEKLFLK--VIERDLVLYNVMLAG 467
>gi|356532382|ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Glycine max]
Length = 669
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 186/665 (27%), Positives = 326/665 (49%), Gaps = 103/665 (15%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N IT GR+G+L AR LFD+MP R VS+N+M+ Y K E+ ++ M + NV
Sbjct: 69 NVEITILGRHGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETVFKEMPQRNV- 127
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+++IDG YA +++A++V
Sbjct: 128 -------------VAESAMIDG-------------------------YAKVGRLDDARKV 149
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD + + N W+ ++ GY C + +A +F +MP+++VV WT ++ G+A++ + A
Sbjct: 150 FDNMTQRNAFSWTSLISGYFSCGKIEEALHLFDQMPERNVVSWTMVVLGFARN-GLMDHA 208
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+ F M E ++I A + A+ +
Sbjct: 209 GRFFYLMPEK-----------NIIAWTAMVKAYLDN------------------------ 233
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
GC F A +++ + + + N +I+G + R+++A +F + + N +S+ +M
Sbjct: 234 ---GC--FSEAYKLFLEMPERNVRSWNIMISGCLRANRVDEAIGLFESMPDRNHVSWTAM 288
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV----------------IPEMERNPVT 365
+ G A + +++ F+ MP++ + + MI+ IPE +N +
Sbjct: 289 VSGLAQNKMIGIARKYFDLMPYKDMAAWTAMITACVDEGLMDEARKLFDQIPE--KNVGS 346
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
WN+MI GY +N+ +AL L++ M + +T + + +C + L Q HA ++
Sbjct: 347 WNTMIDGYARNSYVGEALNLFVLMLRSCFRPNETTMTSVVTSCDGMVELMQA---HAMVI 403
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
FE N ++ +L+ +YS+ G + A+ F + S +V +WTA++ YS+HG G A+
Sbjct: 404 HLGFEHNTWLTNALITLYSKSGDLCSARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQ 463
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLL 544
+F ML I P+ TFVG+LSAC GLV++G ++F S+K +Y + P EHY+C+VD+L
Sbjct: 464 VFARMLVSGIKPDEVTFVGLLSACSHVGLVHQGRRLFDSIKGTYNLTPKAEHYSCLVDIL 523
Query: 545 GRSGHLHEAEEFIKDMPIEL-DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
GR+G + EA + + +P D V ALL AC ++ + +K+ L+ Y
Sbjct: 524 GRAGLVDEAMDVVATIPPSARDEAVLVALLGACRLHGDVAIANSIGEKLLELEPSSSGGY 583
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
V+L+N YA G+W + +RKR+ VK+ PG S I++ + H F V +R++P IY
Sbjct: 584 VLLANTYAAEGQWDEFAKVRKRMRERNVKRIPGYSQIQITGKNHVFVVGERSHPQIEEIY 643
Query: 664 ATLEH 668
L+
Sbjct: 644 RLLQQ 648
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 132/566 (23%), Positives = 233/566 (41%), Gaps = 105/566 (18%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N I +N L+ A +F +MP R VV+ + M+ GY+K + D++ + M +
Sbjct: 97 VSYNSMIAVYLKNKDLLEAETVFKEMPQRNVVAESAMIDGYAKVGRLDDARKVFDNMTQR 156
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
N FS SLI G Y +C +IEEA
Sbjct: 157 N------AFS--------WTSLISG-------------------------YFSCGKIEEA 177
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+FD++ E N + W+++++G+ + LM A F MP+K+++ WT ++ Y +GC
Sbjct: 178 LHLFDQMPERNVVSWTMVVLGFARNGLMDHAGRFFYLMPEKNIIAWTAMVKAYLD--NGC 235
Query: 199 -EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+A KLF M E N +++ +I C R E L + + +
Sbjct: 236 FSEAYKLFLEMPER-----NVRSWNIMISGCLRANRVDEAIG----LFESMPDRNHVSWT 286
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
A++ + A + +D + + A ++I + G +++A +F+++ E N S
Sbjct: 287 AMVSGLAQNKMIGIARKYFDLMPYKDMAAWTAMITACVDEGLMDEARKLFDQIPEKNVGS 346
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKM---------------------------PHRSIISL- 349
+N+MI GYA V ++ LF M H +I L
Sbjct: 347 WNTMIDGYARNSYVGEALNLFVLMLRSCFRPNETTMTSVVTSCDGMVELMQAHAMVIHLG 406
Query: 350 --------NTMISVIPE--------------MERNPVTWNSMISGYVQNNLHEKALQLYM 387
N +I++ + ++ V+W +MI Y + ALQ++
Sbjct: 407 FEHNTWLTNALITLYSKSGDLCSARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQVFA 466
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRC 446
M I TF L ACS +G + QG+ L + T + LVD+ R
Sbjct: 467 RMLVSGIKPDEVTFVGLLSACSHVGLVHQGRRLFDSIKGTYNLTPKAEHYSCLVDILGRA 526
Query: 447 GSINDAQASFSSI--SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
G +++A ++I S+ + A AL+ HG + A + E +LE + ++ +V
Sbjct: 527 GLVDEAMDVVATIPPSARDEAVLVALLGACRLHGDVAIANSIGEKLLELE-PSSSGGYVL 585
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGV 530
+ + G +E K+ + M+ V
Sbjct: 586 LANTYAAEGQWDEFAKVRKRMRERNV 611
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 141/315 (44%), Gaps = 66/315 (20%)
Query: 278 RLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRL 337
R + L+ N I L G++++A +F+ + + + +SYNSMI Y + +++ +
Sbjct: 59 RSSDDALHKRNVEITILGRHGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETV 118
Query: 338 FEKMPHRSIISLNTMIS-------------VIPEM-ERNPVTWNSMISGYVQNNLHEKAL 383
F++MP R++++ + MI V M +RN +W S+ISGY E+AL
Sbjct: 119 FKEMPQRNVVAESAMIDGYAKVGRLDDARKVFDNMTQRNAFSWTSLISGYFSCGKIEEAL 178
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
L+ M E NV T +V +
Sbjct: 179 HLFDQMP---------------------------------------ERNVVSWTMVVLGF 199
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
+R G ++ A F + N+ AWTA++ Y +G SEA LF M E+ N ++
Sbjct: 200 ARNGLMDHAGRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAYKLFLEMPER----NVRSWN 255
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH--YTCVVDLLGRSGHLHEAEEFIKDMP 561
++S C+RA V+E + +F SM P H +T +V L ++ + A ++ MP
Sbjct: 256 IMISGCLRANRVDEAIGLFESM------PDRNHVSWTAMVSGLAQNKMIGIARKYFDLMP 309
Query: 562 IELDAVVWGALLSAC 576
+ D W A+++AC
Sbjct: 310 YK-DMAAWTAMITAC 323
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 184/426 (43%), Gaps = 32/426 (7%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS + RNG + A F MP + +++W M+ Y F E+ L
Sbjct: 186 ERNVVSWTMVVLGFARNGLMDHAGRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAYKLFLE 245
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M NV+ +++ ++S C + N + + + + + + + SGL A
Sbjct: 246 MPERNVR----SWNIMISGCLRANRVDEAIGLFESMPDRNHVSWTAMVSGL----AQNKM 297
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I A++ FD + + W+ M+ V LM +A +F ++P+K+V W +I GYA++
Sbjct: 298 IGIARKYFDLMPYKDMAAWTAMITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARN 357
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
E AL LF M S PNE T SV+ +C E H ++I GFE +
Sbjct: 358 SYVGE-ALNLFVLMLRSCFR-PNETTMTSVVTSC---DGMVELMQAHAMVIHLGFEHNTW 412
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL---- 310
+ ALI Y A V+++L++ + + ++I + G A +F R+
Sbjct: 413 LTNALITLYSKSGDLCSARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQVFARMLVSG 472
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
+ + +++ ++ + G V +RLF+ S+ ++ P+ E ++ ++
Sbjct: 473 IKPDEVTFVGLLSACSHVGLVHQGRRLFD--------SIKGTYNLTPKAEH----YSCLV 520
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPF 429
+ L ++A+ + T+ A R + L AC G + + L++ P
Sbjct: 521 DILGRAGLVDEAMDVVATIPPSA--RDEAVLVALLGACRLHGDVAIANSIGEKLLELEPS 578
Query: 430 ESNVYV 435
S YV
Sbjct: 579 SSGGYV 584
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 190/645 (29%), Positives = 308/645 (47%), Gaps = 93/645 (14%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
F +L C L GK +H L +KS + + + Y+ C + A++ F ++
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ N ++ ++ Y + + A +F ++P+ D+V + LIS YA + AL LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE-TAPALGLFS 129
Query: 207 WMRESGENMPNEYTFDSVIRACAR-LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
MRE G +M + +T +VI AC +G + +H + + GF+ S+ AL+ +Y
Sbjct: 130 GMREMGLDM-DXFTLSAVITACCDDVGLIGQ---LHSVAVSSGFDSYVSVNNALLTYYGK 185
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
D A RV+ MG I D +S+NSMI Y
Sbjct: 186 NGDLDDAKRVF------------------YGMGGIRD------------EVSWNSMIVAY 215
Query: 326 AVYGQVDDSKRLFEKMPHR-------SIISLNTMISVIPEM------------------- 359
+ + + LF++M R ++ S+ T + + ++
Sbjct: 216 GQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275
Query: 360 ----------------------------ERNPVTWNSMISGYVQNN-LHEKALQLYMTMR 390
E + V WN+M+SGY QN E AL+ + M+
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQ 335
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN-VYVGTSLVDMYSRCGSI 449
+ +F + ACS L S QG+ +H+ +K+ SN + V +L+ MYS+CG++
Sbjct: 336 GIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNL 395
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
DA+ F ++ N + +++ GY+ HG+ E++ LF+ MLE+ I P + TF+ VLSAC
Sbjct: 396 QDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSAC 455
Query: 510 VRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
G V EG F MK + + P EHY+C++DLLGR+G L EAE I MP ++
Sbjct: 456 AHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIG 515
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W +LL AC N+E+ +AA ++ L+ + YV+LSN+YA G+W + +RK +
Sbjct: 516 WASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRD 575
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
VKK PGCSWIE+ R+H F ED ++P IY LE ++ +
Sbjct: 576 RGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKM 620
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 136/559 (24%), Positives = 238/559 (42%), Gaps = 100/559 (17%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N I + + + A LFDQ+P +VS+NT++ Y+ + +L L S M
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ ++ T S +++ C LI Q+H + + SG++ + V + LL +Y ++++
Sbjct: 134 MGLDMDXFTLSAVITACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 138 AKRVFDELHE-DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
AKRVF + +E+ W+ M+V Y Q S
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGS----------------------------- 222
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
KAL LF+ M G N+ + +T SV+ A L G HG LIK GF + +G
Sbjct: 223 ---KALGLFQEMVRRGLNV-DMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278
Query: 257 GALIEFYCGC-EAFDGAMRVYDRLENPCLNASNSLINGLISMGR-IEDAELIFNRLT--- 311
LI+ Y C +V++ + P L N++++G +EDA F ++
Sbjct: 279 SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG 338
Query: 312 ------------------------------------EANSISY-NSMIKGYAVYGQVDDS 334
+N IS N++I Y+ G + D+
Sbjct: 339 YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDA 398
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+RLF++M E N V+ NSMI+GY Q+ + ++L L+ M + I
Sbjct: 399 RRLFDRMA-----------------EHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQI 441
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDA 452
T TF + AC+ G +++G + +++K F E + ++D+ R G +++A
Sbjct: 442 APTSITFISVLSACAHTGRVEEG-WNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEA 500
Query: 453 QASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
+ + + +P W +L+ HG AV +L+ + NAA +V + +
Sbjct: 501 ENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLE-PSNAAPYVVLSNMYAS 559
Query: 512 AGLVNEGMKIFRSMKSYGV 530
AG E + + M+ GV
Sbjct: 560 AGRWEEVATVRKFMRDRGV 578
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
I T F L C L G+ LH+ +K+ + Y + +YS+CG + A+
Sbjct: 4 ISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWAR 63
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
+F IS PNV ++ A++ Y+ A LF+ + E D+V ++ ++SA G
Sbjct: 64 KAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLV----SYNTLISAYADCG 119
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVV----DLLGRSGHLH 551
+ +F M+ G+ + V+ D +G G LH
Sbjct: 120 ETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLH 161
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 191/644 (29%), Positives = 308/644 (47%), Gaps = 82/644 (12%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
G + AR LFD++P +N+++ Y E+L L+ M R + NE T +
Sbjct: 57 GGGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFL 116
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L CA++ + H +V+K G+ FVG+ LL YA+ + +++R FDE
Sbjct: 117 LKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDE------ 170
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
M ++VV W +I+GYA++ + +A LF MR
Sbjct: 171 -------------------------MVDRNVVSWNSMINGYAQAGN-TREACSLFEGMRR 204
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G + +E+T S++ AC+ G GK+VH L+ G D + AL++ Y C
Sbjct: 205 QGL-LADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKC---- 259
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
G + A F+ + N++S+ SM+ A
Sbjct: 260 ---------------------------GDLLMAHTCFDMMPFKNAVSWTSMLCALAKRAS 292
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+D ++ FE++P +SIIS WN+MIS YVQ +AL LY M+
Sbjct: 293 IDAARDWFEQIPEKSIIS-----------------WNAMISCYVQGGRFHEALDLYNRMK 335
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
L + T + + AC LG L G+++H + V + SL+DMY+RCG ++
Sbjct: 336 LLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVD 395
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A + FS + S NV +W A++ + HG +A++ F M+ P+ TFV +LSAC
Sbjct: 396 TAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACN 455
Query: 511 RAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
GL+ G F++M+ Y V P +EHY C+VDLLGR G L +A + IKDMP+ D VVW
Sbjct: 456 HGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVW 515
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
GALL AC ++++G++ +++ L+ +V++SN+ +W +RK +
Sbjct: 516 GALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREW 575
Query: 630 EVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+KK+ G S IE NS +H E + + + +Y + L +L
Sbjct: 576 GMKKNMGVSSIETNSNIHESGAEGIGHESSDDMYVGDDRLPHHL 619
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 33/220 (15%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS + + + AR+ F+Q+P ++++SWN M+ Y + +F E+L L + M
Sbjct: 278 VSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLL 337
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ +E T + +LS C QL L GK IH + + + + + LL YA C +++ A
Sbjct: 338 GLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTA 397
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+F E MP K+V+ W +I A
Sbjct: 398 ISLFSE-------------------------------MPSKNVISWNAIIGALAMH-GRA 425
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+ AL FR M S P+E TF +++ AC G G+
Sbjct: 426 QDALMFFRSM-VSDAFPPDEITFVALLSACNHGGLLEAGQ 464
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 31/169 (18%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N + R GQ+ TA +LF +MP + V+SWN ++ + + ++L +M
Sbjct: 382 NSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFP 441
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+E TF +LS C L++ Q + ++ Y V G +E +
Sbjct: 442 PDEITFVALLSACNH-GGLLEAGQYYFQAMRHVYN----VKPG----------VEHYACM 486
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLIS 189
D L +L + A D+ MP + DVVVW L+
Sbjct: 487 VDLLGRGGQL---------------AKAVDLIKDMPMRPDVVVWGALLG 520
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY---SRCGSINDAQASFSSISSPNVAAWT 468
GS+ + LHAHLV + V + ++ Y G + A+ F I P+ +
Sbjct: 23 GSVHRLNQLHAHLVVHGVDD---VTSQILASYCALPAGGGVWYARQLFDRIPDPDRFVYN 79
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
+L+ Y + EA+ L M+ + I+PN T +L AC R M +
Sbjct: 80 SLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKL 139
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G V + ++ +G L ++ F +M ++ + V W ++++
Sbjct: 140 GFVGQVFVGNALLHSYASAGSLGDSRRFFDEM-VDRNVVSWNSMING 185
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 195/699 (27%), Positives = 322/699 (46%), Gaps = 101/699 (14%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK--FDESLSLVSTMHRSNVKLNETTFS 88
+G L A +LFDQ+P V ++N ++ YS + + L L M R V N TF
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
L C+ L G+ IH + +G + FV + LL Y C + +A +F +
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ ML GY + A + M +++ R
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSM------------------------QMQMHRL- 224
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES----------IGGA 258
PN T +++ A+ GA +G VH I+ + + +G A
Sbjct: 225 ------RPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTA 278
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN---------- 308
L++ Y C + A RV+D + ++LI G + R+ A L+F
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 338
Query: 309 ------------------RLTE------------ANSISYNSMIKGYAVYGQVDDSKRLF 338
R+ E A+ + NS++ YA G +D + LF
Sbjct: 339 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 398
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
++M ++ V++++++SGYVQN E+A ++ M+ ++
Sbjct: 399 DEM-----------------AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDA 441
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
+T L ACS L +LQ G+ H ++ S + +L+DMY++CG I+ ++ F+
Sbjct: 442 ATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNM 501
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ S ++ +W ++ GY HGLG EA LF M P+ TF+ +LSAC +GLV EG
Sbjct: 502 MPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEG 561
Query: 519 MKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
F M+ YG+ P +EHY C+VDLL R G L EA EFI+ MP+ D VW ALL AC
Sbjct: 562 KHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACR 621
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
+ N+++G++ ++ + L + +V+LSNIY+ G++ + ++R KK PGC
Sbjct: 622 VYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGC 681
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
SWIE+N +HAF D+++P IY L+++ + +
Sbjct: 682 SWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKL 720
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 82/159 (51%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ + N ++ + G + A LFD+M ++ VS++ ++ GY + + +E+ + M
Sbjct: 375 LTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 434
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
NV+ + T +++ C+ L +L G+ H V+ G + + L+ YA C I+
Sbjct: 435 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 494
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM 176
+++VF+ + + + W+ M+ GY L +A +F++M
Sbjct: 495 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEM 533
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 117/295 (39%), Gaps = 47/295 (15%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I + G++ +R +F+ MP R +VSWNTM+ GY E+ +L M+
Sbjct: 480 NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFP 539
Query: 82 LNETTFSTILSVCAQLNSLIDGKQ-IHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ TF +LS C+ +I+GK H V++ GY GL +E
Sbjct: 540 PDGVTFICLLSACSHSGLVIEGKHWFH--VMRHGY--------GL------TPRMEHYIC 583
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVDGCE 199
+ D L + +A++ MP + DV VW L+ G + +
Sbjct: 584 MVDLLSRG---------------GFLDEAYEFIQSMPLRADVRVWVALL-GACRVYKNID 627
Query: 200 KALKLFRWMRESG-ENMPNEYTFDSVIRACARLGAFCEGKV---VHGLLIKCGFEFDESI 255
K+ R ++E G E N ++ A R E ++ V G G + E I
Sbjct: 628 LGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIE-I 686
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
G+L F G ++ + +Y L+N ++ G+ +G D + L
Sbjct: 687 NGSLHAFVGGDQSHPQSPEIYRELDN--------ILVGIKKLGYQPDTSFVLQDL 733
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/614 (29%), Positives = 312/614 (50%), Gaps = 58/614 (9%)
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYEC-----FEFVGSG-----LLFFYANCFEIEEAKR 140
LS+ Q + + QIH +L++ E +F+ + L Y I A+R
Sbjct: 156 LSLLQQSKTRANLLQIHAFMLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARR 215
Query: 141 VFDEL-HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+FD H D+ L + M+ YV S++F
Sbjct: 216 MFDHRPHRDDAFLCNSMIKAYVGMRQYSESF----------------------------- 246
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
L+R +R + P+ +TF + ++CA A EG+ +H ++ GF D AL
Sbjct: 247 ---ALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATAL 303
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYN 319
++ Y D A +++D + + + +LI G + G +++A +F+++ E +S ++N
Sbjct: 304 VDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFN 363
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ERNPVT 365
+MI Y G + +++LF++MP RS++S MI S+ M E+N +
Sbjct: 364 TMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFS 423
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKL-AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
WN+MISGY QN +AL+L+ M+ +++ T + A + LG+L G +H +
Sbjct: 424 WNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFV 483
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
+ + VGT+L+DMY++CG I ++ F ++ A+W AL+N ++ +G EA+
Sbjct: 484 RRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEAL 543
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
LF M + +PN T +GVLSAC +GLV EG + F++M+ +G+ P +EHY C+VDLL
Sbjct: 544 GLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEEFGLTPKIEHYGCMVDLL 603
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L EAE+ ++ MP E + ++ + L AC + ++ ER ++ ++ Y+
Sbjct: 604 GRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYI 663
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+L N+YA +W + +++ + VKK+ GCS IE++SRV F DR +P I++
Sbjct: 664 MLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHS 723
Query: 665 TLEHLTANLNSVVL 678
L L ++ L
Sbjct: 724 VLGQLWVHMKGTRL 737
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 168/409 (41%), Gaps = 87/409 (21%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ AR LFD+M R+ VSW ++ GY + D + L M I
Sbjct: 311 GKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM--------------IE 356
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
A N++ID Y ++ A+++FDE+ E + +
Sbjct: 357 KDSAAFNTMIDA-------------------------YVKLGDMCSARKLFDEMPERSVV 391
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W++M+ GY + A +F MP+K++ W +ISGY ++ E ALKLF M+ +
Sbjct: 392 SWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYE-ALKLFHEMQST 450
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T SV+ A A LGA G VH + + + ++G ALI+ Y C
Sbjct: 451 TSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKC----- 505
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
G I + +F+ + E + S+N++I +A+ G+
Sbjct: 506 --------------------------GEIVKSRGVFDNMPEKETASWNALINAFAINGRA 539
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
++ LF +M H+ + N +T ++S + L E+ + + M +
Sbjct: 540 KEALGLFMEMNHKGFMP-------------NEITMIGVLSACNHSGLVEEGKRWFKAMEE 586
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+ + + G LQ+ + L + P+E+N + +S +
Sbjct: 587 FGLTPKIEHYGCMVDLLGRAGCLQEAEKL---MESMPYEANGIILSSFL 632
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 104/226 (46%), Gaps = 36/226 (15%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS I NG L +AR+LFD MP + + SWN M+ GY + + E+L L
Sbjct: 387 ERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHE 446
Query: 75 MHRS-NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M + +++ +E T ++L A L +L G +H V + + VG+ L+ YA C
Sbjct: 447 MQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCG 506
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
EI +++ VFD MP+K+ W LI+ +A
Sbjct: 507 EIVKSRGVFD-------------------------------NMPEKETASWNALINAFA- 534
Query: 194 SVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
++G ++AL LF M G MPNE T V+ AC G EGK
Sbjct: 535 -INGRAKEALGLFMEMNHKG-FMPNEITMIGVLSACNHSGLVEEGK 578
>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 197/652 (30%), Positives = 317/652 (48%), Gaps = 53/652 (8%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G A+ +FD++ + +V+WN+M+ +++ E++ M V + T S
Sbjct: 227 GKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLS 286
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+ LS A L+ + +GKQ H L + SG E +GS L+ FY+
Sbjct: 287 SFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYS------------------ 328
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ L+ DA VF +M +KD V W L+SGY + ++AL L M
Sbjct: 329 -------------KVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHN-GLVDRALDLCHVM 374
Query: 209 RESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
+ EN+ + T S++ A A GK H ++ E D ++ ++I+ Y CE
Sbjct: 375 QS--ENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCE 432
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIK 323
+ A RV+D L N+L+ G + +F ++ N IS+NS+I
Sbjct: 433 KLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVIL 492
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
G G+VD +K F +M + + P N +TW ++I G QN L ++A
Sbjct: 493 GLLNKGKVDQAKDTFMEMQS---------LGICP----NLITWTTLICGLAQNGLGDEAF 539
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+ +M + I + S L ACS + SL G+ +H ++ + + V SLV+MY
Sbjct: 540 LTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMY 599
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++CGSIN A+ F I + + A+++GY+ HG EA+ LF + E+ I P+ TF
Sbjct: 600 AKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFT 659
Query: 504 GVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+LSAC AGLV EG+++F M S + +V EHY C+V +L RS +L EA I MP
Sbjct: 660 SILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILGMPF 719
Query: 563 ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
E DA ++G+LL+AC + E+ ER +++ L+ YV LSN YA G W + +
Sbjct: 720 EPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKV 779
Query: 623 RKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
R + + K PG S I++ ++ H F D+++ IY L L +
Sbjct: 780 RGLMKERSLSKIPGHSLIQIGNKTHVFFAGDKSHSRTKEIYMMLALLRVEMQ 831
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 132/571 (23%), Positives = 235/571 (41%), Gaps = 122/571 (21%)
Query: 41 FDQMPIRTVVSWNTMLCGYS---KWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQL 97
F Q+ +S+ + L S K E+L LV+ + ++ + + +L C
Sbjct: 32 FSQIASNVQISYKSYLNHISSLCKQGHLLEALDLVTDLELEDITIGPDVYGELLQGCVYE 91
Query: 98 NSLIDGKQIHCLVLKSGYECF--EFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+L G+QIH +LK+G E++ + L+ FY+ C E E A R+F +L NE W+
Sbjct: 92 RALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFSWAA 151
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
++ G + ++AL FR M E G +
Sbjct: 152 IM--------------------------------GLKSRMGFNQEALMGFREMHEYGLLL 179
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
N + +A L GK VH ++K G +GG
Sbjct: 180 DN-FVIPIAFKASGALRWIGFGKSVHAYVVKMG------LGG------------------ 214
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
C+ + SL++ G E+A+ +F+++ E N +++NSMI + G ++
Sbjct: 215 -------CIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAV 267
Query: 336 RLFEKM------PHR----SIISLNTMISVIPE--------------------------- 358
F +M P + S +S + +SVI E
Sbjct: 268 ETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFY 327
Query: 359 ----------------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
+E++ VTWN ++SGYV N L ++AL L M+ + T +
Sbjct: 328 SKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLA 387
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ A + +L+ G+ H+ V+ ES+V V +S++DMY++C + A+ F + +
Sbjct: 388 SIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKR 447
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
++ W L+ Y+ G E + LF M + + PN ++ V+ + G V++ F
Sbjct: 448 DLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTF 507
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
M+S G+ P L +T ++ L ++G EA
Sbjct: 508 MEMQSLGICPNLITWTTLICGLAQNGLGDEA 538
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 176/402 (43%), Gaps = 69/402 (17%)
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEF--DESIGGALIEFYCGCEAFDGAMRVYD 277
+ +++ C A G+ +HG ++K G +E I L+ FY C+ + A R++
Sbjct: 80 VYGELLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFG 139
Query: 278 RLENPCLNASNSLINGLIS-MGRIEDAELIFNRLTEANSISYN----------------- 319
+L+ S + I GL S MG ++A + F + E + N
Sbjct: 140 KLQVQN-EFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIG 198
Query: 320 ----------------------SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
S++ Y G +++K++F+K+
Sbjct: 199 FGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKI---------------- 242
Query: 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
+E+N V WNSMI + QN L+ +A++ + MR + T+ T S A + L + +G
Sbjct: 243 -LEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEG 301
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+ HA V + E +G+SL++ YS+ G + DA+ FS + + W L++GY H+
Sbjct: 302 KQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHN 361
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH- 536
GL A+ L +M +++ ++ T +++A + +K+ + S+ V LE
Sbjct: 362 GLVDRALDLCHVMQSENLRFDSVTLASIMAAAADS----RNLKLGKEGHSFCVRNNLESD 417
Query: 537 ---YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ ++D+ + L E + D + D ++W LL+A
Sbjct: 418 VAVASSIIDMYAKCEKL-ECARRVFDATAKRDLIMWNTLLAA 458
>gi|147859671|emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]
Length = 833
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 202/655 (30%), Positives = 332/655 (50%), Gaps = 63/655 (9%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I++C RNG A+ LFD+MP R V++N M+ GY + F E +SL M ++
Sbjct: 199 NSRISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDI- 257
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+++T+++ + + +I + + + SG Y + I EA RV
Sbjct: 258 ---FSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISG----YVSNGLIGEALRV 310
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F + + + W+L++ G V + A + F +M +D+ WT +ISG A S +A
Sbjct: 311 FSGMVLKDVVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLA-SAGRIVEA 369
Query: 202 LKLFRWMRESGENMP--NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE-FDESIGGA 258
LF E+MP + ++++I G G+V+ + + F ++E I G
Sbjct: 370 RGLF-------EDMPVRDVRAWNTMIAGYLENGCIEIGEVLFQKMPQRDFRSWNEMINGL 422
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
+ + AMR++ + C + NS++ GLI G I++A + ++++S+
Sbjct: 423 VRN-----QRIQNAMRLFVEMPQKCRRSWNSIVFGLIRNGLIKEAHAFLEKSPFSDTVSW 477
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
++I GY G+VD + +FE MP R+ WN +I G +N+
Sbjct: 478 TNLIVGYFETGEVDTAVSIFELMP-----------------ARDATAWNVIIWGLGENDH 520
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
E+ L+ ++ M++ +TF+ + CS L +L G+ +HA + KT F V V +
Sbjct: 521 GEEGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNA 580
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
+V +Y+RCG+ N A FSS++S +V +W +++ G +H+G G EA+ +FE M DI PN
Sbjct: 581 MVTLYARCGNSNSALLLFSSMTSHDVISWNSIICGLAHNGNGVEAIEMFEKMRSTDIKPN 640
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV-PTLEHYTCVVDLLGRSGHLHEAEEFI 557
TFVGVLSAC AGLV++G F MK + PT+EHYTC+VDLLGR G + EA F+
Sbjct: 641 RITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLGRFGLIDEAMSFL 700
Query: 558 KDMP---IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG 614
+ M +E+ A VWGA+L AC N++VGE A +++ ++
Sbjct: 701 RQMEANGVEVPASVWGAVLGACRIHKNIQVGEIAGERILEIEPHNFC------------- 747
Query: 615 KWGKKMDIRK---RLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
GK+ D + R+ VKK P CSW+E+N H F D ++P + + L
Sbjct: 748 --GKREDAERVWVRMREKGVKKQPACSWMEVNGSGHVFLSGDSSHPQFSRVCGVL 800
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 146/304 (48%), Gaps = 31/304 (10%)
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
L NS I+ + G E+A+++F+ + + N+++YN+MI+GY G + LF++MP
Sbjct: 195 LKPLNSRISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPE 254
Query: 344 RSIISLNTMIS-------------VIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTM 389
R I S NTMI+ + +M R+ V+WNSMISGYV N L +AL+++ M
Sbjct: 255 RDIFSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGM 314
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+ + +++++ +G + L K ++ T+++ + G I
Sbjct: 315 ----VLKDVVSWNLVIAGLVGVGKVD----LAEEFFKEMGTRDIASWTTMISGLASAGRI 366
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+A+ F + +V AW ++ GY +G +LF+ M ++D ++ +++
Sbjct: 367 VEARGLFEDMPVRDVRAWNTMIAGYLENGCIEIGEVLFQKMPQRDF----RSWNEMINGL 422
Query: 510 VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
VR + M++F M + +V L R+G + EA F++ P D V W
Sbjct: 423 VRNQRIQNAMRLFVEMPQ----KCRRSWNSIVFGLIRNGLIKEAHAFLEKSPFS-DTVSW 477
Query: 570 GALL 573
L+
Sbjct: 478 TNLI 481
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 212/492 (43%), Gaps = 49/492 (9%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E I S N I + G + A +F +MP R VVSWN+M+ GY E+L + S
Sbjct: 254 ERDIFSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSG 313
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M +V +++ +++ + + ++ + + + SGL A+
Sbjct: 314 MVLKDV----VSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGL----ASAGR 365
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I EA+ +F+++ + W+ M+ GY++ + +F KMP++D W ++I+G ++
Sbjct: 366 IVEARGLFEDMPVRDVRAWNTMIAGYLENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRN 425
Query: 195 VDGCEKALKLFRWMRESGENMPNE--YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+ A++LF MP + +++S++ R G E H L K F
Sbjct: 426 -QRIQNAMRLF-------VEMPQKCRRSWNSIVFGLIRNGLIKE---AHAFLEKSPFSDT 474
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
S ++ ++ E D A+ +++ + A N +I GL E+ F ++ E
Sbjct: 475 VSWTNLIVGYFETGEV-DTAVSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKE 533
Query: 313 A----NSISYNSMIK----------GYAVYGQVDDSKRLFEKMPHRSIISL-------NT 351
+ ++ S++ G ++ QV + + ++++L N+
Sbjct: 534 GGPFPDEATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNS 593
Query: 352 MISVIPEMERNPV-TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
+ + M + V +WNS+I G N +A++++ MR I R TF + ACS
Sbjct: 594 ALLLFSSMTSHDVISWNSIICGLAHNGNGVEAIEMFEKMRSTDIKPNRITFVGVLSACSH 653
Query: 411 LGSLQQGQLLHAHL-VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV----A 465
G + QG+ + K E + T +VD+ R G I++A + + + V +
Sbjct: 654 AGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLGRFGLIDEAMSFLRQMEANGVEVPAS 713
Query: 466 AWTALMNGYSHH 477
W A++ H
Sbjct: 714 VWGAVLGACRIH 725
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/571 (30%), Positives = 302/571 (52%), Gaps = 67/571 (11%)
Query: 123 SGLLFFYANCFEIEEAKRVF-DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+ L+ Y+ C ++EEA VF D HE N ++ ++ G+V L +D F
Sbjct: 14 TSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGF----------- 62
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
+ ++ MR G MP+++TF V+RAC F E + +H
Sbjct: 63 ---------------------QFYKRMRSVGV-MPDKFTFPCVVRACCE---FMEVRKIH 97
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
G L K G E + +G AL+ Y + + A +V++ L + N++ING +G +
Sbjct: 98 GCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLN 157
Query: 302 DAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRL---FEKMPHRSIISL-NTMI 353
A ++F R+ E + + S++ G +++ + + KM + S +++ N +I
Sbjct: 158 KAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALI 217
Query: 354 SV------------IPEM--ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+ I EM E++ +WNS+IS + Q + H+ L+L+ M +
Sbjct: 218 DMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVI 277
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN-----VYVGTSLVDMYSRCGSINDAQA 454
T + + ACS L +L G+ +H +++ N V + +++DMY++CG + +A
Sbjct: 278 TITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADI 337
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F + + +VA+W ++ GY+ HG G+EA+ +F M E I P+ TFVGVLSAC AG
Sbjct: 338 IFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGF 397
Query: 515 VNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V++G M+ +GV+PT+EHYTC++D+LGR+GHL EA + + +P+E + ++W ALL
Sbjct: 398 VHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALL 457
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPI--SAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
AC N E+G +K+ L+ K +Y+++S++Y V+G++ + +++R+ + V
Sbjct: 458 GACRLHGNAELGNVVGEKITQLEPKHCGSGSYILMSSLYGVVGRYEEALEVRRTMKEQNV 517
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
KK PGCSWIEL ++ FS+ DR + N +
Sbjct: 518 KKTPGCSWIELKDGLYVFSMGDRTHHELNAL 548
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/505 (20%), Positives = 198/505 (39%), Gaps = 120/505 (23%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A +F+++P R VV WN M+ GY+K ++++ + M + L+ T ++ILS+
Sbjct: 128 AEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTS 187
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ + +G+ IH +V K GY V + L+ Y C E+A +F+ ++E + W+ +
Sbjct: 188 MGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSI 247
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ + QC+ +F KM V +P
Sbjct: 248 ISAHEQCDDHDGTLRLFGKMLGSRV---------------------------------LP 274
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+ T +V+ AC+ L A G+ +HG +I G +E+ L+
Sbjct: 275 DVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLL---------------- 318
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
+N++++ G +++A++IF+ + + S+N MI GYA++G ++
Sbjct: 319 ----------NNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALD 368
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F +M I P++
Sbjct: 369 MFHRMCEAQI---------KPDV------------------------------------- 382
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG----TSLVDMYSRCGSINDA 452
TF + ACS G + QG+ + L + E V T ++DM R G + +A
Sbjct: 383 --VTFVGVLSACSHAGFVHQGR---SFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEA 437
Query: 453 QASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP---NAATFVGVLSA 508
I N+ W AL+ HG ++ E + + + P + +++ + S
Sbjct: 438 YDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKITQLE--PKHCGSGSYILMSSL 495
Query: 509 CVRAGLVNEGMKIFRSMKSYGVVPT 533
G E +++ R+MK V T
Sbjct: 496 YGVVGRYEEALEVRRTMKEQNVKKT 520
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Query: 10 TLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL 69
T M + + +N I G+ A +F+ + + + SWN+++ + + D +L
Sbjct: 202 TKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTL 261
Query: 70 SLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE-----FVGSG 124
L M S V + T + +L C+ L +L+ G++IH ++ +G E + +
Sbjct: 262 RLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNA 321
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKD 180
++ YA C ++ A +FD + + W++M++GY ++A D+F +M K D
Sbjct: 322 IMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPD 381
Query: 181 VVVWTKLIS 189
VV + ++S
Sbjct: 382 VVTFVGVLS 390
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 19 VSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
V N AI + + G + A +FD M + V SWN M+ GY+ E+L + M
Sbjct: 316 VLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCE 375
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGK 104
+ +K + TF +LS C+ + G+
Sbjct: 376 AQIKPDVVTFVGVLSACSHAGFVHQGR 402
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 190/645 (29%), Positives = 308/645 (47%), Gaps = 93/645 (14%)
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
F +L C L GK +H L +KS + + + Y+ C + A++ F ++
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ N ++ ++ Y + + A +F ++P+ D+V + LIS YA + AL LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE-TAPALGLFS 129
Query: 207 WMRESGENMPNEYTFDSVIRACAR-LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
MRE G +M + +T +VI AC +G + +H + + GF+ S+ AL+ +Y
Sbjct: 130 GMREMGLDM-DGFTLSAVITACCDDVGLIGQ---LHSVAVSSGFDSYVSVNNALLTYYGK 185
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
D A RV+ MG I D +S+NSMI Y
Sbjct: 186 NGDLDDAKRVF------------------YGMGGIRD------------EVSWNSMIVAY 215
Query: 326 AVYGQVDDSKRLFEKMPHR-------SIISLNTMISVIPEM------------------- 359
+ + + LF++M R ++ S+ T + + ++
Sbjct: 216 GQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275
Query: 360 ----------------------------ERNPVTWNSMISGYVQNN-LHEKALQLYMTMR 390
E + V WN+M+SGY QN E AL+ + M+
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQ 335
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN-VYVGTSLVDMYSRCGSI 449
+ +F + ACS L S QG+ +H+ +K+ SN + V +L+ MYS+CG++
Sbjct: 336 GIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNL 395
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
DA+ F ++ N + +++ GY+ HG+ E++ LF+ MLE+ I P + TF+ VLSAC
Sbjct: 396 QDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSAC 455
Query: 510 VRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
G V EG F MK + + P EHY+C++DLLGR+G L EAE I MP ++
Sbjct: 456 AHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIG 515
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W +LL AC N+E+ +AA ++ L+ + YV+LSN+YA G+W + +RK +
Sbjct: 516 WASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRD 575
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
VKK PGCSWIE+ R+H F ED ++P IY LE ++ +
Sbjct: 576 RGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKM 620
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 136/559 (24%), Positives = 238/559 (42%), Gaps = 100/559 (17%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N I + + + A LFDQ+P +VS+NT++ Y+ + +L L S M
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ ++ T S +++ C LI Q+H + + SG++ + V + LL +Y ++++
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 138 AKRVFDELHE-DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
AKRVF + +E+ W+ M+V Y Q S
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGS----------------------------- 222
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
KAL LF+ M G N+ + +T SV+ A L G HG LIK GF + +G
Sbjct: 223 ---KALGLFQEMVRRGLNV-DMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278
Query: 257 GALIEFYCGC-EAFDGAMRVYDRLENPCLNASNSLINGLISMGR-IEDAELIFNRLT--- 311
LI+ Y C +V++ + P L N++++G +EDA F ++
Sbjct: 279 SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG 338
Query: 312 ------------------------------------EANSISY-NSMIKGYAVYGQVDDS 334
+N IS N++I Y+ G + D+
Sbjct: 339 YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDA 398
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+RLF++M E N V+ NSMI+GY Q+ + ++L L+ M + I
Sbjct: 399 RRLFDRMA-----------------EHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQI 441
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDA 452
T TF + AC+ G +++G + +++K F E + ++D+ R G +++A
Sbjct: 442 APTSITFISVLSACAHTGRVEEG-WNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEA 500
Query: 453 QASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
+ + + +P W +L+ HG AV +L+ + NAA +V + +
Sbjct: 501 ENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLE-PSNAAPYVVLSNMYAS 559
Query: 512 AGLVNEGMKIFRSMKSYGV 530
AG E + + M+ GV
Sbjct: 560 AGRWEEVATVRKFMRDRGV 578
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
I T F L C L G+ LH+ +K+ + Y + +YS+CG + A+
Sbjct: 4 ISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWAR 63
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
+F IS PNV ++ A++ Y+ A LF+ + E D+V ++ ++SA G
Sbjct: 64 KAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLV----SYNTLISAYADCG 119
Query: 514 LVNEGMKIFRSMKSYGV 530
+ +F M+ G+
Sbjct: 120 ETAPALGLFSGMREMGL 136
>gi|345505214|gb|AEN99831.1| chlororespiratory reduction 4 [Brassica rapa]
Length = 612
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 279/525 (53%), Gaps = 60/525 (11%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+D +W +I ++ VD KAL L M E+G + ++++F ++AC+RLG EG
Sbjct: 91 EDPFLWNVVIKSHSHGVDP-RKALFLLCLMLENGVPV-DKFSFSLALKACSRLGFVKEGT 148
Query: 239 VVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
VHG LIK G D + LI Y CGC F A +V+DR+ + NS+I+G +
Sbjct: 149 QVHGFLIKTGTWSDLFLQNCLIGLYIKCGCLGF--ARQVFDRMPQRDSVSYNSMIDGYLK 206
Query: 297 MGRIEDA-EL---------------------------------IFNRLTEANSISYNSMI 322
G +E A EL +F+ + E + IS+NSMI
Sbjct: 207 CGLVESAGELFGLMPREKRNLITWNSMIGGYAQRADGVNVAAKLFDEMPEKDLISWNSMI 266
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ERNPVTWNS 368
GY +G+++D+K LF+ MP R +++ MI ++ +M R+ V +NS
Sbjct: 267 GGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHEAKTLFDQMPHRDVVVYNS 326
Query: 369 MISGYVQNNLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
M+SG VQN H +AL+++ M K L D T + ++ A + LG L + +H ++V
Sbjct: 327 MMSGXVQNRYHMEALEVFNHMEKESHLTPDET--SLVIVLSAXAQLGRLSKAIDMHLYIV 384
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ F S+ +G +L+DMYS+CGSI A F I S ++ W A++ G + HGLG A
Sbjct: 385 EKQFPSSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFD 444
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
+ + + I P+ TFVGVL+AC +GLV EG+ F M + + + P L+HY C+VD+L
Sbjct: 445 MLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDIL 504
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
RSG + A+ I+ MPIE + V+W L+AC E GE A+ + S+YV
Sbjct: 505 ARSGSIELAKNLIEGMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYV 564
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+LSN+YA G W +R + ++K PGCSWIEL+ RVH F
Sbjct: 565 LLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWIELDGRVHEF 609
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 202/438 (46%), Gaps = 28/438 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+MP R VS+N+M+ GY K + + L M R K N T+++++
Sbjct: 177 GCLGFARQVFDRMPQRDSVSYNSMIDGYLKCGLVESAGELFGLMPRE--KRNLITWNSMI 234
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
AQ DG + + E + ++ Y IE+AK +FD + + +
Sbjct: 235 GGYAQ---RADGVNVAAKLFDEMPEKDLISWNSMIGGYVKHGRIEDAKGLFDVMPRRDVV 291
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W++M+ GY + L+ +A +F +MP +DVVV+ ++SG ++ E AL++F M +
Sbjct: 292 TWAIMIDGYGKLGLVHEAKTLFDQMPHRDVVVYNSMMSGXVQNRYHME-ALEVFNHMEKE 350
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E + V+ A A+LG + +H +++ F +G ALI+ Y C +
Sbjct: 351 SHLTPDETSLVIVLSAXAQLGRLSKAIDMHLYIVEKQFPSSGKLGVALIDMYSKCGSIQH 410
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSISYNSMIKGYAV 327
AMRV++ +E+ ++ N++I GL G E A I R + + I++ ++ +
Sbjct: 411 AMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVLNACSH 470
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V + FE M + I P ++ + M+ ++ E A L
Sbjct: 471 SGLVKEGLLCFELMRRKHKIE--------PRLQH----YGCMVDILARSGSIELAKNL-- 516
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRC 446
+ + I+ + ACS + G+L+ HL+ + + + YV L +MY+
Sbjct: 517 -IEGMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYV--LLSNMYASN 573
Query: 447 GSINDAQASFSSISSPNV 464
G D + + + N+
Sbjct: 574 GMWKDVRRVRTMMKEKNI 591
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 6/211 (2%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-SNVKLNETTF 87
G+ G + A+ LFDQMP R VV +N+M+ G + E+L + + M + S++ +ET+
Sbjct: 301 GKLGLVHEAKTLFDQMPHRDVVVYNSMMSGXVQNRYHMEALEVFNHMEKESHLTPDETSL 360
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
+LS AQL L +H +++ + +G L+ Y+ C I+ A RVF+ +
Sbjct: 361 VIVLSAXAQLGRLSKAIDMHLYIVEKQFPSSGKLGVALIDMYSKCGSIQHAMRVFEGIES 420
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAKSVDGCEKALK 203
+ W+ M+ G L AFD+ +++ ++ D + + +++ + S ++ L
Sbjct: 421 KSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVLNACSHS-GLVKEGLL 479
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAF 234
F MR + P + ++ AR G+
Sbjct: 480 CFELMRRKHKIEPRLQHYGCMVDILARSGSI 510
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 197/683 (28%), Positives = 331/683 (48%), Gaps = 91/683 (13%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
R +F+ + WN M+ Y + + +L +M + + + T+ ++ C+
Sbjct: 31 TRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSI 90
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
S + KQ+H VLK G++ +V + L+ ++ C + +A RVF+E + + W+ +
Sbjct: 91 RRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSI 150
Query: 157 LVGYVQCNLMSDAFDVFIKMP-------------------------------KKDVVVWT 185
L GY++ + +A ++ +MP +KD+V W+
Sbjct: 151 LAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWS 210
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
LI+ + ++ + E+A++ F M + G M +E S + ACA L GK++H L +
Sbjct: 211 ALIACFQQN-EMYEEAIRTFVGMHKIGV-MVDEVVAVSALSACANLLVVNMGKLIHSLSL 268
Query: 246 KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL 305
K G E ++ ALI Y C A +++D L + NS+I+G + +++A+
Sbjct: 269 KIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKA 328
Query: 306 IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
IF+ + E + +S++SMI GYA D++ LF++M
Sbjct: 329 IFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQ----------------------- 365
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
+SG+ + +T + AC+ L +L+QG+ +HA++
Sbjct: 366 ----MSGFKPD---------------------ETTLVSVISACARLAALEQGKWVHAYIK 400
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ NV +GT+L+DMY +CG + A F + ++ W AL+ G + +GL ++
Sbjct: 401 RNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLD 460
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
+F M + + PN TF+GVL AC GLV+EG F SM + + P ++HY C+VDLL
Sbjct: 461 MFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLL 520
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L EAEE + MP+ D WGALL AC + E+G R +K+ L +V
Sbjct: 521 GRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHV 580
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI-- 662
+LSNIYA GKW ++IR +T V K PGCS IE N +H F D+ +P+ + I
Sbjct: 581 LLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIED 640
Query: 663 -------YATLEHLTANLNSVVL 678
LE T ++N V+L
Sbjct: 641 MLVEMAMKLKLEGYTPDINEVLL 663
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 188/341 (55%), Gaps = 6/341 (1%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E I+++N I G G +V A LFD+M + +V+W+ ++ + + ++E++
Sbjct: 172 ERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVG 231
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
MH+ V ++E + LS CA L + GK IH L LK G E + + + L++ Y+ C +
Sbjct: 232 MHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGD 291
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I A+++FDE + + + W+ M+ GY++CNL+ +A +F MP+KDVV W+ +ISGYA++
Sbjct: 292 IMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQN 351
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
D ++ L LF+ M+ SG P+E T SVI ACARL A +GK VH + + G +
Sbjct: 352 -DLFDETLALFQEMQMSGFK-PDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI 409
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-- 312
+G LI+ Y C + A+ V+ + ++ N+LI GL G +E + +F+ + +
Sbjct: 410 LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 469
Query: 313 --ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
N I++ ++ G VD+ + F M H I N
Sbjct: 470 VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNV 510
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 222/473 (46%), Gaps = 86/473 (18%)
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
I+ +R+F+ + N +W++M+ Y+Q N AF ++ M +S Y
Sbjct: 27 HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSM-----------LSNYLG 75
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ + YT+ +I+AC+ + E K VH ++K GF+ D
Sbjct: 76 A----------------------DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDV 113
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRLT 311
+ LI + C A RV++ E+ L++ NS++ G I +G +E+A+ I++++
Sbjct: 114 YVRNTLINCFSVCSNMTDACRVFN--ESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 171
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
E + I+ NSMI + + G V ++ +LF++M +E++ VTW+++I+
Sbjct: 172 ERSIIASNSMIVLFGMRGLVVEACKLFDEM-----------------LEKDMVTWSALIA 214
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
+ QN ++E+A++ ++ M K+ + AC+ L + G+L+H+ +K ES
Sbjct: 215 CFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTES 274
Query: 432 NVYVGTSLVDMYSRCGSI-------------------------------NDAQASFSSIS 460
+ + +L+ MYS+CG I ++A+A F S+
Sbjct: 275 YINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMP 334
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+V +W+++++GY+ + L E + LF+ M P+ T V V+SAC R + +G
Sbjct: 335 EKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKW 394
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ +K G+ + T ++D+ + G + A E M IE W AL+
Sbjct: 395 VHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALI 446
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 16/249 (6%)
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMER-NPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+ RL + H I ++ + +E N WN MI Y+Q N A LY +M
Sbjct: 13 ASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSN 72
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ T+ +L ACS S + + +H H++K F+S+VYV +L++ +S C ++ DA
Sbjct: 73 YLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDA 132
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV--GVLSACV 510
F+ S + +W +++ GY G EA ++ M E+ I+ + + V G+
Sbjct: 133 CRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGM----- 187
Query: 511 RAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA-EEFI--KDMPIELDAV 567
GLV E K+F M +V ++ ++ ++ EA F+ + + +D V
Sbjct: 188 -RGLVVEACKLFDEMLEKDMVT----WSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEV 242
Query: 568 VWGALLSAC 576
V + LSAC
Sbjct: 243 VAVSALSAC 251
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 195/667 (29%), Positives = 333/667 (49%), Gaps = 58/667 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I G+ G L A LFD+MP + ++SWN+++ G+S+ + E+ ++ S
Sbjct: 249 NAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDG 308
Query: 82 L--NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
L + T T+L VC+ ++ G IH + +K G V + L+ Y+ C + EA
Sbjct: 309 LIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAA 368
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+F ++ + + W+ M+ Y + + + FD+ KM
Sbjct: 369 ILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKM----------------------- 405
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
WM E + NE T +++ AC + +HG ++ F++ E I A
Sbjct: 406 -------WMEEELMEV-NEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAF 457
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANS 315
I Y C + A V+ + +++ N++I G G A + +T +
Sbjct: 458 IAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDD 517
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV------------------IP 357
S S++ G + K + R+ + +N+ ++V
Sbjct: 518 FSIVSLLLACGRLGLLQYGKEI-HGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFE 576
Query: 358 EM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
M ++N V WN+M+SGY QN L +AL L+ M ++ + + ACS L +L
Sbjct: 577 RMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGL 636
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +H +K + +V SL+DMY++ G + +Q F+ ++ VA+W ++ G+
Sbjct: 637 GKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGV 696
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLE 535
HG G++AV LFE M D P+ TF+GVL AC AGLV+EG+ M++ Y + P LE
Sbjct: 697 HGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELE 756
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
HY CV+D+LGR+G L+EA FI +MP E DA +W +LLS+ ++++E+GE+ A+K+ L
Sbjct: 757 HYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLAL 816
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN 655
+ +Y++LSN+YA GKW +R+++ L ++KD GCSWIEL +V++F + +
Sbjct: 817 EANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENS 876
Query: 656 NPNCNVI 662
NP+ + I
Sbjct: 877 NPSSDEI 883
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 124/533 (23%), Positives = 226/533 (42%), Gaps = 92/533 (17%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL-SLVSTMHRSNVKLNETTFSTI 90
G + +R +FD++ + + WN ++ GY + +DE++ + + + + + + TF +
Sbjct: 157 GYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCL 216
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
+ C + GK +H + +K G FVG+ ++ Y C ++EA +FD++ E N
Sbjct: 217 IKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQN- 275
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
++ W LI G++++ E A + FR + E
Sbjct: 276 ------------------------------LISWNSLIRGFSENGFWLE-AYRAFRSLLE 304
Query: 211 SGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
SG+ + P+ T +++ C+ G G V+HG+ +K G + + ALI+ Y C
Sbjct: 305 SGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCL 364
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRI----------------------------- 300
A ++ ++EN + + NS+I G +
Sbjct: 365 SEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLP 424
Query: 301 ---EDAELIFNRLTEANSISY---------NSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
E++EL+ R S+ + N+ I YA G + ++ +F M +S+ S
Sbjct: 425 ACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSS 484
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
WN++I G+ QN KAL Y M +L I + L AC
Sbjct: 485 -----------------WNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLAC 527
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
LG LQ G+ +H +++ E N +V SL+ +Y C + F + N W
Sbjct: 528 GRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWN 587
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
A+++GYS + L +EA+ LF ML + P+ +L AC + + G ++
Sbjct: 588 AMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEV 640
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 200/454 (44%), Gaps = 44/454 (9%)
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
++ Y C ++ VF ++ K++ W L+SGY ++ + ++A+ F + E
Sbjct: 149 LITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRN-ELYDEAIHTFLELISVTEFQ 207
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ +TF +I+AC GK VHG+ +K G D +G A+I Y C D A+ +
Sbjct: 208 PDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVEL 267
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS---ISYNSMIK--------- 323
+D++ L + NSLI G G +A F L E+ +M+
Sbjct: 268 FDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEG 327
Query: 324 ----GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------ERNPVTWNSMIS 371
G ++G + E M ++I + + + E ++ V+WNSMI
Sbjct: 328 NVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIG 387
Query: 372 GYVQNNLHEKALQLY--MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
Y + + L M M + ++ T L AC L + LH + ++ F
Sbjct: 388 AYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSF 447
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ + + + Y++CGS+ A+ F +++ +V++W A++ G++ +G +A+ +
Sbjct: 448 QYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFE 507
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR-------SMKSYGVVPTLE-HYTCVV 541
M I+P+ + V +L AC R GL+ G +I M S+ V L ++ C
Sbjct: 508 MTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSK 567
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
GR+ + + M + ++V W A+LS
Sbjct: 568 PFYGRT--------YFERMG-DKNSVCWNAMLSG 592
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 137/285 (48%), Gaps = 23/285 (8%)
Query: 295 ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
+ +GR D L + + + +I Y++ G +S+ +F+++ ++++
Sbjct: 123 VEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQW----- 177
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACSCLGS 413
N+++SGYV+N L+++A+ ++ + + TF L AC+
Sbjct: 178 ------------NALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCD 225
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
+ G+ +H VK +++VG +++ +Y +CG +++A F + N+ +W +L+ G
Sbjct: 226 IHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRG 285
Query: 474 YSHHGLGSEAVLLFEIMLE--QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
+S +G EA F +LE ++P+ AT V +L C G V+ GM I G+V
Sbjct: 286 FSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLV 345
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV-WGALLSA 575
L ++D+ + G L EA + IE +VV W +++ A
Sbjct: 346 HELMVCNALIDMYSKCGCLSEAAILFR--KIENKSVVSWNSMIGA 388
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHL-VKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ + + +L C +++ G+ L L V + F + + T L+ MYS CG ++
Sbjct: 103 LAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLES 162
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVR 511
+ F + + N+ W AL++GY + L EA+ F E++ + P+ TF ++ AC
Sbjct: 163 RLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTG 222
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
++ G + G++ L ++ L G+ G L EA E MP E + + W +
Sbjct: 223 KCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP-EQNLISWNS 281
Query: 572 LL---SACWFWM 580
L+ S FW+
Sbjct: 282 LIRGFSENGFWL 293
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/464 (34%), Positives = 256/464 (55%), Gaps = 26/464 (5%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ T V+++ A L G+ +HG ++K G EFD + +L++ Y +++
Sbjct: 136 PDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQL 195
Query: 276 YDRLENPCLNAS------NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
+D E+P N + N LING +G + A +F + E N+ S+NS+I G+ G
Sbjct: 196 FD--ESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNG 253
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
+D ++ LF +MP E+N V+W +MI+G+ QN HEKAL ++ M
Sbjct: 254 DLDRARELFVQMP-----------------EKNVVSWTTMINGFSQNGDHEKALSMFWRM 296
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+ + T AC+ +G+LQ G+ +H +L F+ N +GT+LVDMY++CG+I
Sbjct: 297 LEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNI 356
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
A F ++ W+ ++ G++ HG +A+ F M I P+ F+ +L+AC
Sbjct: 357 KSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTAC 416
Query: 510 VRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
+G V++G+ F SM+ Y + PT++HYT +VDLLGR+G L EA FI+ MPI D V+
Sbjct: 417 SHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVI 476
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
WGAL AC N+E+ E A+K+ L+ K +YV LSN+YA +G+W +R + +
Sbjct: 477 WGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKN 536
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTAN 672
V+KDPG S+IE+ +VH+F D + I LE +TA+
Sbjct: 537 RGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITAS 580
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 170/377 (45%), Gaps = 61/377 (16%)
Query: 52 WNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL 111
+N ++ G ++ ++F+ S+S M R +++ + T +L A L + G+ +H V+
Sbjct: 106 FNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVM 165
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE----LLWSLMLVG-------- 159
K G E FV L+ Y E+ ++FDE + N+ LLW++++ G
Sbjct: 166 KLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLS 225
Query: 160 -----------------------YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+V+ + A ++F++MP+K+VV WT +I+G++++ D
Sbjct: 226 KAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGD 285
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
EKAL +F M E G PN+ T S + AC ++GA G+ +H L GF+ + IG
Sbjct: 286 H-EKALSMFWRMLEEGVR-PNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIG 343
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA--- 313
AL++ Y C A RV+ + L + +I G G + A F ++ A
Sbjct: 344 TALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGIN 403
Query: 314 -NSISYNSMIKGYAVYGQVDDSKRLFEK----------MPHRSII--------SLNTMIS 354
+ + + +++ + G VD FE M H ++I L+ +S
Sbjct: 404 PDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALS 463
Query: 355 VIPEMERNP--VTWNSM 369
I M NP V W ++
Sbjct: 464 FIQSMPINPDFVIWGAL 480
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 50/338 (14%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N I RNG L AR LF QMP + VVSW TM+ G+S+ +++LS+ M
Sbjct: 241 SWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEG 300
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V+ N+ T + L C ++ +L G++IH + +G++ +G+ L+ YA C I+ A
Sbjct: 301 VRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSAS 360
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC- 198
RVF E + L WS+M+ G+ ++ GC
Sbjct: 361 RVFVETKGKDLLTWSVMIWGW---------------------------------AIHGCF 387
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
++AL+ F M+ +G N P+E F +++ AC+ G V GL D SI
Sbjct: 388 DQALQCFVKMKSAGIN-PDEVIFLAILTACSH-----SGNVDQGLNFFESMRLDYSIEPT 441
Query: 259 LIEFYCGCEAFDGAMRVYDRLE-------NPCLNASNSLINGLISMGRIEDAELIFNRLT 311
+ + + A R+ + L NP +L + IE AEL +L
Sbjct: 442 MKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLL 501
Query: 312 E---ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
+ + SY + YA G+ +D +R+ M +R +
Sbjct: 502 QLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGV 539
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 14/183 (7%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
F L HA + L L Q +HA + SN V T L+ S++ A + F
Sbjct: 43 FIPLIHASNTLPQLHQ---IHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFD 99
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
PN+ + AL+ G + + +V F +ML I P+ T VL + A LV+ G+
Sbjct: 100 HPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSV--AALVDVGLG 157
Query: 521 IFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDA---VVWGALL 573
R + + LE + V VD+ + G L + + P A ++W L+
Sbjct: 158 --RCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLI 215
Query: 574 SAC 576
+ C
Sbjct: 216 NGC 218
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 174/554 (31%), Positives = 300/554 (54%), Gaps = 25/554 (4%)
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK--- 200
LH+D + L + Y N +S A +VF ++P +V ++ LI Y S+ G E
Sbjct: 49 HLHQDPYIAPKL-IASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAY--SLSGNESNSL 105
Query: 201 -ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE-GKVVHGLLIKCGFEFDESIGGA 258
A + M G + + +T+ +++ C ++ K+VH + K GF +D + +
Sbjct: 106 CAFGVLLKMHVDGV-LADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNS 164
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
LI+ YC C + AM+V+ +E + + NS++ GL+ G ++ A +F+ + E + +S+
Sbjct: 165 LIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSW 224
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI---SVIPEME-----------RNPV 364
N+M+ G+ G++D + +LFE+M R I+S +TM+ S +M+ +N V
Sbjct: 225 NTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLV 284
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
W ++ISGY + ++A+ L M K + F + AC+ G L G+ +H
Sbjct: 285 LWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSF 344
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS-PNVAAWTALMNGYSHHGLGSEA 483
+++ F + V S +DMY++CG ++DA F+ + + ++ +W ++++G+ HG G ++
Sbjct: 345 LRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKS 404
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVD 542
+ LF M+ + P+ TF+G+L AC AGLVNEG F SM+ YG+VP +EHY C+VD
Sbjct: 405 IELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGCMVD 464
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISA 602
LLGR GHL EA ++ MP E +A++ G LL AC ++++ ++ +F L
Sbjct: 465 LLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFKLVPSDPGN 524
Query: 603 YVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
+ +LSNIYA G W +RK++ +K G S IE+ VH F+V D ++P I
Sbjct: 525 FSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDWSHPKSGDI 584
Query: 663 YATLEHLTANLNSV 676
Y ++ L +L V
Sbjct: 585 YNMIDRLVHDLRQV 598
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 190/431 (44%), Gaps = 44/431 (10%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+++A + + Q+ I K I L +A N+F+Q+P V +N ++ YS
Sbjct: 40 QIHAQLIKCHLHQDPYIAP--KLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSL 97
Query: 62 WAKFDESL---SLVSTMHRSNVKLNETTFSTILSVCAQLNSLID-GKQIHCLVLKSGYEC 117
SL ++ MH V + T+ +L C +S + K +H V K G+
Sbjct: 98 SGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYW 157
Query: 118 FEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
FV + L+ Y C ++E A +VF + E + + W+ M+ G V+ + A VF +MP
Sbjct: 158 DIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMP 217
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
++D V W ++ G+ K+ + +KA KLF M E + ++ +++ ++ G
Sbjct: 218 ERDRVSWNTMLDGFTKAGE-MDKAFKLFERMAER-----DIVSWSTMVCGYSKNGDMDMA 271
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI------ 291
++ L +C + + + +I Y AM + D +E L +
Sbjct: 272 RM---LFDRCPVK-NLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAA 327
Query: 292 ---NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP-HRSII 347
+G++ +G+ + +R + + NS I YA G VDD+ R+F M + ++
Sbjct: 328 CAESGMLGLGKKMHDSFLRSRFRCSTKV-LNSFIDMYAKCGCVDDAFRVFNGMKTEKDLV 386
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
S N+M I G+ + EK+++L+ TM + R TF L A
Sbjct: 387 SWNSM-----------------IHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCA 429
Query: 408 CSCLGSLQQGQ 418
C+ G + +G+
Sbjct: 430 CTHAGLVNEGR 440
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 157/362 (43%), Gaps = 34/362 (9%)
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
K +H LIKC D I LI Y A+ V++++ +P ++ N LI
Sbjct: 39 KQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLS 98
Query: 298 GRIEDAELIFNRLTE-------ANSISYNSMIKG-----------YAVYGQVDDSKRLFE 339
G ++ F L + A++ +Y ++KG V+ V+ ++
Sbjct: 99 GNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWD 158
Query: 340 KMPHRSII-------SLNTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
S+I + + V M ER+ V+WNSM+ G V+N + AL+++ M
Sbjct: 159 IFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMP- 217
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+R R +++ + + G + + L + E ++ +++V YS+ G ++
Sbjct: 218 ---ERDRVSWNTMLDGFTKAGEMDKAFKLFERMA----ERDIVSWSTMVCGYSKNGDMDM 270
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A+ F N+ WT +++GY+ G EA+ L + M + + + F+ +L+AC
Sbjct: 271 ARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAE 330
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
+G++ G K+ S + + +D+ + G + +A M E D V W +
Sbjct: 331 SGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNS 390
Query: 572 LL 573
++
Sbjct: 391 MI 392
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 47/210 (22%)
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
H C+ ++Q +HA L+K + Y+ L+ YS +++ A F+ + PNV
Sbjct: 29 LHKCTNPNHIKQ---IHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNV 85
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLE---QDIVPNAATFVGVLSAC------------ 509
+ L+ YS G S ++ F ++L+ ++ + T+ +L C
Sbjct: 86 HLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKM 145
Query: 510 ------------------------VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
R G V MK+F M+ VV + +V L
Sbjct: 146 VHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVS----WNSMVGGLV 201
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++G L A + +MP E D V W +L
Sbjct: 202 KNGDLDGALKVFDEMP-ERDRVSWNTMLDG 230
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 181/573 (31%), Positives = 299/573 (52%), Gaps = 52/573 (9%)
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+ HR+ + + T++ + + A+ +L G+ +H ++ G + + L+ FY C
Sbjct: 18 STHRT-FQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECG 76
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++ A+++FD K+P ++ W L A+
Sbjct: 77 QLSNARKLFD-------------------------------KIPNTNIRRWIVLTGACAR 105
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
E+AL F M++ G PN++ S+++AC L G+ +H +++K FE D
Sbjct: 106 R-GFYEEALSAFSEMQKEGLR-PNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDA 163
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
I ALI Y C + A RV+D + + L N++++G G + +A + ++ +A
Sbjct: 164 YIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQA 223
Query: 314 ----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
N +S+N++I G++ QV D + E + L T V P++ V+W S+
Sbjct: 224 GVKPNVVSWNTLIAGFS---QVGDKSMVSE------VFRLMTANGVEPDV----VSWTSV 270
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
ISG+VQN + + + M + T S L AC+ + +L+ G+ +H + +
Sbjct: 271 ISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGV 330
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
E +VYV ++LVDMY++CG I++A+ F + N W +L+ GY++HG +EA+ LF
Sbjct: 331 EKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQ 390
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSG 548
M E D + TF VL+AC AG+V G +FR M+ Y + P LEHY C+VDLLGR+G
Sbjct: 391 MEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAG 450
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L EA + IK MP+E D VWGALL AC N+E+ E AA+ +F L+ + + ++LSN
Sbjct: 451 KLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSN 510
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
+YA G+WG ++K + + K PGCSWIE
Sbjct: 511 LYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 543
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 206/493 (41%), Gaps = 123/493 (24%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
TECG QL AR LFD++P + W + ++ ++E+LS S M + ++ N+
Sbjct: 73 TECG---QLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQF 129
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+IL C L+ G+ +H ++LK+ +E ++ S L++ Y+ C +E+A RVFD +
Sbjct: 130 VLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI 189
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEKA 201
+ + ++ + M+ GY Q + +A ++ KM K +VV W LI+G+++ D +
Sbjct: 190 VDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVS 249
Query: 202 LKLFRWMRESG----------------ENMPNEYTFD------------------SVIRA 227
++FR M +G +N N FD S++ A
Sbjct: 250 -EVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPA 308
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
C + GK +HG + G E D + AL++ Y C
Sbjct: 309 CTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKC--------------------- 347
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
G I +A+++F + E N++++NS+I GYA +G +++ LF +M S
Sbjct: 348 ----------GYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQM-EESDT 396
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
L+ + TF+ + +A
Sbjct: 397 KLDHL-----------------------------------------------TFTAVLNA 409
Query: 408 CSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVA 465
CS G ++ G+ L + K E + +VD+ R G +++A ++ P+
Sbjct: 410 CSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKF 469
Query: 466 AWTALMNGYSHHG 478
W AL+ +HG
Sbjct: 470 VWGALLGACRNHG 482
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 5/195 (2%)
Query: 385 LYMTMRKLAIDRT----RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+Y R ++ RT T++ + +L +G+ LHAHLV Y L+
Sbjct: 10 VYRVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLM 69
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
Y+ CG +++A+ F I + N+ W L + G EA+ F M ++ + PN
Sbjct: 70 SFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQF 129
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
+L AC G + + + ++ + + GH+ +A + D
Sbjct: 130 VLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACR-VFDW 188
Query: 561 PIELDAVVWGALLSA 575
++ D VV A++S
Sbjct: 189 IVDKDLVVMNAMVSG 203
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/499 (32%), Positives = 264/499 (52%), Gaps = 53/499 (10%)
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+L++ Y + L+ D +F + P++D+ +++ L++ + S + E L L R M +
Sbjct: 42 ALLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHS-ESPELVLPLLRRMLSADA 100
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+ + S+ A ARL + C GK +HG + + D+ + +LI+ YC C
Sbjct: 101 LRPDHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKC------- 153
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
G +DA +F+ + NS+ + ++I GY + G+ D+
Sbjct: 154 ------------------------GVPDDARKVFDSIVAKNSVMWTALISGYVLNGRSDE 189
Query: 334 SKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK-- 391
+ LF MP R++ + W ++ISG+V++ A++L++ MR+
Sbjct: 190 ALELFRSMPGRTLFA-----------------WTALISGFVRSGESVSAVKLFVDMRRDG 232
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
++ID S + A L + G+ LH+ ++ F S++ VG ++VDMYS+C I+
Sbjct: 233 VSIDDAFVLSSAIGGAAD-LAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHS 291
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A+ F I+ ++ +WT ++ G + HG EA L++ M+ + PN TFVG++ AC
Sbjct: 292 AREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSH 351
Query: 512 AGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
AGLV +G ++F SMK YG+ P L+HYTC +DLL RSGHL EAEE I MP D W
Sbjct: 352 AGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWA 411
Query: 571 ALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630
+LLSAC + N E+ R A + L K S YV+LSN+YAV GKW +RK + +E
Sbjct: 412 SLLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADME 471
Query: 631 VKKDPGCSWIELNSRVHAF 649
++K+PG SWIE+ F
Sbjct: 472 IRKEPGYSWIEVGREFRLF 490
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 162/322 (50%), Gaps = 6/322 (1%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-VKLN 83
++ ++ L R LFD+ P R + ++++L S + L L+ M ++ ++ +
Sbjct: 45 VSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALRPD 104
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
++I S A+L SL GKQ+H + S Y + V S L+ Y C ++A++VFD
Sbjct: 105 HFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFD 164
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ N ++W+ ++ GYV +A ++F MP + + WT LISG+ +S + A+K
Sbjct: 165 SIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESV-SAVK 223
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
LF MR G ++ + + S I A L A G+ +H L ++ GF +G A+++ Y
Sbjct: 224 LFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMY 283
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYN 319
C A V++ + + + +++ G GR E+A +++R+ A N +++
Sbjct: 284 SKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFV 343
Query: 320 SMIKGYAVYGQVDDSKRLFEKM 341
+I + G V ++LF+ M
Sbjct: 344 GLIYACSHAGLVQKGRQLFDSM 365
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 19/259 (7%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET-TFST 89
NG+ A LF MP RT+ +W ++ G+ + + ++ L M R V +++ S+
Sbjct: 184 NGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDDAFVLSS 243
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+ A L + + G+Q+H L ++ G+ VG+ ++ Y+ C +I A+ VF+E+ +
Sbjct: 244 AIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGRD 303
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGYAKSVDG-CEKALKL 204
+ W+ MLVG Q +AF ++ +M K + V + LI YA S G +K +L
Sbjct: 304 IISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLI--YACSHAGLVQKGRQL 361
Query: 205 FRWMR-ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
F M+ E G N P + + +R G E + L+ + DE+ +L+
Sbjct: 362 FDSMKGEYGIN-PRLQHYTCYLDLLSRSGHLAEAE---ELITTMPYVPDEATWASLLS-- 415
Query: 264 CGCEAFDGA---MRVYDRL 279
C+ ++ A +RV D L
Sbjct: 416 -ACKKYNNAEMSIRVADNL 433
>gi|357518009|ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523315|gb|AET03769.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 672
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 194/629 (30%), Positives = 307/629 (48%), Gaps = 58/629 (9%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS- 78
S N ++ ++G L A+ LF+ MP++ + WN+M+ GYS+ SL L M+
Sbjct: 94 SWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLDP 153
Query: 79 --NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE---FVGSGLLFFYANCF 133
V + ST+ CA L +L GKQ+H V G+E FE + S ++ FY C
Sbjct: 154 LETVHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFE-FEQDKVLCSSIVNFYGKCG 212
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+++ A RV + E ++ S ++ GY MSDA VF V+W +ISGY
Sbjct: 213 DLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVS 272
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ + E AL LF MR +G + +++ + L K +H K G D
Sbjct: 273 NGEEME-ALALFNKMRRNGV-WGDFSAVANILSISSSLLNVELVKQMHDHAFKIGATHDI 330
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
+ L++ Y C+ +P D+ +F+ L
Sbjct: 331 VVASTLLDAYSKCQ-------------HP------------------HDSCKLFHELKVY 359
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
++I N+MI Y G+V+D+K +F MP++++IS WNS++ G
Sbjct: 360 DAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLIS-----------------WNSILVGL 402
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
QN +AL + M KL + + +F+ + AC+ SL+ G+ L + ES+
Sbjct: 403 TQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQ 462
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+ TSLVD Y +CG + + F + + +W ++ GY+ +G G EA+ LF M
Sbjct: 463 IICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYS 522
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ P+A TF G+LSAC GLV EG +FR+MK Y + P +EHY+C+VDL R G E
Sbjct: 523 GVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGE 582
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A I++MP + DA +W ++L C N +G+ AA+K+ LD AY+ LSNI A
Sbjct: 583 AMYLIEEMPFQADANMWLSVLRGCVSHGNKTIGKMAAEKIIQLDPGNSGAYIQLSNILAT 642
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
W ++R+ + + V+K PGCSW++
Sbjct: 643 SEDWEGSAEVRELMRNKNVQKIPGCSWMD 671
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 117/518 (22%), Positives = 226/518 (43%), Gaps = 58/518 (11%)
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG-LLFFYANCFEIEEAKRVFDELHEDNE 150
SVC ++ + +Q+H +LK+G + + LL Y+ + +A ++FDE+ + N
Sbjct: 5 SVC---RTIREARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNP 61
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR- 209
W+ ++ ++ + + ++F MP K W ++S +KS D ++A LF M
Sbjct: 62 FSWNTLIEAHINLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGD-LQQAQALFNAMPM 120
Query: 210 ------------ESGENMP--------------------NEYTFDSVIRACARLGAFCEG 237
S P + + +V ACA L A G
Sbjct: 121 KNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDCG 180
Query: 238 KVVHGLLIKCGFEF--DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI 295
K VH + GFEF D+ + +++ FY C D A RV ++ + ++L++G
Sbjct: 181 KQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYA 240
Query: 296 SMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
+ GR+ DA +F+ + S+ +NS+I GY G+ ++ LF KM + + ++
Sbjct: 241 NAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVAN 300
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
I + +S+++ + +H+ A ++ T + +S H
Sbjct: 301 ILSIS------SSLLNVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFH 354
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+ ++ A L+ T ++ +Y CG + DA+ F+S+ + + +W +++ G +
Sbjct: 355 ELKVYDAILLNT-----------MITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLT 403
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
+ SEA+ F +M + D+ + +F V+SAC + G ++F + G+
Sbjct: 404 QNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQI 463
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
T +VD + G L E + D I+ D V W +L
Sbjct: 464 ICTSLVDFYCKCG-LVEMGRKVFDGMIKTDEVSWNTML 500
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 413 SLQQGQLLHAHLVKTP-FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
++++ + LH L+KT S+V L+ +YSR GS++DA F + PN +W L+
Sbjct: 9 TIREARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFSWNTLI 68
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
+ + G ++++ LF M + ++ ++S ++G + + +F +M
Sbjct: 69 EAHINLGHRNKSLELFHAMPHK----THYSWNLIVSTLSKSGDLQQAQALFNAMPMKN-- 122
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDM---PIEL---DAVVWGALLSACWFWMNMEVG 585
P + + ++ R G+ + K+M P+E DA V + AC ++ G
Sbjct: 123 PLV--WNSMIHGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDCG 180
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
++ ++F + V+ S+I GK G
Sbjct: 181 KQVHARVFIDGFEFEQDKVLCSSIVNFYGKCG 212
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/437 (35%), Positives = 240/437 (54%), Gaps = 18/437 (4%)
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
+H +L + G + + L Y D ++ ++ R +NP + ++I+G G
Sbjct: 49 IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGD 108
Query: 300 IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
+ A+ +F+ + E + +S +M+ YA +G++D ++ LF+ M
Sbjct: 109 VVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGME----------------- 151
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
ER+ V WN MI GY QN + +AL L+ M K T + AC LG+L+ G+
Sbjct: 152 ERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRW 211
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+H+++ + NV+VGT+LVDMYS+CGS+ DA+ F I +V AW +++ GY+ HG
Sbjct: 212 VHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGF 271
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYT 538
EA+ LF+ M + P TF+G+LSAC +G V EG IF MK YG+ P +EHY
Sbjct: 272 SQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYG 331
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
C+V+LLGR+GH+ +A E +K+M IE D V+WG LL AC + +GE+ + + +
Sbjct: 332 CMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLA 391
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
Y++LSNIYA +G W +R + VKK+PGCS IE+N++VH F N+P
Sbjct: 392 NSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPK 451
Query: 659 CNVIYATLEHLTANLNS 675
IY LE + L S
Sbjct: 452 RKEIYMMLEEINGWLKS 468
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 155/341 (45%), Gaps = 66/341 (19%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS +T ++G+L AR LFD M R V WN M+ GY++ +E+L L
Sbjct: 121 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 180
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++ K NE T ++LS C QL +L G+ +H + +G + VG+ L+ Y+ C
Sbjct: 181 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 240
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+E+A+ VFD++ + + + W+ M+VGY + G++
Sbjct: 241 LEDARLVFDKIDDKDVVAWNSMIVGYA--------------------------MHGFS-- 272
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDE 253
++AL+LF+ M G + P TF ++ AC G EG + + + + G E
Sbjct: 273 ----QEALQLFKSMCRMGLH-PTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIE--- 324
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTE 312
IE Y GC ++N L G +E A EL+ N E
Sbjct: 325 ----PKIEHY-GC-----------------------MVNLLGRAGHVEQAYELVKNMNIE 356
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+ + + +++ ++G++ +++ E + +++ + T I
Sbjct: 357 PDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYI 397
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 143/304 (47%), Gaps = 23/304 (7%)
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
F + ++ +A ++ A+++FD + E + + + ML Y + + A +F M ++
Sbjct: 94 FFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEER 153
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
D V W +I GY ++ E AL LFR M ++ + PNE T SV+ AC +LGA G+
Sbjct: 154 DGVCWNVMIDGYTQNGMPNE-ALVLFRRMLKA-KAKPNEVTVLSVLSACGQLGALESGRW 211
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
VH + G +F+ +G AL++ Y C + + A V+D++++ + A NS+I G G
Sbjct: 212 VHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGF 271
Query: 300 IEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
++A +F + +I++ ++ G V + +F KM I
Sbjct: 272 SQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIE------- 324
Query: 356 IPEMERNPVTWNSM-ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414
P++E N + +G+V+ Q Y ++ + I+ + L AC G +
Sbjct: 325 -PKIEHYGCMVNLLGRAGHVE--------QAYELVKNMNIEPDPVLWGTLLGACRLHGKI 375
Query: 415 QQGQ 418
G+
Sbjct: 376 ALGE 379
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 194/681 (28%), Positives = 327/681 (48%), Gaps = 93/681 (13%)
Query: 38 RNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQL 97
R +FD M R VV+WNTM+ Y K + E+ + TM R ++ +F + ++
Sbjct: 172 RRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRM 231
Query: 98 NSLIDGKQIHCLVLKSGYECFE--FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+ + ++ LV+K G + + FV S +F YA ++ A+ +FD
Sbjct: 232 SDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFD------------ 279
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGEN 214
C L +++ VW +I GY + + C +A+ LF + ES +
Sbjct: 280 -------CCL------------ERNTEVWNTMIGGYVQ--NNCPIEAIDLFVQVMESEQF 318
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
+ ++ TF S + A ++L G+ +H ++K I A+I Y C + + +
Sbjct: 319 VLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFK 378
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDA-ELIFN-----------RLTEANSISYN--- 319
V+ + + N++++ + G ++ L+F LT S++ N
Sbjct: 379 VFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRS 438
Query: 320 -----------------------SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+I YA G + +++LFEK
Sbjct: 439 QEIGKQAHAYLIRHGIQFEGMDSYLIDMYAKSGLITTAQQLFEKNS-------------- 484
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
+ +R+ TWN+MI+GY QN L E+ ++ M + + T + + AC+ +G++
Sbjct: 485 -DYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGL 543
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +H ++ NV+VGT+L+DMYS+ G+I A+ F+ N +T +++ Y
Sbjct: 544 GKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQ 603
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLE 535
HG+G A+ LF ML I P++ TFV +LSAC AGLV+EG++IF+SM + Y + P+ E
Sbjct: 604 HGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAE 663
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV-VWGALLSACWFWMNMEVGERAAQKMFG 594
HY CV D+LGR G + EA EF+K + E + +WG+LL AC E+G+ A K+
Sbjct: 664 HYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLE 723
Query: 595 LDK-KPISAY-VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
++K ++ Y V+LSNIYA G W +RK + + K+ GCSW+E+ V+ F
Sbjct: 724 MEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSR 783
Query: 653 DRNNPNCNVIYATLEHLTANL 673
D +P C IY LE L +
Sbjct: 784 DHKHPQCAEIYQMLEKLAMEM 804
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 168/606 (27%), Positives = 277/606 (45%), Gaps = 62/606 (10%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNETTFS 88
R G A +LFD +P T V WNT++ G+ ++L + M S + K + TFS
Sbjct: 49 RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF-EIEEAKRVFDELHE 147
+ L CAQ SL GK +HC VL+S + V + LL Y+ C E+ +D
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYD---- 164
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
+ C+L+ FD M K++VV W +IS Y K+ E A K+FR
Sbjct: 165 ------------FNNCDLVRRVFDT---MRKRNVVAWNTMISWYVKTERLIE-AFKMFRT 208
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF--DESIGGALIEFYCG 265
M G P +F +V A R+ + V++GL++K G +F D + + I Y
Sbjct: 209 MMRMGIR-PTPVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAE 267
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLIS-----------MGRIEDAELIFNRLTEAN 314
D A ++D N++I G + + +E + + + +T +
Sbjct: 268 LGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLS 327
Query: 315 SISYNSMIK----GYAVYGQVDDSKRLFEKMPHRSII-------SLNTMISVIPEM-ERN 362
+++ S ++ G ++ + S + + + +II S+ T V M ER+
Sbjct: 328 ALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERD 387
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
VTWN+M+S +VQN L ++ L L M+K T + L S L S + G+ HA
Sbjct: 388 VVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHA 447
Query: 423 HLVK--TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS--SPNVAAWTALMNGYSHHG 478
+L++ FE + + L+DMY++ G I AQ F S + A W A++ GY+ +G
Sbjct: 448 YLIRHGIQFEG---MDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNG 504
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
L E +F M+EQ++ PNA T +L AC G + G +I + + T
Sbjct: 505 LSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGT 564
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA---QKMFGL 595
++D+ +SG + AE + +E ++V + ++S+ + +GERA M G
Sbjct: 565 ALLDMYSKSGAITYAENVFAE-TLEKNSVTYTTMISS---YGQHGMGERALSLFHAMLGS 620
Query: 596 DKKPIS 601
KP S
Sbjct: 621 GIKPDS 626
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 163/390 (41%), Gaps = 84/390 (21%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
Y +S T++ +V N I R G + T+ +F M R VV+WNTM+ + +
Sbjct: 347 YILKSSTILQ----VVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNG 402
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS 123
DE L LV M + ++ T + +LS+ + L S GKQ H +++ G + FE + S
Sbjct: 403 LDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQ-FEGMDS 461
Query: 124 GLLFFYANCFEIEEAKRVFDE--LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
L+ YA I A+++F++ ++ +E W+ M+ GY Q L + F VF KM +++V
Sbjct: 462 YLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNV 521
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
PN T S++ AC +G GK +H
Sbjct: 522 ---------------------------------RPNAVTLASILPACNPMGTIGLGKQIH 548
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
G I+C + +G AL++ Y G I
Sbjct: 549 GFAIRCFLNRNVFVGTALLDMYS-------------------------------KSGAIT 577
Query: 302 DAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
AE +F E NS++Y +MI Y +G + + LF M I +
Sbjct: 578 YAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGI-------------KP 624
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
+ VT+ +++S L ++ L+++ +M +
Sbjct: 625 DSVTFVAILSACSYAGLVDEGLRIFQSMER 654
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 160/385 (41%), Gaps = 67/385 (17%)
Query: 29 GRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
++G + TA+ LF++ R +WN M+ GY++ +E ++ M NV+ N T
Sbjct: 468 AKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVT 527
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
++IL C + ++ GKQIH ++ FVG+ LL Y+ I A+ VF E
Sbjct: 528 LASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETL 587
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISG--YAKSVDGCEK 200
E N + ++ M+ Y Q + A +F M K D V + ++S YA VD +
Sbjct: 588 EKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVD---E 644
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
L++F+ M + P+ + V R+G E +EF + +G
Sbjct: 645 GLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVE-----------AYEFVKGLGE--- 690
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS--- 317
E SL+ G E +++ N+L E S
Sbjct: 691 -------------------EGNTFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGSSLT 731
Query: 318 -YNSMIKG-YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV- 374
Y+ ++ YA G D+ R+ ++M + + M+ +W ++G+V
Sbjct: 732 GYHVLLSNIYAAEGNWDNVDRVRKEMRQKGL------------MKEAGCSWVE-VAGHVN 778
Query: 375 ----QNNLHEKALQLYMTMRKLAID 395
+++ H + ++Y + KLA++
Sbjct: 779 CFMSRDHKHPQCAEIYQMLEKLAME 803
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 186/638 (29%), Positives = 305/638 (47%), Gaps = 91/638 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G A +F+ + ++ +N M+ + K F ++SL + V + T+ +L
Sbjct: 56 GDFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVL 115
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ + +G+++H V+K+G E +V + + YA +E +VF+E
Sbjct: 116 KGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEE------- 168
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
MP +D V W +ISGY + E+A+ ++R M
Sbjct: 169 ------------------------MPDRDAVSWNIMISGYVR-CKRFEEAVDVYRRMWTE 203
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
PNE T S + ACA L GK +H I + +G AL++ YC C
Sbjct: 204 SNEKPNEATVVSTLSACAVLRNLELGKEIHDY-IASELDLTTIMGNALLDMYCKC----- 257
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
G + A IF+ +T N + SM+ GY + GQ+
Sbjct: 258 --------------------------GHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQL 291
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
D ++ LFE+ P R I V W +MI+GYVQ N E+ + L+ M+
Sbjct: 292 DQARNLFERSPSRDI-----------------VLWTAMINGYVQFNRFEETIALFGEMQI 334
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+ + L C+ G+L+QG+ +H ++ + + + VGT+L++MY++CG I
Sbjct: 335 RGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEK 394
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
+ F+ + + +WT+++ G + +G SEA+ LF+ M + P+ TFV VLSAC
Sbjct: 395 SFEIFNGLKEKDTTSWTSIICGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSACSH 454
Query: 512 AGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV-- 568
AGLV EG K+F SM S Y + P LEHY C +DLLGR+G L EAEE +K +P + + ++
Sbjct: 455 AGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVP 514
Query: 569 -WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
+GALLSAC + N+++GER A + + S + +L++IYA +W +R ++
Sbjct: 515 LYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRNKMK 574
Query: 628 HLEVKKDPGCSWIELNSRVH------AFSVEDRNNPNC 659
L +KK PG S IE++ + F D+N +C
Sbjct: 575 DLGIKKVPGYSAIEVDGKWQQRLSEGPFPFPDKNWSSC 612
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 10/182 (5%)
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV--DMYSRCGSINDAQAS 455
+ T+ L +C + L+Q + AH+ + + L+ M S G N A
Sbjct: 8 KGTYISLLKSCKSMSQLKQ---IQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRI 64
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F+ I P++ + ++ + G A+ LF+ + E + P+ T+ VL G V
Sbjct: 65 FNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEV 124
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTC--VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
EG K+ + G+ + Y C +D+ G + + ++MP + DAV W ++
Sbjct: 125 REGEKVHAFVVKTGL--EFDPYVCNSFMDMYAELGLVEGFTQVFEEMP-DRDAVSWNIMI 181
Query: 574 SA 575
S
Sbjct: 182 SG 183
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 270/496 (54%), Gaps = 19/496 (3%)
Query: 200 KALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+ LFR +R P+ YTF ++++ CA A EG ++HG+++K G FD + A
Sbjct: 106 QPFTLFRDLRRQAPPFTPDGYTFTALVKGCATRVATGEGTLLHGMVLKNGVCFDLYVATA 165
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
L++ Y A +V+D + + ++I G G + +A +F+ + + + +++
Sbjct: 166 LVDMYVKFGVLGSARKVFDEMSVRSKVSWTAVIVGYARCGDMSEARRLFDEMEDRDIVAF 225
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS----------------VIPEMERN 362
N+MI GY G V ++ LF +M R+++S +M+S ++PE +N
Sbjct: 226 NAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSGYCGNGDVENAKLMFDLMPE--KN 283
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
TWN+MI GY QN AL+L+ M+ +++ T + A + LG+L G+ +H
Sbjct: 284 VFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVCVLPAVADLGALDLGRWIHR 343
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
++ + + +GT+L+DMY++CG I A+ +F ++ A+W AL+NG++ +G E
Sbjct: 344 FALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTERETASWNALINGFAVNGCAKE 403
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
A+ +F M+E+ PN T +GVLSAC GLV EG + F +M+ +G+ P +EHY C+VD
Sbjct: 404 ALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRRWFNAMERFGIAPQVEHYGCMVD 463
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISA 602
LLGR+G L EAE I+ MP + + ++ + L AC ++ ++ ER +++ +D+
Sbjct: 464 LLGRAGCLDEAENLIQTMPYDANGIILSSFLFACGYFNDVLRAERVLKEVVKMDEDVAGN 523
Query: 603 YVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
YV+L N+YA +W D+++ + K+ CS IE+ F+ D + + VI
Sbjct: 524 YVMLRNLYATRQRWTDVEDVKQMMKKRGTSKEVACSVIEIGGSFIEFAAGDYLHSHLEVI 583
Query: 663 YATLEHLTANLNSVVL 678
TL L+ ++ ++
Sbjct: 584 QLTLGQLSKHMKVEII 599
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 212/481 (44%), Gaps = 52/481 (10%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET--TFSTILSVC 94
AR F+ R N+M+ + +F + +L + R TF+ ++ C
Sbjct: 76 ARRFFNATHTRDTFLCNSMIAAHFAARQFSQPFTLFRDLRRQAPPFTPDGYTFTALVKGC 135
Query: 95 AQLNSLIDGKQIHCLVLKSGYECFE-FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
A + +G +H +VLK+G CF+ +V + L+ Y + A++VFDE+ +++ W
Sbjct: 136 ATRVATGEGTLLHGMVLKNGV-CFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSW 194
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESG 212
+ ++VGY +C MS+A +F +M +D+V + +I GY K GC A +LF MRE
Sbjct: 195 TAVIVGYARCGDMSEARRLFDEMEDRDIVAFNAMIDGYVKM--GCVGLARELFNEMRER- 251
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI-KCGFEFDESIGGALIEFYCGCEAFDG 271
N ++ S++ G K++ L+ K F ++ IGG YC
Sbjct: 252 ----NVVSWTSMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAMIGG-----YCQNRRSHD 302
Query: 272 AMRVYDRLENPCLNASNSLIN---------GLISMGRIEDAELIFNRLTEANSISYNSMI 322
A+ ++ ++ + + + G + +GR + +L + I ++I
Sbjct: 303 ALELFREMQTASVEPNEVTVVCVLPAVADLGALDLGRWIHRFALRKKLDRSARIG-TALI 361
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
YA G++ +K FE M ER +WN++I+G+ N ++A
Sbjct: 362 DMYAKCGEITKAKLAFEGMT-----------------ERETASWNALINGFAVNGCAKEA 404
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L+++ M + T + AC+ G +++G+ + + V +VD+
Sbjct: 405 LEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRRWFNAMERFGIAPQVEHYGCMVDL 464
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMN-----GYSHHGLGSEAVLLFEIMLEQDIVP 497
R G +++A+ ++ P A L + GY + L +E VL + +++D+
Sbjct: 465 LGRAGCLDEAENLIQTM--PYDANGIILSSFLFACGYFNDVLRAERVLKEVVKMDEDVAG 522
Query: 498 N 498
N
Sbjct: 523 N 523
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 171/422 (40%), Gaps = 95/422 (22%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L +AR +FD+M +R+ VSW ++ GY++ E+ L M ++
Sbjct: 174 GVLGSARKVFDEMSVRSKVSWTAVIVGYARCGDMSEARRLFDEMEDRDI----------- 222
Query: 92 SVCAQLNSLIDGK-QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
N++IDG ++ C+ L A+ +F+E+ E N
Sbjct: 223 ---VAFNAMIDGYVKMGCVGL--------------------------ARELFNEMRERNV 253
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W+ M+ GY + +A +F MP+K+V W +I GY ++ AL+LFR M +
Sbjct: 254 VSWTSMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRS-HDALELFREM-Q 311
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+ PNE T V+ A A LGA G+ +H ++ + IG ALI+ Y C
Sbjct: 312 TASVEPNEVTVVCVLPAVADLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAKC---- 367
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
G I A+L F +TE + S+N++I G+AV G
Sbjct: 368 ---------------------------GEITKAKLAFEGMTERETASWNALINGFAVNGC 400
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
++ +F +M N VT ++S L E+ + + M
Sbjct: 401 AKEALEVFARMIEEGFGP-------------NEVTMIGVLSACNHCGLVEEGRRWFNAME 447
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSI 449
+ I + + G L + + +L++T P+++N G L CG
Sbjct: 448 RFGIAPQVEHYGCMVDLLGRAGCLDEAE----NLIQTMPYDAN---GIILSSFLFACGYF 500
Query: 450 ND 451
ND
Sbjct: 501 ND 502
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 36/228 (15%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M + ++ T+ CG NG + A+ +FD MP + V +WN M+ GY + + ++L L
Sbjct: 248 MRERNVVSWTSMVSGYCG-NGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALEL 306
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M ++V+ NE T +L A L +L G+ IH L+ + +G+ L+ YA
Sbjct: 307 FREMQTASVEPNEVTVVCVLPAVADLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAK 366
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
C EI +AK F+ + E W+ ++ G+
Sbjct: 367 CGEITKAKLAFEGMTERETASWNALINGF------------------------------- 395
Query: 192 AKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+V+GC K AL++F M E G PNE T V+ AC G EG+
Sbjct: 396 --AVNGCAKEALEVFARMIEEGFG-PNEVTMIGVLSACNHCGLVEEGR 440
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 190/687 (27%), Positives = 352/687 (51%), Gaps = 63/687 (9%)
Query: 4 YATQSQTLMTQETLIVSTNKAITE--CG--RNGQLVTARNLFDQMPIRTVVSWNTMLCGY 59
+ ++Q+ + + L + IT CG +G + A ++F++M WN ++ GY
Sbjct: 40 FIKRAQSKTSFKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGY 99
Query: 60 SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
+ F E++ M ++ + TF ++ C +L +L+ G+++H ++K G++
Sbjct: 100 TNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDV 159
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
+V + L+ Y IE A++VFDE MP +
Sbjct: 160 YVCNFLIDMYLKIGFIELAEKVFDE-------------------------------MPVR 188
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
D+V W ++SGY DG +L F+ M G N + + S + AC+ G
Sbjct: 189 DLVSWNSMVSGYQIDGDGLS-SLMCFKEMLRLG-NKADRFGMISALGACSIEHCLRSGME 246
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
+H +I+ E D + +LI+ Y C D A RV++R+ + + A N++I G+
Sbjct: 247 IHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQ---- 302
Query: 300 IEDAELIFNRLTEANSI----SYNSMIKGYAVYGQVDDSKRLFEKMPHRSI-ISLNTMIS 354
ED ++I + +T N + ++++G +++G +++F +P+ + +L M
Sbjct: 303 -EDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFA--IRKMF--LPYLVLETALVDMYG 357
Query: 355 VIPEM-----------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
E+ E+N V+WN+M++ YVQN +++AL+++ + + T +
Sbjct: 358 KCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIAS 417
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
+ A + L S +G+ +H++++K SN ++ ++V MY++CG + A+ F + +
Sbjct: 418 VLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKD 477
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
V +W ++ Y+ HG G ++ F M + PN +TFV +L+AC +GL++EG F
Sbjct: 478 VVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFN 537
Query: 524 SMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
SMK YG+ P +EHY C++DLLGR+G+L EA+ FI++MP+ A +WG+LL+A ++
Sbjct: 538 SMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDV 597
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
+ E AA+ + L YV+LSN+YA G+W I+ + + K GCS +++
Sbjct: 598 VLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDI 657
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHL 669
N R +F +DR++ + N+IY L+ L
Sbjct: 658 NGRSESFINQDRSHAHTNLIYDVLDIL 684
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 191/644 (29%), Positives = 308/644 (47%), Gaps = 82/644 (12%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
G + AR LFD++P +N+++ Y E+L L+ M R + NE T +
Sbjct: 57 GGGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFL 116
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L CA++ + H +V+K G+ FVG+ LL YA+ + +++R FDE
Sbjct: 117 LKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDE------ 170
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
M ++VV W +I+GYA++ + +A LF MR
Sbjct: 171 -------------------------MVDRNVVSWNSMINGYAQAGN-TREACSLFEGMRR 204
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G + +E+T S++ AC+ G GK+VH L+ G D + AL++ Y C
Sbjct: 205 QGL-LADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKC---- 259
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
G + A F+ + N++S+ SM+ A
Sbjct: 260 ---------------------------GDLLMAHTCFDMMPFKNAVSWTSMLCALAKRAS 292
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+D ++ FE++P +SIIS WN+MIS YVQ +AL LY M+
Sbjct: 293 IDAARDWFEQIPEKSIIS-----------------WNAMISCYVQGGRFHEALDLYNRMK 335
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
L + T + + AC LG L G+++H + V + SL+DMY+RCG ++
Sbjct: 336 LLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVD 395
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A + FS + S NV +W A++ + HG +A++ F M+ P+ TFV +LSAC
Sbjct: 396 TAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACN 455
Query: 511 RAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
GL+ G F++M+ Y V P +EHY C+VDLLGR G L +A + IKDMP+ D VVW
Sbjct: 456 HGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVW 515
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
GALL AC ++++G++ +++ L+ +V++SN+ +W +RK +
Sbjct: 516 GALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREW 575
Query: 630 EVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+KK+ G S IE NS +H E + + + +Y + L +L
Sbjct: 576 GMKKNMGVSSIETNSNIHESGAEGIGHESSDDMYVGDDRLPHHL 619
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 33/220 (15%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS + + + AR+ F+Q+P ++++SWN M+ Y + +F E+L L + M
Sbjct: 278 VSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLL 337
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ +E T + +LS C QL L GK IH + + + + + LL YA C +++ A
Sbjct: 338 GLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTA 397
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+F E MP K+V+ W +I A
Sbjct: 398 ISLFSE-------------------------------MPSKNVISWNAIIGALAMH-GRA 425
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+ AL FR M P+E TF +++ AC G G+
Sbjct: 426 QDALMFFRSMVFDAFP-PDEITFVALLSACNHGGLLEAGQ 464
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY---SRCGSINDAQASFSSISSPNVAAWT 468
GS+ + LHAHLV + V + ++ Y G + A+ F I P+ +
Sbjct: 23 GSVHRLNQLHAHLVVHGVDD---VTSQILASYCALPAGGGVWYARQLFDRIPDPDRFVYN 79
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
+L+ Y + EA+ L M+ + I+PN T +L AC R M +
Sbjct: 80 SLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKL 139
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G V + ++ +G L ++ F +M ++ + V W ++++
Sbjct: 140 GFVGQVFVGNALLHSYASAGSLGDSRRFFDEM-VDRNVVSWNSMING 185
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 192/662 (29%), Positives = 329/662 (49%), Gaps = 59/662 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++G+L A +LFD+MP + VV+W T + G ++ + + + ++ + M S V N+ +
Sbjct: 54 KSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNA 113
Query: 90 ILSVCAQLNSLID--GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
L+ CA + G+Q+H L +++G+ ++GS L+ Y+ C
Sbjct: 114 ALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGS------------- 160
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
+W+ A +VF +M DVV +T L+S ++ D L +
Sbjct: 161 ----MWA--------------AEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQM 202
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
MR+ + PNE+T S++ C R+ G+ +HG ++K ALI+FY
Sbjct: 203 MRQGLQ--PNEHTMTSMLAECPRM----IGEQIHGYMLKVMGSQSVYASTALIDFYSRYG 256
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYN---- 319
FD A V++ L++ + + S++ I GR+EDA +F+ + E N +++
Sbjct: 257 DFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALG 316
Query: 320 ---SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME------RNP--VTWNS 368
S+ G ++ + + +++S+ + E+E NP V+W +
Sbjct: 317 ACGSVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTA 376
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
IS QN EKA+ L + M FS +C+ L L QG+ LH +K
Sbjct: 377 AISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLG 436
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
+ V G +L++MYS+CG I A+ +F ++ +V +W +L++G + HG + + F
Sbjct: 437 CDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFS 496
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRS 547
M P+ +TF+ VL C AGLV EG FR M YG+ PT HY C++D+LGR+
Sbjct: 497 EMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRN 556
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G EA IK+MP E D ++W LL++C N+++G+ A K+ L ++ ++YV++S
Sbjct: 557 GRFDEALHMIKNMPFEPDVLIWKTLLASCKLHKNLDIGKLATDKLMELSERDSASYVLMS 616
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
N+YA+ +W +R+R+ + VKKD G SWIE+ + V F D ++ + IY L
Sbjct: 617 NLYAMHEEWQDAERVRRRMDEIGVKKDAGWSWIEVKNEVSTFVARDTSHSDSASIYQMLA 676
Query: 668 HL 669
L
Sbjct: 677 EL 678
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 142/334 (42%), Gaps = 44/334 (13%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
T I +N ++ GR+G + + ++ +VSW + + +++++L+ M
Sbjct: 338 TDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQM 397
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
H N+ FS+ LS CA L L G+Q+HCL LK G + G+ L+ Y+ C +I
Sbjct: 398 HSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQI 457
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A+ FD + NL DV+ W LI G A+
Sbjct: 458 GSARLAFDVM------------------NL-------------HDVMSWNSLIHGLAQH- 485
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI-KCGFEFDES 254
L+ F M SG P++ TF +V+ C G EG+ L+ + G S
Sbjct: 486 GAANLVLEAFSEMCSSGWQ-PDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPS 544
Query: 255 IGGALIEFYCGCEAFDGAMRVY-------DRLENPCLNASNSLINGLISMGRIEDAELIF 307
+I+ FD A+ + D L L AS L L +G++ +L+
Sbjct: 545 HYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKLHKNL-DIGKLATDKLM- 602
Query: 308 NRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
L+E +S SY M YA++ + D++R+ +M
Sbjct: 603 -ELSERDSASYVLMSNLYAMHEEWQDAERVRRRM 635
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
P +V + +D + G ++DA F + NV AWT ++G + +G A +
Sbjct: 36 APPPPDVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAM 95
Query: 487 FEIMLEQDIVPN--AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
F MLE + N A A AG ++ G ++ G +C+++L
Sbjct: 96 FADMLESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELY 155
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
R G + AEE + M D V + +L+SA
Sbjct: 156 SRCGSMWAAEEVFRRMEAP-DVVGYTSLVSA 185
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 110/266 (41%), Gaps = 32/266 (12%)
Query: 291 INGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
++ L+ GR+ DA +F+R+ N +++ + I G GQ + + +F M S ++ N
Sbjct: 49 LDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADM-LESGVAAN 107
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKA------------LQLY-----MTMRKLA 393
++ G ++L +A ++LY M +
Sbjct: 108 DFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEV 167
Query: 394 IDRTRST----FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
R + ++ L A G L + + +++ + N + TS M + C +
Sbjct: 168 FRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTS---MLAECPRM 224
Query: 450 NDAQAS---FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
Q + S +V A TAL++ YS +G A +FE + +++V ++ ++
Sbjct: 225 IGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVV----SWCSMM 280
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVP 532
C+R G + + +++F M S V P
Sbjct: 281 QLCIRDGRLEDALRVFSEMISEAVEP 306
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 272/553 (49%), Gaps = 71/553 (12%)
Query: 176 MPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFC 235
+ K V W +I+ +A+S D + AL F MR+ + PN TF I++C+ L C
Sbjct: 46 VDKTSVYSWNSIIADFARSGDSLQ-ALYAFSSMRKLSLH-PNRSTFPCTIKSCSSLYDLC 103
Query: 236 EGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI 295
GK +H G+ D + ALI+ Y C + A +++D + + + S+I+G +
Sbjct: 104 AGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYV 163
Query: 296 SMGRIEDAELIFNRLTEANSISY------------------------------------- 318
R +A +F + Y
Sbjct: 164 QNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGL 223
Query: 319 -------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
N+++ YA G++ S+++F+ M E + +
Sbjct: 224 AVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME-----------------ETDVCS 266
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHAHL 424
WNS+I+ Y QN L +A L+ M K R + T S + AC+ G+LQ G+ +H +
Sbjct: 267 WNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQV 326
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
VK E N+ VGTS+VDMY +CG + A+ +F + NV +WT ++ GY HG G EA+
Sbjct: 327 VKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAM 386
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDL 543
+F M+ I PN TFV VL+AC AGL+ EG F MK + V P +EHY+C+VDL
Sbjct: 387 KVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDL 446
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
LGR+G+L EA I++M ++ D +VWG+LL AC N+E+GE +A+K+F LD Y
Sbjct: 447 LGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYY 506
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
V+LSNIYA G+W +R + + + K PG S +E RVH F V D+ +P IY
Sbjct: 507 VLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIY 566
Query: 664 ATLEHLTANLNSV 676
L+ L L V
Sbjct: 567 EYLDELNVKLQEV 579
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 132/570 (23%), Positives = 245/570 (42%), Gaps = 69/570 (12%)
Query: 38 RNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
R++F + +T V SWN+++ +++ ++L S+M + ++ N +TF + C+
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L L GKQIH GY FV S L+ Y+ C + +A+++FDE+ E N + W+ M
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 157 LVGYVQCNLMSDA---FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ GYVQ +A F F+ + + D + G + GC
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGC--------------- 203
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
VI ACAR+ + VHGL +K GFE ++G L++ Y C +
Sbjct: 204 ----------VISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSR 253
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDD 333
+V+D +E + + NSLI G +A +F+ + + + YN++ +
Sbjct: 254 KVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHS 313
Query: 334 SKRLFEKMPHRSIISLNTMISVI--------------PEMER---------NPVTWNSMI 370
K H ++ + +++ EM R N +W M+
Sbjct: 314 GALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMV 373
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPF 429
+GY + ++A++++ M + I TF + ACS G L++G + +
Sbjct: 374 AGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDV 433
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFE 488
E + + +VD+ R G + +A + P+ W +L+ H + V L E
Sbjct: 434 EPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIH----KNVELGE 489
Query: 489 IMLEQ--DIVP-NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT-----LEHYTCV 540
I + + P N +V + + AG ++ ++ MK++G++ T +EH V
Sbjct: 490 ISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRV 549
Query: 541 -VDLLGRSGHLHEAE--EFIKDMPIELDAV 567
V L+G H + E++ ++ ++L V
Sbjct: 550 HVFLVGDKEHPQHEKIYEYLDELNVKLQEV 579
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 85/224 (37%), Gaps = 63/224 (28%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+ET + S N I +NG V A +LF M
Sbjct: 260 EETDVCSWNSLIAVYAQNGLSVEAFSLFSDM----------------------------- 290
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+ R V+ N T S +L CA +L GK IH V+K E VG+ ++ Y C
Sbjct: 291 -VKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCG 349
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+E A++ FD L N W++M+ GY + G+ K
Sbjct: 350 RVEMARKAFDRLKRKNVKSWTVMVAGYG--------------------------MHGHGK 383
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+A+K+F M G PN TF SV+ AC+ G EG
Sbjct: 384 ------EAMKVFYEMIRCGIK-PNYITFVSVLAACSHAGLLKEG 420
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 195/699 (27%), Positives = 321/699 (45%), Gaps = 101/699 (14%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK--FDESLSLVSTMHRSNVKLNETTFS 88
+G L A +LFDQ+P V ++N ++ YS + + L L M R V N TF
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
L C+ L G+ IH + +G + FV + LL Y C + +A +F +
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ ML GY + A + M +++ R
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSM------------------------QMQMHRL- 224
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES----------IGGA 258
PN T +++ A+ GA +G VH I+ + + +G A
Sbjct: 225 ------RPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 278
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN---------- 308
L++ Y C + A RV+D + ++LI G + R+ A L+F
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 338
Query: 309 ------------------RLTE------------ANSISYNSMIKGYAVYGQVDDSKRLF 338
R+ E A+ + NS++ YA G +D + LF
Sbjct: 339 SPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 398
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
++M ++ V++++++SGYVQN E+A ++ M+ ++
Sbjct: 399 DEM-----------------AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDA 441
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
+T L ACS L +LQ G+ H ++ S + +L+DMY++CG I+ ++ F+
Sbjct: 442 ATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNM 501
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ S ++ +W ++ GY HGLG EA LF M P+ TF+ +LSAC +GLV EG
Sbjct: 502 MPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEG 561
Query: 519 MKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
F M YG+ P +EHY C+VDLL R G L EA EFI+ MP+ D VW ALL AC
Sbjct: 562 KHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACR 621
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
+ N+++G++ ++ + L + +V+LSNIY+ G++ + ++R KK PGC
Sbjct: 622 VYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGC 681
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
SWIE+N +HAF D+++P IY L+++ + +
Sbjct: 682 SWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKL 720
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 82/159 (51%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ + N ++ + G + A LFD+M ++ VS++ ++ GY + + +E+ + M
Sbjct: 375 LTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 434
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
NV+ + T +++ C+ L +L G+ H V+ G + + L+ YA C I+
Sbjct: 435 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 494
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM 176
+++VF+ + + + W+ M+ GY L +A +F++M
Sbjct: 495 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEM 533
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 118/304 (38%), Gaps = 47/304 (15%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
+ ET I N I + G++ +R +F+ MP R +VSWNTM+ GY E+ +L
Sbjct: 472 LASETSIC--NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATAL 529
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
M+ + TF +LS C+ +I+GK F +G G Y
Sbjct: 530 FLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHW-----------FHVMGHG----YGL 574
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISG 190
+E + D L + +A++ MP + DV VW L+ G
Sbjct: 575 TPRMEHYICMVDLLSRG---------------GFLDEAYEFIQSMPLRADVRVWVALL-G 618
Query: 191 YAKSVDGCEKALKLFRWMRESG-ENMPNEYTFDSVIRACARLGAFCEGKV---VHGLLIK 246
+ + K+ R ++E G E N ++ A R E ++ V G
Sbjct: 619 ACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKS 678
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
G + E I G+L F G ++ + +Y L+N ++ G+ +G D +
Sbjct: 679 PGCSWIE-INGSLHAFVGGDQSHPQSPEIYRELDN--------ILVGIKKLGYQPDTSFV 729
Query: 307 FNRL 310
L
Sbjct: 730 LQDL 733
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 195/667 (29%), Positives = 333/667 (49%), Gaps = 58/667 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I G+ G L A LFD+MP + ++SWN+++ G+S+ + E+ ++ S
Sbjct: 249 NAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDG 308
Query: 82 L--NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
L + T T+L VC+ ++ G IH + +K G V + L+ Y+ C + EA
Sbjct: 309 LIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAA 368
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+F ++ + + W+ M+ Y + + + FD+ KM
Sbjct: 369 ILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKM----------------------- 405
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
WM E + NE T +++ AC + +HG ++ F++ E I A
Sbjct: 406 -------WMEEELMEV-NEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAF 457
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANS 315
I Y C + A V+ + +++ N++I G G A + +T +
Sbjct: 458 IAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDD 517
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV------------------IP 357
S S++ G + K + R+ + +N+ ++V
Sbjct: 518 FSIVSLLLACGRLGLLQYGKEI-HGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFE 576
Query: 358 EM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
M ++N V WN+M+SGY QN L +AL L+ M ++ + + ACS L +L
Sbjct: 577 TMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGL 636
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +H +K + +V SL+DMY++ G + +Q F+ ++ VA+W ++ G+
Sbjct: 637 GKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGV 696
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLE 535
HG G++AV LFE M D P+ TF+GVL AC AGLV+EG+ M++ Y + P LE
Sbjct: 697 HGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELE 756
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL 595
HY CV+D+LGR+G L+EA FI +MP E DA +W +LLS+ ++++E+GE+ A+K+ L
Sbjct: 757 HYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLAL 816
Query: 596 DKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN 655
+ +Y++LSN+YA GKW +R+++ L ++KD GCSWIEL +V++F + +
Sbjct: 817 EANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENS 876
Query: 656 NPNCNVI 662
NP+ + I
Sbjct: 877 NPSSDEI 883
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/533 (23%), Positives = 227/533 (42%), Gaps = 92/533 (17%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL-SLVSTMHRSNVKLNETTFSTI 90
G + +R +FD++ + + WN ++ GY + +DE++ + + + + + + TF +
Sbjct: 157 GYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCL 216
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
+ C + GK +H + +K G FVG+ ++ Y C ++EA +FD++ E N
Sbjct: 217 IKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQN- 275
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
++ W LI G++++ E A + FR + E
Sbjct: 276 ------------------------------LISWNSLIRGFSENGFWLE-AYRAFRSLLE 304
Query: 211 SGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
SG+ + P+ T +++ C+ G G V+HG+ +K G + + ALI+ Y C
Sbjct: 305 SGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCL 364
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRI----------------------------- 300
A ++ ++EN + + NS+I G +
Sbjct: 365 SEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLP 424
Query: 301 ---EDAELIFNRLTEANSISY---------NSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
E++EL+ R S+ + N+ I YA G + ++ +F M +S+ S
Sbjct: 425 ACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSS 484
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
WN++I G+ QN KAL Y M +L I + L AC
Sbjct: 485 -----------------WNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLAC 527
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
LG LQ G+ +H +++ E N +V SL+ +Y C + F ++ N W
Sbjct: 528 GRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWN 587
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
A+++GYS + L +EA+ LF ML + P+ +L AC + + G ++
Sbjct: 588 AMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEV 640
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 200/454 (44%), Gaps = 44/454 (9%)
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
++ Y C ++ VF ++ K++ W L+SGY ++ + ++A+ F + E
Sbjct: 149 LITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRN-ELYDEAIHTFLELISVTEFQ 207
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ +TF +I+AC GK VHG+ +K G D +G A+I Y C D A+ +
Sbjct: 208 PDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVEL 267
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS---ISYNSMIK--------- 323
+D++ L + NSLI G G +A F L E+ +M+
Sbjct: 268 FDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEG 327
Query: 324 ----GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------ERNPVTWNSMIS 371
G ++G + E M ++I + + + E ++ V+WNSMI
Sbjct: 328 NVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIG 387
Query: 372 GYVQNNLHEKALQLY--MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
Y + + L M M + ++ T L AC L + LH + ++ F
Sbjct: 388 AYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSF 447
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ + + + Y++CGS+ A+ F +++ +V++W A++ G++ +G +A+ +
Sbjct: 448 QYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFE 507
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR-------SMKSYGVVPTLE-HYTCVV 541
M I+P+ + V +L AC R GL+ G +I M S+ V L ++ C
Sbjct: 508 MTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSK 567
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
GR+ + + M + ++V W A+LS
Sbjct: 568 PFYGRT--------YFETMG-DKNSVCWNAMLSG 592
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 137/285 (48%), Gaps = 23/285 (8%)
Query: 295 ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
+ +GR D L + + + +I Y++ G +S+ +F+++ ++++
Sbjct: 123 VEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQW----- 177
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACSCLGS 413
N+++SGYV+N L+++A+ ++ + + TF L AC+
Sbjct: 178 ------------NALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCD 225
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
+ G+ +H VK +++VG +++ +Y +CG +++A F + N+ +W +L+ G
Sbjct: 226 IHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRG 285
Query: 474 YSHHGLGSEAVLLFEIMLE--QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
+S +G EA F +LE ++P+ AT V +L C G V+ GM I G+V
Sbjct: 286 FSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLV 345
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV-WGALLSA 575
L ++D+ + G L EA + IE +VV W +++ A
Sbjct: 346 HELMVCNALIDMYSKCGCLSEAAILFR--KIENKSVVSWNSMIGA 388
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHL-VKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ + + +L C +++ G+ L L V + F + + T L+ MYS CG ++
Sbjct: 103 LAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLES 162
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVR 511
+ F + + N+ W AL++GY + L EA+ F E++ + P+ TF ++ AC
Sbjct: 163 RLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTG 222
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
++ G + G++ L ++ L G+ G L EA E MP E + + W +
Sbjct: 223 KCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP-EQNLISWNS 281
Query: 572 LL---SACWFWM 580
L+ S FW+
Sbjct: 282 LIRGFSENGFWL 293
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 271/507 (53%), Gaps = 57/507 (11%)
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG--ENMPNEYTFDSVIRACARLGAF 234
P + +W +I Y+K + E R + G + +P+EYTF VI +C+ +
Sbjct: 135 PSPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISL 194
Query: 235 CEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL 294
G++VHG+++K GFE + +G NS+IN
Sbjct: 195 IYGEIVHGMVVKSGFESNLYVG-------------------------------NSVINMC 223
Query: 295 ISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS 354
R+EDA +FN+++E + S+ S++ GYA +G++D + LF MP
Sbjct: 224 SVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRACELFNMMP------------ 271
Query: 355 VIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL---FHACSCL 411
RN V+W MISG++ + +AL + M L DR +VL AC+ L
Sbjct: 272 -----VRNDVSWAVMISGFLGCGRYPEALTFFCNM--LCDDRVNPNEAVLVCVLSACAHL 324
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
G+L QG +H ++ K + + T+L+DMY++CG I+ A F+ I +V ++T+++
Sbjct: 325 GALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMI 384
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGV 530
+G S+HGLG +A+ +F ML+++++PN T +GVL+ C +GLV EG I +M+S +G+
Sbjct: 385 SGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSILANMESLWGI 444
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
P +EHY C +DLLGR+G+L A E +K MP+E D V+W ALLSA N+ +GE+
Sbjct: 445 APKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNVNLGEQIIS 504
Query: 591 KMFGLDKKPIS-AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+ L + V+LSN+YA LG+W + ++RK + + PGCSWIE+N VH F
Sbjct: 505 HIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSWIEVNGLVHEF 564
Query: 650 SVEDRNNPNCNVIYATLEHLTANLNSV 676
V D+ +P I L + L+ +
Sbjct: 565 RVADQLHPQIVEIRNKLNEILKRLSQI 591
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 169/346 (48%), Gaps = 26/346 (7%)
Query: 16 TLIVSTNKAITE-------CGRNGQLVTARNLFDQMPIRT--VVSWNTMLCGYSKWAKFD 66
T +S+N ++T C +N AR LFD P + + WN M+ YSK
Sbjct: 99 TQALSSNASLTASLIHCYLCAKNHP--NARILFDHYPSPSPPIKLWNVMIRTYSKIRNSQ 156
Query: 67 ESLSLVSTM----HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
E + L M V +E TF+ +++ C+ SLI G+ +H +V+KSG+E +VG
Sbjct: 157 EPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHGMVVKSGFESNLYVG 216
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ ++ + +E+A++VF+++ E + W+ +L GY + M A ++F MP ++ V
Sbjct: 217 NSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRACELFNMMPVRNDV 276
Query: 183 VWTKLISGYAKSVDGC---EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
W +ISG+ GC +AL F M PNE V+ ACA LGA +G
Sbjct: 277 SWAVMISGFL----GCGRYPEALTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNW 332
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR 299
+H + K G +I ALI+ Y C D A RV++ + + + S+I+GL G
Sbjct: 333 IHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGL 392
Query: 300 IEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+DA +F ++ + N I+ ++ G + G V++ + M
Sbjct: 393 GKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSILANM 438
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 10/180 (5%)
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
TFS+L + L LQQ +HA +V SN + SL+ Y + +A+ F
Sbjct: 76 TFSLLLNQRPKLSPLQQ---IHAQVVTQALSSNASLTASLIHCYLCAKNHPNARILFDHY 132
Query: 460 SSPN--VAAWTALMNGYSHHGLGSEAVLLFEIMLEQD----IVPNAATFVGVLSACVRAG 513
SP+ + W ++ YS E + LF ML D +VP+ TF V+++C
Sbjct: 133 PSPSPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQI 192
Query: 514 LVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G + + G L V+++ + +A + M E D W +LL
Sbjct: 193 SLIYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMS-ERDVFSWTSLL 251
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 272/493 (55%), Gaps = 28/493 (5%)
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+G P+ ++ +++ C LG +GK+VH L+ F D I +++ Y C + +
Sbjct: 84 NGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLE 143
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDA--------ELIFNRLTEANSISYNSMI 322
A +V+D + + S+I G G A E++ + L N + +S++
Sbjct: 144 IARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGL-RPNEFALSSLV 202
Query: 323 KGYAVYGQVDDSKRL--------FEK--MPHRSIISLNTMIS-------VIPEME-RNPV 364
K G D K++ F++ S++ + V E+E +N V
Sbjct: 203 KCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEV 262
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+WN++ISG+ + E+AL L++ M++ T T+S L + S GSL+QG+ LHAH+
Sbjct: 263 SWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHM 322
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
+K+ + YVG +L+ MY++ G+I DA+ F + +V + +++ GY+ HGLG EAV
Sbjct: 323 MKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAV 382
Query: 485 LLFE-IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
LFE +ML +I PN TF+ VL+AC AGL++EG+ F MK YG+ P L HYT VVDL
Sbjct: 383 ELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDL 442
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
GR+G L +A+ FI++MPIE +A +WGALL A N E+G AAQK+ LD A+
Sbjct: 443 FGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAH 502
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
+LSNIYA G+W +RK + +KK+P CSW+E+ + VH FS D ++P N +Y
Sbjct: 503 TLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVY 562
Query: 664 ATLEHLTANLNSV 676
E+L + +
Sbjct: 563 EMWENLNQKIKEI 575
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 220/487 (45%), Gaps = 57/487 (11%)
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
L ++ ++ +++ + T ++ +L C L L GK +H ++ S + + + +LF
Sbjct: 76 LHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFM 135
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
YA C +E A++VFDE+ + + W+ M+ GY Q
Sbjct: 136 YAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQ-------------------------- 169
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
GYA S AL LF M G PNE+ S+++ C LG+ +GK +HG K G
Sbjct: 170 DGYASSA---TTALVLFLEMVRDGLR-PNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYG 225
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
F+ + +G +L++ Y C + V+D LE+ + N+LI+G G E+A +F
Sbjct: 226 FQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFV 285
Query: 309 RLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKM--PHRSIISL--NTMISVIPE-- 358
++ A +Y++++ + G ++ K L M + ++ NT++ + +
Sbjct: 286 KMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSG 345
Query: 359 ------------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRK-LAIDRTRSTFSVLF 405
++ + V+ NSM+ GY Q+ L ++A++L+ M + I+ TF +
Sbjct: 346 NICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVL 405
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNV 464
ACS G L +G + K E + T++VD++ R G ++ A++ + PN
Sbjct: 406 TACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNA 465
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQD-IVPNAATFVGVLSACVRAGLVNEGMKIFR 523
W AL+ H + +LE D P A T + + A AG + K+ +
Sbjct: 466 TIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYA--SAGQWKDVAKVRK 523
Query: 524 SMKSYGV 530
MK G+
Sbjct: 524 EMKDSGL 530
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 150/313 (47%), Gaps = 29/313 (9%)
Query: 272 AMRVYDRLENPCLNASNSLINGLIS----MGRIEDAELIFNRLTEA----NSISYNSMIK 323
+ V D + N L ++ N L+ +G+++ +L+ L + + + NS++
Sbjct: 75 GLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILF 134
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA- 382
YA G ++ ++++F++M + + VTW SMI+GY Q+ A
Sbjct: 135 MYAKCGSLEIARQVFDEMCVKDV-----------------VTWTSMITGYSQDGYASSAT 177
Query: 383 --LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
L L++ M + + S L C LGS G+ +H K F+ NV+VG+SLV
Sbjct: 178 TALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLV 237
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
DMY+RCG + +++ F + S N +W AL++G++ G G EA+ LF M +
Sbjct: 238 DMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEF 297
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
T+ +L + G + +G + M G ++ + +SG++ +A++ + D
Sbjct: 298 TYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKK-VFDR 356
Query: 561 PIELDAVVWGALL 573
+++D V ++L
Sbjct: 357 LVKVDVVSCNSML 369
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 33/237 (13%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
QE + V ++ + R G+L +R +FD++ + VSWN ++ G+++ + +E+L L
Sbjct: 227 QENVFVGSS-LVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFV 285
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M R E T+S +L + SL GK +H ++KSG + +VG+ LL YA
Sbjct: 286 KMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSG 345
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
I +AK+VFD L + + + + ML+GY Q L +A ++F +++++W ++
Sbjct: 346 NICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELF-----EEMMLWVEI------ 394
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
PN+ TF SV+ AC+ G EG L+ K G E
Sbjct: 395 ---------------------EPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLE 430
>gi|357490817|ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517031|gb|AES98654.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 201/702 (28%), Positives = 339/702 (48%), Gaps = 71/702 (10%)
Query: 23 KAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL 82
K ++ + G L AR +F++M +R + +W+ M+ G S+ + E + L M R V
Sbjct: 122 KLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLP 181
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
+E +L C + L G+ IH +V++ G + + + ++ YA C E++ AK++F
Sbjct: 182 DEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIF 241
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV----VVWTKLISGYAKSVDGC 198
D + E + + W+ M+ G+ Q + A F M K V V W LIS Y + + C
Sbjct: 242 DCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQ-LGHC 300
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLG-------------------------- 232
+ A+ L R M G P+ YT+ S+I + G
Sbjct: 301 DLAIDLMRKMEWFGI-APDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIAS 359
Query: 233 ---------AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
+ G +H + +K + +G +LI+ YC C A ++D +
Sbjct: 360 AASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERD 419
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEANS----ISYNSMIKGYAVYGQVDDSKRLFE 339
+ + NS+I G G A +F ++ E++S I++N MI GY G D + LF+
Sbjct: 420 VYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFK 479
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+ + +RN +WNS+ISG+VQ+ +KALQ++ M+ I
Sbjct: 480 SIEKDG------------KTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSV 527
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T + C+ L + ++ + +H V+ S + V L+D Y++ G++ ++ F+ +
Sbjct: 528 TILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIFNEL 587
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
S + +W ++++ Y HG A+ LF M +Q + PN TF +L A AG+V+EG
Sbjct: 588 SWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGMVDEGK 647
Query: 520 KIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
+F + K Y V +EHY+ +V LLGRSG L EA +FI+ MPIE ++ VWGALL+AC
Sbjct: 648 SVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALLTACRI 707
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW---GKKMDIRKRLTHLEVKKDP 635
N V A ++M + +LS Y++ GK+ G+K V K
Sbjct: 708 HRNFGVAVLAGKRMLEFEPGNNITRHLLSQAYSLCGKFEPEGEK----------AVNKPI 757
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSVV 677
G SWIE N+ VH F V D++NP + +++ L+ + N+ + V
Sbjct: 758 GQSWIERNNVVHTFVVGDQSNPYLDKLHSWLKRVAVNVKTHV 799
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 223/502 (44%), Gaps = 54/502 (10%)
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLV-LKSGYECFEFVGS 123
E+++++ ++ ++ T+ +L C + + GK++H + L FV +
Sbjct: 64 LSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHSRIGLVENVN--PFVET 121
Query: 124 GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
L+ YA C + A++VF+E+ N WS M+ G + + +F
Sbjct: 122 KLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLF---------- 171
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
YA DG +P+E+ V++AC + G+++H +
Sbjct: 172 -------YAMMRDGV----------------LPDEFLLPKVLQACGKCRDLETGRLIHSM 208
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA 303
+I+ G + + + +++ Y C D A +++D ++ A N++I+G G I A
Sbjct: 209 VIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQA 268
Query: 304 ELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM 359
+ F+ + E + +++N +I Y G D + L KM + P++
Sbjct: 269 QKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKM---------EWFGIAPDV 319
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
TW SMISG+ Q AL L M ++ T + AC+ L SL G
Sbjct: 320 ----YTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLE 375
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+H+ VK NV VG SL+DMY +CG + AQ F +S +V +W +++ GY G
Sbjct: 376 IHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGF 435
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP-TLEHYT 538
+A LF M E D PN T+ +++ +++G ++ + +F+S++ G +
Sbjct: 436 CGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWN 495
Query: 539 CVVDLLGRSGHLHEAEEFIKDM 560
++ +SG +A + ++M
Sbjct: 496 SLISGFVQSGQKDKALQIFRNM 517
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 11/240 (4%)
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T+ L +C + G+ LH+ + N +V T LV MY++CG + A+ F+ +
Sbjct: 85 TYMNLLQSCIDKDCIFIGKELHSRIGLVE-NVNPFVETKLVSMYAKCGLLGMARKVFNEM 143
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
S N+ W+A++ G S + E V LF M+ ++P+ VL AC + + G
Sbjct: 144 SVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLETGR 203
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFW 579
I + G+ + ++ + + G + A++ I D E D+V W A++S F
Sbjct: 204 LIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKK-IFDCMDERDSVAWNAMISG--FC 260
Query: 580 MNMEVGERAAQKMFGLDKK-----PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
N E+G+ AQK F +K + + IL + Y LG +D+ +++ + D
Sbjct: 261 QNGEIGQ--AQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPD 318
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I ++G L+ ++N+F+++ + VSWN+ML Y + +L L M + +
Sbjct: 564 SNLLIDSYAKSGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGL 623
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQI-HCL----VLKSGYECFEFVGSGLLFFYANCFEI 135
+ N TF++IL + +GK + C+ +++ G E + S +++ ++
Sbjct: 624 QPNRGTFASILLAYGHAGMVDEGKSVFSCITKDYLVRQGMEHY----SAMVYLLGRSGKL 679
Query: 136 EEAKRVFDELH-EDNELLWSLMLVG 159
EA + E N +W +L
Sbjct: 680 AEALDFIQSMPIEPNSSVWGALLTA 704
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/590 (30%), Positives = 301/590 (51%), Gaps = 84/590 (14%)
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
E F IL C ++++ K+IH ++K F+ + ++ + E E A +F
Sbjct: 14 EDIFVPILKNCP---NIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFK 70
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ + N L++ M+ Y + A V+ +M G++
Sbjct: 71 RVADPNAFLYNAMIRAYKHNKVYVLAITVYKQM------------LGHS----------- 107
Query: 204 LFRWMRESGEN--MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
GEN P+++TF V+++CA L + GK VHG + K G + + + +L+E
Sbjct: 108 -------HGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVE 160
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
Y C++ D DA +F +TE +++S+N++
Sbjct: 161 MYVKCDSLD-------------------------------DAHKVFEEMTERDAVSWNTL 189
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK 381
I G+ GQ+ ++ +FE+M ++I S W +++SGY + +
Sbjct: 190 ISGHVRLGQMRRARAIFEEMQDKTIFS-----------------WTAIVSGYARIGCYAD 232
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
AL+ + M+ + I+ + + AC+ LG+L+ G+ +H + K F N+ V +L++
Sbjct: 233 ALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIE 292
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MY++CGSI++ + F ++ +V +W+ ++ G ++HG EA+ LF+ M + I PN T
Sbjct: 293 MYAKCGSIDEGRRLFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIIT 352
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
FVG+LSAC AGL+NEG++ F SMK Y + P +EHY C+V+LLG SG L +A E IK M
Sbjct: 353 FVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKM 412
Query: 561 PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKM 620
P++ D+ +WG+LLS+C N+E+ A + + L+ YV+LSN+YA LGKW
Sbjct: 413 PMKPDSAIWGSLLSSCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVS 472
Query: 621 DIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
+RK + +KK PGCS IE+++ V F+ D + P IY L+ L
Sbjct: 473 RMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDDSKPFSKAIYRVLKLLV 522
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 223/458 (48%), Gaps = 35/458 (7%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
K++A + ++Q + +V+ K + C + + A LF ++ +N M+ Y
Sbjct: 32 KIHAHIVKFSLSQSSFLVT--KMVDVCNHHAETEYANLLFKRVADPNAFLYNAMIRAYKH 89
Query: 62 WAKFDESLSLVSTM----HRSN-VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYE 116
+ ++++ M H N + ++ TF ++ CA L GKQ+H V K G +
Sbjct: 90 NKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQK 149
Query: 117 CFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM 176
V + L+ Y C +++A +VF+E+ E + + W+ ++ G+V+ M A +F +M
Sbjct: 150 SNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEM 209
Query: 177 PKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFC 235
K + WT ++SGYA+ GC AL+ FR M+ G P+E + SV+ ACA+LGA
Sbjct: 210 QDKTIFSWTAIVSGYARI--GCYADALEFFRRMQMVGIE-PDEISLVSVLPACAQLGALE 266
Query: 236 EGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI 295
GK +H K GF + + ALIE Y C + D R++D++ + + +++I GL
Sbjct: 267 LGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVGLA 326
Query: 296 SMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
+ GR +A +F + +A N I++ ++ A G +++ R FE M I
Sbjct: 327 NHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIE--- 383
Query: 352 MISVIPEMERNPVTWNSM-ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
P +E N + +SG + ++AL+L ++K+ + + + L +C
Sbjct: 384 -----PGVEHYGCLVNLLGLSGRL-----DQALEL---IKKMPMKPDSAIWGSLLSSCRS 430
Query: 411 LGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCG 447
+L+ + HL++ P ++ YV L ++Y+ G
Sbjct: 431 HSNLEIAVIAMEHLLELEPADTGNYV--LLSNLYADLG 466
>gi|345505232|gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
Length = 579
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 278/529 (52%), Gaps = 62/529 (11%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+D +W +I ++ D +AL LF M E G + ++++ V++AC+RLG G
Sbjct: 50 EDPYLWNAMIKSHSHGTDP-RRALLLFCLMLEIGVPV-DKFSLSLVMKACSRLGFVKGGL 107
Query: 239 VVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
+HG L K G D + LI Y CGC F A +++DR+ + NS+I+G +
Sbjct: 108 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGF--ARQIFDRMPQRDSVSYNSMIDGYVK 165
Query: 297 MGRIEDAELIFN----------------------------------RLTEANSISYNSMI 322
G IE A +F+ + E + IS+NSMI
Sbjct: 166 CGSIESASELFDLMPREMKNLISWNSLISGYAQTSEGVDIASKLFAEMPEKDLISWNSMI 225
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNS 368
GY +G+++D+K LF+ +P R +++ TMI ++ R+ V +NS
Sbjct: 226 DGYVKHGRIEDAKDLFDMVPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVAYNS 285
Query: 369 MISGYVQNNLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
M++GYVQN H +AL+++ M K L+ D T T ++ A + LG L + +H ++V
Sbjct: 286 MMAGYVQNRFHMEALEIFSDMEKESHLSPDET--TLVIVLSAIAQLGRLSKAMDMHLYIV 343
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ F +G +L+DMYS+CGSI A F I + ++ W A++ G + HGLG A
Sbjct: 344 EKQFLLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFD 403
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
+ + + I P+ TFVGVL+AC +GLV EG+ F M + + + P L+HY C+VD+L
Sbjct: 404 MLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDIL 463
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM-FGLDKKPISAY 603
RSG + A+ I++MPIE + V+W L+AC E GE A+ + D P S+Y
Sbjct: 464 SRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQADYNP-SSY 522
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
V+LSN+YA G W +R + +++K PGCSWIEL+ VH F V+
Sbjct: 523 VLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGXVHEFFVD 571
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 196/427 (45%), Gaps = 28/427 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+MP R VS+N+M+ GY K + + L M R L ++++++
Sbjct: 136 GCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSIESASELFDLMPREMKNL--ISWNSLI 193
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S AQ + +G I + E + ++ Y IE+AK +FD + + +
Sbjct: 194 SGYAQTS---EGVDIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDMVPRRDVV 250
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY + + A +F +MP +DVV + +++GY ++ E AL++F M +
Sbjct: 251 TWATMIDGYAKLGFVHQAKTLFDQMPHRDVVAYNSMMAGYVQNRFHME-ALEIFSDMEKE 309
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T V+ A A+LG + +H +++ F +G ALI+ Y C +
Sbjct: 310 SHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFLLGGKLGVALIDMYSKCGSIQH 369
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSISYNSMIKGYAV 327
AM V++ +EN ++ N++I GL G E A I R + + I++ ++ +
Sbjct: 370 AMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSH 429
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V + FE M + I P ++ + M+ ++ E A L
Sbjct: 430 SGLVKEGLLCFELMRRKHKIE--------PRLQH----YGCMVDILSRSGSIELAKNL-- 475
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRC 446
+ ++ I+ + ACS + G+L+ HL+ + + + YV L +MY+
Sbjct: 476 -IEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQADYNPSSYV--LLSNMYASF 532
Query: 447 GSINDAQ 453
G D +
Sbjct: 533 GMWKDVR 539
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 145/369 (39%), Gaps = 70/369 (18%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW-----AK--FD- 66
E ++S N I ++G++ A++LFD +P R VV+W TM+ GY+K AK FD
Sbjct: 215 EKDLISWNSMIDGYVKHGRIEDAKDLFDMVPRRDVVTWATMIDGYAKLGFVHQAKTLFDQ 274
Query: 67 -----------------------ESLSLVSTMHR-SNVKLNETTFSTILSVCAQLNSLID 102
E+L + S M + S++ +ETT +LS AQL L
Sbjct: 275 MPHRDVVAYNSMMAGYVQNRFHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSK 334
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
+H +++ + +G L+ Y+ C I+ A VF+ + + W+ M+ G
Sbjct: 335 AMDMHLYIVEKQFLLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAI 394
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
L AFD+ +++ ++ + P++ TF
Sbjct: 395 HGLGESAFDMLLQIERRSI---------------------------------KPDDITFV 421
Query: 223 SVIRACARLGAFCEGKVVHGLL-IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE- 280
V+ AC+ G EG + L+ K E G +++ + + A + + +
Sbjct: 422 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPI 481
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRL---TEANSISYNSMIKGYAVYGQVDDSKRL 337
P + + E EL+ L + N SY + YA +G D +R+
Sbjct: 482 EPNDVIWRTFLTACSHHKEFETGELVAKHLILQADYNPSSYVLLSNMYASFGMWKDVRRV 541
Query: 338 FEKMPHRSI 346
M R I
Sbjct: 542 RTMMKERKI 550
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 299/607 (49%), Gaps = 62/607 (10%)
Query: 88 STILSVCAQLNSLID-------GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ L LNSL++ QIH ++ + F+ + LL YA C +++
Sbjct: 24 TPFLHPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLL 83
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+F +D+ K+VV WT LI+ + K
Sbjct: 84 LFSSAPDDS-----------------------------KNVVSWTSLITQLTR-FKRPFK 113
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL F MR SG PN YTF +V+ AC A G+ +H L+ K GF + + AL+
Sbjct: 114 ALTFFNHMRRSGV-YPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALV 172
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-----ELIFNRLTEANS 315
+ Y C A +V++ + L + N++I G + + A L+ LT +
Sbjct: 173 DMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDE 232
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM---------------- 359
+S++S+ A G ++ K++ + +L + + + +M
Sbjct: 233 VSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSN 292
Query: 360 --ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
R+ VTWN MI YV N+ +E A + MR+ +++S + H+C+ L +L QG
Sbjct: 293 TGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQG 352
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
L+H ++++ F N+ V +SL+ MY++CGS+ DA F NV WTA++ H
Sbjct: 353 TLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQH 412
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEH 536
G + V LFE ML + I P+ TFV VLSAC G V EG F SM K +G+ P EH
Sbjct: 413 GHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEH 472
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
Y C+VDLL R+G L A+ FI+ MPI+ DA VWGALLSAC N+ +G+ A K+F L+
Sbjct: 473 YACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLE 532
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
YV+L NI G + ++R+++ + V+K+PGCSWI++ + + F+V D+++
Sbjct: 533 PDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSH 592
Query: 657 PNCNVIY 663
IY
Sbjct: 593 EKTKEIY 599
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 236/539 (43%), Gaps = 80/539 (14%)
Query: 27 ECGRNGQLVTARNLFDQMP--IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
+CG Q + LF P + VVSW +++ +++ + ++L+ + M RS V N
Sbjct: 74 KCGSVDQTLL---LFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNH 130
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
TFS +LS C + + G+Q+H LV K G+ FV S L+ YA C ++ A++VF+E
Sbjct: 131 YTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEE 190
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+ N + W+ M+VG++Q L A F K L L
Sbjct: 191 MPVRNLVSWNTMIVGFLQNKLYDQAIFFF--------------------------KTLLL 224
Query: 205 FRWMRESGENMP--NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
EN+ +E +F SV ACA G GK VHG+ +K G I +L +
Sbjct: 225 --------ENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDM 276
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI----SY 318
Y C F+ +++ + N +I + EDA F + SI SY
Sbjct: 277 YGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASY 336
Query: 319 NSMI----------KGYAVYGQVDDSKRLFEKMPHRSII-------SLNTMISVIPEME- 360
+S++ +G ++ Q+ S + S+I SL + E E
Sbjct: 337 SSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETED 396
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
RN V W ++I+ Q+ ++L+ M + I TF + ACS G +++G
Sbjct: 397 RNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFY 456
Query: 421 HAHLVKTPFESNVYVG----TSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYS 475
++K +Y G +VD+ SR G ++ A+ + P+ + W AL++
Sbjct: 457 FNSMIKV---HGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACR 513
Query: 476 HHG---LGSEAVL-LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
+H +G E L LF+ LE D N +V + + R G++NE ++ R M+S GV
Sbjct: 514 NHSNLIMGKEVALKLFD--LEPD---NPGNYVLLCNILTRNGMLNEADEVRRKMESIGV 567
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 34/230 (14%)
Query: 18 IVSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
+V N ++++ G+ G LF R VV+WN M+ Y ++++ + M
Sbjct: 266 LVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMR 325
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
R +E ++S++L CA L +L G IH +++SG+ V S L+ YA C +
Sbjct: 326 RKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLV 385
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+A ++F+E + N + W+ ++ Q G+A V
Sbjct: 386 DAFQIFEETEDRNVVCWTAIIAACQQ--------------------------HGHANWV- 418
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
++LF M G P+ TF SV+ AC+ G EG +IK
Sbjct: 419 -----VELFEQMLREGIK-PDYITFVSVLSACSHTGRVEEGFFYFNSMIK 462
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 190/695 (27%), Positives = 334/695 (48%), Gaps = 102/695 (14%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
+L AR LFD+MP R ++S+N+++ GY++ +++++ L N+KL++ T++ L
Sbjct: 98 ELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALG 157
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
C + L GK +H LV+ +G F+ + L+ Y+ C ++++A +FD
Sbjct: 158 FCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFD--------- 208
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
+CN ++D V W LISGY + V E+ L L M +G
Sbjct: 209 ---------RCN-------------ERDQVSWNSLISGYVR-VGAAEEPLNLLAKMHRAG 245
Query: 213 ENMPNEYTFDSVIRACA---RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+ Y SV++AC G +G +H K G EFD + AL++ Y +
Sbjct: 246 LKLTT-YALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSL 304
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDA------------------------EL 305
A++++ + + N++I+G + M I D +
Sbjct: 305 KEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSV 364
Query: 306 IFNRLTEANSISY--------------------NSMIKGYAVYGQVDDSKRLFEKMPHRS 345
+ + A ++ Y +++I+ YA+ G +D + F +
Sbjct: 365 VLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQD 424
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
I S W S+I +VQN E A L+ + I T S++
Sbjct: 425 IAS-----------------WTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMM 467
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
AC+ +L G+ + + +K+ ++ V TS + MY++ G++ A F + +P+VA
Sbjct: 468 SACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVA 527
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
++A+++ + HG +A+ +FE M + I PN F+GVL AC GLV G+ F++M
Sbjct: 528 TYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTHGVNYFQTM 587
Query: 526 K-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
K SYG+ P +H+TC+ DLLGR+G L +AE I + V+W ALLS+C + + +
Sbjct: 588 KNSYGINPNEKHFTCLADLLGRTGRLSDAENLILSSGFQDHPVMWRALLSSCRVYKDSVI 647
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
G+R A+++ L+ + +YV+L NIY G ++R+ + VKK+P SWI L +
Sbjct: 648 GKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVLGN 707
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANLNSVVLF 679
+ H+F+V D ++P+ +IY L+ +N+VV F
Sbjct: 708 QTHSFAVADWSHPSSQMIYTMLD----TMNTVVDF 738
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/539 (23%), Positives = 249/539 (46%), Gaps = 72/539 (13%)
Query: 71 LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
L S N L+ + + A+ SL+ GK H ++KS ++ + LL Y
Sbjct: 35 LSSLCQPKNTALDSEAYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYC 94
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
C E+ A+++FD +MP+++++ + LISG
Sbjct: 95 KCRELGFARQLFD-------------------------------RMPERNIISFNSLISG 123
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
Y + V E+A++LF R+ + +++T+ + C GK++HGL++ G
Sbjct: 124 YTQ-VGFYEQAMELFLEARDDNLKL-DKFTYAGALGFCGERCDLDFGKLLHGLVVVNGLS 181
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
+ LI+ Y C D AM ++DR + NSLI+G + +G E+ + ++
Sbjct: 182 QQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEEPLNLLAKM 241
Query: 311 TEAN-----------------SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII------ 347
A +++ M KG A++ F+ + +++
Sbjct: 242 HRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKN 301
Query: 348 -SLNTMISVIPEME-RNPVTWNSMISGYVQ-----NNLHEKALQLYMTMRKLAIDRTRST 400
SL I + M +N VT+N+MISG++Q + +A +L+M M++ ++ + ST
Sbjct: 302 GSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLEPSPST 361
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
FSV+ ACS +L+ G+ +HA + K F+S+ ++G++L+++Y+ GS D F+S S
Sbjct: 362 FSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTS 421
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
++A+WT++++ + + A LF + I P T ++SAC ++ G +
Sbjct: 422 KQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQ 481
Query: 521 IFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
I + Y + ++ YT V + + +SG++ A + ++ D + A++S+
Sbjct: 482 I----QGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQ-NPDVATYSAMISS 535
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 214/494 (43%), Gaps = 69/494 (13%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
++Q+ ++ N I + G+L A +LFD+ R VSWN+++ GY + +E L+L
Sbjct: 180 LSQQVFLI--NVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEEPLNL 237
Query: 72 VSTMHRSNVKLNETTFSTILSVCA-QLNS--LIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
++ MHR+ +KL ++L C LN + G IHC K G E V + LL
Sbjct: 238 LAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVVRTALLDM 297
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
YA ++EA ++F + N + ++ M+ G++Q + ++D
Sbjct: 298 YAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITD-------------------- 337
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
+ +A KLF M+ G P+ TF V++AC+ G+ +H L+ K
Sbjct: 338 -------EASSEAFKLFMEMQRRGLE-PSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 389
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
F+ DE IG ALIE Y + + M+ + + + S+I+ + ++E A +F
Sbjct: 390 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFR 449
Query: 309 RL-------------------TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
+L + ++S I+GYA+ +D + S IS+
Sbjct: 450 QLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSV-----KTSSISM 504
Query: 350 NTMISVIPEMER------NP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
+P + NP T+++MIS Q+ AL ++ +M+ I + F
Sbjct: 505 YAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAF 564
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDAQ-ASFSS 458
+ AC C G L + + +K + N T L D+ R G ++DA+ SS
Sbjct: 565 LGVLIAC-CHGGLVTHGVNYFQTMKNSYGINPNEKHFTCLADLLGRTGRLSDAENLILSS 623
Query: 459 ISSPNVAAWTALMN 472
+ W AL++
Sbjct: 624 GFQDHPVMWRALLS 637
>gi|345505234|gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
Length = 577
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 281/525 (53%), Gaps = 60/525 (11%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
KD +W +I ++ D KAL LF M E+G + ++++ V++AC+RLG EG
Sbjct: 56 KDPFLWNAVIKSHSHGADP-RKALLLFCLMLENGV-LVDKFSMSLVLKACSRLGFAKEGM 113
Query: 239 VVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
VHG LIK D + LI Y CGC F A +V+DR+ + NS+I+G +
Sbjct: 114 QVHGFLIKSRTWSDLFLQNCLIGLYLKCGCLGF--ARQVFDRMPQRDSVSYNSMIDGYVK 171
Query: 297 MGRIEDA-EL---------------------------------IFNRLTEANSISYNSMI 322
G +E A EL +F+ + E + IS+NSMI
Sbjct: 172 CGLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVNVASKLFDEMPEKDLISWNSMI 231
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ERNPVTWNS 368
GY +G+++D+K LF+ MP R +++ MI ++ +M R+ V +NS
Sbjct: 232 GGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHQAKTLFDQMPHRDVVAYNS 291
Query: 369 MISGYVQNNLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
M+SG+VQN H +AL+++ M K L+ D T T ++ A + LG L + +H ++V
Sbjct: 292 MMSGFVQNRYHIEALEVFNHMEKESHLSPDET--TLVIVLSAIAQLGRLTKAIDMHLYIV 349
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ F + +G +L+DMYS+CGSI A F I S ++ W A++ G + HGLG A
Sbjct: 350 EKRFLLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFD 409
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
+ + + I P+ TFVGVL+AC +GLV EG+ F M + + + P L+HY C+VD+L
Sbjct: 410 MLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDIL 469
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
RSG + A+ I++MPIE + V+W L+AC E GE A+ + S+YV
Sbjct: 470 ARSGSIELAKNLIEEMPIEPNDVIWRTFLNACSHHKEFETGELVAKHLILQAGYNPSSYV 529
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+LSN+YA G W +R + +++K PGCSWIEL+ RVH F
Sbjct: 530 LLSNMYASNGMWKDVRRVRTMMKEKKIEKLPGCSWIELDGRVHEF 574
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 199/427 (46%), Gaps = 28/427 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+MP R VS+N+M+ GY K + + L M R K N T+++++
Sbjct: 142 GCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLVESAGELFDLMPRE--KRNLITWNSMI 199
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
AQ DG + + E + ++ Y IE+AK +FD + + +
Sbjct: 200 GGYAQ---RADGVNVASKLFDEMPEKDLISWNSMIGGYVKHGRIEDAKGLFDVMPRRDVV 256
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W++M+ GY + L+ A +F +MP +DVV + ++SG+ ++ E AL++F M +
Sbjct: 257 TWAIMIDGYGKLGLVHQAKTLFDQMPHRDVVAYNSMMSGFVQNRYHIE-ALEVFNHMEKE 315
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T V+ A A+LG + +H +++ F +G ALI+ Y C +
Sbjct: 316 SHLSPDETTLVIVLSAIAQLGRLTKAIDMHLYIVEKRFLLSGKLGVALIDMYSKCGSIQH 375
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSISYNSMIKGYAV 327
AMRV++ +E+ ++ N++I GL G E A I R + + I++ ++ +
Sbjct: 376 AMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVLNACSH 435
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V + FE M + I P ++ + M+ ++ E A L
Sbjct: 436 SGLVKEGLLCFELMRRKHKIE--------PRLQH----YGCMVDILARSGSIELAKNL-- 481
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRC 446
+ ++ I+ + +ACS + G+L+ HL+ + + + YV L +MY+
Sbjct: 482 -IEEMPIEPNDVIWRTFLNACSHHKEFETGELVAKHLILQAGYNPSSYV--LLSNMYASN 538
Query: 447 GSINDAQ 453
G D +
Sbjct: 539 GMWKDVR 545
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 6/210 (2%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-SNVKLNETTF 87
G+ G + A+ LFDQMP R VV++N+M+ G+ + E+L + + M + S++ +ETT
Sbjct: 266 GKLGLVHQAKTLFDQMPHRDVVAYNSMMSGFVQNRYHIEALEVFNHMEKESHLSPDETTL 325
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
+LS AQL L +H +++ + +G L+ Y+ C I+ A RVF+ +
Sbjct: 326 VIVLSAIAQLGRLTKAIDMHLYIVEKRFLLSGKLGVALIDMYSKCGSIQHAMRVFEGIES 385
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAKSVDGCEKALK 203
+ W+ M+ G L AFD+ +++ ++ D + + +++ + S ++ L
Sbjct: 386 KSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVLNACSHS-GLVKEGLL 444
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGA 233
F MR + P + ++ AR G+
Sbjct: 445 CFELMRRKHKIEPRLQHYGCMVDILARSGS 474
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 8/223 (3%)
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
SV P ++P WN++I + KAL L+ M + + + + S++ ACS LG
Sbjct: 49 SVSPGEIKDPFLWNAVIKSHSHGADPRKALLLFCLMLENGVLVDKFSMSLVLKACSRLGF 108
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
++G +H L+K+ S++++ L+ +Y +CG + A+ F + + ++ ++++G
Sbjct: 109 AKEGMQVHGFLIKSRTWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDG 168
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA-CVRAGLVNEGMKIFRSMKSYGVVP 532
Y GL A LF++M + N T+ ++ RA VN K+F M ++
Sbjct: 169 YVKCGLVESAGELFDLMPREK--RNLITWNSMIGGYAQRADGVNVASKLFDEMPEKDLIS 226
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ ++ + G + +A+ MP D V W ++
Sbjct: 227 ----WNSMIGGYVKHGRIEDAKGLFDVMP-RRDVVTWAIMIDG 264
>gi|413917533|gb|AFW57465.1| hypothetical protein ZEAMMB73_932577 [Zea mays]
Length = 677
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 198/649 (30%), Positives = 326/649 (50%), Gaps = 53/649 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV- 80
N +T GR G++ A+ LFD+MP R V+SW +L Y++ F + + M R N
Sbjct: 43 NALLTSYGRRGRIQDAQQLFDRMPRRDVISWTALLTAYAEGGDFASARLVFDDMPRRNAV 102
Query: 81 --------------------------KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG 114
N ++ I++ A+ L + + ++ +
Sbjct: 103 SWNALLSLYLGAGRPAAAHALFCKTPAKNAVSYGVIITGLARAGMLREAQAVYG---EMP 159
Query: 115 YECFEFVGS-GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
+ VGS ++ Y EI+ A RVFD + + + WS M+ G + +S+A +F
Sbjct: 160 PRLRDPVGSNAMILGYLRAGEIDMALRVFDTMAARDVISWSSMVDGLCKYGTVSEARRLF 219
Query: 174 IKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
MP+++VV WT ++ GY K + L LF MR G + N T V+ CA+
Sbjct: 220 EAMPERNVVSWTSMVRGYVK-CGMYREGLLLFLDMRREGVQV-NAITLSVVLDGCAQASL 277
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
EG VH L+ + GF D + G+LI Y A RV+ ++ + + NSLI G
Sbjct: 278 VGEGIQVHCLMTRMGFVTDIFLDGSLIIMYSRFGWMVDARRVFAFMKQKDIVSWNSLITG 337
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+ IEDA ++F + E ++IS+ S++ G+A G + +S LFE+MP
Sbjct: 338 YVQNNMIEDAHVLFKLMPERDAISWTSVVVGFANRGWMRESVELFEQMP----------- 386
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
++ + W ++IS ++ N H ++ + M + + FS L A + L
Sbjct: 387 ------VKDDIAWTAVISSFIANGNHVSVVRWFCQMSQEGCRPNTAAFSCLLSALASLAM 440
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L QG HA+ V + + V SLV MY++CG + +A FS I +P++ A ++++
Sbjct: 441 LNQGLQAHAYAVNMGWIFDSAVHASLVTMYAKCGRLAEAHRVFSCIRNPSLVAINSMISA 500
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVP 532
++ HGL +A+ LF M PN TF+G+L+AC RAGLV +G F SM+S YG+ P
Sbjct: 501 FAQHGLAEDALKLFNRMQYDGQRPNHVTFLGILTACARAGLVQQGYNYFESMRSVYGIQP 560
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+HYTC+V+LLG +G L EA E I MP + W ALLS+ N+++ + AAQ++
Sbjct: 561 NPDHYTCMVNLLGHAGFLDEALEMINSMPQKDYPDAWAALLSSSSLHSNLDLAKLAAQRL 620
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIR-KRLTHLEVKKDPGCSWI 640
+D +AY +L+N+++ G G + ++ +L+++ K+ PG S I
Sbjct: 621 LEIDPYDTTAYRVLTNMFSSAGLKGDEEMVKVAQLSNMASKR-PGYSLI 668
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 190/405 (46%), Gaps = 45/405 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++S + + + G + AR LF+ MP R VVSW +M+ GY K + E L L M R
Sbjct: 196 VISWSSMVDGLCKYGTVSEARRLFEAMPERNVVSWTSMVRGYVKCGMYREGLLLFLDMRR 255
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V++N T S +L CAQ + + +G Q+HCL+ + G+ F+ L+ Y+ + +
Sbjct: 256 EGVQVNAITLSVVLDGCAQASLVGEGIQVHCLMTRMGFVTDIFLDGSLIIMYSRFGWMVD 315
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA----- 192
A+RVF + + + + W+ ++ GYVQ N++ DA +F MP++D + WT ++ G+A
Sbjct: 316 ARRVFAFMKQKDIVSWNSLITGYVQNNMIEDAHVLFKLMPERDAISWTSVVVGFANRGWM 375
Query: 193 -KSVDGCEKA---------------------LKLFRWMRESGEN--MPNEYTFDSVIRAC 228
+SV+ E+ + + RW + + PN F ++ A
Sbjct: 376 RESVELFEQMPVKDDIAWTAVISSFIANGNHVSVVRWFCQMSQEGCRPNTAAFSCLLSAL 435
Query: 229 ARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASN 288
A L +G H + G+ FD ++ +L+ Y C A RV+ + NP L A N
Sbjct: 436 ASLAMLNQGLQAHAYAVNMGWIFDSAVHASLVTMYAKCGRLAEAHRVFSCIRNPSLVAIN 495
Query: 289 SLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
S+I+ G EDA +FNR+ N +++ ++ A G V FE M R
Sbjct: 496 SMISAFAQHGLAEDALKLFNRMQYDGQRPNHVTFLGILTACARAGLVQQGYNYFESM--R 553
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
S+ + + NP + M++ ++AL++ +M
Sbjct: 554 SVYGI----------QPNPDHYTCMVNLLGHAGFLDEALEMINSM 588
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 176/587 (29%), Positives = 299/587 (50%), Gaps = 84/587 (14%)
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGY-ECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
L +C + + ++ K+IH ++KSG +C
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQC-------------------------------- 36
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ L + +L Y +CNL+ DA +F +MP++D V W +++ Y ++ K L +F +M
Sbjct: 37 QPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQA-KLPNKTLSIFHYMF 95
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+ P+ + + ++++ACA L + GK VH + F D+ + +L++ Y C
Sbjct: 96 TTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKC--- 152
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
GL S+ R +F+ + S+S+ +M+ GYA G
Sbjct: 153 -----------------------GLPSIARS-----VFDSILVKTSVSWTAMLSGYARSG 184
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
D++ LF + P R++ S W ++ISG VQ+ +++ M
Sbjct: 185 LKDEAMELFLRTPVRNLYS-----------------WTALISGLVQSGYCIDGCYMFIEM 227
Query: 390 RKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
R+ +D S + AC+ L L G+ +H ++ + +ES +++ +LVDMY++C
Sbjct: 228 RREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSD 287
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
I A+ F+ + +V +WT+++ G + HG EA+ L++ M+ +I PN TFVG++ A
Sbjct: 288 ILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYA 347
Query: 509 CVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C AGLV++G K+F++M + Y + P+L+ +TC +DLL RSGHL+EAE+ IK MP + D
Sbjct: 348 CSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEP 407
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
W ALLSAC N E+G R A ++ L+ S YV+LSN+YA GKW + +RK +T
Sbjct: 408 TWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMT 467
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+EVK+ PG S I+L F + +P + I+ L+ L A +
Sbjct: 468 DMEVKRKPGYSSIDLGKESQVFHAGETCHPMKDEIFGLLKELDAEMR 514
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 170/328 (51%), Gaps = 12/328 (3%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-V 80
N + G+ L A LFD+MP R VSW ++L Y++ +++LS+ M ++ +
Sbjct: 41 NTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRL 100
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ + ++T+L CA L SL GKQ+H + S + + V S L+ YA C A+
Sbjct: 101 QPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARS 160
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS---VDG 197
VFD + + W+ ML GY + L +A ++F++ P +++ WT LISG +S +DG
Sbjct: 161 VFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDG 220
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
C +F MR G ++ + SV+ ACA L GK +HGL+I G+E I
Sbjct: 221 C----YMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISN 276
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA---- 313
AL++ Y C A V++R+ + + + S+I G GR ++A +++++ A
Sbjct: 277 ALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKP 336
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKM 341
N +++ +I + G V ++LF+ M
Sbjct: 337 NEVTFVGLIYACSHAGLVSKGRKLFKAM 364
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 121/267 (45%), Gaps = 11/267 (4%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS ++ R+G A LF + P+R + SW ++ G + + + M R
Sbjct: 171 VSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRRE 230
Query: 79 NVKL-NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V + + S+++ CA L L GKQIH LV+ SGYE F+ + L+ YA C +I
Sbjct: 231 GVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILA 290
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAK 193
A+ VF+ + + + W+ ++VG Q +A D++ +M K + V + LI YA
Sbjct: 291 ARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLI--YAC 348
Query: 194 SVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
S G K KLF+ M E P+ F + +R G E + L+ + D
Sbjct: 349 SHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAE---DLIKTMPHKPD 405
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRL 279
E AL+ + +R+ DRL
Sbjct: 406 EPTWAALLSACKHHGNTEMGVRIADRL 432
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + +N + + ++ ARN+F++M R VVSW +++ G ++ + E+L L
Sbjct: 269 ESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQ 328
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF- 133
M + +K NE TF ++ C+ + G+++ K+ E + S LF CF
Sbjct: 329 MVLAEIKPNEVTFVGLIYACSHAGLVSKGRKL----FKAMIEDYRISPSLQLF---TCFL 381
Query: 134 -------EIEEAKRVFDEL-HEDNELLWSLML 157
+ EA+ + + H+ +E W+ +L
Sbjct: 382 DLLSRSGHLNEAEDLIKTMPHKPDEPTWAALL 413
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 316/646 (48%), Gaps = 88/646 (13%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
L E +LS C + + KQIH ++K+G LF + E R
Sbjct: 27 LQEHPSLKLLSKCQSIRTF---KQIHAHIIKTGLH-------NTLFALSKLIEFSAVSRS 76
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
D +S A +F + + ++ +W +I G + S+ A
Sbjct: 77 GD----------------------ISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPA-LA 113
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
L F M SG PN YTF ++++CA+L + EGK +H ++K GF D I +LI
Sbjct: 114 LVFFVRMIYSGVE-PNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLIN 172
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSM 321
Y + A V+D+ + +LI G G ++ A +F+ + + +S+N+M
Sbjct: 173 MYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAM 232
Query: 322 IKGYAVYGQVDDSKRLFEKM------PHRS-IISL-------------NTMISVIPE--- 358
I GYA G+ ++ LFE M P+ S I+S+ N+M S I +
Sbjct: 233 IAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGL 292
Query: 359 ------------------------------MERNPVTWNSMISGYVQNNLHEKALQLYMT 388
+ER+ ++WN MI GY +++AL L+
Sbjct: 293 CSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFRE 352
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M ++ T TF + +C+ LG++ G+ +HA++ K + + TSL+D+Y++CG+
Sbjct: 353 MLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGN 412
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
I A+ F + ++A+W A++ G + HG +A LF M I PN TFVG+LSA
Sbjct: 413 IVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSA 472
Query: 509 CVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
C AGLV+ G + F SM + Y + P +HY C++DLLGR+G EAE +++M ++ D
Sbjct: 473 CKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGA 532
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
+WG+LL AC +E+GE A+++F L+ AYV+LSNIYA GKW IR RL
Sbjct: 533 IWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLN 592
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+KK PGC+ IE+++ VH F V D+ +P IY LE + L
Sbjct: 593 DRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQL 638
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 148/567 (26%), Positives = 251/567 (44%), Gaps = 37/567 (6%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R+G + A +LF+ + + WN+M+ G S +L M S V+ N TF
Sbjct: 75 RSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPF 134
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L CA+L S +GKQIH VLK G+ F+ + L+ YA E+ A+ VFD+ + +
Sbjct: 135 LLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRD 194
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ ++ ++ GY M A +F +MP KDVV W +I+GYA+ + ++AL LF MR
Sbjct: 195 AISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQ-MGRSKEALLLFEDMR 253
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
++ PNE T SV+ ACA+ A G + + G + + ALI+ Y C
Sbjct: 254 KANVP-PNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDL 312
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGY 325
A ++D + + + N +I G M ++A +F + E I++ S++
Sbjct: 313 QTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSC 372
Query: 326 AVYGQVDDSKRLFEKMP-----------------HRSIISLNTMISVIPEME-RNPVTWN 367
A G +D K + + + ++ V M+ ++ +WN
Sbjct: 373 AHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWN 432
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-- 425
+MI G + +KA +L+ M I+ TF + AC G + GQ + +V
Sbjct: 433 AMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQD 492
Query: 426 -KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEA 483
K +S Y ++D+ R G +A++ ++ P+ A W +L+ HG
Sbjct: 493 YKISPKSQHY--GCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELG 550
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF-----RSMKSYGVVPTLEHYT 538
L+ E + E + N +V + + AG ++ +I R MK T+E
Sbjct: 551 ELVAERLFELE-PDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDN 609
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELD 565
V + L +H E I M E+D
Sbjct: 610 VVHEFL-VGDKVHPQSEDIYRMLEEVD 635
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 140/336 (41%), Gaps = 48/336 (14%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N I + G L TAR LFD M R V+SWN M+ GY+ + E+L+L M S V
Sbjct: 299 VNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGV 358
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ E TF +IL CA L ++ GK IH + K+ + + L+ YA C I A++
Sbjct: 359 EPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQ 418
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VFD + + W+ M+ G AF++F KM S DG E
Sbjct: 419 VFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKM-----------------SSDGIE- 460
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG---- 256
PNE TF ++ AC G G+ +++ D I
Sbjct: 461 ---------------PNEITFVGILSACKHAGLVDLGQQFFSSMVQ-----DYKISPKSQ 500
Query: 257 --GALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRLTE- 312
G +I+ F+ A + +E P SL+ GR+E EL+ RL E
Sbjct: 501 HYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFEL 560
Query: 313 --ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
N +Y + YA G+ DD R+ ++ R +
Sbjct: 561 EPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGM 596
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 195/681 (28%), Positives = 324/681 (47%), Gaps = 93/681 (13%)
Query: 38 RNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQL 97
R +FD M R VV+WNTM+ Y K + E+ + TM R ++ +F + ++
Sbjct: 172 RRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRM 231
Query: 98 NSLIDGKQIHCLVLKSGYECFE--FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
N + ++ LV+K G + + FV S +F YA ++ A+ +FD
Sbjct: 232 NDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFD------------ 279
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGEN 214
C L +++ VW +I GY + + C +A+ LF + ES +
Sbjct: 280 -------CCL------------ERNTEVWNTMIGGYVQ--NNCPIEAIDLFVQVMESEQF 318
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
++ TF S + A ++L G+ +H ++K I A+I Y C + + +
Sbjct: 319 XLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFK 378
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDA-ELIFN-----------RLTEANSISYN--- 319
V+ + + N++++ + G ++ L+F LT S++ N
Sbjct: 379 VFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRS 438
Query: 320 -----------------------SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+I YA G + +++LFEK
Sbjct: 439 QEIGKQAHAYLIRHGIQFEGMDGYLIDMYAKSGLITTAQQLFEKNS-------------- 484
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
+R+ TWN+MI+GY QN L E+ ++ M + + T + + AC+ +G++
Sbjct: 485 -XYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGL 543
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+ +H ++ NV+VGT+L+DMYS+ G+I A+ F+ N +T ++ Y
Sbjct: 544 GKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQ 603
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLE 535
HG+G A+ LF ML I P++ TFV +LSAC AGLV+EG++IF+SM + Y + P+ E
Sbjct: 604 HGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSE 663
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV-VWGALLSACWFWMNMEVGERAAQKMFG 594
HY CV D+LGR G + EA EF+K + E + +WG+LL AC E+G+ A K+
Sbjct: 664 HYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLE 723
Query: 595 LDK-KPISAY-VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
++K ++ Y V+LSNIYA G W +RK + + K+ GCSW+E+ V+ F
Sbjct: 724 MEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSR 783
Query: 653 DRNNPNCNVIYATLEHLTANL 673
D +P C IY LE L +
Sbjct: 784 DHKHPQCAEIYQMLEKLAMEM 804
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 165/604 (27%), Positives = 274/604 (45%), Gaps = 58/604 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNETTFS 88
R G A +LFD +P T V WNT++ G+ ++L + M S + K + TFS
Sbjct: 49 RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF-EIEEAKRVFDELHE 147
+ L CAQ SL GK +HC VL+S + V + LL Y+ C E+ +D
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYD---- 164
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
+ C+L+ FD M K++VV W +IS Y K+ E A K+FR
Sbjct: 165 ------------FNNCDLVRRVFDT---MRKRNVVAWNTMISWYVKTERLIE-AFKMFRT 208
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF--DESIGGALIEFYCG 265
M G P +F +V A R+ + V++GL++K G ++ D + + I Y
Sbjct: 209 MMRMGIR-PTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAE 267
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLIS-----------MGRIEDAELIFNRLTEAN 314
D A ++D N++I G + + +E + + +T +
Sbjct: 268 LGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLS 327
Query: 315 SISYNSMIK----GYAVYGQVDDSKRLFEKMPHRSII-------SLNTMISVIPEM-ERN 362
+++ S ++ G ++ + S + + + +II S+ T V M ER+
Sbjct: 328 ALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERD 387
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
VTWN+M+S +VQN L ++ L L M+K T + L S L S + G+ HA
Sbjct: 388 VVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHA 447
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF--SSISSPNVAAWTALMNGYSHHGLG 480
+L++ + G L+DMY++ G I AQ F +S + A W A++ GY+ +GL
Sbjct: 448 YLIRHGIQFEGMDGY-LIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLS 506
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
E +F M+EQ++ PNA T +L AC G + G +I + + T +
Sbjct: 507 EEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTAL 566
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA---QKMFGLDK 597
+D+ +SG + AE + +E ++V + ++ + + +GERA M G
Sbjct: 567 LDMYSKSGAITYAENVFAE-TLEKNSVTYTTMILS---YGQHGMGERALSLFHAMLGSGI 622
Query: 598 KPIS 601
KP S
Sbjct: 623 KPDS 626
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 162/390 (41%), Gaps = 84/390 (21%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
Y +S T++ +V N I R G + T+ +F M R VV+WNTM+ + +
Sbjct: 347 YILKSSTILQ----VVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNG 402
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS 123
DE L LV M + ++ T + +LS+ + L S GKQ H +++ G + FE +
Sbjct: 403 LDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQ-FEGMDG 461
Query: 124 GLLFFYANCFEIEEAKRVFDE--LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
L+ YA I A+++F++ ++ +E W+ M+ GY Q L + F VF KM +++V
Sbjct: 462 YLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNV 521
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
PN T S++ AC +G GK +H
Sbjct: 522 ---------------------------------RPNAVTLASILPACNPMGTIGLGKQIH 548
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
G I+C + +G AL++ Y G I
Sbjct: 549 GFAIRCFLNQNVFVGTALLDMYS-------------------------------KSGAIT 577
Query: 302 DAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
AE +F E NS++Y +MI Y +G + + LF M I +
Sbjct: 578 YAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGI-------------KP 624
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
+ VT+ +++S L ++ L+++ +M +
Sbjct: 625 DSVTFVAILSACSYAGLVDEGLRIFQSMER 654
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 166/385 (43%), Gaps = 67/385 (17%)
Query: 29 GRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
++G + TA+ LF++ R +WN M+ GY++ +E ++ M NV+ N T
Sbjct: 468 AKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVT 527
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
++IL C + ++ GKQIH ++ FVG+ LL Y+ I A+ VF E
Sbjct: 528 LASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETL 587
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISG--YAKSVDGCEK 200
E N + ++ M++ Y Q + A +F M K D V + ++S YA VD +
Sbjct: 588 EKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVD---E 644
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
L++F+ M + P+ + V R+G E +EF + +G
Sbjct: 645 GLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXE-----------AYEFVKGLGEEGN 693
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS--- 317
F R++ L C I+G +G++ + N+L E S
Sbjct: 694 TF-----------RIWGSLLGAC------RIHGEFELGKV-----VANKLLEMEKGSXLT 731
Query: 318 -YNSMIKG-YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV- 374
Y+ ++ YA G D+ R+ ++M + + M+ +W ++G+V
Sbjct: 732 GYHVLLSNIYAAEGNWDNVDRVRKEMRQKGL------------MKEAGCSWVE-VAGHVN 778
Query: 375 ----QNNLHEKALQLYMTMRKLAID 395
+++ H + ++Y + KLA++
Sbjct: 779 CFMSRDHKHPQCAEIYQMLEKLAME 803
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 326/641 (50%), Gaps = 67/641 (10%)
Query: 47 RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
R++ +WN M+ + F ++L++ S+M S V N T+ +L CA L S+ G +
Sbjct: 9 RSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTML 68
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H VLK G++ FV + L+ Y+ C + A++V
Sbjct: 69 HGHVLKLGFQADTFVQTALVDMYSKCSHVASARQV------------------------- 103
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
F +MP++ VV W ++S Y++ ++AL L + M G P TF S++
Sbjct: 104 ------FDEMPQRSVVSWNAMVSAYSRR-SSMDQALSLLKEMWVLGFE-PTASTFVSILS 155
Query: 227 ACARLGAF---CEGKVVHGLLIKCGFEFDE-SIGGALIEFYCGCEAFDGAMRVYDRLENP 282
+ L +F GK +H LIK G + E S+ +L+ Y D A +V+D ++
Sbjct: 156 GYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEK 215
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
+ + ++I G + +G +A +F ++ + S+ + ++ + G + L
Sbjct: 216 SIISWTTMIGGYVKIGHAVEAYGLFYQM-QHQSVGIDFVVFLNLISGCIQVRDLLLASSV 274
Query: 343 HRSIISL---------NTMISVIPE--------------MERNPVTWNSMISGYVQNNLH 379
H ++ N +I++ + +E++ ++W SMI+GYV
Sbjct: 275 HSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHP 334
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
+AL L+ M + I +T + + AC+ LGSL GQ + ++ ES+ V TSL
Sbjct: 335 GEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSL 394
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM-LEQDIVPN 498
+ MYS+CGSI A+ F ++ ++ WT+++N Y+ HG+G+EA+ LF M + I+P+
Sbjct: 395 IHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPD 454
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
A + V AC +GLV EG+K F+SM K +G+ PT+EH TC++DLLGR G L A I
Sbjct: 455 AIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAI 514
Query: 558 KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS--AYVILSNIYAVLGK 615
+ MP ++ A VWG LLSAC N+E+GE A ++ LD P S +YV+++N+Y LGK
Sbjct: 515 QGMPPDVQAQVWGPLLSACRIHGNVELGELATVRL--LDSSPGSSGSYVLMANLYTSLGK 572
Query: 616 WGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
W + +R + + K+ G S +E+ H F+V +++
Sbjct: 573 WKEAHMMRNSMDGKGLVKESGWSQVEVTDTYHTFAVGNQSQ 613
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 210/485 (43%), Gaps = 82/485 (16%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
+ +AR +FD+MP R+VVSWN M+ YS+ + D++LSL+ M + +TF +ILS
Sbjct: 96 HVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILS 155
Query: 93 VCAQLNSL---IDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEAKRVFDELHED 148
+ L+S + GK IHC ++K G E + + L+ Y ++EA++VFD + E
Sbjct: 156 GYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEK 215
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAKSVDGCEKALKL 204
+ + W+ M+ GYV+ +A+ +F +M + D VV+ LISG
Sbjct: 216 SIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISG-------------- 261
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
C ++ VH L++KCG + + LI Y
Sbjct: 262 -----------------------CIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYA 298
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN---------- 314
C A R++D + + + S+I G + +G +A +F R+ +
Sbjct: 299 KCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLAT 358
Query: 315 ---------SISYNSMIKGYAVYGQVDDSKRLFEKMPHR-----SIISLNTMISVIPEME 360
S+S I+ Y ++ +++ + H SI+ + + +
Sbjct: 359 VVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVT--D 416
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKL-AIDRTRSTFSVLFHACSCLGSLQQGQL 419
++ W SMI+ Y + + +A+ L+ M I ++ +F ACS G +++G
Sbjct: 417 KDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLK 476
Query: 420 LHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA--WTALMNG 473
+ K TP V T L+D+ R G ++ A + + P+V A W L++
Sbjct: 477 YFKSMQKDFGITP---TVEHCTCLIDLLGRVGQLDLALNAIQGM-PPDVQAQVWGPLLSA 532
Query: 474 YSHHG 478
HG
Sbjct: 533 CRIHG 537
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 84/156 (53%)
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
+S+ P R+ TWN MI N + L +Y +M + T+ +L AC+ L
Sbjct: 1 MSLRPSFRRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLP 60
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
S+Q G +LH H++K F+++ +V T+LVDMYS+C + A+ F + +V +W A+++
Sbjct: 61 SIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVS 120
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
YS +A+ L + M P A+TFV +LS
Sbjct: 121 AYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSG 156
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 109/216 (50%), Gaps = 6/216 (2%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N IT + G L +AR +FD + ++++SW +M+ GY E+L L M R++++
Sbjct: 291 NLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIR 350
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
N T +T++S CA L SL G++I + +G E + V + L+ Y+ C I +A+ V
Sbjct: 351 PNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREV 410
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK-----KDVVVWTKLISGYAKSVD 196
F+ + + + +W+ M+ Y + ++A +F KM D +V+T + + S
Sbjct: 411 FERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHS-G 469
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
E+ LK F+ M++ P +I R+G
Sbjct: 470 LVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVG 505
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 176/559 (31%), Positives = 287/559 (51%), Gaps = 62/559 (11%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
YV+C A +F MP+++VV W ++ GY S E LKLF+ M SGE+ PNE+
Sbjct: 79 YVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFE-VLKLFKSMFFSGESRPNEF 137
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
V ++C+ G EGK HG +K G E + L+ Y C A+RV D L
Sbjct: 138 VATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDL 197
Query: 280 ENPCLNASNSLINGLISMGRIEDA----------ELIFNRLTEANSISY----------- 318
L+ +S ++G + G ++ + ++N LT +S+
Sbjct: 198 PYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLAL 257
Query: 319 ------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
++I Y G+V ++R+F+ H I LNT I
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDT-HAQNIFLNTTI------- 309
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
+ Y Q+ E+AL L+ M + TF++L ++ + L L+QG LL
Sbjct: 310 ---------MDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLL 360
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H ++K+ + ++V VG +LV+MY++ GSI DA+ +FS ++ ++ W +++G SHHGLG
Sbjct: 361 HGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLG 420
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS-MKSYGVVPTLEHYTC 539
EA+ F+ M+ +PN TF+GVL AC G V +G+ F MK + V P ++HYTC
Sbjct: 421 REALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTC 480
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
+V LL ++G +AE+F++ PIE D V W LL+AC+ N +G++ A+ + ++K P
Sbjct: 481 IVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAE--YAIEKYP 538
Query: 600 ISA--YVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+ YV+LSNI+A +W +R + + VKK+PG SWI + ++ H F ED +P
Sbjct: 539 NDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHP 598
Query: 658 NCNVIYATLEHLTANLNSV 676
+IYA ++ + + + +
Sbjct: 599 EITLIYAKVKEVMSKIKPL 617
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 211/467 (45%), Gaps = 60/467 (12%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-ESLSLVSTMHRSN-VKLNETTFSTI 90
+ V AR LFD MP R VVSW M+ GY + FD E L L +M S + NE + +
Sbjct: 84 ETVRARKLFDLMPERNVVSWCAMMKGYQN-SGFDFEVLKLFKSMFFSGESRPNEFVATVV 142
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
C+ + +GKQ H LK G EFV + L++ Y+ C EA RV D+L +
Sbjct: 143 FKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDL 202
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
++S L GY++C + DV K +D VW L Y S L+LF +R+
Sbjct: 203 SVFSSALSGYLECGAFKEGLDVLRKTANED-FVWNNLT--YLSS-------LRLFSNLRD 252
Query: 211 SG-----ENMPNEYTFDSVIRACARL---GAFCEGKVVHGLLIKCGFEFDES------IG 256
+ + F++ + AC L C GKV++ + FD++ +
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKC-GKVLYAQRV-----FDDTHAQNIFLN 306
Query: 257 GALIEFYCGCEAFDGAMRVYDRLEN----PCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+++ Y ++F+ A+ ++ +++ P L+N + + ++ +L+ + +
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLK 366
Query: 313 ANSISY----NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNS 368
+ ++ N+++ YA G ++D+++ F M R I VTWN+
Sbjct: 367 SGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDI-----------------VTWNT 409
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT- 427
MISG + L +AL+ + M R TF + ACS +G ++QG L+K
Sbjct: 410 MISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKF 469
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWTALMNG 473
+ ++ T +V + S+ G DA+ + +V AW L+N
Sbjct: 470 DVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 33/209 (15%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G+++ A+ +FD + + T++ Y + F+E+L+L S M V NE TF+
Sbjct: 283 GKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFA 342
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L+ A+L+ L G +H LVLKSGY VG+ L+ YA IE+A++ F +
Sbjct: 343 ILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR 402
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ M+ G L +A + F +M +F
Sbjct: 403 DIVTWNTMISGCSHHGLGREALEAFDRM---------------------------IF--- 432
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEG 237
+GE +PN TF V++AC+ +G +G
Sbjct: 433 --TGE-IPNRITFIGVLQACSHIGFVEQG 458
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 107/242 (44%), Gaps = 18/242 (7%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
NS+I Y + +++LF+ MP ERN V+W +M+ GY +
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMP-----------------ERNVVSWCAMMKGYQNSGF 115
Query: 379 HEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+ L+L+ +M R +V+F +CS G +++G+ H +K S+ +V
Sbjct: 116 DFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRN 175
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+LV MYS C +A + +++ +++ ++GY G E + + +D V
Sbjct: 176 TLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVW 235
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
N T++ L +N +++ M +G +E ++++ G+ G + A+
Sbjct: 236 NNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVF 295
Query: 558 KD 559
D
Sbjct: 296 DD 297
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 8/144 (5%)
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES---NVYVGTSLVDMYSRCGS 448
IDR + L C+ L+ G+ +HAHL+ T S + Y SL+++Y +C
Sbjct: 29 FPIDR----LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRE 84
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM-LEQDIVPNAATFVGVLS 507
A+ F + NV +W A+M GY + G E + LF+ M + PN V
Sbjct: 85 TVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFK 144
Query: 508 ACVRAGLVNEGMKIFRSMKSYGVV 531
+C +G + EG + YG++
Sbjct: 145 SCSNSGRIEEGKQFHGCFLKYGLI 168
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++ N + ++G + AR F M R +V+WNTM+ G S E+L M
Sbjct: 373 VMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIF 432
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDG 103
+ N TF +L C+ + + G
Sbjct: 433 TGEIPNRITFIGVLQACSHIGFVEQG 458
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 192/625 (30%), Positives = 315/625 (50%), Gaps = 96/625 (15%)
Query: 95 AQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
A+ L G+++H V+ +G F +G+GL+ YA C I +A+RVF
Sbjct: 44 AEQVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF----------- 92
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMRESG 212
C +M +KD V W +I+G + +GC +A++ ++ MR
Sbjct: 93 ---------CFMM-----------EKDSVSWNSMITGLDQ--NGCFIEAVERYQSMRRH- 129
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
E +P +T S + +CA L G+ +HG +K G + + S+ AL+ Y +
Sbjct: 130 EILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNEC 189
Query: 273 MRVYDRLENPCLNASNSLINGLISMGR-IEDAELIF----------NRLT---------- 311
+++ + + NS+I L S R + +A F NR+T
Sbjct: 190 RKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSS 249
Query: 312 -------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
+ + N++I Y G++D +++F +M R
Sbjct: 250 LSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSER-------- 301
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
R+ VTWNSMISGY+ N L KAL L M + ++ + A + +
Sbjct: 302 --------RDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVA 353
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+L++G +HA V+ ES+V VG++LVDMYS+CG ++ A F+++ N +W ++++
Sbjct: 354 TLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMIS 413
Query: 473 GYSHHGLGSEAVLLFEIM-LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGV 530
GY+ HG G EA+ LF M L+ P+ TFVGVLSAC AGL+ EG K F SM SYG+
Sbjct: 414 GYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGL 473
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF--WMNMEVGERA 588
P +EH++C+ DLLGR+G L + E+FI MP++ + ++W +L AC E+G++A
Sbjct: 474 APRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKA 533
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A+ +F L+ + YV+L N+YA G+W + RK++ +VKK+ G SW+ + VH
Sbjct: 534 AEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHM 593
Query: 649 FSVEDRNNPNCNVIYATLEHLTANL 673
F D+++P+ +VIY L+ L +
Sbjct: 594 FVAGDKSHPDTDVIYKKLKELNRKM 618
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 126/549 (22%), Positives = 214/549 (38%), Gaps = 105/549 (19%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +F M + VSWN+M+ G + F E++ +M R + T + L
Sbjct: 83 GSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSL 142
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S CA L G+QIH LK G + V + L+ YA + E +++F
Sbjct: 143 SSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS-------- 194
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
MP+ D V W +I A S +A+ F +
Sbjct: 195 -----------------------SMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRA 231
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G+ + N TF SV+ A + L GK +HGL +K + + ALI Y C DG
Sbjct: 232 GQKL-NRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDG 290
Query: 272 AMRVYDRLENPCLNAS-NSLING----------------LISMGRIEDAELIFNRLT--- 311
+++ R+ + + NS+I+G ++ G+ D+ + L+
Sbjct: 291 CEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFA 350
Query: 312 --------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
E++ + ++++ Y+ G++D + R F MP
Sbjct: 351 SVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP--------- 401
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR-KLAIDRTRSTFSVLFHACSC 410
RN +WNSMISGY ++ E+AL+L+ M+ TF + ACS
Sbjct: 402 --------VRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSH 453
Query: 411 LGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAW 467
G L++G H + + + + + D+ R G ++ + + PNV W
Sbjct: 454 AGLLEEG-FKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIW 512
Query: 468 TALM------NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
++ NG A +LF++ E NA +V + + G + +K
Sbjct: 513 RTVLGACCRANGRKAELGKKAAEMLFQLEPE-----NAVNYVLLGNMYAAGGRWEDLVKA 567
Query: 522 FRSMKSYGV 530
+ MK V
Sbjct: 568 RKKMKDADV 576
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 136/322 (42%), Gaps = 64/322 (19%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK-FDESLSLVSTMHRSN 79
+N +T G L R +F MP VSWN+++ + + E+++ R+
Sbjct: 173 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAG 232
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
KLN TFS++LS + L+ GKQIH L LK + L+ Y C E++ +
Sbjct: 233 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCE 292
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
++F + E ++D V W +ISGY + +
Sbjct: 293 KIFSRMSE------------------------------RRDDVTWNSMISGYIHN-ELLA 321
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
KAL L +M ++G+ + + + + +V+ A A + G VH ++ E D +G AL
Sbjct: 322 KALDLVWFMLQTGQRL-DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSAL 380
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYN 319
++ Y C D A+R FN + NS S+N
Sbjct: 381 VDMYSKCGRLDYALR-------------------------------FFNTMPVRNSYSWN 409
Query: 320 SMIKGYAVYGQVDDSKRLFEKM 341
SMI GYA +GQ +++ +LF M
Sbjct: 410 SMISGYARHGQGEEALKLFANM 431
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF-----HACSCLGSLQQGQLLHAHLVK 426
G V+ E+A +L+M M + ID + ++ +L ++ + L++G+ +H H++
Sbjct: 3 GLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVIT 61
Query: 427 TPF-ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
T + V +G LV+MY++CGSI DA+ F + + +W +++ G +G EAV
Sbjct: 62 TGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVE 121
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545
++ M +I+P + T + LS+C G +I G+ + ++ L
Sbjct: 122 RYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYA 181
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+G+L+E + MP E D V W +++ A
Sbjct: 182 ETGYLNECRKIFSSMP-EHDQVSWNSIIGA 210
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 19 VSTNKAITEC-GRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
+T A+ C G+ G++ +F +M R V+WN+M+ GY ++L LV M
Sbjct: 272 ATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFML 331
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
++ +L+ ++T+LS A + +L G ++H +++ E VGS L+ Y+ C ++
Sbjct: 332 QTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLD 391
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A R F+ + N W+ M+ SGYA+
Sbjct: 392 YALRFFNTMPVRNSYSWNSMI-------------------------------SGYARHGQ 420
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
G E+ALKLF M+ G+ P+ TF V+ AC+ G EG
Sbjct: 421 G-EEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 460
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 37/166 (22%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNE 84
++CGR L A F+ MP+R SWN+M+ GY++ + +E+L L + M +
Sbjct: 385 SKCGR---LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDH 441
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
TF +LS C+ H +L+ G++ FE + Y IE + D
Sbjct: 442 VTFVGVLSACS-----------HAGLLEEGFKHFESMSDS----YGLAPRIEHFSCMADL 486
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFI-KMP-KKDVVVWTKLI 188
L EL D + FI KMP K +V++W ++
Sbjct: 487 LGRAGEL----------------DKLEDFIDKMPVKPNVLIWRTVL 516
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 180/598 (30%), Positives = 300/598 (50%), Gaps = 55/598 (9%)
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L CA LN + KQ+H +++ + L+ + C + A RVF+++ E N
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
L + ++ + Q + AF VF +M + LF
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQR-----------------------FGLF----- 114
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY--CGCEA 268
+ +T+ +++AC+ K++H + K G D + ALI+ Y CG
Sbjct: 115 -----ADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLG 169
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
AM++++++ + NS++ GL+ G + DA +F+ + + + IS+N+M+ GYA
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARC 229
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMI----------------SVIPEMERNPVTWNSMISG 372
++ + LFEKMP R+ +S +TM+ +P +N VTW +I+G
Sbjct: 230 REMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG 289
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
Y + L ++A +L M + + + AC+ G L G +H+ L ++ SN
Sbjct: 290 YAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN 349
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
YV +L+DMY++CG++ A F+ I ++ +W +++G HG G EA+ LF M
Sbjct: 350 AYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR 409
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
+ I P+ TF+ VL +C AGL++EG+ F SM K Y +VP +EHY C+VDLLGR G L
Sbjct: 410 EGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLK 469
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
EA + ++ MP+E + V+WGALL AC +++ + + LD Y +LSNIYA
Sbjct: 470 EAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYA 529
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
W DIR ++ + V+K G S +EL +H F+V D+++P + IY L L
Sbjct: 530 AAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 160/378 (42%), Gaps = 78/378 (20%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYS 60
MKL+ S E VS N + + G+L AR LFD+MP R ++SWNTML GY+
Sbjct: 174 MKLFEKMS------ERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYA 227
Query: 61 KWAKFDESLSLVSTMHRSNV-----------------------------KLNETTFSTIL 91
+ + ++ L M N N T++ I+
Sbjct: 228 RCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIII 287
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE---IEEAKRVFDELHE- 147
+ A+ L + ++ ++ SG +F + ++ A C E + R+ L
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASG---LKFDAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 148 ---DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
N + + +L Y +C + AFDVF +PKKD+V W ++ G G E A++L
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKE-AIEL 403
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F MR G P++ TF +V+ +C G EG I+++
Sbjct: 404 FSRMRREGIR-PDKVTFIAVLCSCNHAGLIDEG----------------------IDYFY 440
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-EANSISYNSMIK 323
E +VYD + P + L++ L +GR+++A + + E N + + +++
Sbjct: 441 SME------KVYDLV--PQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLG 492
Query: 324 GYAVYGQVDDSKRLFEKM 341
++ +VD +K + + +
Sbjct: 493 ACRMHNEVDIAKEVLDNL 510
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 272/512 (53%), Gaps = 26/512 (5%)
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
+F + +K+VV + +I Y + E AL +F+ M N P+ YTF V++AC+ L
Sbjct: 93 IFDRSLEKNVVFFNVMIRSYVNNNLYVE-ALSIFQVMLSCAFN-PDHYTFPCVLKACSGL 150
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
G VH ++K G + + IG AL+ Y C A +V D++ + + NS++
Sbjct: 151 DNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMV 210
Query: 292 NGLISMGRIEDAELI------FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
G G+ +DA I N +A +++ S + Y V +FE+M ++
Sbjct: 211 AGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKN 270
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
+IS WN MI+ YV N++ +A+ L++ M + + T + L
Sbjct: 271 LIS-----------------WNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
AC L +L G+ LH ++ K + N+ + +L+DMY++CG + +A+ F + +V
Sbjct: 314 PACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVV 373
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
+WT++M+ Y G G +AV LF ML+ P++ FV VLSAC GL+++G FR M
Sbjct: 374 SWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMM 433
Query: 526 -KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
+ YG+VP +EH+ C+VDL GR+G + EA FIK MP+E + VWGALLSAC M++
Sbjct: 434 TEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDI 493
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
G AA +F L K YV+LSNIYA G W M++R + + +KK PG S +ELN
Sbjct: 494 GLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNG 553
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+VH F D+ +P IY L+ L + +
Sbjct: 554 QVHTFLAGDQYHPQAKNIYGELDVLVGKMKEL 585
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/487 (22%), Positives = 212/487 (43%), Gaps = 66/487 (13%)
Query: 8 SQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDE 67
++ L TL + +A + G+ AR +FD+ + VV +N M+ Y + E
Sbjct: 64 NEHLRIDPTLAIKLMRAYSA---QGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVE 120
Query: 68 SLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLF 127
+LS+ M + TF +L C+ L++L G Q+H ++K G + F+G+ L+
Sbjct: 121 ALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVA 180
Query: 128 FYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV--------------- 172
Y C + EA++V D++ + + W+ M+ GY Q DA ++
Sbjct: 181 MYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGT 240
Query: 173 ----------------------FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
F +M KK+++ W +I+ Y + E A+ LF M E
Sbjct: 241 MASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNE-AVSLFLQMEE 299
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G P+ T S++ AC L A G+ +H + K + + + AL++ Y C +
Sbjct: 300 CGMK-PDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLE 358
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYA 326
A V+D++ + + S+++ G+ DA +F ++ ++ +SI++ S++ +
Sbjct: 359 EARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACS 418
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G +D + F M + ++P +E + M+ + + E+A Y
Sbjct: 419 HTGLLDQGRHYFRMMTEQ--------YGIVPRIEH----FACMVDLFGRAGEVEEA---Y 463
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV--KTPFESNVYVGTSLVDMYS 444
++++ ++ + L AC + G L+ A L+ P +S YV L ++Y+
Sbjct: 464 SFIKQMPMEPNERVWGALLSACRVHSKMDIG-LVAADLLFQLAPKQSGYYV--LLSNIYA 520
Query: 445 RCGSIND 451
+ G D
Sbjct: 521 KAGMWKD 527
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 182/599 (30%), Positives = 295/599 (49%), Gaps = 86/599 (14%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+++ + LN L G Q+H +L G + VGS ++ FYA+ +I+ + VF+ +
Sbjct: 72 SYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGI 131
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
E + LL++ M+ Y + G+A E+ + +
Sbjct: 132 GEPSSLLFNSMIRAYAR--------------------------YGFA------ERTVATY 159
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M G + +TF V+++ L + GK VHGL+++ G +FD + +LI Y
Sbjct: 160 FSMHSWGFTG-DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGK 218
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
C G I DA +F+ +T + S+N+++ GY
Sbjct: 219 C-------------------------------GEINDAGKVFDNMTIRDVSSWNALLAGY 247
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
G +D + +FE+MP R+I+S W +MISGY Q+ L ++AL L
Sbjct: 248 TKSGCIDAALAIFERMPWRNIVS-----------------WTTMISGYSQSGLAQQALSL 290
Query: 386 YMTMRK--LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+ M K + T + AC+ L +L++G+ +H + SN V +L MY
Sbjct: 291 FDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMY 350
Query: 444 SRCGSINDAQASFSSIS--SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
++CGS+ DA+ F ++ N+ AW ++ Y+ +G G +AV F M++ I P+ T
Sbjct: 351 AKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDIT 410
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
F G+LS C +GLV+ G+K F M + Y + P +EHY CV DLLGR+G L EA + + +M
Sbjct: 411 FTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEM 470
Query: 561 PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKM 620
P+ +WG+LL+AC N+E+ E AA+K+F L+ + YV+LSN+YA G+W +
Sbjct: 471 PMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVD 530
Query: 621 DIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSVVLF 679
+R + KK PGCSWIE+N + H F D ++P IY LE L + + F
Sbjct: 531 KLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYF 589
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 173/355 (48%), Gaps = 17/355 (4%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
Q T +V + K + +G + ++ ++F+ + + + +N+M+ Y+++ + +++
Sbjct: 102 QPTALVGS-KMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYF 160
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+MH + TF +L +L S+ GK +H L+L+ G + +V + L+ Y C
Sbjct: 161 SMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCG 220
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
EI +A +VFD + + W+ +L GY + + A +F +MP +++V WT +ISGY++
Sbjct: 221 EINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQ 280
Query: 194 SVDGCEKALKLFRWM-RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
S ++AL LF M +E PN T SV+ ACA+L G+ +H L + G +
Sbjct: 281 S-GLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSN 339
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLN--ASNSLINGLISMGRIEDAELIFNRL 310
S+ AL Y C + A +D+L N A N++I S G A F +
Sbjct: 340 ASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREM 399
Query: 311 TEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
+A + I++ ++ G + G VD + F M +T S+ P +E
Sbjct: 400 IQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHM--------STTYSINPRVEH 446
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 206/675 (30%), Positives = 329/675 (48%), Gaps = 79/675 (11%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMP---IRTVVSWNTMLCGYSKWAKFDESLSL 71
E+ + N + R+G L A +FD++ I V+SWN+++ + K + +L L
Sbjct: 181 ESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDL 240
Query: 72 VSTM------HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGL 125
S M +N + + + IL CA L +L K+IH +++G FV + L
Sbjct: 241 FSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNAL 300
Query: 126 LFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185
+ YA +C M DA +VF M KDVV W
Sbjct: 301 IDTYA-------------------------------KCGSMKDAVNVFNVMEFKDVVSWN 329
Query: 186 KLISGYAKSVDGCEKALKLFRWMRESGENMP-NEYTFDSVIRACARLGAFCEGKVVHGLL 244
+++GY +S A +LF+ MR+ EN+P + T+ +VI A+ G E +
Sbjct: 330 AMVTGYTQS-GKFGAAFELFKNMRK--ENIPLDVITWSAVIAGYAQRGYGQEALDTFQQM 386
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
I G E + +L+ A M + + SL L+S+ +
Sbjct: 387 ILYGSEPNSVTIISLLSACASLGALSQGMETH----------AYSLKKCLLSLDNDFGGD 436
Query: 305 LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV 364
L + +N++I Y+ RS + T+ + IP ERN V
Sbjct: 437 GDGEDL-----VVHNALIDMYS---------------KCRSFKAARTIFNSIPRRERNVV 476
Query: 365 TWNSMISGYVQNNLHEKALQLY--MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
TW MI GY Q AL+L+ M + A+ T S + AC+ L SL+ G+ +HA
Sbjct: 477 TWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHA 536
Query: 423 HLVKT-PFESNVY-VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
++ + +ES+VY V L+DMYS+CG ++ A+ F S+ N +WT++M+GY HG G
Sbjct: 537 YVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRG 596
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTC 539
EA+ +F+ M + VP+ +F+ +L AC +G+V++G+ F M+S YGV+ + +HY C
Sbjct: 597 KEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYAC 656
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
V+DLL RSG L +A + I++MP+E A +W ALLSAC N+E+ E A K+ + +
Sbjct: 657 VIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAEN 716
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNC 659
+Y ++SNIYA +W IR+ + +KK PGCSW++ +F V DR++P
Sbjct: 717 DGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLS 776
Query: 660 NVIYATLEHLTANLN 674
IY+ LE L +
Sbjct: 777 PEIYSLLERLIGRIK 791
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 136/589 (23%), Positives = 251/589 (42%), Gaps = 96/589 (16%)
Query: 8 SQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDE 67
S + ++ ++L + CG A ++ +++ V WN ++ + + + D
Sbjct: 76 SHSYVSPKSLGTGVVASYLACGATSD---ALSVLERVVPSPAVWWNLLVRAHIEEGRLDR 132
Query: 68 SLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLF 127
++ + M R+ K + T L C +L S G H L+ +G+E FV + L+
Sbjct: 133 AIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVA 192
Query: 128 FYANCFEIEEAKRVFDELHE---DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
Y+ +E+A VFDE+ D+ + W+ ++ +V+ + A D+F +M
Sbjct: 193 MYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEM-------- 244
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
T ++ EKA + + +++ ACA L A + K +H
Sbjct: 245 TTIVH---------EKAT----------NERSDIISIVNILPACASLKALPQTKEIHSYA 285
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
I+ G D + ALI+ Y C G ++DA
Sbjct: 286 IRNGTFADAFVCNALIDTYAKC-------------------------------GSMKDAV 314
Query: 305 LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV 364
+FN + + +S+N+M+ GY G+ + LF+ M +I + +
Sbjct: 315 NVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENI-------------PLDVI 361
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
TW+++I+GY Q ++AL + M + T L AC+ LG+L QG HA+
Sbjct: 362 TWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYS 421
Query: 425 VKTPFES------------NVYVGTSLVDMYSRCGSINDAQASFSSIS--SPNVAAWTAL 470
+K S ++ V +L+DMYS+C S A+ F+SI NV WT +
Sbjct: 422 LKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVM 481
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQD--IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
+ GY+ +G ++A+ LF M+ + + PNA T +L AC + G +I + +
Sbjct: 482 IGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRH 541
Query: 529 GVVPTLEHYT--CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ ++ C++D+ + G + A MP + + V W +++S
Sbjct: 542 HEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMP-KRNEVSWTSMMSG 589
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 168/509 (33%), Positives = 271/509 (53%), Gaps = 27/509 (5%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN-MPNEYTFDSVIRA 227
A F + +V+V+ LI G V C L +M N MP Y+F S+I+A
Sbjct: 29 AASAFANVQNPNVLVFNALIRG---CVHCCYSEQALVHYMHMLRNNVMPTSYSFSSLIKA 85
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
C L G+ VHG + K GF+ + LIEFY G+ RV+D + + A
Sbjct: 86 CTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSRRVFDDMPERDVFAW 145
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
++I+ + G + A +F+ + E N ++N+MI GY G + ++ LF +MP R II
Sbjct: 146 TTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDII 205
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
S W +M++ Y +N +++ + L+ + + T + + A
Sbjct: 206 S-----------------WTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISA 248
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ LG+L G+ +H +LV F+ +VY+G+SL+DMY++CGSI+ A F + + N+ W
Sbjct: 249 CAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCW 308
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
+++G + HG EA+ +F M + I PNA TF+ +L+AC AG + EG + F SM +
Sbjct: 309 NCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQ 368
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
Y + P +EHY C+VDLL ++G L +A E I++M +E ++ +WGALL+ C N+E+
Sbjct: 369 DYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAH 428
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD-PGCSWIELNSR 645
A Q + L+ Y +L N+YA +W + IR + L V+K PG SW+E+N
Sbjct: 429 IAVQNLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWVEINKT 488
Query: 646 VHAFSVEDRNNPNCNVIYATLEHLTANLN 674
VH F+ D +P+ Y+ L L A L+
Sbjct: 489 VHLFAASDTYHPS----YSQLHLLLAELD 513
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 221/472 (46%), Gaps = 55/472 (11%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES 68
+T TQ+ +V N+ I+ C + A + F + V+ +N ++ G +++
Sbjct: 3 KTNTTQDCFLV--NQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQA 60
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
L M R+NV +FS+++ C L G+ +H V K G++ FV + L+ F
Sbjct: 61 LVHYMHMLRNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEF 120
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
Y+ ++ ++RVFD++ E + W+ M+ +V+ M+ A +F +MP+K+V W +I
Sbjct: 121 YSTFGDVGGSRRVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMI 180
Query: 189 SGYAK-----------------------SVDGC-------EKALKLFRWMRESGENMPNE 218
GY K ++ C ++ + LF + + G +P+E
Sbjct: 181 DGYGKLGNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGM-IPDE 239
Query: 219 YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
T +VI ACA LGA GK VH L+ GF+ D IG +LI+ Y C + D A+ V+ +
Sbjct: 240 VTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYK 299
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDS 334
L+ L N +I+GL + G +E+A +F + N++++ S++ G +++
Sbjct: 300 LQTKNLFCWNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEG 359
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+R F M I+ P++E + M+ + L E AL++ +R + +
Sbjct: 360 RRWFMSMVQDYCIA--------PQVEH----YGCMVDLLSKAGLLEDALEM---IRNMTV 404
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHL-VKTPFESNVYVGTSLVDMYSR 445
+ + L + C +L+ + +L V P S Y + LV+MY+
Sbjct: 405 EPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSNSGHY--SLLVNMYAE 454
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 89/193 (46%), Gaps = 8/193 (4%)
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
++KT + ++ + S IN A ++F+++ +PNV + AL+ G H +A
Sbjct: 1 MIKTNTTQDCFLVNQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQA 60
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL 543
++ + ML +++P + +F ++ AC G + + +G + T +++
Sbjct: 61 LVHYMHMLRNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEF 120
Query: 544 LGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA-AQKMFG-LDKKPIS 601
G + + DMP E D W ++SA ++ G+ A A ++F + +K ++
Sbjct: 121 YSTFGDVGGSRRVFDDMP-ERDVFAWTTMISA-----HVRDGDMASAGRLFDEMPEKNVA 174
Query: 602 AYVILSNIYAVLG 614
+ + + Y LG
Sbjct: 175 TWNAMIDGYGKLG 187
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 314/595 (52%), Gaps = 34/595 (5%)
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL---HEDNELLWSLMLVGYVQCNLM 166
++K +C + + F +C I + K+ L H + L+S L+ ++ +
Sbjct: 1 MIKPSSKCTKLISVD--FLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHS 58
Query: 167 SD---AFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
D A +F +M D + +I GYA+S + E A+ L+ +M E G + N YT+
Sbjct: 59 GDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYE-AVSLYYFMVERGVPVDN-YTYPF 116
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
V+ ACARLGA G+ H ++K GF D + ALI+FY C +F A V+D
Sbjct: 117 VLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRD 176
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTE-----ANSISYNSMIKGYAVYGQVDDSKRLF 338
+ N +IN ++ G E A + + +T+ + ++ S++ A G ++ K L
Sbjct: 177 VVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLH 236
Query: 339 EKMPHRSIISLNTMISVIPEM------------------ERNPVTWNSMISGYVQNNLHE 380
+ + + I +M E++ ++W SM+SG ++ +
Sbjct: 237 SYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQ 296
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+AL L+ M+ I+ T + AC+ G+L QG+ +H + K ++ + T+LV
Sbjct: 297 EALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALV 356
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
DMY++CGSI+ A F + NV W AL+ G + HG G +A+ LF+ M ++P+
Sbjct: 357 DMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDV 416
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
TF+ +L AC AGLV+EG+ +F++MK+ + + P +EHY CVVDLL R+ + +A FI++
Sbjct: 417 TFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIEN 476
Query: 560 MPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKK 619
MPI+ ++V+W LL AC + ++ E+ +++ L+ YV+LSN+YA + +W
Sbjct: 477 MPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHA 536
Query: 620 MDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+ +RK++ + ++K PGCSWIELN +H F DR++ IYA +E +T +N
Sbjct: 537 LKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVN 591
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 231/529 (43%), Gaps = 61/529 (11%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
+G L AR LF QM NTM+ GY++ E++SL M V ++ T+ +
Sbjct: 58 SGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFV 117
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L+ CA+L ++ G++ HC VLK+G+ FV + L+ FY NC A VFDE +
Sbjct: 118 LAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDV 177
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W++M+ ++ L AFD+ +M K D +
Sbjct: 178 VTWNIMINAHLNKGLSEKAFDLLDEMTKLDNL---------------------------- 209
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
P+E T S++ ACA+LG GK +H + G + + + A+++ YC C+ +
Sbjct: 210 ----RPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIE 265
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYA 326
A V++R+ + + S+++GL G ++A +F ++ E + I+ ++ A
Sbjct: 266 SAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACA 325
Query: 327 VYGQVDDSKR---LFEKMP--------------HRSIISLNTMISVIPEME-RNPVTWNS 368
G +D K L +K + S++ + V M RN TWN+
Sbjct: 326 QTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNA 385
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKT 427
+I G + E A+ L+ M + TF L ACS G + +G + A K
Sbjct: 386 LIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKF 445
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGLGSEAVLL 486
E + +VD+ R ++DA A ++ N W L+ G A +
Sbjct: 446 QIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKI 505
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLV--NEGMKIFRSMKSYGVVPT 533
++E + P++ +LS + AG+ + +K+ + MK+ G+ T
Sbjct: 506 GRRVIE--LEPDSCGRYVMLSN-LYAGVSQWDHALKLRKQMKNKGIEKT 551
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 187/426 (43%), Gaps = 75/426 (17%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITE--CGRNGQLVTARNLFDQMPIRTVVSWNTMLCGY 59
K + S+ L E L V N AI + C + + +A+ +F+++ + V+SW +ML G
Sbjct: 233 KFLHSYSKELGLDENLRV--NNAILDMYC-KCDDIESAQEVFNRIREKDVLSWTSMLSGL 289
Query: 60 SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
+K F E+L+L M + ++L+E T +LS CAQ +L GK IH L+ K C
Sbjct: 290 AKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDL 349
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
+ + L+ YA C I+ A +VF +M +
Sbjct: 350 VLETALVDMYAKCGSIDLALQVFR-------------------------------RMRVR 378
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
+V W LI G A G E A+ LF M E + MP++ TF +++ AC+ G EG
Sbjct: 379 NVFTWNALIGGLAMHGHG-EDAISLFDQM-EHDKLMPDDVTFIALLCACSHAGLVDEGLA 436
Query: 240 VHGLLIKCGFEFDESIG--GALIEFYCGCEAFDGAMRVYDRLENPCLNASN----SLING 293
+ + K F+ + + G +++ C D A+ +EN + A++ +L+
Sbjct: 437 MFQAM-KNKFQIEPRMEHYGCVVDLLCRARKVDDALAF---IENMPIKANSVLWATLLGA 492
Query: 294 LISMGRIEDAELIFNRLTEANSIS---YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
S G + AE I R+ E S Y + YA Q D + +L ++M ++ I
Sbjct: 493 CRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGI---- 548
Query: 351 TMISVIPEMERNP----VTWNSMISGYVQNNL-HEKALQLYMTM----RKLAID--RTRS 399
E+ P + N MI +V + H + Q+Y + R++ +D
Sbjct: 549 ---------EKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPG 599
Query: 400 TFSVLF 405
T +VLF
Sbjct: 600 TANVLF 605
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 191/643 (29%), Positives = 320/643 (49%), Gaps = 109/643 (16%)
Query: 106 IHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNL 165
+H ++K+G C G+ LL YA +E+A ++F+E+
Sbjct: 310 LHAKLIKNG--CVGIRGNHLLNLYAKSQNLEQAHKMFEEI-------------------- 347
Query: 166 MSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVI 225
P+ DV WT LISG+A+ + L LF M++ G PN++T V+
Sbjct: 348 -----------PQTDVFSWTVLISGFAR-IGLSADVLGLFTKMQDQGV-CPNQFTLSIVL 394
Query: 226 RACA-RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN--- 281
++C+ + GK +HG +++ G + D + +++++Y C F A +++ +
Sbjct: 395 KSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDT 454
Query: 282 --------------------------PCLNAS--NSLINGLISMG----------RIEDA 303
P +A+ N++I+GL+ G ++ A
Sbjct: 455 VSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAA 514
Query: 304 ELIFNRLT------EANSISY-----------------------NSMIKGYAVYGQVDDS 334
FN+LT A+S+S NS+I Y G+++ +
Sbjct: 515 GPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKA 574
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+F+ +P S S+ + V+W+SM+SGYVQN E AL+ + M +
Sbjct: 575 SVIFKHLPQES--SMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQV 632
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ + T + + AC+ G L+ G+ +H ++ K +V++G+S++DMY +CGS+NDA
Sbjct: 633 EVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWL 692
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F+ NV WT++++G + HG G EAV LFE+M+ + I PN +FVGVL+AC AGL
Sbjct: 693 IFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGL 752
Query: 515 VNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ EG K FR M+ YG+ P EH+TC+VDL GR+G L+E +EFI + I + VW + L
Sbjct: 753 LEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFL 812
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
S+C N+E+G +K+ L+ Y++ S+I A +W + IR + VKK
Sbjct: 813 SSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKK 872
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+P SWI+L ++VH+F + DR++P IY+ L+ L L +
Sbjct: 873 NPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEI 915
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 137/560 (24%), Positives = 249/560 (44%), Gaps = 59/560 (10%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
+ N + ++ L A +F+++P V SW ++ G+++ + L L + M
Sbjct: 322 IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQ 381
Query: 79 NVKLNETTFSTILSVCAQ-LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V N+ T S +L C+ +N GK IH +L++G + + + +L +Y C
Sbjct: 382 GVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGY 441
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+++F + E + + W++M+ Y+Q M + D+F ++P KD W +I G + +G
Sbjct: 442 AEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMR--NG 499
Query: 198 CEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
CE+ AL+L M +G N+ TF + + L GK +H ++K G D +
Sbjct: 500 CERVALELLYKMVAAGPAF-NKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVR 558
Query: 257 GALIEFYCGCEAFDGAMRVYDRL---------ENPCLNAS------NSLINGLISMGRIE 301
+LI+ YC C + A ++ L E C +A +S+++G + GR E
Sbjct: 559 NSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFE 618
Query: 302 DAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRL---FEKMPH-------RSII 347
DA F+ + E + + S++ A G ++ +++ +K+ H SII
Sbjct: 619 DALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSII 678
Query: 348 -------SLNTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
SLN + + +RN V W SMISG + +A++L+ M I
Sbjct: 679 DMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEV 738
Query: 400 TFSVLFHACSCLGSLQQG----QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA- 454
+F + ACS G L++G +L+ P + T +VD+Y R G +N+ +
Sbjct: 739 SFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHF---TCMVDLYGRAGRLNEIKEF 795
Query: 455 ----SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
+ S +SS W + ++ H + + + +LE + +A ++ S C
Sbjct: 796 IHNNAISKLSS----VWRSFLSSCRVHKNIEMGIWVCKKLLELEPF-DAGPYILFSSICA 850
Query: 511 RAGLVNEGMKIFRSMKSYGV 530
E KI M+ GV
Sbjct: 851 TEHRWEEAAKIRSLMQQRGV 870
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 175/389 (44%), Gaps = 63/389 (16%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
YA + LM ++ VS N ++ + G + + +LF Q+P + SWNTM+ G +
Sbjct: 441 YAEKLFGLMAEKD-TVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNG 499
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS 123
+L L+ M + N+ TFS L + + L+ L GKQIH VLK G FV +
Sbjct: 500 CERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRN 559
Query: 124 GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
L+ Y C E+E+A +F L +++ ++ N D + + V
Sbjct: 560 SLIDMYCKCGEMEKASVIFKHLPQESSMM-----------NSEESCDDAVV-----ESVS 603
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
W+ ++SGY ++ E ALK F +M S + +++T SV+ ACA G G+ VHG
Sbjct: 604 WSSMVSGYVQN-GRFEDALKTFSFMICSQVEV-DKFTLTSVVSACASAGVLELGRQVHGY 661
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA 303
+ K G D +G ++I+ Y C G + DA
Sbjct: 662 IQKIGHGLDVFLGSSIIDMYVKC-------------------------------GSLNDA 690
Query: 304 ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP 363
LIFN+ + N + + SMI G A++GQ ++ RLFE M + I N
Sbjct: 691 WLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITP-------------NE 737
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKL 392
V++ +++ L E+ + + MR++
Sbjct: 738 VSFVGVLTACSHAGLLEEGCKYFRLMREV 766
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
++LHA L+K G L+++Y++ ++ A F I +V +WT L++G++
Sbjct: 308 EVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARI 365
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
GL ++ + LF M +Q + PN T VL +C
Sbjct: 366 GLSADVLGLFTKMQDQGVCPNQFTLSIVLKSC 397
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 188/666 (28%), Positives = 333/666 (50%), Gaps = 63/666 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ A+ LFD+M R+V+S+N ++ GY + +++ L S + +KL++ +++ +L
Sbjct: 58 GEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVL 117
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S C Q+ GK IH L + G F+ + L+ Y C I+ A+ +F+ +EL
Sbjct: 118 SACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFES---SDEL 174
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
D V W LI+GYA+ V E+ LKL M +
Sbjct: 175 ----------------------------DNVSWNSLITGYAR-VGAYEEMLKLLVKMHHT 205
Query: 212 GENMPNEYTFDSVIRAC-ARLGAFCE-GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G + N +T S +++C L GK +HG +K G + D +G AL++ Y
Sbjct: 206 GLRL-NAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYL 264
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIE-----DAELIFNRLT----EANSISYNS 320
A++++ N + N++I G I I+ +A +F+++ + + +++S
Sbjct: 265 GDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSS 324
Query: 321 MIK----------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER--------N 362
+IK G ++ + ++ ++I L +++ + + +
Sbjct: 325 IIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLD 384
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
V+W +MI+GY QN E AL L+ + + + AC+ + + + G+ +H
Sbjct: 385 IVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHG 444
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+ VKT + V S + MY++ G+++ A+ +F I +P+V +W+ ++ + HG +
Sbjct: 445 YAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKD 504
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVV 541
A+ LFE+M I PN TF+GVL+AC GLV EG++ + SM K Y + ++H TC+V
Sbjct: 505 AINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIV 564
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
DLL R+G L +A+ FI + V+W LLS C + ++ G+ A+K+ LD + S
Sbjct: 565 DLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESS 624
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNV 661
+YV+L NIY G IR+ + ++K+PG SWIE+ + VH+F V D ++P +
Sbjct: 625 SYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQI 684
Query: 662 IYATLE 667
IY LE
Sbjct: 685 IYKKLE 690
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 204/474 (43%), Gaps = 94/474 (19%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y + M +A +F +M ++ V+ + LISGY + KA+ LF R + + +++
Sbjct: 54 YSKWGEMGNAQKLFDRMSERSVISYNILISGYG-GMGFYHKAIGLFSEARMACLKL-DKF 111
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
++ V+ AC ++ F GKV+HGL I CG + LI+ YC CE
Sbjct: 112 SYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCE------------ 159
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFE 339
RI+ A L+F E +++S+NS+I GYA G ++ +L
Sbjct: 160 -------------------RIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLV 200
Query: 340 KMPHRSI---------------ISLNTMISVIPEME------------------------ 360
KM H + ++LN M+S +
Sbjct: 201 KMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAK 260
Query: 361 ----------------RNPVTWNSMISGYVQNNLHEK-----ALQLYMTMRKLAIDRTRS 399
+N V +N+MI+G++Q +K AL+L+ M++ I +
Sbjct: 261 TGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDF 320
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
TFS + C+ + + + G+ +HAH+ K +S+ ++G++L+++YS GS D F+S
Sbjct: 321 TFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNST 380
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
++ +WT ++ GY+ +G A+ LF +L P+ +LSAC G
Sbjct: 381 PKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGE 440
Query: 520 KIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
++ G+ + + +SG+L A+ +++ D V W ++
Sbjct: 441 QVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIK-NPDVVSWSVMI 493
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 157/373 (42%), Gaps = 62/373 (16%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFD-----ESLSLVSTMHRSNVKLN 83
+ G L A LF P + VV +N M+ G+ + D E+L L S M R +K +
Sbjct: 259 AKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPS 318
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
+ TFS+I+ +C + + GKQIH + K + EF+GS L+ Y+ E+ + F+
Sbjct: 319 DFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFN 378
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ + + W+ M+ GY Q E AL
Sbjct: 379 STPKLDIVSWTTMIAGYAQNGQF--------------------------------ESALA 406
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
LF + SG+ P+E+ +++ ACA + A G+ VHG +K G + + I Y
Sbjct: 407 LFYELLASGKK-PDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMY 465
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSISYN 319
D A ++ ++NP + + + +I G +DA EL+ + N I++
Sbjct: 466 AKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFL 525
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT-----MISVIPEMER------------- 361
++ + G V++ R +E M + +N ++ ++ R
Sbjct: 526 GVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGF 585
Query: 362 --NPVTWNSMISG 372
+PV W +++SG
Sbjct: 586 GDHPVMWRTLLSG 598
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 169/397 (42%), Gaps = 39/397 (9%)
Query: 215 MPNEYTFDSV-----IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
MP+ + DSV ++ ++ G+ GK+ H +IK F + + Y
Sbjct: 1 MPSVFPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEM 60
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF----------NRLTEANSISYN 319
A +++DR+ + + N LI+G MG A +F ++ + A +S
Sbjct: 61 GNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSAC 120
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER--------------NPVT 365
IK +A+ G+V + + + ++ N +I + + ER + V+
Sbjct: 121 GQIKDFAL-GKVIHGLAIVCGLGQQVFLT-NLLIDMYCKCERIDHARLLFESSDELDNVS 178
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC--SCLGSLQQGQLLHAH 423
WNS+I+GY + +E+ L+L + M + T +C + + G+ LH +
Sbjct: 179 WNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGY 238
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH-----HG 478
VK + ++ VGT+L+DMY++ G + DA F + + NV + A++ G+
Sbjct: 239 TVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKE 298
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
EA+ LF M Q I P+ TF ++ C G +I + + + +
Sbjct: 299 CAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGS 358
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+++L G + + P +LD V W +++
Sbjct: 359 TLIELYSLLGSTEDQLKCFNSTP-KLDIVSWTTMIAG 394
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
TL + N I+ ++G L +A+ F+++ VVSW+ M+C ++ ++++L M
Sbjct: 453 TLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELM 512
Query: 76 HRSNVKLNETTFSTILSVCAQ 96
+ N+ TF +L+ C+
Sbjct: 513 KSYGIHPNQITFLGVLTACSH 533
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 196/636 (30%), Positives = 314/636 (49%), Gaps = 90/636 (14%)
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L+ C + SL KQIH L++KSG F S L+ F A L
Sbjct: 31 LLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIEFCA--------------LSPSR 73
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+L ++L L F P ++ +W LI ++ + +L LF M
Sbjct: 74 DLSYALSL------------FHSIHHQPP-NIFIWNTLIRAHSLTPTPT-SSLHLFSQML 119
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
SG PN +TF S+ ++CA+ A E K +H +K + +LI Y
Sbjct: 120 HSGL-YPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGEL 178
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
A V+D+ + +LI G +S G ++DA +F+ + + +S+N+MI GY G
Sbjct: 179 RHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSG 238
Query: 330 QVDDSKRLFEKM------PHRSII------------------------------------ 347
+ +++ F +M P++S +
Sbjct: 239 RFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVN 298
Query: 348 SLNTMISVIPEM-----------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+L M S E+ +++ + WN+MI GY +L+E+AL L+ M + +
Sbjct: 299 ALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTP 358
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDA 452
TF + AC+ LG+L G+ +HA++ K T +NV + TS++ MY++CG + A
Sbjct: 359 NDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVA 418
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
+ F S+ S ++A+W A+++G + +G A+ LFE M+ + P+ TFVGVLSAC +A
Sbjct: 419 EQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQA 478
Query: 513 GLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
G V G + F SM K YG+ P L+HY C++DLL RSG EA+ + +M +E D +WG+
Sbjct: 479 GFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGS 538
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
LL+AC +E GE A+++F L+ + AYV+LSNIYA G+W IR +L +
Sbjct: 539 LLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGM 598
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
KK PGC+ IE++ VH F V D+ +P I+ L+
Sbjct: 599 KKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLD 634
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 227/509 (44%), Gaps = 44/509 (8%)
Query: 52 WNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL 111
WNT++ +S SL L S M S + N TF ++ CA+ + + KQ+H L
Sbjct: 95 WNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHAL 154
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
K V + L+ Y+ E+ A+ VFD+ + + ++ ++ GYV + DA
Sbjct: 155 KLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARR 214
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
+F ++P KDVV W +I+GY +S E+AL F M+E+ + PN+ T SV+ AC L
Sbjct: 215 LFDEIPAKDVVSWNAMIAGYVQS-GRFEEALACFTRMQEA-DVSPNQSTMVSVLSACGHL 272
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
+ GK + + GF + + AL++ Y C A +++D +E+ + N++I
Sbjct: 273 RSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMI 332
Query: 292 NGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR--- 344
G + E+A ++F + N +++ +++ A G +D K + +
Sbjct: 333 GGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKG 392
Query: 345 -----------SIISLNTMISVIPEME--------RNPVTWNSMISGYVQNNLHEKALQL 385
SII + + E R+ +WN+MISG N E+AL L
Sbjct: 393 TGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGL 452
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYS 444
+ M TF + AC+ G ++ G + + K + ++D+ +
Sbjct: 453 FEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLA 512
Query: 445 RCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSE-AVLLFEI--------ML 491
R G ++A+ ++ P+ A W +L+N HG G A LFE+ +L
Sbjct: 513 RSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVL 572
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+I A + V A +R L ++GMK
Sbjct: 573 LSNIYAGAGRWDDV--AKIRTKLNDKGMK 599
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 203/442 (45%), Gaps = 59/442 (13%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS IT G + AR LFD++P + VVSWN M+ GY + +F+E+L+ + M +
Sbjct: 194 VSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEA 253
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+V N++T ++LS C L SL GK I V G+ + + L+ Y+ C EI A
Sbjct: 254 DVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTA 313
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+++FD + + + +LW+ M+ GY +L +A +F M +++V
Sbjct: 314 RKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVT---------------- 357
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK----CGFEFDES 254
PN+ TF +V+ ACA LGA GK VH + K G + S
Sbjct: 358 -----------------PNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVS 400
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA----ELIFNRL 310
+ ++I Y C + A +V+ + + L + N++I+GL G E A E + N
Sbjct: 401 LWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEG 460
Query: 311 TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
+ + I++ ++ G F ++ HR S+N + P+++ + MI
Sbjct: 461 FQPDDITFVGVLSACTQAG--------FVELGHRYFSSMNKDYGISPKLQH----YGCMI 508
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPF 429
++ ++A L M + ++ + + L +AC G ++ G+ + L + P
Sbjct: 509 DLLARSGKFDEAKVL---MGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPE 565
Query: 430 ESNVYVGTSLVDMYSRCGSIND 451
S YV L ++Y+ G +D
Sbjct: 566 NSGAYV--LLSNIYAGAGRWDD 585
>gi|345505212|gb|AEN99830.1| chlororespiratory reduction 4, partial [Brassica oleracea]
Length = 590
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 276/525 (52%), Gaps = 60/525 (11%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP-NEYTFDSVIRACARLGAFCEG 237
+D +W +I ++ VD KAL L M ES ++P ++++ ++AC+RLG EG
Sbjct: 69 EDPFLWNVVIKSHSHGVDP-RKALFLLCLMLES--SVPVDKFSLSLALKACSRLGFVKEG 125
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
VHG LIK G D + LI Y C A +V+DR+ + NS+I+G +
Sbjct: 126 TQVHGFLIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFDRMPERDSVSYNSMIDGYVKC 185
Query: 298 GRIEDA----------------------------------ELIFNRLTEANSISYNSMIK 323
G +E A E +F+ + E + IS+NSMI
Sbjct: 186 GLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVDVAEKLFDEMPEKDLISWNSMIG 245
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ERNPVTWNSM 369
GY +G+++D+K LF MP R +++ MI ++ +M R+ V +NSM
Sbjct: 246 GYVKHGRIEDAKGLFNVMPRRDVVTWAIMIDGYGKLGLVHVAKTLFDQMPHRDVVAYNSM 305
Query: 370 ISGYVQNNLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+SGYVQN H +AL+++ M K L D T + ++ A + LG L + +H ++V+
Sbjct: 306 MSGYVQNRYHMEALEVFNHMEKESHLTPDET--SLVIVLSAIAQLGRLSKAIDMHLYIVE 363
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV-L 485
F + +G +L+DMYS+CGSI A F I S ++ W A++ G + HGLG A +
Sbjct: 364 KQFPLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDM 423
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLL 544
LF+I + I P+ TFVGVL+AC +GLV EG+ F M+ + + P L+HY C+VD+L
Sbjct: 424 LFQIE-RRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDIL 482
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
RSG + A I+ MPIE + V+W L+AC E GE A+ + S+YV
Sbjct: 483 ARSGSIKLARNLIEGMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILXGGYNPSSYV 542
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+LSN+YA G W +R + ++K PGCSWIEL+ RVH F
Sbjct: 543 LLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWIELDGRVHEF 587
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 203/438 (46%), Gaps = 28/438 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+MP R VS+N+M+ GY K + + L M R K N T+++++
Sbjct: 155 GFLGFARQVFDRMPERDSVSYNSMIDGYVKCGLVESAGELFDLMPRE--KRNLITWNSMI 212
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
AQ DG + + E + ++ Y IE+AK +F+ + + +
Sbjct: 213 GGYAQ---RADGVDVAEKLFDEMPEKDLISWNSMIGGYVKHGRIEDAKGLFNVMPRRDVV 269
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W++M+ GY + L+ A +F +MP +DVV + ++SGY ++ E AL++F M +
Sbjct: 270 TWAIMIDGYGKLGLVHVAKTLFDQMPHRDVVAYNSMMSGYVQNRYHME-ALEVFNHMEKE 328
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E + V+ A A+LG + +H +++ F +G ALI+ Y C +
Sbjct: 329 SHLTPDETSLVIVLSAIAQLGRLSKAIDMHLYIVEKQFPLSGKLGVALIDMYSKCGSIQH 388
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFN---RLTEANSISYNSMIKGYAV 327
AMRV++ +E+ ++ N++I GL G E A +++F R + + I++ ++ +
Sbjct: 389 AMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLFQIERRSIKPDHITFVGVLNACSH 448
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V + FE M + I P ++ + M+ ++ + A L
Sbjct: 449 SGLVKEGLLCFELMRRKHKIE--------PRLQH----YGCMVDILARSGSIKLARNL-- 494
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRC 446
+ + I+ + ACS + G+L+ HL+ + + YV L +MY+
Sbjct: 495 -IEGMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILXGGYNPSSYV--LLSNMYASN 551
Query: 447 GSINDAQASFSSISSPNV 464
G D + + + N+
Sbjct: 552 GMWKDVRRVRTMMKEKNI 569
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR-SNVKLNETTF 87
G+ G + A+ LFDQMP R VV++N+M+ GY + E+L + + M + S++ +ET+
Sbjct: 279 GKLGLVHVAKTLFDQMPHRDVVAYNSMMSGYVQNRYHMEALEVFNHMEKESHLTPDETSL 338
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHE 147
+LS AQL L +H +++ + +G L+ Y+ C I+ A RVF+ +
Sbjct: 339 VIVLSAIAQLGRLSKAIDMHLYIVEKQFPLSGKLGVALIDMYSKCGSIQHAMRVFEGIES 398
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISGYAKSVDGCEKALK 203
+ W+ M+ G L AFD+ ++ ++ D + + +++ + S ++ L
Sbjct: 399 KSIDHWNAMIGGLAVHGLGESAFDMLFQIERRSIKPDHITFVGVLNACSHS-GLVKEGLL 457
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGA 233
F MR + P + ++ AR G+
Sbjct: 458 CFELMRRKHKIEPRLQHYGCMVDILARSGS 487
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 189/640 (29%), Positives = 323/640 (50%), Gaps = 52/640 (8%)
Query: 39 NLFDQMPIRTVVSWNTMLCG-YSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQL 97
+LFD++P T +T L A D + ++ M R V+++ TF + CA
Sbjct: 56 SLFDRLPHPTTFLHDTALRACLQASAGADHPVLILRRMRRGGVRMSAFTFHFVFRCCAAG 115
Query: 98 NSLIDGKQIHCLVLKSGYE-CFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+ +H L++ V + L+ YA+ ++A+R FDE+ + ++W+ +
Sbjct: 116 AGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATV 175
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ G V+ L+ +A + ++ P+++VV WT LI+GY+++ + A+ F M G P
Sbjct: 176 IGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPAD-AVYCFNCMLSDGVE-P 233
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
+E + AC++L G+++H L+ K + + + LI+ Y C A V+
Sbjct: 234 DEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVF 293
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
D ++GR + E +N +I GY G VD ++
Sbjct: 294 D------------------AVGRGQKPE------------PWNVIIDGYCKLGHVDIARS 323
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
LF++M R +I T+NSMI+GY+ + ALQL+M +R+ +
Sbjct: 324 LFDQMGARDVI-----------------TFNSMITGYIHSGRLRDALQLFMQLRRHGMRA 366
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
T L AC+ LG+L QG+ LHA + + E +VY+ T+LVDMY +CG +++A A F
Sbjct: 367 DNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVF 426
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+ +V W+A++ G + +G+G +A+ F M P + T++ VL+AC + L+N
Sbjct: 427 HRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLN 486
Query: 517 EGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
EG + F M+S + + P +EHY C++DLL RSG L EA ++ MP++ +AV+W ++LSA
Sbjct: 487 EGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSA 546
Query: 576 CWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
C N+++ AA+ + L + + YV L NIY +W + IR + VKK
Sbjct: 547 CRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTA 606
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
G S I + +VH F V D+++P I +E + L S
Sbjct: 607 GYSSITVAGQVHKFVVNDQSHPWTLEIITMMEEIARRLKS 646
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 201/412 (48%), Gaps = 23/412 (5%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G L AR L Q P R VVSW +++ GYS+ + +++ + M V+ +E
Sbjct: 181 RWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIG 240
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
LS C++L +L G+ +H LV K + + + L+ YA C +I +A+ VFD +
Sbjct: 241 ALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQ 300
Query: 150 EL-LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ W++++ GY + + A +F +M +DV+ + +I+GY S AL+LF +
Sbjct: 301 KPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHS-GRLRDALQLFMQL 359
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
R G N +T S++ ACA LGA +G+ +H + + E D + AL++ Y C
Sbjct: 360 RRHGMRADN-FTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGR 418
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKG 324
D A V+ R+ ++ +++I GL G DA F ++ + S++Y +++
Sbjct: 419 VDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTA 478
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
+ +++ ++ F +M RS+ L+ P++E + MI ++ L ++A+
Sbjct: 479 CSHSSLLNEGRQHFNEM--RSLHKLH------PQIEH----YGCMIDLLARSGLLDEAMH 526
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYV 435
L TM + ++ + AC ++ + HL+K P E VYV
Sbjct: 527 LVQTM---PMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYV 575
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 189/637 (29%), Positives = 301/637 (47%), Gaps = 119/637 (18%)
Query: 40 LFDQMPIRTVVSWNTMLCGY----SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+FD+MP++ VVSWNT++CG K+A M + N T + +L
Sbjct: 130 MFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASI 189
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+LN + +Q+HC +LKSG++ FVGS L+ YA ++EA+ FDE+
Sbjct: 190 ELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEV---------- 239
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA-KSVDGCEKALKLFRWMRESGEN 214
+D+V+W ++S YA V G KA +F+ MR G
Sbjct: 240 ---------------------SSRDLVLWNVMVSCYALNGVQG--KAFGVFKLMRLEGVK 276
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
+ +TF S+I +C LG+ GK VHGL+I+ F+ D + AL++
Sbjct: 277 -GDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVD------------- 322
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
+Y + EN IEDA F+ + N +S+ +M GY +G +
Sbjct: 323 MYSKNEN------------------IEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEX 364
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
RL ++M +++Y +LA+
Sbjct: 365 MRLLQEM-----------------------------------------IRVYTYPDELAL 383
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ + +C L + + +HA++V+ FE+ + + +LV YS+CGSI A
Sbjct: 384 -------ASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQ 436
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
SFSS++ P++ +WT+LM Y+ HGL + V +FE +L ++ P+ F+GVLSAC G
Sbjct: 437 SFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGGF 496
Query: 515 VNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V EG+ F M Y ++P EHYT ++DLLGR+G L EA + MP+E + GA L
Sbjct: 497 VLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEPRSDTLGAFL 556
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
AC + N+ + A++K+F ++ Y ++SN+YA +G W +RK + K
Sbjct: 557 GACKVYRNVGLARWASEKLFVMEPNEPGKYSLMSNMYASVGHWFDVARVRKLMRERCDFK 616
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
PGCSW+E VH F D+ +P +Y L+ L
Sbjct: 617 VPGCSWMETAGEVHTFVSRDKTHPRAVQVYGMLDLLV 653
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 33/283 (11%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A++ FD++ R +V WN M+ Y+ ++ + M VK + TF++++
Sbjct: 227 GLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMI 286
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ C L S GKQ+H L+++ ++ V S L+ Y+ IE+A++ FD + N +
Sbjct: 287 NSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMJVKNIV 346
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M VGY Q DG E L +R
Sbjct: 347 SWTTMXVGYGQHG-------------------------------DGKEXMRLLQEMIRV- 374
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E S++ +C L A E VH +++ GFE SI AL+ Y C +
Sbjct: 375 -YTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGS 433
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
A + + + P + + SL+ G + +F ++ +N
Sbjct: 434 AFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSN 476
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 5/207 (2%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+N + AR FD M ++ +VSW TM GY + E + L+ M R +E ++
Sbjct: 326 KNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYPDELALAS 385
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
ILS C L++ + Q+H V+++G+E F + + L+ Y+ C I A + F + E +
Sbjct: 386 ILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPD 445
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGYAKSVDGCEKALKLF 205
+ W+ ++ Y L DVF K+ + D V + ++S A E L F
Sbjct: 446 IISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGGFVLE-GLHYF 504
Query: 206 RWMRESGENMPNEYTFDSVIRACARLG 232
M + MP+ + S+I R G
Sbjct: 505 NLMINVYQIMPDSEHYTSIIDLLGRAG 531
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 148/300 (49%), Gaps = 39/300 (13%)
Query: 293 GLISMGRIEDAELIFNRLTEANSISY-NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
G + G+ A +I +L N +S N ++ Y + +D ++F++MP ++++S
Sbjct: 87 GFLHGGKQLHAHVI--KLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVS--- 141
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQL-YMTMRKLAIDRTRS---TFSVLFHA 407
WN++I G V+ N ++L + R++ ++ T + L A
Sbjct: 142 --------------WNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRA 187
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
L + + LH ++K+ F+SN +VG++LVD Y++ G +++AQ++F +SS ++ W
Sbjct: 188 SIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLW 247
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS 527
+++ Y+ +G+ +A +F++M + + + TF ++++C G G ++
Sbjct: 248 NVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQV------ 301
Query: 528 YGVVPTLEHYTCVVDLLGRSG--HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
+G++ L + +D+L S ++ E I+D D ++ ++S W M VG
Sbjct: 302 HGLIIRL---SFDLDVLVASALVDMYSKNENIEDARKAFDGMJVKNIVS----WTTMXVG 354
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 91/230 (39%), Gaps = 8/230 (3%)
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
LG L G+ LHAH++K + + + ++ +Y +C ND F + NV +W L
Sbjct: 86 LGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTL 145
Query: 471 MNGYSHHGLGSEAVLL----FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
+ G V L F M+ + + PN T G+L A + V ++ +
Sbjct: 146 ICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFIL 205
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
G + +VD + G + EA+ ++ D V+W ++S C+ ++
Sbjct: 206 KSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVS-SRDLVLWNVMVS-CYALNGVQGKA 263
Query: 587 RAAQKMFGLD--KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
K+ L+ K + + N VLG G + + L D
Sbjct: 264 FGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLD 313
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 209/700 (29%), Positives = 339/700 (48%), Gaps = 85/700 (12%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQM-PIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
+T V N +T + G + AR +FDQM +R +VSW M ++ ESL L+
Sbjct: 73 DTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLG 132
Query: 74 TMHRSNVKLNETTFSTILSVC-AQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYAN 131
M ++ N T C Q + G + VLK+G+ + VG L+ +A
Sbjct: 133 EMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFAR 192
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
++ A+RVFD L E + VVWT LI+ Y
Sbjct: 193 NGDLVAAQRVFDGLIE-------------------------------RTSVVWTLLITRY 221
Query: 192 AKSVDGC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
++ GC K ++LF M + G P+ Y+ S+I AC LG+ G+ +H + ++ G
Sbjct: 222 VQA--GCASKVVELFLHMLDDGFE-PDGYSMSSMISACTELGSVRLGQQLHSVALRLGLV 278
Query: 251 FDESIGGALIEFYCGCE---AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAEL-- 305
D + L++ Y + + + A +V+ + + + +LI+G + G E+ +
Sbjct: 279 SDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMAL 338
Query: 306 ---IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
+ N N I+Y++++K A D +++ + SI +N
Sbjct: 339 FREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVN------------ 386
Query: 363 PVTWNSMISGYVQNNLHEKAL----QLYMT-----MRKLAIDRTRS-------------- 399
V N+++S Y ++ E+A QLY T + +R +
Sbjct: 387 -VVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGVS 445
Query: 400 --TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
TF+ L A + +G L +GQ LHA +K F S+ + SLV MY+RCG + DA +F
Sbjct: 446 TFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFD 505
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
+ NV +WT++++G + HG +A+ +F M+ + PN T++ VLSAC GLV E
Sbjct: 506 EMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKE 565
Query: 518 GMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
G + FRSM K +G++P +EHY C+VDLL RSG + EA +FI +MP + DA+VW LLSAC
Sbjct: 566 GKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSAC 625
Query: 577 WFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPG 636
+ N E+GE AA + L+ + + YV+LSN+YA G W + IR + + K+ G
Sbjct: 626 RTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETG 685
Query: 637 CSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
SW+++ + +H F D ++P IYA L L + +
Sbjct: 686 LSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDI 725
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 133/574 (23%), Positives = 231/574 (40%), Gaps = 104/574 (18%)
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKSG-YECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
+ +L+ A+ L G+ +H +L+S + V + LL Y+ C +E A+RVFD++
Sbjct: 44 AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQM- 102
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
C + +D+V WT + S A+ +G E+
Sbjct: 103 ----------------CGV-------------RDLVSWTAMASCLAR--NGAERESLRLL 131
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAF-CEGKVVHGLLIKCGF-EFDESIGGALIEFYC 264
PN +T + RAC F G VV G ++K GF D S+G ALI+ +
Sbjct: 132 GEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFA 191
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLT---EANSISYNS 320
A RV+D L LI + G EL + L E + S +S
Sbjct: 192 RNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSS 251
Query: 321 MIKGYAVYGQVDDSKRL----------------------FEKMP-HRSIISLNTMISVIP 357
MI G V ++L + K+ RS+ + +P
Sbjct: 252 MISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMP 311
Query: 358 EMERNPVTWNSMISGYVQNNLHEK-ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ 416
N ++W ++ISGYVQ+ + E + L+ M +I T+S L AC+ L
Sbjct: 312 R--HNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDS 369
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA---------- 466
G+ +HAH++KT VG +LV MY+ G + +A+ +F + N+ +
Sbjct: 370 GRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERN 429
Query: 467 -------------------WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
+ +L++ + GL ++ L + ++ + ++S
Sbjct: 430 NASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVS 489
Query: 508 ACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM---PIEL 564
R G + + + F MK + V+ +T ++ L + G+ +A DM ++
Sbjct: 490 MYARCGYLEDACRAFDEMKDHNVIS----WTSIISGLAKHGYAKQALSMFHDMILAGVKP 545
Query: 565 DAVVWGALLSACWFWMNMEVGE---RAAQKMFGL 595
+ V + A+LSAC ++ G+ R+ QK GL
Sbjct: 546 NDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGL 579
>gi|345505206|gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionema grandiflorum]
Length = 594
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 283/530 (53%), Gaps = 60/530 (11%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+D +W +I Y+ +D +AL LF M E+G + ++++ V++AC+RL EG
Sbjct: 64 EDPYLWNAVIKSYSHGIDP-RRALLLFCLMIENGVCV-DKFSLSLVLKACSRLEFLKEGM 121
Query: 239 VVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
+HG L K G D + LI Y CGC F A +V+DR+ + NS+I+G +
Sbjct: 122 QIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGF--ARQVFDRMPQRDSVSYNSMIDGYVK 179
Query: 297 MGRIEDAELIFNRLTE--ANSISYNSMIKGYAV--------------------------- 327
G ++ A +F+ + N IS+NSMI GYA
Sbjct: 180 CGLMKSAHKLFDLMPREIKNLISWNSMISGYAQTADGLNTASKLFSEMPEKDLISWNSMI 239
Query: 328 -----YGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ERNPVTWNS 368
+G+++D+K LF+ MP R +++ TMI S+ +M +R+ V NS
Sbjct: 240 NGCVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKSLFDQMHQRDVVACNS 299
Query: 369 MISGYVQNNLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
M++GYVQN H +AL+++ M K L+ D T T ++ A + LG L + +H ++V
Sbjct: 300 MMAGYVQNKYHMEALEIFNDMEKDSHLSPDET--TLVIVLSAIAQLGRLSKAMSMHVYIV 357
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ F +G +L+DM+S+CGSI A + F I + ++ W A++ G + HGLG A
Sbjct: 358 EKRFPLGGKLGVALIDMHSKCGSIQHAISVFEGIENKSIDHWNAMIGGLAIHGLGELAFD 417
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
+ + I P+ TF+GVL+AC +GLV EG+ F M + + + P L+HY C+VD+L
Sbjct: 418 MLMQIERCSIQPDXITFIGVLNACSHSGLVKEGLLCFELMRRKHXIEPRLQHYGCLVDVL 477
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
RSG + A+ I+DMP+E + V+W + LSAC E GE A+ + S+YV
Sbjct: 478 SRSGSIELAKHLIEDMPMEPNDVIWRSFLSACSTHEEFETGELVAKHLILQAGYNPSSYV 537
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
+LSN+YA LG W +R + ++ K PGCSWIEL+ VH F V+D+
Sbjct: 538 LLSNMYASLGMWKDVRRVRMMMKQRKLHKIPGCSWIELDGNVHEFFVQDK 587
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 208/453 (45%), Gaps = 36/453 (7%)
Query: 52 WNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVL 111
WN ++ YS +L L M + V +++ + S +L C++L L +G QIH +
Sbjct: 69 WNAVIKSYSHGIDPRRALLLFCLMIENGVCVDKFSLSLVLKACSRLEFLKEGMQIHGFLR 128
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
K+G F+ + L+ Y C + A++VFD + + + + ++ M+ GYV+C LM A
Sbjct: 129 KTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLMKSAHK 188
Query: 172 VFIKMPK--KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+F MP+ K+++ W +ISGYA++ DG A KLF M E + +++S+I C
Sbjct: 189 LFDLMPREIKNLISWNSMISGYAQTADGLNTASKLFSEMPEK-----DLISWNSMINGCV 243
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
+ G + K + ++ + D +I+ Y A ++D++ + A NS
Sbjct: 244 KHGRIEDAKGLFDVMPR----RDVVTWATMIDGYAKLGFVHHAKSLFDQMHQRDVVACNS 299
Query: 290 LINGLISMGRIEDAELIFNRLTEANSISYNS-----MIKGYAVYGQVDDSKRLF-----E 339
++ G + +A IFN + + + +S + ++ A G++ + + +
Sbjct: 300 MMAGYVQNKYHMEALEIFNDMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMHVYIVEK 359
Query: 340 KMP------------HRSIISLNTMISVIPEMERNPVT-WNSMISGYVQNNLHEKALQLY 386
+ P H S+ ISV +E + WN+MI G + L E A +
Sbjct: 360 RFPLGGKLGVALIDMHSKCGSIQHAISVFEGIENKSIDHWNAMIGGLAIHGLGELAFDML 419
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL-VKTPFESNVYVGTSLVDMYSR 445
M + + +I TF + +ACS G +++G L + K E + LVD+ SR
Sbjct: 420 MQIERCSIQPDXITFIGVLNACSHSGLVKEGLLCFELMRRKHXIEPRLQHYGCLVDVLSR 479
Query: 446 CGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
GSI A+ + PN W + ++ S H
Sbjct: 480 SGSIELAKHLIEDMPMEPNDVIWRSFLSACSTH 512
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 192/430 (44%), Gaps = 34/430 (7%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+MP R VS+N+M+ GY K + L M R +K N ++++++
Sbjct: 150 GCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLMKSAHKLFDLMPR-EIK-NLISWNSMI 207
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S AQ DG + E + ++ IE+AK +FD + + +
Sbjct: 208 SGYAQ---TADGLNTASKLFSEMPEKDLISWNSMINGCVKHGRIEDAKGLFDVMPRRDVV 264
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY + + A +F +M ++DVV +++GY ++ E AL++F M +
Sbjct: 265 TWATMIDGYAKLGFVHHAKSLFDQMHQRDVVACNSMMAGYVQNKYHME-ALEIFNDMEKD 323
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T V+ A A+LG + +H +++ F +G ALI+ + C +
Sbjct: 324 SHLSPDETTLVIVLSAIAQLGRLSKAMSMHVYIVEKRFPLGGKLGVALIDMHSKCGSIQH 383
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-------TEANSISYNSMIKG 324
A+ V++ +EN ++ N++I GL G EL F+ L + + I++ ++
Sbjct: 384 AISVFEGIENKSIDHWNAMIGGLAIHGL---GELAFDMLMQIERCSIQPDXITFIGVLNA 440
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
+ G V + FE M + I P ++ + ++ ++ E A
Sbjct: 441 CSHSGLVKEGLLCFELMRRKHXIE--------PRLQH----YGCLVDVLSRSGSIELAKH 488
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMY 443
L M D +F ACS + G+L+ HL+ + + + YV L +MY
Sbjct: 489 LIEDMPMEPNDVIWRSF---LSACSTHEEFETGELVAKHLILQAGYNPSSYV--LLSNMY 543
Query: 444 SRCGSINDAQ 453
+ G D +
Sbjct: 544 ASLGMWKDVR 553
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 37/255 (14%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E ++S N I C ++G++ A+ LFD MP R VV+W TM+ GY+K + SL
Sbjct: 229 EKDLISWNSMINGCVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKSLFDQ 288
Query: 75 MHR--------------------------------SNVKLNETTFSTILSVCAQLNSLID 102
MH+ S++ +ETT +LS AQL L
Sbjct: 289 MHQRDVVACNSMMAGYVQNKYHMEALEIFNDMEKDSHLSPDETTLVIVLSAIAQLGRLSK 348
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
+H +++ + +G L+ ++ C I+ A VF+ + + W+ M+ G
Sbjct: 349 AMSMHVYIVEKRFPLGGKLGVALIDMHSKCGSIQHAISVFEGIENKSIDHWNAMIGGLAI 408
Query: 163 CNLMSDAFDVFIKMPK----KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE 218
L AFD+ +++ + D + + +++ + S ++ L F MR P
Sbjct: 409 HGLGELAFDMLMQIERCSIQPDXITFIGVLNACSHS-GLVKEGLLCFELMRRKHXIEPRL 467
Query: 219 YTFDSVIRACARLGA 233
+ ++ +R G+
Sbjct: 468 QHYGCLVDVLSRSGS 482
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 18/193 (9%)
Query: 420 LHAHLVKTPFESNVYVGTSLV-----------DMYSRCGSINDAQASFSSISSPNVAAWT 468
+HA L+ T N + T +V ++RC SFS+ + W
Sbjct: 11 MHARLITTGLIKNPNLTTRIVLAFVASRRSYLAEFARCVFYEYYLCSFSAGEGEDPYLWN 70
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
A++ YSH A+LLF +M+E + + + VL AC R + EGM+I ++
Sbjct: 71 AVIKSYSHGIDPRRALLLFCLMIENGVCVDKFSLSLVLKACSRLEFLKEGMQIHGFLRKT 130
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG-ER 587
G+ L C++ L + G L A + MP + D+V + +++ ++ G +
Sbjct: 131 GIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMP-QRDSVSYNSMIDG-----YVKCGLMK 184
Query: 588 AAQKMFGLDKKPI 600
+A K+F L + I
Sbjct: 185 SAHKLFDLMPREI 197
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 184/593 (31%), Positives = 305/593 (51%), Gaps = 76/593 (12%)
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
+L Y + N M+ A +F ++P+++ WT LISG+A++ E LFR M+ G
Sbjct: 330 LLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARA-GSSEMVFNLFREMQAKGA-C 387
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PN+YT SV++ C+ GK VH +++ G + D +G ++++ Y C+ F+ A R+
Sbjct: 388 PNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERL 447
Query: 276 -------------------------------YDRLENPCLNASNSLINGLISMGR----- 299
+ RL + + N++++GL+ G
Sbjct: 448 FELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHAL 507
Query: 300 ----------IEDAELIFN-RLTEANSISY-----------------------NSMIKGY 325
E + + F+ L A+S+S+ +S+++ Y
Sbjct: 508 EQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMY 567
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
G++D + + +P + N +S E + V+W SM+SGYV N +E L+
Sbjct: 568 CKCGRMDKASIILRDVPLDVLRKGNARVSY-KEPKAGIVSWGSMVSGYVWNGKYEDGLKT 626
Query: 386 YMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
+ M R+L + R T + + AC+ G L+ G+ +HA++ K + YVG+SL+DMYS
Sbjct: 627 FRLMVRELVVVDIR-TVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYS 685
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+ GS++DA F + PN+ WT++++GY+ HG G A+ LFE ML Q I+PN TF+G
Sbjct: 686 KSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLG 745
Query: 505 VLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
VL+AC AGL+ EG + FR MK +Y + P +EH T +VDL GR+GHL + + FI I
Sbjct: 746 VLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGIS 805
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
VW + LS+C N+E+G+ ++ + + AYV+LSN+ A +W + +R
Sbjct: 806 HLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVR 865
Query: 624 KRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+ VKK PG SWI+L ++H F + DR++P + IY+ L+ L L +
Sbjct: 866 SLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEI 918
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 155/350 (44%), Gaps = 61/350 (17%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTML-----CG 58
YA + LM E +VS N I R G + + ++F ++P + VVSWNT++ CG
Sbjct: 443 YAERLFELM-NEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCG 501
Query: 59 YSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF 118
Y + A L + M + + TFS L + + L+ + G+Q+H +VLK G++
Sbjct: 502 YERHA-----LEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSD 556
Query: 119 EFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK 178
F+ S L+ Y C +++A + ++ D L V K PK
Sbjct: 557 GFIRSSLVEMYCKCGRMDKASIILRDVPLD---------------VLRKGNARVSYKEPK 601
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWM-RESGENMPNEYTFDSVIRACARLGAFCEG 237
+V W ++SGY + E LK FR M RE + + T ++I ACA G G
Sbjct: 602 AGIVSWGSMVSGYVWN-GKYEDGLKTFRLMVRE--LVVVDIRTVTTIISACANAGILEFG 658
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
+ VH + K G D +G +LI+ Y + D
Sbjct: 659 RHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLD--------------------------- 691
Query: 298 GRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
DA ++F + E N + + SMI GYA++GQ + LFE+M ++ II
Sbjct: 692 ----DAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGII 737
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 1/156 (0%)
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
LHA VK + L+ +Y++ ++ AQ F I N WT L++G++ G
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
LF M + PN T VL C + G + M G+ +
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++DL + AE + M E D V W ++ A
Sbjct: 431 ILDLYLKCKVFEYAERLFELMN-EGDVVSWNIMIGA 465
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/505 (31%), Positives = 261/505 (51%), Gaps = 57/505 (11%)
Query: 212 GENMPNEYTF-DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G +P + F +++++ C +G++VH +++ F D +G L+ Y C + +
Sbjct: 53 GSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLE 112
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKG-- 324
A +V++++ +LI+G R DA L FN++ N + +S+IK
Sbjct: 113 EARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
Query: 325 ---------------------------------YAVYGQVDDSKRLFEKMPHRSIISLNT 351
Y YG +DD++ +F+ +
Sbjct: 173 AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE--------- 223
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
RN V+WN++I+G+ + + EKAL+L+ M + + +++ LF ACS
Sbjct: 224 --------SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSST 275
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
G L+QG+ +HA+++K+ + + G +L+DMY++ GSI+DA+ F ++ +V +W +L+
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
Y+ HG G EAV FE M I PN +F+ VL+AC +GL++EG + MK G+V
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV 395
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
P HY VVDLLGR+G L+ A FI++MPIE A +W ALL+AC N E+G AA+
Sbjct: 396 PEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEH 455
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+F LD +VIL NIYA G+W +RK++ VKK+P CSW+E+ + +H F
Sbjct: 456 VFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVA 515
Query: 652 EDRNNPNCNVIYATLEHLTANLNSV 676
D +P I E + A + +
Sbjct: 516 NDERHPQREEIARKWEEVLAKIKEL 540
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 203/493 (41%), Gaps = 91/493 (18%)
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S + + ++T+L C LI G+ +H +L+S + +G+ LL YA C +EE
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++ VF KMP++D V WT LISGY++
Sbjct: 114 ARK-------------------------------VFEKMPQRDFVTWTTLISGYSQHDRP 142
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
C+ AL F M G + PNE+T SVI+A A C G +HG +KCGF+ + +G
Sbjct: 143 CD-ALLFFNQMLRFGYS-PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGS 200
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EA 313
AL++ Y D A V+D LE+ + N+LI G E A +F +
Sbjct: 201 ALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRP 260
Query: 314 NSISY-----------------------------------NSMIKGYAVYGQVDDSKRLF 338
+ SY N+++ YA G + D++++F
Sbjct: 261 SHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF 320
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
+++ R ++S WNS+++ Y Q+ ++A+ + MR++ I
Sbjct: 321 DRLAKRDVVS-----------------WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
+F + ACS G L +G + + K + ++VD+ R G +N A
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423
Query: 459 IS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
+ P A W AL+N H E + E D + V + + G N+
Sbjct: 424 MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELD-PDDPGPHVILYNIYASGGRWND 482
Query: 518 GMKIFRSMKSYGV 530
++ + MK GV
Sbjct: 483 AARVRKKMKESGV 495
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 200/470 (42%), Gaps = 69/470 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV N + + G L AR +F++MP R V+W T++ GYS+ + ++L + M R
Sbjct: 95 IVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
NE T S+++ A G Q+H +K G++ VGS LL Y +++
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VFD L N++ W+ LI+G+A+ G
Sbjct: 215 AQLVFDALESRNDVSWN-------------------------------ALIAGHARR-SG 242
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
EKAL+LF+ M G P+ +++ S+ AC+ G +GK VH +IK G + G
Sbjct: 243 TEKALELFQGMLRDGFR-PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EA 313
L++ Y + A +++DRL + + NSL+ G ++A F +
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
N IS+ S++ + G +D+ +E M I+ P W+ Y
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV---------------PEAWH-----Y 401
Query: 374 VQ-NNLHEKALQLYMTMR---KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TP 428
V +L +A L +R ++ I+ T + + L +AC + + G H+ + P
Sbjct: 402 VTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDP 461
Query: 429 FESNVYVGTSLVDMYSRCGSINDA-----QASFSSISSPNVAAWTALMNG 473
+ +V L ++Y+ G NDA + S + +W + N
Sbjct: 462 DDPGPHV--ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENA 509
>gi|297850366|ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
lyrata]
gi|297338906|gb|EFH69323.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
lyrata]
Length = 1490
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 198/702 (28%), Positives = 338/702 (48%), Gaps = 57/702 (8%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS 70
L + + V T K ++ + G LV AR +FD M R + +W+ M+ YS+ ++ E
Sbjct: 109 LFPEPDVFVET-KLLSMYAKCGCLVDARKVFDSMRERNLYTWSAMIGAYSRENRWREVSK 167
Query: 71 LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
L M V ++ F IL CA + GK IH +V+K G V + +L YA
Sbjct: 168 LFRLMMEEGVLPDDFLFPKILQGCANCGDVETGKLIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV----VVWTK 186
C E + A + F + E + + W+ +L+ Y Q +A ++ +M K+ + V W
Sbjct: 228 KCGEWDFATKFFRRMKERDVVAWNSVLLAYCQNGKHEEAVELVEEMEKEGISPGLVTWNI 287
Query: 187 LISGYAKSVDGCEKALKL-------------FRW-----------MRESGENM------- 215
LI GY + + C+ A+ L F W MR +M
Sbjct: 288 LIGGYNQ-LGKCDAAMDLMQKMENFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 216 ---PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
PN T S + AC+ L G VH + +K GF D +G +L++ Y C + A
Sbjct: 347 GVVPNAVTIMSAVSACSYLKVINLGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA 406
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS----ISYNSMIKGYAVY 328
+V+D ++N + NS+I G G A +F R+ +AN I++N+MI GY
Sbjct: 407 RKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANVRPNIITWNTMISGYIKN 466
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G ++ LF++M +++RN TWN +I+GY+QN + AL+++
Sbjct: 467 GDEGEAMDLFQRMEKDG------------KVQRNTATWNLIIAGYIQNGKKDDALEIFRK 514
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M+ T L AC+ L + + +H +++ ++ V +L D Y++ G
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGTKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
I ++ F + + ++ W +L+ GY HG A+ LF M Q I PN T ++ A
Sbjct: 575 IGYSKTIFMGMETKDIITWNSLIGGYVLHGSYGPALELFNQMKTQGIKPNRGTLSSIILA 634
Query: 509 CVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
G V+EG K+F S+ + Y ++P LEH + +V L GRS L EA +FI++M I+ +
Sbjct: 635 HGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVSLYGRSNRLEEALQFIQEMNIQSETP 694
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
+W + L+ C ++++ AA+ +F L+ + I+S IYA+ K G+ ++ +K
Sbjct: 695 IWESFLTGCRIHGDIDMAIHAAENLFSLEPENTVTENIVSQIYALGAKLGRSLEGKKPRR 754
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+KK G SWIE+ + +H F+ D++ +++Y +E +
Sbjct: 755 DNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDLLYPWVEKM 796
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 117/241 (48%), Gaps = 9/241 (3%)
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
RST+ L +C GS+ G++LHA P E +V+V T L+ MY++CG + DA+ F
Sbjct: 81 RSTYLNLLESCIDSGSIHLGRILHARFGLFP-EPDVFVETKLLSMYAKCGCLVDARKVFD 139
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
S+ N+ W+A++ YS E LF +M+E+ ++P+ F +L C G V
Sbjct: 140 SMRERNLYTWSAMIGAYSRENRWREVSKLFRLMMEEGVLPDDFLFPKILQGCANCGDVET 199
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
G I + G+ L ++ + + G A +F + M E D V W ++L A
Sbjct: 200 GKLIHSVVIKLGMSSCLRVSNSILAVYAKCGEWDFATKFFRRMK-ERDVVAWNSVLLA-- 256
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNI----YAVLGKWGKKMDIRKRLTHLEVKK 633
+ E A + + ++K+ IS ++ NI Y LGK MD+ +++ + +
Sbjct: 257 -YCQNGKHEEAVELVEEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMENFGITA 315
Query: 634 D 634
D
Sbjct: 316 D 316
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 160/348 (45%), Gaps = 31/348 (8%)
Query: 284 LNASNSLIN-GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMP 342
LN S I+ G I +GRI A F E + ++ YA G + D++++F+ M
Sbjct: 85 LNLLESCIDSGSIHLGRILHAR--FGLFPEPDVFVETKLLSMYAKCGCLVDARKVFDSM- 141
Query: 343 HRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
ERN TW++MI Y + N + +L+ M + + F
Sbjct: 142 ----------------RERNLYTWSAMIGAYSRENRWREVSKLFRLMMEEGVLPDDFLFP 185
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+ C+ G ++ G+L+H+ ++K S + V S++ +Y++CG + A F +
Sbjct: 186 KILQGCANCGDVETGKLIHSVVIKLGMSSCLRVSNSILAVYAKCGEWDFATKFFRRMKER 245
Query: 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIF 522
+V AW +++ Y +G EAV L E M ++ I P T+ ++ + G + M +
Sbjct: 246 DVVAWNSVLLAYCQNGKHEEAVELVEEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 523 RSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM---PIELDAVVWGALLSACWFW 579
+ M+++G+ + +T ++ L +G ++A + + M + +AV + +SAC +
Sbjct: 306 QKMENFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSYL 365
Query: 580 MNMEVGERA---AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRK 624
+ +G A KM +D ++ +++ + K GK D RK
Sbjct: 366 KVINLGSEVHSIAVKMGFIDD-----VLVGNSLVDMYSKCGKLEDARK 408
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 198/671 (29%), Positives = 339/671 (50%), Gaps = 64/671 (9%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES 68
+T + ++ + +N ++ G NG + A +F MP R +VSWN+M+ +S +E
Sbjct: 212 KTRLVEDVFV--SNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEEC 269
Query: 69 LSLVSTMHRSNVKLNET----TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSG 124
L+ M + ++ T T +T+L VCA+ + GK +H L +K + V +
Sbjct: 270 FLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNA 329
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVW 184
L+ Y+ +C ++DA +F K+VV W
Sbjct: 330 LMDMYS-------------------------------KCGCINDAQVIFKLNNNKNVVSW 358
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGL 243
++ G++ + D K L R M G ++ +E T + + C K +H
Sbjct: 359 NTMVGGFSAAGD-IHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCY 417
Query: 244 LIKCGF-EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING--------- 293
+K F +E + A + Y C + A RV+ + + +N+ N+LI G
Sbjct: 418 SLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRL 477
Query: 294 -LISMGRIEDAELIFNRLTEANSISYNSMIK----GYAVYGQVDDSKRLFEKMPHRSIIS 348
L + +++ + L+ + T + +S S IK G V+G + ++ + + S++S
Sbjct: 478 SLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLS 537
Query: 349 L-------NTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRST 400
L +T + ME + V+WN+M++GY+QN E+AL L+ M + +
Sbjct: 538 LYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEIS 597
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+F ACS L SL+ G+ H + +K E N ++ S++DMY++ GS+ ++ F+ +
Sbjct: 598 MMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLK 657
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
+VA+W A++ GY HG EA+ LFE M P+ TF+GVL+AC +GLV+EG+
Sbjct: 658 ERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLT 717
Query: 521 IFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEF-IKDMPIELDAVVWGALLSACWF 578
MK+ +G+ PTL+HY CV+D+L R+G L EA + ++M E +W LLS+C
Sbjct: 718 YLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRI 777
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
N+E+GE+ A K+F + + YV+LSN+YA GKW + +R+R+ + ++KD GCS
Sbjct: 778 HKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCS 837
Query: 639 WIELNSRVHAF 649
WIELN +V +F
Sbjct: 838 WIELNGKVFSF 848
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 126/599 (21%), Positives = 238/599 (39%), Gaps = 100/599 (16%)
Query: 23 KAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL-VSTMHRSNVK 81
+ IT G +R++FD + + + WN ++ YS+ + L + V + S +
Sbjct: 122 RVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLL 181
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ TF ++ CA ++ + G +H LV+K+ FV + L+ FY + +A RV
Sbjct: 182 PDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRV 241
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIK-MPKKDVVVWTKLISGYAKSVDGCEK 200
F + E N + W+ M+ + L + F + + M K D + +T
Sbjct: 242 FKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFT--------------- 286
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
P+ T +V+ CAR GK VHGL +K + + + AL+
Sbjct: 287 ---------------PDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALM 331
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE------------------D 302
+ Y C + A ++ N + + N+++ G + G I D
Sbjct: 332 DMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRAD 391
Query: 303 AELIFN------------------------RLTEANSISYNSMIKGYAVYGQVDDSKRLF 338
I N N + N+ + YA G + + R+F
Sbjct: 392 EVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVF 451
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
+ +++ S WN++I GY Q++ +L Y M+ +
Sbjct: 452 CSIRSKTVNS-----------------WNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDL 494
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
T L ACS + SL+ G+ +H +++ E + +V SL+ +Y CG ++ A F +
Sbjct: 495 FTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDA 554
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ + +W ++NGY +G A+ LF M+ + P + + V AC +
Sbjct: 555 MEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACS----LLPS 610
Query: 519 MKIFRSMKSYGVVPTLEHYT----CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+++ R Y + LE V+D+ ++G + E+ + + E W A++
Sbjct: 611 LRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLK-ERSVASWNAMV 668
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 170/391 (43%), Gaps = 30/391 (7%)
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
++++L + ++ Y C D+ VF + KK++ W +IS Y+++ + L++F
Sbjct: 115 NDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRN-ELYHNVLEMFVK 173
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M +P+ +TF V++ACA + G VHGL++K D + AL+ FY
Sbjct: 174 MITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNG 233
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS-ISYNSMIK--- 323
+ A+RV+ + L + NS+I G E+ L+ ++ E + I++ +
Sbjct: 234 SVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLA 293
Query: 324 --------------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME--------R 361
G V+G E + + +++ + + I + + +
Sbjct: 294 TVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNK 353
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL--GSLQQGQL 419
N V+WN+M+ G+ K L M D ++L C L +
Sbjct: 354 NVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKE 413
Query: 420 LHAHLVKTPF-ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
LH + +K F +N V + V Y++CGS++ A F SI S V +W AL+ GYS
Sbjct: 414 LHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSS 473
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
++ + M ++P+ T +LSAC
Sbjct: 474 DPRLSLDAYFQMKSSGLLPDLFTVCSLLSAC 504
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 30/227 (13%)
Query: 298 GRIEDAEL---IFNRLTEANSISYNSM-----IKGYAVYGQVDDSKRLFEKMPHRSIISL 349
GR +D +L I ++E+ +S + + I Y++ G DDS+ +F+ +
Sbjct: 92 GRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDAL-------- 143
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHAC 408
++N WN++IS Y +N L+ L++++ M + + TF + AC
Sbjct: 144 ---------RKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKAC 194
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ + +Q G +H +VKT +V+V +LV Y GS++DA F + N+ +W
Sbjct: 195 AGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWN 254
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQD----IVPNAATFVGVLSACVR 511
+++ +S +GL E LL M+E+D P+ AT VL C R
Sbjct: 255 SMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCAR 301
>gi|345505210|gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
Length = 588
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 283/531 (53%), Gaps = 66/531 (12%)
Query: 179 KDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+D +W +I ++ VD ++AL F M E+G ++ ++++ V++AC+RLG EG
Sbjct: 59 EDPFLWNAVIKSHSHGVDP-KRALIWFCLMLENGVSV-DKFSLSLVLKACSRLGFVQEGM 116
Query: 239 VVHGLLIKCGFEFDESIGGALIEFY--CGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
+HG L K G D + LI Y CGC F A +++DR+ + NS+I+G +
Sbjct: 117 QIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGF--ARQIFDRMPQRDSVSYNSMIDGYVK 174
Query: 297 MGRIEDAELIFN----------------------------------RLTEANSISYNSMI 322
G I A +F+ + E + IS+NS+I
Sbjct: 175 CGLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLI 234
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNS 368
GY +G+++D+K LF MP R +++ TMI ++ R+ V +NS
Sbjct: 235 DGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNS 294
Query: 369 MISGYVQNNLHEKALQLYMTMRK---LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
M++GYVQN + +AL+++ M K L+ D T T ++ A + LG L + +H ++V
Sbjct: 295 MMAGYVQNKYNMEALEIFSDMEKESHLSPDET--TLVIVLSAIAQLGRLSKAMDMHLYIV 352
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
+ F +G +L+DMYS+CGSI A F I + ++ W A++ G + HGLG A
Sbjct: 353 EKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIENKSIDHWNAMIGGLAIHGLGESA-- 410
Query: 486 LFEIMLE---QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVV 541
F+++LE + I P+ TFVG+L+AC +GLV EG+ F M + + + P L+HY C+V
Sbjct: 411 -FDMLLEIERRSIKPDDITFVGILNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 469
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
D+L RSG + A+ I++MP+E + V+W L+AC E GE A+ + S
Sbjct: 470 DILSRSGSIELAKNLIEEMPMEPNDVIWRTFLTACSHHKEFETGEVVAKHLILQAGYNPS 529
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
+YV+LSN+YA G W +R + E++K PGCSWIEL+ RVH F V+
Sbjct: 530 SYVLLSNMYASFGMWKDARRVRTMMKERELQKVPGCSWIELDGRVHEFFVD 580
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 194/427 (45%), Gaps = 28/427 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +FD+MP R VS+N+M+ GY K + L M + L ++++++
Sbjct: 145 GCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNL--ISWNSMI 202
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S AQ + DG I + E + L+ Y +E+AK +F + + +
Sbjct: 203 SGYAQTS---DGVNIASKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVV 259
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY + + A +F +MP +DVV + +++GY ++ E AL++F M +
Sbjct: 260 TWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNKYNME-ALEIFSDMEKE 318
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T V+ A A+LG + +H +++ F +G ALI+ Y C +
Sbjct: 319 SHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQ 378
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDA----ELIFNRLTEANSISYNSMIKGYAV 327
AM V++R+EN ++ N++I GL G E A I R + + I++ ++ +
Sbjct: 379 AMLVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLEIERRSIKPDDITFVGILNACSH 438
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G V + FE M + I P ++ + M+ ++ E A L
Sbjct: 439 SGLVKEGLLCFELMRRKHKIE--------PRLQH----YGCMVDILSRSGSIELAKNLIE 486
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRC 446
M D TF ACS + G+++ HL+ + + + YV L +MY+
Sbjct: 487 EMPMEPNDVIWRTF---LTACSHHKEFETGEVVAKHLILQAGYNPSSYV--LLSNMYASF 541
Query: 447 GSINDAQ 453
G DA+
Sbjct: 542 GMWKDAR 548
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 65/255 (25%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW-----AK--FD- 66
E ++S N I ++G++ A++LF MP R VV+W TM+ GY+K AK FD
Sbjct: 224 EKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQ 283
Query: 67 -----------------------ESLSLVSTMHR-SNVKLNETTFSTILSVCAQLNSLID 102
E+L + S M + S++ +ETT +LS AQL L
Sbjct: 284 MPHRDVVAYNSMMAGYVQNKYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSK 343
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQ 162
+H +++ + +G L+ Y+ C I++A VF+ + + W+ M+ G
Sbjct: 344 AMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIENKSIDHWNAMIGGLAI 403
Query: 163 CNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFD 222
L AFD+ +++ ++ + P++ TF
Sbjct: 404 HGLGESAFDMLLEIERRSI---------------------------------KPDDITFV 430
Query: 223 SVIRACARLGAFCEG 237
++ AC+ G EG
Sbjct: 431 GILNACSHSGLVKEG 445
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 12/167 (7%)
Query: 420 LHAHLVKTPFESNVYVGTSLV-----------DMYSRCGSINDAQASFSSISSPNVAAWT 468
+ A L+KT F N + T +V ++RC N SF+ + W
Sbjct: 6 IXARLIKTGFIXNSNLTTRIVLAFAASRRPYLAEFARCVFQNYHSCSFAHGEVEDPFLWN 65
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
A++ +SH A++ F +MLE + + + VL AC R G V EGM+I ++
Sbjct: 66 AVIKSHSHGVDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFVQEGMQIHGFLRKT 125
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G+ L C++ L + G L A + MP + D+V + +++
Sbjct: 126 GIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMP-QRDSVSYNSMIDG 171
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/560 (30%), Positives = 292/560 (52%), Gaps = 48/560 (8%)
Query: 135 IEEAKRVFDEL-HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
I A+R+FD H D+ L + M+ YV S++F
Sbjct: 36 IVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESF----------------------- 72
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
L+R +R + P+ +TF + ++CA A EG+ +H ++ GF D
Sbjct: 73 ---------ALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDL 123
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
AL++ Y D A +++D + + + +LI G + G +++A +F+++ E
Sbjct: 124 YAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEK 183
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------------SVIPEM- 359
+S ++N+MI Y G + +++LF++MP RS++S MI S+ M
Sbjct: 184 DSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMP 243
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL-AIDRTRSTFSVLFHACSCLGSLQQGQ 418
E+N +WN+MISGY QN +AL+L+ M+ +++ T + A + LG+L G
Sbjct: 244 EKNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGG 303
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H + + + VGT+L+DMY++CG I ++ F ++ A+W AL+N ++ +G
Sbjct: 304 WVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAING 363
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
EA+ LF M + +PN T +GVLSAC +GLV EG + F++M+ +G+ P +EHY
Sbjct: 364 RAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEEFGLTPKIEHYG 423
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
C+VDLLGR+G L EAE+ ++ MP E + ++ + L AC + ++ ER ++ ++
Sbjct: 424 CMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAW 483
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
Y++L N+YA +W + +++ + VKK+ GCS IE++SRV F DR +P
Sbjct: 484 NDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPK 543
Query: 659 CNVIYATLEHLTANLNSVVL 678
I++ L L ++ L
Sbjct: 544 WEAIHSVLGQLWVHMKGTRL 563
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 169/420 (40%), Gaps = 90/420 (21%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ AR LFD+M R+ VSW ++ GY + D + L M I
Sbjct: 137 GKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM--------------IE 182
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
A N++ID Y ++ A+++FDE+ E + +
Sbjct: 183 KDSAAFNTMIDA-------------------------YVKLGDMCSARKLFDEMPERSVV 217
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W++M+ GY + A +F MP+K++ W +ISGY ++ E ALKLF M+ +
Sbjct: 218 SWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYRQNKQPYE-ALKLFHEMQST 276
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T SV+ A A LGA G VH + + + ++G ALI+ Y C
Sbjct: 277 TSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKC----- 331
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
G I + +F+ + E + S+N++I +A+ G+
Sbjct: 332 --------------------------GEIVKSRGVFDNMPEKETASWNALINAFAINGRA 365
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
++ LF +M H+ + N +T ++S + L E+ + + M +
Sbjct: 366 KEALGLFMEMNHKGFMP-------------NEITMIGVLSACNHSGLVEEGKRWFKAMEE 412
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+ + + G LQ+ + L + P+E+N G L CG D
Sbjct: 413 FGLTPKIEHYGCMVDLLGRAGCLQEAEKL---MESMPYEAN---GIILSSFLFACGYSKD 466
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 104/226 (46%), Gaps = 36/226 (15%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS I NG L +AR+LFD MP + + SWN M+ GY + + E+L L
Sbjct: 213 ERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYRQNKQPYEALKLFHE 272
Query: 75 MHRS-NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M + +++ +E T ++L A L +L G +H V + + VG+ L+ YA C
Sbjct: 273 MQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCG 332
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
EI +++ VFD MP+K+ W LI+ +A
Sbjct: 333 EIVKSRGVFD-------------------------------NMPEKETASWNALINAFA- 360
Query: 194 SVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
++G ++AL LF M G MPNE T V+ AC G EGK
Sbjct: 361 -INGRAKEALGLFMEMNHKG-FMPNEITMIGVLSACNHSGLVEEGK 404
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 181/573 (31%), Positives = 291/573 (50%), Gaps = 88/573 (15%)
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC------ 163
VLKSGY+ +V +G+L YA IE A+++FDE+ + W++M+ GY +C
Sbjct: 53 VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEA 112
Query: 164 ----NLMSD-------------------------AFDVFIKMPKKDVVVWTKLISGYAKS 194
++M D A F KMP++ VV W ++SGYA+
Sbjct: 113 STLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQG 172
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK-VVHGLLIKCGFEFDE 253
E+ ++LF M G P+E T+ +VI +C+ LG C + +V L K GF +
Sbjct: 173 -GAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNY 231
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
+ AL++ + C + A +++++L
Sbjct: 232 FVKTALLDMHAKCGNLEAAHKIFEQL----------------------------GVYKYR 263
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
+S+ +N+MI YA G + +K LF+KMP +R+ V+WNSMI+GY
Sbjct: 264 SSVPWNAMISAYARVGDLPSAKHLFDKMP-----------------QRDTVSWNSMIAGY 306
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRS--TFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
QN KA++L+ M R T +F AC LG L G + L +
Sbjct: 307 TQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQI 366
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
++ V SL++MYSRCGS+ DA F +++ ++ ++ L++G++ HG G E++ L M
Sbjct: 367 SISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMK 426
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
E I P+ T++ +L+AC AGL++EG ++F S+K P ++HY C++D+LGR+G L
Sbjct: 427 EDGIEPDRITYIAILTACSHAGLLDEGQRLFESIK----FPDVDHYACMIDMLGRAGRLE 482
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
EA + I+ MP+E A ++G+LL+A +E+GE AA K+F ++ Y +LSNIYA
Sbjct: 483 EAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYA 542
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
G+W + +R + VKK G SW+E NS
Sbjct: 543 SAGRWKEGDKVRDTMRKQGVKKTTGLSWLEHNS 575
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 218/464 (46%), Gaps = 34/464 (7%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-H 76
+++ IT + G L TAR FD+MP R+VVSWN ML GY++ +E++ L + M
Sbjct: 128 VITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLS 187
Query: 77 RSNVKLNETTFSTILSVCAQL-NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
NV+ +ETT++T++S C+ L + + + L K G+ FV + LL +A C +
Sbjct: 188 PGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNL 247
Query: 136 EEAKRVFDEL---HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
E A ++F++L + + W+ M+ Y + + A +F KMP++D V W +I+GY
Sbjct: 248 EAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYT 307
Query: 193 KSVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
++ + KA+KLF M S ++ P+E T SV AC LG G +L +
Sbjct: 308 QNGESF-KAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQI 366
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR-IEDAELIFNRL 310
S+ +LI Y C + A+ ++ + L + N+LI+G G +E EL+
Sbjct: 367 SISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMK 426
Query: 311 ---TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
E + I+Y +++ + G +D+ +RLFE + + MI ++ R
Sbjct: 427 EDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKFPDVDHYACMIDMLGRAGR------ 480
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
E+A++L +M ++ + L +A S ++ G+L A L K
Sbjct: 481 -----------LEEAMKLIQSM---PMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKV 526
Query: 428 -PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
P S Y L ++Y+ G + ++ V T L
Sbjct: 527 EPHNSGNYA--LLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGL 568
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
M+ Y Q +H Q+++++ K + + F++ + + L AH++K+
Sbjct: 1 MLKYYSQIGVHS---QVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLAHVLKSG 57
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
++ + YV ++ +Y++ G I A+ F + VA W +++GY G EA LF
Sbjct: 58 YDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFH 117
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548
+M +Q+I N T+ +++ + G + F M VV + ++ + G
Sbjct: 118 VMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVS----WNAMLSGYAQGG 173
Query: 549 HLHEAEEFIKDM----PIELDAVVWGALLSAC 576
E DM ++ D W ++S+C
Sbjct: 174 APEETIRLFNDMLSPGNVQPDETTWATVISSC 205
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 271/512 (52%), Gaps = 26/512 (5%)
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
+F + +K+VV + +I Y + E AL +F+ M N P+ YTF V++AC+ L
Sbjct: 93 IFDRSLEKNVVFFNVMIRSYVNNNLYVE-ALSIFQVMLSCAFN-PDHYTFPCVLKACSGL 150
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
G VH ++K G + + IG AL+ Y C A +V D++ + + NS++
Sbjct: 151 DNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMV 210
Query: 292 NGLISMGRIEDAELI------FNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
G G+ +DA I N +A +++ S + Y V +FE+M ++
Sbjct: 211 AGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKN 270
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
+IS WN MI+ YV N++ +A+ L++ M + + T + L
Sbjct: 271 LIS-----------------WNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
AC L +L G+ LH ++ K N+ + +L+DMY++CG + +A+ F + +V
Sbjct: 314 PACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVV 373
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
+WT++M+ Y G G +AV LF ML+ P++ FV VLSAC GL+++G FR M
Sbjct: 374 SWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMM 433
Query: 526 -KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
+ YG+VP +EH+ C+VDL GR+G + EA FIK MP+E + VWGALLSAC M++
Sbjct: 434 TEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDI 493
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
G AA +F L K YV+LSNIYA G W M++R + + +KK PG S +ELN
Sbjct: 494 GLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNG 553
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+VH F D+ +P IY L+ L + +
Sbjct: 554 QVHTFLAGDQYHPQAKNIYGELDVLVGKMKEL 585
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/487 (22%), Positives = 211/487 (43%), Gaps = 66/487 (13%)
Query: 8 SQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDE 67
++ L TL + +A + G+ AR +FD+ + VV +N M+ Y + E
Sbjct: 64 NEHLRIDPTLAIKLMRAYSA---QGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVE 120
Query: 68 SLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLF 127
+LS+ M + TF +L C+ L++L G Q+H ++K G + F+G+ L+
Sbjct: 121 ALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVA 180
Query: 128 FYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV--------------- 172
Y C + EA++V D++ + + W+ M+ GY Q DA ++
Sbjct: 181 MYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGT 240
Query: 173 ----------------------FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
F +M KK+++ W +I+ Y + E A+ LF M E
Sbjct: 241 MASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNE-AVSLFLQMEE 299
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G P+ T S++ AC L A G+ +H + K + + AL++ Y C +
Sbjct: 300 CGMK-PDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLE 358
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYA 326
A V+D++ + + S+++ G+ DA +F ++ ++ +SI++ S++ +
Sbjct: 359 EARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACS 418
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G +D + F M + ++P +E + M+ + + E+A Y
Sbjct: 419 HTGLLDQGRHYFRMMTEQ--------YGIVPRIEH----FACMVDLFGRAGEVEEA---Y 463
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV--KTPFESNVYVGTSLVDMYS 444
++++ ++ + L AC + G L+ A L+ P +S YV L ++Y+
Sbjct: 464 SFIKQMPMEPNERVWGALLSACRVHSKMDIG-LVAADLLFQLAPKQSGYYV--LLSNIYA 520
Query: 445 RCGSIND 451
+ G D
Sbjct: 521 KAGMWKD 527
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 201/667 (30%), Positives = 322/667 (48%), Gaps = 86/667 (12%)
Query: 12 MTQETLIVSTNKAITECGRN--GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL 69
+T ETL + K I+ C + G L A+ +FDQ+P +N+++ GYS +++
Sbjct: 16 LTNETL--TLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAV 73
Query: 70 SLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFY 129
L M S + NE T +L C ++ + +H L +K G FV + L+ Y
Sbjct: 74 LLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVY 133
Query: 130 ANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLIS 189
C I A+++FD++ + K +V W +I
Sbjct: 134 VVCGLIHCARKLFDDITD-------------------------------KTLVSWNSMIG 162
Query: 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF 249
GYA + ++A LFR MRE G P+ +TF +++ C++ G+ VH + G
Sbjct: 163 GYAH-MGNWKEAFLLFRKMREWGME-PDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGV 220
Query: 250 EFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR 309
+ D + AL++ Y C G + A+ IF+R
Sbjct: 221 KIDIIVRNALVDMYAKC-------------------------------GNLHSAQAIFDR 249
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
E N +S+ SMI YA +G ++ ++++F++MP +N V+WNSM
Sbjct: 250 TQEKNVVSWTSMISAYAQHGSIEVARQIFDQMP-----------------GKNVVSWNSM 292
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
IS Y++ + +AL L+ MR + +T + ACS LG L G+ +H +++
Sbjct: 293 ISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKG 352
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
V + SL+DMY++CG + A F + N+ +W ++ + HG G EA+ LFE
Sbjct: 353 AYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEE 412
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT-LEHYTCVVDLLGRSG 548
M +P+ T G+LSAC +GLV+ G+ F M VP +EHY C+VDLLGR G
Sbjct: 413 MQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGG 472
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L EA E I MP++ D VVWGALL AC N+E+G++ +++ L+ YV++SN
Sbjct: 473 LLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISN 532
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
IY +W IRK + +KK S IE++ ++ F V+D+ + + IYA L+
Sbjct: 533 IYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQ 592
Query: 669 LTANLNS 675
LT +L S
Sbjct: 593 LTDHLRS 599
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 115/231 (49%), Gaps = 35/231 (15%)
Query: 3 LYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKW 62
L++ Q+ TQE +VS I+ ++G + AR +FDQMP + VVSWN+M+ Y +
Sbjct: 240 LHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLRE 299
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
++ E+L L + M S V +E T +IL+ C+QL L+ GK+IH +L + +
Sbjct: 300 GQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLY 359
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ L+ YA C + A D+F++MP K++V
Sbjct: 360 NSLIDMYAKCGPVVTA-------------------------------LDIFLEMPGKNLV 388
Query: 183 VWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
W +I A ++ GC +A+KLF M+ G +P+E T ++ AC+ G
Sbjct: 389 SWNVIIG--ALALHGCGLEAIKLFEEMQADG-TLPDEITLTGLLSACSHSG 436
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 160/334 (47%), Gaps = 24/334 (7%)
Query: 303 AELIFNRLTEANSISYNSMIKGYAV--YGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
A++I + LT +++ +I AV G + ++R+F+++P +
Sbjct: 9 AQIILHGLTN-ETLTLGKLISFCAVDDAGDLQYAQRMFDQIP-----------------Q 50
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
N +NS+I GY ++ A+ L+ M + T + AC C + + L+
Sbjct: 51 PNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLV 110
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H +K S V+V +L+ +Y CG I+ A+ F I+ + +W +++ GY+H G
Sbjct: 111 HGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNW 170
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
EA LLF M E + P+ TFV +LS C ++ ++ G + ++ GV + +
Sbjct: 171 KEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNAL 230
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
VD+ + G+LH A+ I D E + V W +++SA ++EV + +M G K +
Sbjct: 231 VDMYAKCGNLHSAQA-IFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPG---KNV 286
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
++ + + Y G++ + +D+ ++ + V D
Sbjct: 287 VSWNSMISCYLREGQYREALDLFNKMRNSRVVPD 320
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 265/488 (54%), Gaps = 23/488 (4%)
Query: 212 GENMPNEYTF-DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G +P + F +++++ C +G++VH +++ F D +G L+ Y C + +
Sbjct: 53 GSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLE 112
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYA 326
A +V++++ +LI+G R DA L FN++ N + +S+IK A
Sbjct: 113 EARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
Query: 327 VYGQVDDSKRL--------FEKMPH--RSIISLNTMISVIPEME--------RNPVTWNS 368
+ +L F+ H +++ L T ++ + + RN V+WN+
Sbjct: 173 AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNA 232
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
+I+G+ + + EKAL+L+ M + + +++ LF ACS G L+QG+ +HA+++K+
Sbjct: 233 LIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 292
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
+ + G +L+DMY++ GSI+DA+ F ++ +V +W +L+ Y+ HG G EAV FE
Sbjct: 293 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 352
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548
M I PN +F+ VL+AC +GL++EG + MK G+VP HY VVDLLGR+G
Sbjct: 353 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAG 412
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L+ A FI++MPIE A +W ALL+AC N E+G AA+ +F LD +VIL N
Sbjct: 413 DLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYN 472
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
IYA G+W +RK++ VKK+P CSW+E+ + +H F D +P I E
Sbjct: 473 IYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEE 532
Query: 669 LTANLNSV 676
+ A + +
Sbjct: 533 VLAKIKEL 540
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 203/493 (41%), Gaps = 91/493 (18%)
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S + + ++T+L C LI G+ +H +L+S + +G+ LL YA C +EE
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++ VF KMP++D V WT LISGY++
Sbjct: 114 ARK-------------------------------VFEKMPQRDFVTWTTLISGYSQHDRP 142
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
C+ AL F M G + PNE+T SVI+A A C G +HG +KCGF+ + +G
Sbjct: 143 CD-ALLFFNQMLRFGYS-PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGS 200
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EA 313
AL++ Y D A V+D LE+ + N+LI G E A +F +
Sbjct: 201 ALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRP 260
Query: 314 NSISY-----------------------------------NSMIKGYAVYGQVDDSKRLF 338
+ SY N+++ YA G + D++++F
Sbjct: 261 SHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF 320
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
+++ R ++S WNS+++ Y Q+ ++A+ + MR++ I
Sbjct: 321 DRLAKRDVVS-----------------WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
+F + ACS G L +G + + K + ++VD+ R G +N A
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423
Query: 459 IS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
+ P A W AL+N H E + E D + V + + G N+
Sbjct: 424 MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELD-PDDPGPHVILYNIYASGGRWND 482
Query: 518 GMKIFRSMKSYGV 530
++ + MK GV
Sbjct: 483 AARVRKKMKESGV 495
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 193/444 (43%), Gaps = 64/444 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV N + + G L AR +F++MP R V+W T++ GYS+ + ++L + M R
Sbjct: 95 IVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
NE T S+++ A G Q+H +K G++ VGS LL Y +++
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VFD L N++ W+ LI+G+A+ G
Sbjct: 215 AQLVFDALESRNDVSWN-------------------------------ALIAGHARR-SG 242
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
EKAL+LF+ M G P+ +++ S+ AC+ G +GK VH +IK G + G
Sbjct: 243 TEKALELFQGMLRDGFR-PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EA 313
L++ Y + A +++DRL + + NSL+ G ++A F +
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
N IS+ S++ + G +D+ +E M I+ P W+ Y
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV---------------PEAWH-----Y 401
Query: 374 VQ-NNLHEKALQLYMTMR---KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TP 428
V +L +A L +R ++ I+ T + + L +AC + + G H+ + P
Sbjct: 402 VTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDP 461
Query: 429 FESNVYVGTSLVDMYSRCGSINDA 452
+ +V L ++Y+ G NDA
Sbjct: 462 DDPGPHV--ILYNIYASGGRWNDA 483
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 184/615 (29%), Positives = 301/615 (48%), Gaps = 58/615 (9%)
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
VK N TF +L+ ++L GK IH V +S + FV + L+
Sbjct: 6 VKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVN------------ 53
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
Y +C ++DA VF MP + V W +IS Y+ S E
Sbjct: 54 -------------------TYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGE 94
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
A +F+ M+ GE + TF S++ AC GK V + + FE D +G AL
Sbjct: 95 -AFFIFQRMQHEGERC-DRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTAL 152
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANS 315
I Y C + + A +V+ R++ L +++I G +A F + + N
Sbjct: 153 ITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNR 212
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------------VI 356
+++ S++ G+ +++ R+ + + TM + ++
Sbjct: 213 VTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVIL 272
Query: 357 PEMERNPVT-WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
EM+ +T WN +I+GY + +AL+ Y ++ AI + TF + +AC+ SL
Sbjct: 273 QEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLA 332
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
+G+++H++ V+ +S+V V +L +MYS+CGS+ +A+ F S+ + +W ++ Y+
Sbjct: 333 EGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYA 392
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTL 534
HG E + L M ++ + N TFV VLS+C AGL+ EG + F S+ G+
Sbjct: 393 QHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKT 452
Query: 535 EHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFG 594
EHY C+VDLLGR+G L EAE++I MP E + V W +LL AC +++ G+ AA+K+
Sbjct: 453 EHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLE 512
Query: 595 LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
LD SA V+LSNIY+ G W +R+ + VKK PG S I++ ++VH F V D
Sbjct: 513 LDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDT 572
Query: 655 NNPNCNVIYATLEHL 669
++P IY +E L
Sbjct: 573 SHPRAAEIYDKVEEL 587
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 131/538 (24%), Positives = 218/538 (40%), Gaps = 100/538 (18%)
Query: 13 TQETLIVSTNKAI----TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES 68
++ +L V N A+ T+CG L AR +FD MP R+V +WN+M+ YS + E+
Sbjct: 39 SEHSLDVFVNTALVNTYTKCG---SLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEA 95
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
+ M + + TF +IL C +L GK + + ++ +E FVG+ L+
Sbjct: 96 FFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITM 155
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
YA C E A +VF + + N ++ W+ +I
Sbjct: 156 YARCRSPENAAQVFGRMKQKN-------------------------------LITWSAII 184
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
+ +A C +AL+ FR M++ G +PN TF S++ E +H L+ + G
Sbjct: 185 TAFADH-GHCGEALRYFRMMQQEG-ILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHG 242
Query: 249 FEFDESIGGALIEFYCGCEA--FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
+ ++ AL+ Y CE D A + ++ + A N LING GR +A
Sbjct: 243 LDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALET 302
Query: 307 FNRL-------------------TEANSISYNSMIKGYAVY------------------- 328
+ RL T + S++ MI AV
Sbjct: 303 YQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSK 362
Query: 329 -GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G +++++R+F+ MP RS +S WN M+ Y Q+ E+ L+L
Sbjct: 363 CGSMENARRIFDSMPIRSAVS-----------------WNGMLQAYAQHGESEEVLKLIR 405
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
M + + TF + +CS G + +G Q H+ E LVD+ R
Sbjct: 406 KMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRA 465
Query: 447 GSINDAQASFSSI-SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
G + +A+ S + S P + W +L+ H L +LE D ++A+ V
Sbjct: 466 GKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVV 523
>gi|224103137|ref|XP_002312939.1| predicted protein [Populus trichocarpa]
gi|222849347|gb|EEE86894.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 197/664 (29%), Positives = 324/664 (48%), Gaps = 100/664 (15%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
NK I+ +NG++ AR LFDQM VSWN ++ Y K + ++ L M + ++
Sbjct: 1 NKKISNLAKNGRIDEARALFDQMEETNTVSWNAIIRAYVKRREIAKARKLFDEMPQRDI- 59
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
N +I G + C G+ F ++E + +
Sbjct: 60 -------------VSWNLMISG-YVSC--------------HGIRF-------LKEGRNL 84
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
FD + E + + W+ M+ GY + M +A +F MP+ DVV W +++G+ ++ D +A
Sbjct: 85 FDRMPERDIVSWNTMISGYAKNGRMDEALRMFKLMPEGDVVSWNAIVTGFLQNGD-VARA 143
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG-----FEFDESIG 256
++ F E MP R A L A G + +G L + FE D G
Sbjct: 144 IEYF-------ERMPE--------RDAASLSALVSGLIRNGELDEAARVVVRFERD---G 185
Query: 257 G----------ALIEFYCGCEAFDGAMRVYDRLE-------------NPCLNASNSLING 293
G LI Y + D A +++D++ + + N++I
Sbjct: 186 GRKENLLQAYNTLIAGYGRRDRVDEARKLFDQIPFCDGKGKGGDGRFGRNVVSWNTMIMC 245
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
+ G I A +F+++ E ++IS+N+MI GY +D++ RLF +MP+ I S N MI
Sbjct: 246 YVKAGNIVFARELFDQMMERDTISWNTMISGYVNMLDMDEASRLFCEMPNPDIFSWNKMI 305
Query: 354 ---SVIPEMER-----------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+ I +++R N V+WNS+I+GY +N+ + A+++++ M+ R
Sbjct: 306 AGHAQIGDLDRVNDLFGRMPQKNLVSWNSVITGYEKNDDYIGAIKIFIQMQVEGEKPDRH 365
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T S + + + LQ G +H + KT +V + +L+ MYSRCG+I +A F +
Sbjct: 366 TLSSVLSVSAGIVDLQLGMQIHQLVTKTVI-PDVPINNALITMYSRCGAIIEAGTIFDEV 424
Query: 460 S-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
V +W A++ GY+ HG EA+ +F++M D+ P TF+ VL AC AGLV EG
Sbjct: 425 KLQKEVISWNAMIGGYASHGYAVEALEVFKLMKSFDVRPTHITFISVLHACAHAGLVEEG 484
Query: 519 MKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
+IF SM +G+ P++EHY +VD++ R G L +A + I MP E D VWGALLSA
Sbjct: 485 REIFESMADEFGIEPSVEHYASLVDIMSRHGQLEQALDLINSMPFEPDKAVWGALLSAAK 544
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
+EV AA+ + L+ + YV+L N+YA +G+W ++R + +KK
Sbjct: 545 VHNKIEVARVAAEALIRLEPDSSAPYVLLYNMYADVGQWDSAAEVRIMMERSNIKKQAAY 604
Query: 638 SWIE 641
SW++
Sbjct: 605 SWVD 608
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 134/325 (41%), Gaps = 44/325 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I S NK I + G L +LF +MP + +VSWN+++ GY K + ++ + M
Sbjct: 298 IFSWNKMIAGHAQIGDLDRVNDLFGRMPQKNLVSWNSVITGYEKNDDYIGAIKIFIQMQV 357
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
K + T S++LSV A + L G QIH LV K+ + + L+ Y+ C I E
Sbjct: 358 EGEKPDRHTLSSVLSVSAGIVDLQLGMQIHQLVTKTVIPDVP-INNALITMYSRCGAIIE 416
Query: 138 AKRVFDELHEDNELL-WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A +FDE+ E++ W+ M+ GY +A +VF M DV
Sbjct: 417 AGTIFDEVKLQKEVISWNAMIGGYASHGYAVEALEVFKLMKSFDV--------------- 461
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK-VVHGLLIKCGFEFDESI 255
P TF SV+ ACA G EG+ + + + G E
Sbjct: 462 ------------------RPTHITFISVLHACAHAGLVEEGREIFESMADEFGIEPSVEH 503
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNA------SNSLINGLISMGRIEDAELIFNR 309
+L++ + A+ + + + A S + ++ I + R+ LI R
Sbjct: 504 YASLVDIMSRHGQLEQALDLINSMPFEPDKAVWGALLSAAKVHNKIEVARVAAEALI--R 561
Query: 310 LTEANSISYNSMIKGYAVYGQVDDS 334
L +S Y + YA GQ D +
Sbjct: 562 LEPDSSAPYVLLYNMYADVGQWDSA 586
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/573 (31%), Positives = 291/573 (50%), Gaps = 88/573 (15%)
Query: 110 VLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC------ 163
VLKSGY+ +V +G+L YA IE A+++FDE+ + W++M+ GY +C
Sbjct: 110 VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEA 169
Query: 164 ----NLMSD-------------------------AFDVFIKMPKKDVVVWTKLISGYAKS 194
++M D A F KMP++ VV W ++SGYA+
Sbjct: 170 STLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQG 229
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK-VVHGLLIKCGFEFDE 253
E+ ++LF M G P+E T+ +VI +C+ LG C + +V L K GF +
Sbjct: 230 -GAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNY 288
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
+ AL++ + C + A +++++L
Sbjct: 289 FVKTALLDMHAKCGNLEAAHKIFEQL----------------------------GVYKYR 320
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
+S+ +N+MI YA G + +K LF+KMP +R+ V+WNSMI+GY
Sbjct: 321 SSVPWNAMISAYARVGDLPSAKHLFDKMP-----------------QRDTVSWNSMIAGY 363
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRS--TFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
QN KA++L+ M R T +F AC LG L G + L +
Sbjct: 364 TQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQI 423
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
++ V SL++MYSRCGS+ DA F +++ ++ ++ L++G++ HG G E++ L M
Sbjct: 424 SISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMK 483
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLH 551
E I P+ T++ +L+AC AGL++EG ++F S+K P ++HY C++D+LGR+G L
Sbjct: 484 EDGIEPDRITYIAILTACSHAGLLDEGQRLFESIK----FPDVDHYACMIDMLGRAGRLE 539
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
EA + I+ MP+E A ++G+LL+A +E+GE AA K+F ++ Y +LSNIYA
Sbjct: 540 EAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYA 599
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
G+W + +R + VKK G SW+E NS
Sbjct: 600 SAGRWKEGDKVRDTMRKQGVKKTTGLSWLEHNS 632
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 218/464 (46%), Gaps = 34/464 (7%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-H 76
+++ IT + G L TAR FD+MP R+VVSWN ML GY++ +E++ L + M
Sbjct: 185 VITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLS 244
Query: 77 RSNVKLNETTFSTILSVCAQL-NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
NV+ +ETT++T++S C+ L + + + L K G+ FV + LL +A C +
Sbjct: 245 PGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNL 304
Query: 136 EEAKRVFDEL---HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
E A ++F++L + + W+ M+ Y + + A +F KMP++D V W +I+GY
Sbjct: 305 EAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYT 364
Query: 193 KSVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
++ + KA+KLF M S ++ P+E T SV AC LG G +L +
Sbjct: 365 QNGESF-KAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQI 423
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR-IEDAELIFNRL 310
S+ +LI Y C + A+ ++ + L + N+LI+G G +E EL+
Sbjct: 424 SISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMK 483
Query: 311 ---TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
E + I+Y +++ + G +D+ +RLFE + + MI ++ R
Sbjct: 484 EDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKFPDVDHYACMIDMLGRAGRL----- 538
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
E+A++L +M ++ + L +A S ++ G+L A L K
Sbjct: 539 ------------EEAMKLIQSM---PMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKV 583
Query: 428 -PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
P S Y L ++Y+ G + ++ V T L
Sbjct: 584 EPHNSGNYA--LLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGL 625
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
M+ Y Q +H Q+++++ K + + F++ + + L AH++K+
Sbjct: 58 MLKYYSQIGVHS---QVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLAHVLKSG 114
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
++ + YV ++ +Y++ G I A+ F + VA W +++GY G EA LF
Sbjct: 115 YDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFH 174
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548
+M +Q+I N T+ +++ + G + F M VV + ++ + G
Sbjct: 175 VMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVS----WNAMLSGYAQGG 230
Query: 549 HLHEAEEFIKDM----PIELDAVVWGALLSAC 576
E DM ++ D W ++S+C
Sbjct: 231 APEETIRLFNDMLSPGNVQPDETTWATVISSC 262
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/676 (27%), Positives = 323/676 (47%), Gaps = 67/676 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
GQL AR +FD++P ++N ++ YS F ++ L +M R V N+ TF +L
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ L L G+ IH +G FV + L+ Y C A+ VF ++ + +
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ML GY + A + M++
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLD--------------------------------MQDH 195
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES---IGGALIEFYCGCEA 268
G PN T S++ A+ GA +G +H ++ E +E IG AL++ Y C+
Sbjct: 196 GGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQ 255
Query: 269 FDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRL-------TEANSIS-- 317
A RV+ + P N ++LI G + R+ +A +F + A S++
Sbjct: 256 LVYACRVFHGM--PVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASA 313
Query: 318 ---------------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME-R 361
+++I ++ + S L +I+ TM E+ +
Sbjct: 314 LRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMF--FDEIAVK 371
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
+ +++ +++SG VQN E+A ++ M+ ++ +T L ACS L +LQ G+ H
Sbjct: 372 DTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSH 431
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
++ + SL+DMY++CG I+ ++ F + + +V +W ++ GY HGLG
Sbjct: 432 GSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGK 491
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCV 540
EA LF M Q P+ TF+ +++AC +GLV EG F +M YG++P +EHY C+
Sbjct: 492 EATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICM 551
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600
VDLL R G L EA +FI+ MP++ D VWGALL AC N+++G++ ++ + L +
Sbjct: 552 VDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGT 611
Query: 601 SAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCN 660
+V+LSNI++ G++ + ++R KK PG SWIE+N +HAF D+++P
Sbjct: 612 GNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSR 671
Query: 661 VIYATLEHLTANLNSV 676
IY L+++ ++ +
Sbjct: 672 DIYHELDNIMVDIKKL 687
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 105/237 (44%), Gaps = 36/237 (15%)
Query: 5 ATQSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
TQ L+ + + + ++N ++ + G + A FD++ ++ +S+ +L G +
Sbjct: 326 GTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQ 385
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
K +E+ + M N++ + T +++ C+ L +L GK H V+ G +
Sbjct: 386 NGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI 445
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+ L+ YA C +I+ +++VFD++ + + W+ M+ GY L +A +F+ M +
Sbjct: 446 CNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQ-- 503
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
G+A P++ TF +I AC+ G EGK
Sbjct: 504 --------GFA-----------------------PDDVTFICLIAACSHSGLVTEGK 529
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/679 (27%), Positives = 324/679 (47%), Gaps = 73/679 (10%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
GQL AR +FD++P ++N ++ YS F ++ L +M R V N+ TF +L
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ L L G+ IH +G FV + L+ Y C A+ VF ++ + +
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ML GY + A + M++
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLD--------------------------------MQDH 195
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES---IGGALIEFYCGCEA 268
G PN T S++ A+ GA +G +H ++ E +E IG AL++ Y C+
Sbjct: 196 GGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQ 255
Query: 269 FDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRL-------TEANSIS-- 317
A RV+ + P N ++LI G + R+ +A +F + A S++
Sbjct: 256 LVYACRVFHGM--PVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASA 313
Query: 318 ---------------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM----ISVIPE 358
+++I ++ + S L +I+ TM I+V
Sbjct: 314 LRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAV--- 370
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
++ +++ +++SG VQN E+A ++ M+ ++ +T L ACS L +LQ G+
Sbjct: 371 --KDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGK 428
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
H ++ + SL+DMY++CG I+ ++ F + + +V +W ++ GY HG
Sbjct: 429 CSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHG 488
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHY 537
LG EA LF M Q P+ TF+ +++AC +GLV EG F +M YG++P +EHY
Sbjct: 489 LGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY 548
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
C+VDLL R G L EA +FI+ MP++ D VWGALL AC N+++G++ ++ + L
Sbjct: 549 ICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGP 608
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
+ +V+LSNI++ G++ + ++R KK PG SWIE+N +HAF D+++P
Sbjct: 609 EGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHP 668
Query: 658 NCNVIYATLEHLTANLNSV 676
IY L+++ ++ +
Sbjct: 669 CSRDIYHELDNIMVDIKKL 687
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 105/237 (44%), Gaps = 36/237 (15%)
Query: 5 ATQSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
TQ L+ + + + ++N ++ + G + A FD++ ++ +S+ +L G +
Sbjct: 326 GTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQ 385
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
K +E+ + M N++ + T +++ C+ L +L GK H V+ G +
Sbjct: 386 NGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI 445
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+ L+ YA C +I+ +++VFD++ + + W+ M+ GY L +A +F+ M +
Sbjct: 446 CNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQ-- 503
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
G+A P++ TF +I AC+ G EGK
Sbjct: 504 --------GFA-----------------------PDDVTFICLIAACSHSGLVTEGK 529
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 277/514 (53%), Gaps = 24/514 (4%)
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
N + A +F + K+ ++ LI G A++ E ++ F M + + P+ TF
Sbjct: 88 NSVDYAISIFQRFELKNSYLFNALIRGLAEN-SRFESSISFFVLMLK-WKISPDRLTFPF 145
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
V+++ A L G+ +H ++K G EFD + +L++ Y E A++V+D
Sbjct: 146 VLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESV 205
Query: 284 LNAS----NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFE 339
N S N LI+G MG + A +F+ + + ++ S+NS+I G+ G + +K LF
Sbjct: 206 KNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFV 265
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
KMP E+N V+W +M++G+ QN EKAL+ + M +
Sbjct: 266 KMP-----------------EKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDY 308
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T AC+ +G+L G +H +L F+ N+ +GT+LVDMY++CG+I A+ F
Sbjct: 309 TIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHET 368
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+ W+ ++ G++ HG +A+ FE M P++ F+ VL+AC +G VNEG+
Sbjct: 369 KEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGL 428
Query: 520 KIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
K F +M+ Y + P+++HYT VVD+LGR+G L EA +FI+ MPI D VVWGAL AC
Sbjct: 429 KFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRT 488
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
N+E+ E A++K+ L+ K +YV LSN YA +G+W +R + KDPG S
Sbjct: 489 HKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWS 548
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHLTAN 672
+IE++ ++H F D + IY+ L+ ++A+
Sbjct: 549 FIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISAS 582
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 214/469 (45%), Gaps = 59/469 (12%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
I+ C + A ++F + ++ +N ++ G ++ ++F+ S+S M + + +
Sbjct: 81 ISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDR 140
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
TF +L A L++ G+ +HC +LK G E FV L+ Y E+ A +VFDE
Sbjct: 141 LTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDE 200
Query: 145 LHEDNE----LLWSLMLVGY-------------------------------VQCNLMSDA 169
E + L+W++++ GY ++ M A
Sbjct: 201 SPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRA 260
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
++F+KMP+K+VV WT +++G++++ D EKAL+ F M E G PN+YT S + ACA
Sbjct: 261 KELFVKMPEKNVVSWTTMVNGFSQNGDP-EKALETFFCMLEEGAR-PNDYTIVSALSACA 318
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNS 289
++GA G +H L GF+ + IG AL++ Y C + A +V+ + L +
Sbjct: 319 KIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSV 378
Query: 290 LINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
+I G G A F + T+ +S+ + +++ + GQV++ + F+ M
Sbjct: 379 MIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGY 438
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
+I P M+ + ++ + ++AL+ +R + I + LF
Sbjct: 439 LIE--------PSMKH----YTLVVDMLGRAGRLDEALKF---IRAMPITPDFVVWGALF 483
Query: 406 HACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGSINDAQ 453
AC +++ +L L++ P YV L + Y+ G +DA+
Sbjct: 484 CACRTHKNVEMAELASKKLLQLEPKHPGSYV--FLSNAYASVGRWDDAE 530
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 19/298 (6%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N I + G + A+ LF +MP + VVSW TM+ G+S+ +++L M
Sbjct: 243 SWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEG 302
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
+ N+ T + LS CA++ +L G +IH + +G++ +G+ L+ YA C IE A+
Sbjct: 303 ARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAE 362
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSV 195
+VF E E L+WS+M+ G+ A F M K D VV+ +++ + S
Sbjct: 363 KVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHS- 421
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDES 254
+ LK F MR P+ + V+ R G E K + + I F
Sbjct: 422 GQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDF----V 477
Query: 255 IGGALIEFYCGC------EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
+ GAL +C C E + A + +LE + L N S+GR +DAE +
Sbjct: 478 VWGAL---FCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERV 532
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/591 (29%), Positives = 309/591 (52%), Gaps = 51/591 (8%)
Query: 125 LLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGY--------------------VQCN 164
L+ FYA C +++E +RVFD + + N LW+ M+ Y ++
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
A ++F K+ +DV+ W +ISGY S E+ L +++ M G ++ + T SV
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYV-SNGLTERGLGIYKQMMYLGIDV-DLATIISV 119
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+ CA+ G GK VH L IK FE + L++ Y C DGA+RV++++ +
Sbjct: 120 LVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 179
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEK 340
+ S+I G G + A ++ ++ + + ++ S++ A G +D+ K + +
Sbjct: 180 VSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHD- 238
Query: 341 MPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI------ 394
I N M S N N+++ Y + E A ++ TM I
Sbjct: 239 -----YIKANNMAS-------NLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTM 286
Query: 395 ----DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
T + + AC+ L +L++G+ +H ++++ + S+ +V +LVD+Y +CG +
Sbjct: 287 VGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLG 346
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
A+ F I S ++ +WT ++ GY HG G+EA+ F M + I P+ +F+ +L AC
Sbjct: 347 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 406
Query: 511 RAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVW 569
+GL+ +G + F MK+ + + P LEHY C+VDLL R+G+L +A +FI+ +PI DA +W
Sbjct: 407 HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIW 466
Query: 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629
GALL C + ++E+ E+ A+++F L+ + YV+L+NIYA KW + +R+++
Sbjct: 467 GALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKK 526
Query: 630 EVKKDPGCSWIELNSRVHAF-SVEDRNNPNCNVIYATLEHLTANLNSVVLF 679
++K+PGCSWIE+ RV+ F S + ++P+ I + L+ + + F
Sbjct: 527 GLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYF 577
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 113/502 (22%), Positives = 200/502 (39%), Gaps = 131/502 (26%)
Query: 23 KAITECGRNGQLV-TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
K + E G G+ +A LFD++ R V+SWN+M+ GY + L + M +
Sbjct: 51 KIMVEKGIEGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 110
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ T ++L CA+ +L GK +H L +KS +E + LL Y+ C +++ A RV
Sbjct: 111 VDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRV 170
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK----DVVVWTKLISG------- 190
F+++ E N + W+ M+ GY + A + +M K+ DVV T ++
Sbjct: 171 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSL 230
Query: 191 ----------------------------YAK--SVDGCEKALK------LFRWMRESGEN 214
YAK S++G + W GE
Sbjct: 231 DNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL 290
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P+ T ++ ACA L A GK +HG +++ G+ D + AL++ Y C
Sbjct: 291 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC-------- 342
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
G++ + R L+F+ + + +S+ MI GY ++G +++
Sbjct: 343 ------------------GVLGLAR-----LLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 379
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
F +M I E + V++ S++
Sbjct: 380 IATFNEMRDAGI-------------EPDEVSFISIL------------------------ 402
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDA 452
+ACS G L+QG +++K F E + +VD+ SR G+++ A
Sbjct: 403 -----------YACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 450
Query: 453 QASFSSIS-SPNVAAWTALMNG 473
++ +P+ W AL+ G
Sbjct: 451 YKFIETLPIAPDATIWGALLCG 472
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 195/700 (27%), Positives = 343/700 (49%), Gaps = 100/700 (14%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
++ R+G L A+++F + R V+ N ++ G K +E++ + R + +N
Sbjct: 312 VSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGT-RDSFVVNT 370
Query: 85 TTFSTILSVCAQL----NSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEAK 139
TF +LS A+ + L+ G+++H +L++G + + +GL+ YA C I++A
Sbjct: 371 DTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKAS 430
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
RVF L C +D V W +IS ++ CE
Sbjct: 431 RVFRLL-----------------C--------------ARDRVSWNTIISVLDQN-GFCE 458
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
A+ + MR+ G P+ + S + +CA L G+ VH +K G + D S+ AL
Sbjct: 459 GAMMNYCMMRQ-GCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNAL 517
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS----------------------- 296
++ Y C A + +++ + + + NS++ ++S
Sbjct: 518 VKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPN 577
Query: 297 ------------------MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLF 338
+G+ A ++ + E N++ N+++ YA G +D ++LF
Sbjct: 578 KVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVD-NALMSCYAKSGDMDSCEQLF 636
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
M R R+ V+WNSMISGY+ N ++ + M
Sbjct: 637 SSMSGR----------------RDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDC 680
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
TFS++ +AC+ + +L++G +HA +++ ES+V V ++L+DMYS+CG I+ A F+S
Sbjct: 681 CTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNS 740
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+S N +W ++++GY+ HGLG +A+ +FE M P+ TFV VLSAC AGLV+ G
Sbjct: 741 MSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRG 800
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
+ F M+ +G++P +EHY+CV+DLLGR+G L + +E+I MP++ + ++W +L AC
Sbjct: 801 LDYFEMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQ 860
Query: 579 WMN---MEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDP 635
+ +++G+ A++ + L+ + YV+ SN YA G+W R + +KK+
Sbjct: 861 SKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEA 920
Query: 636 GCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
G SW+ L VH F DR++PN IY L L + +
Sbjct: 921 GQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKN 960
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 145/594 (24%), Positives = 246/594 (41%), Gaps = 72/594 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N + + +L AR +FD M R VSW ++ GY DE+ + M
Sbjct: 94 SNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGS 153
Query: 81 KLNETT---FSTILSVC--AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ + T F ++L C A + L Q+H LV K+ Y V + L+ Y NC
Sbjct: 154 EFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNC--- 210
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
L A VF P +D++ W L+S YAK
Sbjct: 211 --------------------------SVGLPLQAQQVFDTTPVRDLITWNALMSVYAKK- 243
Query: 196 DGCEKALKLFRWMRESG---ENMPNEYTFDSVIRACARLGAFCEGKV--VHGLLIKCGFE 250
LF M E PNE+TF S+I A + L + G + V ++K G
Sbjct: 244 GYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATS-LSSCSSGVLDQVFARVLKSGSS 302
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL 310
D +G AL+ + D A ++ L+ N LI GL+ E+A IF
Sbjct: 303 SDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGT 362
Query: 311 TEAN-----------------SISYNSMIKGYAVYGQVDDSKRLFEKMP-HRSIISLNTM 352
++ SI + +++G V+G + + + K+ ++++
Sbjct: 363 RDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAK 422
Query: 353 ISVIPEMER--------NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
I + R + V+WN++IS QN E A+ Y MR+ I + S F+ +
Sbjct: 423 CGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCI--SPSNFAAI 480
Query: 405 --FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
+C+ L L GQ +H VK + + V +LV MY CG+ +++ F+S++
Sbjct: 481 SGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEH 540
Query: 463 NVAAWTALMN-GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
++ +W ++M S H +E+V +F M+ + PN TFV +LSA ++ G ++
Sbjct: 541 DIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQV 600
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ +G + ++ +SG + E+ M DAV W +++S
Sbjct: 601 HAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISG 654
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 120/523 (22%), Positives = 218/523 (41%), Gaps = 102/523 (19%)
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
+++H ++K G F+ + L+ YA + A++VFD + E N + W+ ++ GYV
Sbjct: 76 ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLS 135
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
+ +AF VF M +W +G E + P +TF S
Sbjct: 136 GITDEAFRVFKAM------LW-----------EGSEFS-------------RPTPFTFGS 165
Query: 224 VIRACARLGA--FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG--AMRVYDRL 279
V+RAC G VHGL+ K + + ++ ALI Y C A +V+D
Sbjct: 166 VLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTT 225
Query: 280 ENPCLNASNSLINGLISMGRI------------EDA-------ELIFNRLTEANSISY-- 318
L N+L++ G + +D+ E F L A S+S
Sbjct: 226 PVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCS 285
Query: 319 -----------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
++++ +A +G +D++K +F I+L
Sbjct: 286 SGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIF--------INLK----- 332
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG--- 412
ERN VT N +I G V+ + E+A+ ++M R + T TF VL A +
Sbjct: 333 ----ERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNT-DTFVVLLSAVAEFSIPE 387
Query: 413 -SLQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L +G+ +H H+++T + + + LV+MY++CG+I+ A F + + + +W +
Sbjct: 388 DGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTI 447
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
++ +G A++ + +M + I P+ + LS+C L+ G ++ +G+
Sbjct: 448 ISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGL 507
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+V + G G E+ E M E D V W +++
Sbjct: 508 DLDTSVSNALVKMYGDCGARSESWEIFNSMA-EHDIVSWNSIM 549
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/501 (21%), Positives = 202/501 (40%), Gaps = 102/501 (20%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I +N + + G + A +F + R VSWNT++ + F E + M R
Sbjct: 410 IALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQ-NGFCEGAMMNYCMMR 468
Query: 78 SNVKLNETTFSTI--LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
++ + F+ I LS CA L L G+Q+HC +K G + V + L+ Y +C
Sbjct: 469 QGC-ISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDC--- 524
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
S+++++F M + D+V W ++ S
Sbjct: 525 ----------------------------GARSESWEIFNSMAEHDIVSWNSIMGVMVSSH 556
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+++++F M SG PN+ TF +++ A + L GK VH +++K G D ++
Sbjct: 557 APTAESVEVFSNMMRSGLT-PNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAV 615
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGLISMGRIEDA----------- 303
AL+ Y D +++ + S NS+I+G I G +++
Sbjct: 616 DNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSN 675
Query: 304 --------ELIFNRLT--------------------EANSISYNSMIKGYAVYGQVDDSK 335
++ N E++ + ++++ Y+ G++D +
Sbjct: 676 QMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYAS 735
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
++F M ++N +WNSMISGY ++ L EKAL+++ M++
Sbjct: 736 KVFNSMS-----------------QKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGAC 778
Query: 396 RTRSTFSVLFHACSCLGSLQQG----QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
TF + ACS G + +G +++ H + E + ++D+ R G +
Sbjct: 779 PDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHGILPHIEHY----SCVIDLLGRAGKLLK 834
Query: 452 AQASFSSIS-SPNVAAWTALM 471
Q + + PN W ++
Sbjct: 835 IQEYINRMPMKPNTLIWRTVL 855
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 397 TRSTFSVLFHACSCL---GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+RS V HA L G + LH LVK ++++ LV++Y++ + A+
Sbjct: 52 SRSPPPVHPHAGLLLPRRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAAR 111
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML---EQDIVPNAATFVGVLSACV 510
F + N +WT L++GY G+ EA +F+ ML + P TF VL AC
Sbjct: 112 QVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQ 171
Query: 511 RAG 513
AG
Sbjct: 172 DAG 174
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/672 (27%), Positives = 326/672 (48%), Gaps = 59/672 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G +AR +FD M R VV W TM+ Y++ + D + S+ + M R ++ + T +L
Sbjct: 97 GHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLL 156
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S +L L + +H V++ G+ + + +L Y C +E+A+ +F+ + + +
Sbjct: 157 SGVLELVHL---QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVI 213
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ++ GY Q + + + I+M DG E
Sbjct: 214 SWNSLVSGYAQLGNIREVLQLLIRM-----------------KTDGIE------------ 244
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P++ TF S++ A A GK+VHG +++ G E D I +LI Y C +
Sbjct: 245 ----PDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNS 300
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIK-------- 323
A R+++ + + + + ++I+GL+ + A +F R+ ++ + + I
Sbjct: 301 AFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAE 360
Query: 324 ------GYAVYGQVDDSKRLFEKMPHRSIIS-------LNTMISVIPEM-ERNPVTWNSM 369
G +V+G + + + S+++ L SV M R+ V+WN++
Sbjct: 361 LGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAI 420
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+SG+ QN KAL L+ MRK T L AC+ +G+L QG+ +H + K+
Sbjct: 421 VSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCL 480
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+ + T+LVDMYS+CG + AQ F + ++ +W++++ GY HG G A+ ++
Sbjct: 481 GPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSD 540
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSG 548
L I PN ++ +LSAC GLV++G+ F SM K +G+ P LEH C+VDLL R+G
Sbjct: 541 FLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAG 600
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
+ EA F K M + V G LL AC N+E+G+ A+++ L YV L++
Sbjct: 601 RVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAH 660
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
YA + +W ++ ++ L +KK PG S+IEL+ + F + ++P I L+
Sbjct: 661 SYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIMLVLKI 720
Query: 669 LTANLNSVVLFD 680
L + + V + D
Sbjct: 721 LGSEMRKVGIHD 732
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 122/548 (22%), Positives = 247/548 (45%), Gaps = 61/548 (11%)
Query: 51 SWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLV 110
S+N ++ S F + L S+M ++ + TF +++ C L+ G H V
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 111 LKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAF 170
+ GY ++ + L+ FY+ + A++VFD + + N
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRN--------------------- 113
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACAR 230
VV WT +I Y ++ + + A ++ MR G P+ T ++
Sbjct: 114 ----------VVPWTTMIGCYTRAGEH-DVAFSMYNIMRRQGIQ-PSSVTMLGLLSGVLE 161
Query: 231 LGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSL 290
L + +H +I+ GF D ++ +++ YC C + A +++ ++ + + NSL
Sbjct: 162 LVHL---QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSL 218
Query: 291 INGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII--- 347
++G +G I + + R+ + + I + G V SK KM H I+
Sbjct: 219 VSGYAQLGNIREVLQLLIRM-KTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAG 277
Query: 348 -------------------SLNTMISVIPE-MERNPVTWNSMISGYVQNNLHEKALQLYM 387
++N+ + M ++ ++W +MISG VQN+ + A+ ++
Sbjct: 278 LEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFR 337
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447
M K + + +T + + AC+ LGS G +H ++++ + ++ SLV MY++CG
Sbjct: 338 RMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCG 397
Query: 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLS 507
+ + + F +S ++ +W A+++G++ +G +A+LLF M + P++ T V +L
Sbjct: 398 HLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQ 457
Query: 508 ACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
AC G +++G I + + P + T +VD+ + G L A++ MP + D V
Sbjct: 458 ACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMP-QQDLV 516
Query: 568 VWGALLSA 575
W ++++
Sbjct: 517 SWSSIIAG 524
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 154/360 (42%), Gaps = 48/360 (13%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P +++++I + GAFC+ + + ++ D +L++ + F +
Sbjct: 11 PATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSF 70
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
+ R+ +++G S +S S+I Y+ +G ++
Sbjct: 71 HQRV----------IVDGYSS-----------------DSYIATSLINFYSKFGHNQSAR 103
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
++F+ M +RN V W +MI Y + H+ A +Y MR+ I
Sbjct: 104 KVFDTMD-----------------DRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQ 146
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
+ T L S + L Q LHA +++ F S+V + S++++Y +CG + DAQA
Sbjct: 147 PSSVTMLGLL---SGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQAL 203
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F + + +V +W +L++GY+ G E + L M I P+ TF ++SA +
Sbjct: 204 FELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKL 263
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + + G+ T ++ + + G+++ A + M + D + W A++S
Sbjct: 264 GVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGM-MHKDVISWTAMISG 322
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 146/350 (41%), Gaps = 46/350 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I S N +T + G L + ++FD+M R +VSWN ++ G+++ ++L L + M +
Sbjct: 383 IPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRK 442
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ + + T ++L CA + +L GK IH V KS + + L+ Y+ C ++
Sbjct: 443 ARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGS 502
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A++ FD + + + + WS +I+GY G
Sbjct: 503 AQKCFDRMPQQDLVSWS-------------------------------SIIAGYGSHGKG 531
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIG 256
E AL+++ +G PN + S++ AC+ G +G H + G E
Sbjct: 532 -ETALRMYSDFLHTGIQ-PNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHR 589
Query: 257 GALIEFYCGCEAFDGAMRVYDRL-ENPCLNASNSLINGLISMGRIEDAELIFNR---LTE 312
+++ + A Y R+ P ++ L++ + G +E +++ L
Sbjct: 590 ACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKP 649
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRL--------FEKMPHRSIISLNTMIS 354
AN+ +Y + YA + D + +K+P S I L+ I+
Sbjct: 650 ANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTIT 699
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 106/262 (40%), Gaps = 41/262 (15%)
Query: 362 NPVT--WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
NP T +N++I+ L Y +M TF L AC+ L G
Sbjct: 10 NPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLS 69
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
H ++ + S+ Y+ TSL++ YS+ G A+ F ++ NV WT ++ Y+ G
Sbjct: 70 FHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGE 129
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLS------------ACV----------------- 510
A ++ IM Q I P++ T +G+LS ACV
Sbjct: 130 HDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLN 189
Query: 511 ---RAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP---IEL 564
+ G V + +F M + V+ + +V + G++ E + + M IE
Sbjct: 190 VYCKCGRVEDAQALFELMDARDVIS----WNSLVSGYAQLGNIREVLQLLIRMKTDGIEP 245
Query: 565 DAVVWGALLSACWFWMNMEVGE 586
D +G+L+SA + VG+
Sbjct: 246 DQQTFGSLVSAAAMQSKLGVGK 267
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
S +P ++ A++N S G + +L + ML D P+A TF ++ AC L +
Sbjct: 7 SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSH 66
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
G+ + + G T +++ + GH A + M + + V W ++
Sbjct: 67 GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMD-DRNVVPWTTMI 121
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 194/638 (30%), Positives = 326/638 (51%), Gaps = 63/638 (9%)
Query: 47 RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN----VKLNETTFSTILSVCAQLNSLID 102
R VSWN+M+ +S +ES L+ M N + T T+L VCA+ +
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 103 GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG-YV 161
GK +H +K L D EL+ + L+ Y
Sbjct: 61 GKGVHGWAVK--------------------------------LRLDKELVLNNALMDMYS 88
Query: 162 QCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM-PNEYT 220
+C +++A +F K+VV W ++ G++ D + R M GE++ +E T
Sbjct: 89 KCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD-THGTFDVLRQMLAGGEDVKADEVT 147
Query: 221 FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLE 280
+ + C K +H +K F ++E + A + Y C + A RV+ +
Sbjct: 148 ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR 207
Query: 281 NPCLNASNSLING----------LISMGRIEDAELIFNRLTEANSISYNSMIK----GYA 326
+ +N+ N+LI G L + +++ + L+ + T + +S S +K G
Sbjct: 208 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 267
Query: 327 VYGQVDDSKRLFEKMPHRSIISLN-------TMISVIPEME-RNPVTWNSMISGYVQNNL 378
V+G + + + + S++SL T+ ++ ME ++ V+WN++I+GY+QN
Sbjct: 268 VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGF 327
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTS 438
++AL ++ M I + +F ACS L SL+ G+ HA+ +K E + ++ S
Sbjct: 328 PDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS 387
Query: 439 LVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN 498
L+DMY++ GSI + F+ + + A+W A++ GY HGL EA+ LFE M P+
Sbjct: 388 LIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPD 447
Query: 499 AATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFI 557
TF+GVL+AC +GL++EG++ MK S+G+ P L+HY CV+D+LGR+G L +A +
Sbjct: 448 DLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVV 507
Query: 558 -KDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
++M E D +W +LLS+C N+E+GE+ A K+F L+ + YV+LSN+YA LGKW
Sbjct: 508 AEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKW 567
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDR 654
+R+R+ + ++KD GCSWIELN +V +F V +R
Sbjct: 568 EDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGER 605
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/525 (22%), Positives = 214/525 (40%), Gaps = 100/525 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-- 75
+V N + + G + A+ +F + VVSWNTM+ G+S + ++ M
Sbjct: 77 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 136
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+VK +E T + VC + L K++HC LK + E V + + YA C +
Sbjct: 137 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 196
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A+RVF + W+ ++ G+ Q N + D ++M ISG
Sbjct: 197 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK----------ISGL---- 242
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+P+ +T S++ AC++L + GK VHG +I+ E D +
Sbjct: 243 -------------------LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 283
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR------ 309
+++ Y C ++D +E+ L + N++I G + G + A +F +
Sbjct: 284 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 343
Query: 310 ---------------------------------LTEANSISYNSMIKGYAVYGQVDDSKR 336
L E ++ S+I YA G + S +
Sbjct: 344 QLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 403
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F + E++ +WN+MI GY + L ++A++L+ M++ +
Sbjct: 404 VFNGLK-----------------EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP 446
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDAQA 454
TF + AC+ G + +G L + +K+ F + N+ ++DM R G ++ A
Sbjct: 447 DDLTFLGVLTACNHSGLIHEG-LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 505
Query: 455 SFSSISS--PNVAAWTALMNGYSHHG---LGSE-AVLLFEIMLEQ 493
+ S +V W +L++ H +G + A LFE+ E+
Sbjct: 506 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK 550
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 273/509 (53%), Gaps = 54/509 (10%)
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
+I +P + ++ +I + K+ KA+ LFR +RE G + P+ +T+ V +A LG
Sbjct: 91 YIDIP--GLFIYNLVIKAFTKN-GSFRKAVLLFRQLREEGLS-PDNFTYPFVFKAIGCLG 146
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
EG+ V+G ++K G EFD + +L++ Y +V++ + + + N LI+
Sbjct: 147 EVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLIS 206
Query: 293 GLISMGRIEDA----ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS 348
G + R EDA IFN + I + SM+ GY GQ+D+++ LFE+ P R +
Sbjct: 207 GYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDV-- 264
Query: 349 LNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
V W +MI+GYVQ N + A+ L+ M+ + R T L
Sbjct: 265 ---------------VLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALL--- 306
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
++ VGT+L++MY++CG I + F+ + + A+WT
Sbjct: 307 ----------------------TDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWT 344
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS- 527
+++ G + +G S+A+ LF M++ + P+ TF+GVLSAC GLV EG K FRSM +
Sbjct: 345 SIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAV 404
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI---ELDAVVWGALLSACWFWMNMEV 584
Y + P LEHY C++DLLGR+G L EAEE I+ P E+ ++GALLSAC N+E+
Sbjct: 405 YQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEM 464
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
GER A+++ G++ S + +L+NIYA +W +R+++ L VKK PGCS +E+N
Sbjct: 465 GERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNG 524
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANL 673
VH F V D ++P IY+ L+ + L
Sbjct: 525 IVHEFLVGDASHPEMREIYSMLDSIAKPL 553
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/471 (20%), Positives = 205/471 (43%), Gaps = 35/471 (7%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A +F+ + I + +N ++ ++K F +++ L + + + T+ +
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
L + +G++++ V+KSG E +V + L+ YA ++ ++VF+E+ + + +
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIK----MPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
W++++ GYV+C DA DVF + MP K V+ WT ++SGY + ++A +LF
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYV-NCGQLDEARELFE- 257
Query: 208 MRESGEN------MPNEYT-FDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
R + M N Y F+ A A +V D +G ALI
Sbjct: 258 -RSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTDAVVGTALI 316
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSI 316
E Y C + ++ +++ L+ + S+I GL G+ A +F + + + I
Sbjct: 317 EMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDI 376
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
++ ++ + G V++ ++ F S+ + + P++E + +I +
Sbjct: 377 TFIGVLSACSHGGLVEEGRKHFR--------SMTAVYQIEPKLEH----YGCLIDLLGRA 424
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
++A +L + + + L AC G+++ G+ + LV + V
Sbjct: 425 GQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIE-SGDSSVH 483
Query: 437 TSLVDMYS---RCGSINDAQASFSSISSPNVAAWTAL-MNGYSHHGLGSEA 483
T L ++Y+ R + + + V +++ +NG H L +A
Sbjct: 484 TLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDA 534
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/503 (33%), Positives = 276/503 (54%), Gaps = 23/503 (4%)
Query: 172 VFIKMP--KKDVVVWTKLISGYAKSVDGC--EKALKLFRWMRESGENMPNEYTFDSVIRA 227
+F +P +V +WT +S YAK +A LF +M SG PN +T SV+++
Sbjct: 59 IFDSVPAASANVYLWTATVSSYAKHASPALAAEAFPLFMFMLRSGPR-PNGFTVSSVLKS 117
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
++L A + VHG L+K G +G L++ Y A RV+D + +
Sbjct: 118 LSKLRAAHQVCQVHGFLVKAGLASSLHVGATLLDSYGNLCRVKDARRVFDEMPRSNVVVG 177
Query: 288 NSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII 347
N++++G + G +E A +F+ + E +SIS+N+++ GY G ++ LF++MP R++
Sbjct: 178 NAMVSGYVKAGDVEAARQVFDGMVERDSISWNTLMSGYLRRGDAGLARDLFDEMPQRNVN 237
Query: 348 SLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
S WN MIS + L ++ ++ MR ++ +T +VL A
Sbjct: 238 S-----------------WNMMISACSEVGLWADSVAVFNQMRFMSFRPDAATMAVLMSA 280
Query: 408 CSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
C+ LG L + ++ L K E N +V SLVDM+++CG ++A F+ + +V ++
Sbjct: 281 CAQLGFLSVARQVYGLLRKGCVEMNCHVHNSLVDMFAKCGCFSEAHLLFAEMDPKDVVSY 340
Query: 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-K 526
+++ +HHG G +A+ LFE M+E + P+A TF+GVLSAC AGLV+ G F +M
Sbjct: 341 NVMVSALAHHGHGKDALKLFEQMIEGGLQPDAVTFLGVLSACAHAGLVDSGKYYFETMGT 400
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGE 586
+Y + + +HY C+VDL GR G + EA F+K MP++ A +WGALL+AC N++VGE
Sbjct: 401 TYAIEKSADHYACMVDLYGRVGLIEEAHYFVKIMPVKPHAGIWGALLNACRKHCNIDVGE 460
Query: 587 RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646
AA+++ ++ YV+LSN A +W D+R+ + + K+ G SW+E+ S V
Sbjct: 461 VAARELIRIEPMNPGNYVLLSNTLAWSQQWDAVGDVRQLMRGNGIDKNTGFSWVEVESVV 520
Query: 647 HAFSVEDRNNPNCNVIYATLEHL 669
H F + D ++P+ + I LE L
Sbjct: 521 HEFLMGDFSHPSFDEICGILELL 543
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 195/484 (40%), Gaps = 65/484 (13%)
Query: 5 ATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRT--VVSWNTMLCGYSKW 62
A Q + L + A+T + AR +FD +P + V W + Y+K
Sbjct: 24 ARQLHAQLLLRGLPLPARAAVTLIASSSSPQYARAIFDSVPAASANVYLWTATVSSYAKH 83
Query: 63 AK---FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
A E+ L M RS + N T S++L ++L + Q+H ++K+G
Sbjct: 84 ASPALAAEAFPLFMFMLRSGPRPNGFTVSSVLKSLSKLRAAHQVCQVHGFLVKAGLASSL 143
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
VG+ LL Y N +++A+RVFDE+ N ++ + M+ GYV+ + A VF M ++
Sbjct: 144 HVGATLLDSYGNLCRVKDARRVFDEMPRSNVVVGNAMVSGYVKAGDVEAARQVFDGMVER 203
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKV 239
D + W L+SGY + D A LF M + N +++ +I AC+ +G + +
Sbjct: 204 DSISWNTLMSGYLRRGDA-GLARDLFDEMPQRNVN-----SWNMMISACSEVGLWADSVA 257
Query: 240 VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL----NASNSLINGLI 295
V + F D + L+ A +VY L C+ + NSL++
Sbjct: 258 VFNQMRFMSFRPDAATMAVLMSACAQLGFLSVARQVYGLLRKGCVEMNCHVHNSLVDMFA 317
Query: 296 SMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
G +A L+F + + +SYN M+ A +G D+ +LFE+M
Sbjct: 318 KCGCFSEAHLLFAEMDPKDVVSYNVMVSALAHHGHGKDALKLFEQM-------------- 363
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQ 415
++ L A+ TF + AC+ G +
Sbjct: 364 ------------------IEGGLQPDAV----------------TFLGVLSACAHAGLVD 389
Query: 416 QGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG 473
G+ + T E + +VD+Y R G I +A + P+ W AL+N
Sbjct: 390 SGKYYFETMGTTYAIEKSADHYACMVDLYGRVGLIEEAHYFVKIMPVKPHAGIWGALLNA 449
Query: 474 YSHH 477
H
Sbjct: 450 CRKH 453
>gi|449450760|ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
gi|449496662|ref|XP_004160192.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
Length = 547
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/558 (31%), Positives = 291/558 (52%), Gaps = 52/558 (9%)
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
++ C + L G+ +H ++ G + + FYA C +I++A+ +FD++ N
Sbjct: 34 LIETCGRNRDLNFGRSLHARLIIDGSARLTHFAAKFIAFYAACGKIKDARILFDKIPRTN 93
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
W +++ Y +C +A VF ++ +
Sbjct: 94 PRRWIVLIGAYSRCGYYPEALSVFCELQR------------------------------- 122
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G P+EY SV++AC L G+ +H L++K E D + ALI+ Y
Sbjct: 123 --GGLRPSEYIIPSVLKACGHLSEKTTGRKLHTLILKNSLESDAYVCSALIDMYAKSGEV 180
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGY 325
+ A RV++ + L A N++++G G E+A + + + N +++N+++ G+
Sbjct: 181 EKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNTLVTGF 240
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
+ G+ + + LF++M I E + V+W S+ISG+VQN +E+A
Sbjct: 241 SQIGEEEMVRELFKEMEANGI-------------EPDVVSWTSVISGFVQNFRNEEAFDT 287
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ M T +T S L AC+ +G+ + G+ +H H + E +VYV T+LVDMY++
Sbjct: 288 FRRMLNAGFHPTSATISSLLPACASVGNGRCGKEIHGHSLALGVEKDVYVRTALVDMYAK 347
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP-NAATFVG 504
CG +A+ F +S N A W +++ GY++HG +EA+ LF M + D + TF
Sbjct: 348 CGYFYEAKILFWRMSERNSATWNSMIFGYANHGYCNEAIELFHQMKDDDEKKLDHLTFTA 407
Query: 505 VLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
+L+AC AGLV+ G +F+ M+S YG+VP +EHY C+VD+ GR+G L EA + IK MP++
Sbjct: 408 ILTACAHAGLVDLGRSLFQLMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTMPVK 467
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIR 623
D VWGALL AC +E+ E AA+ + L+ + ++LS+IYA G WG + ++
Sbjct: 468 PDLYVWGALLGACRKHGEIELAEEAAKHLSELEPGSVGNSLLLSDIYANAGSWGHVVKLK 527
Query: 624 KRLTHLEVKKDPGCSWIE 641
K + ++KK PGCSWIE
Sbjct: 528 KMMKKRKMKKFPGCSWIE 545
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 205/470 (43%), Gaps = 90/470 (19%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G++ AR LFD++P W ++ YS+ + E+LS+ + R ++ +E ++L
Sbjct: 77 GKIKDARILFDKIPRTNPRRWIVLIGAYSRCGYYPEALSVFCELQRGGLRPSEYIIPSVL 136
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C L+ G+++H L+LK+ E +V S L+ YA E+E+A+RVF+ + + +
Sbjct: 137 KACGHLSEKTTGRKLHTLILKNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAGKDLV 196
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMP---------------------------------- 177
+ M+ GY L +A ++ +M
Sbjct: 197 ALNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNTLVTGFSQIGEEEMVRELFKEM 256
Query: 178 -----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
+ DVV WT +ISG+ ++ E+A FR M +G + P T S++ ACA +G
Sbjct: 257 EANGIEPDVVSWTSVISGFVQNFRN-EEAFDTFRRMLNAGFH-PTSATISSLLPACASVG 314
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
GK +HG + G E D + AL++ Y C
Sbjct: 315 NGRCGKEIHGHSLALGVEKDVYVRTALVDMYAKC-------------------------- 348
Query: 293 GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
G +A+++F R++E NS ++NSMI GYA +G +++ LF +M
Sbjct: 349 -----GYFYEAKILFWRMSERNSATWNSMIFGYANHGYCNEAIELFHQMKDDD------- 396
Query: 353 ISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
E + + +T+ ++++ L + L+ M+ + V +AC
Sbjct: 397 -----EKKLDHLTFTAILTACAHAGLVDLGRSLFQLMQ----SKYGIVPRVEHYACMVDV 447
Query: 413 SLQQGQLLHAH-LVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ G+L A+ L+KT P + ++YV +L+ + G I A+ + +S
Sbjct: 448 FGRAGKLAEAYDLIKTMPVKPDLYVWGALLGACRKHGEIELAEEAAKHLS 497
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 141/332 (42%), Gaps = 58/332 (17%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++G++ AR +F+ M + +V+ N M+ GY+ +E+L+LV M +K N T++T
Sbjct: 176 KSGEVEKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNT 235
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF------- 142
+++ +Q+ +++ + +G E + ++ + F EEA F
Sbjct: 236 LVTGFSQIGEEEMVRELFKEMEANGIEPDVVSWTSVISGFVQNFRNEEAFDTFRRMLNAG 295
Query: 143 ------------------------DELH--------EDNELLWSLMLVGYVQCNLMSDAF 170
E+H E + + + ++ Y +C +A
Sbjct: 296 FHPTSATISSLLPACASVGNGRCGKEIHGHSLALGVEKDVYVRTALVDMYAKCGYFYEAK 355
Query: 171 DVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACAR 230
+F +M +++ W +I GYA C +A++LF M++ E + TF +++ ACA
Sbjct: 356 ILFWRMSERNSATWNSMIFGYANH-GYCNEAIELFHQMKDDDEKKLDHLTFTAILTACAH 414
Query: 231 LGAFCEGKVVHGLLIKCGFEFDESIGGAL--IEFY-CGCEAFDGAMRV---YDRLE---- 280
G G+ + F+ +S G + +E Y C + F A ++ YD ++
Sbjct: 415 AGLVDLGRSL--------FQLMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTMPV 466
Query: 281 NPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
P L +L+ G IE AE L+E
Sbjct: 467 KPDLYVWGALLGACRKHGEIELAEEAAKHLSE 498
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 276/548 (50%), Gaps = 68/548 (12%)
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
K +V W +I+ A+S D E AL+ F MR+ PN TF I++C+ L G
Sbjct: 114 KTNVFSWNSVIAELARSGDSVE-ALRAFSSMRKLSLK-PNRSTFPCAIKSCSALLDLHSG 171
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
+ H + GFE D + AL++ Y C A ++D + + + + S+I G +
Sbjct: 172 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 231
Query: 298 GRIEDAELIFNR------------------------LTEANSISYNSMIKG--------- 324
A L+F L+ + +S S+ +G
Sbjct: 232 DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG 291
Query: 325 --------------YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370
YA G++ S+R+F+ M R +IS WNS+I
Sbjct: 292 FEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVIS-----------------WNSII 334
Query: 371 SGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ Y QN + ++++++ M K I+ T S + AC+ GS + G+ +H ++K
Sbjct: 335 AVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGL 394
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
ESNV+VGTS++DMY +CG + A+ +F + NV +W+A++ GY HG EA+ +F
Sbjct: 395 ESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYE 454
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSG 548
M + PN TFV VL+AC AGL+ EG F++M + V P +EHY C+VDLLGR+G
Sbjct: 455 MNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAG 514
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
+L EA + IK M + D VVWGALL AC N+++GE +A+K+F LD K YV+LSN
Sbjct: 515 YLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSN 574
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
IYA G+W +R + + + K PG S +++ RVH F V DR +P IY LE
Sbjct: 575 IYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEK 634
Query: 669 LTANLNSV 676
L+ L V
Sbjct: 635 LSMKLQEV 642
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 203/472 (43%), Gaps = 65/472 (13%)
Query: 39 NLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQL 97
LF++ +T V SWN+++ ++ E+L S+M + ++K N +TF + C+ L
Sbjct: 106 TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 165
Query: 98 NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
L G+Q H L G+E FV S L+ Y+ C E+ +A+
Sbjct: 166 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDAR------------------ 207
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR--WMRESGENM 215
+F ++ +++V WT +I+GY ++ D +AL LF+ + ESG
Sbjct: 208 -------------TLFDEISHRNIVSWTSMITGYVQN-DDAHRALLLFKEFLVEESGSEG 253
Query: 216 PNEYTFD-----SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
E D SV+ AC+R+ + VHG LIK GFE D + L++ Y C
Sbjct: 254 DGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELG 313
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
+ RV+D + + + NS+I G ++ IF+R+ + I+YN++ +
Sbjct: 314 VSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 373
Query: 331 VDDSKRLFEKMPHRSIISLNTMISV-----IPEM------------------ERNPVTWN 367
+ K H +I + +V I +M E+N +W+
Sbjct: 374 AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWS 433
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVK 426
+M++GY + ++AL+++ M + TF + ACS G L++G A +
Sbjct: 434 AMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHE 493
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
E V +VD+ R G + +A + P+ W AL+ H
Sbjct: 494 FDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 545
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 150/324 (46%), Gaps = 44/324 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLV--------STMHRSNVKLN 83
G+L AR LFD++ R +VSW +M+ GY + +L L + V ++
Sbjct: 201 GELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVD 260
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
++LS C++++ + +H ++K G+E V + L+ YA C E+ ++RVFD
Sbjct: 261 PIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFD 320
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ E + + W+ ++ Y Q + +++ ++F +M K
Sbjct: 321 GMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVK------------------------- 355
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
GE N T +V+ ACA G+ GK +H +IK G E + +G ++I+ Y
Sbjct: 356 -------DGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMY 408
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYN 319
C C + A + +DR+ + + ++++ G G ++A +F + A N I++
Sbjct: 409 CKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFV 468
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPH 343
S++ + G +++ F+ M H
Sbjct: 469 SVLAACSHAGLLEEGWHWFKAMSH 492
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
+ NV +W +++ + G EA+ F M + + PN +TF + +C ++ G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + +G P L + +VD+ + G L +A ++ + V W ++++
Sbjct: 172 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEIS-HRNIVSWTSMITG 227
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/632 (29%), Positives = 315/632 (49%), Gaps = 53/632 (8%)
Query: 44 MPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
MP R V+WN+M+ GY + +E++ + M V+ + T S+ LS A L +L DG
Sbjct: 160 MPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDG 219
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
KQ H + + G E +GS L+ FY+ +
Sbjct: 220 KQGHAIAVICGIEMTTNLGSSLINFYS-------------------------------KV 248
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP-NEYTFD 222
L+ DA VF +M +KDVV W LISGY + + +KAL + MR EN+ + T
Sbjct: 249 GLIEDAESVFSRMLEKDVVTWNLLISGYVQ-IGEVDKALNMCHLMRL--ENLRFDSVTLA 305
Query: 223 SVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENP 282
+++ A A + GK H I+ E D + ++++ Y CE A RV++
Sbjct: 306 TLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITK 365
Query: 283 CLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLF 338
L N+++ +G +A +F ++ N IS+NS+I G+ GQV+++K +F
Sbjct: 366 DLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMF 425
Query: 339 EKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
+M + + N VTW ++ISG ++ +A+ + M++ +
Sbjct: 426 LQMQSLGV-------------QPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNV 472
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
+ + AC L SLQ G+ LH +L++ ++ + TSLVDMY++CG + A+ F
Sbjct: 473 VSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDM 532
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
I + + A+++G++ HG EA+ L+ + E+ + P+ TF L AC A +V+EG
Sbjct: 533 IPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEG 592
Query: 519 MKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
+++F M S + + P++EHY C+V LL R G L EA I MP + D + G+LL+AC
Sbjct: 593 LELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACR 652
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGC 637
+E+ E + ++ L YV +SN YA G+W + +R+ + ++K PGC
Sbjct: 653 EHNKIELEEYLSNQLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGC 712
Query: 638 SWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
SWI++ ++ F D+++P IY TL L
Sbjct: 713 SWIQVGEELNVFVAGDKSHPETEEIYTTLALL 744
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 132/540 (24%), Positives = 242/540 (44%), Gaps = 78/540 (14%)
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG--YECFEFVGSGLLFFYANC 132
M N+++ + +L C +L G+QIH ++K G + E++ + L+ FYA C
Sbjct: 1 MELKNLRIGPEVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKC 60
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
E + +F + N W+ V+ G+
Sbjct: 61 DNPEASNSLFRRVRLKNVFSWA--------------------------AVIGLNCRKGFY 94
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
++AL F+ M+E+G +P+ + +V++AC L GKVVHGL + CG+ +
Sbjct: 95 ------QEALLGFKEMQENGL-LPDNFVLPNVLKACGGLEWIRIGKVVHGL-VSCGYVW- 145
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRL 310
+ + G P NA NS+I G + G E+A +F +
Sbjct: 146 --------------KMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEM 191
Query: 311 ----TEANSISYNSMIKGYAVYGQVDDSKR----------LFEKMPHRSIISLNTMISVI 356
E ++ +S + A G + D K+ S+I+ + + +I
Sbjct: 192 REEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLI 251
Query: 357 PE--------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
+ +E++ VTWN +ISGYVQ +KAL + MR + T + L A
Sbjct: 252 EDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAF 311
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ + +L+ G+ H + ++ ES+V V +S+VDMY++C I A+ F+S + ++ W
Sbjct: 312 ADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWN 371
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
++ ++ G EA+ LF M + + PN ++ ++ + +G VNE +F M+S
Sbjct: 372 TMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQSL 431
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAE---EFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
GV P L +T ++ L RSG +EA + +++ ++ + V +L AC ++++G
Sbjct: 432 GVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQIG 491
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 157/320 (49%), Gaps = 41/320 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A ++F +M + VV+WN ++ GY + + D++L++ M N++ + T +T++
Sbjct: 249 GLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLM 308
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S A + +L GK+ HC +++ E V S ++ YA C +I A+RVF+ + +
Sbjct: 309 SAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLI 368
Query: 152 LWSLML-----------------------------------VGYVQCNLMSDAFDVFIKM 176
LW+ ML +G++ +++A D+F++M
Sbjct: 369 LWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQM 428
Query: 177 P----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
+ ++V WT LISG A+S G E A+ F+ M+E+G PN + V+ AC L
Sbjct: 429 QSLGVQPNLVTWTTLISGLARSGFGYE-AILTFQRMQEAGVK-PNVVSIIGVLLACINLA 486
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
+ G+ +HG LI+ I +L++ Y C D A RV+D + + L N++I+
Sbjct: 487 SLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMIS 546
Query: 293 GLISMGRIEDAELIFNRLTE 312
G G+ +A ++ L E
Sbjct: 547 GFALHGQAVEALALYRCLKE 566
>gi|357516987|ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522804|gb|AET03258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1002
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 194/651 (29%), Positives = 326/651 (50%), Gaps = 55/651 (8%)
Query: 29 GRNGQLVTARNLFDQMP--IRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNET 85
G+ G L A +FD+MP R V WN+M+ GY + E++ L M V+ +E
Sbjct: 255 GKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEV 314
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+ S S CA L ++ +GKQ H LV+ G+E +GS ++ FY+ IEE + VF +
Sbjct: 315 SLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSM 374
Query: 146 HE-DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
+E+ W+LM+ YVQ F +F EKAL++
Sbjct: 375 AVLKDEVTWNLMISSYVQ-------FGMF-------------------------EKALEM 402
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
WMRE + T S++ A GK +HG I+ F D ++ +++ Y
Sbjct: 403 CHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYA 462
Query: 265 GCEAFDGAMRVYDRL-ENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYN 319
C D A V+ + + N+++ G +A +F ++ N +S+N
Sbjct: 463 KCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWN 522
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
S+I G+ GQV +++ +F +M + V P N +TW +MISG QN L
Sbjct: 523 SLIFGFFRNGQVVEAQDMFSEM---------QLSGVTP----NLITWTTMISGLAQNGLG 569
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSL 439
+A +++ M+ + + + AC+ + L G+ +H ++++ ++ + TS+
Sbjct: 570 YEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSI 629
Query: 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
+DMY++CG+++DA+ F S+ + + A+++ Y+ HG +EA+ LF+ +++Q I+P+
Sbjct: 630 IDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDH 689
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
TF VLSAC L+ EG+++F+ M + P+ +HY C+V LL G L EA I
Sbjct: 690 ITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHYGCLVKLLTNDGQLDEALRIIL 749
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
MP DA + G+LL+AC E+ A+ + ++ YV LSN+YA LGKW +
Sbjct: 750 TMPSPPDAHILGSLLAACGQNHETELANYIAKWLLKVEPNNPGNYVALSNVYAALGKWDE 809
Query: 619 KMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+IR + +KK PGCSWIE+ ++ F D+++P IY L+ L
Sbjct: 810 VSNIRGFMKEKGLKKIPGCSWIEVGQELNVFIASDKSHPEKEEIYKILDLL 860
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 137/550 (24%), Positives = 240/550 (43%), Gaps = 72/550 (13%)
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG--YECFEFV 121
K E++S +S + + + + + +L C L G QIH ++K G Y EFV
Sbjct: 84 KLQEAISTLSQLPQ-HTPIGPDIYGELLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFV 142
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
S L+ YA +CNL A F + K
Sbjct: 143 ESKLVILYA-------------------------------KCNLTRVAVHFFRNVVKNQN 171
Query: 182 VVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
+ I G ++AL + M E G P+ + + ++AC L G+ +H
Sbjct: 172 LFSYAAIVGLQARNGLYKEALLSYVEMMEKG-FCPDNFVVPNGLKACGGLRWIGFGRGIH 230
Query: 242 GLLIKCGFEFDES--IGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISM 297
G ++K G EFD + +L++ Y C + A +V+D + N N NS+I G +
Sbjct: 231 GFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQN 290
Query: 298 GRIEDAELIFNRL-----TEANSISYNSMIKGYAVYGQVDDSKR--------LFE--KMP 342
G +A +F ++ E + +S + A V++ K+ FE +
Sbjct: 291 GMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVL 350
Query: 343 HRSIISLNTMISVIPEME---------RNPVTWNSMISGYVQNNLHEKALQLYMTMRK-- 391
SI++ + + +I E+E ++ VTWN MIS YVQ + EKAL++ MR+
Sbjct: 351 GSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEE 410
Query: 392 -LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
L D T S L + ++ G+ LH ++ F S++ V + ++DMY++CG ++
Sbjct: 411 NLRFDCV--TLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMD 468
Query: 451 DAQASFS-SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
A+ F + ++ W ++ + GL EA+ LF M + + PN ++ ++
Sbjct: 469 CARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGF 528
Query: 510 VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP---IELDA 566
R G V E +F M+ GV P L +T ++ L ++G +EA + M + ++
Sbjct: 529 FRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNS 588
Query: 567 VVWGALLSAC 576
+ + LSAC
Sbjct: 589 ISITSALSAC 598
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 142/338 (42%), Gaps = 68/338 (20%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTV----VSWNTMLCGYSKWAKFDESLSLVS 73
+VS N I RNGQ+V A+++F +M + V ++W TM+ G ++ E+ +
Sbjct: 518 VVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQ 577
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M + ++ N + ++ LS C + L G+ IH V+++ + + ++ YA C
Sbjct: 578 QMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCG 637
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
+++AK VFI K++ V+ +IS YA
Sbjct: 638 NLDDAKF-------------------------------VFIICSTKELPVYNAMISAYAS 666
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF-- 251
E AL LF+ + + G MP+ TF SV+ AC+ HG L+K G E
Sbjct: 667 HGKSAE-ALALFQELVKQGI-MPDHITFTSVLSACS-----------HGRLLKEGLELFK 713
Query: 252 ----------DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
E G L++ D A+R+ + +P ++ L + L + G+
Sbjct: 714 YMVCELQMKPSEKHYGCLVKLLTNDGQLDEALRIILTMPSP--PDAHILGSLLAACGQNH 771
Query: 302 DAELI------FNRLTEANSISYNSMIKGYAVYGQVDD 333
+ EL ++ N +Y ++ YA G+ D+
Sbjct: 772 ETELANYIAKWLLKVEPNNPGNYVALSNVYAALGKWDE 809
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 206/681 (30%), Positives = 323/681 (47%), Gaps = 64/681 (9%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T + N I+ G + A +FD M R +SWN+++ ++SL S
Sbjct: 192 DTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQ 251
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M ++ K + T S +L VC +L G+ +H +V+KSG E V + LL Y+ +
Sbjct: 252 MRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGK 311
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
E+A+ VF KM ++D++ W +++ + +
Sbjct: 312 SEDAEFVFH-------------------------------KMRERDLISWNSMMASHVDN 340
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+AL+L M ++ N TF + + AC L K+VH +I G +
Sbjct: 341 -GNYPRALELLIEMLQT-RKATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLI 395
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
IG AL+ Y + A RV + + N+LI G A FN L E
Sbjct: 396 IGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEG 455
Query: 315 -SISYNSMIKGYAVYGQVDDSKRLFEKMP-HRSII------------SLNTMISVIPEME 360
++Y +++ + + DD L MP H I+ SL TM + ++
Sbjct: 456 VPVNYITIVNLLSAFLSPDD--LLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLN 513
Query: 361 -----------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
+N TWN+++S E+AL+L + MR I + +FSV
Sbjct: 514 TSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIG 573
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
L L +GQ LH+ ++K FESN YV + +DMY +CG I+D S + +W
Sbjct: 574 NLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNI 633
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
L++ + HG +A F ML+ + P+ TFV +LSAC GLV+EG+ F SM +
Sbjct: 634 LISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKF 693
Query: 530 VVPT-LEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
VPT +EH C++DLLGR+G L EAE FI MP+ +VW +LL+AC N+E+ +A
Sbjct: 694 GVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKA 753
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A ++F LD SAYV+ SN+ A +W ++RK++ +KK P CSW++L ++V
Sbjct: 754 ADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTT 813
Query: 649 FSVEDRNNPNCNVIYATLEHL 669
F + D+ +P IYA LE L
Sbjct: 814 FGMGDQYHPQNAEIYAKLEEL 834
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 141/586 (24%), Positives = 255/586 (43%), Gaps = 97/586 (16%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + A+++FD+MP R SWN ++ G+ + + +++ M V+ + ++++
Sbjct: 6 GSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLV 65
Query: 92 SVCAQLNSLIDGK-QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
+ C + + +G Q+H V+K G C FVG+ LL FY + E VF E+ E N
Sbjct: 66 TACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPN- 124
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMR 209
+V WT L+ GYA +GC K + ++R +R
Sbjct: 125 ------------------------------IVSWTSLMVGYA--YNGCVKEVMSVYRRLR 152
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G NE +VIR+C L G V G +IK G + S+ +LI + C++
Sbjct: 153 RDGV-YCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSI 211
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT------------------ 311
+ A V+D ++ + NS+I + G E + F+++
Sbjct: 212 EEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVC 271
Query: 312 ---------------------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
E+N NS++ Y+ G+ +D++ +F KM R +IS
Sbjct: 272 GSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLIS-- 329
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
WNSM++ +V N + +AL+L + M + TF+ AC
Sbjct: 330 ---------------WNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYN 374
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L +L +++HA ++ N+ +G +LV MY + GS+ AQ + + W AL
Sbjct: 375 LETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNAL 431
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA-GLVNEGMKIFRSMKSYG 529
+ G++ + + A+ F ++ E+ + N T V +LSA + L++ GM I + G
Sbjct: 432 IGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAG 491
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ ++ + + G L+ + +I D+ ++ W A+LSA
Sbjct: 492 FELETFVQSSLITMYAQCGDLNTS-NYIFDVLANKNSSTWNAILSA 536
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 132/609 (21%), Positives = 247/609 (40%), Gaps = 90/609 (14%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G G + +F ++ +VSW +++ GY+ E +S+ + R V NE +
Sbjct: 105 GTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMA 164
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
T++ C L + G Q+ V+KSG + V + L+ + NC IEEA VFD++ E
Sbjct: 165 TVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKE- 223
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+D + W +I+ + CEK+L+ F M
Sbjct: 224 ------------------------------RDTISWNSIITASVHN-GHCEKSLEYFSQM 252
Query: 209 RESGENMPNEY-TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
R + + +Y T +++ C G+ +HG+++K G E + + +L+ Y
Sbjct: 253 RYT--HAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAG 310
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEANSISY-------- 318
+ A V+ ++ L + NS++ + G A EL+ L + +Y
Sbjct: 311 KSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALS 370
Query: 319 ---------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
N+++ Y +G + ++R+ + MP
Sbjct: 371 ACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMP--------- 421
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA-CSC 410
+R+ VTWN++I G+ N A++ + +R+ + T L A S
Sbjct: 422 --------DRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSP 473
Query: 411 LGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTAL 470
L G +HAH+V FE +V +SL+ MY++CG +N + F +++ N + W A+
Sbjct: 474 DDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAI 533
Query: 471 MNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
++ +H+G G EA+ L M I + +F + L++EG ++ + +G
Sbjct: 534 LSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGF 593
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
+D+ G+ G + + + P W L+SA + A
Sbjct: 594 ESNDYVLNATMDMYGKCGEIDDVFRILPQ-PRSRSQRSWNILISALARHGFFQQAREAFH 652
Query: 591 KMFGLDKKP 599
+M L +P
Sbjct: 653 EMLDLGLRP 661
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 197/474 (41%), Gaps = 99/474 (20%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y + + A VF KMP+++ W L+SG+ + V +KA++ F M E G P+ Y
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVR-VGWYQKAMQFFCHMLEHGVR-PSSY 59
Query: 220 TFDSVIRACARLGAFCEGKV-VHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDR 278
S++ AC R G EG VH +IKCG D +G +L+ FY
Sbjct: 60 VAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYG-------------- 105
Query: 279 LENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLF 338
+ G + + +++F + E N +S+ S++ GYA G V + ++
Sbjct: 106 -----------------TFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVY 148
Query: 339 EKMPHRSII--------------------------------SLNTMISVIPEM------- 359
++ + L+T +SV +
Sbjct: 149 RRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNC 208
Query: 360 --------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
ER+ ++WNS+I+ V N EK+L+ + MR T S L
Sbjct: 209 DSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALL 268
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
C +L+ G+ LH +VK+ ESNV V SL+ MYS+ G DA+ F + ++
Sbjct: 269 PVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLI 328
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
+W ++M + +G A+ L ML+ N TF LSAC ++ + +
Sbjct: 329 SWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYN-------LETLKIV 381
Query: 526 KSYGVVPTLEHY----TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++ ++ L H +V + G+ G + A+ K MP + D V W AL+
Sbjct: 382 HAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMP-DRDEVTWNALIGG 434
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 144/304 (47%), Gaps = 30/304 (9%)
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
Y+ +G ++ ++ +F+KMP ERN +WN+++SG+V+ ++KA+Q
Sbjct: 2 YSKFGSIEHAQHVFDKMP-----------------ERNEASWNNLMSGFVRVGWYQKAMQ 44
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL-LHAHLVKTPFESNVYVGTSLVDMY 443
+ M + + + + L AC G + +G +HAH++K +V+VGTSL+ Y
Sbjct: 45 FFCHMLEHGVRPSSYVAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFY 104
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
G + + F I PN+ +WT+LM GY+++G E + ++ + + N
Sbjct: 105 GTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMA 164
Query: 504 GVLSACVRAGLVNE--GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
V+ +C LV++ G ++ S+ G+ T+ ++ + G + EA DM
Sbjct: 165 TVIRSC--GVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMK 222
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLG-----KW 616
E D + W ++++A + E +M K + Y+ +S + V G +W
Sbjct: 223 -ERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAK--TDYITISALLPVCGSAQNLRW 279
Query: 617 GKKM 620
G+ +
Sbjct: 280 GRGL 283
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
MYS+ GSI AQ F + N A+W LM+G+ G +A+ F MLE + P++
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 502 FVGVLSACVRAGLVNEG-MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
+++AC R+G + EG ++ + G+ + T ++ G G + E + K++
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 561 PIELDAVVWGALL 573
E + V W +L+
Sbjct: 121 E-EPNIVSWTSLM 132
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 249/445 (55%), Gaps = 20/445 (4%)
Query: 216 PNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P+ ++S+IRA R + E ++ + ++ K G E D IG L++ Y A
Sbjct: 112 PSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRARE 171
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
V+D++ + A N++I GL A +F+++ + + +S+ +M+ GYA G +
Sbjct: 172 VFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEV 231
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
LF+KM + VTWN +I+ Y+QN ++A+ + MR
Sbjct: 232 LELFDKM------------------KLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENF 273
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
TF + A + L + ++G HA +++ F SN VG SL+DMY++CG ++ ++
Sbjct: 274 HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEK 333
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F+ + + +W A+++GY+ HG G A+ LF +M E + ++ +FV VLSAC AGL
Sbjct: 334 LFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGL 393
Query: 515 VNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V EG KIF SM Y + P LEHY C+VDLLGR+G E FIK MP+E DA VWGALL
Sbjct: 394 VEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 453
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
+C N+++GE A + L+ + + +V+LS+IYA G+W R ++ L +KK
Sbjct: 454 GSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKK 513
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPN 658
PGCSW+EL ++VHAF V D+++P
Sbjct: 514 TPGCSWVELKNKVHAFRVGDKSHPQ 538
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 207/458 (45%), Gaps = 86/458 (18%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
AR++FD P + + WN+M+ Y++ +++E+L +
Sbjct: 102 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMY------------------------ 137
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
+C+V K G E F+G+GL+ Y+ +++ A+ VFD++ + + + W+ M
Sbjct: 138 ----------YCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 187
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC-EKALKLFRWMR------ 209
+ G Q A VF +M +D V W +++GYA +GC + L+LF M+
Sbjct: 188 IAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAH--NGCFVEVLELFDKMKLGNVTW 245
Query: 210 --------ESG--------------ENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIK 246
++G EN PN TF SV+ A A L AF EG H +I+
Sbjct: 246 NVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQ 305
Query: 247 CGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELI 306
GF + +G +LI+ Y C D + ++++ +++ + N++++G G + A +
Sbjct: 306 MGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIAL 365
Query: 307 FNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
F+ + E+ +S+S+ S++ G V++ +++F M + I P++E
Sbjct: 366 FSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIK--------PDLEH- 416
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
+ M+ + L ++ L ++ + ++ + L +C +++ G++
Sbjct: 417 ---YACMVDLLGRAGLFDETLGF---IKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALD 470
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
HLVK + + L +Y++ G DA + S ++
Sbjct: 471 HLVKLEPRNPAHF-VVLSSIYAQSGRWADAGKARSKMN 507
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 166/417 (39%), Gaps = 88/417 (21%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
NG V LFD+M + V +WN ++ Y + E++S M N N TF
Sbjct: 223 AHNGCFVEVLELFDKMKLGNV-TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFV 281
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++L A L + +G H +++ G+ VG+ L+ YA C +++ ++++F+E+
Sbjct: 282 SVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHK 341
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ ML GY + G+ ++A+ LF M
Sbjct: 342 DTVSWNAMLSGYA--------------------------VHGHG------DRAIALFSLM 369
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
+ES + + +F SV+ AC G EG K+ H + K + D +++
Sbjct: 370 QESQVQI-DSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAG 428
Query: 268 AFDGAM------------RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
FD + V+ L C SN + +G + L+ +L N
Sbjct: 429 LFDETLGFIKVMPVEPDAGVWGALLGSCRMHSN------VKLGEVALDHLV--KLEPRNP 480
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKM--------PHRSIISLNTMISVI-------PEME 360
+ + YA G+ D+ + KM P S + L + P++E
Sbjct: 481 AHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLE 540
Query: 361 RNPVTWNSMIS-----GYVQN------NLHE--KALQLYMTMRKLAIDRTRSTFSVL 404
+ WN+++ GYV + N+ E K + LY +LAI TF++L
Sbjct: 541 SMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAI-----TFALL 592
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ L +C L L Q +HA ++ + F+ + + T L+++YS + A++ F S
Sbjct: 55 YPRLLSSCKHLNPLLQ---IHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTP 110
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIM-----LEQDIVPNAATFVGVLSACVRAGLV 515
+P+ W +++ Y+ +EA+ ++ M LE+D+ A G++ + G +
Sbjct: 111 NPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGA----GLVDMYSKMGDL 166
Query: 516 NEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++F M VV + ++ L +S + A M ++ D V WG +++
Sbjct: 167 KRAREVFDKMPKRDVVA----WNAMIAGLSQSEDPYVARRVFDQM-VDQDDVSWGTMMAG 221
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 196/643 (30%), Positives = 319/643 (49%), Gaps = 64/643 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL--NETTFST 89
G + AR LF++MP +++S+N ++ Y + + +++S+ M VK + T+
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+ +L S+ G +H +L+S + ++V + LL Y N ++E A+ VFD
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFD------ 176
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
M +DV+ W +ISGY ++ AL +F WM
Sbjct: 177 -------------------------VMKNRDVISWNTMISGYYRN-GYMNDALMMFDWMV 210
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
++ + T S++ C L G+ VH L+ + + AL+ Y C
Sbjct: 211 NESVDL-DHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-----ANSISYNSMIKG 324
D A V+DR+E + +ING G +E+A L RL + N+++ S++
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENA-LELCRLMQFEGVRPNAVTIASLVSV 328
Query: 325 YAVYGQVDDSKRL----FEKMPHRSIISLNTMISVIPEMER--------------NPVTW 366
+V+D K L + + II ++IS+ + +R + W
Sbjct: 329 CGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPW 388
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+++I+G VQN L AL L+ MR+ ++ +T + L A + L L+Q +H +L K
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK 448
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS----SPNVAAWTALMNGYSHHGLGSE 482
T F S++ T LV +YS+CG++ A F+ I S +V W AL++GY HG G
Sbjct: 449 TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN 508
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVV 541
A+ +F M+ + PN TF L+AC +GLV EG+ +FR M + Y + HYTC+V
Sbjct: 509 ALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIV 568
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
DLLGR+G L EA I +P E + VWGALL+AC N+++GE AA K+F L+ +
Sbjct: 569 DLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTG 628
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
YV+L+NIYA LG+W +R + ++ ++K PG S IE+ S
Sbjct: 629 NYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 241/527 (45%), Gaps = 58/527 (11%)
Query: 75 MHRSNVKLNETT-FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
+ R+N L+ + ++L+ A S+ K +HC V+ G + S L YA C
Sbjct: 5 LRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHIL-STLSVTYALCG 63
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
I A+++F+E+ + + L +++++ YV+ L DA VFI+M + V
Sbjct: 64 HITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGV------------ 111
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+ +P+ YT+ V +A L + G VVHG +++ F D+
Sbjct: 112 -------------------KCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDK 152
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN-RLTE 312
+ AL+ Y + A V+D ++N + + N++I+G G + DA ++F+ + E
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNE 212
Query: 313 ANSISYNSMIKGYAVYGQVDD------------SKRLFEKMPHRSII--------SLNTM 352
+ + + +++ V G + D KRL +K+ ++ + ++
Sbjct: 213 SVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA 272
Query: 353 ISVIPEMERNPV-TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
V MER V TW MI+GY ++ E AL+L M+ + T + L C
Sbjct: 273 RFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDA 332
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
+ G+ LH V+ S++ + TSL+ MY++C ++ FS S + W+A++
Sbjct: 333 LKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAII 392
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
G + L S+A+ LF+ M +D+ PN AT +L A + + M I + G +
Sbjct: 393 AGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFM 452
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEF---IKDMPIELDAVVWGALLSA 575
+L+ T +V + + G L A + I++ D V+WGAL+S
Sbjct: 453 SSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISG 499
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 174/453 (38%), Gaps = 125/453 (27%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
+CGR + AR +FD+M R V++W M+ GY++ + +L L M V+ N T
Sbjct: 265 KCGRMDE---ARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
++++SVC + DGK +H ++ + + L+ YA C ++ RVF
Sbjct: 322 IASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS 381
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ + WS ++ G VQ L+SDA +F +M ++DV
Sbjct: 382 KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV------------------------- 416
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
PN T +S++ A A L + +H L K GF L+ Y C
Sbjct: 417 --------EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKC 468
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS----ISYNSMI 322
G +E A IFN + E + + + ++I
Sbjct: 469 -------------------------------GTLESAHKIFNGIQEKHKSKDVVLWGALI 497
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
GY ++G ++ ++F EM R+ VT N +
Sbjct: 498 SGYGMHGDGHNALQVF------------------MEMVRSGVTPNEI------------- 526
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV---KTPFESNVYVGTSL 439
TF+ +ACS G +++G L ++ KT SN Y T +
Sbjct: 527 -----------------TFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHY--TCI 567
Query: 440 VDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
VD+ R G +++A ++I P W AL+
Sbjct: 568 VDLLGRAGRLDEAYNLITTIPFEPTSTVWGALL 600
>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 296/612 (48%), Gaps = 57/612 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI- 90
G L A +FD++ R VV+W ++ G + + L + MHR F T+
Sbjct: 183 GVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLE 242
Query: 91 --LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
C L +L++G+ +H LV+K+G + + V S LL Y+ C EE
Sbjct: 243 GGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEE----------- 291
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
A F ++ KD++ WT +IS Y++ + + + +F M
Sbjct: 292 --------------------AHRSFCEVLNKDIISWTSMISAYSR-MGWATECIDMFWEM 330
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
SG P+ ++ + + E K HGL+I+ + D+ + AL+ YC
Sbjct: 331 LVSGI-YPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGF 389
Query: 269 FDGAMRVYDRLENPCLNASNSLINGL--ISMGRIEDAELIFNRLTEANSISYNSMIKGYA 326
A + + R+ A N +++G + R +I N + E S++ NS+I Y
Sbjct: 390 LKLAEKFFGRVNEQNFEAWNLMVSGYGATHLARSIHCYMIKNLMDENVSVN-NSLIDMYG 448
Query: 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLY 386
G + ++R+F ++P R+ VTWN++IS Y +AL LY
Sbjct: 449 KSGNLTIARRIFCRIP------------------RDIVTWNTLISSYAHCGHFAEALSLY 490
Query: 387 MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC 446
M + +T + ACS L SL++G+ +H ++ FE N+ + T+L+DMY++C
Sbjct: 491 DKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKC 550
Query: 447 GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVL 506
G + ++ F+S+ +V W +++GY HG A+ F+ M E PN TF+ VL
Sbjct: 551 GQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVL 610
Query: 507 SACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDA 566
SAC AGLV EG +F M+ Y V P L+HY C+VDLLGRSG+L EAE + MPI D
Sbjct: 611 SACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDG 670
Query: 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRL 626
VWGALLS+C +E+G R A+ D + YV++SN+Y+ +GKW + R +
Sbjct: 671 GVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMISNMYSSIGKWEEAEKARGIM 730
Query: 627 THLEVKKDPGCS 638
V+K G S
Sbjct: 731 KERGVRKKTGWS 742
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 125/569 (21%), Positives = 224/569 (39%), Gaps = 124/569 (21%)
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
Q++SL Q H ++ SGY F+ S L+ YA+ + + +FDE+
Sbjct: 44 QISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEI---------- 93
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
P +D +W +I + + + +AL ++WMR S E +
Sbjct: 94 ---------------------PHRDAFLWNSIIKAHFSNGE-YSRALDFYQWMRAS-EAL 130
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG-FEFDESIGGALIEFYCGCEAFDGAMR 274
PN +T ++ +CA L G+ +HGL+ K G F ++G + + Y C + A
Sbjct: 131 PNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYG 190
Query: 275 VYDRLENPCLNASNSLINGLISMGRIE--------------DAELIFNRLTEA------- 313
V+D + + A +L+ G + G + D E R E
Sbjct: 191 VFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGN 250
Query: 314 ----------------NSISYNSMIKG-----YAVYGQVDDSKRLFEKMPHRSIISLNTM 352
+ Y+ +++ Y+ G +++ R F ++ ++ IIS +M
Sbjct: 251 LGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSM 310
Query: 353 ISVIPEM----ERNPVTWNSMISGYVQNNL----------------HEKALQLYMTMRKL 392
IS M E + W ++SG + + KA + R
Sbjct: 311 ISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHY 370
Query: 393 AIDR--------------------------TRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+D+ F S G+ + +H +++K
Sbjct: 371 TLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGATHLARSIHCYMIK 430
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ NV V SL+DMY + G++ A+ F I ++ W L++ Y+H G +EA+ L
Sbjct: 431 NLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIPR-DIVTWNTLISSYAHCGHFAEALSL 489
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
++ M+ +D+ PN+AT V VLSAC + EG K+ + L T ++D+ +
Sbjct: 490 YDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAK 549
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G L ++ E M E D + W ++S
Sbjct: 550 CGQLEKSREIFNSMH-ERDVITWNVMISG 577
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA ++ + + +N+++ + L+ +Y+ + + F I + W +++ + +G
Sbjct: 55 HAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEY 114
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHY--- 537
S A+ ++ M + +PN T ++++C LVN G I +G+V L +
Sbjct: 115 SRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSI------HGLVSKLGLFSGS 168
Query: 538 ----TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+ V + + G L EA ++ D V W AL+ C
Sbjct: 169 SAVGSSFVYMYSKCGVLEEAYGVFDEILFR-DVVAWTALVIGC 210
>gi|218186152|gb|EEC68579.1| hypothetical protein OsI_36919 [Oryza sativa Indica Group]
Length = 586
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 260/497 (52%), Gaps = 53/497 (10%)
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
++ Y + L+ DA +F + P++D+ +++ L++ + S E AL + R M +
Sbjct: 20 LVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAISHSA-SPELALPILRCMLSADALH 78
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P+ + SV ARL + G+ +H + + D+ + +L++ YC C
Sbjct: 79 PDHFVISSVASVFARLRSRRLGRQLHAHFVASPYNGDDVVKSSLVDMYCKC--------- 129
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
G +D +F+ ++ NS+ + +++ GYA G+ +++
Sbjct: 130 ----------------------GSPDDGRKVFDSMSAKNSVVWTALVSGYASNGRSEEAL 167
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
+LF MP R++ + W ++ISG V A++L++ MR+ +
Sbjct: 168 QLFRSMPGRNLFA-----------------WTALISGLVNTGESVGAVELFVEMRRDGV- 209
Query: 396 RTRSTF--SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
R F S++ A + L + G+ LH ++ F SN+ VG +L+DMYS+C I A+
Sbjct: 210 RIDDAFVLSIVIGASADLAAFVLGRQLHGSAMRLGFLSNMIVGNALIDMYSKCSDILSAR 269
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F I+ +V +WT ++ G + HG EA+ L++ M+ PN TFVG++ AC AG
Sbjct: 270 EVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAG 329
Query: 514 LVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
LV +G ++F SMK+ YG+ P L+HYTC +DLL RSGHL EAEE + MP E D WGAL
Sbjct: 330 LVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGAL 389
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
LSAC + + E+ R + K+ L K S Y++LSN+YAV GKW +RK + LE++
Sbjct: 390 LSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEIR 449
Query: 633 KDPGCSWIELNSRVHAF 649
K+PG SWIE F
Sbjct: 450 KEPGYSWIEAGREFRLF 466
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 162/322 (50%), Gaps = 6/322 (1%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-VKLN 83
++ ++ L A +LFD+ P R + ++++L S A + +L ++ M ++ + +
Sbjct: 21 VSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAISHSASPELALPILRCMLSADALHPD 80
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
S++ SV A+L S G+Q+H + S Y + V S L+ Y C ++ ++VFD
Sbjct: 81 HFVISSVASVFARLRSRRLGRQLHAHFVASPYNGDDVVKSSLVDMYCKCGSPDDGRKVFD 140
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ N ++W+ ++ GY +A +F MP +++ WT LISG + + A++
Sbjct: 141 SMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESV-GAVE 199
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
LF MR G + + + VI A A L AF G+ +HG ++ GF + +G ALI+ Y
Sbjct: 200 LFVEMRRDGVRIDDAFVLSIVIGASADLAAFVLGRQLHGSAMRLGFLSNMIVGNALIDMY 259
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYN 319
C A V++ + + + +++ G GR E+A +++R+ A N +++
Sbjct: 260 SKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFV 319
Query: 320 SMIKGYAVYGQVDDSKRLFEKM 341
+I + G V ++LFE M
Sbjct: 320 GLIYACSHAGLVQKGRQLFESM 341
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLH 379
+++ YA + D+ LF++ P R I ++S+++ +
Sbjct: 19 ALVSAYAKSRLLPDALHLFDETPRRDIY-----------------IYSSLLTAISHSASP 61
Query: 380 EKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ---GQLLHAHLVKTPFESNVYVG 436
E AL + M L+ D V+ S L+ G+ LHAH V +P+ + V
Sbjct: 62 ELALPILRCM--LSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVASPYNGDDVVK 119
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+SLVDMY +CGS +D + F S+S+ N WTAL++GY+ +G EA+ LF M +++
Sbjct: 120 SSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLF 179
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
+ ++S V G +++F M+ GV
Sbjct: 180 ----AWTALISGLVNTGESVGAVELFVEMRRDGV 209
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 17/258 (6%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET-TFST 89
NG+ A LF MP R + +W ++ G + ++ L M R V++++ S
Sbjct: 160 NGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSI 219
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
++ A L + + G+Q+H ++ G+ VG+ L+ Y+ C +I A+ VF+ + +
Sbjct: 220 VIGASADLAAFVLGRQLHGSAMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRD 279
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGYAKSVDG-CEKALKL 204
+ W+ M+VG Q +A ++ +M K + V + LI YA S G +K +L
Sbjct: 280 VISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLI--YACSHAGLVQKGRQL 337
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F M+ P + + +R G E + L+ +E DE+ GAL+
Sbjct: 338 FESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAE---ELMTTMPYEPDEATWGALL---S 391
Query: 265 GCEAFDGA---MRVYDRL 279
C + A +R+ D+L
Sbjct: 392 ACTKYKDAEMCIRISDKL 409
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 48/89 (53%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
++ N I + +++AR +F+ + R V+SW TM+ G ++ + +E+L+L M
Sbjct: 249 MIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVL 308
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQI 106
+ K NE TF ++ C+ + G+Q+
Sbjct: 309 AGAKPNEVTFVGLIYACSHAGLVQKGRQL 337
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 262/484 (54%), Gaps = 24/484 (4%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P + ++ C L +G+ +H + FE D + ++ Y C + + A +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQV 331
+D++ + + LI+G G+ +A +F ++ + N + +S++K G
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGT-GPS 221
Query: 332 DDSKRLFEKMPHRSIISLNTMI-SVIPEM------------------ERNPVTWNSMISG 372
D R + +N + S + +M +N V+WN++I+G
Sbjct: 222 DHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAG 281
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
+ + E ++L++ M + + T T+S +F AC+ GSL+QG+ +HAH++K+ +
Sbjct: 282 HARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPI 341
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
Y+G +L+DMY++ GSI DA+ F + ++ +W ++++GY+ HGLG+EA+ LFE ML+
Sbjct: 342 AYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLK 401
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ PN TF+ VL+AC +GL++EG F MK + + + H+ VVDLLGR+G L+E
Sbjct: 402 AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNE 461
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A +FI++MPI+ A VWGALL +C NM++G AA+++F LD +V+LSNIYA
Sbjct: 462 ANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYAS 521
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTAN 672
G+ +RK + VKK+P CSW+E+ + VH F D ++P I E ++
Sbjct: 522 AGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGK 581
Query: 673 LNSV 676
+ +
Sbjct: 582 IKEI 585
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 158/338 (46%), Gaps = 37/338 (10%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLV 72
T E +V N + + G L A++LFD+MP + +VSW ++ GYS+ + E+L+L
Sbjct: 135 TFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALF 194
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
M + NE T S++L S G+Q+H LK GY+ VGS LL YA
Sbjct: 195 PKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARW 254
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
+ EAK +F+ L N + W+ LI+G+A
Sbjct: 255 AHMREAKVIFNSLAAKNVVSWN-------------------------------ALIAGHA 283
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD 252
+ +G E ++LF M G P +T+ SV ACA G+ +GK VH +IK G +
Sbjct: 284 RKGEG-EHVMRLFLQMLRQGFE-PTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPI 341
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
IG LI+ Y + A +V+ RL + + NS+I+G G +A +F ++ +
Sbjct: 342 AYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLK 401
Query: 313 A----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
A N I++ S++ + G +D+ + FE M I
Sbjct: 402 AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKI 439
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 116/487 (23%), Positives = 201/487 (41%), Gaps = 91/487 (18%)
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
T +S +L+ C L L G+ IH + S +E + + +L YA C +EEA+ +FD
Sbjct: 105 RTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFD 164
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
++ + + W++++ GY Q S+A +F KM L G+
Sbjct: 165 KMPTKDMVSWTVLISGYSQSGQASEALALFPKM----------LHLGF------------ 202
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
PNE+T S+++A + G+ +H +K G++ + +G +L++ Y
Sbjct: 203 -----------QPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMY 251
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL------------- 310
A +++ L + + N+LI G G E +F ++
Sbjct: 252 ARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYS 311
Query: 311 ------------------------TEANSISY--NSMIKGYAVYGQVDDSKRLFEKMPHR 344
+ I+Y N++I YA G + D+K++F ++ +
Sbjct: 312 SVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQ 371
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
I+S WNS+ISGY Q+ L +ALQL+ M K + TF +
Sbjct: 372 DIVS-----------------WNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSV 414
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPN 463
ACS G L +GQ + K E+ V ++VD+ R G +N+A + P
Sbjct: 415 LTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPT 474
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
A W AL+ H V E + E D ++ V + + AG +++ K+ +
Sbjct: 475 AAVWGALLGSCRMHKNMDLGVYAAEQIFELD-PHDSGPHVLLSNIYASAGRLSDAAKVRK 533
Query: 524 SMKSYGV 530
MK GV
Sbjct: 534 MMKESGV 540
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 149/310 (48%), Gaps = 25/310 (8%)
Query: 266 CEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGY 325
C + + +Y ++ N C + GR A I + E + + N ++ Y
Sbjct: 98 CGSLEPERTLYSKMLNKCTYLRK------LKQGRAIHAH-IQSSTFEDDLVLLNFILNMY 150
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQL 385
A G +++++ LF+KMP + ++S W +ISGY Q+ +AL L
Sbjct: 151 AKCGSLEEAQDLFDKMPTKDMVS-----------------WTVLISGYSQSGQASEALAL 193
Query: 386 YMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSR 445
+ M L T S L A S G+ LHA +K ++ NV+VG+SL+DMY+R
Sbjct: 194 FPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYAR 253
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
+ +A+ F+S+++ NV +W AL+ G++ G G + LF ML Q P T+ V
Sbjct: 254 WAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSV 313
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
+AC +G + +G + + G P ++D+ +SG + +A++ + + ++ D
Sbjct: 314 FTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQD 372
Query: 566 AVVWGALLSA 575
V W +++S
Sbjct: 373 IVSWNSIISG 382
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 268/547 (48%), Gaps = 69/547 (12%)
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+ DV W LI+ A+ D CE +L+ F WMR+ + PN TF I++C+ L G
Sbjct: 44 RTDVYSWNSLIAELARGGDSCE-SLRAFSWMRKL-DIKPNRSTFPCAIKSCSALFDLNSG 101
Query: 238 KVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISM 297
K H + GFE D + ALI+ Y C A ++D + + SLI G +
Sbjct: 102 KQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQN 161
Query: 298 GRIEDAELIFNRL-------------TEANSISY-------------------------- 318
+A ++F T +S++
Sbjct: 162 DDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKV 221
Query: 319 ---------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSM 369
N+++ YA G+V S+++F+ M E++ V+WNSM
Sbjct: 222 GLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMA-----------------EKDVVSWNSM 264
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDR-TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
I+ Y QN L A +++ M K + T S L AC+ G+L+ G LH ++K
Sbjct: 265 IAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMG 324
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
+ +NV + TS++DMY +CG A+ +F + NV +WTA++ GY HG EA+ +F
Sbjct: 325 YVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFY 384
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRS 547
M+ + PN TF+ VL+AC AG + EG + F +M Y V P +EHY C+VDLLGR+
Sbjct: 385 QMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRA 444
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G++ EA IK M + D V+WG+LL+AC ++E+ E +A+++F LD YV+L+
Sbjct: 445 GYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLA 504
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NIYA G+W +R + + K PG S +EL RVH F V D+ +P IY LE
Sbjct: 505 NIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLE 564
Query: 668 HLTANLN 674
L+ L
Sbjct: 565 ELSVKLQ 571
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 199/484 (41%), Gaps = 66/484 (13%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRT-VVSWNTMLCGY 59
MK+ T S L+T I + + T N L T LF++ RT V SWN+++
Sbjct: 1 MKIPYTISLQLLTISFKIHKNHFSTTAAATNTNLTT---LFNKYFDRTDVYSWNSLIAEL 57
Query: 60 SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
++ ESL S M + ++K N +TF + C+ L L GKQ H L G+E
Sbjct: 58 ARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDL 117
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
FV S L+ Y+ +C +S+A +F ++P++
Sbjct: 118 FVSSALIDMYS-------------------------------KCGKLSNARVLFDEIPRR 146
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNE-------YTFDSVIRACARLG 232
++V WT LI+GY ++ D E + ++ E E E SV+ AC+R+
Sbjct: 147 NIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVS 206
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
+ VHG+ IK G + + L++ Y C + +V+D + + + NS+I
Sbjct: 207 NKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIA 266
Query: 293 GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTM 352
G DA +F+ + +A YN + + + H +I + +
Sbjct: 267 VYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYV 326
Query: 353 ISVI--------------PEMERNPV---------TWNSMISGYVQNNLHEKALQLYMTM 389
+VI EM RN +W +MI+GY + +AL ++ M
Sbjct: 327 NNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQM 386
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
+ TF + ACS G L++G + +A + E V +VD+ R G
Sbjct: 387 IWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGY 446
Query: 449 INDA 452
I +A
Sbjct: 447 IKEA 450
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 200/468 (42%), Gaps = 73/468 (15%)
Query: 5 ATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK 64
A Q + E+ + ++ I + G+L AR LFD++P R +V+W +++ GY +
Sbjct: 104 AHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDD 163
Query: 65 FDESLSLVSTM---------HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGY 115
E+L + ++ ++LS C+++++ + +H + +K G
Sbjct: 164 AHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGL 223
Query: 116 ECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIK 175
+ V + LL YA C E+ +++VFD+
Sbjct: 224 DKVMGVENTLLDAYAKCGEVSLSRKVFDD------------------------------- 252
Query: 176 MPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFC 235
M +KDVV W +I+ YA++ + A ++F M ++G NE T +++ ACA GA
Sbjct: 253 MAEKDVVSWNSMIAVYAQNGLSTD-AFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALR 311
Query: 236 EGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI 295
G +H +IK G+ + + ++I+ YC C + A +D ++ + + ++I G
Sbjct: 312 VGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYG 371
Query: 296 SMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
G +A +F ++ + N I++ S++ + G +++ R F M H
Sbjct: 372 MHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHE------- 424
Query: 352 MISVIPEMERNPVTWNSMI-----SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
+V P +E + M+ +GY++ + Y ++ + + R + L
Sbjct: 425 -YNVEPGVEH----YGCMVDLLGRAGYIK--------EAYNLIKSMKVRRDFVLWGSLLA 471
Query: 407 ACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRCGSINDAQ 453
AC ++ ++ L K P YV L ++Y+ G D +
Sbjct: 472 ACRIHKDVELAEISARELFKLDPSNCGYYV--LLANIYADAGRWKDVE 517
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 196/643 (30%), Positives = 315/643 (48%), Gaps = 64/643 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKL--NETTFST 89
G + AR LFD+MP +++S+N ++ Y + + +++++ M +K + T+
Sbjct: 63 GHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPF 122
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+ +L S+ G IH +L+S + ++V + LL Y N +E A+ VFD
Sbjct: 123 VAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFD------ 176
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
M +DV+ W +ISGY ++ AL +F WM
Sbjct: 177 -------------------------VMKNRDVISWNTMISGYYRN-GYMNDALMMFDWMV 210
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G + P+ T S++ C L G+ VH L+ + + AL+ Y C
Sbjct: 211 NEGVD-PDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE-----ANSISYNSMIK- 323
D A V+ R+E + +ING I G +E+A L RL + N+++ S++
Sbjct: 270 DEARFVFGRMERRDVITWTCMINGYIEDGDVENA-LELCRLMQFEGVRPNAVTIASLVSA 328
Query: 324 ---------GYAVYGQVDDSKRLFEKMPHRSIISL-------NTMISVIPEMERNPV-TW 366
G ++G K + + S+IS+ + V RN W
Sbjct: 329 CGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPW 388
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+++I+G VQN L AL L+ MR+ ++ +T + L A + L L+Q +H +L K
Sbjct: 389 SAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTK 448
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS----SPNVAAWTALMNGYSHHGLGSE 482
T F S++ T LV +YS+CG++ A F+ I S +V W AL++GY HG G
Sbjct: 449 TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN 508
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVV 541
A+ +F M+ + PN TF L+AC +GLV EG+ +F M + Y + HYTC+V
Sbjct: 509 ALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIV 568
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
DLLGR+G L EA I +P E + +WGALL+AC N+++GE AA K+F L+ +
Sbjct: 569 DLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTG 628
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
YV+L+NIYA LG+W +R + ++ ++K PG S IE+ S
Sbjct: 629 NYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEIRS 671
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/526 (24%), Positives = 240/526 (45%), Gaps = 57/526 (10%)
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
+ R+ L+ + ++L+ A S+ K +HC V+ G + S L YA C
Sbjct: 6 LRRAKNALSVKQYQSLLNHYAATQSISKTKALHCHVITGGRVSGHIL-STLSVTYALCGH 64
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I A+++FDE+ + + L +++++ YV+ L DA +VFI+M
Sbjct: 65 IAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRM------------------ 106
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ E + +P+ YT+ V +A L + G V+HG +++ F D+
Sbjct: 107 -------------VSEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKY 153
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN-RLTEA 313
+ AL+ Y + A V+D ++N + + N++I+G G + DA ++F+ + E
Sbjct: 154 VQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEG 213
Query: 314 NSISYNSMIKGYAVYGQVD------------DSKRLFEKMPHRSII--------SLNTMI 353
+ +++ V G + + KRL +K+ ++ + ++
Sbjct: 214 VDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEAR 273
Query: 354 SVIPEMERNPV-TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
V MER V TW MI+GY+++ E AL+L M+ + T + L AC
Sbjct: 274 FVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDAL 333
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
L G+ LH ++ S++ + TSL+ MY++C I+ FS S + W+A++
Sbjct: 334 KLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIA 393
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
G + L +A+ LF+ M +D+ PN AT +L A + + M I + G +
Sbjct: 394 GCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMS 453
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEF---IKDMPIELDAVVWGALLSA 575
+L+ T +V + + G L A + I++ D V+WGAL+S
Sbjct: 454 SLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISG 499
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 172/453 (37%), Gaps = 125/453 (27%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
+CGR + AR +F +M R V++W M+ GY + + +L L M V+ N T
Sbjct: 265 KCGRMDE---ARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 87 FSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH 146
++++S C L DGK +H ++ + + L+ YA C I+ RVF
Sbjct: 322 IASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGAS 381
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
++ WS ++ G VQ L+ DA D+F +M ++DV
Sbjct: 382 RNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDV------------------------- 416
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGC 266
PN T +S++ A A L + +H L K GF L+ Y C
Sbjct: 417 --------EPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKC 468
Query: 267 EAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS----ISYNSMI 322
G +E A IFN + E + + + ++I
Sbjct: 469 -------------------------------GTLESAHKIFNGIQEKHKSKDVVLWGALI 497
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
GY ++G ++ ++F EM R+ VT N +
Sbjct: 498 SGYGMHGDGHNALQVF------------------MEMVRSGVTPNEI------------- 526
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV---KTPFESNVYVGTSL 439
TF+ +ACS G +++G L + ++ KT SN Y T +
Sbjct: 527 -----------------TFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHY--TCI 567
Query: 440 VDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
VD+ R G +++A ++I P W AL+
Sbjct: 568 VDLLGRAGRLDEAYNLITTIPFEPTSTIWGALL 600
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 190/615 (30%), Positives = 303/615 (49%), Gaps = 57/615 (9%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TF+++L +CA L G+ +H + G + + L YA
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYA--------------- 105
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKL 204
+C +DA VF +MP +D V W L++GYA+ +G + A+++
Sbjct: 106 ----------------KCRRPADARRVFDRMPVRDRVAWNALVAGYAR--NGLARMAMEM 147
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
M+E P+ T SV+ ACA A + H I+ G E ++ A+++ YC
Sbjct: 148 VVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYC 207
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNS 320
C A V+D + + N++I+G G +A +FNR+ E +S +
Sbjct: 208 KCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLA 267
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIIS----LNTMIS-------------VIPEMER-N 362
++ G +D+ R+ E + + S +N +I+ V E++R
Sbjct: 268 ALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRT 327
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
V+WN+MI G QN E A++L+ M+ + T + A + + Q + +H
Sbjct: 328 QVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHG 387
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+ ++ + +VYV T+L+DMY++CG +N A+ F+S +V W A+++GY HG G
Sbjct: 388 YSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKA 447
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVV 541
AV LFE M IVPN TF+ VLSAC AGLV+EG + F SMK YG+ P +EHY +V
Sbjct: 448 AVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMV 507
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
DLLGR+G L EA FI+ MP++ V+GA+L AC N+E+ E +AQK+F L +
Sbjct: 508 DLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGV 567
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNV 661
+V+L+NIYA W +R + ++K PG S I+L + +H F N+
Sbjct: 568 YHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKE 627
Query: 662 IYATLEHLTANLNSV 676
IY+ L L + +V
Sbjct: 628 IYSRLAKLIEEIKAV 642
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 208/467 (44%), Gaps = 60/467 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNETTFSTILSVCA 95
AR +FD+MP+R V+WN ++ GY++ ++ +V M + + T ++L CA
Sbjct: 113 ARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACA 172
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+L ++ H ++SG E V + +L Y C +I A+ VFD + N + W+
Sbjct: 173 NARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNA 232
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
M+ GY Q +G ++ +AL LF M E G ++
Sbjct: 233 MIDGYAQ--------------------------NGDSR------EALALFNRMVEEGVDV 260
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+ + + ++AC LG EG VH LL++ G + + S+ ALI Y C+ D A V
Sbjct: 261 -TDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHV 319
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
+D L+ + N++I G G EDA +F R+ N + +S + D S
Sbjct: 320 FDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN-VKPDSFTLVSVIPALADISD 378
Query: 336 RLFEKMPHRSIISLNT-----MISVIPEM------------------ERNPVTWNSMISG 372
L + H I L+ +++ + +M ER+ +TWN+MI G
Sbjct: 379 PLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHG 438
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFES 431
Y + + A++L+ M+ + I +TF + ACS G + +G+ + + E
Sbjct: 439 YGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEP 498
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
+ ++VD+ R G +++A A + P ++ + A++ H
Sbjct: 499 GMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLH 545
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 153/360 (42%), Gaps = 77/360 (21%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD MP + VSWN M+ GY++ E+L+L + M V + + + L
Sbjct: 210 GDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAAL 269
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C +L L +G ++H L+++ G + V + L+ Y+ C ++ A VFDEL ++
Sbjct: 270 QACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQV 329
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M++G Q DA +F +M ++V
Sbjct: 330 SWNAMILGCAQNGCSEDAVRLFTRMQLENV------------------------------ 359
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+ +T SVI A A + + + +HG I+ + D + ALI+ Y C
Sbjct: 360 ---KPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC----- 411
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
GR+ A ++FN E + I++N+MI GY +G
Sbjct: 412 --------------------------GRVNIARILFNSARERHVITWNAMIHGYGSHGFG 445
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
+ LFE+M I ++P N T+ S++S L ++ + + +M++
Sbjct: 446 KAAVELFEEMKS---------IGIVP----NETTFLSVLSACSHAGLVDEGREYFTSMKE 492
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 33/217 (15%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N IT + ++ A ++FD++ RT VSWN M+ G ++ ++++ L + M NVK
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T +++ A ++ + + IH ++ + +V + L+ YA C + A+ +
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F+ E + + W+ M+ GY G+ K+ A
Sbjct: 421 FNSARERHVITWNAMIHGYGS--------------------------HGFGKA------A 448
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
++LF M+ G +PNE TF SV+ AC+ G EG+
Sbjct: 449 VELFEEMKSIG-IVPNETTFLSVLSACSHAGLVDEGR 484
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 2/193 (1%)
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
AL ++ M TF+ L C+ G L G+ +HA L +S T+L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV-LLFEIMLEQDIVPNAA 500
MY++C DA+ F + + AW AL+ GY+ +GL A+ ++ + E+ P++
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
T V VL AC A + + G+ + T ++D + G + A M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 561 PIELDAVVWGALL 573
P + ++V W A++
Sbjct: 223 PTK-NSVSWNAMI 234
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 190/615 (30%), Positives = 303/615 (49%), Gaps = 57/615 (9%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TF+++L +CA L G+ +H + G + + L YA
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYA--------------- 105
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK-ALKL 204
+C +DA VF +MP +D V W L++GYA+ +G + A+++
Sbjct: 106 ----------------KCRRPADARRVFDRMPVRDRVAWNALVAGYAR--NGLARMAMEM 147
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
M+E P+ T SV+ ACA A + H I+ G E ++ A+++ YC
Sbjct: 148 VVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYC 207
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNS 320
C A V+D + + N++I+G G +A +FNR+ E +S +
Sbjct: 208 KCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLA 267
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIIS----LNTMIS-------------VIPEMER-N 362
++ G +D+ R+ E + + S +N +I+ V E++R
Sbjct: 268 ALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRT 327
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
V+WN+MI G QN E A++L+ M+ + T + A + + Q + +H
Sbjct: 328 QVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHG 387
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+ ++ + +VYV T+L+DMY++CG +N A+ F+S +V W A+++GY HG G
Sbjct: 388 YSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKA 447
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVV 541
AV LFE M IVPN TF+ VLSAC AGLV+EG + F SMK YG+ P +EHY +V
Sbjct: 448 AVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMV 507
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
DLLGR+G L EA FI+ MP++ V+GA+L AC N+E+ E +AQK+F L +
Sbjct: 508 DLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGV 567
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNV 661
+V+L+NIYA W +R + ++K PG S I+L + +H F N+
Sbjct: 568 YHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKE 627
Query: 662 IYATLEHLTANLNSV 676
IY+ L L + +V
Sbjct: 628 IYSRLAKLIEEIKAV 642
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 208/467 (44%), Gaps = 60/467 (12%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH-RSNVKLNETTFSTILSVCA 95
AR +FD+MP+R V+WN ++ GY++ ++ +V M + + T ++L CA
Sbjct: 113 ARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACA 172
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+L ++ H ++SG E V + +L Y C +I A+ VFD + N + W+
Sbjct: 173 NARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNA 232
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
M+ GY Q +G ++ +AL LF M E G ++
Sbjct: 233 MIDGYAQ--------------------------NGDSR------EALALFNRMVEEGVDV 260
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+ + + ++AC LG EG VH LL++ G + + S+ ALI Y C+ D A V
Sbjct: 261 -TDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHV 319
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
+D L+ + N++I G G EDA +F R+ N + +S + D S
Sbjct: 320 FDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN-VKPDSFTLVSVIPALADISD 378
Query: 336 RLFEKMPHRSIISLNT-----MISVIPEM------------------ERNPVTWNSMISG 372
L + H I L+ +++ + +M ER+ +TWN+MI G
Sbjct: 379 PLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHG 438
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFES 431
Y + + A++L+ M+ + I +TF + ACS G + +G+ + + E
Sbjct: 439 YGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEP 498
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
+ ++VD+ R G +++A A + P ++ + A++ H
Sbjct: 499 GMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLH 545
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 153/360 (42%), Gaps = 77/360 (21%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD MP + VSWN M+ GY++ E+L+L + M V + + + L
Sbjct: 210 GDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAAL 269
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C +L L +G ++H L+++ G + V + L+ Y+ C ++ A VFDEL ++
Sbjct: 270 QACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQV 329
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M++G Q DA +F +M ++V
Sbjct: 330 SWNAMILGCAQNGCSEDAVRLFTRMQLENV------------------------------ 359
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+ +T SVI A A + + + +HG I+ + D + ALI+ Y C
Sbjct: 360 ---KPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC----- 411
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
GR+ A ++FN E + I++N+MI GY +G
Sbjct: 412 --------------------------GRVNIARILFNSARERHVITWNAMIHGYGSHGFG 445
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
+ LFE+M I ++P N T+ S++S L ++ + + +M++
Sbjct: 446 KAAVELFEEMKS---------IGIVP----NETTFLSVLSACSHAGLVDEGREYFTSMKE 492
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 33/217 (15%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N IT + ++ A ++FD++ RT VSWN M+ G ++ ++++ L + M NVK
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+ T +++ A ++ + + IH ++ + +V + L+ YA C + A+ +
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F+ E + + W+ M+ GY G+ K+ A
Sbjct: 421 FNSARERHVITWNAMIHGYGS--------------------------HGFGKA------A 448
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
++LF M+ G +PNE TF SV+ AC+ G EG+
Sbjct: 449 VELFEEMKSIG-IVPNETTFLSVLSACSHAGLVDEGR 484
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 2/193 (1%)
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
AL ++ M TF+ L C+ G L G+ +HA L +S T+L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV-LLFEIMLEQDIVPNAA 500
MY++C DA+ F + + AW AL+ GY+ +GL A+ ++ + E+ P++
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
T V VL AC A + + G+ + T ++D + G + A M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 561 PIELDAVVWGALL 573
P + ++V W A++
Sbjct: 223 PTK-NSVSWNAMI 234
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 274/540 (50%), Gaps = 58/540 (10%)
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
P + + LI + ++ E AL LF M + P+++T + +++C+R+
Sbjct: 131 PPRSARSYNILIRSFLRA-GHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSV 189
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
G+ V K GF D+ + +LI Y C A ++ ++ + A N++I G +
Sbjct: 190 GRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVK 249
Query: 297 MGRIEDAELIFN----------------------RLTEANSISY---------------- 318
G ++ +F RL +AN +
Sbjct: 250 NGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNL 309
Query: 319 -NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+++ YA G++D ++RLF++M R + V W++MISGY Q++
Sbjct: 310 ATALVDMYAKCGELDKARRLFDRMHSRDV-----------------VAWSAMISGYTQSD 352
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
+AL ++ M+ ++ T + AC+ LG+L+ G+ +H+++ + V +GT
Sbjct: 353 RCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGT 412
Query: 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP 497
+LVD Y++CG I DA +F S+ N WTAL+ G + +G EA+ LF MLE +I P
Sbjct: 413 ALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEP 472
Query: 498 NAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEF 556
TF+GVL AC LV EG + F SM + YG+ P +EHY C+VDLLGR+G + EA +F
Sbjct: 473 TDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQF 532
Query: 557 IKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616
I++MPIE +AVVW ALLSAC N+E+GE A +++ LD Y++LSN YA +G+W
Sbjct: 533 IRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQW 592
Query: 617 GKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
+RK + V+K PGCS IEL + F ED +P IY + + N+ V
Sbjct: 593 KNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMV 652
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 183/426 (42%), Gaps = 55/426 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G +V A LF + ++ V++WN M+ GY K + E + + M +E T ++
Sbjct: 220 GDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVA 279
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ C +L G+ I + G + + L+ YA C E+++A+R+FD +H + +
Sbjct: 280 TACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVV 339
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS M+ GY Q D C +AL +F M+ +
Sbjct: 340 AWSAMISGYTQS--------------------------------DRCREALAIFNEMQGT 367
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
N PN+ T SV+ ACA LGA GK VH + + +G AL++FY C
Sbjct: 368 EVN-PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKD 426
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIKGYAV 327
A++ ++ + +LI G+ S GR +A +F+ + EAN +++ ++ +
Sbjct: 427 AVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSH 486
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
V++ +R F S+ + P +E + M+ + L ++A Q
Sbjct: 487 GCLVEEGRRHF--------TSMTQDYGICPRIEH----YGCMVDLLGRAGLIDEAYQF-- 532
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVDMYSRC 446
+R + I+ + L AC+ +++ G+ +V P S Y+ L + Y+
Sbjct: 533 -IRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYI--LLSNTYASV 589
Query: 447 GSINDA 452
G +A
Sbjct: 590 GQWKNA 595
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/518 (21%), Positives = 218/518 (42%), Gaps = 73/518 (14%)
Query: 45 PIRTVVSWNTMLCGYSKWAKFDESLSL-VSTMHRSNVKLNETTFSTILSVCAQLNSLIDG 103
P R+ S+N ++ + + +++L L V + + V ++ T + + C+++ L G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
+ + K G+ +FV + L+ YA+C ++ A +F +
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQ----------------- 233
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDS 223
K V+ W +I+GY K+ D E +++F+ M E +E T S
Sbjct: 234 --------------VKGVIAWNAMIAGYVKNGDWKE-VVEMFKGMLEVRAPF-DEVTLLS 277
Query: 224 VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPC 283
V AC RLG G+ + + G ++ AL++ Y C D A R++DR+ +
Sbjct: 278 VATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRD 337
Query: 284 LNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFE 339
+ A +++I+G R +A IFN + N ++ S++ AV G ++ K +
Sbjct: 338 VVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHS 397
Query: 340 KMPHRSI---ISLNTMI-----------SVIPEMERNPV----TWNSMISGYVQNNLHEK 381
+ + + + L T + + E PV TW ++I G N +
Sbjct: 398 YIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSRE 457
Query: 382 ALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLV 440
AL+L+ +M + I+ T TF + ACS +++G+ + + + +V
Sbjct: 458 ALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMV 517
Query: 441 DMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIV 496
D+ R G I++A ++ PN W AL++ + H +G EA+ + IV
Sbjct: 518 DLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEAL--------KQIV 569
Query: 497 P----NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
P ++ ++ + + G + + MK GV
Sbjct: 570 PLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGV 607
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 2/220 (0%)
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQ 415
P R+ ++N +I +++ E AL L++ M A+ + T + +CS + L
Sbjct: 129 PHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLS 188
Query: 416 QGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYS 475
G+ + A+ K F + +V SL+ MY+ CG + A F ++ V AW A++ GY
Sbjct: 189 VGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYV 248
Query: 476 HHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLE 535
+G E V +F+ MLE + T + V +AC R G N G I + G++ +
Sbjct: 249 KNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRN 308
Query: 536 HYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
T +VD+ + G L +A M D V W A++S
Sbjct: 309 LATALVDMYAKCGELDKARRLFDRMH-SRDVVAWSAMISG 347
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 307/638 (48%), Gaps = 83/638 (13%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
+FD + V +NT+ Y E+L L M R V NE T ++ C + +
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
+ +H + LK G+ FV + LL YA+ + +++R FDE
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDE--------------- 105
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
M ++VV W +I GYA++ D +A LF MR G + +E+
Sbjct: 106 ----------------MAGRNVVSWNSMIGGYAQAGD-TREACALFGEMRRQG-FLGDEF 147
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T S++ AC++ G G++VH L++ G D +GGAL++ Y C
Sbjct: 148 TLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKC------------- 194
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFE 339
G + A F + + +S+ SM+ +G VD ++ F+
Sbjct: 195 ------------------GDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFD 236
Query: 340 KMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
MP ERN V+WN+MIS YVQ + +AL LY M+ +
Sbjct: 237 HMP-----------------ERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEA 279
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
T + AC +G L G+++H ++ ++ + SL+DMY++CG ++ A F +
Sbjct: 280 TLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREM 339
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
+ NV +W ++ G + HG +A+ F M+ ++ P+ TFV +LS+C GL+ G
Sbjct: 340 CNRNVVSWNVIIGGLAMHGRALDAITFFRSMV-RNTSPDGITFVALLSSCSHGGLLETGQ 398
Query: 520 KIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
F SM+ Y V +EHY C+VDLLGR GHL +A IK+MP++ D VVWGALL AC
Sbjct: 399 HYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRI 458
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
N+++G++ +++ L+ +V++SN+ +W +RK + +KD G S
Sbjct: 459 HGNVKIGKQVIKQLLELEGISGGLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMGVS 518
Query: 639 WIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNSV 676
IE+N+ +H F VED + + + IYA ++ L+ +L SV
Sbjct: 519 SIEINNSIHEFGVEDIRHESSSEIYAVVDQLSYHLISV 556
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 159/315 (50%), Gaps = 5/315 (1%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L +R FD+M R VVSWN+M+ GY++ E+ +L M R +E T +++L
Sbjct: 94 GSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACALFGEMRRQGFLGDEFTLASLL 153
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+Q +L G+ +HCL+L SG +G L+ Y+ C ++ A+R F+ + + +
Sbjct: 154 LACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEMMPIKSVV 213
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ML + + A F MP+++ V W +IS Y + E AL L++ M+
Sbjct: 214 SWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHE-ALDLYKQMQSH 272
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
G P+E T V+ AC R+G GK+VH + D S+ +L++ Y C D
Sbjct: 273 GP-APDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMYAKCGQVDT 331
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN---RLTEANSISYNSMIKGYAVY 328
A+R++ + N + + N +I GL GR DA F R T + I++ +++ +
Sbjct: 332 AIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSMVRNTSPDGITFVALLSSCSHG 391
Query: 329 GQVDDSKRLFEKMPH 343
G ++ + FE M H
Sbjct: 392 GLLETGQHYFESMRH 406
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 3/175 (1%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS + ++G + AR FD MP R VSWNTM+ Y + ++ E+L L M
Sbjct: 212 VVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQS 271
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+E T +LS C ++ L GK +H + + + + + LL YA C +++
Sbjct: 272 HGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMYAKCGQVDT 331
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK---DVVVWTKLIS 189
A R+F E+ N + W++++ G DA F M + D + + L+S
Sbjct: 332 AIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSMVRNTSPDGITFVALLS 386
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 175/522 (33%), Positives = 271/522 (51%), Gaps = 53/522 (10%)
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
++V +Q + A +F +PK V ++ KLI Y+ S + L+ M G +
Sbjct: 22 LIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYS-SHGPHHQCFSLYTQMCLQGCS- 79
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
PNE++F + ACA L + +G+++H +K GF GC+ F
Sbjct: 80 PNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGF---------------GCDVF------ 118
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
A +L++ +G + A F+ +T + ++NSMI GYA G ++ +
Sbjct: 119 ----------ALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGAL 168
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
LF MP R++ S W +MISGY QN + KAL +++ M +
Sbjct: 169 ELFRLMPARNVTS-----------------WTAMISGYAQNGQYAKALSMFLMMEEETEM 211
Query: 396 RTRS-TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
R T + + AC+ LG+L+ G+ + + + N+YV +L++MY+RCG I+ A
Sbjct: 212 RPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWG 271
Query: 455 SFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F I N+ +W +++ G + HG EA+ LF ML + P+ TFVGVL AC G
Sbjct: 272 VFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGG 331
Query: 514 LVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+V EG F SM + + + P LEHY C+VDLLGR+G L EA + I MP+E D+VVWG L
Sbjct: 332 MVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTL 391
Query: 573 LSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
L AC F ++E+ E+AA +F L+ YVILSNIYA G+W +RK + ++
Sbjct: 392 LGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKIT 451
Query: 633 KDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
K G S+IE +H F VEDR++ + IYA L+ ++ +
Sbjct: 452 KAAGYSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMK 493
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 10/312 (3%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A LFD +P TV +N ++ YS + SL + M NE +F+ + S CA
Sbjct: 35 AHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACAS 94
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L+S G+ +H +KSG+ C F + L+ YA + A++ FDE+ + W+ M
Sbjct: 95 LSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSM 154
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ GY +C + A ++F MP ++V WT +ISGYA++ KAL +F M E E P
Sbjct: 155 IAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQ-YAKALSMFLMMEEETEMRP 213
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
NE T SV+ ACA LGA G+ + G+ + + AL+E Y C D A V+
Sbjct: 214 NEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVF 273
Query: 277 DRLE---NPCLNASNSLINGLISMGRIEDA-ELIFNRLTEA---NSISYNSMIKGYAVYG 329
+ ++ N C + NS+I GL GR ++A EL + L E + +++ ++ G
Sbjct: 274 EEIDGRRNLC--SWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGG 331
Query: 330 QVDDSKRLFEKM 341
V + + FE M
Sbjct: 332 MVVEGQHFFESM 343
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 139/328 (42%), Gaps = 70/328 (21%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRSNV 80
N I R G L A LF MP R V SW M+ GY++ ++ ++LS+ M + +
Sbjct: 152 NSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEM 211
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ NE T +++L CA L +L G++I +GY +V + LL YA C I++A
Sbjct: 212 RPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWG 271
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CE 199
VF+E+ ++++ W +I G A V G C+
Sbjct: 272 VFEEID------------------------------GRRNLCSWNSMIMGLA--VHGRCD 299
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+A++LF M G P++ TF V+ AC G VV G E D SI L
Sbjct: 300 EAIELFYKMLREGA-APDDVTFVGVLLACTH-----GGMVVEGQHFFESMERDFSIAPKL 353
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNRLTEANSISY 318
+ C +++ L G + +A +LI E +S+ +
Sbjct: 354 EHYGC-------------------------MVDLLGRAGELREAHDLILRMPMEPDSVVW 388
Query: 319 NSMIKGYAVYGQVDDSKR----LFEKMP 342
+++ + +G V+ +++ LFE P
Sbjct: 389 GTLLGACSFHGHVELAEKAAGALFELEP 416
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 172/571 (30%), Positives = 302/571 (52%), Gaps = 42/571 (7%)
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
+E A+++FD + + + W +ML Y + +S+A VF +MP+ + WT L+S +A S
Sbjct: 8 VERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALS 67
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
E+A LF M+E + + ++ A + K + FD+
Sbjct: 68 -GHHEEAKTLFDTMQER-----DLIAWTIMLTVLATFSNIEDAK----------YHFDQM 111
Query: 255 IGGALIEFYCGCEA------FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
L+ + A + A +D++ L + SL++ G ++ A +F+
Sbjct: 112 PERDLVAWTAMLAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFD 171
Query: 309 RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------------V 355
+ E N +++ +M+ GY++ G V +KR F+ MP R +I+ M+S +
Sbjct: 172 SMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREI 231
Query: 356 IPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTM-RKLAIDR----TRSTFSVLFHACS 409
M ER+ ++W +M++ V+N+L E++ +L+ M R A+ + R TF L ACS
Sbjct: 232 FQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACS 291
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
LG+L +G+ +HA + + F++++ V +LV+ Y RCG++ DA+ F + +V +W++
Sbjct: 292 FLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSS 351
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSY 528
+++ ++ G EA+ L+ ML + +P+ F+ VL AC +G+V FRS+
Sbjct: 352 MISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDT 411
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
V PTLEHY C+VD+LGR+G L +AE+ ++ MP +++ +LSAC + ++E GE A
Sbjct: 412 QVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAA 471
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
A+ +F LD + S Y+ L+NIY+ + IRK + +KK PGCSWIE+ RVH
Sbjct: 472 AEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHE 531
Query: 649 FSVEDRNNPNCNVIYATLEHLTANLNSVVLF 679
F D+ +P + IYA ++ L + F
Sbjct: 532 FIAGDKMHPQRDEIYAEIQRLGRQMKEAGYF 562
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 172/384 (44%), Gaps = 74/384 (19%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
R+G L A+ +FD+MP ++ SW +L ++ +E+ +L TM ++ ++
Sbjct: 34 ARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDL----IAWT 89
Query: 89 TILSVCAQLNSLIDGK------QIHCLV--------------LKSGYECFE-------FV 121
+L+V A +++ D K LV +++ E F+ F
Sbjct: 90 IMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAANAERGQMENARETFDQMPERNLFS 149
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+ LL Y +++ A RVFD + E N + W+ ML GY + A F MP++D+
Sbjct: 150 WTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDL 209
Query: 182 VVWTKLISGYA--------KSV----------------------DGCEKALKLFRWMRE- 210
+ WT ++S YA + + D E++ +LF M
Sbjct: 210 IAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRH 269
Query: 211 ---SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
S PN TF +++ AC+ LGA EG+ +H + + GF+ D + AL+ FY C
Sbjct: 270 CALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCG 329
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK 323
A A V+D + + + +S+I+ GR+++A +++R+ T + I + S++
Sbjct: 330 ALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLF 389
Query: 324 GYAVYGQVDDSKRLFEKMPHRSII 347
+ G V+ S F RSI+
Sbjct: 390 ACSNSGVVEASGDFF-----RSIV 408
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 152/355 (42%), Gaps = 61/355 (17%)
Query: 297 MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI 356
+G +E A IF+ + + +S S+ M+ YA G + ++K +F++MP S+ S
Sbjct: 5 LGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGS-------- 56
Query: 357 PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL----------FH 406
W +++S + + HE+A L+ TM++ + +VL +H
Sbjct: 57 ---------WTALLSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYH 107
Query: 407 ------------ACSCLGSLQQGQLLHAH--LVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ ++GQ+ +A + P E N++ TSL+ Y R G + A
Sbjct: 108 FDQMPERDLVAWTAMLAANAERGQMENARETFDQMP-ERNLFSWTSLLSAYGRSGDVKAA 166
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
F S+ N+ AWTA++ GYS G A F+ M E+D++ + +LSA
Sbjct: 167 GRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLI----AWTAMLSAYAFN 222
Query: 513 GLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP--------IEL 564
G + +IF+ M ++ + +V L + L E++E MP +
Sbjct: 223 GHLRYTREIFQRMPERDLI----SWATMVAALVENDLLEESKELFDRMPRHCALSKGMTP 278
Query: 565 DAVVWGALLSACWFWMNMEVGER--AAQKMFGLDKKPISAYVILSNIYAVLGKWG 617
+ V + LL AC F + G + AA G D + + ++ N Y G G
Sbjct: 279 NRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALV-NFYGRCGALG 332
>gi|356541211|ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Glycine max]
Length = 548
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 171/563 (30%), Positives = 290/563 (51%), Gaps = 52/563 (9%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
+++ ++ + A+ +L GK++H ++ +G+ F V S L+ FY C ++ A+++FD
Sbjct: 29 SYAELIDMYARDRALHAGKKLHAHLVTNGFARFNVVASNLVSFYTCCGQLSHARKLFD-- 86
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
K+P +V W LI A+ + AL +F
Sbjct: 87 -----------------------------KIPTTNVRRWIALIGSCAR-CGFYDHALAVF 116
Query: 206 RWMRESGENMPNE-YTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
M+ PN + SV++AC +G G+ +HG ++KC FE D + +LI Y
Sbjct: 117 SEMQAVQGLTPNYVFVIPSVLKACGHVGDRITGEKIHGFILKCSFELDSFVSSSLIVMYS 176
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNS 320
C + A +V+D + A N+++ G + G +A + + + N +++NS
Sbjct: 177 KCAKVEDARKVFDGMTVKDTVALNAVVAGYVQQGAANEALGLVESMKLMGLKPNVVTWNS 236
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
+I G++ G +F M + +E + V+W S+ISG+VQN ++
Sbjct: 237 LISGFSQKGDQGRVSEIFRLM-------------IADGVEPDVVSWTSVISGFVQNFRNK 283
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+A + M T +T S L AC+ + G+ +H + + T E ++YV ++LV
Sbjct: 284 EAFDTFKQMLSHGFHPTSATISALLPACATAARVSVGREIHGYALVTGVEGDIYVRSALV 343
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP-NA 499
DMY++CG I++A+ FS + N W +++ G+++HG EA+ LF M ++ + +
Sbjct: 344 DMYAKCGFISEARNLFSRMPEKNTVTWNSIIFGFANHGYCEEAIELFNQMEKEGVAKLDH 403
Query: 500 ATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIK 558
TF L+AC G G ++F+ M+ Y + P LEHY C+VDLLGR+G LHEA IK
Sbjct: 404 LTFTAALTACSHVGDFELGQRLFKIMQEKYSIEPRLEHYACMVDLLGRAGKLHEAYCMIK 463
Query: 559 DMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618
MPIE D VWGALL+AC ++E+ E AA + L+ + + ++LS++YA GKWGK
Sbjct: 464 TMPIEPDLFVWGALLAACRNHRHVELAEVAAMHLMELEPESAANPLLLSSVYADAGKWGK 523
Query: 619 KMDIRKRLTHLEVKKDPGCSWIE 641
++KR+ +++K G SWIE
Sbjct: 524 FERVKKRIKKGKLRKLQGLSWIE 546
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 193/488 (39%), Gaps = 121/488 (24%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTF--ST 89
GQL AR LFD++P V W ++ ++ +D +L++ S M F +
Sbjct: 76 GQLSHARKLFDKIPTTNVRRWIALIGSCARCGFYDHALAVFSEMQAVQGLTPNYVFVIPS 135
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L C + I G++IH +LK +E FV S L+ Y+ C ++E+A++VFD + +
Sbjct: 136 VLKACGHVGDRITGEKIHGFILKCSFELDSFVSSSLIVMYSKCAKVEDARKVFDGMTVKD 195
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKS----------- 194
+ + ++ GYVQ ++A + M K +VV W LISG+++
Sbjct: 196 TVALNAVVAGYVQQGAANEALGLVESMKLMGLKPNVVTWNSLISGFSQKGDQGRVSEIFR 255
Query: 195 ---VDGCE--------------------KALKLFRWMRESGENMPNEYTFDSVIRACARL 231
DG E +A F+ M G + P T +++ ACA
Sbjct: 256 LMIADGVEPDVVSWTSVISGFVQNFRNKEAFDTFKQMLSHGFH-PTSATISALLPACATA 314
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
G+ +HG + G E D + AL++ Y C
Sbjct: 315 ARVSVGREIHGYALVTGVEGDIYVRSALVDMYAKC------------------------- 349
Query: 292 NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
G I +A +F+R+ E N++++NS+I G+A +G +++ LF +M + L+
Sbjct: 350 ------GFISEARNLFSRMPEKNTVTWNSIIFGFANHGYCEEAIELFNQMEKEGVAKLDH 403
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
+ TF+ ACS +
Sbjct: 404 L-----------------------------------------------TFTAALTACSHV 416
Query: 412 GSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTA 469
G + GQ L + K E + +VD+ R G +++A ++ P++ W A
Sbjct: 417 GDFELGQRLFKIMQEKYSIEPRLEHYACMVDLLGRAGKLHEAYCMIKTMPIEPDLFVWGA 476
Query: 470 LMNGYSHH 477
L+ +H
Sbjct: 477 LLAACRNH 484
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 36/236 (15%)
Query: 7 QSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIR----TVVSWNTMLCGYSKW 62
+S LM + +V+ N I+ + G +F M VVSW +++ G+ +
Sbjct: 220 ESMKLMGLKPNVVTWNSLISGFSQKGDQGRVSEIFRLMIADGVEPDVVSWTSVISGFVQN 279
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
+ E+ M T S +L CA + G++IH L +G E +V
Sbjct: 280 FRNKEAFDTFKQMLSHGFHPTSATISALLPACATAARVSVGREIHGYALVTGVEGDIYVR 339
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
S L+ YA C I EA+ +F + E N + W+ ++ G+
Sbjct: 340 SALVDMYAKCGFISEARNLFSRMPEKNTVTWNSIIFGFAN-------------------- 379
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
GY CE+A++LF M + G + TF + + AC+ +G F G+
Sbjct: 380 ------HGY------CEEAIELFNQMEKEGVAKLDHLTFTAALTACSHVGDFELGQ 423
>gi|147818972|emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
Length = 1817
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 271/506 (53%), Gaps = 34/506 (6%)
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259
+AL+ F M SG P ++ + + +CA+L + G +H +I+ GFE + + AL
Sbjct: 1299 EALESFXRMNTSG-TKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSAL 1357
Query: 260 IEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANS 315
++ Y C+A A RV+D +E + S+I+G GR ++A L F + + N
Sbjct: 1358 VDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNC 1417
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI------------------- 356
++Y S I + D L H ++ L +
Sbjct: 1418 VTYVSXISACTGLETIFDQCALL----HAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAV 1473
Query: 357 ----PEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412
+ER+ + +NSMISGY QN E+AL+L++ MR + T T + + +AC L
Sbjct: 1474 LLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLT 1533
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
LQQG+ +H+ + K ESNV+V ++L+DMYS+CGSI++A+ F N WT+++
Sbjct: 1534 ILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMIT 1593
Query: 473 GYSHHGLGSEAVLLFE-IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGV 530
GY+ G G E + LFE ++ E+ P+ F VL+AC AG +++G+ F M+ YG+
Sbjct: 1594 GYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGL 1653
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
VP L+ Y C+VDL R+GHL +A+E ++ P E ++V+WG+ LS+C + E+G AA
Sbjct: 1654 VPDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAAD 1713
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
K+F ++ + YV +++IYA G W + ++IRK + ++K G SW+E++ RVH F
Sbjct: 1714 KLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVHVFX 1773
Query: 651 VEDRNNPNCNVIYATLEHLTANLNSV 676
V D ++P I LE L + V
Sbjct: 1774 VADASHPRSRDICVELERLNLEMKEV 1799
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 205/505 (40%), Gaps = 125/505 (24%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
+V A+ +FD M VSW +++ G+SK + E++ M S +K N T+ + +S
Sbjct: 1367 IVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSXISA 1426
Query: 94 CAQLNSLIDG-KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
C L ++ D +H V+K G+ FV S L+ Y+ C I++A +F E + +L
Sbjct: 1427 CTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNIL 1486
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
++ M+ GY Q NL E+ALKLF MR +G
Sbjct: 1487 FNSMISGYSQ-NLXG-------------------------------EEALKLFVZMRNNG 1514
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
P ++T S++ AC L +G+ VH L+ K G E + + AL++ Y C
Sbjct: 1515 L-XPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKC------ 1567
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVD 332
G I++A +F + E N++ + SMI GYA G+
Sbjct: 1568 -------------------------GSIDEARCVFXQAVEKNTVLWTSMITGYAQSGRGP 1602
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
+ LFE++ V E G+ +++
Sbjct: 1603 EGLGLFERL-------------VXEE-------------GFTPDHI-------------- 1622
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSIND 451
F+ + AC+ G L +G + + ++ LVD+Y R G +
Sbjct: 1623 -------CFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRK 1675
Query: 452 AQASFSSIS-SPNVAAWTALMNG---YSHHGLGSEAV-LLFEIMLEQDIVP-NAATFVGV 505
A+ + PN W + ++ Y LG EA LF++ P + A +V +
Sbjct: 1676 AKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKME------PCSTAPYVAM 1729
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGV 530
S +AGL +E ++I + MK G+
Sbjct: 1730 ASIYAQAGLWSEVVEIRKLMKQKGL 1754
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
++CGR Q V LF R + +N+M+ GYS+ +E+L L M + + +
Sbjct: 1464 SKCGRIDQAVL---LFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDH 1520
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
T ++IL+ C L L G+Q+H LV K G E FV S LL Y+ C I+EA+ VF +
Sbjct: 1521 TLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQA 1580
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKM 176
E N +LW+ M+ GY Q + +F ++
Sbjct: 1581 VEKNTVLWTSMITGYAQSGRGPEGLGLFERL 1611
>gi|356509350|ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Glycine max]
Length = 678
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 183/628 (29%), Positives = 309/628 (49%), Gaps = 56/628 (8%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
S N ++ ++G L A +LF+ MP + + WN+++ YS+ ++L L +M+
Sbjct: 100 SWNMVVSAFAKSGHLQLAHSLFNAMPSKNHLVWNSIIHSYSRHGHPGKALFLFKSMNLDP 159
Query: 80 VKL---NETTFSTILSVCAQLNSLIDGKQIHCLVLKSG--YECFEFVGSGLLFFYANCFE 134
++ + +T L CA +L GKQ+H V G E + S L+ Y C +
Sbjct: 160 SQIVYRDAFVLATALGACADSLALNCGKQVHARVFVDGMGLELDRVLCSSLINLYGKCGD 219
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
++ A R+ + + +E S ++ GY M +A VF V+W +ISGY +
Sbjct: 220 LDSAARIVSFVRDVDEFSLSALISGYANAGRMREARSVFDSKVDPCAVLWNSIISGYVSN 279
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ E A+ LF M +G + +++ A + L K +H K G D
Sbjct: 280 GEEVE-AVNLFSAMLRNGVQ-GDASAVANILSAASGLLVVELVKQMHVYACKAGVTHDIV 337
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
+ +L++ Y C++ PC +A +F+ L E +
Sbjct: 338 VASSLLDAYSKCQS-------------PC------------------EACKLFSELKEYD 366
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
+I N+MI Y+ G+++D+K +F MP +++IS WNS++ G
Sbjct: 367 TILLNTMITVYSNCGRIEDAKLIFNTMPSKTLIS-----------------WNSILVGLT 409
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVY 434
QN +AL ++ M KL + R +F+ + AC+C SL+ G+ + + ES+
Sbjct: 410 QNACPSEALNIFSQMNKLDLKMDRFSFASVISACACRSSLELGEQVFGKAITIGLESDQI 469
Query: 435 VGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
+ TSLVD Y +CG + + F + + +W ++ GY+ +G G EA+ LF M
Sbjct: 470 ISTSLVDFYCKCGFVEIGRKVFDGMVKTDEVSWNTMLMGYATNGYGIEALTLFCEMTYGG 529
Query: 495 IVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEA 553
+ P+A TF GVLSAC +GLV EG +F +MK SY + P +EH++C+VDL R+G+ EA
Sbjct: 530 VWPSAITFTGVLSACDHSGLVEEGRNLFHTMKHSYNINPGIEHFSCMVDLFARAGYFEEA 589
Query: 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVL 613
+ I++MP + DA +W ++L C N +G+ AA+++ L+ + AY+ LSNI A
Sbjct: 590 MDLIEEMPFQADANMWLSVLRGCIAHGNKTIGKMAAEQIIQLEPENTGAYIQLSNILASS 649
Query: 614 GKWGKKMDIRKRLTHLEVKKDPGCSWIE 641
G W +R+ + +K PGCSW +
Sbjct: 650 GDWEGSALVRELMRDKHFQKIPGCSWAD 677
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 217/511 (42%), Gaps = 53/511 (10%)
Query: 98 NSLIDGKQIHCLVLKSG-YECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
++L +G+Q+H LK+G V + LL Y+ C +++A +FDE+ + N W+ +
Sbjct: 14 STLREGRQLHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASHLFDEMPQTNSFSWNTL 73
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD-------------------- 196
+ ++ A +F MP K W ++S +AKS
Sbjct: 74 VQAHLNSGHTHSALHLFNAMPHKTHFSWNMVVSAFAKSGHLQLAHSLFNAMPSKNHLVWN 133
Query: 197 ----------GCEKALKLFRWMRESGENM--PNEYTFDSVIRACARLGAFCEGKVVHGLL 244
KAL LF+ M + + + + + ACA A GK VH +
Sbjct: 134 SIIHSYSRHGHPGKALFLFKSMNLDPSQIVYRDAFVLATALGACADSLALNCGKQVHARV 193
Query: 245 I--KCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
G E D + +LI Y C D A R+ + + + ++LI+G + GR+ +
Sbjct: 194 FVDGMGLELDRVLCSSLINLYGKCGDLDSAARIVSFVRDVDEFSLSALISGYANAGRMRE 253
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
A +F+ + ++ +NS+I GY G+ ++ LF M + + ++ I
Sbjct: 254 ARSVFDSKVDPCAVLWNSIISGYVSNGEEVEAVNLFSAMLRNGVQGDASAVANIL----- 308
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
S SG + + E Q+++ K + S L A S S + L +
Sbjct: 309 -----SAASGLL---VVELVKQMHVYACKAGVTHDIVVASSLLDAYSKCQSPCEACKLFS 360
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
L E + + +++ +YS CG I DA+ F+++ S + +W +++ G + + SE
Sbjct: 361 ELK----EYDTILLNTMITVYSNCGRIEDAKLIFNTMPSKTLISWNSILVGLTQNACPSE 416
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
A+ +F M + D+ + +F V+SAC + G ++F + G+ T +VD
Sbjct: 417 ALNIFSQMNKLDLKMDRFSFASVISACACRSSLELGEQVFGKAITIGLESDQIISTSLVD 476
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ G + + M ++ D V W +L
Sbjct: 477 FYCKCGFVEIGRKVFDGM-VKTDEVSWNTML 506
>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Glycine max]
Length = 770
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 181/636 (28%), Positives = 324/636 (50%), Gaps = 84/636 (13%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
+CG N A +F +P V++ TM+ G ++ + E+ L M R ++++
Sbjct: 184 AKCGLNAD---ALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSV 240
Query: 86 TFSTILSVCAQ----------LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+ S++L VCA+ +++ GKQ+H L +K G+E + + LL YA ++
Sbjct: 241 SLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDM 300
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
+ A++VF + + + VV W +I+GY
Sbjct: 301 DSAEKVF-------------------------------VNLNRHSVVSWNIMIAGYGNRC 329
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+ EKA + + M+ G P++ T+ +++ AC + G G+ + C +
Sbjct: 330 NS-EKAAEYLQRMQSDGYE-PDDVTYINMLTACVKSGDVRTGRQI----FDCMPCPSLTS 383
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF---NRLTE 312
A++ Y A+ ++ +++ C + + + ++S AEL F +
Sbjct: 384 WNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILS----SCAELGFLEAGKEVH 439
Query: 313 ANSISY---------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNP 363
A S + +S+I Y+ G+++ SK +F K+P E +
Sbjct: 440 AASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLP-----------------ELDV 482
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
V WNSM++G+ N+L + AL + MR+L + +F+ + +C+ L SL QGQ HA
Sbjct: 483 VCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQ 542
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
+VK F +++VG+SL++MY +CG +N A+ F + N W +++GY+ +G G A
Sbjct: 543 IVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNA 602
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVD 542
+ L+ M+ P+ T+V VL+AC + LV+EG++IF +M + YGVVP + HYTC++D
Sbjct: 603 LCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCIID 662
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISA 602
L R+G +E E + MP + DAVVW +LS+C N+ + +RAA++++ LD + ++
Sbjct: 663 CLSRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQNSAS 722
Query: 603 YVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
YV+L+N+Y+ LGKW +R ++H +V+KDPG S
Sbjct: 723 YVLLANMYSSLGKWDDAHVVRDLMSHNQVRKDPGYS 758
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 145/575 (25%), Positives = 266/575 (46%), Gaps = 75/575 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTML-----CGYSKWAKFDESLSLV 72
I S N + + L A LF QMP R VS NT++ CGY + ++L
Sbjct: 72 IFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYER-----QALDTY 126
Query: 73 STMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANC 132
++ V + TF+T+ S C L G++ H +V+K G E +V + LL YA
Sbjct: 127 DSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYA-- 184
Query: 133 FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYA 192
+C L +DA VF +P+ + V +T ++ G A
Sbjct: 185 -----------------------------KCGLNADALRVFRDIPEPNEVTFTTMMGGLA 215
Query: 193 KSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACAR----------LGAFCEGKVVHG 242
++ + ++A +LFR M G + + + S++ CA+ + +GK +H
Sbjct: 216 QT-NQIKEAAELFRLMLRKGIRV-DSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHT 273
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
L +K GFE D + +L++ Y D A +V+ L + + N +I G + E
Sbjct: 274 LSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEK 333
Query: 303 AELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE 358
A R+ E + ++Y +M+ G V +++F+ MP S+ S
Sbjct: 334 AAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQIFDCMPCPSLTS---------- 383
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
WN+++SGY QN H +A++L+ M+ R+T +V+ +C+ LG L+ G+
Sbjct: 384 -------WNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGK 436
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+HA K F +VYV +SL+++YS+CG + ++ FS + +V W +++ G+S +
Sbjct: 437 EVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSINS 496
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
LG +A+ F+ M + P+ +F V+S+C + + +G + + G + + +
Sbjct: 497 LGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGS 556
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
++++ + G ++ A F MP + V W ++
Sbjct: 557 SLIEMYCKCGDVNGARCFFDVMPGR-NTVTWNEMI 590
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 158/321 (49%), Gaps = 37/321 (11%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
+T C ++G + T R +FD MP ++ SWN +L GY++ A E++ L M +
Sbjct: 357 LTACVKSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDR 416
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
TT + ILS CA+L L GK++H K G+ +V S L+ Y+ C ++E +K VF
Sbjct: 417 TTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFS- 475
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
K+P+ DVV W +++G++ + G + AL
Sbjct: 476 ------------------------------KLPELDVVCWNSMLAGFSINSLG-QDALSF 504
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
F+ MR+ G P+E++F +V+ +CA+L + +G+ H ++K GF D +G +LIE YC
Sbjct: 505 FKKMRQLGF-FPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYC 563
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNS 320
C +GA +D + N +I+G G +A ++N + + + I+Y +
Sbjct: 564 KCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNALCLYNDMISSGEKPDDITYVA 623
Query: 321 MIKGYAVYGQVDDSKRLFEKM 341
++ + VD+ +F M
Sbjct: 624 VLTACSHSALVDEGLEIFNAM 644
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 417 GQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH 476
G+++HA L + S+ ++ +++YS+C I A F +I N+ +W A++ Y
Sbjct: 25 GKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKNIFSWNAILAAYCK 84
Query: 477 HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPT 533
A LF M ++ N + ++S VR G + + + S+ GV+P+
Sbjct: 85 ARNLQYACRLFLQMPQR----NTVSLNTLISTMVRCGYERQALDTYDSVMLDGVIPS 137
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 180/564 (31%), Positives = 294/564 (52%), Gaps = 65/564 (11%)
Query: 147 EDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS-VDGCEKALKLF 205
+ + +L + ++V Y + L+ +A +F +MP++DVV WT +I+GYA S + C A + F
Sbjct: 42 KKHHILATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSC--AWECF 99
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M + G + PNE+T SV+++C + G +VHG+++K G E + AL+ Y
Sbjct: 100 HEMFKQGRS-PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYAT 158
Query: 266 CE-AFDGAMRVYDRLENPCLNASNSLINGLISMGR------------IEDAEL------- 305
C + A ++ ++ +LI G +G +E+A++
Sbjct: 159 CSVTMEAAFLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITI 218
Query: 306 --------------------IFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
+ R ++N NS++ Y G + ++KR F +M +
Sbjct: 219 AVRASASIDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKD 278
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
+I+ NT+IS E+ER+ + +AL ++ TF+ L
Sbjct: 279 LITWNTLIS---ELERSDSS---------------EALLMFQRFESQGFVPNCYTFTSLV 320
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS-PNV 464
AC+ + +L GQ LH + + F NV + +L+DMY++CG I D++ F I N+
Sbjct: 321 AACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNL 380
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
+WT++M GY HG G+EAV LF+ M+ I P+ F+ VLSAC AGLV +G+K F
Sbjct: 381 VSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNV 440
Query: 525 MKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
M+S YG+ P + Y CVVDLLGR+G + EA E ++ MP + D WGA+L AC +
Sbjct: 441 MESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHTG 500
Query: 584 VGER-AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
+ R AA+K+ L + + YV+LS IYA GKW + +RK + + KK+ G SWIE+
Sbjct: 501 LISRLAAKKVMELKPRMVGTYVMLSYIYAAEGKWVEFARVRKMMRMMGNKKEAGMSWIEV 560
Query: 643 NSRVHAFSVEDRNNPNCNVIYATL 666
++V +F+V D+ PN + +Y+ L
Sbjct: 561 ENQVFSFAVSDKMCPNASSVYSVL 584
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 126/514 (24%), Positives = 224/514 (43%), Gaps = 86/514 (16%)
Query: 6 TQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK---- 61
T+S ++ I++TN I G + AR+LFD+MP R VV+W M+ GY+
Sbjct: 34 TESPPYKPKKHHILATN-LIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYN 92
Query: 62 ---WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECF 118
W F E M + NE T S++L C + L G +H +V+K G E
Sbjct: 93 SCAWECFHE-------MFKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGS 145
Query: 119 EFVGSGLLFFYANC-FEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
+V + L+ YA C +E A +F ++ N++ W
Sbjct: 146 LYVDNALMNMYATCSVTMEAAFLIFRDIKVKNDVTW------------------------ 181
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWM-RESGENMPNEYTFDSVIRACARLGAFCE 236
T LI+G+ DG LK+++ M E+ + P Y +RA A + +
Sbjct: 182 -------TTLITGFTHLGDGI-GGLKMYKQMLLENADVTP--YCITIAVRASASIDSVTT 231
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
GK +H ++K GF+ + + ++++FYC C A R + +E+ L N+LI+ L
Sbjct: 232 GKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISEL-E 290
Query: 297 MGRIEDAELIFNRLTE----ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR-------- 344
+A L+F R N ++ S++ A ++ ++L ++ R
Sbjct: 291 RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVEL 350
Query: 345 --SIISLNTMISVIPEME---------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393
++I + IP+ E RN V+W SM+ GY + +A++L+ M
Sbjct: 351 ANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSG 410
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF----ESNVYVGTSLVDMYSRCGSI 449
I R F + AC G +++G L + +++++ + + ++Y +VD+ R G I
Sbjct: 411 IRPDRIVFMAVLSACRHAGLVEKG-LKYFNVMESEYGINPDRDIY--NCVVDLLGRAGKI 467
Query: 450 NDAQASFSSIS-SPNVAAWTALM---NGYSHHGL 479
+A + P+ + W A++ + H GL
Sbjct: 468 GEAYELVERMPFKPDESTWGAILGACKAHKHTGL 501
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 292/610 (47%), Gaps = 59/610 (9%)
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL 145
TF+ +L +CA L G+ +H + G + L Y C +A+R
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARR----- 72
Query: 146 HEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLF 205
VF +MP +D V W +++GYA++ +
Sbjct: 73 --------------------------VFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVV 106
Query: 206 RWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
R E G P+ T SV+ ACA A + VH ++ G + ++ A+++ YC
Sbjct: 107 RMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCK 166
Query: 266 CEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRLTE----ANSISYN 319
C A + A V+D + P N+ N++I+G G +A +F R+ + S
Sbjct: 167 CGAVEAARAVFDCM--PVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVL 224
Query: 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIIS----LNTMISVIPEMER-------------- 361
+ ++ G +D+ +R+ E + + S N +I+ + +R
Sbjct: 225 AALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNK 284
Query: 362 -NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
++WN+MI G+ QN E A +L+ M+ + T + A + + Q + +
Sbjct: 285 KTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWI 344
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H + ++ + +VYV T+L+DMYS+CG ++ A+ F S +V W A+++GY HG G
Sbjct: 345 HGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFG 404
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTC 539
AV LFE M +PN TF+ VL+AC AGLV+EG K F SM K YG+ P +EHY
Sbjct: 405 QAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGT 464
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
+VDLLGR+G L EA FIK+MPIE V+GA+L AC N+E+ E +AQ +F L +
Sbjct: 465 MVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEE 524
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNC 659
+V+L+NIYA W +R + ++K PG S I+L + VH F N+ +
Sbjct: 525 GVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHA 584
Query: 660 NVIYATLEHL 669
IYA L L
Sbjct: 585 KDIYARLAKL 594
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 230/525 (43%), Gaps = 78/525 (14%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMH--RSNVKLNETTFSTILSVC 94
AR +FD+MP R V+WN ++ GY++ ++ V M + + T ++L C
Sbjct: 70 ARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPAC 129
Query: 95 AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWS 154
A +L +++H L++G + V + +L Y C +E A+ VFD + N + W+
Sbjct: 130 ADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWN 189
Query: 155 LMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN 214
M+ GY ++A +F +M ++ V V
Sbjct: 190 AMIDGYADNGNATEAMALFWRMVQEGVDV------------------------------- 218
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
+ + + ++AC LG E + VH LL++ G + S+ ALI Y C+ D A +
Sbjct: 219 --TDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQ 276
Query: 275 VYDRLENPCLNAS-NSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIK------ 323
V++ L N S N++I G EDAE +F R+ +S + S+I
Sbjct: 277 VFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADIS 336
Query: 324 ---------GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-----ERNPVTWNSM 369
GY++ Q+D + + + S +S+ + +R+ +TWN+M
Sbjct: 337 DPLQARWIHGYSIRHQLDQDVYVLTALI--DMYSKCGRVSIARRLFDSARDRHVITWNAM 394
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT-P 428
I GY + + A++L+ M+ +TF + ACS G + +GQ A + K
Sbjct: 395 IHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYG 454
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG---LGSE-A 483
E + ++VD+ R G +++A + ++ P ++ + A++ H L E A
Sbjct: 455 LEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESA 514
Query: 484 VLLFEIMLEQ--------DIVPNAATFVGVLSACVRAGLVNEGMK 520
++FE+ E+ +I NA+ + V A VR + +G++
Sbjct: 515 QIIFELGPEEGVYHVLLANIYANASMWKDV--ARVRTAMEKKGLQ 557
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 38/315 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD MP+R VSWN M+ GY+ E+++L M + V + + + L
Sbjct: 168 GAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAAL 227
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDEL-HEDNE 150
C +L L + +++H L+++ G V + L+ YA C + A +VF+EL ++
Sbjct: 228 QACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTR 287
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W+ M++G+ Q DA +F +M ++V
Sbjct: 288 ISWNAMILGFTQNECPEDAERLFARMQLENV----------------------------- 318
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
P+ +T SVI A A + + + +HG I+ + D + ALI+ Y C
Sbjct: 319 ----RPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVS 374
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYA 326
A R++D + + N++I+G S G + A +F + + N ++ S++ +
Sbjct: 375 IARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACS 434
Query: 327 VYGQVDDSKRLFEKM 341
G VD+ ++ F M
Sbjct: 435 HAGLVDEGQKYFASM 449
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 102/219 (46%), Gaps = 34/219 (15%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
TN IT + + A +F+++ +T +SWN M+ G+++ +++ L + M N
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLEN 317
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
V+ + T +++ A ++ + + IH ++ + +V + L+ Y+ C + A+
Sbjct: 318 VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIAR 377
Query: 140 RVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
R+FD + + + W+ M+ GY G+ ++
Sbjct: 378 RLFDSARDRHVITWNAMIHGYGS--------------------------HGFGQA----- 406
Query: 200 KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
A++LF M+ +G ++PNE TF SV+ AC+ G EG+
Sbjct: 407 -AVELFEEMKGTG-SLPNETTFLSVLAACSHAGLVDEGQ 443
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET 85
++CGR + AR LFD R V++WN M+ GY ++ L M + NET
Sbjct: 368 SKCGR---VSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNET 424
Query: 86 TFSTILSVCAQLNSLIDGKQIHCLVLKSGY 115
TF ++L+ C+ L+D Q + +K Y
Sbjct: 425 TFLSVLAACSHAG-LVDEGQKYFASMKKDY 453
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,203,345,667
Number of Sequences: 23463169
Number of extensions: 410928855
Number of successful extensions: 1135870
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10100
Number of HSP's successfully gapped in prelim test: 1484
Number of HSP's that attempted gapping in prelim test: 893026
Number of HSP's gapped (non-prelim): 79149
length of query: 680
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 530
effective length of database: 8,839,720,017
effective search space: 4685051609010
effective search space used: 4685051609010
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)