BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005732
(680 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/663 (32%), Positives = 350/663 (52%), Gaps = 87/663 (13%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I + N +T + G L A +LF MP R +WN+M+ G+++ + +E+L + MH+
Sbjct: 86 IYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK 145
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
LNE +F+++LS C+ LN + G Q+H L+ KS + ++GS L+ Y+ C + +
Sbjct: 146 EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND 205
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+RVFDE+ + N + W+ ++ + Q +A DVF M + V
Sbjct: 206 AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRV---------------- 249
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
P+E T SVI ACA L A G+ VHG ++K
Sbjct: 250 -----------------EPDEVTLASVISACASLSAIKVGQEVHGRVVK----------- 281
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
D+L N + SN+ ++ RI++A IF+ + N I+
Sbjct: 282 ------------------NDKLRNDII-LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
SMI GYA+ ++ +F KM R+++S WN++I+GY QN
Sbjct: 323 ETSMISGYAMAASTKAARLMFTKMAERNVVS-----------------WNALIAGYTQNG 365
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF------ES 431
+E+AL L+ +++ ++ T +F+ + AC+ L L G H H++K F E
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+++VG SL+DMY +CG + + F + + +W A++ G++ +G G+EA+ LF ML
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML 485
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHL 550
E P+ T +GVLSAC AG V EG F SM + +GV P +HYTC+VDLLGR+G L
Sbjct: 486 ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFL 545
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIY 610
EA+ I++MP++ D+V+WG+LL+AC N+ +G+ A+K+ ++ YV+LSN+Y
Sbjct: 546 EEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMY 605
Query: 611 AVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
A LGKW M++RK + V K PGCSWI++ H F V+D+++P I++ L+ L
Sbjct: 606 AELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILI 665
Query: 671 ANL 673
A +
Sbjct: 666 AEM 668
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 241/766 (31%), Positives = 368/766 (48%), Gaps = 123/766 (16%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+VS NK I ++ + A + F+ MP+R VVSWN+ML GY + + +S+ + M R
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ + TF+ IL VC+ L G QIH +V++ G + S LL YA E
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK------------------- 178
+ RVF + E N + WS ++ G VQ NL+S A F +M K
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 179 --------------------KDVVVWTKLISGYAKSVDGCEKALKLF----RWMRESGEN 214
D +V T + YAK D + A LF R+S
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAK-CDNMQDAQILFDNSENLNRQSYNA 352
Query: 215 MPNEYT---------------------FD-----SVIRACARLGAFCEGKVVHGLLIKCG 248
M Y+ FD V RACA + EG ++GL IK
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI-----NG--------LI 295
D + A I+ Y C+A A RV+D + + N++I NG +
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 296 SM--GRIEDAELIFNRLTEA---NSISYN--------------------SMIKGYAVYGQ 330
SM RIE E F + +A S+ Y S+I Y+ G
Sbjct: 473 SMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNP--------VTWNSMISGYVQNNLHEKA 382
+++++++ + R+ +S + E+E+ V+WNS+ISGYV E A
Sbjct: 533 IEEAEKIHSRFFQRANVS-----GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDA 587
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L+ M ++ I + T++ + C+ L S G+ +HA ++K +S+VY+ ++LVDM
Sbjct: 588 QMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDM 647
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
YS+CG ++D++ F + W A++ GY+HHG G EA+ LFE M+ ++I PN TF
Sbjct: 648 YSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 707
Query: 503 VGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+ +L AC GL+++G++ F MK YG+ P L HY+ +VD+LG+SG + A E I++MP
Sbjct: 708 ISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMP 767
Query: 562 IELDAVVWGALLSACWFWM-NMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKM 620
E D V+W LL C N+EV E A + LD + SAY +LSN+YA G W K
Sbjct: 768 FEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVS 827
Query: 621 DIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
D+R+ + ++KK+PGCSW+EL +H F V D+ +P IY L
Sbjct: 828 DLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 166 bits (419), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 132/531 (24%), Positives = 245/531 (46%), Gaps = 26/531 (4%)
Query: 47 RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
R+VVS+N L + + +++ N ++ T FS + CA+ +L GKQ
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVN-SVSTTNFSFVFKECAKQGALELGKQA 70
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
H ++ SG+ FV + LL Y N + A VFD++ + + W+ M+ GY + N M
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
A F MP +DVV W ++SGY ++ + K++++F M G TF +++
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQNGESL-KSIEVFVDMGREGIEFDGR-TFAIILK 188
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
C+ L G +HG++++ G + D AL++ Y + F ++RV+ + +
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANS-IS---YNSMIKGYAVYGQVD-----DSKRL 337
+++I G + + A F + + N+ +S Y S+++ A ++ + L
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 338 FEKMPHRSIISLNT--MISVIPEMER-----------NPVTWNSMISGYVQNNLHEKALQ 384
I+ T M + M+ N ++N+MI+GY Q KAL
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
L+ + + + S +F AC+ + L +G ++ +K+ +V V + +DMY
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 428
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+C ++ +A F + + +W A++ + +G G E + LF ML I P+ TF
Sbjct: 429 KCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGS 488
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEE 555
+L AC G + GM+I S+ G+ ++D+ + G + EAE+
Sbjct: 489 ILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 538
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 362 bits (928), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 207/668 (30%), Positives = 354/668 (52%), Gaps = 56/668 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L++A ++F M R V++NT++ G S+ ++++ L MH ++ + T ++++
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C+ +L G+Q+H K G+ + LL YA C +IE A
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA------------- 443
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
D F++ ++VV+W ++ Y +D + ++FR M+
Sbjct: 444 ------------------LDYFLETEVENVVLWNVMLVAYGL-LDDLRNSFRIFRQMQIE 484
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
E +PN+YT+ S+++ C RLG G+ +H +IK F+ + + LI+ Y D
Sbjct: 485 -EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 543
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----------ANSIS---- 317
A + R + + ++I G + A F ++ + N++S
Sbjct: 544 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 603
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPE----MER----NPVTWNSM 369
++ +G ++ Q S + ++++L + I E E+ + + WN++
Sbjct: 604 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNAL 663
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+SG+ Q+ +E+AL++++ M + ID TF A S +++QG+ +HA + KT +
Sbjct: 664 VSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 723
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+S V +L+ MY++CGSI+DA+ F +S+ N +W A++N YS HG GSEA+ F+
Sbjct: 724 DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQ 783
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSG 548
M+ ++ PN T VGVLSAC GLV++G+ F SM S YG+ P EHY CVVD+L R+G
Sbjct: 784 MIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAG 843
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSN 608
L A+EFI++MPI+ DA+VW LLSAC NME+GE AA + L+ + + YV+LSN
Sbjct: 844 LLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN 903
Query: 609 IYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEH 668
+YAV KW + R+++ VKK+PG SWIE+ + +H+F V D+N+P + I+ +
Sbjct: 904 LYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQD 963
Query: 669 LTANLNSV 676
LT + +
Sbjct: 964 LTKRASEI 971
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 149/568 (26%), Positives = 240/568 (42%), Gaps = 59/568 (10%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A +FD+MP RT+ +WN M+ + E L M NV NE TFS +L
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 92 SVCAQLNSLID-GKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
C + D +QIH +L G V + L+ Y+ ++ A+RVFD L
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR---- 249
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMR 209
KD W +ISG +K + CE +A++LF M
Sbjct: 250 ---------------------------LKDHSSWVAMISGLSK--NECEAEAIRLFCDMY 280
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G MP Y F SV+ AC ++ + G+ +HGL++K GF D + AL+ Y
Sbjct: 281 VLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 339
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGY 325
A ++ + N+LINGL G E A +F R+ E +S + S++
Sbjct: 340 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 326 AVYGQVDDSKRLFEKMPHRSIISLN-----------------TMISVIPEME-RNPVTWN 367
+ G + ++L S N T + E E N V WN
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
M+ Y + + +++ M+ I + T+ + C LG L+ G+ +H+ ++KT
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
F+ N YV + L+DMY++ G ++ A + +V +WT ++ GY+ + +A+ F
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
ML++ I + +SAC + EG +I G L +V L R
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 639
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + E+ + D + W AL+S
Sbjct: 640 GKIEESYLAFEQTEAG-DNIAWNALVSG 666
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 144/587 (24%), Positives = 257/587 (43%), Gaps = 72/587 (12%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
V N I RNG + AR +FD + ++ SW M+ G SK E++ L M+
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 282
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+ FS++LS C ++ SL G+Q+H LVLK G+ +V + L+ Y + + A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+ +F + + + + ++ ++ G QC GY
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQC--------------------------GYG------ 370
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
EKA++LF+ M G P+ T S++ AC+ G G+ +H K GF + I GA
Sbjct: 371 EKAMELFKRMHLDGLE-PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE------ 312
L+ Y C + A+ + E + N + L++ G ++D F +
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVM---LVAYGLLDDLRNSFRIFRQMQIEEI 486
Query: 313 -ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-----SVIPEM------- 359
N +Y S++K G ++ +++ H II N + SV+ +M
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQI-----HSQIIKTNFQLNAYVCSVLIDMYAKLGKL 541
Query: 360 -----------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
++ V+W +MI+GY Q N +KAL + M I + AC
Sbjct: 542 DTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC 601
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ L +L++GQ +HA + F S++ +LV +YSRCG I ++ +F + + AW
Sbjct: 602 AGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWN 661
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
AL++G+ G EA+ +F M + I N TF + A + +G ++ +
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G E ++ + + G + +AE+ ++ + + V W A+++A
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINA 767
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 137/588 (23%), Positives = 237/588 (40%), Gaps = 113/588 (19%)
Query: 43 QMPIRTVVSWNTMLCGYSKWAKF---------DESLS--LVSTMHRSNVKLNETTFSTIL 91
++ RTV LCG ++ A F DES + ++ ++ N T +L
Sbjct: 36 KLKTRTVFP---TLCG-TRRASFAAISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLL 91
Query: 92 SVCAQLN-SLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
C + N SL +G+++H +LK G + + L FY ++ A +VFDE+ E
Sbjct: 92 EGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTI 151
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
W+ M+ NL+ + F +F++M ++V
Sbjct: 152 FTWNKMIKELASRNLIGEVFGLFVRMVSENVT---------------------------- 183
Query: 211 SGENMPNEYTFDSVIRACARLG--AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
PNE TF V+ AC R G AF + +H ++ G + LI+ Y
Sbjct: 184 -----PNEGTFSGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGF 237
Query: 269 FDGAMRVYDRL----------------ENPCLNASNSLINGLISMG-------------- 298
D A RV+D L +N C + L + +G
Sbjct: 238 VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 297
Query: 299 --RIEDAE-------LIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
+IE E L+ +++ N+++ Y G + ++ +F M
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS------- 350
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
+R+ VT+N++I+G Q EKA++L+ M ++ +T + L ACS
Sbjct: 351 ----------QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
G+L +GQ LHA+ K F SN + +L+++Y++C I A F NV W
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
++ Y + +F M ++IVPN T+ +L C+R G + G +I +
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 530 VVPTLEHYTC--VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
L Y C ++D+ + G L A + + + D V W +++
Sbjct: 521 F--QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 565
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 83/160 (51%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N +T R G++ + F+Q ++WN ++ G+ + +E+L + M+R +
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
N TF + + ++ ++ GKQ+H ++ K+GY+ V + L+ YA C I +A++
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
F E+ NE+ W+ ++ Y + S+A D F +M +V
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNV 789
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 33/190 (17%)
Query: 2 KLYATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
+++A ++T ET + N I+ + G + A F ++ + VSWN ++ YSK
Sbjct: 713 QVHAVITKTGYDSETEVC--NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
E+L M SNV+ N T +LS C+ H ++ G FE +
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS-----------HIGLVDKGIAYFESM 819
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKD 180
S Y + E V D L + L+S A + +MP K D
Sbjct: 820 NSE----YGLSPKPEHYVCVVDML---------------TRAGLLSRAKEFIQEMPIKPD 860
Query: 181 VVVWTKLISG 190
+VW L+S
Sbjct: 861 ALVWRTLLSA 870
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 358 bits (919), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 212/713 (29%), Positives = 352/713 (49%), Gaps = 121/713 (16%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VSTN I+ + G + +AR+LFD MP RTVV+W ++ Y++ + FDE+ L M RS
Sbjct: 80 VSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRS 139
Query: 79 N--VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ + TF+T+L C Q+H +K G++ F+
Sbjct: 140 SSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFL--------------- 184
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
+ +++L Y + + A +F ++P+KD V + LI+GY K D
Sbjct: 185 --------------TVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK--D 228
Query: 197 GC-EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
G +++ LF MR+SG + P+++TF V++A L F G+ +H L + GF D S+
Sbjct: 229 GLYTESIHLFLKMRQSG-HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS 315
G +++FY + R+ + ++F+ + E +
Sbjct: 288 GNQILDFYSKHD-------------------------------RVLETRMLFDEMPELDF 316
Query: 316 ISYNSMIKGYAVYGQVDDSKRLFEKMP----HRSIISLNTMISVIPEM------------ 359
+SYN +I Y+ Q + S F +M R TM+S+ +
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 360 -------------------------------------ERNPVTWNSMISGYVQNNLHEKA 382
+R V+W ++ISGYVQ LH
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
L+L+ MR + +STF+ + A + SL G+ LHA ++++ NV+ G+ LVDM
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
Y++CGSI DA F + N +W AL++ ++ +G G A+ F M+E + P++ +
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
+GVL+AC G V +G + F++M YG+ P +HY C++DLLGR+G EAE+ + +MP
Sbjct: 557 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 616
Query: 562 IELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK-KPISAYVILSNIYAVLGKWGKKM 620
E D ++W ++L+AC N + ERAA+K+F ++K + +AYV +SNIYA G+W K
Sbjct: 617 FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 676
Query: 621 DIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
D++K + +KK P SW+E+N ++H FS D+ +PN + I + LTA +
Sbjct: 677 DVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEI 729
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 33/227 (14%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS 70
L T ++++ N + + A +F +P RT VSW ++ GY + L
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 438
Query: 71 LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
L + M SN++ +++TF+T+L A SL+ GKQ+H +++SG F GSGL+ YA
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
C I++A +VF+E MP ++ V W LIS
Sbjct: 499 KCGSIKDAVQVFEE-------------------------------MPDRNAVSWNALISA 527
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
+A + DG E A+ F M ESG P+ + V+ AC+ G +G
Sbjct: 528 HADNGDG-EAAIGAFAKMIESGLQ-PDSVSILGVLTACSHCGFVEQG 572
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 353 bits (905), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 223/675 (33%), Positives = 351/675 (52%), Gaps = 64/675 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
++G + AR +FD +P ++ V+W TM+ G K + SL L + NV + ST
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILST 254
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS C+ L L GKQIH +L+ G E +
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEM-------------------------------D 283
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
L ++++ YV+C + A +F MP K+++ WT L+SGY ++ E A++LF M
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE-AMELFTSMS 342
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+ G P+ Y S++ +CA L A G VH IK D + +LI+ Y C+
Sbjct: 343 KFGLK-PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMG---RIEDAELIFN----RLTEANSISYNSMI 322
A +V+D + N++I G +G + +A IF RL + +++ S++
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 323 KGYAVYGQVDDSKR----LFEKMPHRSIISLNTMISV-------------IPEME-RNPV 364
+ A + SK+ +F+ + I + + +I V EM+ ++ V
Sbjct: 462 RASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLV 521
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACSCLGSLQQGQLLH 421
WNSM +GYVQ + +E+AL L++ +L + R R TF+ + A L S+Q GQ H
Sbjct: 522 IWNSMFAGYVQQSENEEALNLFL---ELQLSRERPDEFTFANMVTAAGNLASVQLGQEFH 578
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
L+K E N Y+ +L+DMY++CGS DA +F S +S +V W ++++ Y++HG G
Sbjct: 579 CQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGK 638
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVV 541
+A+ + E M+ + I PN TFVGVLSAC AGLV +G+K F M +G+ P EHY C+V
Sbjct: 639 KALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMV 698
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
LLGR+G L++A E I+ MP + A+VW +LLS C N+E+ E AA+ D K
Sbjct: 699 SLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSG 758
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNV 661
++ +LSNIYA G W + +R+R+ V K+PG SWI +N VH F +D+++ N
Sbjct: 759 SFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQ 818
Query: 662 IYATLEHLTANLNSV 676
IY L+ L + V
Sbjct: 819 IYEVLDDLLVQIRGV 833
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/565 (23%), Positives = 235/565 (41%), Gaps = 127/565 (22%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
+N I R G +V AR +F++MP R +VSW+TM+ + ++ESL + R+
Sbjct: 82 SNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRK 141
Query: 81 -KLNETTFSTILSVCAQLNSLIDGK------QIHCLVLKSGYECFEFVGSGLLFFYANCF 133
NE S+ + C+ L DG+ Q+ ++KSG++ +VG+ L+ FY
Sbjct: 142 DSPNEYILSSFIQACSGL----DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDG 197
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
I+ A+ VFD L E + + W+ M+ G V+ + +F ++ + +VV
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV----------- 246
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
P+ Y +V+ AC+ L GK +H +++ G E D
Sbjct: 247 ----------------------PDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA 313
S+ LI+ Y C GR+ A +FN +
Sbjct: 285 SLMNVLIDSYVKC-------------------------------GRVIAAHKLFNGMPNK 313
Query: 314 NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY 373
N IS+ +++ GY
Sbjct: 314 NIISWTTLLSGYK----------------------------------------------- 326
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
QN LH++A++L+ +M K + S + +C+ L +L G +HA+ +K ++
Sbjct: 327 -QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDS 385
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG---SEAVLLFEIM 490
YV SL+DMY++C + DA+ F ++ +V + A++ GYS G EA+ +F M
Sbjct: 386 YVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM 445
Query: 491 LEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL 550
+ I P+ TFV +L A + +I M YG+ + + ++D+ L
Sbjct: 446 RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCL 505
Query: 551 HEAEEFIKDMPIELDAVVWGALLSA 575
++ +M ++ D V+W ++ +
Sbjct: 506 KDSRLVFDEMKVK-DLVIWNSMFAG 529
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 210/492 (42%), Gaps = 87/492 (17%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA---KFDESLSLVSTMHR 77
TN I + L AR +FD VV +N M+ GYS+ + E+L++ M
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
++ + TF ++L A L SL KQIH L+ K G F GS L+ Y+NC+ +++
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
++ VFDE+ + ++W+ M GYVQ + +A ++F++
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE---------------------- 545
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
L+L R P+E+TF +++ A L + G+ H L+K G E + I
Sbjct: 546 ----LQLSR-------ERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
AL++ Y C G EDA F+ + +
Sbjct: 595 ALLDMYAKC-------------------------------GSPEDAHKAFDSAASRDVVC 623
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+NS+I YA +G+ + ++ EKM I E N +T+ ++S
Sbjct: 624 WNSVISSYANHGEGKKALQMLEKMMSEGI-------------EPNYITFVGVLSACSHAG 670
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
L E L+ + M + I+ + + G L + + L + K P + V
Sbjct: 671 LVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKAREL---IEKMPTKPAAIVWR 727
Query: 438 SLVDMYSRCGSINDAQ--ASFSSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD 494
SL+ ++ G++ A+ A + +S P + ++T L N Y+ G+ +EA + E M +
Sbjct: 728 SLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEG 787
Query: 495 IVPNAA-TFVGV 505
+V +++G+
Sbjct: 788 VVKEPGRSWIGI 799
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 21/267 (7%)
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
E ++ N +I Y+ G + ++++FEKMP ERN V+W++M+S
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMP-----------------ERNLVSWSTMVS 118
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRS-TFSVLFHACSCLGSLQQGQL--LHAHLVKTP 428
+ ++E++L +++ + D S ACS L + + L + LVK+
Sbjct: 119 ACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSG 178
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
F+ +VYVGT L+D Y + G+I+ A+ F ++ + WT +++G G ++ LF
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFY 238
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548
++E ++VP+ VLSAC + G +I + YG+ ++D + G
Sbjct: 239 QLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSA 575
+ A + MP + + + W LLS
Sbjct: 299 RVIAAHKLFNGMPNK-NIISWTTLLSG 324
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 161/381 (42%), Gaps = 68/381 (17%)
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
VVHG +I G E D + LI Y A +V++++ L + +++++ G
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 299 RIEDAELIF-----NRLTEANSISYNSMIKG----------------------------- 324
E++ ++F R N +S I+
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 325 --------YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
Y G +D ++ +F+ +P E++ VTW +MISG V+
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALP-----------------EKSTVTWTTMISGCVKM 227
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
+LQL+ + + + S + ACS L L+ G+ +HAH+++ E + +
Sbjct: 228 GRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM 287
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
L+D Y +CG + A F+ + + N+ +WT L++GY + L EA+ LF M + +
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHE 552
P+ +L++C + G ++ +Y + L + + V +D+ + L +
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQV----HAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 553 AEEFIKDMPIELDAVVWGALL 573
A + + D+ D V++ A++
Sbjct: 404 ARK-VFDIFAAADVVLFNAMI 423
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
R R F+ L + L ++H ++ E + Y+ L+++YSR G + A+
Sbjct: 42 RGRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKV 101
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACVRAGL 514
F + N+ +W+ +++ +HHG+ E++++F E + PN + AC +GL
Sbjct: 102 FEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGL 159
Query: 515 VNEGMKIFRSMKSYGVVPTLEH----YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
G + ++S+ V + T ++D + G++ A +P E V W
Sbjct: 160 DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWT 218
Query: 571 ALLSAC 576
++S C
Sbjct: 219 TMISGC 224
>sp|Q9SJK9|PP189_ARATH Pentatricopeptide repeat-containing protein At2g36980,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E73 PE=2
SV=1
Length = 625
Score = 352 bits (902), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 208/671 (30%), Positives = 346/671 (51%), Gaps = 73/671 (10%)
Query: 16 TLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM 75
+++V I ++G++ +AR +FD MP V+WNTML YS+ E+++L + +
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
S+ K ++ +F+ ILS CA L ++ G++I LV++SG+ V + L+ Y C +
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 136 EEAKRVFDELHED--NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
A +VF ++ D NE+ W +L Y+ A DVF++MPK+ W +ISG+A
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRAC-ARLGAFCEGKVVHGLLIKCGFEFD 252
E L LF+ M ES E P+ YTF S++ AC A G++VH +++K G+
Sbjct: 182 -CGKLESCLSLFKEMLES-EFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSA 239
Query: 253 ESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE 312
+++ FY + D AMR + +E LT+
Sbjct: 240 VEAKNSVLSFYTKLGSRDDAMRELESIE----------------------------VLTQ 271
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISG 372
+S+NS+I G+ + + +F P E+N VTW +MI+G
Sbjct: 272 ---VSWNSIIDACMKIGETEKALEVFHLAP-----------------EKNIVTWTTMITG 311
Query: 373 YVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
Y +N E+AL+ ++ M K +D + + HACS L L G+++H L+ F+
Sbjct: 312 YGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGY 371
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
YVG +LV++Y++CG I +A +F I++ ++ +W ++ + HGL +A+ L++ M+
Sbjct: 372 AYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIA 431
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
I P+ TF+G+L+ C +GLV EG IF SM K Y + ++H TC++D+ GR GHL
Sbjct: 432 SGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLA 491
Query: 552 EAEEFIKDMPIELDAVV--------WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603
EA KD+ ++V W LL AC + E+G ++ + + ++
Sbjct: 492 EA----KDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSF 547
Query: 604 VILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIY 663
V+LSN+Y G+W + D+R+ + +KK PGCSWIE+ ++V F V D ++P
Sbjct: 548 VLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPR----- 602
Query: 664 ATLEHLTANLN 674
LE L+ LN
Sbjct: 603 --LEELSETLN 611
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 212/671 (31%), Positives = 343/671 (51%), Gaps = 53/671 (7%)
Query: 4 YATQSQTLMTQETL--IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK 61
YA ++ L + L S N ++ + G + + FDQ+P R VSW TM+ GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFV 121
++ +++ ++ M + ++ + T + +L+ A + GK++H ++K G V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 122 GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
+ LL YA C + AK VFD + + W+ M+ ++Q M A F +M ++D+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 182 VVWTKLISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVV 240
V W +ISG+ + G + +AL +F M P+ +T SV+ ACA L C GK +
Sbjct: 244 VTWNSMISGFNQR--GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRI 300
H ++ GF+ + ALI Y C + A R+ ++ L +I
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL--------------KI 347
Query: 301 EDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
E + +++ GY G ++ +K +F +SL +
Sbjct: 348 E---------------GFTALLDGYIKLGDMNQAKNIF--------VSLK---------D 375
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
R+ V W +MI GY Q+ + +A+ L+ +M T + + S L SL G+ +
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHGL 479
H VK+ +V V +L+ MY++ G+I A +F I + +WT+++ + HG
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG-VVPTLEHYT 538
EA+ LFE ML + + P+ T+VGV SAC AGLVN+G + F MK ++PTL HY
Sbjct: 496 AEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYA 555
Query: 539 CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKK 598
C+VDL GR+G L EA+EFI+ MPIE D V WG+LLSAC N+++G+ AA+++ L+ +
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPE 615
Query: 599 PISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPN 658
AY L+N+Y+ GKW + IRK + VKK+ G SWIE+ +VH F VED +P
Sbjct: 616 NSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPE 675
Query: 659 CNVIYATLEHL 669
N IY T++ +
Sbjct: 676 KNEIYMTMKKI 686
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/531 (23%), Positives = 229/531 (43%), Gaps = 90/531 (16%)
Query: 86 TFSTILSVCAQL--------NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ ST+L +C L N + +HC V+KSG ++ + L+ Y+
Sbjct: 8 SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALH 67
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+++FDE+ W+ +L Y + M + F ++P++D V WT +I GY K++
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGY-KNIGQ 126
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
KA+++ M + G P ++T +V+ + A GK VH ++K G + S+
Sbjct: 127 YHKAIRVMGDMVKEGIE-PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSN 185
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
+L+ Y C A V+DR+ +++ N++I + +G+++ A F ++ E + ++
Sbjct: 186 SLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVT 245
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN 377
+NSMI G+ G + +F KM S++S P+
Sbjct: 246 WNSMISGFNQRGYDLRALDIFSKMLRDSLLS--------PD------------------- 278
Query: 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437
R T + + AC+ L L G+ +H+H+V T F+ + V
Sbjct: 279 --------------------RFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLN 318
Query: 438 SLVDMYSRCGSI---------------------------------NDAQASFSSISSPNV 464
+L+ MYSRCG + N A+ F S+ +V
Sbjct: 319 ALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDV 378
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
AWTA++ GY HG EA+ LF M+ PN+ T +LS ++ G +I S
Sbjct: 379 VAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGS 438
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G + ++ ++ + ++G++ A + E D V W +++ A
Sbjct: 439 AVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIA 489
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 224/706 (31%), Positives = 362/706 (51%), Gaps = 78/706 (11%)
Query: 5 ATQSQTLMTQ--------ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTML 56
ATQ+Q +Q ++ I N AI+ R G+ A +F +MP + VS+N M+
Sbjct: 43 ATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMI 102
Query: 57 CGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYE 116
GY + +F+ + L M ++ N +I G + L E
Sbjct: 103 SGYLRNGEFELARKLFDEMPERDL--------------VSWNVMIKG-YVRNRNLGKARE 147
Query: 117 CFEFVG-------SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDA 169
FE + + +L YA +++A+ VFD + E N++ W+ +L YVQ + M +A
Sbjct: 148 LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEA 207
Query: 170 FDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+F +V W L+ G+ K E A + F M N+ + +++++I A
Sbjct: 208 CMLFKSRENWALVSWNCLLGGFVKKKKIVE-ARQFFDSM-----NVRDVVSWNTIITGYA 261
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDES------IGGALIEFYCGCEAFDGAMRVYDRLENPC 283
+ G E + + FDES A++ Y + A ++D++
Sbjct: 262 QSGKIDEARQL----------FDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN 311
Query: 284 LNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPH 343
+ N+++ G + R+E A+ +F+ + N ++N+MI GYA G++ ++K LF+KMP
Sbjct: 312 EVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP- 370
Query: 344 RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV 403
+R+PV+W +MI+GY Q+ +AL+L++ M + RS+FS
Sbjct: 371 ----------------KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN 463
C+ + +L+ G+ LH LVK +E+ +VG +L+ MY +CGSI +A F ++ +
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFR 523
+ +W ++ GYS HG G A+ FE M + + P+ AT V VLSAC GLV++G + F
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFY 534
Query: 524 SM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNM 582
+M + YGV+P +HY C+VDLLGR+G L +A +K+MP E DA +WG LL A N
Sbjct: 535 TMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNT 594
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
E+ E AA K+F ++ + YV+LSN+YA G+WG +R R+ VKK PG SWIE+
Sbjct: 595 ELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEI 654
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHLTANLN--------SVVLFD 680
++ H FSV D +P + I+A LE L + SVVL D
Sbjct: 655 QNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 700
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 339 bits (870), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 209/674 (31%), Positives = 348/674 (51%), Gaps = 62/674 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-HRSNVKLNETTFS 88
R G LV A +F +M R + SWN ++ GY+K FDE++ L M VK + TF
Sbjct: 141 RFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFP 200
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+L C + L GK++H V++ GYE V + L+ Y C +++ A+ +FD
Sbjct: 201 CVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD----- 255
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+MP++D++ W +ISGY ++ C + L+LF M
Sbjct: 256 --------------------------RMPRRDIISWNAMISGYFEN-GMCHEGLELFFAM 288
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
R + P+ T SVI AC LG G+ +H +I GF D S+ +L + Y +
Sbjct: 289 RGLSVD-PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGS 347
Query: 269 FDGAMRVYDRLENPCLNASNSLING----LISMGRIEDAELIFNRLTEANSISYNSMIKG 324
+ A +++ R+E + + ++I+G + I+ ++ + + I+ +++
Sbjct: 348 WREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSA 407
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISL----NTMISV----------------IPEMERNPV 364
A G +D L + +IS N +I++ IP +N +
Sbjct: 408 CATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR--KNVI 465
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+W S+I+G NN +AL +++ K+ + T + AC+ +G+L G+ +HAH+
Sbjct: 466 SWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHV 524
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
++T + ++ +L+DMY RCG +N A + F+S +V +W L+ GYS G GS V
Sbjct: 525 LRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVV 583
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
LF+ M++ + P+ TF+ +L C ++ +V +G+ F M+ YGV P L+HY CVVDLL
Sbjct: 584 ELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLL 643
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G L EA +FI+ MP+ D VWGALL+AC +++GE +AQ +F LDKK + Y+
Sbjct: 644 GRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYI 703
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+L N+YA GKW + +R+ + + D GCSW+E+ +VHAF +D+ +P I
Sbjct: 704 LLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINT 763
Query: 665 TLEHLTANLNSVVL 678
LE ++ V L
Sbjct: 764 VLEGFYEKMSEVGL 777
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 137/552 (24%), Positives = 232/552 (42%), Gaps = 91/552 (16%)
Query: 63 AKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
K +E++ L+++M V ++E F ++ +C + +G +++ + L S
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSM-------- 124
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
S L N F L +V+ + DA+ VF KM ++++
Sbjct: 125 SSLGVELGNAF-----------------------LAMFVRFGNLVDAWYVFGKMSERNLF 161
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
W L+ GYAK ++A+ L+ M G P+ YTF V+R C + GK VH
Sbjct: 162 SWNVLVGGYAKQ-GYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHV 220
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR--- 299
+++ G+E D + ALI Y C A ++DR+ + + N++I+G G
Sbjct: 221 HVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHE 280
Query: 300 -----------------------IEDAELIFNRLTEANSISY-------------NSMIK 323
I EL+ +R + +Y NS+ +
Sbjct: 281 GLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQ 340
Query: 324 GYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKAL 383
Y G ++++LF +M + I+S W +MISGY N L +KA+
Sbjct: 341 MYLNAGSWREAEKLFSRMERKDIVS-----------------WTTMISGYEYNFLPDKAI 383
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
Y M + ++ T + + AC+ LG L G LH +K S V V +L++MY
Sbjct: 384 DTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMY 443
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
S+C I+ A F +I NV +WT+++ G + EA L+F ++ + PNA T
Sbjct: 444 SKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA-LIFLRQMKMTLQPNAITLT 502
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
L+AC R G + G +I + GV ++D+ R G ++ A +
Sbjct: 503 AALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ--K 560
Query: 564 LDAVVWGALLSA 575
D W LL+
Sbjct: 561 KDVTSWNILLTG 572
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 127/536 (23%), Positives = 218/536 (40%), Gaps = 65/536 (12%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N IT + G + +AR LFD+MP R ++SWN M+ GY + E L L M +V
Sbjct: 234 VNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSV 293
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
+ T ++++S C L G+ IH V+ +G+ V + L Y N EA++
Sbjct: 294 DPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEK 353
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+F + + + W+ M+ GY + N + D K
Sbjct: 354 LFSRMERKDIVSWTTMISGY-EYNFLPD-------------------------------K 381
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
A+ +R M + P+E T +V+ ACA LG G +H L IK + LI
Sbjct: 382 AIDTYRMMDQDSVK-PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 440
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN------ 314
Y C+ D A+ ++ + + + S+I GL R +A LIF R +
Sbjct: 441 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA-LIFLRQMKMTLQPNAI 499
Query: 315 --------SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIIS-------LNTMISVIPEM 359
+++ G ++ V + + +++ +NT S
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ 559
Query: 360 ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
+++ +WN +++GY + ++L+ M K + TF L CS ++QG +
Sbjct: 560 KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLM 619
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYS-HH 477
+ + N+ +VD+ R G + +A + +P+ A W AL+N HH
Sbjct: 620 YFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHH 679
Query: 478 --GLGS-EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
LG A +FE L++ V + + C G E K+ R MK G+
Sbjct: 680 KIDLGELSAQHIFE--LDKKSVGYYILLCNLYADC---GKWREVAKVRRMMKENGL 730
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 2/207 (0%)
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
+ G N E+A++L +M++L + F L C + ++G +++ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
V +G + + M+ R G++ DA F +S N+ +W L+ GY+ G EA+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 490 ML-EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548
ML + P+ TF VL C + G ++ + YG ++ ++ + + G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 549 HLHEAEEFIKDMPIELDAVVWGALLSA 575
+ A MP D + W A++S
Sbjct: 246 DVKSARLLFDRMP-RRDIISWNAMISG 271
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 338 bits (868), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 213/669 (31%), Positives = 341/669 (50%), Gaps = 101/669 (15%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
+ N IT R G++ AR LFD +++ SWN+M+ GY + M R
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGY-----------FANLMPRDA 67
Query: 80 VKL-NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
KL +E I+S N L+ G +K+G EI+EA
Sbjct: 68 RKLFDEMPDRNIIS----WNGLVSG------YMKNG-------------------EIDEA 98
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG- 197
++VFD + E N + W+ ++ GYV + A +F KMP+K+ V WT ++ G+ + DG
Sbjct: 99 RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQ--DGR 156
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+ A KL+ E +P++ D++ R ++HGL
Sbjct: 157 IDDACKLY-------EMIPDK---DNIART----------SMIHGL-------------- 182
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS 317
C D A ++D + + +++ G R++DA IF+ + E +S
Sbjct: 183 ------CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS 236
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNP 363
+ SM+ GY G+++D++ LFE MP + +I+ N MIS + + ERN
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
+W ++I + +N +AL L++ M+K + T T + C+ L SL G+ +HA
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
LV+ F+ +VYV + L+ MY +CG + ++ F S ++ W ++++GY+ HGLG EA
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEA 416
Query: 484 VLLF-EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVV 541
+ +F E+ L PN TFV LSAC AG+V EG+KI+ SM+S +GV P HY C+V
Sbjct: 417 LKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMV 476
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS 601
D+LGR+G +EA E I M +E DA VWG+LL AC ++V E A+K+ ++ +
Sbjct: 477 DMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSG 536
Query: 602 AYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRN-NPNCN 660
Y++LSN+YA G+W ++RK + V+K PGCSW E+ ++VHAF+ N +P
Sbjct: 537 TYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQE 596
Query: 661 VIYATLEHL 669
I L+ L
Sbjct: 597 SILKILDEL 605
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 168/384 (43%), Gaps = 63/384 (16%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I+S N ++ +NG++ AR +FD MP R VVSW ++ GY K D + SL M
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 138
Query: 78 SNVKLNETTF-------STILSVCAQLNSLIDGKQ-------IHCLV----LKSGYECFE 119
N K++ T I C +L +I K IH L + E F+
Sbjct: 139 KN-KVSWTVMLIGFLQDGRIDDAC-KLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFD 196
Query: 120 -------FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
+ ++ Y +++A+++FD + E E+ W+ ML+GYVQ + DA ++
Sbjct: 197 EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL 256
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGEN------------------ 214
F MP K V+ +ISG + + KA ++F M+E +
Sbjct: 257 FEVMPVKPVIACNAMISGLGQKGE-IAKARRVFDSMKERNDASWQTVIKIHERNGFELEA 315
Query: 215 ------------MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
P T S++ CA L + GK VH L++C F+ D + L+
Sbjct: 316 LDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTM 375
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL-----TEANSIS 317
Y C + ++DR + + NS+I+G S G E+A +F + T+ N ++
Sbjct: 376 YIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVT 435
Query: 318 YNSMIKGYAVYGQVDDSKRLFEKM 341
+ + + + G V++ +++E M
Sbjct: 436 FVATLSACSYAGMVEEGLKIYESM 459
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 144/332 (43%), Gaps = 37/332 (11%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+++ N I+ G+ G++ AR +FD M R SW T++ + + E+L L M +
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
V+ T +ILSVCA L SL GKQ+H +++ ++ +V S L+ Y C E+ +
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
+K +FD + ++W+ ++ GY L +A VF +MP
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPL------------------- 425
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIG 256
SG PNE TF + + AC+ G EG K+ + G + +
Sbjct: 426 -------------SGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHY 472
Query: 257 GALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRLTE--- 312
+++ F+ AM + D + P SL+ + +++ AE +L E
Sbjct: 473 ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEP 532
Query: 313 ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
NS +Y + YA G+ D L + M R
Sbjct: 533 ENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 337 bits (865), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 209/684 (30%), Positives = 349/684 (51%), Gaps = 65/684 (9%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPI--RTVVSWNTMLCGYSK 61
YA Q +++ I T C +G + AR +F++ P+ R V +N M+ G+S
Sbjct: 67 YARQLFDEISEPDKIARTTMVSGYCA-SGDITLARGVFEKAPVCMRDTVMYNAMITGFSH 125
Query: 62 WAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQ---IHCLVLKSGYECF 118
+++L M K + TF+++L+ A + D KQ H LKSG
Sbjct: 126 NNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVAD--DEKQCVQFHAAALKSGAGYI 183
Query: 119 EFVGSGLLFFYANCFE----IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI 174
V + L+ Y+ C + A++VFDE+ E +E W+ M+ GYV+ ++
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLE 243
Query: 175 KMPKK-DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA 233
M +V + +ISGY ++AL++ R M SG + +E+T+ SVIRACA G
Sbjct: 244 GMDDNMKLVAYNAMISGYVNR-GFYQEALEMVRRMVSSGIEL-DEFTYPSVIRACATAGL 301
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
GK VH ++ R E+ + NSL++
Sbjct: 302 LQLGKQVHAYVL--------------------------------RREDFSFHFDNSLVSL 329
Query: 294 LISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
G+ ++A IF ++ + +S+N+++ GY G + ++K +F++M
Sbjct: 330 YYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK----------- 378
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
E+N ++W MISG +N E+ L+L+ M++ + FS +C+ LG+
Sbjct: 379 ------EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
GQ HA L+K F+S++ G +L+ MY++CG + +A+ F ++ + +W AL+
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAA 492
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVP 532
HG G+EAV ++E ML++ I P+ T + VL+AC AGLV++G K F SM++ Y + P
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPP 552
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKM 592
+HY ++DLL RSG +AE I+ +P + A +W ALLS C NME+G AA K+
Sbjct: 553 GADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKL 612
Query: 593 FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVE 652
FGL + Y++LSN++A G+W + +RK + VKK+ CSWIE+ ++VH F V+
Sbjct: 613 FGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVD 672
Query: 653 DRNNPNCNVIYATLEHLTANLNSV 676
D ++P +Y L+ L + +
Sbjct: 673 DTSHPEAEAVYIYLQDLGKEMRRL 696
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 187/466 (40%), Gaps = 133/466 (28%)
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
+ VHG +I GF+ I LI+ YC + A +++D + P A ++++G +
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 297 MGRIEDAELIFNR--LTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS--------- 345
G I A +F + + +++ YN+MI G++ + LF KM H
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 346 ------------------------------IISL-NTMISVIPEMERNPV---------- 364
I S+ N ++SV + +P
Sbjct: 153 SVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212
Query: 365 --------TWNSMISGYVQN--------------------------------NLHEKALQ 384
+W +M++GYV+N +++AL+
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALE 272
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYS 444
+ M I+ T+ + AC+ G LQ G+ +HA++++ + + + SLV +Y
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYY 331
Query: 445 RCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+CG ++A+A F + + ++ +W AL++GY G EA L+F+ M E++I+ +++
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL----SWMI 387
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVP-------------------------------- 532
++S G EG+K+F MK G P
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG 447
Query: 533 ---TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+L ++ + + G + EA + + MP LD+V W AL++A
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAA 492
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 33/129 (25%)
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT---- 468
SLQ + +H +++ F+ ++ L+D+Y + +N A+ F IS P+ A T
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 469 -----------------------------ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNA 499
A++ G+SH+ G A+ LF M + P+
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 500 ATFVGVLSA 508
TF VL+
Sbjct: 149 FTFASVLAG 157
>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein At1g53600,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2
SV=2
Length = 717
Score = 337 bits (864), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 219/687 (31%), Positives = 345/687 (50%), Gaps = 51/687 (7%)
Query: 13 TQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSK-------WAKF 65
T T I N I++ RNG L A +F QM R++VSW M+ Y++ W F
Sbjct: 45 TTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVF 104
Query: 66 DESLSLVSTMHRSNV------KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
DE V+T + + + K + + + N++ I V ++ E
Sbjct: 105 DEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAE 164
Query: 120 FV-------------GSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
F+ + LL Y + EA RVF + + S M+ GY + +
Sbjct: 165 FLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRI 224
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
DA +F +M +++V+ WT +I GY K+ E LF MR+ G+ N T + +
Sbjct: 225 VDARSLFDRMTERNVITWTAMIDGYFKA-GFFEDGFGLFLRMRQEGDVKVNSNTLAVMFK 283
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
AC + EG +HGL+ + EFD +G +L+ Y A V+ ++N +
Sbjct: 284 ACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVS 343
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346
NSLI GL+ +I +A +F ++ + +S+ MIKG++ G++ LF MP
Sbjct: 344 WNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMP---- 399
Query: 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
E++ +TW +MIS +V N +E+AL + M + + TFS +
Sbjct: 400 -------------EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLS 446
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAA 466
A + L L +G +H +VK +++ V SLV MY +CG+ NDA FS IS PN+ +
Sbjct: 447 ATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVS 506
Query: 467 WTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526
+ +++GYS++G G +A+ LF ++ PN TF+ +LSACV G V+ G K F+SMK
Sbjct: 507 YNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMK 566
Query: 527 -SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVG 585
SY + P +HY C+VDLLGRSG L +A I MP + + VWG+LLSA + +++
Sbjct: 567 SSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLA 626
Query: 586 ERAAQKMFGLDKKPISAYVILSNIYAVLGK---WGKKMDIRKRLTHLEVKKDPGCSWIEL 642
E AA+K+ L+ + YV+LS +Y+++GK + M+I+K +KKDPG SWI L
Sbjct: 627 ELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKK---SKRIKKDPGSSWIIL 683
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHL 669
VH F D + N I TL+ +
Sbjct: 684 KGEVHNFLAGDESQLNLEEIGFTLKMI 710
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 337 bits (864), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 217/659 (32%), Positives = 344/659 (52%), Gaps = 64/659 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
A NLFD+MP R VS+ T+ GY+ + + L S +HR +LN F++ L +
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVS 158
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L+ +H ++K GY+ FVG+ L+ Y+ C ++ A+ VF+
Sbjct: 159 LDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEG------------ 206
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMP 216
+ C KD+VVW ++S Y ++ E +LKL MR +G MP
Sbjct: 207 ----ILC---------------KDIVVWAGIVSCYVEN-GYFEDSLKLLSCMRMAG-FMP 245
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
N YTFD+ ++A LGAF K VHG ++K + D +G L++ Y A +V+
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVF 305
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAV----- 327
+ + + + +I G +A +F R+ EA N + +S++ G A+
Sbjct: 306 NEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG 365
Query: 328 -----YGQVDDSKRLFEKMPHRSIIS-------LNTMISVIPEME-RNPVTWNSMISGYV 374
+G V + ++I ++T + + E+ +N V+WN++I GY
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY- 424
Query: 375 QNNLHE--KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
NL E KA ++ + + T TFS AC+ L S+ G +H +KT
Sbjct: 425 -ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V V SL+DMY++CG I AQ+ F+ + + +VA+W AL++GYS HGLG +A+ + +IM +
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLH 551
+D PN TF+GVLS C AGL+++G + F SM + +G+ P LEHYTC+V LLGRSG L
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 552 EAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611
+A + I+ +P E ++W A+LSA N E R+A+++ ++ K + YV++SN+YA
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYA 663
Query: 612 VLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
+W IRK + + VKK+PG SWIE VH FSV ++P+ +I LE L
Sbjct: 664 GAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLN 722
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/516 (22%), Positives = 221/516 (42%), Gaps = 60/516 (11%)
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
L+ + +L C Q N I K IHC +LK G C + + +L
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKG-SCLDLFATNIL--------------- 90
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
L YV+ DA ++F +MP+++ V + L GYA C+
Sbjct: 91 ---------------LNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA-----CQDP 130
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+ L+ + G + N + F S ++ L +H ++K G++ + +G ALI
Sbjct: 131 IGLYSRLHREGHEL-NPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALIN 189
Query: 262 FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSIS 317
Y C + D A V++ + + +++ + G ED+ + + + A N+ +
Sbjct: 190 AYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYT 249
Query: 318 YNSMIKG----------YAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------VIPEME 360
+++ +K V+GQ+ + + + ++ L T + V EM
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
Query: 361 RNPVT-WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQL 419
+N V W+ MI+ + QN +A+ L++ MR+ + T S + + C+ G+
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
LH +VK F+ ++YV +L+D+Y++C ++ A F+ +SS N +W ++ GY + G
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC 539
G +A +F L + TF L AC ++ G+++ +
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS 489
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
++D+ + G + A+ +M +D W AL+S
Sbjct: 490 LIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISG 524
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 206/467 (44%), Gaps = 59/467 (12%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + +AR +F+ + + +V W ++ Y + F++SL L+S M + N TF T L
Sbjct: 195 GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL 254
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
L + K +H +LK+ Y VG GLL Y ++ +A +VF+E+ +++ +
Sbjct: 255 KASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVV 314
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS M+ + Q ++A D+FI+M + VV
Sbjct: 315 PWSFMIARFCQNGFCNEAVDLFIRMREAFVV----------------------------- 345
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
PNE+T S++ CA G+ +HGL++K GF+ D + ALI+ Y CE D
Sbjct: 346 ----PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 272 AMRVYDRLENPCLNASNSLINGLISMG---------------RIEDAELIFNRLTEANSI 316
A++++ L + + N++I G ++G ++ E+ F+ A +
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA- 460
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI-------SVIPEMERNPV-TWNS 368
S SM G V+G + + S+I + SV EME V +WN+
Sbjct: 461 SLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNA 520
Query: 369 MISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT- 427
+ISGY + L +AL++ M+ TF + CS G + QGQ +++
Sbjct: 521 LISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDH 580
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG 473
E + T +V + R G ++ A I P+V W A+++
Sbjct: 581 GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 33/221 (14%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I +N I + ++ TA LF ++ + VSWNT++ GY + ++ S+ R
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ V + E TFS+ L CA L S+ G Q+H L +K+ V + L+ YA C +I+
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VF+E M DV W LISGY+ G
Sbjct: 503 AQSVFNE-------------------------------METIDVASWNALISGYSTHGLG 531
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+AL++ M++ + PN TF V+ C+ G +G+
Sbjct: 532 -RQALRILDIMKDR-DCKPNGLTFLGVLSGCSNAGLIDQGQ 570
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 93/206 (45%), Gaps = 12/206 (5%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ +N I + G + A+++F++M V SWN ++ GYS ++L ++ M
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQ-IHCLVLKSGYE-CFEFVGSGLLFFYANCFEI 135
+ K N TF +LS C+ + G++ ++ G E C E + ++ ++
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHY-TCMVRLLGRSGQL 602
Query: 136 EEAKRVFDEL-HEDNELLWSLMLVGYVQCN---LMSDAFDVFIKMPKKDVVVWTKLISGY 191
++A ++ + + +E + ++W ML + N + + +K+ KD + + + Y
Sbjct: 603 DKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMY 662
Query: 192 AKS-----VDGCEKALKLFRWMRESG 212
A + V K++K +E G
Sbjct: 663 AGAKQWANVASIRKSMKEMGVKKEPG 688
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 202/674 (29%), Positives = 354/674 (52%), Gaps = 26/674 (3%)
Query: 9 QTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDES 68
+ L +T +VS + GR L A LFD+MP R ++WN ++ + ++++
Sbjct: 16 RGLDNSDTRVVSASMGFY--GRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKA 73
Query: 69 LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
+ L M S K ++T +L VC+ +G+QIH VL+ G E + + L+
Sbjct: 74 VELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVM 133
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVW 184
Y+ ++E +++VF+ + + N W+ +L Y + + DA + +M K D+V W
Sbjct: 134 YSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTW 193
Query: 185 TKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL 244
L+SGYA S + A+ + + M+ +G P+ + S+++A A G GK +HG +
Sbjct: 194 NSLLSGYA-SKGLSKDAIAVLKRMQIAGLK-PSTSSISSLLQAVAEPGHLKLGKAIHGYI 251
Query: 245 IKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAE 304
++ +D + LI+ Y A V+D ++ + A NSL++GL ++DAE
Sbjct: 252 LRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAE 311
Query: 305 LIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEME 360
+ R+ + ++I++NS+ GYA G+ + + + KM + +
Sbjct: 312 ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP------------ 359
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
N V+W ++ SG +N AL++++ M++ + +T S L CL L G+ +
Sbjct: 360 -NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
H ++ + YV T+LVDMY + G + A F I + ++A+W ++ GY+ G G
Sbjct: 419 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 478
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTC 539
E + F +MLE + P+A TF VLS C +GLV EG K F M+S YG++PT+EH +C
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
+VDLLGRSG+L EA +FI+ M ++ DA +WGA LS+C ++E+ E A +++ L+
Sbjct: 539 MVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHN 598
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNC 659
+ Y+++ N+Y+ L +W IR + + V+ SWI+++ VH F E + +P+
Sbjct: 599 SANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDE 658
Query: 660 NVIYATLEHLTANL 673
IY L L + +
Sbjct: 659 GDIYFELYKLVSEM 672
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 336 bits (861), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 192/640 (30%), Positives = 336/640 (52%), Gaps = 53/640 (8%)
Query: 40 LFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS 99
+ +P T+ S+++++ +K F +S+ + S M + + + VCA+L++
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 100 LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG 159
GKQIHC+ SG + FV + Y C + +A++VFD + + + + S +L
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 160 YVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGEN 214
Y + + + + +M + ++V W ++SG+ +S G K A+ +F+ + G
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRS--GYHKEAVVMFQKIHHLG-F 248
Query: 215 MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMR 274
P++ T SV+ + G+++HG +IK G D+ + A+I+ Y
Sbjct: 249 CPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMY----------- 297
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
+ + G+IS+ FN+ + N+ I G + G VD +
Sbjct: 298 -----------GKSGHVYGIISL---------FNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+FE ++ ME N V+W S+I+G QN +AL+L+ M+ +
Sbjct: 338 LEMFELFKEQT-------------MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
T + AC + +L G+ H V+ NV+VG++L+DMY++CG IN +Q
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F+ + + N+ W +LMNG+S HG E + +FE ++ + P+ +F +LSAC + GL
Sbjct: 445 VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504
Query: 515 VNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+EG K F+ M + YG+ P LEHY+C+V+LLGR+G L EA + IK+MP E D+ VWGALL
Sbjct: 505 TDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
++C N+++ E AA+K+F L+ + YV+LSNIYA G W + IR ++ L +KK
Sbjct: 565 NSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKK 624
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+PGCSWI++ +RV+ D+++P + I ++ ++ +
Sbjct: 625 NPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEM 664
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 160/358 (44%), Gaps = 48/358 (13%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETT 86
CGR G AR +FD+M + VV+ + +LC Y++ +E + ++S M S ++ N +
Sbjct: 163 RCGRMGD---ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVS 219
Query: 87 FSTILS-----------------------------VCAQLNSLID------GKQIHCLVL 111
++ ILS V + L S+ D G+ IH V+
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 112 KSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFD 171
K G + V S ++ Y + +F++ + + + G + L+ A +
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALE 339
Query: 172 VFIKMPKK----DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
+F ++ +VV WT +I+G A++ E AL+LFR M+ +G PN T S++ A
Sbjct: 340 MFELFKEQTMELNVVSWTSIIAGCAQNGKDIE-ALELFREMQVAGVK-PNHVTIPSMLPA 397
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
C + A G+ HG ++ + +G ALI+ Y C + + V++ + L
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 288 NSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
NSL+NG G+ ++ IF L + + IS+ S++ G D+ + F+ M
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 151/349 (43%), Gaps = 57/349 (16%)
Query: 241 HGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGL------ 294
H ++K G + D I LI Y F+ A V + +P + + +SLI L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 295 ----------ISMGRIEDAELIFNRLT-----------------------EANSISYNSM 321
S G I D+ ++ N + ++ SM
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIIS-------------LNTMISVIPEMER-----NP 363
Y G++ D++++F++M + +++ L ++ ++ EME N
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAH 423
V+WN ++SG+ ++ H++A+ ++ + L + T S + + L G+L+H +
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 424 LVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483
++K + V ++++DMY + G + + F+ A + G S +GL +A
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
+ +FE+ EQ + N ++ +++ C + G E +++FR M+ GV P
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 17/227 (7%)
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE 380
+I Y+ Y +D+ + + +P +I S ++S+I + L
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYS-----------------FSSLIYALTKAKLFT 98
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
+++ ++ M + LF C+ L + + G+ +H + + + +V S+
Sbjct: 99 QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMF 158
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
MY RCG + DA+ F +S +V +AL+ Y+ G E V + M I N
Sbjct: 159 HMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIV 218
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS 547
++ G+LS R+G E + +F+ + G P + V+ +G S
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDS 265
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 106/271 (39%), Gaps = 43/271 (15%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G++G + +LF+Q + N + G S+ D++L + ++LN +++
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 89 TILSVCAQ-----------------------------------LNSLIDGKQIHCLVLKS 113
+I++ CAQ + +L G+ H ++
Sbjct: 358 SIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 114 GYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVF 173
VGS L+ YA C I ++ VF+ + N + W+ ++ G+ + +F
Sbjct: 418 HLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 174 IKMP----KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACA 229
+ K D + +T L+S + V ++ K F+ M E P + ++
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQ-VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLG 536
Query: 230 RLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
R G E + L+ + FE D + GAL+
Sbjct: 537 RAGKLQEA---YDLIKEMPFEPDSCVWGALL 564
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 73/195 (37%), Gaps = 46/195 (23%)
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA ++K+ +++ Y+ L+ YS NDA SI P + ++++L+ + L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSAC------------------------------- 509
++++ +F M ++P++ + C
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 510 ----VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDL--LGRSGHLHEAEEFIKDMP-- 561
+R G + + K+F M VV TC L R G L E + +M
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVV------TCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 562 -IELDAVVWGALLSA 575
IE + V W +LS
Sbjct: 212 GIEANIVSWNGILSG 226
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 335 bits (859), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 207/642 (32%), Positives = 333/642 (51%), Gaps = 84/642 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-VKLNETTFSTI 90
G+L +AR +FD+M R VVSW +M+CGY++ +++ L M R V N T +
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
+S CA+L L G++++ + SG E + + S L+ Y C I+ AKR+FDE N
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
L + M YV+ L +AL +F M +
Sbjct: 303 DLCNAMASNYVRQGLT--------------------------------REALGVFNLMMD 330
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
SG P+ + S I +C++L GK HG +++ GFE ++I ALI+ Y C D
Sbjct: 331 SGVR-PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
A R IF+R++ +++NS++ GY G+
Sbjct: 390 TAFR-------------------------------IFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
VD + FE MP E+N V+WN++ISG VQ +L E+A++++ +M+
Sbjct: 419 VDAAWETFETMP-----------------EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 391 -KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
+ ++ T + AC LG+L + ++ ++ K + +V +GT+LVDM+SRCG
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
A + F+S+++ +V+AWTA + + G A+ LF+ M+EQ + P+ FVG L+AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 510 VRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
GLV +G +IF SM K +GV P HY C+VDLLGR+G L EA + I+DMP+E + V+
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W +LL+AC N+E+ AA+K+ L + +YV+LSN+YA G+W +R +
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
++K PG S I++ + H F+ D ++P I A L+ ++
Sbjct: 702 KGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 175/368 (47%), Gaps = 29/368 (7%)
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
++ LI GYA S C +A+ LF M SG + P++YTF + ACA+ A G +HG
Sbjct: 101 MYNSLIRGYASS-GLCNEAILLFLRMMNSGIS-PDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
L++K G+ D + +L+ FY C D A +V+D + + + S+I G +D
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 303 AELIFNRLTEANSISYNSM-----IKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP 357
A +F R+ ++ NS+ I A ++ ++++ + + I + M+S +
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 358 EM------------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399
+M N N+M S YV+ L +AL ++ M + R
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+ +CS L ++ G+ H ++++ FES + +L+DMY +C + A F +
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
S+ V W +++ GY +G A FE M E++IV ++ ++S V+ L E +
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV----SWNTIISGLVQGSLFEEAI 454
Query: 520 KIFRSMKS 527
++F SM+S
Sbjct: 455 EVFCSMQS 462
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
+NS+I GY + L +A+ L++ M I + TF AC+ + G +H +V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV- 484
K + +++V SLV Y+ CG ++ A+ F +S NV +WT+++ GY+ +AV
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
L F ++ ++++ PN+ T V V+SAC + + G K++ +++ G+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 144/340 (42%), Gaps = 70/340 (20%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M+ +T +V+ N + NG++ A F+ MP + +VSWNT++ G + + F+E++ +
Sbjct: 398 MSNKT-VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 72 VSTMH-RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
+M + V + T +I S C L +L K I+ + K+G + +G+ L+ ++
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISG 190
C + E A +F+ L +DV WT I
Sbjct: 517 RCGDPESAMSIFNSL-------------------------------TNRDVSAWTAAIGA 545
Query: 191 YAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFE 250
A + + E+A++LF M E G P+ F + AC+ G +GK + ++K
Sbjct: 546 MAMAGNA-ERAIELFDDMIEQGLK-PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH-- 601
Query: 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA-ELIFNR 309
G + + + GC +++ L G +E+A +LI +
Sbjct: 602 -----GVSPEDVHYGC-----------------------MVDLLGRAGLLEEAVQLIEDM 633
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKM----PHRS 345
E N + +NS++ V G V+ + EK+ P R+
Sbjct: 634 PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERT 673
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 206/673 (30%), Positives = 355/673 (52%), Gaps = 58/673 (8%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N ++ G+ G L AR +FD MP R +VS+ +++ GYS+ + E++ L M + ++
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV 165
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
++ F +I+ CA + + GKQ+H V+K +E + +
Sbjct: 166 PDQFAFGSIIKACASSSDVGLGKQLHAQVIK----------------------LESSSHL 203
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-K 200
+ + ++ YV+ N MSDA VF +P KD++ W+ +I+G+++ G E +
Sbjct: 204 IAQ---------NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL--GFEFE 252
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL + M G PNEY F S ++AC+ L G +HGL IK + G +L
Sbjct: 253 ALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLC 312
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSI 316
+ Y C + A RV+D++E P + N +I GL + G ++A +F+++ + ++I
Sbjct: 313 DMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAI 372
Query: 317 SYNSMI----------KGYAVYGQVDDSKRLFEKMPHRSIISLNTMIS-------VIPEM 359
S S++ +G ++ + L + S++++ T S + +
Sbjct: 373 SLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDF 432
Query: 360 ERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
N V+WN++++ +Q+ + L+L+ M + T L C + SL+ G
Sbjct: 433 RNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLG 492
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
+H + +KT ++ L+DMY++CGS+ A+ F S+ + +V +W+ L+ GY+
Sbjct: 493 SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQS 552
Query: 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEH 536
G G EA++LF+ M I PN TFVGVL+AC GLV EG+K++ +M++ +G+ PT EH
Sbjct: 553 GFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEH 612
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLD 596
+CVVDLL R+G L+EAE FI +M +E D VVW LLSAC N+ + ++AA+ + +D
Sbjct: 613 CSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKID 672
Query: 597 KKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNN 656
+A+V+L +++A G W +R + +VKK PG SWIE+ ++H F ED +
Sbjct: 673 PFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFH 732
Query: 657 PNCNVIYATLEHL 669
P + IY L ++
Sbjct: 733 PERDDIYTVLHNI 745
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 212/507 (41%), Gaps = 99/507 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+++ N I R Q+ A +F +P++ ++SW++++ G+S+ E+LS + M
Sbjct: 203 LIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLS 262
Query: 78 SNV-KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
V NE F + L C+ L G QIH L +KS G L YA C +
Sbjct: 263 FGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLN 322
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A+RVFD++ + W++++ G +GYA
Sbjct: 323 SARRVFDQIERPDTASWNVIIAGLAN--------------------------NGYA---- 352
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
++A+ +F MR SG +P+ + S++ A + A +G +H +IK GF D ++
Sbjct: 353 --DEAVSVFSQMRSSG-FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVC 409
Query: 257 GALIEFYCGCEAFDGAMRVYDRLENPCLNAS-NSLINGL--------------------- 294
+L+ Y C +++ N + S N+++
Sbjct: 410 NSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSEC 469
Query: 295 ----ISMGR-----IEDAELIFNRLTEANSISY---------NSMIKGYAVYGQVDDSKR 336
I+MG +E + L S+ N +I YA G + ++R
Sbjct: 470 EPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARR 529
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F+ M +R ++S W+++I GY Q+ E+AL L+ M+ I+
Sbjct: 530 IFDSMDNRDVVS-----------------WSTLIVGYAQSGFGEEALILFKEMKSAGIEP 572
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVK----TPFESNVYVGTSLVDMYSRCGSINDA 452
TF + ACS +G +++G L+A + +P + + + +VD+ +R G +N+A
Sbjct: 573 NHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC---SCVVDLLARAGRLNEA 629
Query: 453 QASFSSIS-SPNVAAWTALMNGYSHHG 478
+ + P+V W L++ G
Sbjct: 630 ERFIDEMKLEPDVVVWKTLLSACKTQG 656
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/521 (22%), Positives = 214/521 (41%), Gaps = 60/521 (11%)
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S+ K+ T+ +++ C+ SL G++IH +L S + + + +L Y C + +
Sbjct: 61 SSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD 120
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A+ VFD + E N + ++ ++ GY Q ++A +++KM ++D+V
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV--------------- 165
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
P+++ F S+I+ACA GK +H +IK
Sbjct: 166 ------------------PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQN 207
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING----------------LISMGRIE 301
ALI Y A RV+ + L + +S+I G ++S G
Sbjct: 208 ALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFH 267
Query: 302 DAELIFNRLTEANS----ISYNSMIKGYAVYGQVDDSKRL---FEKMPHRSIISLNTMIS 354
E IF +A S Y S I G + ++ + M R LN+
Sbjct: 268 PNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGF-LNSARR 326
Query: 355 VIPEMER-NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
V ++ER + +WN +I+G N ++A+ ++ MR + L A + +
Sbjct: 327 VFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMA 386
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI-SSPNVAAWTALMN 472
L QG +H++++K F +++ V SL+ MY+ C + F ++ + +W ++
Sbjct: 387 LSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILT 446
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
H E + LF++ML + P+ T +L CV + G ++ G+ P
Sbjct: 447 ACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAP 506
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
++D+ + G L +A M D V W L+
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLI 546
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 120/231 (51%), Gaps = 6/231 (2%)
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR-STFSVL 404
I++ ++++S I E N I+ ++N + +AL+ + +K + + R T+ L
Sbjct: 18 ILATSSVVSTIKTEE----LMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISL 73
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
ACS SL QG+ +H H++ + + + + ++ MY +CGS+ DA+ F + N+
Sbjct: 74 ICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNL 133
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
++T+++ GYS +G G+EA+ L+ ML++D+VP+ F ++ AC + V G ++
Sbjct: 134 VSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQ 193
Query: 525 MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ L ++ + R + +A +P++ D + W ++++
Sbjct: 194 VIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK-DLISWSSIIAG 243
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 197/666 (29%), Positives = 335/666 (50%), Gaps = 57/666 (8%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L A +FD++ I + WN ++ +K F S+ L M S V+++ TFS +
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ L S+ G+Q+H +LKSG+ VG+ L+ FY ++ A++VFDE+ E + +
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ ++ GYV L VF++M L+SG +
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQM----------LVSGIEIDL---------------- 296
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
T SV CA G+ VH + +K F ++ L++ Y C D
Sbjct: 297 -------ATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE----ANSISYNSMIKGYAV 327
A V+ + + + + S+I G G +A +F + E + + +++ A
Sbjct: 350 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 409
Query: 328 YGQVDDSKRLFEKMPHR----SIISLNTMIS-------------VIPEME-RNPVTWNSM 369
Y +D+ KR+ E + I N ++ V EM ++ ++WN++
Sbjct: 410 YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTI 469
Query: 370 ISGYVQNNLHEKALQLY-MTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428
I GY +N +AL L+ + + + T + + AC+ L + +G+ +H ++++
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFE 488
+ S+ +V SLVDMY++CG++ A F I+S ++ +WT ++ GY HG G EA+ LF
Sbjct: 530 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 489 IMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRS 547
M + I + +FV +L AC +GLV+EG + F M+ + PT+EHY C+VD+L R+
Sbjct: 590 QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLART 649
Query: 548 GHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILS 607
G L +A FI++MPI DA +WGALL C ++++ E+ A+K+F L+ + YV+++
Sbjct: 650 GDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMA 709
Query: 608 NIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLE 667
NIYA KW + +RKR+ ++K+PGCSWIE+ RV+ F D +NP I A L
Sbjct: 710 NIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLR 769
Query: 668 HLTANL 673
+ A +
Sbjct: 770 KVRARM 775
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/569 (24%), Positives = 256/569 (44%), Gaps = 93/569 (16%)
Query: 47 RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQI 106
R+V NT L + + + ++ L+ + ++ + T ++L +CA SL DGK++
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEV 116
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
+ +G+ +GS L Y NC +++EA RVFDE
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE---------------------- 154
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
+K+ K + W L++ AKS D ++ LF+ M SG M + YTF V +
Sbjct: 155 -------VKIEK--ALFWNILMNELAKSGD-FSGSIGLFKKMMSSGVEM-DSYTFSCVSK 203
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
+ + L + G+ +HG ++K GF S+G +L+ FY + D A +V+D + + +
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 287 SNSLINGLISMGRIEDAELIFNRL-------------------TEANSISY--------- 318
NS+ING +S G E +F ++ ++ IS
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 319 -----------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
N+++ Y+ G +D +K +F +M RS++S +
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS-----------------YT 366
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
SMI+GY + L +A++L+ M + I T + + + C+ L +G+ +H + +
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN 426
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
+++V +L+DMY++CGS+ +A+ FS + ++ +W ++ GYS + +EA+ LF
Sbjct: 427 DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF 486
Query: 488 EIMLEQD-IVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR 546
++LE+ P+ T VL AC ++G +I + G +VD+ +
Sbjct: 487 NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 546
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSA 575
G L A D+ + D V W +++
Sbjct: 547 CGALLLAHMLFDDIASK-DLVSWTVMIAG 574
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 206/473 (43%), Gaps = 58/473 (12%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
+N ++ +AR +FD+M R V+SWN+++ GY ++ LS+ M S ++++ T +
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+ + CA + G+ +H + +K+ + + + LL Y+ C +++ AK VF E+ + +
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ ++ M+ GY + L + A+KLF M
Sbjct: 362 VVSYTSMIAGYAREGLAGE--------------------------------AVKLFEEME 389
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
E G + P+ YT +V+ CAR EGK VH + + FD + AL++ Y C +
Sbjct: 390 EEGIS-PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSI------------- 316
A V+ + + + N++I G +A +FN L E
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 317 --SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVI--------PEMERNPVTW 366
S ++ KG ++G + + ++ S++ + + ++ V+W
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG-QLLHAHLV 425
MI+GY + ++A+ L+ MR+ I+ +F L +ACS G + +G + +
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHH 477
+ E V +VDM +R G + A ++ P+ W AL+ G H
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 16/256 (6%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS-TMH 76
I +N + + G + A +F +M ++ ++SWNT++ GYSK +E+LSL + +
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+E T + +L CA L++ G++IH ++++GY V + L+ YA C +
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 551
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPK----KDVVVWTKLISGYA 192
A +FD++ + + W++M+ GY +A +F +M + D + + L+ YA
Sbjct: 552 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL--YA 609
Query: 193 KSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFE 250
S G ++ + F MR + P + ++ AR G + + + + I
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP--- 666
Query: 251 FDESIGGALIEFYCGC 266
D +I GAL+ CGC
Sbjct: 667 -DATIWGALL---CGC 678
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
S+ +++ + I +R+ N+ + + ++ E A++L K ID R+ SVL
Sbjct: 43 SLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDID-PRTLCSVL 101
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
C+ SL+ G+ + + F + +G+ L MY+ CG + +A F +
Sbjct: 102 -QLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKA 160
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
W LMN + G S ++ LF+ M+ + ++ TF
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 325 bits (833), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 214/690 (31%), Positives = 343/690 (49%), Gaps = 71/690 (10%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
I +N+ + + G L A LFD+MP R VSWNTM+ GY+ K +++ L + M R
Sbjct: 35 IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKR 94
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S ++ +FS +L A + G+Q+H LV+K GYEC +VGS L+ YA C +E
Sbjct: 95 SGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE- 153
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
DAF+ F ++ + + V W LI+G+ + D
Sbjct: 154 ------------------------------DAFEAFKEISEPNSVSWNALIAGFVQVRD- 182
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-KVVHGLLIKCGFEFDESIG 256
+ A L M + TF ++ FC K VH ++K G + + +I
Sbjct: 183 IKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDD-PMFCNLLKQVHAKVLKLGLQHEITIC 241
Query: 257 GALIEFYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRL----T 311
A+I Y C + A RV+D L + L + NS+I G E A +F ++
Sbjct: 242 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 301
Query: 312 EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII---------SLNTMISVIPEM--- 359
E + +Y ++ + + ++F K H +I + N +IS+ +
Sbjct: 302 ETDIYTYTGLLSACS-----GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTG 356
Query: 360 -------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFH 406
++ ++WNS+I+G+ Q L E A++ + +R I FS L
Sbjct: 357 TMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLR 416
Query: 407 ACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPN-VA 465
+CS L +LQ GQ +HA K+ F SN +V +SL+ MYS+CG I A+ F ISS +
Sbjct: 417 SCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTV 476
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
AW A++ GY+ HGLG ++ LF M Q++ + TF +L+AC GL+ EG+++ M
Sbjct: 477 AWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLM 536
Query: 526 KS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
+ Y + P +EHY VDLLGR+G +++A+E I+ MP+ D +V L C +E+
Sbjct: 537 EPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEM 596
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
+ A + ++ + YV LS++Y+ L KW +K ++K + VKK PG SWIE+ +
Sbjct: 597 ATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRN 656
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANLN 674
+V AF+ EDR+NP C IY ++ LT +
Sbjct: 657 QVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/511 (22%), Positives = 217/511 (42%), Gaps = 95/511 (18%)
Query: 107 HCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLM 166
HC +K G +V + +L Y + A +FDE+ + + + W+ M+ GY C +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 167 SDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIR 226
DA+ C LF M+ SG ++ + Y+F +++
Sbjct: 83 EDAW---------------------------C-----LFTCMKRSGSDV-DGYSFSRLLK 109
Query: 227 ACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNA 286
A + F G+ VHGL+IK G+E + +G +L++ Y CE + A + + P +
Sbjct: 110 GIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVS 169
Query: 287 SNSLINGLISMGRIEDAELIFNRLTEANSISY---------------------------- 318
N+LI G + + I+ A + + +++
Sbjct: 170 WNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKV 229
Query: 319 ------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
N+MI YA G V D+KR+F+ + ++ ++W
Sbjct: 230 LKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG----------------SKDLISW 273
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ--GQLLHAHL 424
NSMI+G+ ++ L E A +L++ M++ ++ T++ L ACS G Q G+ LH +
Sbjct: 274 NSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS--GEEHQIFGKSLHGMV 331
Query: 425 VKTPFESNVYVGTSLVDMYSR--CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+K E +L+ MY + G++ DA + F S+ S ++ +W +++ G++ GL +
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 391
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542
AV F + +I + F +L +C + G +I G V + ++
Sbjct: 392 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIV 451
Query: 543 LLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
+ + G + A + + + + V W A++
Sbjct: 452 MYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 199/465 (42%), Gaps = 74/465 (15%)
Query: 234 FCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING 293
F + + H IKCG D + +++ Y A ++D + + N++I+G
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 294 LISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKR---LFEKMPHRSI 346
S G++EDA +F + ++ + S++ ++KG A + D ++ L K +
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN 135
Query: 347 ISL-NTMISVIPEMER--------------NPVTWNSMISGYVQNNLHEKALQLYMTMR- 390
+ + ++++ + + ER N V+WN++I+G+VQ + A L M
Sbjct: 136 VYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEM 195
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
K A+ TF+ L + +HA ++K + + + +++ Y+ CGS++
Sbjct: 196 KAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVS 255
Query: 451 DAQASFSSI-SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
DA+ F + S ++ +W +++ G+S H L A LF M + + T+ G+LSAC
Sbjct: 256 DAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSAC 315
Query: 510 ----------------VRAGL---------------------VNEGMKIFRSMKSYGVVP 532
++ GL + + + +F S+KS ++
Sbjct: 316 SGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLIS 375
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEF---IKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ ++ + G +A +F ++ I++D + ALL +C +++G
Sbjct: 376 ----WNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG---- 427
Query: 590 QKMFGLDKKP--ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632
Q++ L K +S ++S++ + K G RK + K
Sbjct: 428 QQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSK 472
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 323 bits (827), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 314/622 (50%), Gaps = 60/622 (9%)
Query: 104 KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQC 163
K IH ++++ F+ + ++ YA A+RVFD + + N W+ +L+ Y +
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 164 NLMSDAFDVFIKMPKKDVVVWTKLISGYAKS--VDGCEKALKLFRWMRESGENMPNEYTF 221
L+S+ F K+P +D V W LI GY+ S V KA MR+ N+ T
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM--MRDFSANL-TRVTL 142
Query: 222 DSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLEN 281
++++ + G GK +HG +IK GFE +G L+ Y A +V+ L++
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 282 PCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
NSL+ GL++ G IEDA +F R E +S+S+ +MIKG A G ++ F +M
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 342 ----------PHRSIISLNTMISVIPE--------------------------------- 358
P S++ + I E
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 359 ----------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHAC 408
++N V+W +M+ GY Q E+A+++++ M++ ID T AC
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 409 SCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+ + SL++G H + + V V SLV +Y +CG I+D+ F+ ++ + +WT
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS- 527
A+++ Y+ G E + LF+ M++ + P+ T GV+SAC RAGLV +G + F+ M S
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGER 587
YG+VP++ HY+C++DL RSG L EA FI MP DA+ W LLSAC N+E+G+
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKW 561
Query: 588 AAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVH 647
AA+ + LD + Y +LS+IYA GKW +R+ + VKK+PG SWI+ ++H
Sbjct: 562 AAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLH 621
Query: 648 AFSVEDRNNPNCNVIYATLEHL 669
+FS +D ++P + IYA LE L
Sbjct: 622 SFSADDESSPYLDQIYAKLEEL 643
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 245/519 (47%), Gaps = 67/519 (12%)
Query: 4 YATQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
YA + + Q L S N + + G + + F+++P R V+WN ++ GYS
Sbjct: 59 YARRVFDRIPQPNLF-SWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSG 117
Query: 64 KFDESLSLVSTMHRS-NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVG 122
++ +TM R + L T T+L + + + GKQIH V+K G+E + VG
Sbjct: 118 LVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVG 177
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
S LL+ YAN I +AK+VF L + N ++++ ++ G + C ++ DA +F M +KD V
Sbjct: 178 SPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSV 236
Query: 183 VWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
W +I G A+ +G K A++ FR M+ G M ++Y F SV+ AC LGA EGK +H
Sbjct: 237 SWAAMIKGLAQ--NGLAKEAIECFREMKVQGLKM-DQYPFGSVLPACGGLGAINEGKQIH 293
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
+I+ F+ +G ALI+ YC C+ A V+DR++ + + +++ G GR E
Sbjct: 294 ACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE 353
Query: 302 DAELIF----------NRLTEANSISY-----------------------------NSMI 322
+A IF + T +IS NS++
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
Y G +DDS RLF +M R+ V+W +M+S Y Q +
Sbjct: 414 TLYGKCGDIDDSTRLFNEMN-----------------VRDAVSWTAMVSAYAQFGRAVET 456
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG--TSLV 440
+QL+ M + + T + + ACS G +++GQ + L+ + + +G + ++
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ-RYFKLMTSEYGIVPSIGHYSCMI 515
Query: 441 DMYSRCGSINDAQASFSSIS-SPNVAAWTALMNGYSHHG 478
D++SR G + +A + + P+ WT L++ + G
Sbjct: 516 DLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 12/209 (5%)
Query: 401 FSVLFHACSCLGSLQQG---QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
+SV C LG+ Q +++H ++++ ++ ++V Y+ S A+ F
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
I PN+ +W L+ YS GL SE FE + ++D V T+ ++ +GLV
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGV----TWNVLIEGYSLSGLVGA 121
Query: 518 GMKIFRS-MKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576
+K + + M+ + T ++ L +GH+ ++ I I+L + L+ +
Sbjct: 122 AVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQ-IHGQVIKLGFESY-LLVGSP 179
Query: 577 WFWMNMEVG--ERAAQKMFGLDKKPISAY 603
+M VG A + +GLD + Y
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMY 208
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 322 bits (826), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/492 (37%), Positives = 273/492 (55%), Gaps = 51/492 (10%)
Query: 172 VFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231
VF + D +W +I G++ S D E++L L++ M S N YTF S+++AC+ L
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCS-DEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACSNL 128
Query: 232 GAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
AF E +H + K G+E D VY A NSLI
Sbjct: 129 SAFEETTQIHAQITKLGYEND----------------------VY---------AVNSLI 157
Query: 292 NGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
N G + A L+F+R+ E + +S+NS+IKGY G++D + LF KM
Sbjct: 158 NSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA--------- 208
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
E+N ++W +MISGYVQ +++++ALQL+ M+ ++ + + AC+ L
Sbjct: 209 --------EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260
Query: 412 GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALM 471
G+L+QG+ +H++L KT + +G L+DMY++CG + +A F +I +V AWTAL+
Sbjct: 261 GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALI 320
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGV 530
+GY++HG G EA+ F M + I PN TF VL+AC GLV EG IF SM + Y +
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380
Query: 531 VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQ 590
PT+EHY C+VDLLGR+G L EA+ FI++MP++ +AV+WGALL AC N+E+GE +
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGE 440
Query: 591 KMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFS 650
+ +D YV +NI+A+ KW K + R+ + V K PGCS I L H F
Sbjct: 441 ILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFL 500
Query: 651 VEDRNNPNCNVI 662
DR++P I
Sbjct: 501 AGDRSHPEIEKI 512
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 159/312 (50%), Gaps = 6/312 (1%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A+ +FD WN M+ G+S + + SL L M S+ N TF ++L
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
C+ L++ + QIH + K GYE + + L+ YA + A +FD + E +++ W
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++ GYV+ M A +F KM +K+ + WT +ISGY ++ D ++AL+LF M+ S +
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQA-DMNKEALQLFHEMQNS-D 242
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
P+ + + + ACA+LGA +GK +H L K D +G LI+ Y C + A+
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYG 329
V+ ++ + A +LI+G G +A F + + N I++ +++ + G
Sbjct: 303 EVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 330 QVDDSKRLFEKM 341
V++ K +F M
Sbjct: 363 LVEEGKLIFYSM 374
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 24/264 (9%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
VS N I + G++ A LF +M + +SW TM+ GY + E+L L M S
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS 241
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
+V+ + + + LS CAQL +L GK IH + K+ +G L+ YA C E+EEA
Sbjct: 242 DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP----KKDVVVWTKLISGYAKS 194
VF + + + W+ ++ GY +A F++M K +V+ +T +++ A S
Sbjct: 302 LEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLT--ACS 359
Query: 195 VDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGK------------VVH 241
G + KL + E N+ P + ++ R G E K V+
Sbjct: 360 YTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 419
Query: 242 GLLIKC-----GFEFDESIGGALI 260
G L+K E E IG LI
Sbjct: 420 GALLKACRIHKNIELGEEIGEILI 443
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 7/178 (3%)
Query: 404 LFHACSCLGSLQQGQLL---HAHLVKTPFESNVYVGTSLVDMYSRCGS---INDAQASFS 457
L+ SCL + + L HA ++KT + Y T + S + AQ F
Sbjct: 14 LYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFD 73
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
P+ W ++ G+S ++LL++ ML NA TF +L AC E
Sbjct: 74 GFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEE 133
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+I + G + +++ +G+ A +P E D V W +++
Sbjct: 134 TTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP-EPDDVSWNSVIKG 190
>sp|P0C7R0|PPR69_ARATH Pentatricopeptide repeat-containing protein At1g32415,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E56 PE=2
SV=1
Length = 761
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 212/672 (31%), Positives = 352/672 (52%), Gaps = 66/672 (9%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK--- 81
+++ + G L AR LF+ MP R +V+ N ML GY K + +E+ +L M ++ V
Sbjct: 84 LSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTV 143
Query: 82 -----------------LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGS- 123
+E ++S N+L+ G I ++ + F+ + S
Sbjct: 144 MLTALCDDGRSEDAVELFDEMPERNVVS----WNTLVTG-LIRNGDMEKAKQVFDAMPSR 198
Query: 124 ------GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP 177
++ Y +EEAK +F ++ E N + W+ M+ GY + + +A+ +F +MP
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Query: 178 KKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCE 236
++++V WT +ISG+A + + +AL LF M++ + + PN T S+ AC LG
Sbjct: 259 ERNIVSWTAMISGFAWN-ELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFR 317
Query: 237 --GKVVHGLLIKCGFE---FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLI 291
G+ +H +I G+E D + +L+ Y A + + E+ L + N +I
Sbjct: 318 RLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNIII 375
Query: 292 NGLISMGRIEDAELIFNRLTEA-NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
N + G +E AE +F R+ + +S+ SMI GY G V + LF+K+
Sbjct: 376 NRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL--------- 426
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
+++ VTW MISG VQN L +A L M + + ST+SVL +
Sbjct: 427 --------HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGA 478
Query: 411 LGSLQQGQLLHAHLVKTP--FESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWT 468
+L QG+ +H + KT ++ ++ + SLV MY++CG+I DA F+ + + +W
Sbjct: 479 TSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWN 538
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-S 527
+++ G SHHGL +A+ LF+ ML+ PN+ TF+GVLSAC +GL+ G+++F++MK +
Sbjct: 539 SMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKET 598
Query: 528 YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF-WMNME--- 583
Y + P ++HY ++DLLGR+G L EAEEFI +P D V+GALL C W + +
Sbjct: 599 YSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEG 658
Query: 584 VGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELN 643
+ ERAA ++ LD +V L N+YA LG+ + ++RK + VKK PGCSW+ +N
Sbjct: 659 IAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVN 718
Query: 644 SRVHAFSVEDRN 655
R + F D++
Sbjct: 719 GRANVFLSGDKS 730
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 216/470 (45%), Gaps = 102/470 (21%)
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+ LL YA ++EA+ +F+ + E N + + ML GYV+C M++A+ +F +MP K+VV
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVV 139
Query: 183 VWTKLISGYAKSVDG-CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
WT +++ DG E A++LF M E N ++++++ R G
Sbjct: 140 SWTVMLTALCD--DGRSEDAVELFDEMPER-----NVVSWNTLVTGLIRNG--------- 183
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
+ A +V+D + + + + N++I G I +E
Sbjct: 184 --------------------------DMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGME 217
Query: 302 DAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMER 361
+A+L+F ++E N +++ SM+ GY YG V ++ RLF +MP ER
Sbjct: 218 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP-----------------ER 260
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRK--LAIDRTRSTFSVLFHACSCLGS--LQQG 417
N V+W +MISG+ N L+ +AL L++ M+K A+ T L +AC LG + G
Sbjct: 261 NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLG 320
Query: 418 QLLHAHLVKTPFESNVYVG---TSLVDMYSRCGSINDAQASFS---SISSPNV------- 464
+ LHA ++ +E+ + G SLV MY+ G I AQ+ + + S N+
Sbjct: 321 EQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLK 380
Query: 465 --------------------AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVG 504
+WT++++GY G S A LF+ + ++D V T+
Sbjct: 381 NGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV----TWTV 436
Query: 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAE 554
++S V+ L E + M G+ P Y+ ++ G + +L + +
Sbjct: 437 MISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 58/271 (21%)
Query: 289 SLINGLISMGRIEDAELIFNRLTEANSIS----YNSMIKGYAVYGQVDDSKRLFEKMPHR 344
+LI +S G + A + +++ + SI+ + S++ YA G +D+++ LFE MP R
Sbjct: 47 ALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER 106
Query: 345 SIISLNTMIS-------------------------------------------VIPEM-E 360
+I++ N M++ + EM E
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPE 166
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
RN V+WN++++G ++N EKA Q++ M R +++ + +++ +LL
Sbjct: 167 RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPS----RDVVSWNAMIKGYIENDGMEEAKLL 222
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
+ E NV TS+V Y R G + +A F + N+ +WTA+++G++ + L
Sbjct: 223 FGDMS----EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELY 278
Query: 481 SEAVLLF-EIMLEQDIV-PNAATFVGVLSAC 509
EA++LF E+ + D V PN T + + AC
Sbjct: 279 REALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 6 TQSQTLMTQETLIVSTNKAITECGRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAK 64
+Q+L+ + + S N I +NG L A LF+++ + VSW +M+ GY +
Sbjct: 356 ASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGD 415
Query: 65 -------------------------------FDESLSLVSTMHRSNVKLNETTFSTILSV 93
F E+ SL+S M R +K +T+S +LS
Sbjct: 416 VSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSS 475
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFE---FVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
++L GK IHC++ K+ C++ + + L+ YA C IE+A +F ++ + +
Sbjct: 476 AGATSNLDQGKHIHCVIAKT-TACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDT 534
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKM----PKKDVVVWTKLISGYAKSVDGCEKALKLFR 206
+ W+ M++G L A ++F +M K + V + ++S + S + L+LF+
Sbjct: 535 VSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHS-GLITRGLELFK 593
Query: 207 WMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCG 265
M+E+ P + S+I R G E + L F D ++ GAL+ CG
Sbjct: 594 AMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISAL---PFTPDHTVYGALLGL-CG 648
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 321 bits (822), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 206/666 (30%), Positives = 343/666 (51%), Gaps = 59/666 (8%)
Query: 36 TARNLFDQMPIRT-VVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNET-TFSTILSV 93
+AR++F+ IR+ V WN+++ GYSK + F ++L + + ++ + ++ TF ++
Sbjct: 57 SARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA 116
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
L G+ IH LV+KSGY C V S L+ YA E + +VFDE
Sbjct: 117 YGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDE--------- 167
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
MP++DV W +IS + +S + EKAL+LF M SG
Sbjct: 168 ----------------------MPERDVASWNTVISCFYQSGEA-EKALELFGRMESSGF 204
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
PN + I AC+RL GK +H +K GFE DE + AL++ Y C+ + A
Sbjct: 205 E-PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR 263
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNS--------- 320
V+ ++ L A NS+I G ++ G + I NR+ T + + S
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSR 323
Query: 321 -MIKGYAVYGQVDDSKRLFEKMPHRSIISL-------NTMISVIPEMERNPV-TWNSMIS 371
++ G ++G V S + + S+I L N +V + +++ +WN MIS
Sbjct: 324 NLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMIS 383
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFES 431
Y+ KA+++Y M + + TF+ + ACS L +L++G+ +H + ++ E+
Sbjct: 384 SYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLET 443
Query: 432 NVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIML 491
+ + ++L+DMYS+CG+ +A F+SI +V +WT +++ Y HG EA+ F+ M
Sbjct: 444 DELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQ 503
Query: 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHL 550
+ + P+ T + VLSAC AGL++EG+K F M+S YG+ P +EHY+C++D+LGR+G L
Sbjct: 504 KFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRL 563
Query: 551 HEAEEFIKDMPIELD-AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609
EA E I+ P D A + L SAC + +G+R A+ + S Y++L N+
Sbjct: 564 LEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNL 623
Query: 610 YAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
YA W +R ++ + ++K PGCSWIE++ +V F EDR++ +Y L L
Sbjct: 624 YASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALL 683
Query: 670 TANLNS 675
+ ++ S
Sbjct: 684 SGHMES 689
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 219/474 (46%), Gaps = 66/474 (13%)
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMP-KKDVVVWTKLISGYAKSVDGCEKALK 203
L D L SL+ V Y C A VF + DV +W L+SGY+K+ L+
Sbjct: 35 LRRDVVLCKSLINV-YFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKN-SMFHDTLE 92
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
+F+ + +P+ +TF +VI+A LG G+++H L++K G+ D + +L+ Y
Sbjct: 93 VFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMY 152
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYN 319
F+ +++V+D + + + N++I+ G E A +F R+ E NS+S
Sbjct: 153 AKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLT 212
Query: 320 SMI---------------------KGYAV-----------YGQVD---DSKRLFEKMPHR 344
I KG+ + YG+ D ++ +F+KMP +
Sbjct: 213 VAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK 272
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR---STF 401
S+ V WNSMI GYV + +++ + ++ I+ TR +T
Sbjct: 273 SL-----------------VAWNSMIKGYVAKGDSKSCVEI---LNRMIIEGTRPSQTTL 312
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS 461
+ + ACS +L G+ +H +++++ +++YV SL+D+Y +CG N A+ FS
Sbjct: 313 TSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQK 372
Query: 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
+W +++ Y G +AV +++ M+ + P+ TF VL AC + + +G +I
Sbjct: 373 DVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQI 432
Query: 522 FRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
S+ + + ++D+ + G+ EA +P + D V W ++SA
Sbjct: 433 HLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISA 485
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 174/407 (42%), Gaps = 85/407 (20%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ L AR +F +MP +++V+WN+M+ GY + +++ M + ++TT +
Sbjct: 254 GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLT 313
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+IL C++ +L+ GK IH V++S +V L+ Y C E A+ VF + +D
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
W++M+ Y+ SV KA++++ M
Sbjct: 374 VAESWNVMISSYI--------------------------------SVGNWFKAVEVYDQM 401
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
G P+ TF SV+ AC++L A +GK +H + + E DE + AL++ Y C
Sbjct: 402 VSVGVK-PDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC-- 458
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
G ++A IFN + + + +S+ MI Y +
Sbjct: 459 -----------------------------GNEKEAFRIFNSIPKKDVVSWTVMISAYGSH 489
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
GQ ++ F++M ++ + VT +++S L ++ L+ +
Sbjct: 490 GQPREALYQFDEMQKFG-------------LKPDGVTLLAVLSACGHAGLIDEGLKFFSQ 536
Query: 389 MR-KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV--KTPFESN 432
MR K I+ +S + LG + G+LL A+ + +TP S+
Sbjct: 537 MRSKYGIEPIIEHYSCMI---DILG--RAGRLLEAYEIIQQTPETSD 578
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
S+L + SL++ +L+H ++ +V + SL+++Y C A+ F +
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 461 -SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI-VPNAATFVGVLSACVRAGLVNEG 518
+V W +LM+GYS + + + + +F+ +L I VP++ TF V+ A G G
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
I + G V + + +V + + + + +MP E D W ++S C++
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTVIS-CFY 184
Query: 579 WMNMEVGE-RAAQKMFG 594
+ GE A ++FG
Sbjct: 185 ----QSGEAEKALELFG 197
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 299/549 (54%), Gaps = 28/549 (5%)
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
+EA+++FDE+ E N + W+ ++ GY++ ++ +A +VF MP+++VV WT ++ GY +
Sbjct: 65 KEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQE- 123
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLL-IKCGFEFDES 254
+A LF M E NE ++ + G + + ++ ++ +K
Sbjct: 124 GMVGEAESLFWRMPER-----NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNM 178
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN 314
IGG C D A ++D + + ++I G R++ A +F + E
Sbjct: 179 IGG-----LCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKT 233
Query: 315 SISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------E 360
+S+ SM+ GY + G+++D++ FE MP + +I+ N MI E+ +
Sbjct: 234 EVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMED 293
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
R+ TW MI Y + +AL L+ M+K + + + + C+ L SLQ G+ +
Sbjct: 294 RDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HAHLV+ F+ +VYV + L+ MY +CG + A+ F SS ++ W ++++GY+ HGLG
Sbjct: 354 HAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLG 413
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTC 539
EA+ +F M +PN T + +L+AC AG + EG++IF SM+S + V PT+EHY+C
Sbjct: 414 EEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
Query: 540 VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599
VD+LGR+G + +A E I+ M I+ DA VWGALL AC +++ E AA+K+F +
Sbjct: 474 TVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDN 533
Query: 600 ISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED-RNNPN 658
YV+LS+I A KWG +RK + V K PGCSWIE+ +VH F+ +N+P
Sbjct: 534 AGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPE 593
Query: 659 CNVIYATLE 667
+I LE
Sbjct: 594 QAMILMMLE 602
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 203/490 (41%), Gaps = 96/490 (19%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +VS N ++ +N +V ARN+F+ MP R VVSW M+ GY + E+ SL
Sbjct: 76 ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLV-LKSGYECFEFVGSGLLFFYANCF 133
M N E +++ + + ++++ ++ +K +G GL C
Sbjct: 136 MPERN----EVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIG-GL------CR 184
Query: 134 E--IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
E ++EA+ +FDE+ E N + W+ M+ GY Q N + A +F MP+K V WT ++ GY
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGY 244
Query: 192 A-----------------KSVDGC-------------EKALKLFRWMRE----SGENMPN 217
K V C KA ++F M + + M
Sbjct: 245 TLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIK 304
Query: 218 EY-----------------------TFDSVI---RACARLGAFCEGKVVHGLLIKCGFEF 251
Y +F S+I CA L + G+ VH L++C F+
Sbjct: 305 AYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD 364
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL- 310
D + L+ Y C A V+DR + + NS+I+G S G E+A IF+ +
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424
Query: 311 ---TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
T N ++ +++ + G++++ +FE S+ + V P +E T +
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFE--------SMESKFCVTPTVEHYSCTVD 476
Query: 368 SM-ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
+ +G V +KA++L +M I + + L AC L ++ L +
Sbjct: 477 MLGRAGQV-----DKAMELIESM---TIKPDATVWGALLGACKTHSRLDLAEVAAKKLFE 528
Query: 427 T-PFESNVYV 435
P + YV
Sbjct: 529 NEPDNAGTYV 538
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 49/325 (15%)
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQV 331
A + +D L+ + + NS+++G S G ++A +F+ ++E N +S+N ++ GY +
Sbjct: 36 ARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMI 95
Query: 332 DDSKRLFEKMPHRSIISLNTMI-------------SVIPEM-ERNPVTWNSMISGYVQNN 377
+++ +FE MP R+++S M+ S+ M ERN V+W M G + +
Sbjct: 96 VEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDG 155
Query: 378 LHEKALQLYMTM----------------RKLAIDRTRSTF------SVLFHACSCLGSLQ 415
+KA +LY M R+ +D R F +V+ G Q
Sbjct: 156 RIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQ 215
Query: 416 QGQL-LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
++ + L + E TS++ Y+ G I DA+ F + V A A++ G+
Sbjct: 216 NNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGF 275
Query: 475 SHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL 534
G S+A +F++M ++D AT+ G++ A R G E + +F M+ GV P+
Sbjct: 276 GEVGEISKARRVFDLMEDRD----NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSF 331
Query: 535 EHYTCVVDL--------LGRSGHLH 551
++ + GR H H
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAH 356
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 17/181 (9%)
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
SR G IN+A+ F S+ + +W ++++GY +GL EA LF+ M E+++V ++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVV----SWN 83
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
G++S ++ ++ E +F M VV +T +V + G + EAE MP E
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVS----WTAMVKGYMQEGMVGEAESLFWRMP-E 138
Query: 564 LDAVVWGALLSACWFWMNMEVGE-RAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDI 622
+ V W + ++ G A+K++ D P+ V +N+ L + G+ +
Sbjct: 139 RNEVSWTVMFGGL-----IDDGRIDKARKLY--DMMPVKDVVASTNMIGGLCREGRVDEA 191
Query: 623 R 623
R
Sbjct: 192 R 192
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 320 bits (820), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 208/698 (29%), Positives = 337/698 (48%), Gaps = 91/698 (13%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
M E+ + N + R G L AR +FD+MP+R +VSWN+++ GYS ++E+L +
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 72 VSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYAN 131
+ S + + T S++L L + G+ +H LKSG V +GL+ Y
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 254
Query: 132 CFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGY 191
+A+RVFDE M +D V + +I GY
Sbjct: 255 FRRPTDARRVFDE-------------------------------MDVRDSVSYNTMICGY 283
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
K ++ E+++++F + + P+ T SV+RAC L K ++ ++K GF
Sbjct: 284 LK-LEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 340
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT 311
+ ++ LI+ Y C A V++ +E + NS+I+G I G + +A +F +
Sbjct: 341 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 312 ----EANSISY-----------------------------------NSMIKGYAVYGQVD 332
+A+ I+Y N++I YA G+V
Sbjct: 401 IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 460
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
DS ++F M + VTWN++IS V+ LQ+ MRK
Sbjct: 461 DSLKIFSSMG-----------------TGDTVTWNTVISACVRFGDFATGLQVTTQMRKS 503
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ +TF V C+ L + + G+ +H L++ +ES + +G +L++MYS+CG + ++
Sbjct: 504 EVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENS 563
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
F +S +V WT ++ Y +G G +A+ F M + IVP++ F+ ++ AC +
Sbjct: 564 SRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHS 623
Query: 513 GLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GLV+EG+ F MK+ Y + P +EHY CVVDLL RS + +AEEFI+ MPI+ DA +W +
Sbjct: 624 GLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWAS 683
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
+L AC +ME ER ++++ L+ ++ SN YA L KW K IRK L +
Sbjct: 684 VLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHI 743
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
K+PG SWIE+ VH FS D + P IY +LE L
Sbjct: 744 TKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEIL 781
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 140/590 (23%), Positives = 271/590 (45%), Gaps = 60/590 (10%)
Query: 45 PIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGK 104
P + V WN+++ +SK F E+L + S V ++ TF +++ CA L G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 105 QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
++ +L G+E FVG+ L+ Y+ + A++VFDE
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDE-------------------- 166
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
MP +D+V W LISGY+ S E+AL+++ ++ S +P+ +T SV
Sbjct: 167 -----------MPVRDLVSWNSLISGYS-SHGYYEEALEIYHELKNSW-IVPDSFTVSSV 213
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+ A L +G+ +HG +K G + L+ Y A RV+D ++
Sbjct: 214 LPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS 273
Query: 285 NASNSLINGLISMGRIEDAELIF-NRLTE--ANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ N++I G + + +E++ +F L + + ++ +S+++ + +K ++ M
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 342 PH---------RSII--------SLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKAL 383
R+I+ + T V ME ++ V+WNS+ISGY+Q+ +A+
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 384 QLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMY 443
+L+ M + T+ +L + L L+ G+ LH++ +K+ ++ V +L+DMY
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY 453
Query: 444 SRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFV 503
++CG + D+ FSS+ + + W +++ G + + + M + ++VP+ ATF+
Sbjct: 454 AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFL 513
Query: 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIE 563
L C G +I + +G L+ ++++ + G L + + M
Sbjct: 514 VTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS-R 572
Query: 564 LDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI--SAYVILSNIYA 611
D V W ++ A + M E GE+A + ++K I + V ++ IYA
Sbjct: 573 RDVVTWTGMIYA--YGMYGE-GEKALETFADMEKSGIVPDSVVFIAIIYA 619
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 4/187 (2%)
Query: 334 SKRLFEKMPH--RSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
S +L +K H SL+ V P +N WNS+I + +N L +AL+ Y +R+
Sbjct: 42 SGKLIDKYSHFREPASSLSVFRRVSPA--KNVYLWNSIIRAFSKNGLFPEALEFYGKLRE 99
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+ + TF + AC+ L + G L++ ++ FES+++VG +LVDMYSR G +
Sbjct: 100 SKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTR 159
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
A+ F + ++ +W +L++GYS HG EA+ ++ + IVP++ T VL A
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGN 219
Query: 512 AGLVNEG 518
+V +G
Sbjct: 220 LLVVKQG 226
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 6/183 (3%)
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
+TR + + A S +L + + +HA ++ +S+ + L+D YS + +
Sbjct: 2 QTRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSV 61
Query: 456 FSSIS-SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F +S + NV W +++ +S +GL EA+ + + E + P+ TF V+ AC AGL
Sbjct: 62 FRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGL 119
Query: 515 VNEGMK--IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
+ M ++ + G L +VD+ R G L A + +MP+ D V W +L
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSL 178
Query: 573 LSA 575
+S
Sbjct: 179 ISG 181
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 199/668 (29%), Positives = 339/668 (50%), Gaps = 58/668 (8%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G + A +F+ + + V ++TML G++K + D++L M +V+ F+
Sbjct: 81 RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY 140
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+L VC L GK+IH L++KSG+ F +GL YA C ++ EA++VFD + E +
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W+ ++ GY Q + A ++ M CE+ LK
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSM---------------------CEENLK------ 233
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
P+ T SV+ A + L GK +HG ++ GF+ +I AL++ Y C +
Sbjct: 234 ------PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL 287
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
+ A +++D + + + NS+I+ + ++A LIF ++ + + + G A++
Sbjct: 288 ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG-ALHA 346
Query: 330 QVD----DSKRLFEKMP-----HRSIISLNTMISVIPE--------------MERNPVTW 366
D + R K+ R++ +N++IS+ + R V+W
Sbjct: 347 CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW 406
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
N+MI G+ QN AL + MR + T+ + A + L + +H +++
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLL 486
+ + NV+V T+LVDMY++CG+I A+ F +S +V W A+++GY HG G A+ L
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALEL 526
Query: 487 FEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLG 545
FE M + I PN TF+ V+SAC +GLV G+K F MK +Y + +++HY +VDLLG
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLG 586
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVI 605
R+G L+EA +FI MP++ V+GA+L AC N+ E+AA+++F L+ +V+
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVL 646
Query: 606 LSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYAT 665
L+NIY W K +R + ++K PGCS +E+ + VH+F +P+ IYA
Sbjct: 647 LANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAF 706
Query: 666 LEHLTANL 673
LE L ++
Sbjct: 707 LEKLICHI 714
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 214/518 (41%), Gaps = 67/518 (12%)
Query: 84 ETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
E + +L C+ L L +QI LV K+G F + L+ + ++EA RVF+
Sbjct: 37 EHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFE 93
Query: 144 ELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALK 203
+ +L+ ML G+ + + + A F++M DV
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV---------------------- 131
Query: 204 LFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFY 263
P Y F +++ C GK +HGLL+K GF D L Y
Sbjct: 132 -----------EPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMY 180
Query: 264 CGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN--------- 314
C + A +V+DR+ L + N+++ G G A + + E N
Sbjct: 181 AKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIV 240
Query: 315 ----------SISYNSMIKGYAVYGQVDDSKRLFEKMP--HRSIISLNTMISVIPEM-ER 361
IS I GYA+ D + + + SL T + M ER
Sbjct: 241 SVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER 300
Query: 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLH 421
N V+WNSMI YVQN ++A+ ++ M + T + HAC+ LG L++G+ +H
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Query: 422 AHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGS 481
V+ + NV V SL+ MY +C ++ A + F + S + +W A++ G++ +G
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI 420
Query: 482 EAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI----FRSMKSYGVVPTLEHY 537
+A+ F M + + P+ T+V V++A + + I RS V T
Sbjct: 421 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT---- 476
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
T +VD+ + G + A I DM E W A++
Sbjct: 477 TALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDG 513
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 317 bits (811), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 200/667 (29%), Positives = 341/667 (51%), Gaps = 65/667 (9%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDE-SLSLVSTMHRS 78
+ N I+ R G L AR +FD+MP R VVS+N + YS+ F + L + M
Sbjct: 134 ANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFE 193
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEA 138
VK N +TF++++ VCA L ++ G ++ ++K GY V + +L Y++C ++E A
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+R+ FD + +D V W +I G K+ D
Sbjct: 254 RRI----------------------------FDC---VNNRDAVAWNTMIVGSLKN-DKI 281
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
E L FR M SG + P ++T+ V+ C++LG++ GK++H +I D + A
Sbjct: 282 EDGLMFFRNMLMSGVD-PTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNA 340
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
L++ YC C A V+ R+ NP L + NS+I+G G E A L++ RL ++
Sbjct: 341 LLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRP 400
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPH---------RSIISLNTMISVIPE----------- 358
+ A+ + + + K+ H RS+ T++S+ +
Sbjct: 401 DEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVF 460
Query: 359 ---MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS---TFSVLFHACSCLG 412
ER+ V W MI G+ + E A+Q ++ M + ++ RS + S + ACS +
Sbjct: 461 DVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYR---EKNRSDGFSLSSVIGACSDMA 517
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
L+QG++ H ++T F+ + V +LVDMY + G A+ FS S+P++ W +++
Sbjct: 518 MLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLG 577
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
YS HG+ +A+ FE +LE +P+A T++ +L+AC G +G ++ MK G+
Sbjct: 578 AYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKA 637
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFIKDMPI-ELDAVVWGALLSACWFWMNMEVGERAAQK 591
+HY+C+V+L+ ++G + EA E I+ P A +W LLSAC N+++G AA++
Sbjct: 638 GFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQ 697
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL-NSRVHAFS 650
+ LD + + +++LSN+YAV G+W ++R+++ L KDPG SWIE+ N+ FS
Sbjct: 698 ILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFS 757
Query: 651 VEDRNNP 657
D++NP
Sbjct: 758 SGDQSNP 764
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 156/603 (25%), Positives = 258/603 (42%), Gaps = 95/603 (15%)
Query: 20 STNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN 79
+ N I+ R L AR +FD+MP R +V+ L G S A F E +S+ S++H
Sbjct: 24 ANNNLISMYVRCSSLEQARKVFDKMPQRNIVT----LFGLS--AVF-EYVSMGSSLHSQI 76
Query: 80 VKL-----------NETTFSTI--LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
+KL NE S + C + L +QIH LVL +G G+
Sbjct: 77 IKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAG------AGAATE 130
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
YAN N L+ YV+C + A VF KMP ++VV +
Sbjct: 131 SPYAN-----------------NNLISM-----YVRCGSLEQARKVFDKMPHRNVVSYNA 168
Query: 187 LISGYAKSVDGCEKALKL-----FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVH 241
L S Y+++ D A L F +++ PN TF S+++ CA L G ++
Sbjct: 169 LYSAYSRNPDFASYAFPLTTHMAFEYVK------PNSSTFTSLVQVCAVLEDVLMGSSLN 222
Query: 242 GLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIE 301
+IK G+ + + +++ Y C + A R++D + N A N++I G + +IE
Sbjct: 223 SQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIE 282
Query: 302 DAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSII---------- 347
D + F + + +Y+ ++ G + G K+ H II
Sbjct: 283 DGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS-----LGKLIHARIIVSDSLADLPL 337
Query: 348 --SLNTMISVIPEMER---------NP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+L M +M NP V+WNS+ISG +N E+A+ +Y + +++
Sbjct: 338 DNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMST 397
Query: 395 DRTRS-TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
R TFS A + G+LLH + K +E +V+VGT+L+ MY + AQ
Sbjct: 398 PRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQ 457
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAG 513
F + +V WT ++ G+S G AV F M + + + V+ AC
Sbjct: 458 KVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMA 517
Query: 514 LVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
++ +G ++F + G + +VD+ G++G +E E I + D W ++
Sbjct: 518 MLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGK-YETAETIFSLASNPDLKCWNSM 575
Query: 573 LSA 575
L A
Sbjct: 576 LGA 578
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG----SEAVLL--F 487
Y +L+ MY RC S+ A+ F + N+ L + + +G S+ + L F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTC---VVDLL 544
+++ + A++ V + CV ++ +I + + G E ++ +
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
R G L +A + MP + V + AL SA
Sbjct: 143 VRCGSLEQARKVFDKMP-HRNVVSYNALYSA 172
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 315 bits (808), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 210/663 (31%), Positives = 326/663 (49%), Gaps = 63/663 (9%)
Query: 7 QSQTLMTQETL---IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
QS ++T L I K ++ G G AR +FDQ+P W ML Y
Sbjct: 62 QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNK 121
Query: 64 KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE-FVG 122
+ E + L + + + ++ FS L C +L L +GK+IHC ++K F+ V
Sbjct: 122 ESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK--VPSFDNVVL 179
Query: 123 SGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVV 182
+GLL YA C EI+ A + VF + ++VV
Sbjct: 180 TGLLDMYAKCGEIKSAHK-------------------------------VFNDITLRNVV 208
Query: 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHG 242
WT +I+GY K+ D CE+ L LF MRE+ + NEYT+ ++I AC +L A +GK HG
Sbjct: 209 CWTSMIAGYVKN-DLCEEGLVLFNRMRENNV-LGNEYTYGTLIMACTKLSALHQGKWFHG 266
Query: 243 LLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIED 302
L+K G E + +L++ Y C A RV++ + L ++I G G + +
Sbjct: 267 CLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE 326
Query: 303 AELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIP- 357
A +F ++ + N ++ S++ G + ++ + + I N +++
Sbjct: 327 ALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHM 386
Query: 358 ----------------EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTF 401
E E++ V WNS+ISG+ QN +AL L+ M ++ T
Sbjct: 387 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTV 446
Query: 402 SVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
+ LF AC+ LGSL G LHA+ VK F S+V+VGT+L+D Y++CG A+ F +I
Sbjct: 447 ASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTI 506
Query: 460 SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
N W+A++ GY G ++ LFE ML++ PN +TF +LSAC G+VNEG
Sbjct: 507 EEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGK 566
Query: 520 KIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWF 578
K F SM K Y P+ +HYTC+VD+L R+G L +A + I+ MPI+ D +GA L C
Sbjct: 567 KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGM 626
Query: 579 WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCS 638
++GE +KM L S YV++SN+YA G+W + ++R + + K G S
Sbjct: 627 HSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Query: 639 WIE 641
+E
Sbjct: 687 TME 689
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 315 bits (806), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 213/687 (31%), Positives = 344/687 (50%), Gaps = 85/687 (12%)
Query: 27 ECGRNGQLVTARNLFDQMPIRTVVSWNTM---LCGYSKWAKFDESLSLVSTMHRSNVKLN 83
+CG G + +FD++ R VSWN++ LC + KW + +L M NV+ +
Sbjct: 145 KCGDFGAVY---KVFDRISERNQVSWNSLISSLCSFEKW---EMALEAFRCMLDENVEPS 198
Query: 84 ETTFSTILSVCAQL---NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
T ++++ C+ L L+ GKQ+H L+ G E F+ + L+ Y ++ +K
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSK- 256
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
+L+G +D+V W ++S ++ E
Sbjct: 257 ---------------VLLG---------------SFGGRDLVTWNTVLSSLCQNEQLLE- 285
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES--IGGA 258
AL+ R M G P+E+T SV+ AC+ L GK +H +K G DE+ +G A
Sbjct: 286 ALEYLREMVLEGVE-PDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSA 343
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING-----------LISMGRIEDAELIF 307
L++ YC C+ RV+D + + + N++I G L+ +G E A L+
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 308 NRLTEAN---------SISYNSMIKGYAVYGQVDDSKRLFEKMP--HRSIISLNTMISVI 356
N T A + S I G+ V +D + + + + + ++ + +
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 357 PEME-RNPVTWNSMISGYVQNNLHEKALQLYMTM----RKLAIDRTRS-------TFSVL 404
+ME R+ VTWN+MI+GYV + HE AL L M RK++ +R T +
Sbjct: 464 GKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTI 523
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
+C+ L +L +G+ +HA+ +K ++V VG++LVDMY++CG + ++ F I NV
Sbjct: 524 LPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNV 583
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
W ++ Y HG G EA+ L +M+ Q + PN TF+ V +AC +G+V+EG++IF
Sbjct: 584 ITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYV 643
Query: 525 MK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD-AVVWGALLSACWFWMNM 582
MK YGV P+ +HY CVVDLLGR+G + EA + + MP + + A W +LL A N+
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL 703
Query: 583 EVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIEL 642
E+GE AAQ + L+ S YV+L+NIY+ G W K ++R+ + V+K+PGCSWIE
Sbjct: 704 EIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEH 763
Query: 643 NSRVHAFSVEDRNNPNCNVIYATLEHL 669
VH F D ++P + LE L
Sbjct: 764 GDEVHKFVAGDSSHPQSEKLSGYLETL 790
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 135/551 (24%), Positives = 235/551 (42%), Gaps = 80/551 (14%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N + G+ G+L +++ L R +V+WNT+L + + E+L + M V+
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG-YECFEFVGSGLLFFYANCFEIEEAKR 140
+E T S++L C+ L L GK++H LK+G + FVGS L+ Y NC ++ +R
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VFD + + LW+ M+ GY Q + D ++
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQ-----NEHD---------------------------KE 387
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALI 260
AL LF M ES + N T V+ AC R GAF + +HG ++K G + D + L+
Sbjct: 388 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Query: 261 EFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT--------- 311
+ Y D AMR++ ++E+ L N++I G + EDA L+ +++
Sbjct: 448 DMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 312 ------EANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM------ 359
+ NSI+ +++ A + K + ++ + + S + +M
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567
Query: 360 ------------ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA 407
++N +TWN +I Y + ++A+ L M + TF +F A
Sbjct: 568 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAA 627
Query: 408 CSCLGSLQQGQLLHAHLVKTP---FESNVYVGTSLVDMYSRCGSINDAQASFSSISSP-- 462
CS G + +G L V P E + +VD+ R G I +A + +
Sbjct: 628 CSHSGMVDEG--LRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 685
Query: 463 NVAAWTALMNGYSHHG---LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGM 519
AW++L+ H +G A I LE ++ + + S+ AGL ++
Sbjct: 686 KAGAWSSLLGASRIHNNLEIGEIAAQNL-IQLEPNVASHYVLLANIYSS---AGLWDKAT 741
Query: 520 KIFRSMKSYGV 530
++ R+MK GV
Sbjct: 742 EVRRNMKEQGV 752
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 174/427 (40%), Gaps = 62/427 (14%)
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE-SIGGALIEFYCGCEAFDGAMR 274
P+ Y F ++++A A L GK +H + K G+ D ++ L+ Y C F +
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 275 VYDRLENPCLNASNSLINGLISMGRIEDAELIFN-------------------------- 308
V+DR+ + NSLI+ L S + E A F
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 309 ---------------RLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMI 353
R E NS N+++ Y G++ SK L R +
Sbjct: 215 PEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL------- 267
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
VTWN+++S QN +AL+ M ++ T S + ACS L
Sbjct: 268 ----------VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 414 LQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
L+ G+ LHA+ +K + N +VG++LVDMY C + + F + + W A++
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 473 GYSHHGLGSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV 531
GYS + EA+LLF M E ++ N+ T GV+ ACVR+G + I + G+
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 532 PTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
++D+ R G + A M + D V W +++ F + E K
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 592 MFGLDKK 598
M L++K
Sbjct: 497 MQNLERK 503
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 127/553 (22%), Positives = 217/553 (39%), Gaps = 110/553 (19%)
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEA 138
+K + F +L A L + GKQIH V K GY V + L+ Y C +
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+VFD + E N+ V W LIS S +
Sbjct: 153 YKVFDRISERNQ-------------------------------VSWNSLISSLC-SFEKW 180
Query: 199 EKALKLFRWMRESGENM-PNEYTFDSVIRACARLG---AFCEGKVVHGLLIKCGFEFDES 254
E AL+ FR M + EN+ P+ +T SV+ AC+ L GK VH ++ G E +
Sbjct: 181 EMALEAFRCMLD--ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSF 237
Query: 255 IGGALIEFY-------------------------------CGCEAFDGAMR-----VYDR 278
I L+ Y C E A+ V +
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 279 LENPCLNASNSLIN----GLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334
+E S+ L ++ G+ A + N + NS ++++ Y QV
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357
Query: 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA- 393
+R+F+ M R I WN+MI+GY QN ++AL L++ M + A
Sbjct: 358 RRVFDGMFDRKI-----------------GLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 394 IDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQ 453
+ +T + + AC G+ + + +H +VK + + +V +L+DMYSR G I+ A
Sbjct: 401 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 454 ASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM--LEQDIV---------PNAATF 502
F + ++ W ++ GY +A+LL M LE+ + PN+ T
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPI 562
+ +L +C + +G +I + + + +VD+ + G L + + +P
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP- 579
Query: 563 ELDAVVWGALLSA 575
+ + + W ++ A
Sbjct: 580 QKNVITWNVIIMA 592
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 6/226 (2%)
Query: 354 SVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
S+ R+P W ++ V++NL +A+ Y+ M L I F L A + L
Sbjct: 53 SIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQD 112
Query: 414 LQQGQLLHAHLVKTPFE-SNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
++ G+ +HAH+ K + +V V +LV++Y +CG F IS N +W +L++
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 473 GYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP 532
A+ F ML++++ P++ T V V++AC + EG+ + + + +YG+
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRK 231
Query: 533 -TLEHY--TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
L + +V + G+ G L ++ + D V W +LS+
Sbjct: 232 GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSS 276
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 313 bits (803), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 202/665 (30%), Positives = 334/665 (50%), Gaps = 64/665 (9%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
++ A +F+ + + V WN M+ GY+ + + + L M S +++ TF+++LS
Sbjct: 377 KMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
CA + L G Q H +++K FVG+ L+ YA C +E
Sbjct: 437 TCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE---------------- 480
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
DA +F +M +D V W +I Y + + E A LF+ M G
Sbjct: 481 ---------------DARQIFERMCDRDNVTWNTIIGSYVQDENESE-AFDLFKRMNLCG 524
Query: 213 ENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
+ + S ++AC + +GK VH L +KCG + D G +LI+ Y C A
Sbjct: 525 -IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN----RLTEANSISYNSMIK----- 323
+V+ L + + N+LI G S +E+A ++F R + I++ ++++
Sbjct: 584 RKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKP 642
Query: 324 -----GYAVYGQVDDSKRLFEKMPHRSIISLNTMI----------SVIPEME--RNPVTW 366
G +GQ+ +KR F ISL M ++ E+ ++ V W
Sbjct: 643 ESLTLGTQFHGQI--TKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLW 700
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
M+SG+ QN +E+AL+ Y MR + ++TF + CS L SL++G+ +H+ +
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760
Query: 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS-PNVAAWTALMNGYSHHGLGSEAVL 485
+ + +L+DMY++CG + + F + NV +W +L+NGY+ +G +A+
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALK 820
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLL 544
+F+ M + I+P+ TF+GVL+AC AG V++G KIF M YG+ ++H C+VDLL
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR G+L EA++FI+ ++ DA +W +LL AC + GE +A+K+ L+ + SAYV
Sbjct: 881 GRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYV 940
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+LSNIYA G W K +RK + VKK PG SWI++ R H F+ D+++ I
Sbjct: 941 LLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEM 1000
Query: 665 TLEHL 669
LE L
Sbjct: 1001 FLEDL 1005
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 168/622 (27%), Positives = 275/622 (44%), Gaps = 102/622 (16%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
Q+ A FD + + V +WN+ML YS K + L ++ + + N+ TFS +L
Sbjct: 109 AQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVL 167
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S CA+ ++ G+QIHC ++K G E + G L+ YA C I +A+RVF+ + + N +
Sbjct: 168 STCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTV 227
Query: 152 LWSLMLVGYVQCNL-----------------------------------MSDAFDVFIKM 176
W+ + GYV+ L + DA +F +M
Sbjct: 228 CWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM 287
Query: 177 PKKDVVVWTKLISGYAKSVDGCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFC 235
DVV W +ISG+ K GCE A++ F MR+S T SV+ A +
Sbjct: 288 SSPDVVAWNVMISGHGKR--GCETVAIEYFFNMRKSSVK-STRSTLGSVLSAIGIVANLD 344
Query: 236 EGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI 295
G VVH IK G + +G +L+ Y CE + A +V++ LE N++I G
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYA 404
Query: 296 SMGR-----------------IED----------------------AELIFNRLTEANSI 316
G I+D +I + N
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF 464
Query: 317 SYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN 376
N+++ YA G ++D++++FE+M +R+ VTWN++I YVQ+
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERM-----------------CDRDNVTWNTIIGSYVQD 507
Query: 377 NLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG 436
+A L+ M I + + AC+ + L QG+ +H VK + +++ G
Sbjct: 508 ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTG 567
Query: 437 TSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIV 496
+SL+DMYS+CG I DA+ FSS+ +V + AL+ GYS + L EAV+LF+ ML + +
Sbjct: 568 SSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVN 626
Query: 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG---RSGHLHEA 553
P+ TF ++ AC + + G + + G E+ + LLG S + EA
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG--ISLLGMYMNSRGMTEA 684
Query: 554 EEFIKDMPIELDAVVWGALLSA 575
++ V+W ++S
Sbjct: 685 CALFSELSSPKSIVLWTGMMSG 706
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/589 (25%), Positives = 264/589 (44%), Gaps = 96/589 (16%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R G+L AR LF +M VV+WN M+ G+ K ++ M +S+VK +T +
Sbjct: 273 RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
+LS + +L G +H +K G +VGS L+ Y+ C ++E A +VF+ L E N
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
++ W+ M I GYA + + K ++LF M+
Sbjct: 393 DVFWNAM-------------------------------IRGYAHNGES-HKVMELFMDMK 420
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
SG N+ +++TF S++ CA G H ++IK + +G AL++ Y C A
Sbjct: 421 SSGYNI-DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSIS------------ 317
+ A ++++R+ + N++I + +A +F R+ +S
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 318 ---------------------------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
+S+I Y+ G + D++++F +P S++S+
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM- 598
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
N++I+GY QNNL E+A+ L+ M ++ + TF+ + AC
Sbjct: 599 ----------------NALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHK 641
Query: 411 LGSLQQGQLLHAHLVKTPFES-NVYVGTSLVDMYSRCGSINDAQASFSSISSP-NVAAWT 468
SL G H + K F S Y+G SL+ MY + +A A FS +SSP ++ WT
Sbjct: 642 PESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWT 701
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
+M+G+S +G EA+ ++ M ++P+ ATFV VL C + EG I + +
Sbjct: 702 GMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLI--F 759
Query: 529 GVVPTLEHYT--CVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ L+ T ++D+ + G + + + +M + V W +L++
Sbjct: 760 HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 234/546 (42%), Gaps = 96/546 (17%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G L AR +F++M R V+WNT++ Y + E+ L M+ + + ++ L
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
C ++ L GKQ+HCL +K G + GS L+ Y+ C I++A++VF L E
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPE---- 592
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS VV LI+GY++ + E+A+ LF+ M
Sbjct: 593 -WS--------------------------VVSMNALIAGYSQ--NNLEEAVVLFQEMLTR 623
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD-ESIGGALIEFYCGCEAFD 270
G N P+E TF +++ AC + + G HG + K GF + E +G +L+ Y
Sbjct: 624 GVN-PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMT 682
Query: 271 GAMRVYDRLENP-CLNASNSLINGLISMGRIEDA-------------------------- 303
A ++ L +P + +++G G E+A
Sbjct: 683 EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVC 742
Query: 304 -------------ELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
LIF+ + + ++ N++I YA G + S ++F++M RS
Sbjct: 743 SVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS----- 797
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410
N V+WNS+I+GY +N E AL+++ +MR+ I TF + ACS
Sbjct: 798 -----------NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSH 846
Query: 411 LGSLQQGQLLHAHLV-KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWT 468
G + G+ + ++ + E+ V +VD+ R G + +A + + P+ W+
Sbjct: 847 AGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWS 906
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
+L+ HG + E ++E + N++ +V + + G + + + M+
Sbjct: 907 SLLGACRIHGDDIRGEISAEKLIELE-PQNSSAYVLLSNIYASQGCWEKANALRKVMRDR 965
Query: 529 GV--VP 532
GV VP
Sbjct: 966 GVKKVP 971
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 7/230 (3%)
Query: 359 MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ 418
+E++ WNSM+S Y K L+ ++++ + I + TFS++ C+ +++ G+
Sbjct: 121 LEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGR 180
Query: 419 LLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHG 478
+H ++K E N Y G +LVDMY++C I+DA+ F I PN WT L +GY G
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 240
Query: 479 LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT 538
L EAVL+FE M ++ P+ FV V++ +R G + + +F M S P + +
Sbjct: 241 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWN 296
Query: 539 CVVDLLGRSGHLHEAEEFIKDM---PIELDAVVWGALLSACWFWMNMEVG 585
++ G+ G A E+ +M ++ G++LSA N+++G
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 172/427 (40%), Gaps = 90/427 (21%)
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
GK VH + G + + +G A+++ Y C A + +D LE + A NS+++ S
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKD-VTAWNSMLSMYSS 137
Query: 297 MGR----------IEDAELIFNRLT-----------------------------EANSIS 317
+G+ + + ++ N+ T E NS
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 318 YNSMIKGYAVYGQVDDSKRLFE--------------------KMPHRSIISLNTM----- 352
+++ YA ++ D++R+FE +P +++ M
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 353 -------ISVIPEMER-----------------NPVTWNSMISGYVQNNLHEKALQLYMT 388
++VI R + V WN MISG+ + A++ +
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFN 317
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
MRK ++ TRST + A + +L G ++HA +K SN+YVG+SLV MYS+C
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
+ A F ++ N W A++ GY+H+G + + LF M + TF +LS
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 509 CVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
C + + G + + + L +VD+ + G L +A + + M + D V
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVT 496
Query: 569 WGALLSA 575
W ++ +
Sbjct: 497 WNTIIGS 503
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 23/270 (8%)
Query: 353 ISVIPEMERNPVTWNSMISGYV---QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
+S P++ R I G+V + +H++ L++ + KL ++R F + +
Sbjct: 23 LSYSPDLGRR-------IYGHVLPSHDQIHQRLLEICLGQCKLF--KSRKVFDEMPQRLA 73
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+L+ G+ +H+ + +S +G ++VD+Y++C ++ A+ F + +V AW +
Sbjct: 74 L--ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNS 130
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
+++ YS G + + F + E I PN TF VLS C R V G +I SM G
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
+ +VD+ + + +A + + ++ + V W L S ++ + E A
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARR-VFEWIVDPNTVCWTCLFSG---YVKAGLPEEAV 246
Query: 590 ---QKMFGLDKKPIS-AYVILSNIYAVLGK 615
++M +P A+V + N Y LGK
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVINTYIRLGK 276
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 311 bits (798), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 209/688 (30%), Positives = 334/688 (48%), Gaps = 100/688 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST-MHRSNVKLNETTFSTI 90
G + AR+ FD + R V +WN M+ GY + E + S M S + + TF ++
Sbjct: 100 GNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSV 159
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L C ++IDG +IHCL LK G+ +V + L+ Y+ + A+ +FDE
Sbjct: 160 LKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE------ 210
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
MP +D+ W +ISGY +S + E AL L
Sbjct: 211 -------------------------MPVRDMGSWNAMISGYCQSGNAKE-ALTL-----S 239
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+G + T S++ AC G F G +H IK G E + + LI+ Y
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 271 GAMRVYDRLENPCLNASNSLINGL---------------ISMGRIEDAEL-------IFN 308
+V+DR+ L + NS+I + + RI+ L I +
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 309 RLTEANSISY------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
+L + + N+++ YA G VD ++ +F +P+ +IS
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS-- 417
Query: 351 TMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA-IDRTRSTFSVLFHACS 409
WN++ISGY QN +A+++Y M + I + T+ + ACS
Sbjct: 418 ---------------WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 462
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
G+L+QG LH L+K +V+V TSL DMY +CG + DA + F I N W
Sbjct: 463 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNT 522
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKS-Y 528
L+ + HG G +AV+LF+ ML++ + P+ TFV +LSAC +GLV+EG F M++ Y
Sbjct: 523 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDY 582
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERA 588
G+ P+L+HY C+VD+ GR+G L A +FIK M ++ DA +WGALLSAC N+++G+ A
Sbjct: 583 GITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIA 642
Query: 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHA 648
++ +F ++ + + +V+LSN+YA GKW +IR ++K PG S +E++++V
Sbjct: 643 SEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEV 702
Query: 649 FSVEDRNNPNCNVIYATLEHLTANLNSV 676
F ++ +P +Y L L A L +
Sbjct: 703 FYTGNQTHPMYEEMYRELTALQAKLKMI 730
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 201/440 (45%), Gaps = 57/440 (12%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E+ + +NK I G+L + +FD+M +R ++SWN+++ Y + ++SL
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCF 133
M S ++ + T ++ S+ +QL + + + L+ G+ + +G+ ++ YA
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
++ A+ VF+ L + + W+ ++ GY Q +G+A
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQ--------------------------NGFA- 431
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
+A++++ M E GE N+ T+ SV+ AC++ GA +G +HG L+K G D
Sbjct: 432 -----SEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS--NSLINGLISMGRIEDAELIFNRL- 310
+ +L + Y C + A+ ++ ++ P +N+ N+LI G E A ++F +
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLFYQI--PRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Query: 311 ---TEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWN 367
+ + I++ +++ + G VD+ + FE M T + P ++ +
Sbjct: 545 DEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM--------QTDYGITPSLKH----YG 592
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
M+ Y + E AL+ ++ +++ S + L AC G++ G++ HL +
Sbjct: 593 CMVDMYGRAGQLETALKF---IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Query: 428 PFESNVYVGTSLVDMYSRCG 447
E +V L +MY+ G
Sbjct: 650 EPE-HVGYHVLLSNMYASAG 668
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 309 bits (792), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/639 (29%), Positives = 329/639 (51%), Gaps = 62/639 (9%)
Query: 44 MPI-----RTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLN 98
MPI R + + L ++ A+ +++S + ++ + ++L +++L C
Sbjct: 1 MPISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTK 60
Query: 99 SLIDGKQIHCLVLKSGYE-CFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLML 157
SL GK IH + +G++ + + L+ Y C + +A +VFD++H N W+ M+
Sbjct: 61 SLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMV 120
Query: 158 VGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG-CEKALKLFRWMRESGENMP 216
GYV+ ++ A VF MP++DVV W ++ GYA+ DG +AL ++ R SG
Sbjct: 121 SGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQ--DGNLHEALWFYKEFRRSGIKF- 177
Query: 217 NEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVY 276
NE++F ++ AC + + HG ++ GF + + ++I+ Y C
Sbjct: 178 NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC---------- 227
Query: 277 DRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKR 336
G++E A+ F+ +T + + ++I GYA G ++ +++
Sbjct: 228 ---------------------GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEK 266
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
LF +MP E+NPV+W ++I+GYV+ +AL L+ M L +
Sbjct: 267 LFCEMP-----------------EKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKP 309
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+ TFS A + + SL+ G+ +H ++++T N V +SL+DMYS+ GS+ ++ F
Sbjct: 310 EQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF 369
Query: 457 SSISSP-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
+ W +++ + HGLG +A+ + + M++ + PN T V +L+AC +GLV
Sbjct: 370 RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLV 429
Query: 516 NEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
EG++ F SM +G+VP EHY C++DLLGR+G E I++MP E D +W A+L
Sbjct: 430 EEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILG 489
Query: 575 ACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
C N E+G++AA ++ LD + + Y++LS+IYA GKW +R + V K+
Sbjct: 490 VCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKE 549
Query: 635 PGCSWIELNSRVHAFSVEDRNNPNCNV--IYATLEHLTA 671
SWIE+ +V AF+V D ++ + IY L +L A
Sbjct: 550 KAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAA 588
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 171/332 (51%), Gaps = 13/332 (3%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
+ S N ++ ++G LV AR +FD MP R VVSWNTM+ GY++ E+L R
Sbjct: 113 LYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR 172
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
S +K NE +F+ +L+ C + L +Q H VL +G+ + ++ YA C ++E
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
AKR FDE+ + +W+ ++ GY + M A +F +MP+K+ V WT LI+GY + G
Sbjct: 233 AKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSG 292
Query: 198 CEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+AL LFR M G P ++TF S + A A + + GK +HG +I+ + +
Sbjct: 293 -NRALDLFRKMIALGVK-PEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVIS 350
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENP--CLNASNSLINGLISMG------RIEDAELIFNR 309
+LI+ Y + + + RV+ ++ C+ N++I+ L G R+ D + F
Sbjct: 351 SLIDMYSKSGSLEASERVFRICDDKHDCV-FWNTMISALAQHGLGHKALRMLDDMIKFR- 408
Query: 310 LTEANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ N + ++ + G V++ R FE M
Sbjct: 409 -VQPNRTTLVVILNACSHSGLVEEGLRWFESM 439
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 309 bits (792), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 197/687 (28%), Positives = 342/687 (49%), Gaps = 70/687 (10%)
Query: 28 CGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTF 87
C + V AR +F +M R++ WNT+L S+ +++E L S M R K + T
Sbjct: 4 CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTL 63
Query: 88 STILSVCAQLNSLIDGKQIHCLVLKS---GYECFEFVGSGLLFFYANCFEIEEAKRVFDE 144
L C +L + G+ IH V K G + + VGS L++ Y
Sbjct: 64 PVALKACGELREVNYGEMIHGFVKKDVTLGSDLY--VGSSLIYMY--------------- 106
Query: 145 LHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKL 204
++C M +A +F ++ K D+V W+ ++SG+ K+ +A++
Sbjct: 107 ----------------IKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKN-GSPYQAVEF 149
Query: 205 FRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYC 264
FR M + + P+ T +++ AC +L G+ VHG +I+ GF D S+ +L+ Y
Sbjct: 150 FRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYA 209
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----TEANSISYNS 320
AF A+ ++ + + + +++I + G +A L+FN + TE N +
Sbjct: 210 KSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLC 269
Query: 321 MIKGYAVYGQVDDSKRLFEKMPHRSI---ISLNTMI-----------------SVIPEME 360
+++ A ++ ++ E + + + ++T + S IP
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPR-- 327
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSV-LFHACSCLGSLQQGQL 419
++ V+W ++ISG+ N + ++++ + M R + V + +CS LG L+Q +
Sbjct: 328 KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKC 387
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
H++++K F+SN ++G SLV++YSRCGS+ +A F+ I+ + WT+L+ GY HG
Sbjct: 388 FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGK 447
Query: 480 GSEAVLLFEIMLEQ-DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHY 537
G++A+ F M++ ++ PN TF+ +LSAC AGL++EG++IF+ M Y + P LEHY
Sbjct: 448 GTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHY 507
Query: 538 TCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597
+VDLLGR G L A E K MP + G LL AC N E+ E A+K+F L+
Sbjct: 508 AVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELES 567
Query: 598 KPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNP 657
Y+++SN+Y V G+W +R + +KK S IE+ +VH F +D +P
Sbjct: 568 NHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHP 627
Query: 658 NCNVIYATLE----HLTANLNSVVLFD 680
+Y L+ H+ +L + V F+
Sbjct: 628 EKEPVYGLLKELDLHMKEDLENCVYFE 654
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 188/656 (28%), Positives = 319/656 (48%), Gaps = 102/656 (15%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL---VSTMHRSNVKLNETTFS 88
L AR +FD++P +WNT++ Y+ D LS+ + + S N+ TF
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFP 135
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
++ A+++SL G+ +H + +KS FV + L+ Y +C +++ A +VF + E
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 195
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+ + W+ M+ G+VQ A ++F KM +DV
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKA------------------------- 230
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEA 268
+ T V+ ACA++ G+ V + + + ++ A+++ Y C +
Sbjct: 231 --------SHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVY 328
+ A R++D +E E +++++ +M+ GYA+
Sbjct: 283 IEDAKRLFDAME-------------------------------EKDNVTWTTMLDGYAIS 311
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNN--------LHE 380
+ ++ + MP + I V WN++IS Y QN HE
Sbjct: 312 EDYEAAREVLNSMPQKDI-----------------VAWNALISAYEQNGKPNEALIVFHE 354
Query: 381 KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLV 440
LQ M + ++ + T S AC+ +G+L+ G+ +H+++ K N +V ++L+
Sbjct: 355 LQLQKNMKLNQITLVSTLS-------ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407
Query: 441 DMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAA 500
MYS+CG + ++ F+S+ +V W+A++ G + HG G+EAV +F M E ++ PN
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 501 TFVGVLSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKD 559
TF V AC GLV+E +F M+S YG+VP +HY C+VD+LGRSG+L +A +FI+
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEA 527
Query: 560 MPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKK 619
MPI VWGALL AC N+ + E A ++ L+ + A+V+LSNIYA LGKW
Sbjct: 528 MPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENV 587
Query: 620 MDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
++RK + +KK+PGCS IE++ +H F D +P +Y L + L S
Sbjct: 588 SELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKS 643
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 12/133 (9%)
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM--YSRCGSINDA 452
+ RS L C L L+Q H H+++T S+ Y + L M S S+ A
Sbjct: 27 NNERSRHISLIERCVSLRQLKQ---THGHMIRTGTFSDPYSASKLFAMAALSSFASLEYA 83
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVL----LFEIMLEQDIVPNAATFVGVLSA 508
+ F I PN AW L+ Y+ G + VL +++ E PN TF ++ A
Sbjct: 84 RKVFDEIPKPNSFAWNTLIRAYAS---GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKA 140
Query: 509 CVRAGLVNEGMKI 521
++ G +
Sbjct: 141 AAEVSSLSLGQSL 153
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 206/700 (29%), Positives = 349/700 (49%), Gaps = 102/700 (14%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
++ ++G L AR +F+QM R V+ N ++ G + +E+ L M+ S + ++
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSP 308
Query: 85 TTFSTILSV-----CAQLNSLIDGKQIHCLVLKSGYECFEF-VGSGLLFFYANCFEIEEA 138
++ +LS A+ L G+++H V+ +G F +G+GL+ YA C I
Sbjct: 309 ESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSI--- 365
Query: 139 KRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
+DA VF M KD V W +I+G + +GC
Sbjct: 366 ----------------------------ADARRVFYFMTDKDSVSWNSMITGLDQ--NGC 395
Query: 199 E-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGG 257
+A++ ++ MR + +P +T S + +CA L G+ +HG +K G + + S+
Sbjct: 396 FIEAVERYKSMRRH-DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSN 454
Query: 258 ALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGR-IEDAELIF--------- 307
AL+ Y + +++ + + NS+I L R + +A + F
Sbjct: 455 ALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQK 514
Query: 308 -NRLT-----------------------------EANSISYNSMIKGYAVYGQVDDSKRL 337
NR+T + + N++I Y G++D +++
Sbjct: 515 LNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKI 574
Query: 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
F +M R R+ VTWNSMISGY+ N L KAL L M +
Sbjct: 575 FSRMAER----------------RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLD 618
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
++ + A + + +L++G +HA V+ ES+V VG++LVDMYS+CG ++ A F+
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIM-LEQDIVPNAATFVGVLSACVRAGLVN 516
++ N +W ++++GY+ HG G EA+ LFE M L+ P+ TFVGVLSAC AGL+
Sbjct: 679 TMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLE 738
Query: 517 EGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
EG K F SM SYG+ P +EH++C+ D+LGR+G L + E+FI+ MP++ + ++W +L A
Sbjct: 739 EGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
Query: 576 CWF--WMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
C E+G++AA+ +F L+ + YV+L N+YA G+W + RK++ +VKK
Sbjct: 799 CCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKK 858
Query: 634 DPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+ G SW+ + VH F D+++P+ +VIY L+ L +
Sbjct: 859 EAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM 898
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 224/490 (45%), Gaps = 46/490 (9%)
Query: 126 LFFYANCFEIEEAKRVFDELHEDNEL-----LWSLMLVGYVQCNLMSDAFDVFIKMPKKD 180
L F +C A R F N L L + ++ Y++ A VF +MP ++
Sbjct: 7 LSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN 66
Query: 181 VVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGA--FCEGK 238
V W ++SGY+++ + E AL R M + G N+Y F SV+RAC +G+ G+
Sbjct: 67 CVSWACIVSGYSRNGEHKE-ALVFLRDMVKEG-IFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG-AMRVYDRLENPCLNASNSLINGLISM 297
+HGL+ K + D + LI Y C G A+ + +E + NS+I+
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 298 GRIEDAELIFNRL----TEANSISYNSMIKGYAVYGQVDDSKRLFEKMP---HRSII--- 347
G A IF+ + + ++ S++ + D RL E++ +S +
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPD--VRLLEQIMCTIQKSGLLTD 242
Query: 348 ---------------SLNTMISVIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
SL+ V +ME RN VT N ++ G V+ E+A +L+M M
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 392 LAIDRTRSTFSVLF-----HACSCLGSLQQGQLLHAHLVKTPF-ESNVYVGTSLVDMYSR 445
+ ID + ++ +L ++ + L++G+ +H H++ T + V +G LV+MY++
Sbjct: 303 M-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 446 CGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
CGSI DA+ F ++ + +W +++ G +G EAV ++ M DI+P + T +
Sbjct: 362 CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 506 LSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD 565
LS+C G +I G+ + ++ L +G+L+E + MP E D
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHD 480
Query: 566 AVVWGALLSA 575
V W +++ A
Sbjct: 481 QVSWNSIIGA 490
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 138/609 (22%), Positives = 249/609 (40%), Gaps = 81/609 (13%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G V+AR +FD+MP+R VSW ++ GYS+ + E+L + M + + N+ F ++L
Sbjct: 50 GDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVL 109
Query: 92 SVCAQLNS--LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
C ++ S ++ G+QIH L+ K Y V + L+ Y C
Sbjct: 110 RACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC----------------- 152
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ VGY C F + K+ V W +IS Y+++ D A ++F M+
Sbjct: 153 -----IGSVGYALC--------AFGDIEVKNSVSWNSIISVYSQAGDQ-RSAFRIFSSMQ 198
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKV-----VHGLLIKCGFEFDESIGGALIEFYC 264
G P EYTF S++ L E V + + K G D +G L+ +
Sbjct: 199 YDGSR-PTEYTFGSLVTTACSL---TEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFA 254
Query: 265 GCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIF---NRLTEANSISYNSM 321
+ A +V++++E N L+ GL+ E+A +F N + + + SY +
Sbjct: 255 KSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL 314
Query: 322 IKGYAVYGQVDDSKRLFEKMPHRSIISL----------NTMISVIPE------------- 358
+ + Y ++ + H +I+ N ++++ +
Sbjct: 315 LSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYF 374
Query: 359 -MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQG 417
+++ V+WNSMI+G QN +A++ Y +MR+ I T +C+ L + G
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG 434
Query: 418 QLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHH 477
Q +H +K + NV V +L+ +Y+ G +N+ + FSS+ + +W +++ +
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARS 494
Query: 478 GLG-SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEH 536
EAV+ F N TF VLSA G +I +
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT 554
Query: 537 YTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC-----------WFWMNMEVG 585
++ G+ G + E+ M D V W +++S W ++ G
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTG 614
Query: 586 ERAAQKMFG 594
+R M+
Sbjct: 615 QRLDSFMYA 623
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 124/587 (21%), Positives = 240/587 (40%), Gaps = 107/587 (18%)
Query: 41 FDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNS- 99
F + ++ VSWN+++ YS+ + + S+M + E TF ++++ L
Sbjct: 163 FGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEP 222
Query: 100 ---LIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
L++ QI C + KSG FVGSGL+ +A + A++VF+++ N + + +
Sbjct: 223 DVRLLE--QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGL 280
Query: 157 LVGYVQCNLMSDAFDVFIKM-------PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+VG V+ +A +F+ M P+ V+ L+S + + E LK
Sbjct: 281 MVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI----LLSSFPEYSLAEEVGLK------ 330
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGF-EFDESIGGALIEFYCGCEA 268
+G+ VHG +I G +F IG L+ Y C +
Sbjct: 331 --------------------------KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMG-RIEDAE---------------LIFNRLTE 312
A RV+ + + + NS+I GL G IE E + + L+
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 313 ANSISY-----------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
S+ + N+++ YA G +++ +++F MP +S
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 484
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
N++I + ER+ +A+ ++ ++ R TFS + A S
Sbjct: 485 NSIIGALARSERSL----------------PEAVVCFLNAQRAGQKLNRITFSSVLSAVS 528
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS-PNVAAWT 468
L + G+ +H +K +L+ Y +CG ++ + FS ++ + W
Sbjct: 529 SLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWN 588
Query: 469 ALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSY 528
++++GY H+ L ++A+ L ML+ ++ + VLSA + GM++
Sbjct: 589 SMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRA 648
Query: 529 GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + + +VD+ + G L A F MP+ ++ W +++S
Sbjct: 649 CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISG 694
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 139/323 (43%), Gaps = 66/323 (20%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK-FDESLSLVSTMHRSN 79
+N +T G L R +F MP VSWN+++ ++ + E++ R+
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG 512
Query: 80 VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAK 139
KLN TFS++LS + L+ GKQIH L LK+ + L+ Y C E++ +
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCE 572
Query: 140 RVFDELHEDNE-LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGC 198
++F + E + + W+ M+ GY+ L++ A D +VW
Sbjct: 573 KIFSRMAERRDNVTWNSMISGYIHNELLAKALD----------LVW-------------- 608
Query: 199 EKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGA 258
+M ++G+ + + + + +V+ A A + G VH ++ E D +G A
Sbjct: 609 --------FMLQTGQRL-DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659
Query: 259 LIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISY 318
L++ Y C D A+R FN + NS S+
Sbjct: 660 LVDMYSKCGRLDYALR-------------------------------FFNTMPVRNSYSW 688
Query: 319 NSMIKGYAVYGQVDDSKRLFEKM 341
NSMI GYA +GQ +++ +LFE M
Sbjct: 689 NSMISGYARHGQGEEALKLFETM 711
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 19 VSTNKAITEC-GRNGQLVTARNLFDQMP-IRTVVSWNTMLCGYSKWAKFDESLSLVSTMH 76
+T A+ C G+ G++ +F +M R V+WN+M+ GY ++L LV M
Sbjct: 552 ATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFML 611
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
++ +L+ ++T+LS A + +L G ++H +++ E VGS L+ Y+ C ++
Sbjct: 612 QTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLD 671
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A R F+ + N W+ M ISGYA+
Sbjct: 672 YALRFFNTMPVRNSYSWNSM-------------------------------ISGYARHGQ 700
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
G E+ALKLF M+ G+ P+ TF V+ AC+ G EG
Sbjct: 701 G-EEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 740
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 36/303 (11%)
Query: 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL 378
N++I Y G ++++F++MP R N V+W ++SGY +N
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLR-----------------NCVSWACIVSGYSRNGE 82
Query: 379 HEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQ--GQLLHAHLVKTPFESNVYVG 436
H++AL M K I + F + AC +GS+ G+ +H + K + + V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 437 TSLVDMYSRC-GSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI 495
L+ MY +C GS+ A +F I N +W ++++ YS G A +F M
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 496 VPNAATFVG-VLSACVRAGLVNEGMKIFR----SMKSYGVVPTLEHYTCVVDLLGRSGHL 550
P TF V +AC L +++ +++ G++ L + +V +SG L
Sbjct: 203 RPTEYTFGSLVTTAC---SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 551 HEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGL----DKKPISAYVIL 606
A + M +AV L+ + + GE A + + D P S ++L
Sbjct: 260 SYARKVFNQMETR-NAVTLNGLMVGL---VRQKWGEEATKLFMDMNSMIDVSPESYVILL 315
Query: 607 SNI 609
S+
Sbjct: 316 SSF 318
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 306 bits (785), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 180/509 (35%), Positives = 271/509 (53%), Gaps = 40/509 (7%)
Query: 169 AFDVFIKMPKKDVVVWTKLISGYAKS-VDGCEKALKLFRWMRESGENMPNEYTFDSVIRA 227
A +F +MP+++ W +I G+++S D A+ LF M PN +TF SV++A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 228 CARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNAS 287
CA+ G EGK +HGL +K GF DE + L+ Y C F RV L
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMC-GFMKDARV--------LFYK 188
Query: 288 NSLINGLISMG--RIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRS 345
N + ++ M R D E++ +N MI GY G ++ LF+KM RS
Sbjct: 189 NIIEKDMVVMTDRRKRDGEIVL----------WNVMIDGYMRLGDCKAARMLFDKMRQRS 238
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
++S WN+MISGY N + A++++ M+K I T +
Sbjct: 239 VVS-----------------WNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
A S LGSL+ G+ LH + + + +G++L+DMYS+CG I A F + NV
Sbjct: 282 PAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVI 341
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
W+A++NG++ HG +A+ F M + + P+ ++ +L+AC GLV EG + F M
Sbjct: 342 TWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQM 401
Query: 526 KSY-GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
S G+ P +EHY C+VDLLGRSG L EAEEFI +MPI+ D V+W ALL AC N+E+
Sbjct: 402 VSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEM 461
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
G+R A + + AYV LSN+YA G W + ++R R+ +++KDPGCS I+++
Sbjct: 462 GKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDG 521
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHLTANL 673
+H F VED ++P I + L ++ L
Sbjct: 522 VLHEFVVEDDSHPKAKEINSMLVEISDKL 550
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 223/438 (50%), Gaps = 49/438 (11%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST------MHRSNVKLNETTFSTI 90
A +F+QMP R SWNT++ G+S+ DE +L++ M V+ N TF ++
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSE---SDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF-------- 142
L CA+ + +GKQIH L LK G+ EFV S L+ Y C +++A+ +F
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 143 -----DELHEDNEL-LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
D D E+ LW++M+ GY++ A +F KM ++ VV W +ISGY S++
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY--SLN 252
Query: 197 GCEK-ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
G K A+++FR M++ G+ PN T SV+ A +RLG+ G+ +H G D+ +
Sbjct: 253 GFFKDAVEVFREMKK-GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVL 311
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-- 313
G ALI+ Y C + A+ V++RL + +++ING G+ DA F ++ +A
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 314 --NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMIS 371
+ ++Y +++ + G V++ +R F +M +S++ + P +E + M+
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEGRRYFSQM-----VSVD---GLEPRIEH----YGCMVD 419
Query: 372 GYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFE 430
++ L ++A + + M I + L AC G+++ G+ + L+ P +
Sbjct: 420 LLGRSGLLDEAEEFILNM---PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHD 476
Query: 431 SNVYVGTSLVDMYSRCGS 448
S YV +L +MY+ G+
Sbjct: 477 SGAYV--ALSNMYASQGN 492
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHR 77
IV N I R G AR LFD+M R+VVSWNTM+ GYS F +++ + M +
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+++ N T ++L ++L SL G+ +H SG + +GS L+ Y+ C IE+
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV 181
A VF+ L +N + WS M+ G+ DA D F KM + V
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 305 bits (781), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 203/663 (30%), Positives = 340/663 (51%), Gaps = 63/663 (9%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSN-- 79
N ++ G +G + A LFD MP R +VSWN+M+ +S +ES L+ M N
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 80 --VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+ T T+L VCA+ + GK +H +K
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK------------------------- 320
Query: 138 AKRVFDELHEDNELLWSLMLVG-YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
L D EL+ + L+ Y +C +++A +F K+VV W ++ G++ D
Sbjct: 321 -------LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 197 GCEKALKLFRWMRESGENM-PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+ R M GE++ +E T + + C K +H +K F ++E +
Sbjct: 374 -THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 432
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLING----------LISMGRIEDAEL 305
A + Y C + A RV+ + + +N+ N+LI G L + +++ + L
Sbjct: 433 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 492
Query: 306 IFNRLTEANSISYNSMIK----GYAVYGQVDDSKRLFEKMPHRSIISLN-------TMIS 354
+ + T + +S S +K G V+G + + + + S++SL T+ +
Sbjct: 493 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQA 552
Query: 355 VIPEME-RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS 413
+ ME ++ V+WN++I+GY+QN ++AL ++ M I + +F ACS L S
Sbjct: 553 LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 612
Query: 414 LQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNG 473
L+ G+ HA+ +K E + ++ SL+DMY++ GSI + F+ + + A+W A++ G
Sbjct: 613 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
Query: 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVP 532
Y HGL EA+ LFE M P+ TF+GVL+AC +GL++EG++ MK S+G+ P
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 732
Query: 533 TLEHYTCVVDLLGRSGHLHEAEEFI-KDMPIELDAVVWGALLSACWFWMNMEVGERAAQK 591
L+HY CV+D+LGR+G L +A + ++M E D +W +LLS+C N+E+GE+ A K
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 792
Query: 592 MFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSV 651
+F L+ + YV+LSN+YA LGKW +R+R+ + ++KD GCSWIELN +V +F V
Sbjct: 793 LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVV 852
Query: 652 EDR 654
+R
Sbjct: 853 GER 855
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/606 (20%), Positives = 248/606 (40%), Gaps = 107/606 (17%)
Query: 19 VSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESL-SLVSTMHR 77
V + IT G +R +FD + + + WN ++ YS+ +DE L + + +
Sbjct: 121 VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIST 180
Query: 78 SNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEE 137
+++ + T+ ++ CA ++ + G +H LV+K+G FVG+ L+ FY + +
Sbjct: 181 TDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD 240
Query: 138 AKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDG 197
A ++FD MP++++V W +I ++ +
Sbjct: 241 ALQLFD-------------------------------IMPERNLVSWNSMIRVFSDNGFS 269
Query: 198 CEKALKLFRWMRESGEN--MPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
E L L M E+G+ MP+ T +V+ CAR GK VHG +K + + +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-- 313
AL++ Y C A ++ N + + N+++ G + G D F+ L +
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVLRQMLA 386
Query: 314 ------------------------------------------NSISYNSMIKGYAVYGQV 331
N + N+ + YA G +
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 332 DDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK 391
++R+F + +++ S WN++I G+ Q+N +L ++ M+
Sbjct: 447 SYAQRVFHGIRSKTVNS-----------------WNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 392 LAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIND 451
+ T L ACS L SL+ G+ +H +++ E +++V S++ +Y CG +
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 549
Query: 452 AQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR 511
QA F ++ ++ +W ++ GY +G A+ +F M+ I + + V AC
Sbjct: 550 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS- 608
Query: 512 AGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAV 567
+ +++ R +Y + LE + +D+ ++G + ++ + + E
Sbjct: 609 ---LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTA 664
Query: 568 VWGALL 573
W A++
Sbjct: 665 SWNAMI 670
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 180/400 (45%), Gaps = 45/400 (11%)
Query: 148 DNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRW 207
++++L + ++ Y C D+ VF + K++ W +IS Y+++ + ++ L+ F
Sbjct: 118 NDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRN-ELYDEVLETFIE 176
Query: 208 MRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCE 267
M + + +P+ +T+ VI+ACA + G VHGL++K G D +G AL+ FY G
Sbjct: 177 MISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY-GTH 235
Query: 268 AF-DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANS----------- 315
F A++++D + L + NS+I G E++ L+ + E N
Sbjct: 236 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 295
Query: 316 ------------ISYNSMIKGYAVYGQVDDSKRLFEK-MPHRSIISLNTMISVIPEM--E 360
I + G+AV ++D L M S T +I +M
Sbjct: 296 VTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNN 355
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL------FHACSCLGSL 414
+N V+WN+M+ G+ + M D ++L FH S L SL
Sbjct: 356 KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHE-SFLPSL 414
Query: 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGY 474
++ LH + +K F N V + V Y++CGS++ AQ F I S V +W AL+ G
Sbjct: 415 KE---LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG- 470
Query: 475 SHHGLGSEAVLLFEIMLEQDI---VPNAATFVGVLSACVR 511
H ++ L + L+ I +P++ T +LSAC +
Sbjct: 471 --HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 116/525 (22%), Positives = 214/525 (40%), Gaps = 100/525 (19%)
Query: 18 IVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTM-- 75
+V N + + G + A+ +F + VVSWNTM+ G+S + ++ M
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 76 HRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEI 135
+VK +E T + VC + L K++HC LK + E V + + YA C +
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 136 EEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSV 195
A+RVF + W+ ++ G+ Q N + D ++M ISG
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK----------ISGL---- 492
Query: 196 DGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESI 255
+P+ +T S++ AC++L + GK VHG +I+ E D +
Sbjct: 493 -------------------LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 256 GGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNR------ 309
+++ Y C ++D +E+ L + N++I G + G + A +F +
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 593
Query: 310 ---------------------------------LTEANSISYNSMIKGYAVYGQVDDSKR 336
L E ++ S+I YA G + S +
Sbjct: 594 QLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653
Query: 337 LFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDR 396
+F + E++ +WN+MI GY + L ++A++L+ M++ +
Sbjct: 654 VFNGLK-----------------EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP 696
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF--ESNVYVGTSLVDMYSRCGSINDAQA 454
TF + AC+ G + +G L + +K+ F + N+ ++DM R G ++ A
Sbjct: 697 DDLTFLGVLTACNHSGLIHEG-LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 755
Query: 455 SFSSISS--PNVAAWTALMNGYSHHG---LGSE-AVLLFEIMLEQ 493
+ S +V W +L++ H +G + A LFE+ E+
Sbjct: 756 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK 800
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 305 bits (780), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 276/518 (53%), Gaps = 27/518 (5%)
Query: 177 PKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCE 236
P ++VV WT LISG A++ ++ F RE +PN++TF +A A L
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREG--VVPNDFTFPCAFKAVASLRLPVT 126
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
GK +H L +KCG D +G + + YC D A +++D + L N+ I+ ++
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 297 MGRIEDAE---LIFNRLT-EANSISYNSMIK----------GYAVYGQVDDSKRLFEKMP 342
GR +A + F R+ NSI++ + + G ++G V S +
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 343 HRSIISLNTMISVIPEME--------RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
+I I E +N V+W S+++ YVQN+ EKA LY+ RK +
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
+ + S + AC+ + L+ G+ +HAH VK E ++VG++LVDMY +CG I D++
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI--VPNAATFVGVLSACVRA 512
+F + N+ +L+ GY+H G A+ LFE M + PN TFV +LSAC RA
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 513 GLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
G V GMKIF SM+S YG+ P EHY+C+VD+LGR+G + A EFIK MPI+ VWGA
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 486
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
L +AC ++G AA+ +F LD K +V+LSN +A G+W + +R+ L + +
Sbjct: 487 LQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 546
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
KK G SWI + ++VHAF +DR++ I TL L
Sbjct: 547 KKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKL 584
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 126/539 (23%), Positives = 207/539 (38%), Gaps = 96/539 (17%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+AR + P R VVSW +++ G ++ F +L M R V N+ TF A
Sbjct: 60 SARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVA 119
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
L + GKQIH L +K G FVG Y ++A+++FDE+ E N W+
Sbjct: 120 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
+ V +A + FI+ + +DG
Sbjct: 180 FISNSVTDGRPREAIEAFIEF----------------RRIDG-----------------H 206
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF------ 269
PN TF + + AC+ G +HGL+++ GF+ D S+ LI+FY C+
Sbjct: 207 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEII 266
Query: 270 -------------------------DGAMRVYDRLENPCLNASNSLINGLIS-------- 296
+ A +Y R + S+ +I+ ++S
Sbjct: 267 FTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGL 326
Query: 297 -MGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISV 355
+GR A + E ++++ Y G ++DS++ F++MP
Sbjct: 327 ELGRSIHAHAV-KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP------------- 372
Query: 356 IPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS--TFSVLFHACSCLGS 413
E+N VT NS+I GY + AL L+ M T + TF L ACS G+
Sbjct: 373 ----EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 414 LQQGQLLHAHLVKT-PFESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALM 471
++ G + + T E + +VDM R G + A + P ++ W AL
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 472 NGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGV 530
N HG +L E + + D ++ V + + AG E + +K G+
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLD-PKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 546
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 18/275 (6%)
Query: 314 NSISYNSMIKGYAVYGQVD---DSK----------RLFEKMPHRSIISLNTMISVIPEME 360
N+IS +SM G V+ ++ DS ++ K+ H S ++ + P
Sbjct: 15 NAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPE--SARLVLRLTPA-- 70
Query: 361 RNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLL 420
RN V+W S+ISG QN AL + MR+ + TF F A + L G+ +
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 421 HAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLG 480
HA VK +V+VG S DMY + +DA+ F I N+ W A ++ G
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 481 SEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540
EA+ F D PN+ TF L+AC +N GM++ + G + +
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 541 VDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+D G+ + +E +M + +AV W +L++A
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAA 284
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 35/225 (15%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
+T + N I G+ Q+ ++ +F +M + VSW +++ Y + + DE S++
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE-DEKASVLYL 299
Query: 75 MHRSN-VKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
R + V+ ++ S++LS CA + L G+ IH +K+ E FVGS L+ Y C
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 359
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
IE++++ FDE MP+K++V LI GYA
Sbjct: 360 CIEDSEQAFDE-------------------------------MPEKNLVTRNSLIGGYAH 388
Query: 194 SVDGCEKALKLFRWMRESG-ENMPNEYTFDSVIRACARLGAFCEG 237
+ AL LF M G PN TF S++ AC+R GA G
Sbjct: 389 Q-GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 305 bits (780), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 191/634 (30%), Positives = 314/634 (49%), Gaps = 99/634 (15%)
Query: 41 FDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSL 100
F + V++W +++ ++ + F ++L+ M S + F ++L C + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 101 IDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE---EAKRVFDEL--------HEDN 149
G+ +H +++ G +C + G+ L+ YA + VFDE+ ED
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ +M G + VF MP+KDVV + +I+GYA+S E AL++ R M
Sbjct: 182 KAETCIMPFG------IDSVRRVFEVMPRKDVVSYNTIIAGYAQS-GMYEDALRMVREMG 234
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
+ + P+ +T SV+ + +GK +HG +I+ G + D IG +L++ Y
Sbjct: 235 TT-DLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYA----- 288
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
RIED+E +F+RL + IS+NS++ GY G
Sbjct: 289 --------------------------KSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
+ +++ RLF +M V +++ V ++S+I
Sbjct: 323 RYNEALRLFRQM-------------VTAKVKPGAVAFSSVIP------------------ 351
Query: 390 RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
AC+ L +L G+ LH ++++ F SN+++ ++LVDMYS+CG+I
Sbjct: 352 -----------------ACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNI 394
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
A+ F ++ + +WTA++ G++ HG G EAV LFE M Q + PN FV VL+AC
Sbjct: 395 KAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Query: 510 VRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
GLV+E F SM K YG+ LEHY V DLLGR+G L EA FI M +E V
Sbjct: 455 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W LLS+C N+E+ E+ A+K+F +D + + AYV++ N+YA G+W + +R R+
Sbjct: 515 WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVI 662
++K P CSWIE+ ++ H F DR++P+ + I
Sbjct: 575 KGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKI 608
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 197/432 (45%), Gaps = 85/432 (19%)
Query: 36 TARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCA 95
+ R +F+ MP + VVS+NT++ GY++ ++++L +V M +++K + T S++L + +
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS 253
Query: 96 QLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSL 155
+ +I GK+IH V++ G + ++GS L+ YA IE+++RVF L+ + + W+
Sbjct: 254 EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNS 313
Query: 156 MLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENM 215
++ GYVQ ++ AL+LFR M + +
Sbjct: 314 LVAGYVQNGRYNE--------------------------------ALRLFRQM-VTAKVK 340
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
P F SVI ACA L GK +HG +++ GF + I AL++ Y C
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC--------- 391
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
G I+ A IF+R+ + +S+ ++I G+A++G ++
Sbjct: 392 ----------------------GNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429
Query: 336 RLFEKMPHRSI-------ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHE-------- 380
LFE+M + + +++ T S + ++ +NSM Y N E
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 489
Query: 381 -----KALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYV 435
K + Y + K+ ++ T S +S L +CS +L+ + + A + T N+
Sbjct: 490 LGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV-AEKIFTVDSENMGA 548
Query: 436 GTSLVDMYSRCG 447
+ +MY+ G
Sbjct: 549 YVLMCNMYASNG 560
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 102/204 (50%), Gaps = 33/204 (16%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
++ ++ + +F ++ R +SWN+++ GY + +++E+L L M + VK FS
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+++ CA L +L GKQ+H VL+ G+ F+ S L+ Y+ C I+ A+++FD ++
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
+E+ W+ +++G+ + G+ +A+ LF M
Sbjct: 408 DEVSWTAIIMGHA--------------------------LHGHG------HEAVSLFEEM 435
Query: 209 RESGENMPNEYTFDSVIRACARLG 232
+ G PN+ F +V+ AC+ +G
Sbjct: 436 KRQGVK-PNQVAFVAVLTACSHVG 458
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD+M + VSW ++ G++ E++SL M R VK N+ F +L
Sbjct: 392 GNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 451
Query: 92 SVCAQLNSLID 102
+ C+ + L+D
Sbjct: 452 TACSHVG-LVD 461
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 305 bits (780), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 191/664 (28%), Positives = 339/664 (51%), Gaps = 60/664 (9%)
Query: 37 ARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQ 96
R +FD+M R VV+W T++ GY++ + DE L+L M + N TF+ L V A+
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE 206
Query: 97 LNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLM 156
G Q+H +V+K+G + V + L+ Y C + +A+ +FD
Sbjct: 207 EGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFD------------- 253
Query: 157 LVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRESGENM 215
K K VV W +ISGYA +G + +AL +F MR + +
Sbjct: 254 ------------------KTEVKSVVTWNSMISGYA--ANGLDLEALGMFYSMRLNYVRL 293
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+E +F SVI+ CA L + +H ++K GF FD++I AL+ Y C A A+R+
Sbjct: 294 -SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 276 YDRLENPCLN---ASNSLINGLISMGRIEDAELIFNRL----TEANSISYNSMIKGYAVY 328
+ E C+ + ++I+G + E+A +F+ + N +Y+ ++ V
Sbjct: 353 FK--EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEM--------------ERNPVTWNSMISGYV 374
+ ++ + RS ++ ++ +++ V W++M++GY
Sbjct: 411 SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL-GSLQQGQLLHAHLVKTPFESNV 433
Q E A++++ + K I TFS + + C+ S+ QG+ H +K+ +S++
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL 530
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
V ++L+ MY++ G+I A+ F ++ +W ++++GY+ HG +A+ +F+ M ++
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHE 552
+ + TF+GV +AC AGLV EG K F M + + PT EH +C+VDL R+G L +
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 553 AEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612
A + I++MP + +W +L+AC E+G AA+K+ + + +AYV+LSN+YA
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAE 710
Query: 613 LGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTAN 672
G W ++ +RK + VKK+PG SWIE+ ++ ++F DR++P + IY LE L+
Sbjct: 711 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTR 770
Query: 673 LNSV 676
L +
Sbjct: 771 LKDL 774
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 153/575 (26%), Positives = 272/575 (47%), Gaps = 74/575 (12%)
Query: 31 NGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTI 90
+ +L A NLFD+ P R S+ ++L G+S+ + E+ L +HR ++++ + FS++
Sbjct: 40 SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSV 99
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
L V A L + G+Q+HC +K G+ VG+ L+ Y ++ ++VFDE+ E
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE--- 156
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
++VV WT LISGYA++ ++ L LF M+
Sbjct: 157 ----------------------------RNVVTWTTLISGYARNSMN-DEVLTLFMRMQN 187
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
G PN +TF + + A G G VH +++K G + + +LI Y C
Sbjct: 188 EG-TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR 246
Query: 271 GAMRVYDRLENPCLNASNSLING-------LISMGRIEDAELIFNRLTEANSISYNSMIK 323
A ++D+ E + NS+I+G L ++G L + RL+E+ S+ S+IK
Sbjct: 247 KARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSES---SFASVIK 303
Query: 324 GYAVYGQVDDSKR----------LFEKMPHRSIISLNTMISVIPEMER---------NPV 364
A ++ +++ LF++ +++ + + + + R N V
Sbjct: 304 LCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVV 363
Query: 365 TWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHL 424
+W +MISG++QN+ E+A+ L+ M++ + T+SV+ A + + +HA +
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQV 419
Query: 425 VKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAV 484
VKT +E + VGT+L+D Y + G + +A FS I ++ AW+A++ GY+ G A+
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 485 LLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544
+F + + I PN TF +L+ C N M + + + L+ CV L
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVC---AATNASMGQGKQFHGFAIKSRLDSSLCVSSAL 536
Query: 545 ----GRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ G++ AEE K E D V W +++S
Sbjct: 537 LTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISG 570
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 219/460 (47%), Gaps = 70/460 (15%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR LFD+ +++VV+WN+M+ GY+ E+L + +M + V+L+E++F++++
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELH-EDNE 150
+CA L L +Q+HC V+K G+ + + + L+ Y+ C + +A R+F E+ N
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNV 362
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+ W+ M+ G++Q + +A D+F +M +K V
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGV----------------------------- 393
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
PNE+T+ ++ A + VH ++K +E ++G AL++ Y +
Sbjct: 394 ----RPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIK--- 323
A +V+ +++ + A ++++ G G E A +F LT+ N +++S++
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Query: 324 -------------GYAVYGQVDD----SKRLFEKMPHRSIISLNTMISVIPEMERNPVTW 366
G+A+ ++D S L + I + + E++ V+W
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV-FKRQREKDLVSW 564
Query: 367 NSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426
NSMISGY Q+ KAL ++ M+K + TF +F AC+ G +++G+ +V+
Sbjct: 565 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR 624
Query: 427 ----TPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSP 462
P + + + +VD+YSR G + A ++ +P
Sbjct: 625 DCKIAPTKEH---NSCMVDLYSRAGQLEKAMKVIENMPNP 661
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 90/191 (47%), Gaps = 6/191 (3%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
+T + G + +A +F + + +VSWN+M+ GY++ + ++L + M + VK++
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 85 TTFSTILSVCAQLNSLIDG-KQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFD 143
TF + + C + +G K +V + S ++ Y+ ++E+A +V +
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 144 EL-HEDNELLWSLMLVG---YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE 199
+ + +W +L + + L A + I M +D + L + YA+S D E
Sbjct: 657 NMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQE 716
Query: 200 KALKLFRWMRE 210
+A K+ + M E
Sbjct: 717 RA-KVRKLMNE 726
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 301 bits (770), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/641 (29%), Positives = 325/641 (50%), Gaps = 57/641 (8%)
Query: 53 NTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLK 112
N L SK K +E+ + M ++ V ++ ++ + C +L SL G+ +H
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH----- 106
Query: 113 SGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDV 172
R+ + + LL + +L Y +C + DA +
Sbjct: 107 --------------------------DRMRMGIENPSVLLQNCVLQMYCECRSLEDADKL 140
Query: 173 FIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLG 232
F +M + + V T +IS YA+ +KA+ LF M SG+ P+ + +++++
Sbjct: 141 FDEMSELNAVSRTTMISAYAEQ-GILDKAVGLFSGMLASGDKPPSS-MYTTLLKSLVNPR 198
Query: 233 AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN 292
A G+ +H +I+ G + SI ++ Y C GA RV+D++ A L+
Sbjct: 199 ALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMV 258
Query: 293 GLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSKRL---FEKMPHRS 345
G GR DA +F L E +S ++ ++K A +++ K++ K+ S
Sbjct: 259 GYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLES 318
Query: 346 IISLNTMI--------------SVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+S+ T + E+ E N V+W+++ISGY Q + E+A++ + ++R
Sbjct: 319 EVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLR 378
Query: 391 -KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSI 449
K A T++ +F ACS L G +HA +K + Y ++L+ MYS+CG +
Sbjct: 379 SKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCL 438
Query: 450 NDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC 509
+DA F S+ +P++ AWTA ++G++++G SEA+ LFE M+ + PN+ TF+ VL+AC
Sbjct: 439 DDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTAC 498
Query: 510 VRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVV 568
AGLV +G +M + Y V PT++HY C++D+ RSG L EA +F+K+MP E DA+
Sbjct: 499 SHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMS 558
Query: 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628
W LS CW N+E+GE A +++ LD + + YV+ N+Y GKW + ++ K +
Sbjct: 559 WKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNE 618
Query: 629 LEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHL 669
+KK+ CSWI+ ++H F V D+++P IY L+
Sbjct: 619 RMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF 659
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 207/473 (43%), Gaps = 61/473 (12%)
Query: 34 LVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSV 93
L A LFD+M VS TM+ Y++ D+++ L S M S K + ++T+L
Sbjct: 134 LEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKS 193
Query: 94 CAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLW 153
+L G+QIH V+++G + +G++ Y C + AKRVFD++ +
Sbjct: 194 LVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAC 253
Query: 154 SLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGE 213
+ ++VGY Q DA +F+ + + V W
Sbjct: 254 TGLMVGYTQAGRARDALKLFVDLVTEGV------------------------EW------ 283
Query: 214 NMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAM 273
+ + F V++ACA L GK +H + K G E + S+G L++FY C +F+ A
Sbjct: 284 ---DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESAC 340
Query: 274 RVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA-----NSISYNSMIKGYAVY 328
R + + P + +++I+G M + E+A F L NS +Y S+ + +V
Sbjct: 341 RAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVL 400
Query: 329 GQVDDSKRLFEKMPHRSII-------SLNTMIS----------VIPEMERNP--VTWNSM 369
+ ++ RS+I +L TM S V M+ NP V W +
Sbjct: 401 ADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAF 459
Query: 370 ISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQ-LLHAHLVKTP 428
ISG+ +AL+L+ M + TF + ACS G ++QG+ L L K
Sbjct: 460 ISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYN 519
Query: 429 FESNVYVGTSLVDMYSRCGSINDAQASFSSIS-SPNVAAWTALMNG-YSHHGL 479
+ ++D+Y+R G +++A ++ P+ +W ++G ++H L
Sbjct: 520 VAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNL 572
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 186/412 (45%), Gaps = 58/412 (14%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G LV A+ +FDQM ++ V+ ++ GY++ + ++L L + V+ + FS +L
Sbjct: 233 GWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVL 292
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
CA L L GKQIH V K G E VG+ L+ FY C E A R F E+ E N++
Sbjct: 293 KACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV 352
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
WS ++ GY Q + E+A+K F+ +R
Sbjct: 353 SWSAIISGYCQMSQF--------------------------------EEAVKTFKSLRSK 380
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIK---CGFEFDESIGGALIEFYCGCEA 268
++ N +T+ S+ +AC+ L G VH IK G ++ ES ALI Y C
Sbjct: 381 NASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES---ALITMYSKCGC 437
Query: 269 FDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKG 324
D A V++ ++NP + A + I+G G +A +F ++ + NS+++ +++
Sbjct: 438 LDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTA 497
Query: 325 YAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQ 384
+ G V+ K + M + +V P ++ ++ MI Y ++ L ++AL+
Sbjct: 498 CSHAGLVEQGKHCLDTMLRK--------YNVAPTIDH----YDCMIDIYARSGLLDEALK 545
Query: 385 LYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYV 435
M+ + + ++ C +L+ G++ L + P ++ YV
Sbjct: 546 F---MKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYV 594
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 25 ITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNE 84
IT + G L A +F+ M +V+W + G++ + E+L L M +K N
Sbjct: 429 ITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNS 488
Query: 85 TTFSTILSVCAQLNSLIDGKQIHCL 109
TF +L+ C+ + GK HCL
Sbjct: 489 VTFIAVLTACSHAGLVEQGK--HCL 511
>sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein At1g19720
OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1
Length = 894
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 198/703 (28%), Positives = 343/703 (48%), Gaps = 57/703 (8%)
Query: 11 LMTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLS 70
L T+ + V T K ++ + G + AR +FD M R + +W+ M+ YS+ ++ E
Sbjct: 109 LFTEPDVFVET-KLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAK 167
Query: 71 LVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYA 130
L M + V ++ F IL CA + GK IH +V+K G V + +L YA
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 131 NCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDV----VVWTK 186
C E++ A + F + E + + W+ +L+ Y Q +A ++ +M K+ + V W
Sbjct: 228 KCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNI 287
Query: 187 LISGYAKSVDGCEKALKL-------------FRW-----------MRESGENM------- 215
LI GY + + C+ A+ L F W MR +M
Sbjct: 288 LIGGYNQ-LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 216 ---PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGA 272
PN T S + AC+ L +G VH + +K GF D +G +L++ Y C + A
Sbjct: 347 GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA 406
Query: 273 MRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEAN----SISYNSMIKGYAVY 328
+V+D ++N + NS+I G G A +F R+ +AN I++N+MI GY
Sbjct: 407 RKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKN 466
Query: 329 GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388
G ++ LF++M +++RN TWN +I+GY+QN ++AL+L+
Sbjct: 467 GDEGEAMDLFQRMEKDG------------KVQRNTATWNLIIAGYIQNGKKDEALELFRK 514
Query: 389 MRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
M+ T L AC+ L + + +H +++ ++ V +L D Y++ G
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 449 INDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSA 508
I ++ F + + ++ W +L+ GY HG A+ LF M Q I PN T ++ A
Sbjct: 575 IEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
Query: 509 CVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAV 567
G V+EG K+F S+ + Y ++P LEH + +V L GR+ L EA +FI++M I+ +
Sbjct: 635 HGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Query: 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627
+W + L+ C ++++ AA+ +F L+ + + I+S IYA+ K G+ ++ K
Sbjct: 695 IWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRR 754
Query: 628 HLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLT 670
+KK G SWIE+ + +H F+ D++ +V+Y +E ++
Sbjct: 755 DNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMS 797
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 9/241 (3%)
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFS 457
RST+ L +C GS+ G++LHA E +V+V T L+ MY++CG I DA+ F
Sbjct: 81 RSTYLKLLESCIDSGSIHLGRILHARF-GLFTEPDVFVETKLLSMYAKCGCIADARKVFD 139
Query: 458 SISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNE 517
S+ N+ W+A++ YS E LF +M++ ++P+ F +L C G V
Sbjct: 140 SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
G I + G+ L ++ + + G L A +F + M E D + W ++L A
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR-ERDVIAWNSVLLA-- 256
Query: 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNI----YAVLGKWGKKMDIRKRLTHLEVKK 633
+ E A + + ++K+ IS ++ NI Y LGK MD+ +++ +
Sbjct: 257 -YCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA 315
Query: 634 D 634
D
Sbjct: 316 D 316
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 299 bits (765), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 195/667 (29%), Positives = 324/667 (48%), Gaps = 61/667 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS-NVKLNETTFSTI 90
G + AR++F + V +N ++ G+S SLS+ + + +S ++K N +T++
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 91 LSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNE 150
+S + G+ IH + G + +GS ++ Y + +E+A++VFD
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFD------- 178
Query: 151 LLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRE 210
+MP+KD ++W +ISGY K+ E ++++FR +
Sbjct: 179 ------------------------RMPEKDTILWNTMISGYRKNEMYVE-SIQVFRDLIN 213
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
+ T ++ A A L G +H L K G + + I Y C
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK 273
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKG------ 324
++ P + A N++I+G S G E + +F L + + +S +
Sbjct: 274 MGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG 333
Query: 325 -----YAVYGQVDDSKRLFEKMPHRSI-ISLNTMISVIPEME-----------RNPVTWN 367
YA++G S L H S+ +L T+ S + E+E ++ +WN
Sbjct: 334 HLMLIYAIHGYCLKSNFL----SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKT 427
+MISGY QN L E A+ L+ M+K T + + AC+ LG+L G+ +H + T
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 428 PFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF 487
FES++YV T+L+ MY++CGSI +A+ F ++ N W +++GY HG G EA+ +F
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIF 509
Query: 488 EIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGR 546
ML I P TF+ VL AC AGLV EG +IF SM YG P+++HY C+VD+LGR
Sbjct: 510 YEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGR 569
Query: 547 SGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVIL 606
+GHL A +FI+ M IE + VW LL AC + + ++K+F LD + +V+L
Sbjct: 570 AGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLL 629
Query: 607 SNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATL 666
SNI++ + + +R+ ++ K PG + IE+ H F+ D+++P IY L
Sbjct: 630 SNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKL 689
Query: 667 EHLTANL 673
E L +
Sbjct: 690 EKLEGKM 696
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 35/252 (13%)
Query: 1 MKLYATQSQTLMTQETLIVSTNKAITEC-GRNGQLVTARNLFDQMPIRTVVSWNTMLCGY 59
M +YA L + S + A+T + ++ +AR LFD+ P +++ SWN M+ GY
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 60 SKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFE 119
++ ++++SL M +S N T + ILS CAQL +L GK +H LV + +E
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455
Query: 120 FVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKK 179
+V + L+ YA C I EA+R+FD + + NE+ W+ M
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTM----------------------- 492
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG-K 238
ISGY G ++AL +F M SG P TF V+ AC+ G EG +
Sbjct: 493 --------ISGYGLHGQG-QEALNIFYEMLNSGIT-PTPVTFLCVLYACSHAGLVKEGDE 542
Query: 239 VVHGLLIKCGFE 250
+ + ++ + GFE
Sbjct: 543 IFNSMIHRYGFE 554
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 15/185 (8%)
Query: 397 TRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASF 456
+++T+ F + + L Q HA ++ F +++ + T L S G+I A+ F
Sbjct: 19 SKNTYLDFFKRSTSISHLAQ---THAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIF 75
Query: 457 SSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAATFVGVLSACV----- 510
S+ P+V + LM G+S + ++ +F + D+ PN++T+ +SA
Sbjct: 76 LSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDD 135
Query: 511 RAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWG 570
RAG V G + S ++ + +V + + + +A + MP E D ++W
Sbjct: 136 RAGRVIHGQAVVDGCDSELLLG-----SNIVKMYFKFWRVEDARKVFDRMP-EKDTILWN 189
Query: 571 ALLSA 575
++S
Sbjct: 190 TMISG 194
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 299 bits (765), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 206/670 (30%), Positives = 329/670 (49%), Gaps = 64/670 (9%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
GQ+ + N D + ++ N L Y ++ L + M S+V+ ++ TF +L
Sbjct: 263 GQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILML 322
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
+ +++SL G+Q+HC+ LK G + V + L+ Y + A+ VFD + E
Sbjct: 323 ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE---- 378
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCE-KALKLFRWMRE 210
+D++ W +I+G A+ +G E +A+ LF +
Sbjct: 379 ---------------------------RDLISWNSVIAGIAQ--NGLEVEAVCLFMQLLR 409
Query: 211 SGENMPNEYTFDSVIRACARLG-AFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G P++YT SV++A + L K VH IK D + ALI+ Y
Sbjct: 410 CGLK-PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 468
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMG-----------------RIEDAEL--IFNRL 310
A +++R N L A N+++ G R +D L +F
Sbjct: 469 KEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 311 TEANSISYNSMIKGYAVYGQVD-----DSKRLFEKMPHRSIISLNTMISVIPEMERNPVT 365
+I+ + YA+ D S L + + + IP + V
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV--PDDVA 585
Query: 366 WNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLV 425
W +MISG ++N E+A ++ MR + + T + L A SCL +L+QG+ +HA+ +
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 645
Query: 426 KTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVL 485
K ++ +VGTSLVDMY++CGSI+DA F I N+ AW A++ G + HG G E +
Sbjct: 646 KLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQ 705
Query: 486 LFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK-SYGVVPTLEHYTCVVDLL 544
LF+ M I P+ TF+GVLSAC +GLV+E K RSM YG+ P +EHY+C+ D L
Sbjct: 706 LFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADAL 765
Query: 545 GRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYV 604
GR+G + +AE I+ M +E A ++ LL+AC + E G+R A K+ L+ SAYV
Sbjct: 766 GRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYV 825
Query: 605 ILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYA 664
+LSN+YA KW + R + +VKKDPG SWIE+ +++H F V+DR+N +IY
Sbjct: 826 LLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYR 885
Query: 665 TLEHLTANLN 674
++ + ++
Sbjct: 886 KVKDMIRDIK 895
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 143/620 (23%), Positives = 267/620 (43%), Gaps = 74/620 (11%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAK-----FDESLSLVSTMH 76
N I+ + G L AR +FD+MP R +VSWN++L Y++ ++ ++ L +
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 77 RSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIE 136
+ V + T S +L +C + + H K G + EFV L+ Y +++
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKM------PKKDVVVWTKLISG 190
E K +F+E+ + +LW+LML Y++ +A D+ P + + ISG
Sbjct: 198 EGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISG 257
Query: 191 ----------YAKSVDGCEKA---------------------LKLFRWMRESGENMPNEY 219
+A D + LK F M ES ++
Sbjct: 258 DDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC-DQV 316
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
TF ++ ++ + G+ VH + +K G + ++ +LI YC F A V+D +
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYAVYGQVDDSK 335
L + NS+I G+ G +A +F +L + + + S++K + +
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPE----G 432
Query: 336 RLFEKMPHRSIISLNTM------ISVIPEMERNP----------------VTWNSMISGY 373
K H I +N + ++I RN V WN+M++GY
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGY 492
Query: 374 VQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNV 433
Q++ K L+L+ M K T + +F C L ++ QG+ +HA+ +K+ ++ ++
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552
Query: 434 YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ 493
+V + ++DMY +CG ++ AQ +F SI P+ AWT +++G +G A +F M
Sbjct: 553 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 612
Query: 494 DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553
++P+ T + A + +G +I + T +VD+ + G + +A
Sbjct: 613 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 672
Query: 554 EEFIKDMPIELDAVVWGALL 573
K + + ++ W A+L
Sbjct: 673 YCLFKRIEM-MNITAWNAML 691
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 188/424 (44%), Gaps = 24/424 (5%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS----VDGCEKALKLFRWMRESGENM 215
Y +C ++ A VF KMP +D+V W +++ YA+S V+ ++A LFR +R+
Sbjct: 84 YSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD-VVY 142
Query: 216 PNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+ T +++ C G + HG K G + DE + GAL+ Y +
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSK 335
++ + + N ++ + MG E+A + + ++ ++ N + DDS
Sbjct: 203 FEEMPYRDVVLWNLMLKAYLEMGFKEEA-IDLSSAFHSSGLNPNEITLRLLARISGDDS- 260
Query: 336 RLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAID 395
+ +S + N SV + R N +S Y+ + + L+ + M + ++
Sbjct: 261 ---DAGQVKSFANGNDASSVSEIIFR-----NKGLSEYLHSGQYSALLKCFADMVESDVE 312
Query: 396 RTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQAS 455
+ TF ++ + SL GQ +H +K + + V SL++MY + A+
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 456 FSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLV 515
F ++S ++ +W +++ G + +GL EAV LF +L + P+ T VL A A +
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA---ASSL 429
Query: 516 NEGMKIFRSMKSYGV----VPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
EG+ + + + + + V T ++D R+ + EAE + D V W A
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH--NFDLVAWNA 487
Query: 572 LLSA 575
+++
Sbjct: 488 MMAG 491
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 300 IEDAELIFNRLTEANSISY---------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLN 350
I ++L+ + T A +++ N++I Y+ G + ++R+F+KMP R ++S
Sbjct: 50 ITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVS-- 107
Query: 351 TMISVIPEMERNPVTWNSMISGYVQN------NLHEKALQLYMTMRKLAIDRTRSTFSVL 404
WNS+++ Y Q+ N+ ++A L+ +R+ + +R T S +
Sbjct: 108 ---------------WNSILAAYAQSSECVVENI-QQAFLLFRILRQDVVYTSRMTLSPM 151
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
C G + + H + K + + +V +LV++Y + G + + + F + +V
Sbjct: 152 LKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV 211
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATF 502
W ++ Y G EA+ L + PN T
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 298 bits (763), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 207/684 (30%), Positives = 326/684 (47%), Gaps = 66/684 (9%)
Query: 5 ATQSQTLMT-QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWA 63
A Q + T T I N + + G+L A ++F+ + + VVSWN+++ GYS+
Sbjct: 35 AVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNG 94
Query: 64 KFDES---LSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEF 120
S + L M ++ N T + I + L S G+Q H LV+K
Sbjct: 95 GISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVK-------- 146
Query: 121 VGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVG-YVQCNLMSDAFDVFIKMPKK 179
F +++ D L VG Y + L+ D VF MP++
Sbjct: 147 ------------------MSSFGDIYVDTSL------VGMYCKAGLVEDGLKVFAYMPER 182
Query: 180 DVVVWTKLISGYAKSVDGCEKALKLFR-WMRESGENMPNEYTFDSVIRACARLGAFCEGK 238
+ W+ ++SGYA + E+A+K+F ++RE E ++Y F +V+ + A G+
Sbjct: 183 NTYTWSTMVSGYA-TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
Query: 239 VVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMG 298
+H + IK G ++ AL+ Y CE+ + A +++D + ++++ G G
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 299 RIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFE-KMPH---------RSIIS 348
+A +F+R+ A I G V D L E K H R + +
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVG--VLNACSDICYLEEGKQLHSFLLKLGFERHLFA 359
Query: 349 LNTMISVIPE--------------MERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394
++ + + ER+ W S+ISGYVQN+ +E+AL LY M+ I
Sbjct: 360 TTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419
Query: 395 DRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454
T + + ACS L +L+ G+ +H H +K F V +G++L MYS+CGS+ D
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNL 479
Query: 455 SFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGL 514
F + +V +W A+++G SH+G G EA+ LFE ML + + P+ TFV ++SAC G
Sbjct: 480 VFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGF 539
Query: 515 VNEGMKIFRSMK-SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALL 573
V G F M G+ P ++HY C+VDLL R+G L EA+EFI+ I+ +W LL
Sbjct: 540 VERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILL 599
Query: 574 SACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKK 633
SAC E+G A +K+ L + S YV LS IY LG+ + K + V K
Sbjct: 600 SACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSK 659
Query: 634 DPGCSWIELNSRVHAFSVEDRNNP 657
+ GCSWIEL ++ H F V D +P
Sbjct: 660 EVGCSWIELKNQYHVFVVGDTMHP 683
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 156/383 (40%), Gaps = 62/383 (16%)
Query: 237 GKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLIS 296
G+ VHG +I+ G L+ FY C A +++ + + + NSLI G
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 297 MGRIEDAELIFNRLTE--ANSISYN----------------------------------- 319
G I + + E A I N
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 320 -----SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYV 374
S++ Y G V+D ++F MP ERN TW++M+SGY
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMP-----------------ERNTYTWSTMVSGYA 195
Query: 375 QNNLHEKALQLYMTMRKLAIDRTRS--TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESN 432
E+A++++ + + + S F+ + + + + G+ +H +K
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492
V + +LV MYS+C S+N+A F S N W+A++ GYS +G EAV LF M
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS 315
Query: 493 QDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552
I P+ T VGVL+AC + EG ++ + G L T +VD+ ++G L +
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLAD 375
Query: 553 AEEFIKDMPIELDAVVWGALLSA 575
A + D E D +W +L+S
Sbjct: 376 ARKGF-DCLQERDVALWTSLISG 397
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMN 472
+L G+ +H +++T + + LV+ Y++CG + A + F++I +V +W +L+
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 473 GYSHHGLGSEA---VLLFEIMLEQDIVPNAATFVGVL---SACVRAGLVNEGMKIFRSMK 526
GYS +G S + + LF M QDI+PNA T G+ S+ + + + + M
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 527 SYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
S+G + T +V + ++G + + + MP E + W ++S
Sbjct: 149 SFGDIYV---DTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSG 193
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 195/632 (30%), Positives = 298/632 (47%), Gaps = 85/632 (13%)
Query: 48 TVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV---KLNETTFSTILSVCAQLNSLIDGK 104
+ SWN + G+S+ ES L M R + + T+ + VCA L G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 105 QIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCN 164
I VLK E V + + +A+C ++E A++V
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKV----------------------- 213
Query: 165 LMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSV 224
F + P +D+V W LI+GY K + EKA+ +++ M G P++ T +
Sbjct: 214 --------FDESPVRDLVSWNCLINGY-KKIGEAEKAIYVYKLMESEGVK-PDDVTMIGL 263
Query: 225 IRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCL 284
+ +C+ LG GK + + + G + AL++ + C
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKC------------------ 305
Query: 285 NASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHR 344
G I +A IF+ L + +S+ +MI GYA G +D S++LF+ M
Sbjct: 306 -------------GDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDME-- 350
Query: 345 SIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVL 404
E++ V WN+MI G VQ + AL L+ M+ T
Sbjct: 351 ---------------EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHC 395
Query: 405 FHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNV 464
ACS LG+L G +H ++ K NV +GTSLVDMY++CG+I++A + F I + N
Sbjct: 396 LSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNS 455
Query: 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRS 524
+TA++ G + HG S A+ F M++ I P+ TF+G+LSAC G++ G F
Sbjct: 456 LTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQ 515
Query: 525 MKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNME 583
MKS + + P L+HY+ +VDLLGR+G L EA+ ++ MP+E DA VWGALL C N+E
Sbjct: 516 MKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVE 575
Query: 584 VGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELN 643
+GE+AA+K+ LD YV+L +Y W R+ + V+K PGCS IE+N
Sbjct: 576 LGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVN 635
Query: 644 SRVHAFSVEDRNNPNCNVIYATLEHLTANLNS 675
V F V D++ P IY L L ++ S
Sbjct: 636 GIVCEFIVRDKSRPESEKIYDRLHCLGRHMRS 667
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 210/428 (49%), Gaps = 26/428 (6%)
Query: 32 GQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTIL 91
G + AR +FD+ P+R +VSWN ++ GY K + ++++ + M VK ++ T ++
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 92 SVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNEL 151
S C+ L L GK+ + V ++G + + L+ ++ C +I EA+R+FD L + +
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Query: 152 LWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRES 211
W+ M+ GY +C L+ + +F M +KDVV+W +I G ++ G + AL LF+ M+ S
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG-QDALALFQEMQTS 383
Query: 212 GENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDG 271
P+E T + AC++LGA G +H + K + ++G +L++ Y C
Sbjct: 384 NTK-PDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 442
Query: 272 AMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEA----NSISYNSMIKGYAV 327
A+ V+ ++ ++I GL G A FN + +A + I++ ++
Sbjct: 443 ALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCH 502
Query: 328 YGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYM 387
G + + F +M R +LN P+++ ++ M+ + L E+A +L
Sbjct: 503 GGMIQTGRDYFSQMKSR--FNLN------PQLKH----YSIMVDLLGRAGLLEEADRL-- 548
Query: 388 TMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK-TPFESNVYVGTSLVD-MYSR 445
M + ++ + + L C G+++ G+ L++ P +S +YV L+D MY
Sbjct: 549 -MESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYV---LLDGMYGE 604
Query: 446 CGSINDAQ 453
DA+
Sbjct: 605 ANMWEDAK 612
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 139/339 (41%), Gaps = 68/339 (20%)
Query: 14 QETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVS 73
++ IVS I+ R G L +R LFD M + VV WN M+ G + + ++L+L
Sbjct: 319 EKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQ 378
Query: 74 TMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133
M SN K +E T LS C+QL +L G IH + K +G+ L+ YA C
Sbjct: 379 EMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCG 438
Query: 134 EIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAK 193
I EA VF + N L +T +I G A
Sbjct: 439 NISEALSVFHGIQTRNSL-------------------------------TYTAIIGGLAL 467
Query: 194 SVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDE 253
D A+ F M ++G P+E TF ++ AC HG +I+ G ++
Sbjct: 468 HGDA-STAISYFNEMIDAG-IAPDEITFIGLLSACC-----------HGGMIQTGRDY-- 512
Query: 254 SIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT-E 312
F ++ NP L + +++ L G +E+A+ + + E
Sbjct: 513 ---------------FSQMKSRFNL--NPQLKHYSIMVDLLGRAGLLEEADRLMESMPME 555
Query: 313 ANSISYNSMIKGYAVYGQVD----DSKRLFEKMPHRSII 347
A++ + +++ G ++G V+ +K+L E P S I
Sbjct: 556 ADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 594
>sp|P0C8Q8|PP394_ARATH Pentatricopeptide repeat-containing protein At5g19020,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E42 PE=2
SV=1
Length = 685
Score = 297 bits (761), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 191/608 (31%), Positives = 317/608 (52%), Gaps = 55/608 (9%)
Query: 30 RNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFST 89
R+ +L A LFD MP R+ VS+ T++ GY++ ++ E++ L M + LNE T +T
Sbjct: 119 RSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLAT 178
Query: 90 ILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDN 149
++S C+ L + D + + L +K E FV + LL Y C +++A+++FDE+ E N
Sbjct: 179 VISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERN 238
Query: 150 ELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMR 209
+ W++ML GY + L+ A ++F ++ +KD+V W +I G + + ++AL + M
Sbjct: 239 LVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK-NQLDEALVYYTEML 297
Query: 210 ESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
G P+E ++ A AR +G +HG ++K GF+ + + +I FY
Sbjct: 298 RCGMK-PSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDI 356
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYG 329
A++ ++ ++D + S N++I G+ G
Sbjct: 357 KLALQQFE--------------------ASVKD-----------HIASRNALIAGFVKNG 385
Query: 330 QVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTM 389
V+ ++ +F++ + I S WN+MISGY Q+ + AL L+ M
Sbjct: 386 MVEQAREVFDQTHDKDIFS-----------------WNAMISGYAQSLSPQLALHLFREM 428
Query: 390 -RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGS 448
+ T +F A S LGSL++G+ H +L + N + +++DMY++CGS
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGS 488
Query: 449 INDAQASF---SSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGV 505
I A F +ISS ++ W A++ G + HG A+ L+ + I PN+ TFVGV
Sbjct: 489 IETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGV 548
Query: 506 LSACVRAGLVNEGMKIFRSMKS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIEL 564
LSAC AGLV G F SMKS +G+ P ++HY C+VDLLG++G L EA+E IK MP++
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKA 608
Query: 565 DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRK 624
D ++WG LLSA N+E+ E AA ++ +D V+LSN+YA G+W +R+
Sbjct: 609 DVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVRE 668
Query: 625 RLTHLEVK 632
+ +V+
Sbjct: 669 EMRTRDVE 676
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 142/593 (23%), Positives = 268/593 (45%), Gaps = 64/593 (10%)
Query: 83 NETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVF 142
E + L CA N + G+QIHC VLKSG + ++ + +L YA C + +A+ VF
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 143 DELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKAL 202
+ + + +++M+ GYV+ + DA +F MP++ V +T LI GYA++ E A+
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSE-AM 158
Query: 203 KLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEF 262
+LFR MR G M NE T +VI AC+ LG + +++ L IK E + L+
Sbjct: 159 ELFREMRNLG-IMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHM 217
Query: 263 YCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMI 322
YC C A +++D + L N ++NG G IE AE +F+++TE + +S+ +MI
Sbjct: 218 YCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI 277
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKA 382
G Q+D++ + +M + M+ + V ++S ++ K
Sbjct: 278 DGCLRKNQLDEALVYYTEM-------------LRCGMKPSEVMMVDLLSASARSVGSSKG 324
Query: 383 LQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDM 442
LQL+ T+ K D + + H + ++ L + + ++ +L+
Sbjct: 325 LQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIK----LALQQFEASVKDHIASRNALIAG 380
Query: 443 YSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLF-EIMLEQDIVPNAAT 501
+ + G + A+ F ++ +W A+++GY+ A+ LF E++ + P+A T
Sbjct: 381 FVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAIT 440
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHL-------HEAE 554
V V SA G + EG + + + P ++D+ + G + H+ +
Sbjct: 441 MVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTK 500
Query: 555 EF------------------------------IKDMPIELDAVVWGALLSACWFWMNMEV 584
++ +PI+ +++ + +LSAC +E+
Sbjct: 501 NISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVEL 560
Query: 585 GERAAQKM---FGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKD 634
G+ + M G++ I Y + ++ LGK G+ + ++ + + VK D
Sbjct: 561 GKTYFESMKSDHGIEPD-IKHYGCMVDL---LGKAGRLEEAKEMIKKMPVKAD 609
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 173/334 (51%), Gaps = 8/334 (2%)
Query: 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVST 74
E +V+ N + + G + A LFDQ+ + +VSW TM+ G + + DE+L +
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTE 295
Query: 75 MHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFE 134
M R +K +E +LS A+ G Q+H ++K G++C++F+ + ++ FYA +
Sbjct: 296 MLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSND 355
Query: 135 IEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKS 194
I+ A + F+ +D+ + ++ G+V+ ++ A +VF + KD+ W +ISGYA+S
Sbjct: 356 IKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQS 415
Query: 195 VDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254
+ + AL LFR M S + P+ T SV A + LG+ EGK H L +++
Sbjct: 416 LSP-QLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDN 474
Query: 255 IGGALIEFYCGCEAFDGAMRVYDRLEN---PCLNASNSLINGLISMGRIEDAELIFNRLT 311
+ A+I+ Y C + + A+ ++ + +N ++ N++I G + G + A +++ L
Sbjct: 475 LTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQ 534
Query: 312 ----EANSISYNSMIKGYAVYGQVDDSKRLFEKM 341
+ NSI++ ++ G V+ K FE M
Sbjct: 535 SLPIKPNSITFVGVLSACCHAGLVELGKTYFESM 568
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 153/338 (45%), Gaps = 55/338 (16%)
Query: 211 SGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
SGE+ E S + +CA G+ +H ++K G + + I +++ Y C
Sbjct: 34 SGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKC---- 89
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330
RL + DAE +F + +S S+N M+ GY +
Sbjct: 90 -------RL--------------------LADAESVFRDHAKLDSASFNIMVDGYVRSRR 122
Query: 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMR 390
+ D+ +LF+ MP RS +S T +I GY QNN +A++L+ MR
Sbjct: 123 LWDALKLFDVMPERSCVSYTT-----------------LIKGYAQNNQWSEAMELFREMR 165
Query: 391 KLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSIN 450
L I T + + ACS LG + ++L + +K E V+V T+L+ MY C +
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 225
Query: 451 DAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV 510
DA+ F + N+ W ++NGYS GL +A LF+ + E+DIV ++ ++ C+
Sbjct: 226 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIV----SWGTMIDGCL 281
Query: 511 RAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548
R ++E + + M G+ P+ +VDLL S
Sbjct: 282 RKNQLDEALVYYTEMLRCGMKPS---EVMMVDLLSASA 316
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 195/702 (27%), Positives = 337/702 (48%), Gaps = 102/702 (14%)
Query: 22 NKAITECGRNGQLVTARNLFDQMP---IRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRS 78
N I+ ++G A ++F+ M R VVSW+ M+ Y + +++ +
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL 160
Query: 79 NVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG-YECFEFVGSGLL-FFYANCFEIE 136
+ N+ ++ ++ C+ + + G+ ++K+G +E VG L+ F E
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220
Query: 137 EAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVD 196
A +VFD++ E N + W+LM+ +Q +A F+ M ++SG+
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM----------VLSGFES--- 267
Query: 197 GCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIG 256
+++T SV ACA L GK +H I+ G D +
Sbjct: 268 --------------------DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VE 305
Query: 257 GALIEFYCGCEA---FDGAMRVYDRLENPCLNASNSLING-----------------LIS 296
+L++ Y C A D +V+DR+E+ + + +LI G +I+
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 297 MGRIEDAELIFN------------------------RLTEANSISYNSMIKGYAVYGQVD 332
G +E F+ R +NS NS+I + +++
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 333 DSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKL 392
D++R FE + E+N V++N+ + G +N E+A +L + +
Sbjct: 426 DAQRAFESLS-----------------EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 393 AIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDA 452
+ + TF+ L + +GS+++G+ +H+ +VK N V +L+ MYS+CGSI+ A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 453 QASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRA 512
F+ + + NV +WT+++ G++ HG + F M+E+ + PN T+V +LSAC
Sbjct: 529 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588
Query: 513 GLVNEGMKIFRSM-KSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGA 571
GLV+EG + F SM + + + P +EHY C+VDLL R+G L +A EFI MP + D +VW
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648
Query: 572 LLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631
L AC N E+G+ AA+K+ LD +AY+ LSNIYA GKW + ++R+++ +
Sbjct: 649 FLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708
Query: 632 KKDPGCSWIELNSRVHAFSVEDRNNPNCNVIYATLEHLTANL 673
K+ GCSWIE+ ++H F V D +PN + IY L+ L +
Sbjct: 709 VKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/554 (21%), Positives = 236/554 (42%), Gaps = 95/554 (17%)
Query: 68 SLSLVSTMHRSNVK-LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126
++S + M R ++ ++ TFS++L C + GK +H +++ E + + L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 127 FFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTK 186
Y+ + +A+ VF+ + + K+DVV W+
Sbjct: 105 SLYSKSGDSAKAEDVFETMR----------------------------RFGKRDVVSWSA 136
Query: 187 LISGYAKSVDGCE-KALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLI 245
+++ Y +G E A+K+F E G +PN+Y + +VIRAC+ G+V G L+
Sbjct: 137 MMACYGN--NGRELDAIKVFVEFLELGL-VPNDYCYTAVIRACSNSDFVGVGRVTLGFLM 193
Query: 246 KCG-FEFDESIGGALIE-FYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDA 303
K G FE D +G +LI+ F G +F+ A +V+D++ + +I + MG +A
Sbjct: 194 KTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREA 253
Query: 304 -------------------ELIFNRLTEANSISYNSMIKGYAVY---------------- 328
+F+ E ++S + +A+
Sbjct: 254 IRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYA 313
Query: 329 -----GQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQN-NLHEKA 382
G VDD +++F++M S++S W ++I+GY++N NL +A
Sbjct: 314 KCSADGSVDDCRKVFDRMEDHSVMS-----------------WTALITGYMKNCNLATEA 356
Query: 383 LQLYMTM-RKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441
+ L+ M + ++ TFS F AC L + G+ + K SN V S++
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVIS 416
Query: 442 MYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAAT 501
M+ + + DAQ +F S+S N+ ++ ++G + +A L + E+++ +A T
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT 476
Query: 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP 561
F +LS G + +G +I + G+ ++ + + G + A M
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 562 IELDAVVWGALLSA 575
+ + W ++++
Sbjct: 537 -NRNVISWTSMITG 549
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 181/426 (42%), Gaps = 42/426 (9%)
Query: 192 AKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEF 251
A + G AL L M G + TF S++++C R F GK+VH LI+ E
Sbjct: 39 AGDLRGAVSALDL---MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEP 95
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYD---RLENPCLNASNSLINGLISMGRIEDAELIFN 308
D + +LI Y A V++ R + + ++++ + GR DA +F
Sbjct: 96 DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 309 RLTE----ANSISYNSMIKG-----YAVYGQVDDSKRLFEKMPHR--------SII---- 347
E N Y ++I+ + G+V + K H S+I
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRV--TLGFLMKTGHFESDVCVGCSLIDMFV 213
Query: 348 ----SLNTMISVIPEM-ERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFS 402
S V +M E N VTW MI+ +Q +A++ ++ M + + T S
Sbjct: 214 KGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 403 VLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRC---GSINDAQASFSSI 459
+F AC+ L +L G+ LH+ +++ +V SLVDMY++C GS++D + F +
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 460 SSPNVAAWTALMNGYSHH-GLGSEAVLLFEIMLEQDIV-PNAATFVGVLSACVRAGLVNE 517
+V +WTAL+ GY + L +EA+ LF M+ Q V PN TF AC
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Query: 518 GMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACW 577
G ++ G+ V+ + +S + +A+ + + E + V + L
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTC 450
Query: 578 FWMNME 583
+N E
Sbjct: 451 RNLNFE 456
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 33/217 (15%)
Query: 21 TNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNV 80
N I+ ++ ++ A+ F+ + + +VS+NT L G + F+++ L+S + +
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Query: 81 KLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKR 140
++ TF+++LS A + S+ G+QIH V+K G C + V + L+ Y+ C I+ A R
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASR 530
Query: 141 VFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEK 200
VF+ + N + W+ M+ G+ + G+A V
Sbjct: 531 VFNFMENRNVISWTSMITGFAK--------------------------HGFAIRV----- 559
Query: 201 ALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEG 237
L+ F M E G PNE T+ +++ AC+ +G EG
Sbjct: 560 -LETFNQMIEEGVK-PNEVTYVAILSACSHVGLVSEG 594
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 16/202 (7%)
Query: 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSI 459
TFS L +C + G+L+HA L++ E + + SL+ +YS+ G A+ F ++
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 460 ---SSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVN 516
+V +W+A+M Y ++G +A+ +F LE +VPN + V+ AC + V
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 517 EGMKIFRSMKSYGVVPTLEHYTCV----VDLLGRSGHLHEAEEFIKDMPIELDAVVWGAL 572
G + G E CV +D+ + + E + D EL+ V W +
Sbjct: 184 VGRVTLGFLMKTG---HFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 573 LSACWFWMNMEVG-ERAAQKMF 593
++ C M++G R A + F
Sbjct: 241 ITRC-----MQMGFPREAIRFF 257
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 201/680 (29%), Positives = 329/680 (48%), Gaps = 90/680 (13%)
Query: 29 GRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFS 88
G+ G L A +FD MP+R +V+W+T++ + + ++L + M V+ + T
Sbjct: 147 GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMI 206
Query: 89 TILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHED 148
+++ CA+L L + +H + + ++ E + + LL Y+ C ++ ++R+F+
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFE----- 261
Query: 149 NELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWM 208
K+ KK+ V WT +IS Y + + EKAL+ F M
Sbjct: 262 --------------------------KIAKKNAVSWTAMISSYNRG-EFSEKALRSFSEM 294
Query: 209 RESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFD-ESIGGALIEFYCGCE 267
+SG PN T SV+ +C +G EGK VHG ++ + + ES+ AL+E Y C
Sbjct: 295 IKSGIE-PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECG 353
Query: 268 AFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRL----------TEANSIS 317
V + + + A NSLI+ G + A +F ++ T A+SIS
Sbjct: 354 KLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSIS 413
Query: 318 ----------------------------YNSMIKGYAVYGQVDDSKRLFEKMPHRSIISL 349
NS+I Y+ G VD + +F ++ HRS+
Sbjct: 414 ACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSV--- 470
Query: 350 NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACS 409
VTWNSM+ G+ QN +A+ L+ M ++ TF + ACS
Sbjct: 471 --------------VTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACS 516
Query: 410 CLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTA 469
+GSL++G+ +H L+ + + +++ T+L+DMY++CG +N A+ F ++SS ++ +W++
Sbjct: 517 SIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSS 575
Query: 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYG 529
++N Y HG A+ F M+E PN F+ VLSAC +G V EG F MKS+G
Sbjct: 576 MINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFG 635
Query: 530 VVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAA 589
V P EH+ C +DLL RSG L EA IK+MP DA VWG+L++ C M++ +
Sbjct: 636 VSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIK 695
Query: 590 QKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAF 649
+ + Y +LSNIYA G+W + +R + +KK PG S IE++ +V F
Sbjct: 696 NDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRF 755
Query: 650 SVEDRNNPNCNVIYATLEHL 669
+ N + IY L +L
Sbjct: 756 GAGEENRIQTDEIYRFLGNL 775
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/522 (24%), Positives = 234/522 (44%), Gaps = 63/522 (12%)
Query: 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCA-QLNSLIDGKQIHCLVLKSGYECFEFVGS 123
D ++ L + ++++ F ++L CA L G ++H ++K G +
Sbjct: 81 LDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVD------- 133
Query: 124 GLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVV 183
D+ ++ + +L Y Q +SDA VF MP +D+V
Sbjct: 134 ------------------------DDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVA 169
Query: 184 WTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGL 243
W+ L+S ++ + KAL++F+ M + G P+ T SV+ CA LG + VHG
Sbjct: 170 WSTLVSSCLENGE-VVKALRMFKCMVDDGVE-PDAVTMISVVEGCAELGCLRIARSVHGQ 227
Query: 244 LIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLIN----GLISMGR 299
+ + F+ DE++ +L+ Y C + R+++++ + ++I+ G S
Sbjct: 228 ITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKA 287
Query: 300 IEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLF------EKMPHRSIISL---- 349
+ + E N ++ S++ + G + + K + E P+ +SL
Sbjct: 288 LRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVE 347
Query: 350 -----------NTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR 398
T++ V+ +RN V WNS+IS Y + +AL L+ M I
Sbjct: 348 LYAECGKLSDCETVLRVVS--DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDA 405
Query: 399 STFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSS 458
T + AC G + G+ +H H+++T S+ +V SL+DMYS+ GS++ A F+
Sbjct: 406 FTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQ 464
Query: 459 ISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEG 518
I +V W +++ G+S +G EA+ LF+ M + N TF+ V+ AC G + +G
Sbjct: 465 IKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKG 524
Query: 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560
+ + G + L T ++D+ + G L+ AE + M
Sbjct: 525 KWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAETVFRAM 565
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 189/392 (48%), Gaps = 34/392 (8%)
Query: 217 NEYTFDSVIRACA-RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRV 275
+++ F SV+RACA G VHG +IK G + D I +L+ Y A +V
Sbjct: 99 SKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKV 158
Query: 276 YDRLENPCLNASNSLINGLISMGRIEDAELIFNRLT----EANSISYNSMIKGYA----- 326
+D + L A ++L++ + G + A +F + E ++++ S+++G A
Sbjct: 159 FDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCL 218
Query: 327 -----VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEM-----------ERNPVTWNSMI 370
V+GQ+ ++++F+ + SL TM S ++ ++N V+W +MI
Sbjct: 219 RIARSVHGQI--TRKMFD-LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMI 275
Query: 371 SGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFE 430
S Y + EKAL+ + M K I+ T + +C +G +++G+ +H V+ +
Sbjct: 276 SSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD 335
Query: 431 SNV-YVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
N + +LV++Y+ CG ++D + +S N+ AW +L++ Y+H G+ +A+ LF
Sbjct: 336 PNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQ 395
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549
M+ Q I P+A T +SAC AGLV G +I + V + ++D+ +SG
Sbjct: 396 MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNS-LIDMYSKSGS 454
Query: 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMN 581
+ A + V W ++L C F N
Sbjct: 455 VDSASTVFNQIK-HRSVVTWNSML--CGFSQN 483
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 151/333 (45%), Gaps = 28/333 (8%)
Query: 252 DESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLI-----SMGRIEDAELI 306
D + G LI+ C D A+ +Y RL + S + ++ S + +
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123
Query: 307 FNRLTEA----NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
R+ + +++ S++ Y G + D++++F+ MP R +
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDL---------------- 167
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHA 422
V W++++S ++N KAL+++ M ++ T + C+ LG L+ + +H
Sbjct: 168 -VAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHG 226
Query: 423 HLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSE 482
+ + F+ + + SL+ MYS+CG + ++ F I+ N +WTA+++ Y+ +
Sbjct: 227 QITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEK 286
Query: 483 AVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYT-CVV 541
A+ F M++ I PN T VLS+C GL+ EG + + P E + +V
Sbjct: 287 ALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALV 346
Query: 542 DLLGRSGHLHEAEEFIKDMPIELDAVVWGALLS 574
+L G L + E ++ + + + V W +L+S
Sbjct: 347 ELYAECGKLSDCETVLRVVS-DRNIVAWNSLIS 378
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 165/376 (43%), Gaps = 52/376 (13%)
Query: 22 NKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVK 81
N I ++G + +A +F+Q+ R+VV+WN+MLCG+S+ E++SL M+ S ++
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE 502
Query: 82 LNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRV 141
+NE TF ++ C+ + SL GK +H ++ SG + F + L+ YA C ++ A+ V
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDL-FTDTALIDMYAKCGDLNAAETV 561
Query: 142 FDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKA 201
F + + + WS M+ Y + A
Sbjct: 562 FRAMSSRSIVSWSSMINAYGMHGRIG--------------------------------SA 589
Query: 202 LKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIE 261
+ F M ESG PNE F +V+ AC G+ EGK L+ G + I+
Sbjct: 590 ISTFNQMVESGTK-PNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFID 648
Query: 262 FYCGCEAFDGAMRVYDRLENPCL-NAS--NSLINGLISMGRIEDAELIFNRLTE--ANSI 316
A R E P L +AS SL+NG +++ + I N L++ +
Sbjct: 649 LLSRSGDLKEAYRTIK--EMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDT 706
Query: 317 SYNSMIKG-YAVYGQVDDSKRL--------FEKMPHRSIISLNTMISVIPEMERNPVTWN 367
Y +++ YA G+ ++ +RL +K+P S I ++ + E N + +
Sbjct: 707 GYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTD 766
Query: 368 SMIS--GYVQNNLHEK 381
+ G +QN +E+
Sbjct: 767 EIYRFLGNLQNLTNEE 782
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 160/378 (42%), Gaps = 58/378 (15%)
Query: 303 AELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN 362
A L+ + + +I+ YA G D S+ +FE P+ +
Sbjct: 22 AHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPY-----------------PD 64
Query: 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGS---LQQGQL 419
+ +I V +L + A+ LY + ++ F + AC+ GS L G
Sbjct: 65 SFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA--GSREHLSVGGK 122
Query: 420 LHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479
+H ++K + + + TSL+ MY + G+++DA+ F + ++ AW+ L++ +G
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGE 182
Query: 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVP----TLE 535
+A+ +F+ M++ + P+A T + V+ C G ++I RS+ +G + L+
Sbjct: 183 VVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC----LRIARSV--HGQITRKMFDLD 236
Query: 536 HYTC--VVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMF 593
C ++ + + G L +E + + + +AV W A++S+ + E E+A +
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIA-KKNAVSWTAMISS---YNRGEFSEKALRSFS 292
Query: 594 GLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRVHAFSVED 653
+ K I ++ +Y+VL G IR+ VH F+V
Sbjct: 293 EMIKSGIEPNLV--TLYSVLSSCGLIGLIRE------------------GKSVHGFAVRR 332
Query: 654 RNNPNCNVIYATLEHLTA 671
+PN + L L A
Sbjct: 333 ELDPNYESLSLALVELYA 350
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 187/685 (27%), Positives = 331/685 (48%), Gaps = 98/685 (14%)
Query: 33 QLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILS 92
+L AR LFD+MP R ++S+N+++ GY++ +++++ L +N+KL++ T++ L
Sbjct: 97 ELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 93 VCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELL 152
C + L G+ +H LV+ +G F+ + L+ Y+ C ++++A +FD
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFD--------- 207
Query: 153 WSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESG 212
+C+ ++D V W LISGY + V E+ L L M G
Sbjct: 208 ---------RCD-------------ERDQVSWNSLISGYVR-VGAAEEPLNLLAKMHRDG 244
Query: 213 ENMPNEYTFDSVIRACA---RLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269
N+ Y SV++AC G +G +H K G EFD + AL++ Y +
Sbjct: 245 LNLTT-YALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSL 303
Query: 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDA------------------------EL 305
A++++ + + + N++I+G + M I D +
Sbjct: 304 KEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSV 363
Query: 306 IFNRLTEANSISY--------------------NSMIKGYAVYGQVDDSKRLFEKMPHRS 345
+ + A ++ Y +++I+ YA+ G +D + F +
Sbjct: 364 VLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQD 423
Query: 346 IISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLF 405
I S W SMI +VQN E A L+ + I T S++
Sbjct: 424 IAS-----------------WTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM 466
Query: 406 HACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVA 465
AC+ +L G+ + + +K+ ++ V TS + MY++ G++ A F + +P+VA
Sbjct: 467 SACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVA 526
Query: 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSM 525
++A+++ + HG +EA+ +FE M I PN F+GVL AC GLV +G+K F+ M
Sbjct: 527 TYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCM 586
Query: 526 KS-YGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEV 584
K+ Y + P +H+TC+VDLLGR+G L +AE I + V W ALLS+C + + +
Sbjct: 587 KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVI 646
Query: 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNS 644
G+R A+++ L+ + +YV+L NIY G ++R+ + VKK+P SWI + +
Sbjct: 647 GKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGN 706
Query: 645 RVHAFSVEDRNNPNCNVIYATLEHL 669
+ H+F+V D ++P+ +IY LE +
Sbjct: 707 QTHSFAVADLSHPSSQMIYTMLETM 731
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 225/450 (50%), Gaps = 41/450 (9%)
Query: 160 YVQCNLMSDAFDVFIKMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEY 219
Y +C + A +F +MP+++++ + LISGY + + E+A++LF RE+ + +++
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQ-MGFYEQAMELFLEAREANLKL-DKF 149
Query: 220 TFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFDGAMRVYDRL 279
T+ + C G+++HGL++ G + LI+ Y C D AM ++DR
Sbjct: 150 TYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 280 ENPCLNASNSLINGLISMGRIEDAELIFNRL---------------TEANSISYNS--MI 322
+ + NSLI+G + +G E+ + ++ +A I+ N +
Sbjct: 210 DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 323 KGYAVYGQVDDSKRLFEKMPHRSII-------SLNTMISVIPEM-ERNPVTWNSMISGYV 374
KG A++ F+ + +++ SL I + M +N VT+N+MISG++
Sbjct: 270 KGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Query: 375 Q-----NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPF 429
Q + +A +L+M M++ ++ + STFSV+ ACS +L+ G+ +HA + K F
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 430 ESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEI 489
+S+ ++G++L+++Y+ GS D F+S S ++A+WT++++ + + A LF
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV----VDLLG 545
+ I P T ++SAC ++ G +I + Y + ++ +T V + +
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQI----QGYAIKSGIDAFTSVKTSSISMYA 505
Query: 546 RSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+SG++ A + ++ D + A++S+
Sbjct: 506 KSGNMPLANQVFIEVQ-NPDVATYSAMISS 534
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 218/498 (43%), Gaps = 77/498 (15%)
Query: 12 MTQETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSL 71
++Q+ ++ N I + G+L A +LFD+ R VSWN+++ GY + +E L+L
Sbjct: 179 LSQQVFLI--NVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNL 236
Query: 72 VSTMHRSNVKLNETTFSTILSVCA-QLNS--LIDGKQIHCLVLKSGYECFEFVGSGLLFF 128
++ MHR + L ++L C LN + G IHC K G E V + LL
Sbjct: 237 LAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDM 296
Query: 129 YANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWTKLI 188
YA ++EA ++F + N + ++ M+ G++Q + ++D
Sbjct: 297 YAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD-------------------- 336
Query: 189 SGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCG 248
+ +A KLF M+ G P+ TF V++AC+ G+ +H L+ K
Sbjct: 337 -------EASSEAFKLFMDMQRRGLE-PSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 388
Query: 249 FEFDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFN 308
F+ DE IG ALIE Y + + M+ + + + S+I+ + ++E A +F
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFR 448
Query: 309 RLTEAN-------------------SISYNSMIKGYAVYGQVD-------DSKRLFEK-- 340
+L ++ ++S I+GYA+ +D S ++ K
Sbjct: 449 QLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 341 -MPHRSIISLNTMISVIPEMERNP--VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT 397
MP ++ I V +NP T+++MIS Q+ +AL ++ +M+ I
Sbjct: 509 NMP----LANQVFIEV-----QNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPN 559
Query: 398 RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVG--TSLVDMYSRCGSINDAQ-A 454
+ F + AC C G L L + +K + N T LVD+ R G ++DA+
Sbjct: 560 QQAFLGVLIAC-CHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENL 618
Query: 455 SFSSISSPNVAAWTALMN 472
SS + W AL++
Sbjct: 619 ILSSGFQDHPVTWRALLS 636
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 156/359 (43%), Gaps = 71/359 (19%)
Query: 216 PNEYTFDS-----VIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAFD 270
P DS + + A+ G+ GK+ HG +IK + L+ YC C
Sbjct: 40 PKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELG 99
Query: 271 GAMRVYDRLENPCLNASNSLINGLISMGRIE----------DAELIFNRLTEANSISY-- 318
A +++DR+ + + NSLI+G MG E +A L ++ T A ++ +
Sbjct: 100 FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 319 ---------------------------NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNT 351
N +I Y+ G++D + LF++
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD--------- 210
Query: 352 MISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCL 411
ER+ V+WNS+ISGYV+ E+ L L M + ++ T + AC C+
Sbjct: 211 --------ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC-CI 261
Query: 412 ----GSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAW 467
G +++G +H + K E ++ V T+L+DMY++ GS+ +A FS + S NV +
Sbjct: 262 NLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTY 321
Query: 468 TALMNGYSHHG-----LGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKI 521
A+++G+ SEA LF M + + P+ +TF VL AC A + G +I
Sbjct: 322 NAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 401 FSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS 460
+ +LF + GS+ G+L H H++K+ +Y+ +L++MY +C + A+ F +
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 461 SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMK 520
N+ ++ +L++GY+ G +A+ LF E ++ + T+ G L C ++ G
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 521 IFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSA 575
+ + G+ + ++D+ + G L +A D E D V W +L+S
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLF-DRCDERDQVSWNSLISG 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,505,394
Number of Sequences: 539616
Number of extensions: 9835131
Number of successful extensions: 31209
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 20927
Number of HSP's gapped (non-prelim): 2894
length of query: 680
length of database: 191,569,459
effective HSP length: 124
effective length of query: 556
effective length of database: 124,657,075
effective search space: 69309333700
effective search space used: 69309333700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)