Query 005732
Match_columns 680
No_of_seqs 604 out of 3678
Neff 11.3
Searched_HMMs 13730
Date Mon Mar 25 05:54:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005732.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005732hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1w3ba_ a.118.8.1 (A:) O-GlcNA 99.9 5.3E-22 3.8E-26 199.0 40.7 372 190-615 8-388 (388)
2 d1w3ba_ a.118.8.1 (A:) O-GlcNA 99.9 8.8E-21 6.4E-25 190.0 37.5 351 261-629 7-368 (388)
3 d1fcha_ a.118.8.1 (A:) Peroxin 99.6 5.8E-14 4.2E-18 135.8 22.5 228 368-630 24-270 (323)
4 d1fcha_ a.118.8.1 (A:) Peroxin 99.6 1.3E-13 9.4E-18 133.3 22.5 246 358-622 48-307 (323)
5 d1hz4a_ a.118.8.2 (A:) Transcr 99.2 3E-09 2.2E-13 103.4 25.3 266 364-629 13-320 (366)
6 d1hz4a_ a.118.8.2 (A:) Transcr 99.1 5.2E-09 3.8E-13 101.7 24.2 289 320-622 17-356 (366)
7 d1dcea1 a.118.6.1 (A:1-241,A:3 99.1 2.1E-10 1.5E-14 110.7 12.4 265 326-612 40-322 (334)
8 d2h6fa1 a.118.6.1 (A:55-369) P 99.1 1.5E-09 1.1E-13 103.0 16.7 224 400-628 45-285 (315)
9 d1xnfa_ a.118.8.1 (A:) Lipopro 99.0 7.2E-10 5.3E-14 102.5 13.0 114 378-492 14-133 (259)
10 d2h6fa1 a.118.6.1 (A:55-369) P 99.0 5.9E-09 4.3E-13 98.8 19.4 207 363-576 43-265 (315)
11 d2onda1 a.118.8.7 (A:242-549) 99.0 1.9E-08 1.4E-12 95.1 22.2 166 463-629 98-270 (308)
12 d1xnfa_ a.118.8.1 (A:) Lipopro 99.0 2.3E-08 1.6E-12 92.1 20.0 194 434-631 38-240 (259)
13 d2onda1 a.118.8.7 (A:242-549) 99.0 4.9E-08 3.5E-12 92.2 22.6 186 413-600 79-275 (308)
14 d1dcea1 a.118.6.1 (A:1-241,A:3 98.8 5.8E-09 4.2E-13 100.3 10.0 233 327-578 85-322 (334)
15 d1elwa_ a.118.8.1 (A:) Hop {Hu 98.7 7.1E-08 5.1E-12 75.7 12.6 89 541-629 10-100 (117)
16 d2c2la1 a.118.8.1 (A:24-224) S 98.7 6E-08 4.4E-12 85.1 11.7 106 497-603 2-109 (201)
17 d1elwa_ a.118.8.1 (A:) Hop {Hu 98.6 2.4E-07 1.8E-11 72.5 13.3 106 505-611 9-116 (117)
18 d1qqea_ a.118.8.1 (A:) Vesicul 98.6 1.9E-07 1.4E-11 87.1 14.7 154 407-560 46-225 (290)
19 d1hh8a_ a.118.8.1 (A:) Neutrop 98.6 9.7E-07 7E-11 76.1 17.9 140 440-599 12-153 (192)
20 d1hxia_ a.118.8.1 (A:) Peroxin 98.6 5.7E-08 4.1E-12 75.5 8.3 89 539-627 21-111 (112)
21 d2c2la1 a.118.8.1 (A:24-224) S 98.5 1.6E-07 1.1E-11 82.4 10.3 96 462-560 2-98 (201)
22 d1a17a_ a.118.8.1 (A:) Protein 98.5 6.7E-07 4.9E-11 74.6 13.5 117 505-622 16-136 (159)
23 d1qqea_ a.118.8.1 (A:) Vesicul 98.5 6.7E-07 4.9E-11 83.3 14.8 190 438-627 42-267 (290)
24 d1nzna_ a.118.8.1 (A:) Mitocho 98.5 2.8E-07 2E-11 72.3 9.6 107 504-611 4-117 (122)
25 d1a17a_ a.118.8.1 (A:) Protein 98.5 3.7E-07 2.7E-11 76.3 10.9 91 540-630 16-108 (159)
26 d1hh8a_ a.118.8.1 (A:) Neutrop 98.5 2.6E-06 1.9E-10 73.3 16.3 124 291-428 12-150 (192)
27 d2fbna1 a.118.8.1 (A:22-174) P 98.4 1.6E-06 1.2E-10 71.4 13.5 83 567-675 68-150 (153)
28 d1nzna_ a.118.8.1 (A:) Mitocho 98.4 2.7E-07 2E-11 72.4 8.0 92 538-629 3-101 (122)
29 d1p5qa1 a.118.8.1 (A:258-427) 98.4 1.9E-06 1.4E-10 72.5 13.6 113 500-612 14-142 (170)
30 d1p5qa1 a.118.8.1 (A:258-427) 98.4 2.9E-06 2.1E-10 71.3 13.4 58 502-560 65-122 (170)
31 d1ouva_ a.118.18.1 (A:) Cystei 98.4 0.00011 8.1E-09 66.7 25.7 225 362-631 1-249 (265)
32 d1ihga1 a.118.8.1 (A:197-365) 98.3 2.8E-06 2E-10 71.5 10.9 65 565-629 76-140 (169)
33 d1kt1a1 a.118.8.1 (A:254-421) 98.2 8.6E-06 6.3E-10 68.2 13.5 108 500-628 16-126 (168)
34 d1elra_ a.118.8.1 (A:) Hop {Hu 98.2 3E-06 2.2E-10 67.3 8.9 92 537-628 7-107 (128)
35 d1ihga1 a.118.8.1 (A:197-365) 98.2 5.9E-06 4.3E-10 69.4 11.2 134 466-619 29-164 (169)
36 d1kt1a1 a.118.8.1 (A:254-421) 98.2 2.1E-05 1.5E-09 65.8 14.3 141 464-628 15-161 (168)
37 d1ouva_ a.118.18.1 (A:) Cystei 98.1 0.00084 6.2E-08 60.6 25.8 199 361-598 32-250 (265)
38 d2fbna1 a.118.8.1 (A:22-174) P 98.1 1.7E-05 1.2E-09 65.0 12.0 128 465-612 18-147 (153)
39 d1ya0a1 a.118.8.1 (A:1-497) SM 98.0 4.2E-07 3E-11 91.7 1.3 110 500-612 121-232 (497)
40 d1b89a_ a.118.1.3 (A:) Clathri 98.0 0.0043 3.2E-07 57.0 27.9 136 251-412 12-147 (336)
41 d2ff4a2 a.118.8.3 (A:105-283) 97.9 3.8E-05 2.8E-09 64.5 10.3 110 505-628 17-129 (179)
42 d1hxia_ a.118.8.1 (A:) Peroxin 97.8 2.9E-05 2.1E-09 59.6 8.2 89 288-390 20-111 (112)
43 d1b89a_ a.118.1.3 (A:) Clathri 97.8 0.012 8.6E-07 54.0 28.5 288 15-381 11-298 (336)
44 d1tjca_ a.118.8.1 (A:) Prolyl 97.8 4.1E-05 3E-09 56.5 8.4 72 539-610 10-90 (95)
45 d1tjca_ a.118.8.1 (A:) Prolyl 97.7 5.9E-05 4.3E-09 55.6 8.6 65 565-629 4-75 (95)
46 d1zu2a1 a.118.8.1 (A:1-145) Mi 97.7 3.5E-05 2.6E-09 62.3 7.9 124 474-631 7-144 (145)
47 d2hr2a1 a.118.8.8 (A:2-157) Hy 97.7 6.2E-05 4.5E-09 61.9 9.1 64 566-629 55-129 (156)
48 d1ya0a1 a.118.8.1 (A:1-497) SM 97.7 8E-06 5.8E-10 82.1 3.9 202 415-627 66-277 (497)
49 d1elra_ a.118.8.1 (A:) Hop {Hu 97.6 0.00021 1.6E-08 56.1 11.0 58 468-526 8-65 (128)
50 d1zu2a1 a.118.8.1 (A:1-145) Mi 97.6 2E-05 1.4E-09 63.9 4.7 86 544-629 7-115 (145)
51 d1qsaa1 a.118.5.1 (A:1-450) 70 97.5 0.047 3.4E-06 52.9 30.5 263 320-627 77-346 (450)
52 d1zbpa1 e.61.1.1 (A:2-265) Hyp 97.4 0.00023 1.7E-08 63.7 9.3 127 474-603 6-136 (264)
53 d2ff4a2 a.118.8.3 (A:105-283) 97.3 0.00056 4.1E-08 57.1 9.9 71 316-400 68-143 (179)
54 d2hr2a1 a.118.8.8 (A:2-157) Hy 97.2 0.0017 1.2E-07 52.9 11.5 64 536-599 57-133 (156)
55 d1zbpa1 e.61.1.1 (A:2-265) Hyp 97.1 0.00024 1.8E-08 63.6 5.7 121 509-630 6-129 (264)
56 d1qsaa1 a.118.5.1 (A:1-450) 70 97.1 0.15 1.1E-05 49.2 29.7 259 26-312 80-347 (450)
57 d2pqrb1 a.118.8.1 (B:5-128) Mi 96.7 0.0052 3.8E-07 46.2 9.0 66 564-629 33-102 (124)
58 d1wy6a1 a.118.20.1 (A:7-167) H 96.2 0.063 4.6E-06 39.6 12.2 141 474-632 12-152 (161)
59 d1klxa_ a.118.18.1 (A:) Cystei 95.9 0.028 2.1E-06 43.6 10.3 49 580-630 73-125 (133)
60 d1wy6a1 a.118.20.1 (A:7-167) H 95.9 0.13 9.7E-06 37.8 12.6 61 319-393 90-150 (161)
61 d1klxa_ a.118.18.1 (A:) Cystei 95.6 0.1 7.3E-06 40.3 12.2 113 478-598 7-127 (133)
62 d2pqrb1 a.118.8.1 (B:5-128) Mi 94.9 0.14 1E-05 38.2 10.1 72 532-603 33-110 (124)
63 d1v54e_ a.118.11.1 (E:) Cytoch 82.6 2.7 0.0002 29.1 7.0 61 65-126 22-82 (105)
64 d1v54e_ a.118.11.1 (E:) Cytoch 80.5 6.3 0.00046 27.2 8.2 63 378-441 21-83 (105)
65 d2nsza1 a.118.1.14 (A:322-450) 48.2 21 0.0015 26.2 6.3 61 21-81 10-75 (129)
66 d1ug3a1 a.118.1.14 (A:1235-142 39.2 72 0.0053 25.1 8.8 26 154-179 14-39 (193)
67 d1oyza_ a.118.1.16 (A:) Hypoth 39.1 96 0.007 25.4 20.1 48 15-63 30-78 (276)
68 d3bqoa1 a.146.1.1 (A:62-265) T 35.9 94 0.0068 24.3 8.5 49 551-599 91-146 (204)
69 d1ug3a1 a.118.1.14 (A:1235-142 34.7 59 0.0043 25.7 7.5 61 21-81 13-77 (193)
70 d1oaia_ a.5.2.3 (A:) FG-bindin 30.9 28 0.002 21.3 3.6 27 192-218 30-56 (59)
71 d2cfua2 d.157.1.13 (A:20-524) 28.9 47 0.0035 31.2 6.8 66 550-618 417-482 (505)
72 d1mzba_ a.4.5.42 (A:) Ferric u 28.9 65 0.0047 23.5 6.4 59 489-548 6-65 (134)
73 d1bpoa1 a.118.1.4 (A:331-487) 28.5 1.1E+02 0.0081 22.9 9.6 113 262-388 8-124 (157)
74 d1mzba_ a.4.5.42 (A:) Ferric u 28.2 62 0.0045 23.5 6.2 58 75-133 7-65 (134)
75 d1u9pa1 a.43.1.1 (A:72-107) Ar 28.2 37 0.0027 17.2 3.4 23 527-549 13-35 (36)
76 d1jvra_ a.61.1.2 (A:) HTLV-II 28.2 76 0.0055 22.5 5.9 66 48-114 21-92 (137)
77 d1h6pa_ a.146.1.1 (A:) TRF2 {H 27.3 65 0.0047 25.2 6.0 20 541-560 120-139 (203)
78 d3bgea1 a.80.1.2 (A:251-434) U 25.9 1.1E+02 0.0078 23.8 7.2 44 369-412 7-53 (184)
79 d2o02a1 a.118.7.1 (A:1-230) ze 24.7 1.7E+02 0.012 23.7 15.8 160 470-631 9-200 (230)
80 d2f6ma1 a.2.17.1 (A:322-385) V 23.9 31 0.0023 21.4 2.8 46 183-231 3-48 (64)
81 d2nsza1 a.118.1.14 (A:322-450) 23.6 1.2E+02 0.009 21.7 9.4 65 436-500 10-79 (129)
82 d2crba1 a.7.16.1 (A:8-90) Nucl 20.8 1.1E+02 0.0078 20.0 5.1 20 540-559 14-33 (83)
No 1
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=5.3e-22 Score=199.01 Aligned_cols=372 Identities=12% Similarity=0.049 Sum_probs=254.0
Q ss_pred HHHhCCCChHHHHHHHHHHHHcCCCCCCcchHHHHHHHHhccCChhhHHHHHHHHHHhCCCCCchHHHHHHHHhhcCCCH
Q 005732 190 GYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDESIGGALIEFYCGCEAF 269 (680)
Q Consensus 190 ~~~~~~~~~~~a~~~~~~m~~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~ 269 (680)
.+.+.|+ +++|.+.|+++.+.. |.+...+..+...+...|++++|...++.+++..
T Consensus 8 ~~~~~G~-~~~A~~~~~~~l~~~--p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~--------------------- 63 (388)
T d1w3ba_ 8 REYQAGD-FEAAERHCMQLWRQE--PDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQN--------------------- 63 (388)
T ss_dssp HHHHHTC-HHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------------------
T ss_pred HHHHcCC-HHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------------------
Confidence 3444455 555555555555443 2144445555555555555555555555555443
Q ss_pred HHHHHHHhhcCCCccchhhHHHHHHHhcCCHHHHHHHHHHhcc---CChhHHHHHHHHHhccCChhhHHHHHhhcCcCCc
Q 005732 270 DGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTE---ANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSI 346 (680)
Q Consensus 270 ~~A~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~---~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~ 346 (680)
|.+...+..++.++...|++++|+..+..... .+..............+....+...........
T Consensus 64 -----------p~~~~a~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 131 (388)
T d1w3ba_ 64 -----------PLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYN- 131 (388)
T ss_dssp -----------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHC-
T ss_pred -----------CCCHHHHHHHHHHhhhhccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 33333344444445555555555555544444 122223333333333344444433333333222
Q ss_pred chhhhHhhhcccCCCChhHHHHHHHHHHhCCChHHHHHHHHHHHHCCCCCChhhHHHHHHHhcccCChHHHHHHHHHHHh
Q 005732 347 ISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVK 426 (680)
Q Consensus 347 ~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~ 426 (680)
.................+....+...+....... +.+...+..+...+...|+.+.|...+....+
T Consensus 132 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 197 (388)
T d1w3ba_ 132 -------------PDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQ-PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 197 (388)
T ss_dssp -------------TTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred -------------cccccccccccccccccchhhhhHHHHHHhhccC-cchhHHHHhhcccccccCcHHHHHHHHHHHHH
Confidence 2334444555555666667777777666665532 22345566666777777778888777777776
Q ss_pred cCCCchHhHHHHHHHHHHhcCChHHHHHHHhcCC---CCCHHHHHHHHHHHHHcCChhHHHHHHHHHHHCCCCCC-HHHH
Q 005732 427 TPFESNVYVGTSLVDMYSRCGSINDAQASFSSIS---SPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN-AATF 502 (680)
Q Consensus 427 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~A~~~~~~m~~~~~~p~-~~~~ 502 (680)
.. +.+...+..+...+...|++++|...++... ..+...+..+...+.+.|++++|+..|+++.+. .|+ ...+
T Consensus 198 ~~-p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~ 274 (388)
T d1w3ba_ 198 LD-PNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL--QPHFPDAY 274 (388)
T ss_dssp HC-TTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--CSSCHHHH
T ss_pred hC-cccHHHHHHHhhhhhccccHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--CCCCHHHH
Confidence 65 5566777788888888888888888887665 356677888888999999999999999999884 454 6788
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhC-CCCC-CHHHHHHHHHHHHhcC
Q 005732 503 VGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM-PIEL-DAVVWGALLSACWFWM 580 (680)
Q Consensus 503 ~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~~~g 580 (680)
..+...+...|++++|.+.++...... +.+...+..+...+.+.|++++|++.+++. ...| ++..+..++.++...|
T Consensus 275 ~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 353 (388)
T d1w3ba_ 275 CNLANALKEKGSVAEAEDCYNTALRLC-PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 353 (388)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHhhhccC-CccchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 888999999999999999999888653 457788888999999999999999999986 5566 5778899999999999
Q ss_pred CHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCC
Q 005732 581 NMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGK 615 (680)
Q Consensus 581 ~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~ 615 (680)
++++|+..|+++++++|+++.++..++.+|.+.|+
T Consensus 354 ~~~~A~~~~~~al~l~P~~~~a~~~lg~~~~~~~D 388 (388)
T d1w3ba_ 354 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD 388 (388)
T ss_dssp CCHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999998885
No 2
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=8.8e-21 Score=189.97 Aligned_cols=351 Identities=15% Similarity=0.089 Sum_probs=281.8
Q ss_pred HHhhcCCCHHHHHHHHhhcC---CCccchhhHHHHHHHhcCCHHHHHHHHHHhcc--C-ChhHHHHHHHHHhccCChhhH
Q 005732 261 EFYCGCEAFDGAMRVYDRLE---NPCLNASNSLINGLISMGRIEDAELIFNRLTE--A-NSISYNSMIKGYAVYGQVDDS 334 (680)
Q Consensus 261 ~~~~~~g~~~~A~~~~~~~~---~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~--~-~~~~~~~ll~~~~~~~~~~~a 334 (680)
..+.+.|++++|.+.|+++. |.+...+..+..++.+.|++++|...+++... | +..++..+...+.+.|++++|
T Consensus 7 ~~~~~~G~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~g~~~~A 86 (388)
T d1w3ba_ 7 HREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEA 86 (388)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhhcccccc
Confidence 34455566666666666554 44455556677777777788888888877766 4 456888999999999999999
Q ss_pred HHHHhhcCcCCcchhhhHhhhcccCCCChhHHHHHHHHHHhCCChHHHHHHHHHHHHCCCCCChhhHHHHHHHhcccCCh
Q 005732 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSL 414 (680)
Q Consensus 335 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~ 414 (680)
...+......+ +.+...+..........+....+........... .................+..
T Consensus 87 ~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 151 (388)
T d1w3ba_ 87 IEHYRHALRLK--------------PDFIDGYINLAAALVAAGDMEGAVQAYVSALQYN-PDLYCVRSDLGNLLKALGRL 151 (388)
T ss_dssp HHHHHHHHHHC--------------TTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHC-TTCTHHHHHHHHHHHTTSCH
T ss_pred ccccccccccc--------------cccccccccccccccccccccccccccccccccc-cccccccccccccccccchh
Confidence 99999988765 4556666666666666677777766666665543 33444455555666677788
Q ss_pred HHHHHHHHHHHhcCCCchHhHHHHHHHHHHhcCChHHHHHHHhcCCC---CCHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 005732 415 QQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS---PNVAAWTALMNGYSHHGLGSEAVLLFEIML 491 (680)
Q Consensus 415 ~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~A~~~~~~m~ 491 (680)
..+...+....... +.+...+..+...+...|+.+.|...+++..+ .+...|..+...+...|++++|+..+++..
T Consensus 152 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~ 230 (388)
T d1w3ba_ 152 EEAKACYLKAIETQ-PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRAL 230 (388)
T ss_dssp HHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHH
T ss_pred hhhHHHHHHhhccC-cchhHHHHhhcccccccCcHHHHHHHHHHHHHhCcccHHHHHHHhhhhhccccHHHHHHHHHHhH
Confidence 88888887777665 56677888889999999999999999987653 457788999999999999999999999998
Q ss_pred HCCCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhC--CCCCCHHHH
Q 005732 492 EQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM--PIELDAVVW 569 (680)
Q Consensus 492 ~~~~~p~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~--~~~p~~~~~ 569 (680)
..+ ..+...+..+...+.+.|++++|.+.|+++.+.. +.+...+..+...+...|++++|.+.++.. ..+.+...+
T Consensus 231 ~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 308 (388)
T d1w3ba_ 231 SLS-PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ-PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSL 308 (388)
T ss_dssp HHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC-SSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHh-hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCccchhh
Confidence 854 3357778888899999999999999999998754 335778889999999999999999999987 345578888
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCchHHHHHHHHHhhC
Q 005732 570 GALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629 (680)
Q Consensus 570 ~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 629 (680)
..+...+...|++++|+..++++++..|+++.++..++.+|...|++++|.+.+++..+.
T Consensus 309 ~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l 368 (388)
T d1w3ba_ 309 NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI 368 (388)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTT
T ss_pred hHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999998764
No 3
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=5.8e-14 Score=135.82 Aligned_cols=228 Identities=12% Similarity=0.025 Sum_probs=158.2
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHHCCCCCChhhHHHHHHHhcccCChHHHHHHHHHHHhcCCCchHhHHHHHHHHHHhcC
Q 005732 368 SMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG 447 (680)
Q Consensus 368 ~li~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 447 (680)
.....+.+.|++++|+..|+++.+.. +-+..++..+..++...|+++.|...+.++.+.. +.+...+..+...|...|
T Consensus 24 ~~g~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~ 101 (323)
T d1fcha_ 24 EEGLRRLQEGDLPNAVLLFEAAVQQD-PKHMEAWQYLGTTQAENEQELLAISALRRCLELK-PDNQTALMALAVSFTNES 101 (323)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHSC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCChHHHHHHHHhhhccc-cccccccccccccccccc
Confidence 34556777777777777777777643 1234456666666666677777777666666554 344455555555555555
Q ss_pred ChHHHHHHHhcCCCCCHHHHHHHHHHHHHcCChhHHHHHHHHHHHCCCCCC----------------HHHHHHHHHHHhc
Q 005732 448 SINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN----------------AATFVGVLSACVR 511 (680)
Q Consensus 448 ~~~~A~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~m~~~~~~p~----------------~~~~~~ll~~~~~ 511 (680)
++++|.+.++. +... .|+ .......+..+..
T Consensus 102 ~~~~A~~~~~~-------------------------------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (323)
T d1fcha_ 102 LQRQACEILRD-------------------------------WLRY--TPAYAHLVTPAEEGAGGAGLGPSKRILGSLLS 148 (323)
T ss_dssp CHHHHHHHHHH-------------------------------HHHT--STTTGGGCC---------------CTTHHHHH
T ss_pred cccccccchhh-------------------------------HHHh--ccchHHHHHhhhhhhhhcccccchhhHHHHHH
Confidence 55555555544 3331 111 0011111222334
Q ss_pred cCCHHHHHHHHHHHHhcCC-CCChhHHHHHHHHHHhcCChHHHHHHHHhC-CCCC-CHHHHHHHHHHHHhcCCHHHHHHH
Q 005732 512 AGLVNEGMKIFRSMKSYGV-VPTLEHYTCVVDLLGRSGHLHEAEEFIKDM-PIEL-DAVVWGALLSACWFWMNMEVGERA 588 (680)
Q Consensus 512 ~g~~~~A~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~~~g~~~~a~~~ 588 (680)
.+.+.+|.+.+.+...... ..+...+..+...+...|++++|++.+++. ...| +...|..++.++...|++++|+..
T Consensus 149 ~~~~~~a~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 228 (323)
T d1fcha_ 149 DSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAA 228 (323)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhhhcccccccccccccccchhhhhhcccccccchhHHHH
Confidence 4567778888887774332 345677788888899999999999999886 3344 588888999999999999999999
Q ss_pred HHHHHcCCCCCCchHHHHHHHHHhcCCchHHHHHHHHHhhCC
Q 005732 589 AQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630 (680)
Q Consensus 589 ~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 630 (680)
++++++.+|+++.++..++.+|.+.|++++|++.+++..+..
T Consensus 229 ~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 270 (323)
T d1fcha_ 229 YRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQ 270 (323)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999988753
No 4
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=1.3e-13 Score=133.28 Aligned_cols=246 Identities=10% Similarity=0.026 Sum_probs=179.7
Q ss_pred cCCCChhHHHHHHHHHHhCCChHHHHHHHHHHHHCCCCCChhhHHHHHHHhcccCChHHHHHHHHHHHhcCCCchHhHHH
Q 005732 358 EMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGT 437 (680)
Q Consensus 358 ~~~~~~~~~~~li~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 437 (680)
..|.+..+|..+..++...|++++|...|.+..+.. +-+...+..+...+...|++++|...++.+..... .......
T Consensus 48 ~~P~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~ 125 (323)
T d1fcha_ 48 QDPKHMEAWQYLGTTQAENEQELLAISALRRCLELK-PDNQTALMALAVSFTNESLQRQACEILRDWLRYTP-AYAHLVT 125 (323)
T ss_dssp SCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTST-TTGGGCC
T ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHhhhccc-cccccccccccccccccccccccccchhhHHHhcc-chHHHHH
Confidence 356678899999999999999999999999998753 23456788888899999999999999999887541 1111100
Q ss_pred HHHHHHHhcCChHHHHHHHhcCCCCCHHHHHHHHHHHHHcCChhHHHHHHHHHHHCCC-CCCHHHHHHHHHHHhccCCHH
Q 005732 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI-VPNAATFVGVLSACVRAGLVN 516 (680)
Q Consensus 438 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~m~~~~~-~p~~~~~~~ll~~~~~~g~~~ 516 (680)
....... ..+.......+..+...+.+.+|...+.+..+... .++...+..+...+...|+++
T Consensus 126 ~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~ 189 (323)
T d1fcha_ 126 PAEEGAG----------------GAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYD 189 (323)
T ss_dssp -------------------------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHH
T ss_pred hhhhhhh----------------hcccccchhhHHHHHHhhHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHh
Confidence 0000000 00011111122233445667788888888876332 234677888888899999999
Q ss_pred HHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhC-CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Q 005732 517 EGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM-PIEL-DAVVWGALLSACWFWMNMEVGERAAQKMFG 594 (680)
Q Consensus 517 ~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~ 594 (680)
+|+..+++..... +-+...|..+..+|.+.|++++|.+.+++. ...| ++..+..++.+|...|++++|+..|+++++
T Consensus 190 ~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 268 (323)
T d1fcha_ 190 KAVDCFTAALSVR-PNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALN 268 (323)
T ss_dssp HHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hhhcccccccccc-cccccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 9999999998654 336778889999999999999999999987 4445 588899999999999999999999999999
Q ss_pred CCCCCCch-----------HHHHHHHHHhcCCchHHHHH
Q 005732 595 LDKKPISA-----------YVILSNIYAVLGKWGKKMDI 622 (680)
Q Consensus 595 ~~p~~~~~-----------~~~l~~~~~~~g~~~~A~~~ 622 (680)
++|++... +..+..++...|+.+.+...
T Consensus 269 l~p~~~~~~~~~~~~~~~~~~~l~~al~~~~~~d~~~~~ 307 (323)
T d1fcha_ 269 MQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAA 307 (323)
T ss_dssp HHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHHH
T ss_pred hCCcChhhhhhhHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 98886543 45567778788887766554
No 5
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=99.18 E-value=3e-09 Score=103.43 Aligned_cols=266 Identities=11% Similarity=0.012 Sum_probs=196.3
Q ss_pred hHHHHHHHHHHhCCChHHHHHHHHHHHHCCCCCC----hhhHHHHHHHhcccCChHHHHHHHHHHHhcC----C-CchHh
Q 005732 364 VTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRT----RSTFSVLFHACSCLGSLQQGQLLHAHLVKTP----F-ESNVY 434 (680)
Q Consensus 364 ~~~~~li~~~~~~~~~~~A~~~~~~m~~~~~~p~----~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~----~-~~~~~ 434 (680)
.........+...|++++|++++++..+.....+ ...+..+...+...|++++|...++...+.. . .....
T Consensus 13 e~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 92 (366)
T d1hz4a_ 13 EFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALW 92 (366)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcchHHHHH
Confidence 3444556678899999999999999987532222 1356667788899999999999999887631 1 11234
Q ss_pred HHHHHHHHHHhcCChHHHHHHHhcCCC----------C-CHHHHHHHHHHHHHcCChhHHHHHHHHHHHCC----CCCCH
Q 005732 435 VGTSLVDMYSRCGSINDAQASFSSISS----------P-NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQD----IVPNA 499 (680)
Q Consensus 435 ~~~~l~~~~~~~g~~~~A~~~~~~~~~----------~-~~~~~~~l~~~~~~~~~~~~A~~~~~~m~~~~----~~p~~ 499 (680)
.+..+...+...|++..+...+..... + ....+..+...+...|+++.+...+....... .....
T Consensus 93 ~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 172 (366)
T d1hz4a_ 93 SLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQL 172 (366)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHhhhhhhhhHH
Confidence 556677788899999999988876531 1 12355667788899999999999999887632 12234
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHhc--CCCCC----hhHHHHHHHHHHhcCChHHHHHHHHhC-CCCC-----CHH
Q 005732 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSY--GVVPT----LEHYTCVVDLLGRSGHLHEAEEFIKDM-PIEL-----DAV 567 (680)
Q Consensus 500 ~~~~~ll~~~~~~g~~~~A~~~~~~~~~~--~~~~~----~~~~~~l~~~~~~~g~~~~A~~~~~~~-~~~p-----~~~ 567 (680)
..+......+...++...+...+.+.... ..... ...+..+...+...|++++|...+++. ...| ...
T Consensus 173 ~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 252 (366)
T d1hz4a_ 173 QCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQG 252 (366)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHH
Confidence 55666677788899999999888877621 11111 234556677788999999999999987 2222 245
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHc------CCCCCCchHHHHHHHHHhcCCchHHHHHHHHHhhC
Q 005732 568 VWGALLSACWFWMNMEVGERAAQKMFG------LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629 (680)
Q Consensus 568 ~~~~l~~~~~~~g~~~~a~~~~~~~~~------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 629 (680)
.+..+..++...|++++|...+++++. ..|....++..++.+|.+.|++++|.+.+++..+.
T Consensus 253 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~Al~l 320 (366)
T d1hz4a_ 253 QWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKL 320 (366)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 566788889999999999999999874 34555667899999999999999999999987653
No 6
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=99.12 E-value=5.2e-09 Score=101.69 Aligned_cols=289 Identities=11% Similarity=-0.014 Sum_probs=204.5
Q ss_pred HHHHHHhccCChhhHHHHHhhcCcCCcchhhhHhhhcccCCCC-----hhHHHHHHHHHHhCCChHHHHHHHHHHHHCCC
Q 005732 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERN-----PVTWNSMISGYVQNNLHEKALQLYMTMRKLAI 394 (680)
Q Consensus 320 ~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~li~~~~~~~~~~~A~~~~~~m~~~~~ 394 (680)
.....+...|++++|.+++++..... +.+ ..++..+..++...|++++|+..|++..+...
T Consensus 17 lrA~~~~~~g~~~~A~~~~~~aL~~~--------------~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~ 82 (366)
T d1hz4a_ 17 LRAQVAINDGNPDEAERLAKLALEEL--------------PPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMAR 82 (366)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTC--------------CTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhC--------------cCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 34556778889999999988876643 222 34677788899999999999999998865321
Q ss_pred -CCC----hhhHHHHHHHhcccCChHHHHHHHHHHHhc----CCC---chHhHHHHHHHHHHhcCChHHHHHHHhcCCC-
Q 005732 395 -DRT----RSTFSVLFHACSCLGSLQQGQLLHAHLVKT----PFE---SNVYVGTSLVDMYSRCGSINDAQASFSSISS- 461 (680)
Q Consensus 395 -~p~----~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~----~~~---~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~- 461 (680)
.++ ...+..+...+...|++..+...+...... +.. .....+..+...+...|+++.+...+.....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~ 162 (366)
T d1hz4a_ 83 QHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEV 162 (366)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHH
Confidence 111 234556667788899999998888876642 111 1233556677888899999999988876542
Q ss_pred -------CCHHHHHHHHHHHHHcCChhHHHHHHHHHHHC--CCCCC----HHHHHHHHHHHhccCCHHHHHHHHHHHHhc
Q 005732 462 -------PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQ--DIVPN----AATFVGVLSACVRAGLVNEGMKIFRSMKSY 528 (680)
Q Consensus 462 -------~~~~~~~~l~~~~~~~~~~~~A~~~~~~m~~~--~~~p~----~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~ 528 (680)
.....+..+...+...++...+...+.+.... ..... ...+..+...+...|++++|...++.....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 242 (366)
T d1hz4a_ 163 LSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKP 242 (366)
T ss_dssp TTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCC
T ss_pred hhhhhhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 23456666777788899999999888776542 11111 234555666778899999999999988744
Q ss_pred CCCCC---hhHHHHHHHHHHhcCChHHHHHHHHhC-------CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCC
Q 005732 529 GVVPT---LEHYTCVVDLLGRSGHLHEAEEFIKDM-------PIELD-AVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597 (680)
Q Consensus 529 ~~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~~-------~~~p~-~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p 597 (680)
....+ ...+..+..++...|++++|.+.+++. +..|+ ...+..+...+...|++++|...+++++++.+
T Consensus 243 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~Al~l~~ 322 (366)
T d1hz4a_ 243 EFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLAN 322 (366)
T ss_dssp CCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhh
Confidence 33222 344556788999999999999998875 33342 45677788899999999999999999988754
Q ss_pred CC---------CchHHHHHHHHHhcCCchHHHHH
Q 005732 598 KP---------ISAYVILSNIYAVLGKWGKKMDI 622 (680)
Q Consensus 598 ~~---------~~~~~~l~~~~~~~g~~~~A~~~ 622 (680)
.. ...+..+...+...++.+++.+-
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~e~e~~ 356 (366)
T d1hz4a_ 323 RTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQH 356 (366)
T ss_dssp HHCCCHHHHTTHHHHHHHHHHHHHTTCSCHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Confidence 32 12344555667777888877654
No 7
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.10 E-value=2.1e-10 Score=110.66 Aligned_cols=265 Identities=9% Similarity=-0.036 Sum_probs=191.2
Q ss_pred hccCChhhHHHHHhhcCcCCcchhhhHhhhcccCCCChhHHHHHHHHH----------HhCCChHHHHHHHHHHHHCCCC
Q 005732 326 AVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGY----------VQNNLHEKALQLYMTMRKLAID 395 (680)
Q Consensus 326 ~~~~~~~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~----------~~~~~~~~A~~~~~~m~~~~~~ 395 (680)
......++|..+++++.+.+ |.+...|+..-..+ ...|++++|+..++...+.. +
T Consensus 40 ~~~~~~~~al~~~~~~l~~~--------------P~~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~-p 104 (334)
T d1dcea1 40 QAGELDESVLELTSQILGAN--------------PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVN-P 104 (334)
T ss_dssp HTTCCSHHHHHHHHHHHHHC--------------TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHC-T
T ss_pred hcccccHHHHHHHHHHHHHC--------------CCcHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhC-C
Confidence 33344588999999888765 55666665433332 23345788999999988743 2
Q ss_pred CChhhHHHHHHHhcc--cCChHHHHHHHHHHHhcCCCchHhHH-HHHHHHHHhcCChHHHHHHHhcCCC---CCHHHHHH
Q 005732 396 RTRSTFSVLFHACSC--LGSLQQGQLLHAHLVKTPFESNVYVG-TSLVDMYSRCGSINDAQASFSSISS---PNVAAWTA 469 (680)
Q Consensus 396 p~~~~~~~ll~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~g~~~~A~~~~~~~~~---~~~~~~~~ 469 (680)
-+...+.....++.. .++.+++...+..+.+.. +++...+ ......+...+..+.|...++.+.+ .+...|+.
T Consensus 105 k~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p~~~~a~~~ 183 (334)
T d1dcea1 105 KSYGTWHHRCWLLSRLPEPNWARELELCARFLEAD-ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHY 183 (334)
T ss_dssp TCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHH
T ss_pred CcHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhC-chhhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCCCCHHHHHH
Confidence 244455555555444 456899999999999886 4444443 4556778889999999999998885 56788999
Q ss_pred HHHHHHHcCChhHHHHHHHHHHHCCCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCC
Q 005732 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH 549 (680)
Q Consensus 470 l~~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 549 (680)
+...+.+.|++++|...+.+..+ +.|+.. .+...+...+..+++...+....... +++...+..++..+...|+
T Consensus 184 l~~~~~~~~~~~~A~~~~~~~~~--~~~~~~---~~~~~~~~l~~~~~a~~~~~~~l~~~-~~~~~~~~~l~~~~~~~~~ 257 (334)
T d1dcea1 184 RSCLLPQLHPQPDSGPQGRLPEN--VLLKEL---ELVQNAFFTDPNDQSAWFYHRWLLGR-AEPLFRCELSVEKSTVLQS 257 (334)
T ss_dssp HHHHHHHHSCCCCSSSCCSSCHH--HHHHHH---HHHHHHHHHCSSCSHHHHHHHHHHSC-CCCSSSCCCCHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHhHH--hHHHHH---HHHHHHHHhcchhHHHHHHHHHHHhC-cchhhHHHHHHHHHHHHhh
Confidence 99999999999988776665554 223322 22333455566777888888777544 3345556667778888899
Q ss_pred hHHHHHHHHhC-CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHh
Q 005732 550 LHEAEEFIKDM-PIEL-DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612 (680)
Q Consensus 550 ~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~ 612 (680)
+++|.+.+.+. ...| +...+..++.++...|++++|...++++++++|+.+..|..|...+.-
T Consensus 258 ~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~eA~~~~~~ai~ldP~~~~y~~~L~~~~~~ 322 (334)
T d1dcea1 258 ELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLL 322 (334)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcccHHHHHHHHHHHhH
Confidence 99999998877 4555 467778888899999999999999999999999988888888776653
No 8
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=1.5e-09 Score=102.99 Aligned_cols=224 Identities=11% Similarity=0.057 Sum_probs=167.9
Q ss_pred hHHHHHHHhcccCChHHHHHHHHHHHhcCCCchHhHHHHHHHHHHhcC-ChHHHHHHHhcCCC---CCHHHHHHHHHHHH
Q 005732 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCG-SINDAQASFSSISS---PNVAAWTALMNGYS 475 (680)
Q Consensus 400 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~~~~---~~~~~~~~l~~~~~ 475 (680)
.++.+...+.+.+..++|..+++.+++.. |.+...|+....++...| ++++|.+.++.+.+ .+..+|..+...+.
T Consensus 45 a~~~~~~~~~~~e~~~~Al~~~~~ai~ln-P~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~~~~~~ 123 (315)
T d2h6fa1 45 VYDYFRAVLQRDERSERAFKLTRDAIELN-AANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVE 123 (315)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCchHHHHHHHHHHHHHC-CCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHHhHHHH
Confidence 45566667778888999999999999887 777778888888888766 48899998887753 56778888888889
Q ss_pred HcCChhHHHHHHHHHHHCCCCC-CHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCC-----
Q 005732 476 HHGLGSEAVLLFEIMLEQDIVP-NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH----- 549 (680)
Q Consensus 476 ~~~~~~~A~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~----- 549 (680)
+.|++++|+..++++.+. .| +...|..+...+.+.|++++|++.++++.+.++ .+...|+.+..++.+.+.
T Consensus 124 ~l~~~~eAl~~~~kal~~--dp~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p-~n~~a~~~r~~~l~~~~~~~~~~ 200 (315)
T d2h6fa1 124 WLRDPSQELEFIADILNQ--DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDV-RNNSVWNQRYFVISNTTGYNDRA 200 (315)
T ss_dssp HHTCCTTHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCSCSHH
T ss_pred hhccHHHHHHHHhhhhhh--hhcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCC-ccHHHHHHHHHHHHHccccchhh
Confidence 999999999999999884 44 478888888888889999999999999887653 356677777666666555
Q ss_pred -hHHHHHHHHhC-CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCc--hHHHHHHHHHh--cCCchHHHHH
Q 005732 550 -LHEAEEFIKDM-PIEL-DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS--AYVILSNIYAV--LGKWGKKMDI 622 (680)
Q Consensus 550 -~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~--~~~~l~~~~~~--~g~~~~A~~~ 622 (680)
+++|++.+.++ ...| +...|..+...+. ....+++...++++.++.|++.. .+..++.+|.. .+..+.+...
T Consensus 201 ~~~~ai~~~~~al~~~P~~~~~~~~l~~ll~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~y~~~~~~~~~~~~~~ 279 (315)
T d2h6fa1 201 VLEREVQYTLEMIKLVPHNESAWNYLKGILQ-DRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDI 279 (315)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHT-TTCGGGCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHTTCSSHHHH
T ss_pred hhHHhHHHHHHHHHhCCCchHHHHHHHHHHH-hcChHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 56777777765 4444 5677777766544 44467788888888888877544 34566666654 3677778877
Q ss_pred HHHHhh
Q 005732 623 RKRLTH 628 (680)
Q Consensus 623 ~~~~~~ 628 (680)
+++..+
T Consensus 280 ~~ka~~ 285 (315)
T d2h6fa1 280 LNKALE 285 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777654
No 9
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=99.04 E-value=7.2e-10 Score=102.45 Aligned_cols=114 Identities=11% Similarity=-0.087 Sum_probs=67.0
Q ss_pred ChHHHHHHHHHHHHCCCCCC---hhhHHHHHHHhcccCChHHHHHHHHHHHhcCCCchHhHHHHHHHHHHhcCChHHHHH
Q 005732 378 LHEKALQLYMTMRKLAIDRT---RSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQA 454 (680)
Q Consensus 378 ~~~~A~~~~~~m~~~~~~p~---~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 454 (680)
+.+.++.-+++........+ ..++..+...|.+.|++++|...|++.++.. +.++.++..+..+|.+.|++++|++
T Consensus 14 ~~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~-p~~~~a~~~lg~~~~~~g~~~~A~~ 92 (259)
T d1xnfa_ 14 QQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIR-PDMPEVFNYLGIYLTQAGNFDAAYE 92 (259)
T ss_dssp HHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccC-CCCHHHHhhhchHHHHHHHHHHhhh
Confidence 34555566666654321111 1244455566666666666666666666654 4556666666666666666666666
Q ss_pred HHhcCCC---CCHHHHHHHHHHHHHcCChhHHHHHHHHHHH
Q 005732 455 SFSSISS---PNVAAWTALMNGYSHHGLGSEAVLLFEIMLE 492 (680)
Q Consensus 455 ~~~~~~~---~~~~~~~~l~~~~~~~~~~~~A~~~~~~m~~ 492 (680)
.|+++.+ .+..++..+..++...|++++|+..|++..+
T Consensus 93 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 133 (259)
T d1xnfa_ 93 AFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQ 133 (259)
T ss_dssp HHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHhhhhhhHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 6666542 2344566666666666666666666666665
No 10
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=5.9e-09 Score=98.75 Aligned_cols=207 Identities=10% Similarity=0.079 Sum_probs=159.5
Q ss_pred hhHHHHHHHHHHhCCChHHHHHHHHHHHHCCCCCCh-hhHHHHHHHhcccC-ChHHHHHHHHHHHhcCCCchHhHHHHHH
Q 005732 363 PVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTR-STFSVLFHACSCLG-SLQQGQLLHAHLVKTPFESNVYVGTSLV 440 (680)
Q Consensus 363 ~~~~~~li~~~~~~~~~~~A~~~~~~m~~~~~~p~~-~~~~~ll~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 440 (680)
...|+.+...+.+.+.+++|+++++++.+. .|+. ..|+....++...| ++++|...++.+++.. +.+..+|..+.
T Consensus 43 ~~a~~~~~~~~~~~e~~~~Al~~~~~ai~l--nP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~-p~~~~a~~~~~ 119 (315)
T d2h6fa1 43 RDVYDYFRAVLQRDERSERAFKLTRDAIEL--NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQ-PKNYQVWHHRR 119 (315)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHHHH--CCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH-HhhhhHHHHHh
Confidence 456777888889999999999999999984 4654 45677777777766 5899999999999887 77888999999
Q ss_pred HHHHhcCChHHHHHHHhcCCC---CCHHHHHHHHHHHHHcCChhHHHHHHHHHHHCCCCC-CHHHHHHHHHHHhccCC--
Q 005732 441 DMYSRCGSINDAQASFSSISS---PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP-NAATFVGVLSACVRAGL-- 514 (680)
Q Consensus 441 ~~~~~~g~~~~A~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~A~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~g~-- 514 (680)
..+.+.|++++|++.++++.+ .+...|..+...+...|++++|+..++++++. .| +...|+.+...+.+.+.
T Consensus 120 ~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~--~p~n~~a~~~r~~~l~~~~~~~ 197 (315)
T d2h6fa1 120 VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKE--DVRNNSVWNQRYFVISNTTGYN 197 (315)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCSC
T ss_pred HHHHhhccHHHHHHHHhhhhhhhhcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHH--CCccHHHHHHHHHHHHHccccc
Confidence 999999999999999998874 56889999999999999999999999999995 45 46677766665555443
Q ss_pred ----HHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhC----CCCCCHHHHHHHHHHH
Q 005732 515 ----VNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM----PIELDAVVWGALLSAC 576 (680)
Q Consensus 515 ----~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~----~~~p~~~~~~~l~~~~ 576 (680)
+++|++.+..+.... +.+...|..+...+...| .+++.+.++.. +...+...+..++..+
T Consensus 198 ~~~~~~~ai~~~~~al~~~-P~~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~y 265 (315)
T d2h6fa1 198 DRAVLEREVQYTLEMIKLV-PHNESAWNYLKGILQDRG-LSKYPNLLNQLLDLQPSHSSPYLIAFLVDIY 265 (315)
T ss_dssp SHHHHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHTTTC-GGGCHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred hhhhhHHhHHHHHHHHHhC-CCchHHHHHHHHHHHhcC-hHHHHHHHHHHHHhCCCcCCHHHHHHHHHHH
Confidence 688999998888654 336777777766665544 56666666544 2333455555555544
No 11
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.01 E-value=1.9e-08 Score=95.08 Aligned_cols=166 Identities=10% Similarity=0.015 Sum_probs=88.9
Q ss_pred CHHHHHHHHHHHHHcCChhHHHHHHHHHHHCCCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHH
Q 005732 463 NVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVD 542 (680)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~ 542 (680)
+...|...+..+...|+.+.|..+|+++.+.........|...+..+.+.|+.+.|.++|+++...+.. +...|.....
T Consensus 98 ~~~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~ 176 (308)
T d2onda1 98 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAAL 176 (308)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHH
Confidence 334455555555566666666666666655322222334555555555666666666666665543322 2223322222
Q ss_pred H-HHhcCChHHHHHHHHhC--CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCc----hHHHHHHHHHhcCC
Q 005732 543 L-LGRSGHLHEAEEFIKDM--PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPIS----AYVILSNIYAVLGK 615 (680)
Q Consensus 543 ~-~~~~g~~~~A~~~~~~~--~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~----~~~~l~~~~~~~g~ 615 (680)
. +...|+.+.|..+|+.+ ..+.++..|...+..+...|++++|..+|+++++..|.++. .|...+..-...|+
T Consensus 177 ~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~~~g~~~~aR~~fe~ai~~~~~~~~~~~~iw~~~~~fE~~~G~ 256 (308)
T d2onda1 177 MEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD 256 (308)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSC
T ss_pred HHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHcCC
Confidence 2 22345666666666655 12334556666666666666666666666666665554432 35555555555666
Q ss_pred chHHHHHHHHHhhC
Q 005732 616 WGKKMDIRKRLTHL 629 (680)
Q Consensus 616 ~~~A~~~~~~~~~~ 629 (680)
.+.+.++.+++.+.
T Consensus 257 ~~~~~~~~~r~~~~ 270 (308)
T d2onda1 257 LASILKVEKRRFTA 270 (308)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 66666666665543
No 12
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=98.96 E-value=2.3e-08 Score=92.07 Aligned_cols=194 Identities=13% Similarity=0.008 Sum_probs=106.1
Q ss_pred hHHHHHHHHHHhcCChHHHHHHHhcCCC---CCHHHHHHHHHHHHHcCChhHHHHHHHHHHHCCCCCC-HHHHHHHHHHH
Q 005732 434 YVGTSLVDMYSRCGSINDAQASFSSISS---PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN-AATFVGVLSAC 509 (680)
Q Consensus 434 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~A~~~~~~m~~~~~~p~-~~~~~~ll~~~ 509 (680)
.++..+..+|.+.|++++|.+.|++..+ .++.+|+.+..++.+.|++++|+..|+++.+. .|+ ..++..+..++
T Consensus 38 ~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~a~~~lg~~~ 115 (259)
T d1xnfa_ 38 QLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLEL--DPTYNYAHLNRGIAL 115 (259)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHhhhhhhHHHHH--HhhhhhhHHHHHHHH
Confidence 3455566677777777777777766552 45666777777777777777777777777763 343 45566666667
Q ss_pred hccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhCC-CCCCHHHHHHHHHHHH----hcCCHHH
Q 005732 510 VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMP-IELDAVVWGALLSACW----FWMNMEV 584 (680)
Q Consensus 510 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~-~~p~~~~~~~l~~~~~----~~g~~~~ 584 (680)
...|++++|.+.++...+..+ .+......+...+.+.+..+.+..+..... ..++...+. ++..+. ..+..+.
T Consensus 116 ~~~g~~~~A~~~~~~al~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 193 (259)
T d1xnfa_ 116 YYGGRDKLAQDDLLAFYQDDP-NDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWN-IVEFYLGNISEQTLMER 193 (259)
T ss_dssp HHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHH-HHHHHTTSSCHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHhhcc-ccHHHHHHHHHHHHHhhhHHHHHHHHHHhhccchhhhhhh-HHHHHHHHHHHHHHHHH
Confidence 777777777777777665432 233333333334444444443333333221 111111111 111111 1223344
Q ss_pred HHHHHHHHHcCCCCCCchHHHHHHHHHhcCCchHHHHHHHHHhhCCC
Q 005732 585 GERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEV 631 (680)
Q Consensus 585 a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 631 (680)
+...+.......|....++..++.+|...|++++|.+.+++..+..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 240 (259)
T d1xnfa_ 194 LKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNV 240 (259)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhhhcCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCC
Confidence 44444444444555555666677777777777777777777665443
No 13
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.96 E-value=4.9e-08 Score=92.24 Aligned_cols=186 Identities=9% Similarity=0.048 Sum_probs=150.2
Q ss_pred ChHHHHHHHHHHHhcCCCchHhHHHHHHHHHHhcCChHHHHHHHhcCCC--C-C-HHHHHHHHHHHHHcCChhHHHHHHH
Q 005732 413 SLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISS--P-N-VAAWTALMNGYSHHGLGSEAVLLFE 488 (680)
Q Consensus 413 ~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~--~-~-~~~~~~l~~~~~~~~~~~~A~~~~~ 488 (680)
..+++..++++.++...+.+...+...+..+.+.|+.+.|..+|+.+.+ | + ...|...+....+.|+.+.|.++|+
T Consensus 79 ~~~~a~~i~~ral~~~~p~~~~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~ 158 (308)
T d2onda1 79 FSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFK 158 (308)
T ss_dssp HHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 4578889999998876567777888888999999999999999998754 2 2 4578999999999999999999999
Q ss_pred HHHHCCCCCCHHHHHHHHH-HHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhC----CCC
Q 005732 489 IMLEQDIVPNAATFVGVLS-ACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM----PIE 563 (680)
Q Consensus 489 ~m~~~~~~p~~~~~~~ll~-~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~----~~~ 563 (680)
++.+.+.. +...|..... -+...|+.+.|..+|+.+... .+.+...|..+++.+.+.|+++.|..+|++. +..
T Consensus 159 ~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~-~p~~~~~w~~y~~~~~~~g~~~~aR~~fe~ai~~~~~~ 236 (308)
T d2onda1 159 KAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKK-YGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLP 236 (308)
T ss_dssp HHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSC
T ss_pred HHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Confidence 99986533 3334433333 344578999999999999965 3456888999999999999999999999986 233
Q ss_pred C--CHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCC
Q 005732 564 L--DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPI 600 (680)
Q Consensus 564 p--~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~ 600 (680)
| ....|...+..-...|+.+.+..+++++.+..|+..
T Consensus 237 ~~~~~~iw~~~~~fE~~~G~~~~~~~~~~r~~~~~~~~~ 275 (308)
T d2onda1 237 PEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFREEY 275 (308)
T ss_dssp GGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTTTT
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcccc
Confidence 3 256788888877889999999999999999988764
No 14
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.80 E-value=5.8e-09 Score=100.28 Aligned_cols=233 Identities=10% Similarity=-0.016 Sum_probs=173.6
Q ss_pred ccCChhhHHHHHhhcCcCCcchhhhHhhhcccCCCChhHHHHHHHHHHhCCC--hHHHHHHHHHHHHCCCCCChhhH-HH
Q 005732 327 VYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNL--HEKALQLYMTMRKLAIDRTRSTF-SV 403 (680)
Q Consensus 327 ~~~~~~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~~--~~~A~~~~~~m~~~~~~p~~~~~-~~ 403 (680)
..|++++|+..++.+.+.+ +.+...|..+..++...++ +++|+..+.++..... ++...+ ..
T Consensus 85 ~~~~~~~al~~~~~~l~~~--------------pk~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~-~~~~~~~~~ 149 (334)
T d1dcea1 85 SAALVKAELGFLESCLRVN--------------PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADE-RNFHCWDYR 149 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHC--------------TTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCT-TCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC--------------CCcHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCc-hhhhhhhhH
Confidence 3445778888888888766 6788888888888777654 7899999999988542 334444 44
Q ss_pred HHHHhcccCChHHHHHHHHHHHhcCCCchHhHHHHHHHHHHhcCChHHHHHHHhcCCCCCHHHHHHHHHHHHHcCChhHH
Q 005732 404 LFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEA 483 (680)
Q Consensus 404 ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A 483 (680)
....+...+..+.|...++.+++.. +.+...+..+..++.+.|++++|...++...+....... ....+...+..+++
T Consensus 150 ~~~~~~~~~~~~~Al~~~~~~i~~~-p~~~~a~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~a 227 (334)
T d1dcea1 150 RFVAAQAAVAPAEELAFTDSLITRN-FSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELE-LVQNAFFTDPNDQS 227 (334)
T ss_dssp HHHHHHTCCCHHHHHHHHHTTTTTT-CCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHH-HHHHHHHHCSSCSH
T ss_pred HHHHHHhccccHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhcCHHHHHHHHHHhHHhHHHHHH-HHHHHHHhcchhHH
Confidence 5567778899999999999999887 678888999999999999999887777665542222222 33345666778888
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhC-CC
Q 005732 484 VLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM-PI 562 (680)
Q Consensus 484 ~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~-~~ 562 (680)
...+....... .++...+..+...+...|+.++|...+.+..... +.+...+..++.+|...|++++|.+.+++. ..
T Consensus 228 ~~~~~~~l~~~-~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~-p~~~~~~~~l~~~~~~~~~~~eA~~~~~~ai~l 305 (334)
T d1dcea1 228 AWFYHRWLLGR-AEPLFRCELSVEKSTVLQSELESCKELQELEPEN-KWCLLTIILLMRALDPLLYEKETLQYFSTLKAV 305 (334)
T ss_dssp HHHHHHHHHSC-CCCSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-cchhhHHHHHHHHHHHHhhHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 88888888753 2234455566667777889999999998887543 235677788899999999999999999988 56
Q ss_pred CC-CHHHHHHHHHHHHh
Q 005732 563 EL-DAVVWGALLSACWF 578 (680)
Q Consensus 563 ~p-~~~~~~~l~~~~~~ 578 (680)
.| +...|..+...+..
T Consensus 306 dP~~~~y~~~L~~~~~~ 322 (334)
T d1dcea1 306 DPMRAAYLDDLRSKFLL 322 (334)
T ss_dssp CGGGHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHhH
Confidence 67 45667777665553
No 15
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.74 E-value=7.1e-08 Score=75.68 Aligned_cols=89 Identities=9% Similarity=0.016 Sum_probs=67.3
Q ss_pred HHHHHhcCChHHHHHHHHhC-CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCchH
Q 005732 541 VDLLGRSGHLHEAEEFIKDM-PIEL-DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618 (680)
Q Consensus 541 ~~~~~~~g~~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~ 618 (680)
...+.+.|++++|+..|++. ...| ++..|..++.++...|++++|+..++++++++|+++.+|..++.++...|++++
T Consensus 10 g~~~~~~g~~~eAi~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~ 89 (117)
T d1elwa_ 10 GNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEE 89 (117)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHHHHHccCHHH
Confidence 45666777777777777776 3333 577777777778888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHhhC
Q 005732 619 KMDIRKRLTHL 629 (680)
Q Consensus 619 A~~~~~~~~~~ 629 (680)
|+..+++..+.
T Consensus 90 A~~~~~~a~~~ 100 (117)
T d1elwa_ 90 AKRTYEEGLKH 100 (117)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 88888777654
No 16
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.67 E-value=6e-08 Score=85.14 Aligned_cols=106 Identities=9% Similarity=-0.057 Sum_probs=57.1
Q ss_pred CCHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhC-CCCC-CHHHHHHHHH
Q 005732 497 PNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM-PIEL-DAVVWGALLS 574 (680)
Q Consensus 497 p~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~-~~~p-~~~~~~~l~~ 574 (680)
|+...+......+.+.|++++|+..|+++.... +.+...|..+..+|.+.|++++|+..+++. .+.| +...|..++.
T Consensus 2 ~~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~-p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~ 80 (201)
T d2c2la1 2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 80 (201)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHH
Confidence 455555555555666666666666666555433 224455555555555555555555555554 3334 3445555555
Q ss_pred HHHhcCCHHHHHHHHHHHHcCCCCCCchH
Q 005732 575 ACWFWMNMEVGERAAQKMFGLDKKPISAY 603 (680)
Q Consensus 575 ~~~~~g~~~~a~~~~~~~~~~~p~~~~~~ 603 (680)
++...|++++|+..|+++++++|++...+
T Consensus 81 ~~~~l~~~~~A~~~~~~al~l~p~~~~~~ 109 (201)
T d2c2la1 81 CQLEMESYDEAIANLQRAYSLAKEQRLNF 109 (201)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHCCCHHHHHHHHHHHHHhCcccHHHH
Confidence 55555555555555555555555443333
No 17
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.65 E-value=2.4e-07 Score=72.50 Aligned_cols=106 Identities=11% Similarity=0.021 Sum_probs=84.9
Q ss_pred HHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhC-C-CCCCHHHHHHHHHHHHhcCCH
Q 005732 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM-P-IELDAVVWGALLSACWFWMNM 582 (680)
Q Consensus 505 ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~-~-~~p~~~~~~~l~~~~~~~g~~ 582 (680)
-...+...|++++|+..|+++.+.. +.+...|..+..+|...|++++|++.+++. . .+.++..|..++.++...|++
T Consensus 9 ~g~~~~~~g~~~eAi~~~~~al~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~ 87 (117)
T d1elwa_ 9 KGNKALSVGNIDDALQCYSEAIKLD-PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRF 87 (117)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcC-CcchhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHHHHHccCH
Confidence 3455677788888888888877654 346677888888888888888888888876 3 344788899999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHH
Q 005732 583 EVGERAAQKMFGLDKKPISAYVILSNIYA 611 (680)
Q Consensus 583 ~~a~~~~~~~~~~~p~~~~~~~~l~~~~~ 611 (680)
++|+..++++++.+|+++.++..+..+-.
T Consensus 88 ~~A~~~~~~a~~~~p~~~~~~~~l~~l~~ 116 (117)
T d1elwa_ 88 EEAKRTYEEGLKHEANNPQLKEGLQNMEA 116 (117)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHhC
Confidence 99999999999999999888887776643
No 18
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.64 E-value=1.9e-07 Score=87.14 Aligned_cols=154 Identities=10% Similarity=-0.052 Sum_probs=69.1
Q ss_pred HhcccCChHHHHHHHHHHHhc----CCC-chHhHHHHHHHHHHhcCChHHHHHHHhcCCC-----CC----HHHHHHHHH
Q 005732 407 ACSCLGSLQQGQLLHAHLVKT----PFE-SNVYVGTSLVDMYSRCGSINDAQASFSSISS-----PN----VAAWTALMN 472 (680)
Q Consensus 407 ~~~~~~~~~~a~~~~~~~~~~----~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~-----~~----~~~~~~l~~ 472 (680)
.|...+++++|...|.++.+. +-+ .-..+|..+..+|.+.|++++|.+.++.... .+ ...+..+..
T Consensus 46 ~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~ 125 (290)
T d1qqea_ 46 IYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGE 125 (290)
T ss_dssp HHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHH
Confidence 344455555555555444432 101 1123444455555555555555555544321 11 223334444
Q ss_pred HHHH-cCChhHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCCh------hHHHHH
Q 005732 473 GYSH-HGLGSEAVLLFEIMLEQ----DIVPN-AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTL------EHYTCV 540 (680)
Q Consensus 473 ~~~~-~~~~~~A~~~~~~m~~~----~~~p~-~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~------~~~~~l 540 (680)
.|.. .|++++|++.+++..+. +-.+. ..++..+...+...|++++|.+.++++......... ..+...
T Consensus 126 ~~~~~~~~~~~A~~~~~~A~~l~~~~~~~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (290)
T d1qqea_ 126 ILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKK 205 (290)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHH
T ss_pred hHhhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccchhhhhhHHHHHHHH
Confidence 4432 36666666666555431 11111 233455555566666666666666665532211110 112233
Q ss_pred HHHHHhcCChHHHHHHHHhC
Q 005732 541 VDLLGRSGHLHEAEEFIKDM 560 (680)
Q Consensus 541 ~~~~~~~g~~~~A~~~~~~~ 560 (680)
+..+...|+++.|.+.+++.
T Consensus 206 ~~~~l~~~d~~~A~~~~~~~ 225 (290)
T d1qqea_ 206 GLCQLAATDAVAAARTLQEG 225 (290)
T ss_dssp HHHHHHTTCHHHHHHHHHGG
T ss_pred HHHHHHhccHHHHHHHHHHH
Confidence 33444555666666555554
No 19
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.63 E-value=9.7e-07 Score=76.06 Aligned_cols=140 Identities=12% Similarity=0.005 Sum_probs=102.6
Q ss_pred HHHHHhcCChHHHHHHHhcCCCCCHHHHHHHHHHHHHcCChhHHHHHHHHHHHCCCCCC-HHHHHHHHHHHhccCCHHHH
Q 005732 440 VDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPN-AATFVGVLSACVRAGLVNEG 518 (680)
Q Consensus 440 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~m~~~~~~p~-~~~~~~ll~~~~~~g~~~~A 518 (680)
...+...|+++.|.+.|.++..++...|..+..+|...|++++|++.|++.++. .|+ ...|..+..++.+.|++++|
T Consensus 12 g~~~~~~~d~~~Al~~~~~i~~~~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~l--dp~~~~a~~~~g~~~~~~g~~~~A 89 (192)
T d1hh8a_ 12 GVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINR--DKHLAVAYFQRGMLYYQTEKYDLA 89 (192)
T ss_dssp HHHHHHTTCHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCchhHHHHHHHHHHH--hhhhhhhHHHHHHHHHhhccHHHH
Confidence 445677889999999999888888888888888999999999999999998884 454 67788888888889999999
Q ss_pred HHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhCCCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCC
Q 005732 519 MKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELD-AVVWGALLSACWFWMNMEVGERAAQKMFGLDK 597 (680)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~p~-~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p 597 (680)
.+.|++............| ...| ...+++ ..++..+..++...|++++|.+.+++++++.|
T Consensus 90 ~~~~~kAl~~~~~n~~~~~-------~~~~-----------~~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~ 151 (192)
T d1hh8a_ 90 IKDLKEALIQLRGNQLIDY-------KILG-----------LQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKS 151 (192)
T ss_dssp HHHHHHHHHTTTTCSEEEC-------GGGT-----------BCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCccCchHHH-------HHhh-----------hhcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 8888887643211110000 0000 001111 34556777788899999999999999999988
Q ss_pred CC
Q 005732 598 KP 599 (680)
Q Consensus 598 ~~ 599 (680)
++
T Consensus 152 ~~ 153 (192)
T d1hh8a_ 152 EP 153 (192)
T ss_dssp SG
T ss_pred Cc
Confidence 86
No 20
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=98.60 E-value=5.7e-08 Score=75.49 Aligned_cols=89 Identities=13% Similarity=-0.078 Sum_probs=80.3
Q ss_pred HHHHHHHhcCChHHHHHHHHhC-CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCc
Q 005732 539 CVVDLLGRSGHLHEAEEFIKDM-PIEL-DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKW 616 (680)
Q Consensus 539 ~l~~~~~~~g~~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~ 616 (680)
.+...+.+.|++++|+..+++. ...| ++..|..++.++.+.|++++|+..++++++++|+++.++..++.+|...|++
T Consensus 21 ~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~y~~~g~~ 100 (112)
T d1hxia_ 21 EEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNA 100 (112)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHHHHHCCCH
Confidence 4566788899999999999987 4445 6889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHh
Q 005732 617 GKKMDIRKRLT 627 (680)
Q Consensus 617 ~~A~~~~~~~~ 627 (680)
++|.+.+++..
T Consensus 101 ~~A~~~l~~~l 111 (112)
T d1hxia_ 101 NAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999864
No 21
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.54 E-value=1.6e-07 Score=82.37 Aligned_cols=96 Identities=9% Similarity=-0.010 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHHcCChhHHHHHHHHHHHCCCCC-CHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHH
Q 005732 462 PNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVP-NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540 (680)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l 540 (680)
|+...+......+.+.|++++|+..|+++++. .| +...|..+..+|.+.|++++|+..|+++.+.. +-+...|..+
T Consensus 2 ~~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~--~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~-p~~~~a~~~l 78 (201)
T d2c2la1 2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITR--NPLVAVYYTNRALCYLKMQQPEQALADCRRALELD-GQSVKAHFFL 78 (201)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC-TTCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhC-CCcHHHHHHH
Confidence 55556666677777788888888888777774 34 46667777777778888888888887777543 2246667777
Q ss_pred HHHHHhcCChHHHHHHHHhC
Q 005732 541 VDLLGRSGHLHEAEEFIKDM 560 (680)
Q Consensus 541 ~~~~~~~g~~~~A~~~~~~~ 560 (680)
..+|.+.|++++|+..|+++
T Consensus 79 g~~~~~l~~~~~A~~~~~~a 98 (201)
T d2c2la1 79 GQCQLEMESYDEAIANLQRA 98 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHH
Confidence 77788888888887777765
No 22
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.52 E-value=6.7e-07 Score=74.58 Aligned_cols=117 Identities=6% Similarity=-0.081 Sum_probs=91.8
Q ss_pred HHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhC-CCCC-CHHHHHHHHHHHHhcCCH
Q 005732 505 VLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM-PIEL-DAVVWGALLSACWFWMNM 582 (680)
Q Consensus 505 ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~~~g~~ 582 (680)
....|.+.|++++|+..|+++.+.. +.+...|..+..+|...|++++|++.|+++ ...| +...|..++.++...|++
T Consensus 16 ~gn~~~~~~~y~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~g~~~~~~g~~ 94 (159)
T d1a17a_ 16 QANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKF 94 (159)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHcCCHHHHHHHhhhccccc-hhhhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHHHHHHHHcCCH
Confidence 3456777888888888888888654 336777888888888888888888888877 3344 678899999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHH--hcCCchHHHHH
Q 005732 583 EVGERAAQKMFGLDKKPISAYVILSNIYA--VLGKWGKKMDI 622 (680)
Q Consensus 583 ~~a~~~~~~~~~~~p~~~~~~~~l~~~~~--~~g~~~~A~~~ 622 (680)
++|...++++++++|+++.++..+..+.. ..+.+++|...
T Consensus 95 ~eA~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~~~a~~~ 136 (159)
T d1a17a_ 95 RAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAG 136 (159)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999888877766543 44556666654
No 23
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.52 E-value=6.7e-07 Score=83.29 Aligned_cols=190 Identities=11% Similarity=0.001 Sum_probs=131.4
Q ss_pred HHHHHHHhcCChHHHHHHHhcCCC-----CC----HHHHHHHHHHHHHcCChhHHHHHHHHHHHCCC---CCC--HHHHH
Q 005732 438 SLVDMYSRCGSINDAQASFSSISS-----PN----VAAWTALMNGYSHHGLGSEAVLLFEIMLEQDI---VPN--AATFV 503 (680)
Q Consensus 438 ~l~~~~~~~g~~~~A~~~~~~~~~-----~~----~~~~~~l~~~~~~~~~~~~A~~~~~~m~~~~~---~p~--~~~~~ 503 (680)
.....|...|++++|.+.|.++.+ .+ ..+|..+..+|.+.|++++|++.+++..+.-. .+. ..++.
T Consensus 42 ~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 121 (290)
T d1qqea_ 42 QAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKF 121 (290)
T ss_dssp HHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHH
Confidence 346678899999999999887653 22 35788899999999999999999998765211 111 34566
Q ss_pred HHHHHHh-ccCCHHHHHHHHHHHHhc----CCCC-ChhHHHHHHHHHHhcCChHHHHHHHHhCC-CC---C----C-HHH
Q 005732 504 GVLSACV-RAGLVNEGMKIFRSMKSY----GVVP-TLEHYTCVVDLLGRSGHLHEAEEFIKDMP-IE---L----D-AVV 568 (680)
Q Consensus 504 ~ll~~~~-~~g~~~~A~~~~~~~~~~----~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~-~~---p----~-~~~ 568 (680)
.+...|. ..|++++|++.+++..+. +..+ ...++..+...+...|++++|.+.++++. .. + . ...
T Consensus 122 ~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~~~~~~~~~~ 201 (290)
T d1qqea_ 122 ELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDY 201 (290)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHH
T ss_pred HHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccchhhhhhHHHH
Confidence 6666664 469999999999987632 2111 14457788999999999999999999861 11 1 1 123
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCch-----HHHHHHHHHh--cCCchHHHHHHHHHh
Q 005732 569 WGALLSACWFWMNMEVGERAAQKMFGLDKKPISA-----YVILSNIYAV--LGKWGKKMDIRKRLT 627 (680)
Q Consensus 569 ~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~-----~~~l~~~~~~--~g~~~~A~~~~~~~~ 627 (680)
+...+..+...|+++.|...++++.+.+|..+.. ...++.++.. .+++++|+..++++.
T Consensus 202 ~~~~~~~~l~~~d~~~A~~~~~~~~~~~~~~~~sre~~~l~~l~~a~~~~d~e~~~eai~~y~~~~ 267 (290)
T d1qqea_ 202 FLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFM 267 (290)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHGGGCC---------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSS
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCCccchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 4455556678999999999999999999875433 3445555544 346788888876543
No 24
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.50 E-value=2.8e-07 Score=72.31 Aligned_cols=107 Identities=14% Similarity=0.012 Sum_probs=78.2
Q ss_pred HHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCC---hHHHHHHHHhC-CCCCCH---HHHHHHHHHH
Q 005732 504 GVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGH---LHEAEEFIKDM-PIELDA---VVWGALLSAC 576 (680)
Q Consensus 504 ~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---~~~A~~~~~~~-~~~p~~---~~~~~l~~~~ 576 (680)
.++..+...+++++|.+.|++....+ +.++.++..+..++.+.++ +++|+++++++ ...|++ .++..++.+|
T Consensus 4 ~l~n~~~~~~~l~~Ae~~Y~~aL~~~-p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y 82 (122)
T d1nzna_ 4 AVLNELVSVEDLLKFEKKFQSEKAAG-SVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 45666777778888888888777654 3366677777777776544 44688888876 344433 3677888899
Q ss_pred HhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHH
Q 005732 577 WFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611 (680)
Q Consensus 577 ~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~ 611 (680)
...|++++|+..|+++++++|++..+...+..+..
T Consensus 83 ~~~g~~~~A~~~~~~aL~~~P~~~~A~~l~~~I~~ 117 (122)
T d1nzna_ 83 YRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDK 117 (122)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999777666555443
No 25
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.49 E-value=3.7e-07 Score=76.25 Aligned_cols=91 Identities=16% Similarity=0.146 Sum_probs=83.2
Q ss_pred HHHHHHhcCChHHHHHHHHhC-CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCch
Q 005732 540 VVDLLGRSGHLHEAEEFIKDM-PIEL-DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG 617 (680)
Q Consensus 540 l~~~~~~~g~~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~ 617 (680)
....|.+.|++++|+..|++. ...| +...|..++.++...|++++|+..|+++++++|++..++..++.++...|+++
T Consensus 16 ~gn~~~~~~~y~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~g~~~~~~g~~~ 95 (159)
T d1a17a_ 16 QANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFR 95 (159)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHhhhccccchhhhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHHHHHHHHcCCHH
Confidence 457788999999999999988 3444 78899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCC
Q 005732 618 KKMDIRKRLTHLE 630 (680)
Q Consensus 618 ~A~~~~~~~~~~~ 630 (680)
+|.+.+++.....
T Consensus 96 eA~~~~~~a~~~~ 108 (159)
T d1a17a_ 96 AALRDYETVVKVK 108 (159)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcC
Confidence 9999999998753
No 26
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.48 E-value=2.6e-06 Score=73.31 Aligned_cols=124 Identities=9% Similarity=-0.029 Sum_probs=85.8
Q ss_pred HHHHHhcCCHHHHHHHHHHhccCChhHHHHHHHHHhccCChhhHHHHHhhcCcCCcchhhhHhhhcccCCCChhHHHHHH
Q 005732 291 INGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMI 370 (680)
Q Consensus 291 ~~~~~~~g~~~~a~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li 370 (680)
...+...|+++.|++.|+++..++..+|..+..++...|++++|++.|++..+.+ +.+...|..+.
T Consensus 12 g~~~~~~~d~~~Al~~~~~i~~~~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ld--------------p~~~~a~~~~g 77 (192)
T d1hh8a_ 12 GVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRD--------------KHLAVAYFQRG 77 (192)
T ss_dssp HHHHHHTTCHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------------TTCHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHh--------------hhhhhhHHHHH
Confidence 4556677788888888877777777777788888888888888888888887766 66777888888
Q ss_pred HHHHhCCChHHHHHHHHHHHHCCCCCC---------------hhhHHHHHHHhcccCChHHHHHHHHHHHhcC
Q 005732 371 SGYVQNNLHEKALQLYMTMRKLAIDRT---------------RSTFSVLFHACSCLGSLQQGQLLHAHLVKTP 428 (680)
Q Consensus 371 ~~~~~~~~~~~A~~~~~~m~~~~~~p~---------------~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~ 428 (680)
.+|.+.|++++|++.|++......... ..++..+..++.+.|++++|.+.+....+..
T Consensus 78 ~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~ 150 (192)
T d1hh8a_ 78 MLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMK 150 (192)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhhhcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 888888888888888888765311100 1223344445556666666666666555544
No 27
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=98.44 E-value=1.6e-06 Score=71.39 Aligned_cols=83 Identities=18% Similarity=0.084 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCchHHHHHHHHHhhCCCccCCceeEEEECCeE
Q 005732 567 VVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVKKDPGCSWIELNSRV 646 (680)
Q Consensus 567 ~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (680)
.++..++.++.+.|++++|+..++++++++|.+..+|..++.+|...|++++|...+++..+.
T Consensus 68 ~~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l----------------- 130 (153)
T d2fbna1 68 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASL----------------- 130 (153)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----------------
T ss_pred HHHhhHHHHHHHhcccchhhhhhhccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHh-----------------
Confidence 467778888999999999999999999999999999999999999999999999999998764
Q ss_pred EEEecCCCCCCChhHHHHHHHHHHHHhhh
Q 005732 647 HAFSVEDRNNPNCNVIYATLEHLTANLNS 675 (680)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (680)
+|.+..+...+..+..++++
T Consensus 131 ---------~P~n~~~~~~l~~~~~kl~~ 150 (153)
T d2fbna1 131 ---------NPNNLDIRNSYELCVNKLKE 150 (153)
T ss_dssp ---------STTCHHHHHHHHHHHHHHHH
T ss_pred ---------CCCCHHHHHHHHHHHHHHHH
Confidence 46667777777777777654
No 28
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.43 E-value=2.7e-07 Score=72.36 Aligned_cols=92 Identities=11% Similarity=-0.018 Sum_probs=79.0
Q ss_pred HHHHHHHHhcCChHHHHHHHHhC-CC-CCCHHHHHHHHHHHHhc---CCHHHHHHHHHHHHcCCCCC--CchHHHHHHHH
Q 005732 538 TCVVDLLGRSGHLHEAEEFIKDM-PI-ELDAVVWGALLSACWFW---MNMEVGERAAQKMFGLDKKP--ISAYVILSNIY 610 (680)
Q Consensus 538 ~~l~~~~~~~g~~~~A~~~~~~~-~~-~p~~~~~~~l~~~~~~~---g~~~~a~~~~~~~~~~~p~~--~~~~~~l~~~~ 610 (680)
..+++.+...+++++|.+.|++. .. +.++.++..++.++.+. +++++|+.+++++++.+|.+ ..++..+|.+|
T Consensus 3 ~~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y 82 (122)
T d1nzna_ 3 EAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 45778888999999999999987 33 45789999999998764 45667999999999998876 34789999999
Q ss_pred HhcCCchHHHHHHHHHhhC
Q 005732 611 AVLGKWGKKMDIRKRLTHL 629 (680)
Q Consensus 611 ~~~g~~~~A~~~~~~~~~~ 629 (680)
.+.|++++|++.++++.+.
T Consensus 83 ~~~g~~~~A~~~~~~aL~~ 101 (122)
T d1nzna_ 83 YRLKEYEKALKYVRGLLQT 101 (122)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHh
Confidence 9999999999999999875
No 29
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.42 E-value=1.9e-06 Score=72.53 Aligned_cols=113 Identities=11% Similarity=-0.005 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHhcCCC-CC-------------hhHHHHHHHHHHhcCChHHHHHHHHhC-CCCC
Q 005732 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVV-PT-------------LEHYTCVVDLLGRSGHLHEAEEFIKDM-PIEL 564 (680)
Q Consensus 500 ~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~-~~-------------~~~~~~l~~~~~~~g~~~~A~~~~~~~-~~~p 564 (680)
..+......+.+.|++++|+..|++....-.. +. ..+|+.+..+|.+.|++++|+..+++. ...|
T Consensus 14 ~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~al~~~p 93 (170)
T d1p5qa1 14 TIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDS 93 (170)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhhhhhccc
Confidence 34445556777888888888888877743111 10 122333444444444444444444443 2222
Q ss_pred -CHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHh
Q 005732 565 -DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612 (680)
Q Consensus 565 -~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~ 612 (680)
++..+..++.++...|++++|+..|+++++++|+++.+...+..+..+
T Consensus 94 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 142 (170)
T d1p5qa1 94 NNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR 142 (170)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 344444444444444444444444444444444444444444444433
No 30
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.36 E-value=2.9e-06 Score=71.34 Aligned_cols=58 Identities=2% Similarity=-0.063 Sum_probs=29.6
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhC
Q 005732 502 FVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM 560 (680)
Q Consensus 502 ~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 560 (680)
|..+..+|.+.|++++|+..++...... +.++..+..+..+|...|++++|...|++.
T Consensus 65 ~~nla~~y~k~~~~~~A~~~~~~al~~~-p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a 122 (170)
T d1p5qa1 65 HLNLAMCHLKLQAFSAAIESCNKALELD-SNNEKGLSRRGEAHLAVNDFELARADFQKV 122 (170)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhcccccchhhhhhhcc-ccchhhhHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3334444555555555555555555433 124445555555555555555555555554
No 31
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=98.36 E-value=0.00011 Score=66.69 Aligned_cols=225 Identities=11% Similarity=-0.042 Sum_probs=137.6
Q ss_pred ChhHHHHHHHHHHhCCChHHHHHHHHHHHHCCCCCChhhHHHHHHHhcc----cCChHHHHHHHHHHHhcCCCchHhHHH
Q 005732 362 NPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC----LGSLQQGQLLHAHLVKTPFESNVYVGT 437 (680)
Q Consensus 362 ~~~~~~~li~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~ 437 (680)
|+..+..|...+.+.+++++|+++|++..+.| +...+..+...|.. ..+...+...+....+.+
T Consensus 1 ~p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~g---~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~--------- 68 (265)
T d1ouva_ 1 DPKELVGLGAKSYKEKDFTQAKKYFEKACDLK---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--------- 68 (265)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---------
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc---------
Confidence 35566667777777888888888888887765 33333334444332 334555555555544443
Q ss_pred HHHHHHHhcCChHHHHHHHhcCCCCCHHHHHHHHHHHHH----cCChhHHHHHHHHHHHCCCCCCHHHHHHHHHHH----
Q 005732 438 SLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSH----HGLGSEAVLLFEIMLEQDIVPNAATFVGVLSAC---- 509 (680)
Q Consensus 438 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~---- 509 (680)
+......+...+.. .++.+.|...++...+.|.. .....+...+
T Consensus 69 -------------------------~~~a~~~l~~~~~~~~~~~~~~~~a~~~~~~a~~~g~~---~a~~~l~~~~~~~~ 120 (265)
T d1ouva_ 69 -------------------------YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYA---EGCASLGGIYHDGK 120 (265)
T ss_dssp -------------------------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHCS
T ss_pred -------------------------ccchhhccccccccccccchhhHHHHHHHhhhhhhhhh---hHHHhhcccccCCC
Confidence 12222222222221 34556677777777665522 1122222222
Q ss_pred hccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHh----cCChHHHHHHHHhCCCCCCHHHHHHHHHHHHh----cCC
Q 005732 510 VRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR----SGHLHEAEEFIKDMPIELDAVVWGALLSACWF----WMN 581 (680)
Q Consensus 510 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~p~~~~~~~l~~~~~~----~g~ 581 (680)
........+...+......+ +...+..|...|.. ..+...+...++......++.....+...+.. .++
T Consensus 121 ~~~~~~~~a~~~~~~~~~~~---~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~A~~~lg~~y~~g~~~~~d 197 (265)
T d1ouva_ 121 VVTRDFKKAVEYFTKACDLN---DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKN 197 (265)
T ss_dssp SSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCCC
T ss_pred cccchhHHHHHHhhhhhccc---ccchhhhhhhhhccCCCcccccccchhhhhccccccccccccchhhhcccCcccccc
Confidence 22445666666666665532 45556666666664 44566677777766434467777777766665 568
Q ss_pred HHHHHHHHHHHHcCCCCCCchHHHHHHHHHh----cCCchHHHHHHHHHhhCCC
Q 005732 582 MEVGERAAQKMFGLDKKPISAYVILSNIYAV----LGKWGKKMDIRKRLTHLEV 631 (680)
Q Consensus 582 ~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~~~ 631 (680)
+++|+.+|+++.+.+ ++.++..|+.+|.. ..++++|.+++++..+.|.
T Consensus 198 ~~~A~~~~~~aa~~g--~~~a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~ 249 (265)
T d1ouva_ 198 FKEALARYSKACELE--NGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGA 249 (265)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTC
T ss_pred hhhhhhhHhhhhccc--CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCcC
Confidence 999999999998875 46788899999986 4489999999999888764
No 32
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.26 E-value=2.8e-06 Score=71.53 Aligned_cols=65 Identities=6% Similarity=-0.025 Sum_probs=58.3
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCchHHHHHHHHHhhC
Q 005732 565 DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629 (680)
Q Consensus 565 ~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 629 (680)
....+..+..++.+.|++++|+..++++++++|+++.+|..++.+|...|++++|++.+++..+.
T Consensus 76 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l 140 (169)
T d1ihga1 76 ALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEI 140 (169)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHh
Confidence 45567778888889999999999999999999999999999999999999999999999998874
No 33
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=98.24 E-value=8.6e-06 Score=68.20 Aligned_cols=108 Identities=7% Similarity=0.020 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHhc---CCCCChhHHHHHHHHHHhcCChHHHHHHHHhCCCCCCHHHHHHHHHHH
Q 005732 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSY---GVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDMPIELDAVVWGALLSAC 576 (680)
Q Consensus 500 ~~~~~ll~~~~~~g~~~~A~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~p~~~~~~~l~~~~ 576 (680)
..+......+.+.|++.+|+..|++.... ....+...... ... -...+|..+..++
T Consensus 16 ~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~-----------------~~~----~~~~~~~Nla~~~ 74 (168)
T d1kt1a1 16 AIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKA-----------------SES----FLLAAFLNLAMCY 74 (168)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHH-----------------HHH----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhh-----------------cch----hHHHHHHhHHHHH
Confidence 44555666677777777777777766521 11111100000 000 0012333444445
Q ss_pred HhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCchHHHHHHHHHhh
Q 005732 577 WFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628 (680)
Q Consensus 577 ~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 628 (680)
.+.|++++|+..++++++++|++..++..++.+|...|++++|.+.++++.+
T Consensus 75 ~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~ 126 (168)
T d1kt1a1 75 LKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLE 126 (168)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhhhcccchhhhhhhhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5555555555555555555555555555555555555555555555555543
No 34
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.18 E-value=3e-06 Score=67.26 Aligned_cols=92 Identities=7% Similarity=0.024 Sum_probs=76.0
Q ss_pred HHHHHHHHHhcCChHHHHHHHHhC-CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCch-------HHHHH
Q 005732 537 YTCVVDLLGRSGHLHEAEEFIKDM-PIEL-DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISA-------YVILS 607 (680)
Q Consensus 537 ~~~l~~~~~~~g~~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~-------~~~l~ 607 (680)
+..+...+.+.|++++|++.|++. ...| +...+..+..++...|++++|+..++++++++|+++.. |..++
T Consensus 7 ~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~~~~~lg 86 (128)
T d1elra_ 7 EKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIG 86 (128)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH
Confidence 345667888889999999888877 3344 68889999999999999999999999999999987654 55667
Q ss_pred HHHHhcCCchHHHHHHHHHhh
Q 005732 608 NIYAVLGKWGKKMDIRKRLTH 628 (680)
Q Consensus 608 ~~~~~~g~~~~A~~~~~~~~~ 628 (680)
.++...+++++|++.+++...
T Consensus 87 ~~~~~~~~~~~A~~~~~kal~ 107 (128)
T d1elra_ 87 NSYFKEEKYKDAIHFYNKSLA 107 (128)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHh
Confidence 778888899999999988764
No 35
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.17 E-value=5.9e-06 Score=69.42 Aligned_cols=134 Identities=9% Similarity=-0.044 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHCCCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHH
Q 005732 466 AWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLG 545 (680)
Q Consensus 466 ~~~~l~~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~ 545 (680)
.+......+...|++++|+..|.++++. .+... ......... .. -+.....|..+..++.
T Consensus 29 ~~~~~~~~~~~~~~y~~Ai~~y~~al~~--~~~~~----------~~~~~~~~~-------~~-~~~~~~~~~nla~~~~ 88 (169)
T d1ihga1 29 DLKNIGNTFFKSQNWEMAIKKYTKVLRY--VEGSR----------AAAEDADGA-------KL-QPVALSCVLNIGACKL 88 (169)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH--HHHHH----------HHSCHHHHG-------GG-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh--hhhhh----------hhhhhHHHH-------Hh-ChhhHHHHHHHHHHHH
Confidence 3445566677888888888888877641 11000 000000000 00 0123456677888999
Q ss_pred hcCChHHHHHHHHhC-CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCchHH
Q 005732 546 RSGHLHEAEEFIKDM-PIEL-DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKK 619 (680)
Q Consensus 546 ~~g~~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A 619 (680)
+.|++++|+..++++ ...| ++..|..++.++...|++++|+..|+++++++|+++.+...+..+..+.....++
T Consensus 89 ~~~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~~~~~~l~~~~~~ 164 (169)
T d1ihga1 89 KMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDK 164 (169)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccchhhhhhhhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987 5555 6889999999999999999999999999999999988888888776655444443
No 36
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=98.16 E-value=2.1e-05 Score=65.79 Aligned_cols=141 Identities=10% Similarity=-0.006 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHHHC---CCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHH
Q 005732 464 VAAWTALMNGYSHHGLGSEAVLLFEIMLEQ---DIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCV 540 (680)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~~A~~~~~~m~~~---~~~p~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l 540 (680)
...+......+.+.|++.+|+..|++.... ...++... ......+ ...+|..+
T Consensus 15 a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~-----------------~~~~~~~-------~~~~~~Nl 70 (168)
T d1kt1a1 15 AAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKE-----------------SKASESF-------LLAAFLNL 70 (168)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHH-----------------HHHHHHH-------HHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhh-----------------hhhcchh-------HHHHHHhH
Confidence 345666778899999999999999887651 11111110 0011111 12356667
Q ss_pred HHHHHhcCChHHHHHHHHhC-CC-CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCch-
Q 005732 541 VDLLGRSGHLHEAEEFIKDM-PI-ELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWG- 617 (680)
Q Consensus 541 ~~~~~~~g~~~~A~~~~~~~-~~-~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~- 617 (680)
..+|.+.|++++|+..+++. .. +.+...+..++.++...|++++|+..|+++++++|+++.+...+..+....+...
T Consensus 71 a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~e 150 (168)
T d1kt1a1 71 AMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKAKEHNE 150 (168)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhcccchhhhhhhhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhHHH
Confidence 88899999999999999887 33 4478899999999999999999999999999999999999888888887766554
Q ss_pred HHHHHHHHHhh
Q 005732 618 KKMDIRKRLTH 628 (680)
Q Consensus 618 ~A~~~~~~~~~ 628 (680)
...+++.+|.+
T Consensus 151 ~~kk~~~~~f~ 161 (168)
T d1kt1a1 151 RDRRTYANMFK 161 (168)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 34555555554
No 37
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=98.11 E-value=0.00084 Score=60.57 Aligned_cols=199 Identities=11% Similarity=-0.045 Sum_probs=95.9
Q ss_pred CChhHHHHHHHHHHh----CCChHHHHHHHHHHHHCCCCCChhhHHHHHHH----hcccCChHHHHHHHHHHHhcCCCch
Q 005732 361 RNPVTWNSMISGYVQ----NNLHEKALQLYMTMRKLAIDRTRSTFSVLFHA----CSCLGSLQQGQLLHAHLVKTPFESN 432 (680)
Q Consensus 361 ~~~~~~~~li~~~~~----~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~----~~~~~~~~~a~~~~~~~~~~~~~~~ 432 (680)
-+...+..|...|.. ..++..|...+......+. ......+... .....+.+.|...++...+.|...
T Consensus 32 g~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~~---~~a~~~l~~~~~~~~~~~~~~~~a~~~~~~a~~~g~~~- 107 (265)
T d1ouva_ 32 KENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNY---SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAE- 107 (265)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHH-
T ss_pred CCHHHHHHHHHHHHcCCCcchhHHHHHHhhcccccccc---cchhhccccccccccccchhhHHHHHHHhhhhhhhhhh-
Confidence 355555566666665 5577778888877776552 2222222222 223456677777777777665221
Q ss_pred HhHHHHHHHHHHhcCChHHHHHHHhcCCCCCHHHHHHHHHHHHHcCChhHHHHHHHHHHHCCCCCCHHHHHHHHHHHhc-
Q 005732 433 VYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVR- 511 (680)
Q Consensus 433 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~- 511 (680)
. ...+...+.... ........+...+......+ +...+..|...+..
T Consensus 108 a--~~~l~~~~~~~~---------------------------~~~~~~~~a~~~~~~~~~~~---~~~~~~~L~~~~~~~ 155 (265)
T d1ouva_ 108 G--CASLGGIYHDGK---------------------------VVTRDFKKAVEYFTKACDLN---DGDGCTILGSLYDAG 155 (265)
T ss_dssp H--HHHHHHHHHHCS---------------------------SSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHT
T ss_pred H--HHhhcccccCCC---------------------------cccchhHHHHHHhhhhhccc---ccchhhhhhhhhccC
Confidence 1 111222222100 01122233333333333321 23333333333332
Q ss_pred ---cCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHh----cCChHHHHHHHHhCCCCCCHHHHHHHHHHHHh----cC
Q 005732 512 ---AGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR----SGHLHEAEEFIKDMPIELDAVVWGALLSACWF----WM 580 (680)
Q Consensus 512 ---~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~p~~~~~~~l~~~~~~----~g 580 (680)
..+...+..+++...+.| +......+...|.. ..++++|..+|++....-++..+..|+..+.. .+
T Consensus 156 ~~~~~~~~~~~~~~~~a~~~g---~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~g~~~a~~~LG~~y~~G~g~~~ 232 (265)
T d1ouva_ 156 RGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTR 232 (265)
T ss_dssp SSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSSC
T ss_pred CCcccccccchhhhhcccccc---ccccccchhhhcccCcccccchhhhhhhHhhhhcccCHHHHHHHHHHHHcCCCCcc
Confidence 334444444444444433 23333333333333 34566666666665222345555566665554 33
Q ss_pred CHHHHHHHHHHHHcCCCC
Q 005732 581 NMEVGERAAQKMFGLDKK 598 (680)
Q Consensus 581 ~~~~a~~~~~~~~~~~p~ 598 (680)
+.++|..+|+++.+.++.
T Consensus 233 n~~~A~~~~~kAa~~g~~ 250 (265)
T d1ouva_ 233 NEKQAIENFKKGCKLGAK 250 (265)
T ss_dssp CSTTHHHHHHHHHHHTCH
T ss_pred CHHHHHHHHHHHHHCcCH
Confidence 677788888777766654
No 38
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=98.08 E-value=1.7e-05 Score=65.05 Aligned_cols=128 Identities=9% Similarity=-0.023 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHHHCCCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHH
Q 005732 465 AAWTALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLL 544 (680)
Q Consensus 465 ~~~~~l~~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~ 544 (680)
..+......+.+.|++.+|+..|.++... .|... ............. ....+|..+..+|
T Consensus 18 ~~~~~~G~~~f~~~~y~~A~~~Y~~al~~--~~~~~-----------~~~~~~~~~~~~~-------~~~~~~~Nla~~~ 77 (153)
T d2fbna1 18 FDIKEEGNEFFKKNEINEAIVKYKEALDF--FIHTE-----------EWDDQILLDKKKN-------IEISCNLNLATCY 77 (153)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHT--TTTCT-----------TCCCHHHHHHHHH-------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh--Ccchh-----------hhhhHHHHHhhhh-------HHHHHHhhHHHHH
Confidence 34555667788888888888888888763 11100 0000000000000 1124667788899
Q ss_pred HhcCChHHHHHHHHhC-CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHh
Q 005732 545 GRSGHLHEAEEFIKDM-PIEL-DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612 (680)
Q Consensus 545 ~~~g~~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~ 612 (680)
.+.|++++|++.+++. ...| +...|..++.++...|++++|+..|+++++++|+++.+...+..+..+
T Consensus 78 ~~l~~~~~Al~~~~~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~k 147 (153)
T d2fbna1 78 NKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 147 (153)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHhcccchhhhhhhccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 9999999999999987 4445 789999999999999999999999999999999998887777665443
No 39
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.04 E-value=4.2e-07 Score=91.75 Aligned_cols=110 Identities=9% Similarity=-0.088 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhC-CCCC-CHHHHHHHHHHHH
Q 005732 500 ATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM-PIEL-DAVVWGALLSACW 577 (680)
Q Consensus 500 ~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~ 577 (680)
..+..+...+.+.|+.+.|...++...... ...++..++..+...|++++|...+++. ...| +...|+.|+..+.
T Consensus 121 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~---~~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg~~~~ 197 (497)
T d1ya0a1 121 VKSSQLGIISNKQTHTSAIVKPQSSSCSYI---CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILAS 197 (497)
T ss_dssp ----------------------CCHHHHHH---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHH
T ss_pred HHHHHhHHHHHhCCCHHHHHHHHHHHhCCC---HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 344444555555566666655554444211 1234445555566666666666666655 2333 3455666666666
Q ss_pred hcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHh
Q 005732 578 FWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAV 612 (680)
Q Consensus 578 ~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~ 612 (680)
..|+..+|...|.+++...|..+.++..|+.++.+
T Consensus 198 ~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~~~~ 232 (497)
T d1ya0a1 198 SKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 66666666666666666666655566666555543
No 40
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.99 E-value=0.0043 Score=57.02 Aligned_cols=136 Identities=11% Similarity=0.061 Sum_probs=75.2
Q ss_pred CCchHHHHHHHHhhcCCCHHHHHHHHhhcCCCccchhhHHHHHHHhcCCHHHHHHHHHHhccCChhHHHHHHHHHhccCC
Q 005732 251 FDESIGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQ 330 (680)
Q Consensus 251 ~~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~~~~~~ll~~~~~~~~ 330 (680)
|+..-...+.+.|.+.|.++.|..+|..+. -|..++..+.+.+++..|.+.+.+. .+..+|..+...+.+...
T Consensus 12 ~n~~d~~~i~~~c~~~~lye~A~~lY~~~~-----d~~rl~~~~v~l~~~~~avd~~~k~--~~~~~~k~~~~~l~~~~e 84 (336)
T d1b89a_ 12 PNNAHIQQVGDRCYDEKMYDAAKLLYNNVS-----NFGRLASTLVHLGEYQAAVDGARKA--NSTRTWKEVCFACVDGKE 84 (336)
T ss_dssp C----------------CTTTHHHHHHHTT-----CHHHHHHHHHTTTCHHHHHHHHHHH--TCHHHHHHHHHHHHHTTC
T ss_pred CCcCCHHHHHHHHHHCCCHHHHHHHHHhCC-----CHHHHHHHHHhhccHHHHHHHHHHc--CCHHHHHHHHHHHHhCcH
Confidence 444444556677778888888888887653 3456777777888888877776654 345577777777776655
Q ss_pred hhhHHHHHhhcCcCCcchhhhHhhhcccCCCChhHHHHHHHHHHhCCChHHHHHHHHHHHHCCCCCChhhHHHHHHHhcc
Q 005732 331 VDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSC 410 (680)
Q Consensus 331 ~~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~ 410 (680)
...+.-+ .... ..++.....++..|-..|.+++...++...... -..+...++.++..|++
T Consensus 85 ~~la~i~-----~~~~-------------~~~~d~l~~~v~~ye~~~~~e~Li~~Le~~~~~-~~~~~~~~~~L~~lyak 145 (336)
T d1b89a_ 85 FRLAQMC-----GLHI-------------VVHADELEELINYYQDRGYFEELITMLEAALGL-ERAHMGMFTELAILYSK 145 (336)
T ss_dssp HHHHHHT-----TTTT-------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS-TTCCHHHHHHHHHHHHT
T ss_pred HHHHHHH-----HHHh-------------hcCHHHHHHHHHHHHHcCChHHHHHHHHHHHcC-CccchHHHHHHHHHHHH
Confidence 5443221 1111 223444556777777788888887777766432 23455566677777766
Q ss_pred cC
Q 005732 411 LG 412 (680)
Q Consensus 411 ~~ 412 (680)
.+
T Consensus 146 ~~ 147 (336)
T d1b89a_ 146 FK 147 (336)
T ss_dssp TC
T ss_pred hC
Confidence 54
No 41
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.86 E-value=3.8e-05 Score=64.49 Aligned_cols=110 Identities=9% Similarity=-0.037 Sum_probs=79.0
Q ss_pred HHHHHhccCCHHHHHHHHHHHHhc--CCCCChhHHHHHHHHHHhcCCh-HHHHHHHHhCCCCCCHHHHHHHHHHHHhcCC
Q 005732 505 VLSACVRAGLVNEGMKIFRSMKSY--GVVPTLEHYTCVVDLLGRSGHL-HEAEEFIKDMPIELDAVVWGALLSACWFWMN 581 (680)
Q Consensus 505 ll~~~~~~g~~~~A~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~-~~A~~~~~~~~~~p~~~~~~~l~~~~~~~g~ 581 (680)
........|++++|.+.|.+.... |...... ..+.+ .....-++. .....+..++.++...|+
T Consensus 17 ~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~----------~~~~w~~~~r~~l~~----~~~~a~~~la~~~~~~g~ 82 (179)
T d2ff4a2 17 AGVHAAAAGRFEQASRHLSAALREWRGPVLDDL----------RDFQFVEPFATALVE----DKVLAHTAKAEAEIACGR 82 (179)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGG----------TTSTTHHHHHHHHHH----HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhhCcccccccC----------cchHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCC
Confidence 344667789999999999888853 2110000 00111 000011111 123456778888999999
Q ss_pred HHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCchHHHHHHHHHhh
Q 005732 582 MEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTH 628 (680)
Q Consensus 582 ~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 628 (680)
+++|+..++++++.+|.+...|..++.+|.+.|++++|++.|+++.+
T Consensus 83 ~~~Al~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~ 129 (179)
T d2ff4a2 83 ASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 129 (179)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999754
No 42
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=97.82 E-value=2.9e-05 Score=59.60 Aligned_cols=89 Identities=8% Similarity=0.024 Sum_probs=70.3
Q ss_pred hHHHHHHHhcCCHHHHHHHHHHhcc--C-ChhHHHHHHHHHhccCChhhHHHHHhhcCcCCcchhhhHhhhcccCCCChh
Q 005732 288 NSLINGLISMGRIEDAELIFNRLTE--A-NSISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPV 364 (680)
Q Consensus 288 ~~l~~~~~~~g~~~~a~~~~~~~~~--~-~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 364 (680)
......+.+.|++++|...|++... | +..+|..+..++.+.|++++|+..|++..+.+ |.+..
T Consensus 20 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~--------------p~~~~ 85 (112)
T d1hxia_ 20 MEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLD--------------PKDIA 85 (112)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------------TTCHH
T ss_pred HHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccc--------------ccccc
Confidence 3456667777888888888888766 4 45678888888888888888888888887766 66788
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHH
Q 005732 365 TWNSMISGYVQNNLHEKALQLYMTMR 390 (680)
Q Consensus 365 ~~~~li~~~~~~~~~~~A~~~~~~m~ 390 (680)
.|..+..+|...|++++|++.|++..
T Consensus 86 a~~~la~~y~~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 86 VHAALAVSHTNEHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 88888888888999999988888753
No 43
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.82 E-value=0.012 Score=54.04 Aligned_cols=288 Identities=10% Similarity=0.073 Sum_probs=133.4
Q ss_pred cCccchhhHHHHHhhcCCChhHHHHhhccCCCCChhhHHHHHHHHHcCCChhHHHHHHHHHHhCCCCCCHhhHHHHHHHH
Q 005732 15 ETLIVSTNKAITECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVC 94 (680)
Q Consensus 15 ~~~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~~~~~~~~t~~~ll~~~ 94 (680)
.||..--..++.-|-+.|.++.|..+|..+.. |..++..+.+.+++..|.+++.+.. +..+|..+...|
T Consensus 11 ~~n~~d~~~i~~~c~~~~lye~A~~lY~~~~d-----~~rl~~~~v~l~~~~~avd~~~k~~------~~~~~k~~~~~l 79 (336)
T d1b89a_ 11 GPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSN-----FGRLASTLVHLGEYQAAVDGARKAN------STRTWKEVCFAC 79 (336)
T ss_dssp CC----------------CTTTHHHHHHHTTC-----HHHHHHHHHTTTCHHHHHHHHHHHT------CHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHCCCHHHHHHHHHhCCC-----HHHHHHHHHhhccHHHHHHHHHHcC------CHHHHHHHHHHH
Confidence 35555556677777788888888888765433 6667777777888888777765442 455666666666
Q ss_pred hccCChHHHHHHHHHHHHhCCCCcchhhhhHHHHHHcCCChHHHHHHHhhhcCCchhHHHHHHHHHHhcCChhhHHHHhc
Q 005732 95 AQLNSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFI 174 (680)
Q Consensus 95 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 174 (680)
........+ .+.......++.....++..|-..|.+++...+++.....
T Consensus 80 ~~~~e~~la-----~i~~~~~~~~~d~l~~~v~~ye~~~~~e~Li~~Le~~~~~-------------------------- 128 (336)
T d1b89a_ 80 VDGKEFRLA-----QMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGL-------------------------- 128 (336)
T ss_dssp HHTTCHHHH-----HHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--------------------------
T ss_pred HhCcHHHHH-----HHHHHHhhcCHHHHHHHHHHHHHcCChHHHHHHHHHHHcC--------------------------
Confidence 655544322 1122222333444445566666666666666666654221
Q ss_pred cCCCCCeeeHHHHHHHHHhCCCChHHHHHHHHHHHHcCCCCCCcchHHHHHHHHhccCChhhHHHHHHHHHHhCCCCCch
Q 005732 175 KMPKKDVVVWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARLGAFCEGKVVHGLLIKCGFEFDES 254 (680)
Q Consensus 175 ~~~~~~~~~~~~ll~~~~~~~~~~~~a~~~~~~m~~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 254 (680)
...+...++.++..+++.+ .++..+.+... + +..-...++..|.+.+-++++.-++
T Consensus 129 --~~~~~~~~~~L~~lyak~~--~~kl~e~l~~~---s----~~y~~~k~~~~c~~~~l~~elv~Ly------------- 184 (336)
T d1b89a_ 129 --ERAHMGMFTELAILYSKFK--PQKMREHLELF---W----SRVNIPKVLRAAEQAHLWAELVFLY------------- 184 (336)
T ss_dssp --TTCCHHHHHHHHHHHHTTC--HHHHHHHHHHH---S----TTSCHHHHHHHHHTTTCHHHHHHHH-------------
T ss_pred --CccchHHHHHHHHHHHHhC--hHHHHHHHHhc---c----ccCCHHHHHHHHHHcCChHHHHHHH-------------
Confidence 1234455677777777653 35554444333 1 2233345566666655555444333
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHhhcCCCccchhhHHHHHHHhcCCHHHHHHHHHHhccCChhHHHHHHHHHhccCChhhH
Q 005732 255 IGGALIEFYCGCEAFDGAMRVYDRLENPCLNASNSLINGLISMGRIEDAELIFNRLTEANSISYNSMIKGYAVYGQVDDS 334 (680)
Q Consensus 255 ~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a 334 (680)
.+.|+++.|..+.-.-. ++..-....+..+.+.++.+...+++....+-++...+.++......-+..+.
T Consensus 185 ---------~~~~~~~~A~~~~i~~~-~~~~~~~~f~e~~~k~~N~e~~~~~i~~yL~~~p~~i~~lL~~v~~~~d~~r~ 254 (336)
T d1b89a_ 185 ---------DKYEEYDNAIITMMNHP-TDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRA 254 (336)
T ss_dssp ---------HHTTCHHHHHHHHHHST-TTTCCHHHHHHHHHHCSSTHHHHHHHHHHHHHCGGGHHHHHHHHGGGCCHHHH
T ss_pred ---------HhcCCHHHHHHHHHHcc-hhhhhHHHHHHHHHccCChHHHHHHHHHHHHcCHHHHHHHHHHhccCCCHHHH
Confidence 33444444433322211 11111123333444444444333333333222223334444444444444444
Q ss_pred HHHHhhcCcCCcchhhhHhhhcccCCCChhHHHHHHHHHHhCCChHH
Q 005732 335 KRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEK 381 (680)
Q Consensus 335 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~~~~~ 381 (680)
.+.+++-..-.. ...++.... ...+....+++...|...++++.
T Consensus 255 V~~~~k~~~l~l--i~p~Le~v~-~~n~~~vn~al~~lyie~~d~~~ 298 (336)
T d1b89a_ 255 VNYFSKVKQLPL--VKPYLRSVQ-NHNNKSVNESLNNLFITEEDYQA 298 (336)
T ss_dssp HHHHHHTTCTTT--THHHHHHHH-TTCCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHhcCCcHH--HHHHHHHHH-HcChHHHHHHHHHHHhCcchhHH
Confidence 444443322110 000000000 02245678889999999888654
No 44
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.80 E-value=4.1e-05 Score=56.52 Aligned_cols=72 Identities=14% Similarity=0.069 Sum_probs=54.1
Q ss_pred HHHHHHHhcCChHHHHHHHHhC----C----CCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 005732 539 CVVDLLGRSGHLHEAEEFIKDM----P----IELD-AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNI 609 (680)
Q Consensus 539 ~l~~~~~~~g~~~~A~~~~~~~----~----~~p~-~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~ 609 (680)
.++..+.+.|++++|...|++. + ..++ ..++..++.++.+.|++++|+..++++++++|+++.++..+...
T Consensus 10 ~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~Nl~~~ 89 (95)
T d1tjca_ 10 ELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYF 89 (95)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHHHHHHH
Confidence 4555666666666666666554 0 1222 66788899999999999999999999999999998888887654
Q ss_pred H
Q 005732 610 Y 610 (680)
Q Consensus 610 ~ 610 (680)
.
T Consensus 90 ~ 90 (95)
T d1tjca_ 90 E 90 (95)
T ss_dssp H
T ss_pred H
Confidence 3
No 45
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.75 E-value=5.9e-05 Score=55.64 Aligned_cols=65 Identities=17% Similarity=0.006 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC-------CchHHHHHHHHHhcCCchHHHHHHHHHhhC
Q 005732 565 DAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP-------ISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629 (680)
Q Consensus 565 ~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 629 (680)
++..+..++..+.+.|++++|+..++++++..|.+ +.++..++.++.+.|++++|++.++++.+.
T Consensus 4 saddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l 75 (95)
T d1tjca_ 4 TAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (95)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHh
Confidence 45556678889999999999999999999876554 346889999999999999999999999875
No 46
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.74 E-value=3.5e-05 Score=62.29 Aligned_cols=124 Identities=10% Similarity=-0.045 Sum_probs=70.4
Q ss_pred HHHcCChhHHHHHHHHHHHCCCCCC-HHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHH
Q 005732 474 YSHHGLGSEAVLLFEIMLEQDIVPN-AATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552 (680)
Q Consensus 474 ~~~~~~~~~A~~~~~~m~~~~~~p~-~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 552 (680)
|-+.+.+++|+..|+...+ +.|+ ...+..+..++...+++..+.+ ..+.+++
T Consensus 7 ~~r~~~fe~A~~~~e~al~--~~P~~~~~~~~~g~~l~~~~~~~~~~e-------------------------~~~~~~~ 59 (145)
T d1zu2a1 7 FDRILLFEQIRQDAENTYK--SNPLDADNLTRWGGVLLELSQFHSISD-------------------------AKQMIQE 59 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHHHHHSCHHH-------------------------HHHHHHH
T ss_pred HHHHccHHHHHHHHHHHHh--hCCcchHHHHHHHHHHHHhhhhhhhhH-------------------------HHHHHHH
Confidence 3445567777777777776 3344 4555555555543322211111 1122334
Q ss_pred HHHHHHhC-CCCC-CHHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCchHH
Q 005732 553 AEEFIKDM-PIEL-DAVVWGALLSACWFW-----------MNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKK 619 (680)
Q Consensus 553 A~~~~~~~-~~~p-~~~~~~~l~~~~~~~-----------g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A 619 (680)
|++.+++. .+.| +...|..++.++... +++++|.+.|+++++++|++...+..|+... .|
T Consensus 60 Ai~~~~kAl~l~P~~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~~~L~~~~-------ka 132 (145)
T d1zu2a1 60 AITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTA-------KA 132 (145)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-------TH
T ss_pred HHHHHHHHHHhcchhhHHHhhHHHHHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHHHHHHHHH-------HH
Confidence 44444443 2233 344555555554433 3478899999999999999976666666553 56
Q ss_pred HHHHHHHhhCCC
Q 005732 620 MDIRKRLTHLEV 631 (680)
Q Consensus 620 ~~~~~~~~~~~~ 631 (680)
.+++.+..++|+
T Consensus 133 ~~~~~e~~k~~~ 144 (145)
T d1zu2a1 133 PQLHAEAYKQGL 144 (145)
T ss_dssp HHHHHHHHHSSS
T ss_pred HHHHHHHHHHhc
Confidence 667766666654
No 47
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=97.72 E-value=6.2e-05 Score=61.86 Aligned_cols=64 Identities=19% Similarity=0.095 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC-----------CchHHHHHHHHHhcCCchHHHHHHHHHhhC
Q 005732 566 AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP-----------ISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629 (680)
Q Consensus 566 ~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 629 (680)
...|+.+..++...|++++|...+++++++.|.. ..++..++.+|...|++++|.+.+++..+.
T Consensus 55 a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l 129 (156)
T d2hr2a1 55 AFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEM 129 (156)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCccchhhHhhhhhhhcccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3567788888889999999999999988764431 225788999999999999999999998764
No 48
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.70 E-value=8e-06 Score=82.09 Aligned_cols=202 Identities=9% Similarity=-0.062 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHhcCCCchHhHHHH--HHHHHHhcCChHHHHHHHhcCCC---CCHHHHHHHHHHHHHcCChhHHHHHHHH
Q 005732 415 QQGQLLHAHLVKTPFESNVYVGTS--LVDMYSRCGSINDAQASFSSISS---PNVAAWTALMNGYSHHGLGSEAVLLFEI 489 (680)
Q Consensus 415 ~~a~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~g~~~~A~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 489 (680)
..+.+.++...+....++..-... ....+...+.++.|+..++...+ ++...+..+...+.+.|+.+.|...+..
T Consensus 66 ~~~ie~~r~~~k~~~~~~~~~~~~~~~~~l~~a~~~Y~~ai~~l~~~~~l~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~ 145 (497)
T d1ya0a1 66 KNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSS 145 (497)
T ss_dssp HHHHHHHHHHHSCSSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHTC-------------------------------CCH
T ss_pred HHHHHHHHHhcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChhhHHHHHHhHHHHHhCCCHHHHHHHHHH
Confidence 445566666555433333222221 12223345667888877776654 4556777788888899999999988877
Q ss_pred HHHCCCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhC--CCCCCHH
Q 005732 490 MLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM--PIELDAV 567 (680)
Q Consensus 490 m~~~~~~p~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~--~~~p~~~ 567 (680)
.... .| ..++..+...+...|++++|...|++..+.. +.+...|+.|...+...|+..+|+..|.+. -.+|-+.
T Consensus 146 al~~--~~-~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~-P~~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~ 221 (497)
T d1ya0a1 146 SCSY--IC-QHCLVHLGDIARYRNQTSQAESYYRHAAQLV-PSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPA 221 (497)
T ss_dssp HHHH--HH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHH
T ss_pred HhCC--CH-HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHH
Confidence 6652 22 3567788889999999999999999999764 345788999999999999999999999987 3456788
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC---CchHHHHHHHHHhcCCchHHHHHHHHHh
Q 005732 568 VWGALLSACWFWMNMEVGERAAQKMFGLDKKP---ISAYVILSNIYAVLGKWGKKMDIRKRLT 627 (680)
Q Consensus 568 ~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 627 (680)
.+..|...+.+..+..++ .+..+.. ...+..+...+...+.+++..++.+++.
T Consensus 222 a~~nL~~~~~~~~~~~~~-------~~~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~~~~~ 277 (497)
T d1ya0a1 222 ASTNLQKALSKALESRDE-------VKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLE 277 (497)
T ss_dssp HHHHHHHHHHHHTTSCCC-------CCSSCCHHHHHHHHHHHHHHHHHTCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhh-------hccccccchHHHHHHHHHHHHHhCCchhhHHHHHHHHH
Confidence 888888776543221100 0111111 1134455556667777777666655443
No 49
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.65 E-value=0.00021 Score=56.08 Aligned_cols=58 Identities=14% Similarity=0.025 Sum_probs=35.1
Q ss_pred HHHHHHHHHcCChhHHHHHHHHHHHCCCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005732 468 TALMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMK 526 (680)
Q Consensus 468 ~~l~~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~A~~~~~~~~ 526 (680)
..+...+.+.|++++|+..|.+.++.+. .+...+..+..+|.+.|++++|++.++++.
T Consensus 8 k~~G~~~~~~~~y~~Ai~~y~~al~~~p-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al 65 (128)
T d1elra_ 8 KELGNDAYKKKDFDTALKHYDKAKELDP-TNMTYITNQAAVYFEKGDYNKCRELCEKAI 65 (128)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCc-ccHHHHHhHHHHHHHcCchHHHHHHHHHHH
Confidence 3455566666666666666666666321 135556666666666666666666666655
No 50
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.64 E-value=2e-05 Score=63.86 Aligned_cols=86 Identities=9% Similarity=-0.028 Sum_probs=63.3
Q ss_pred HHhcCChHHHHHHHHhC-CCCC-CHHHHHHHHHHHHh----------cCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHH
Q 005732 544 LGRSGHLHEAEEFIKDM-PIEL-DAVVWGALLSACWF----------WMNMEVGERAAQKMFGLDKKPISAYVILSNIYA 611 (680)
Q Consensus 544 ~~~~g~~~~A~~~~~~~-~~~p-~~~~~~~l~~~~~~----------~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~ 611 (680)
|.+.+.+++|.+.++.. ...| ++..+..++.++.. .+.+++|+..|+++++++|+++.+|..+|.+|.
T Consensus 7 ~~r~~~fe~A~~~~e~al~~~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG~~y~ 86 (145)
T d1zu2a1 7 FDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 86 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHccHHHHHHHHHHHHhhCCcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHHHHHH
Confidence 34455566666666665 2333 56666666665543 345689999999999999999999999999998
Q ss_pred hcCC-----------chHHHHHHHHHhhC
Q 005732 612 VLGK-----------WGKKMDIRKRLTHL 629 (680)
Q Consensus 612 ~~g~-----------~~~A~~~~~~~~~~ 629 (680)
..|+ +++|.+.+++..+.
T Consensus 87 ~~g~~~~~~~~~~~~~~~A~~~~~kal~l 115 (145)
T d1zu2a1 87 SFAFLTPDETEAKHNFDLATQFFQQAVDE 115 (145)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcccchhhHHHHHHhHHHhhhhhhccccc
Confidence 8764 67888888888764
No 51
>d1qsaa1 a.118.5.1 (A:1-450) 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain {Escherichia coli [TaxId: 562]}
Probab=97.53 E-value=0.047 Score=52.93 Aligned_cols=263 Identities=7% Similarity=-0.085 Sum_probs=126.1
Q ss_pred HHHHHHhccCChhhHHHHHhhcCcCCcchhhhHhhhcccCCCChhHHHHHHHHHHhCCChHHHHHHHHHHHHCCCCCChh
Q 005732 320 SMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLAIDRTRS 399 (680)
Q Consensus 320 ~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~~~~~A~~~~~~m~~~~~~p~~~ 399 (680)
..+..+.+.+++......+.. .+.+...-.....+....|+.+.|...+..+-..|..
T Consensus 77 ~~l~~L~~~~~w~~~~~~~~~------------------~p~~~~~~c~~~~A~~~~g~~~~a~~~~~~lW~~~~~---- 134 (450)
T d1qsaa1 77 RFVNELARREDWRGLLAFSPE------------------KPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKS---- 134 (450)
T ss_dssp HHHHHHHHTTCHHHHHHHCCS------------------CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHHSCSSC----
T ss_pred HHHHHHHhccCHHHHHHhccC------------------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCC----
Confidence 345566677777665554432 1445555566777788888888888877776554421
Q ss_pred hHHHHHHHhcccCChHHHHHHHHHHHhcCCCchHhHHHHHHHHHHhcCChHHHHHHHhcCCCCCHHHHHHHHHHHHHcCC
Q 005732 400 TFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVDMYSRCGSINDAQASFSSISSPNVAAWTALMNGYSHHGL 479 (680)
Q Consensus 400 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~l~~~~~~~~~ 479 (680)
..+.+..++..+.+.| ..+...+-.-+......|+...|..+...+...........+.....
T Consensus 135 -------------~p~~c~~l~~~~~~~~-~lt~~~~~~R~~~~l~~~~~~~a~~l~~~l~~~~~~~~~a~~~l~~~--- 197 (450)
T d1qsaa1 135 -------------QPNACDKLFSVWRASG-KQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANN--- 197 (450)
T ss_dssp -------------CCTHHHHHHHHHHHTT-CSCHHHHHHHHHHHHHTTCHHHHHHHHHTCCGGGHHHHHHHHHHHHC---
T ss_pred -------------CchHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCChhhHHHHHhhCChhHHHHHHHHHHHHhC---
Confidence 1122233444444443 23333333334445555667777766666554443333333333222
Q ss_pred hhHHHHHHHHHHHCCCCCCHHHHHHHHHHHhc--cCCHHHHHHHHHHHHhcCCCCChhHHH----HHHHHHHhcCChHHH
Q 005732 480 GSEAVLLFEIMLEQDIVPNAATFVGVLSACVR--AGLVNEGMKIFRSMKSYGVVPTLEHYT----CVVDLLGRSGHLHEA 553 (680)
Q Consensus 480 ~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~--~g~~~~A~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~g~~~~A 553 (680)
...+.... .. ..++......+..++.+ ..+.+.|..++......... +..-+. .+...+...+..+.+
T Consensus 198 p~~~~~~~---~~--~~~~~~~~~~~~~~l~rla~~d~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~a 271 (450)
T d1qsaa1 198 PNTVLTFA---RT--TGATDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQL-NEDQIQELRDIVAWRLMGNDVTDEQ 271 (450)
T ss_dssp GGGHHHHH---HH--SCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHTSCSTTCCHHH
T ss_pred hHhHHHHH---hc--CCCChhhhHHHHHHHHHHhccChhHHHHHHHhhhhcccc-cHHHHHHHHHHHHHHHHHcCchHHH
Confidence 22222111 11 11222222222222222 24566666666665532211 111111 111222234455555
Q ss_pred HHHHHhC-CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCchHHHHHHHHHh
Q 005732 554 EEFIKDM-PIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLT 627 (680)
Q Consensus 554 ~~~~~~~-~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 627 (680)
...+... ....+.......+......+++..+...++.+-......+...+-++..+...|+.++|...+..+.
T Consensus 272 ~~~~~~~~~~~~~~~~~~w~~~~al~~~~~~~~~~~~~~l~~~~~~~~r~~YW~gRa~~~~G~~~~A~~~~~~~a 346 (450)
T d1qsaa1 272 AKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLM 346 (450)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhhcccccchHHHHHHHHHHHHcCChHHHHHHHHhcCcccccHHHHHHHHHHHHHHcCChhhHHHHHHHHh
Confidence 5555544 1223333333344444455666666666655433222223445666666777777777766666654
No 52
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=97.42 E-value=0.00023 Score=63.72 Aligned_cols=127 Identities=9% Similarity=-0.079 Sum_probs=84.9
Q ss_pred HHHcCChhHHHHHHHHHHHCCCCC-CHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHH
Q 005732 474 YSHHGLGSEAVLLFEIMLEQDIVP-NAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHE 552 (680)
Q Consensus 474 ~~~~~~~~~A~~~~~~m~~~~~~p-~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 552 (680)
..+.|++++|+..+++.++.. | |...+..+...++..|++++|.+.++...+.... +...+..+...+...+..++
T Consensus 6 aL~~G~l~eAl~~l~~al~~~--P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~-~~~~~~~l~~ll~a~~~~~~ 82 (264)
T d1zbpa1 6 ALSEGQLQQALELLIEAIKAS--PKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPE-YLPGASQLRHLVKAAQARKD 82 (264)
T ss_dssp HTTTTCHHHHHHHHHHHHHTC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGG-GHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHhccccHH
Confidence 346788999999999988853 4 5778888888899999999999999988865322 34444444455544444444
Q ss_pred HHHHHHhC--CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchH
Q 005732 553 AEEFIKDM--PIELD-AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603 (680)
Q Consensus 553 A~~~~~~~--~~~p~-~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~ 603 (680)
+..-.... ...|+ ...+...+..+...|+.++|...++++.+..|..+..+
T Consensus 83 a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~~~~~ 136 (264)
T d1zbpa1 83 FAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFLA 136 (264)
T ss_dssp HTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCCEEE
T ss_pred HHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCccc
Confidence 33322221 12232 33334445556778999999999999999988876654
No 53
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.32 E-value=0.00056 Score=57.10 Aligned_cols=71 Identities=15% Similarity=0.283 Sum_probs=54.0
Q ss_pred hHHHHHHHHHhccCChhhHHHHHhhcCcCCcchhhhHhhhcccCCCChhHHHHHHHHHHhCCChHHHHHHHHHHHH----
Q 005732 316 ISYNSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRK---- 391 (680)
Q Consensus 316 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~~~~~A~~~~~~m~~---- 391 (680)
..+..+..++...|++++|...++++...+ +.+...|..++.+|.+.|+..+|++.|+++..
T Consensus 68 ~a~~~la~~~~~~g~~~~Al~~~~~al~~~--------------P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~ 133 (179)
T d2ff4a2 68 LAHTAKAEAEIACGRASAVIAELEALTFEH--------------PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLAD 133 (179)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------------TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCchHHHHHHHHHHHhC--------------CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 456667777888888888888888887776 67778888888888888888888888887643
Q ss_pred -CCCCCChhh
Q 005732 392 -LAIDRTRST 400 (680)
Q Consensus 392 -~~~~p~~~~ 400 (680)
.|+.|+..+
T Consensus 134 eLG~~P~~~l 143 (179)
T d2ff4a2 134 DLGIDPGPTL 143 (179)
T ss_dssp HHSCCCCHHH
T ss_pred HhCCCcCHHH
Confidence 467776544
No 54
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=97.20 E-value=0.0017 Score=52.89 Aligned_cols=64 Identities=9% Similarity=-0.114 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHhC--------CCCCC-----HHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Q 005732 536 HYTCVVDLLGRSGHLHEAEEFIKDM--------PIELD-----AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKP 599 (680)
Q Consensus 536 ~~~~l~~~~~~~g~~~~A~~~~~~~--------~~~p~-----~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~ 599 (680)
+|+.+..+|...|++++|.+.+++. ...++ ...+..++.++...|++++|+..|++++++.|+.
T Consensus 57 ~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~ 133 (156)
T d2hr2a1 57 CHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 133 (156)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCccchhhHhhhhhhhcccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 4555556666666666665555543 11221 2356778888999999999999999999987654
No 55
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=97.11 E-value=0.00024 Score=63.61 Aligned_cols=121 Identities=9% Similarity=0.064 Sum_probs=88.4
Q ss_pred HhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHHHHHHHhC-CCCCC-HHHHHHHHHHHHhcCCHHHHH
Q 005732 509 CVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEAEEFIKDM-PIELD-AVVWGALLSACWFWMNMEVGE 586 (680)
Q Consensus 509 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~-~~~p~-~~~~~~l~~~~~~~g~~~~a~ 586 (680)
..+.|++++|+..+++.++.. +.+...+..++..|+..|++++|.+.++.. ...|+ ...+..+...+...+..+++.
T Consensus 6 aL~~G~l~eAl~~l~~al~~~-P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~~~a~ 84 (264)
T d1zbpa1 6 ALSEGQLQQALELLIEAIKAS-PKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARKDFA 84 (264)
T ss_dssp HTTTTCHHHHHHHHHHHHHTC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHCCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhccccHHHH
Confidence 456799999999999999765 447889999999999999999999999988 45664 555555555555454444443
Q ss_pred HHHHHHHc-CCCCCCchHHHHHHHHHhcCCchHHHHHHHHHhhCC
Q 005732 587 RAAQKMFG-LDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLE 630 (680)
Q Consensus 587 ~~~~~~~~-~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 630 (680)
........ .+|++...+...+..+...|++++|.+.++++.+..
T Consensus 85 ~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~ 129 (264)
T d1zbpa1 85 QGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELR 129 (264)
T ss_dssp TSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC
Confidence 33222222 223333445666788899999999999999988754
No 56
>d1qsaa1 a.118.5.1 (A:1-450) 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain {Escherichia coli [TaxId: 562]}
Probab=97.06 E-value=0.15 Score=49.17 Aligned_cols=259 Identities=11% Similarity=-0.013 Sum_probs=139.5
Q ss_pred HHhhcCCChhHHHHhhccCCCCChhhHHHHHHHHHcCCChhHHHHHHHHHHhCCCCCCHhhHHHHHHHHhccCChHHHHH
Q 005732 26 TECGRNGQLVTARNLFDQMPIRTVVSWNTMLCGYSKWAKFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQ 105 (680)
Q Consensus 26 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~m~~~~~~~~~~t~~~ll~~~~~~~~~~~a~~ 105 (680)
..+.+.++++.....+...+ .+...-.....+....|+...|...+..+...|.. .+.....+
T Consensus 80 ~~L~~~~~w~~~~~~~~~~p-~~~~~~c~~~~A~~~~g~~~~a~~~~~~lW~~~~~-~p~~c~~l--------------- 142 (450)
T d1qsaa1 80 NELARREDWRGLLAFSPEKP-GTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKS-QPNACDKL--------------- 142 (450)
T ss_dssp HHHHHTTCHHHHHHHCCSCC-SSHHHHHHHHHHHHHTTCHHHHHHHHHHHHSCSSC-CCTHHHHH---------------
T ss_pred HHHHhccCHHHHHHhccCCC-CCHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCC-CchHHHHH---------------
Confidence 34455555555544443222 13333334455555566666665555555444311 11112222
Q ss_pred HHHHHHHhCCCCcchhhhhHHHHHHcCCChHHHHHHHhhhcCCchhHHHHHHHHHHhcCChhhHHHHhccCCCCCeeeHH
Q 005732 106 IHCLVLKSGYECFEFVGSGLLFFYANCFEIEEAKRVFDELHEDNELLWSLMLVGYVQCNLMSDAFDVFIKMPKKDVVVWT 185 (680)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 185 (680)
+..+.+.| ..+...+-..+......|+...|..+...+...........+........+. ....... .+.....
T Consensus 143 -~~~~~~~~-~lt~~~~~~R~~~~l~~~~~~~a~~l~~~l~~~~~~~~~a~~~l~~~p~~~~---~~~~~~~-~~~~~~~ 216 (450)
T d1qsaa1 143 -FSVWRASG-KQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANNPNTVL---TFARTTG-ATDFTRQ 216 (450)
T ss_dssp -HHHHHHTT-CSCHHHHHHHHHHHHHTTCHHHHHHHHHTCCGGGHHHHHHHHHHHHCGGGHH---HHHHHSC-CCHHHHH
T ss_pred -HHHHHhcC-CCCHHHHHHHHHHHHHcCChhhHHHHHhhCChhHHHHHHHHHHHHhChHhHH---HHHhcCC-CChhhhH
Confidence 22222222 2233333345555666678888888877766555444555555443333332 2222222 2222222
Q ss_pred HHHHHHHh--CCCChHHHHHHHHHHHHcCCCCCCcchHHHHH----HHHhccCChhhHHHHHHHHHHhCCCCCchHHHHH
Q 005732 186 KLISGYAK--SVDGCEKALKLFRWMRESGENMPNEYTFDSVI----RACARLGAFCEGKVVHGLLIKCGFEFDESIGGAL 259 (680)
Q Consensus 186 ~ll~~~~~--~~~~~~~a~~~~~~m~~~~~~~p~~~~~~~ll----~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 259 (680)
.+..++.+ ..+ .+.+..++......... +......+- ......+..+.+...+......+ .+.....-.
T Consensus 217 ~~~~~l~rla~~d-~~~a~~~l~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~w~ 291 (450)
T d1qsaa1 217 MAAVAFASVARQD-AENARLMIPSLAQAQQL--NEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRS--QSTSLIERR 291 (450)
T ss_dssp HHHHHHHHHHHHC-HHHHHHHHHHHHHHTTC--CHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTC--CCHHHHHHH
T ss_pred HHHHHHHHHhccC-hhHHHHHHHhhhhcccc--cHHHHHHHHHHHHHHHHHcCchHHHHHHHHhhcccc--cchHHHHHH
Confidence 22222222 134 78888888887765433 222222222 22234566677777777665553 344444556
Q ss_pred HHHhhcCCCHHHHHHHHhhcCC---CccchhhHHHHHHHhcCCHHHHHHHHHHhcc
Q 005732 260 IEFYCGCEAFDGAMRVYDRLEN---PCLNASNSLINGLISMGRIEDAELIFNRLTE 312 (680)
Q Consensus 260 i~~~~~~g~~~~A~~~~~~~~~---~~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~ 312 (680)
+......+++..+...++.+.+ ....+..-+..++...|+.+.|...|.....
T Consensus 292 ~~~al~~~~~~~~~~~~~~l~~~~~~~~r~~YW~gRa~~~~G~~~~A~~~~~~~a~ 347 (450)
T d1qsaa1 292 VRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (450)
T ss_dssp HHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHcCChHHHHHHHHhcCcccccHHHHHHHHHHHHHHcCChhhHHHHHHHHhc
Confidence 6666778999999999998872 2234456678899999999999999998876
No 57
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.67 E-value=0.0052 Score=46.20 Aligned_cols=66 Identities=8% Similarity=-0.071 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHHHhc---CCHHHHHHHHHHHHcCCCCC-CchHHHHHHHHHhcCCchHHHHHHHHHhhC
Q 005732 564 LDAVVWGALLSACWFW---MNMEVGERAAQKMFGLDKKP-ISAYVILSNIYAVLGKWGKKMDIRKRLTHL 629 (680)
Q Consensus 564 p~~~~~~~l~~~~~~~---g~~~~a~~~~~~~~~~~p~~-~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 629 (680)
|+..+-....+++.++ .+.++|+.+++++++.+|.+ ...++.|+.+|.+.|++++|.+.++++++.
T Consensus 33 ~s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~i 102 (124)
T d2pqrb1 33 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 102 (124)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcc
Confidence 4455555555555543 23456666666666666544 245566666666666666666666666553
No 58
>d1wy6a1 a.118.20.1 (A:7-167) Hypothetical protein ST1625 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=96.25 E-value=0.063 Score=39.56 Aligned_cols=141 Identities=10% Similarity=0.000 Sum_probs=98.8
Q ss_pred HHHcCChhHHHHHHHHHHHCCCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcCChHHH
Q 005732 474 YSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSGHLHEA 553 (680)
Q Consensus 474 ~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 553 (680)
+.-.|..++..+++.+.... .+..-|+-++--....-+-+...+.++.+=+ ..| ...++++...
T Consensus 12 ~ildG~ve~Gveii~k~~~s---s~~~E~NW~ICNiidt~dC~~v~~~Ld~IG~---~FD----------ls~C~Nlk~v 75 (161)
T d1wy6a1 12 FLLDGYIDEGVKIVLEITKS---STKSEYNWFICNLLESIDCRYMFQVLDKIGS---YFD----------LDKCQNLKSV 75 (161)
T ss_dssp HHHTTCHHHHHHHHHHHHHH---SCHHHHTHHHHHHHHHCCHHHHHHHHHHHGG---GSC----------GGGCSCTHHH
T ss_pred HHHhhhHHhHHHHHHHHccc---CCccccceeeeecccccchHHHHHHHHHHhh---hcC----------chhhhcHHHH
Confidence 34567788888888887763 2455566666555555555555555554432 111 2234555555
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCchHHHHHHHHHhhCCCc
Q 005732 554 EEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGKKMDIRKRLTHLEVK 632 (680)
Q Consensus 554 ~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~ 632 (680)
...+-.+. .+...++..+..+..+|.-++-..+++.+++.+.-+|+....++.+|.+.|...++.+++.+.=++|++
T Consensus 76 v~C~~~~n--~~se~vdlALd~lv~~~kkd~Ld~i~~~l~kn~~i~~~~llkia~A~kkig~~re~nell~~ACe~G~K 152 (161)
T d1wy6a1 76 VECGVINN--TLNEHVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKGEK 152 (161)
T ss_dssp HHHHHHTT--CCCHHHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHhc--chHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhHH
Confidence 55555553 345566777788889999999999999988877777899999999999999999999999999888864
No 59
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=95.93 E-value=0.028 Score=43.63 Aligned_cols=49 Identities=12% Similarity=0.117 Sum_probs=30.7
Q ss_pred CCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHh----cCCchHHHHHHHHHhhCC
Q 005732 580 MNMEVGERAAQKMFGLDKKPISAYVILSNIYAV----LGKWGKKMDIRKRLTHLE 630 (680)
Q Consensus 580 g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~~ 630 (680)
.|.++|..+|+++.+.+ ++.+...|+.+|.. ..+.++|.+++++..+.|
T Consensus 73 ~d~~~A~~~~~~aa~~g--~~~a~~~Lg~~y~~G~gv~~d~~~A~~~~~~Aa~~G 125 (133)
T d1klxa_ 73 KDLRKAAQYYSKACGLN--DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 125 (133)
T ss_dssp CCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHhhhhccC--cchHHHHHHHHHHcCCccCCCHHHHHHHHHHHHHCC
Confidence 45666777777766543 34556666666665 346667777777766655
No 60
>d1wy6a1 a.118.20.1 (A:7-167) Hypothetical protein ST1625 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=95.92 E-value=0.13 Score=37.81 Aligned_cols=61 Identities=11% Similarity=0.107 Sum_probs=30.0
Q ss_pred HHHHHHHhccCChhhHHHHHhhcCcCCcchhhhHhhhcccCCCChhHHHHHHHHHHhCCChHHHHHHHHHHHHCC
Q 005732 319 NSMIKGYAVYGQVDDSKRLFEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMTMRKLA 393 (680)
Q Consensus 319 ~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~~~~~A~~~~~~m~~~~ 393 (680)
...+..+..+|+-+...+++..+.+.+ ++++...-.+..+|-+.|...++-+++.+.-+.|
T Consensus 90 dlALd~lv~~~kkd~Ld~i~~~l~kn~--------------~i~~~~llkia~A~kkig~~re~nell~~ACe~G 150 (161)
T d1wy6a1 90 NKALDILVIQGKRDKLEEIGREILKNN--------------EVSASILVAIANALRRVGDERDATTLLIEACKKG 150 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHC--C--------------CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhcC--------------CCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHh
Confidence 334444455555555555555544433 4445555555555555555555555555555444
No 61
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=95.57 E-value=0.1 Score=40.30 Aligned_cols=113 Identities=9% Similarity=-0.070 Sum_probs=78.5
Q ss_pred CChhHHHHHHHHHHHCCCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHh----cCChHHH
Q 005732 478 GLGSEAVLLFEIMLEQDIVPNAATFVGVLSACVRAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGR----SGHLHEA 553 (680)
Q Consensus 478 ~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A 553 (680)
.++++|+++|++..+.|- |. ....|. .....+.++|.+++++..+.| ++.....|...|.. ..+.++|
T Consensus 7 kd~~~A~~~~~kaa~~g~-~~--a~~~l~--~~~~~~~~~a~~~~~~aa~~g---~~~a~~~Lg~~y~~g~~~~~d~~~A 78 (133)
T d1klxa_ 7 KDLKKAIQYYVKACELNE-MF--GCLSLV--SNSQINKQKLFQYLSKACELN---SGNGCRFLGDFYENGKYVKKDLRKA 78 (133)
T ss_dssp HHHHHHHHHHHHHHHTTC-TT--HHHHHH--TCTTSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred cCHHHHHHHHHHHHHCCC-hh--hhhhhc--cccccCHHHHHHHHhhhhccc---chhhhhhHHHhhhhccccchhhHHH
Confidence 357788888888888762 22 222232 344567889999998888766 44555556666654 4578899
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHcCCCC
Q 005732 554 EEFIKDMPIELDAVVWGALLSACWF----WMNMEVGERAAQKMFGLDKK 598 (680)
Q Consensus 554 ~~~~~~~~~~p~~~~~~~l~~~~~~----~g~~~~a~~~~~~~~~~~p~ 598 (680)
.++|++....-++.....|...|.. ..|.++|..+|+++.+.+..
T Consensus 79 ~~~~~~aa~~g~~~a~~~Lg~~y~~G~gv~~d~~~A~~~~~~Aa~~G~~ 127 (133)
T d1klxa_ 79 AQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSE 127 (133)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHhhhhccCcchHHHHHHHHHHcCCccCCCHHHHHHHHHHHHHCCCH
Confidence 9999987434456666777777665 46899999999998877654
No 62
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.86 E-value=0.14 Score=38.20 Aligned_cols=72 Identities=11% Similarity=0.041 Sum_probs=49.8
Q ss_pred CChhHHHHHHHHHHhcC---ChHHHHHHHHhC-CCCC-C-HHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchH
Q 005732 532 PTLEHYTCVVDLLGRSG---HLHEAEEFIKDM-PIEL-D-AVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAY 603 (680)
Q Consensus 532 ~~~~~~~~l~~~~~~~g---~~~~A~~~~~~~-~~~p-~-~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~ 603 (680)
++..+--.+..++.++. +..+++.++++. ...| + ...+..|..+|.+.|++++|..+++++++.+|++..+.
T Consensus 33 ~s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~ 110 (124)
T d2pqrb1 33 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 110 (124)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHH
Confidence 44444444555555543 345667777665 2233 3 35667788889999999999999999999999996554
No 63
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=82.57 E-value=2.7 Score=29.08 Aligned_cols=61 Identities=13% Similarity=0.084 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHHhCCCCCCHhhHHHHHHHHhccCChHHHHHHHHHHHHhCCCCcchhhhhHH
Q 005732 65 FDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSGYECFEFVGSGLL 126 (680)
Q Consensus 65 ~~~a~~~~~~m~~~~~~~~~~t~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 126 (680)
.=++..-++.+....+-|++....+.+++|.+.+|+..|.++++.+.... .++..+|..++
T Consensus 22 ~we~rrgmN~l~~~DlVPeP~Ii~aALrAcRRvND~alAVR~lE~vK~K~-~~~k~~y~yil 82 (105)
T d1v54e_ 22 AWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKA-GPHKEIYPYVI 82 (105)
T ss_dssp HHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-TTCTTHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHh-cCcHHHHHHHH
Confidence 33556666677777788888888888888888888888888888776432 22334444433
No 64
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=80.50 E-value=6.3 Score=27.25 Aligned_cols=63 Identities=6% Similarity=0.005 Sum_probs=45.6
Q ss_pred ChHHHHHHHHHHHHCCCCCChhhHHHHHHHhcccCChHHHHHHHHHHHhcCCCchHhHHHHHHH
Q 005732 378 LHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLGSLQQGQLLHAHLVKTPFESNVYVGTSLVD 441 (680)
Q Consensus 378 ~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~ 441 (680)
+.-++.+-++.+....+.|++....+.+++|.+.+++..|.++++.++... .++...|..+++
T Consensus 21 D~we~rrgmN~l~~~DlVPeP~Ii~aALrAcRRvND~alAVR~lE~vK~K~-~~~k~~y~yilq 83 (105)
T d1v54e_ 21 DAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKA-GPHKEIYPYVIQ 83 (105)
T ss_dssp CHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-TTCTTHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHh-cCcHHHHHHHHH
Confidence 344666667777777888899889999999999999999999888877543 223445555443
No 65
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=48.20 E-value=21 Score=26.23 Aligned_cols=61 Identities=10% Similarity=0.183 Sum_probs=45.3
Q ss_pred hhHHHHHhhcCCChhHHHHhhccCCCCC---hhhHHHHHHHHHcCCChh--HHHHHHHHHHhCCCC
Q 005732 21 TNKAITECGRNGQLVTARNLFDQMPIRT---VVSWNTMLCGYSKWAKFD--ESLSLVSTMHRSNVK 81 (680)
Q Consensus 21 ~~~li~~~~~~g~~~~A~~~~~~~~~~~---~~~~~~ll~~~~~~~~~~--~a~~~~~~m~~~~~~ 81 (680)
...++.-|...|+.++|.+.++++..|. ...+..+..++-+.+.-. .+..++..+...|+-
T Consensus 10 ~~~ll~EY~~~~D~~Ea~~~l~eL~~p~~~~e~V~~~i~~ale~~~~~r~~~~~~Ll~~L~~~~~i 75 (129)
T d2nsza1 10 IDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTI 75 (129)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHcCCchhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHCCCC
Confidence 4678899999999999999999987663 345666666666665543 356788999888744
No 66
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.18 E-value=72 Score=25.10 Aligned_cols=26 Identities=15% Similarity=0.298 Sum_probs=14.6
Q ss_pred HHHHHHHHhcCChhhHHHHhccCCCC
Q 005732 154 SLMLVGYVQCNLMSDAFDVFIKMPKK 179 (680)
Q Consensus 154 ~~l~~~~~~~~~~~~A~~~~~~~~~~ 179 (680)
..++.-|...++.++|...++++..|
T Consensus 14 ~~il~Ey~~~~D~~Ea~~~l~el~~p 39 (193)
T d1ug3a1 14 KAIIEEYLHLNDMKEAVQCVQELASP 39 (193)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHTTCCG
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCc
Confidence 34455555556666666666655544
No 67
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=39.13 E-value=96 Score=25.38 Aligned_cols=48 Identities=6% Similarity=-0.101 Sum_probs=28.3
Q ss_pred cCccchhhHHHHHhhcCCChhHHHHhhcc-CCCCChhhHHHHHHHHHcCC
Q 005732 15 ETLIVSTNKAITECGRNGQLVTARNLFDQ-MPIRTVVSWNTMLCGYSKWA 63 (680)
Q Consensus 15 ~~~~~~~~~li~~~~~~g~~~~A~~~~~~-~~~~~~~~~~~ll~~~~~~~ 63 (680)
.||+.+-..-+..+...|.. ++...+.+ +..+|...-...+.++...+
T Consensus 30 d~~~~vR~~A~~~L~~~~~~-~~~~~l~~~l~d~~~~vr~~a~~aL~~l~ 78 (276)
T d1oyza_ 30 DHNSLKRISSARVLQLRGGQ-DAVRLAIEFCSDKNYIRRDIGAFILGQIK 78 (276)
T ss_dssp CSSHHHHHHHHHHHHHHCCH-HHHHHHHHHHTCSSHHHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHhhCCH-hHHHHHHHHHcCCCHHHHHHHHHHHHHhc
Confidence 46666766777777777763 44443333 34566665555666665554
No 68
>d3bqoa1 a.146.1.1 (A:62-265) TRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.88 E-value=94 Score=24.31 Aligned_cols=49 Identities=16% Similarity=0.133 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCCCCCHHH-------HHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Q 005732 551 HEAEEFIKDMPIELDAVV-------WGALLSACWFWMNMEVGERAAQKMFGLDKKP 599 (680)
Q Consensus 551 ~~A~~~~~~~~~~p~~~~-------~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~ 599 (680)
+.|+.+|+.++..++... -...+..|.+.|.+++|.+++++..+..+.+
T Consensus 91 ESAl~v~~~I~~E~d~l~e~i~~lik~qAV~vCmekg~fk~A~eilkr~f~~~~~~ 146 (204)
T d3bqoa1 91 ESALMIWGSIEKEHDKLHEEIQNLIKIQAIAVCMENGNFKEAEEVFERIFGDPNSH 146 (204)
T ss_dssp HHHHHHHTTSCSCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC-----C
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCc
Confidence 456666666644444211 1223345667778888888887766644434
No 69
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.67 E-value=59 Score=25.67 Aligned_cols=61 Identities=8% Similarity=0.017 Sum_probs=39.9
Q ss_pred hhHHHHHhhcCCChhHHHHhhccCCCCCh---hhHHHHHHHHHcCC-ChhHHHHHHHHHHhCCCC
Q 005732 21 TNKAITECGRNGQLVTARNLFDQMPIRTV---VSWNTMLCGYSKWA-KFDESLSLVSTMHRSNVK 81 (680)
Q Consensus 21 ~~~li~~~~~~g~~~~A~~~~~~~~~~~~---~~~~~ll~~~~~~~-~~~~a~~~~~~m~~~~~~ 81 (680)
...++.-|...|+.++|...+++++.|.. .....+..++-+.. ..+.+..++..+...|+-
T Consensus 13 ~~~il~Ey~~~~D~~Ea~~~l~el~~p~~~~~~V~~~i~~~le~~~~~re~~~~Ll~~L~~~~~i 77 (193)
T d1ug3a1 13 SKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGVESTLERSAIAREHMGQLLHQLLCAGHL 77 (193)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHTTCCGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHcCCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHCCCC
Confidence 46788899999999999999999987742 23333333332211 234566677777777643
No 70
>d1oaia_ a.5.2.3 (A:) FG-binding, C-terminal domain of TAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.94 E-value=28 Score=21.29 Aligned_cols=27 Identities=11% Similarity=0.127 Sum_probs=20.4
Q ss_pred HhCCCChHHHHHHHHHHHHcCCCCCCc
Q 005732 192 AKSVDGCEKALKLFRWMRESGENMPNE 218 (680)
Q Consensus 192 ~~~~~~~~~a~~~~~~m~~~~~~~p~~ 218 (680)
..++-+++.|...|.++...|-.||+.
T Consensus 30 e~~~Wd~~~A~~~F~~l~~~~~IP~eA 56 (59)
T d1oaia_ 30 QDNNWDYTRSAQAFTHLKAKGEIPEVA 56 (59)
T ss_dssp HHTTTCHHHHHHHHHHHHHTTCSCGGG
T ss_pred HHcCCCHHHHHHHHHHHHhCCCCCHHH
Confidence 344444899999999999988877554
No 71
>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=28.88 E-value=47 Score=31.18 Aligned_cols=66 Identities=11% Similarity=0.010 Sum_probs=52.6
Q ss_pred hHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhcCCchH
Q 005732 550 LHEAEEFIKDMPIELDAVVWGALLSACWFWMNMEVGERAAQKMFGLDKKPISAYVILSNIYAVLGKWGK 618 (680)
Q Consensus 550 ~~~A~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~ 618 (680)
-+.|.++.+-|+ ........+......|++..|.++.+.++..+|++..+...++.+|.+.|.-.+
T Consensus 417 ~~~a~~~v~~~G---G~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~ 482 (505)
T d2cfua2 417 EDSAGRYVEYMG---GAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAE 482 (505)
T ss_dssp HHHHHHHHHHTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHcC---CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhCc
Confidence 356777888775 244455556666788999999999999999999999999999999988775544
No 72
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=28.88 E-value=65 Score=23.46 Aligned_cols=59 Identities=12% Similarity=0.081 Sum_probs=37.6
Q ss_pred HHHHCCCCCCHHHHHHHHHHHhcc-CCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcC
Q 005732 489 IMLEQDIVPNAATFVGVLSACVRA-GLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRSG 548 (680)
Q Consensus 489 ~m~~~~~~p~~~~~~~ll~~~~~~-g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 548 (680)
++.+.|++++.. -..++..+... +..-.|.++++.+.+.+...+..|.-.-++.+...|
T Consensus 6 ~Lr~~GlR~T~q-R~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~i~~aTVYR~L~~l~e~g 65 (134)
T d1mzba_ 6 ELRKAGLKVTLP-RVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAG 65 (134)
T ss_dssp HHHHTTCCCCHH-HHHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCCCHH-HHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCccHHHHHHHHHHHHhcc
Confidence 366778887653 33455666554 446778888888887777777665544455555544
No 73
>d1bpoa1 a.118.1.4 (A:331-487) Clathrin heavy-chain linker domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=28.52 E-value=1.1e+02 Score=22.88 Aligned_cols=113 Identities=12% Similarity=0.018 Sum_probs=0.0
Q ss_pred HhhcCCCHHHHHHHHhhcC-CCccchhhHHHHHHHhcCCHHHHHHHHHHhcc---CChhHHHHHHHHHhccCChhhHHHH
Q 005732 262 FYCGCEAFDGAMRVYDRLE-NPCLNASNSLINGLISMGRIEDAELIFNRLTE---ANSISYNSMIKGYAVYGQVDDSKRL 337 (680)
Q Consensus 262 ~~~~~g~~~~A~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~---~~~~~~~~ll~~~~~~~~~~~a~~~ 337 (680)
.....++.+-|.++-.+.. +.....|..-...+...|++.+|-.+--.... .+..|.+.+-..=...|+..--...
T Consensus 8 i~~~l~n~~la~~lA~r~~LpGAd~l~~~~F~~lf~~g~y~eAA~~aA~sP~giLRt~~Ti~rFk~~~~~pGq~spLL~Y 87 (157)
T d1bpoa1 8 ITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQY 87 (157)
T ss_dssp HHHTTCCHHHHHHHHHHTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSGGGSSCSHHHHHHHTTSCCCTTSCCHHHHH
T ss_pred HHhccCCHHHHHHHHHhcCCCChHHHHHHHHHHHHHcCCHHHHHHHHHhCCcccccCHHHHHHHHcCCCCCCCCCHHHHH
Q ss_pred HhhcCcCCcchhhhHhhhcccCCCChhHHHHHHHHHHhCCChHHHHHHHHH
Q 005732 338 FEKMPHRSIISLNTMISVIPEMERNPVTWNSMISGYVQNNLHEKALQLYMT 388 (680)
Q Consensus 338 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~li~~~~~~~~~~~A~~~~~~ 388 (680)
|..+.+.+ +.|..--.-++..-...|+.+-...++.+
T Consensus 88 F~~Ll~~~--------------~LN~~ESlEl~r~vL~q~r~~lve~Wl~e 124 (157)
T d1bpoa1 88 FGILLDQG--------------QLNKYESLELCRPVLQQGRKQLLEKWLKE 124 (157)
T ss_dssp HHHHHHHS--------------CCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhcC--------------CCchHHhHHHHHHHHhcCcHHHHHHHHHc
No 74
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=28.23 E-value=62 Score=23.55 Aligned_cols=58 Identities=9% Similarity=0.084 Sum_probs=32.3
Q ss_pred HHhCCCCCCHhhHHHHHHHHhcc-CChHHHHHHHHHHHHhCCCCcchhhhhHHHHHHcCC
Q 005732 75 MHRSNVKLNETTFSTILSVCAQL-NSLIDGKQIHCLVLKSGYECFEFVGSGLLFFYANCF 133 (680)
Q Consensus 75 m~~~~~~~~~~t~~~ll~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 133 (680)
+++.|++++.. =..++..+... +.+-.|.++++.+.+.+...+..|.-.-+..+...|
T Consensus 7 Lr~~GlR~T~q-R~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~i~~aTVYR~L~~l~e~g 65 (134)
T d1mzba_ 7 LRKAGLKVTLP-RVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAG 65 (134)
T ss_dssp HHHTTCCCCHH-HHHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHcCCCCCHH-HHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCccHHHHHHHHHHHHhcc
Confidence 56667666653 33444555444 346667777777777666655554444444444433
No 75
>d1u9pa1 a.43.1.1 (A:72-107) Arc repressor {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=28.15 E-value=37 Score=17.21 Aligned_cols=23 Identities=22% Similarity=0.329 Sum_probs=12.8
Q ss_pred hcCCCCChhHHHHHHHHHHhcCC
Q 005732 527 SYGVVPTLEHYTCVVDLLGRSGH 549 (680)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~g~ 549 (680)
+.|...+..+|...+..+.+.|+
T Consensus 13 eng~s~ns~iy~~vmes~kkegr 35 (36)
T d1u9pa1 13 ENGRSVNSEIYQRVMESFKKEGR 35 (36)
T ss_dssp HHTCCHHHHHHHHHHHHHHHTTC
T ss_pred HcCcchhHHHHHHHHHHHHHccC
Confidence 44555555566655555555554
No 76
>d1jvra_ a.61.1.2 (A:) HTLV-II matrix protein {Human T-cell leukemia virus type 2 [TaxId: 11909]}
Probab=28.15 E-value=76 Score=22.47 Aligned_cols=66 Identities=12% Similarity=0.174 Sum_probs=47.5
Q ss_pred ChhhHHHHHHHHHcCC------ChhHHHHHHHHHHhCCCCCCHhhHHHHHHHHhccCChHHHHHHHHHHHHhC
Q 005732 48 TVVSWNTMLCGYSKWA------KFDESLSLVSTMHRSNVKLNETTFSTILSVCAQLNSLIDGKQIHCLVLKSG 114 (680)
Q Consensus 48 ~~~~~~~ll~~~~~~~------~~~~a~~~~~~m~~~~~~~~~~t~~~ll~~~~~~~~~~~a~~~~~~~~~~~ 114 (680)
....|-.++.+--|.. +|.+-.+.++-..+.-+..+..+| +++.+++-.|....+-+++..+++.-
T Consensus 21 s~hhWLNfLQaAyRLqPgPS~~DF~qLr~flklalkTpvwl~Pi~y-Slla~liPkgypGRv~ei~~iLi~~q 92 (137)
T d1jvra_ 21 STHHWLNFLQAAYRLQPGPSDFDFQQLRRFLKLALKTPIWLNPIDY-SLLASLIPKGYPGRVVEIINILVKNQ 92 (137)
T ss_dssp THHHHHHHHHHHHHSSCCCSTTTHHHHHHHHHHHHTCTTSTTTTCT-TTHHHHSCSSCSTTHHHHHHHHHTTT
T ss_pred cHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhCccccccccc-chhhccCCCCCCccHHHHHHHHHHcc
Confidence 4567877777665533 677888888888888888888888 66667777777777777777766643
No 77
>d1h6pa_ a.146.1.1 (A:) TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.26 E-value=65 Score=25.24 Aligned_cols=20 Identities=15% Similarity=0.217 Sum_probs=13.9
Q ss_pred HHHHHhcCChHHHHHHHHhC
Q 005732 541 VDLLGRSGHLHEAEEFIKDM 560 (680)
Q Consensus 541 ~~~~~~~g~~~~A~~~~~~~ 560 (680)
+-.|.+.|.+++|.+++++.
T Consensus 120 V~VCmekg~Fk~A~eil~r~ 139 (203)
T d1h6pa_ 120 VIICIKNKEFEKASKILKKH 139 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHhcchHHHHHHHHHH
Confidence 34567777777777777665
No 78
>d3bgea1 a.80.1.2 (A:251-434) Uncharacterized protein NTHI1458 {Haemophilus influenzae [TaxId: 727]}
Probab=25.90 E-value=1.1e+02 Score=23.79 Aligned_cols=44 Identities=20% Similarity=0.172 Sum_probs=29.9
Q ss_pred HHHHHH---hCCChHHHHHHHHHHHHCCCCCChhhHHHHHHHhcccC
Q 005732 369 MISGYV---QNNLHEKALQLYMTMRKLAIDRTRSTFSVLFHACSCLG 412 (680)
Q Consensus 369 li~~~~---~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~ 412 (680)
+|+++. +..+.+.|+-++.+|.+.|-.|....-..++-++..-|
T Consensus 7 ~iSA~~KSiRgSD~dAaly~larml~~GeDp~~i~RRl~~~AsEDIG 53 (184)
T d3bgea1 7 LISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVG 53 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHhcCCccHHHHHHHHHHHcCCChHHHHHHHHHHHHhhcC
Confidence 444443 46789999999999999887776665555555544433
No 79
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId: 9913]}
Probab=24.67 E-value=1.7e+02 Score=23.66 Aligned_cols=160 Identities=9% Similarity=0.005 Sum_probs=85.6
Q ss_pred HHHHHHHcCChhHHHHHHHHHHHCCCCCCHHHHHHHHHHHh-ccCCHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhc-
Q 005732 470 LMNGYSHHGLGSEAVLLFEIMLEQDIVPNAATFVGVLSACV-RAGLVNEGMKIFRSMKSYGVVPTLEHYTCVVDLLGRS- 547 (680)
Q Consensus 470 l~~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~ll~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 547 (680)
+....-+.++++++...++++.+.+...+..-.+.|-.+|- ..|....+++++..+...... +. ....++.-|.+.
T Consensus 9 ~Aklaeq~eRy~dm~~~mk~~~~~~~eLt~eERnLlsvayKn~i~~rR~s~R~l~~ie~k~~~-~~-~~~~~i~~yk~ki 86 (230)
T d2o02a1 9 KAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTEG-AE-KKQQMAREYREKI 86 (230)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CHHHHHHHHHHH
T ss_pred HHHHHHHHcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHcC-cc-hhhHHHHHHHHHH
Confidence 44556778888888888888888776666666555555552 245556667777666532211 11 111222222211
Q ss_pred -----CChHHHHHHHHhC--C--CCCCHHHHHHHHHH-HH-----------hcCCHHHHHHHHHHHHc-----CCCCCCc
Q 005732 548 -----GHLHEAEEFIKDM--P--IELDAVVWGALLSA-CW-----------FWMNMEVGERAAQKMFG-----LDKKPIS 601 (680)
Q Consensus 548 -----g~~~~A~~~~~~~--~--~~p~~~~~~~l~~~-~~-----------~~g~~~~a~~~~~~~~~-----~~p~~~~ 601 (680)
.-..+.+++++.. + ..+...+|..-+.+ |. +..-.+.|...|+++.+ +.|.+|.
T Consensus 87 e~EL~~~C~dil~lid~~Lip~~~~~eskvFy~KmkgDy~RY~aE~~~~~e~~~~~~~a~~aY~~A~~~A~~~L~~t~pi 166 (230)
T d2o02a1 87 ETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPI 166 (230)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHcchHHHHHhhcCccCCCchhhhhHHHhcccHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH
Confidence 1123445555443 1 22223333222221 21 11234567777777754 5566643
Q ss_pred h----HHHHHHHHHhcCCchHHHHHHHHHhhCCC
Q 005732 602 A----YVILSNIYAVLGKWGKKMDIRKRLTHLEV 631 (680)
Q Consensus 602 ~----~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 631 (680)
- ++.-+..|...|+.++|.++.++..+..+
T Consensus 167 rLgL~LN~SVF~YEi~~~~~~A~~lak~afd~ai 200 (230)
T d2o02a1 167 RLGLALNFSVFYYEILNSPEKACSLAKTAFDEAI 200 (230)
T ss_dssp HHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 2 22334456678999999999988876543
No 80
>d2f6ma1 a.2.17.1 (A:322-385) Vacuolar protein sorting-associated protein 23, VPS23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.90 E-value=31 Score=21.41 Aligned_cols=46 Identities=20% Similarity=0.083 Sum_probs=33.3
Q ss_pred eHHHHHHHHHhCCCChHHHHHHHHHHHHcCCCCCCcchHHHHHHHHhcc
Q 005732 183 VWTKLISGYAKSVDGCEKALKLFRWMRESGENMPNEYTFDSVIRACARL 231 (680)
Q Consensus 183 ~~~~ll~~~~~~~~~~~~a~~~~~~m~~~~~~~p~~~~~~~ll~~~~~~ 231 (680)
.+|.++..++...- .+.++..+.++.+.|.. +..+|..-.+.+++.
T Consensus 3 a~nQl~~l~Aed~A-ieDaiy~L~~aL~~G~I--~~d~ylK~vR~LaRe 48 (64)
T d2f6ma1 3 GLNQLYNLVAQDYA-LTDTIEALSRMLHRGTI--PLDTFVKQGRELARQ 48 (64)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHHTSS--CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCc--CHHHHHHHHHHHHHH
Confidence 35677777776655 78888888888888866 677777777666653
No 81
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.55 E-value=1.2e+02 Score=21.74 Aligned_cols=65 Identities=14% Similarity=0.234 Sum_probs=40.1
Q ss_pred HHHHHHHHHhcCChHHHHHHHhcCCCCCH---HHHHHHHHHHHHcCCh--hHHHHHHHHHHHCCCCCCHH
Q 005732 436 GTSLVDMYSRCGSINDAQASFSSISSPNV---AAWTALMNGYSHHGLG--SEAVLLFEIMLEQDIVPNAA 500 (680)
Q Consensus 436 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~---~~~~~l~~~~~~~~~~--~~A~~~~~~m~~~~~~p~~~ 500 (680)
...++.-|...|+.++|...++++..|.. ..+..+..+.-+.+.. +.+..++..+...|+-+...
T Consensus 10 ~~~ll~EY~~~~D~~Ea~~~l~eL~~p~~~~e~V~~~i~~ale~~~~~r~~~~~~Ll~~L~~~~~is~~~ 79 (129)
T d2nsza1 10 IDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQ 79 (129)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHcCCchhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHCCCCCHHH
Confidence 35667778888888888888888776532 2333333344344433 23567888888877654433
No 82
>d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.77 E-value=1.1e+02 Score=19.96 Aligned_cols=20 Identities=25% Similarity=0.202 Sum_probs=11.8
Q ss_pred HHHHHHhcCChHHHHHHHHh
Q 005732 540 VVDLLGRSGHLHEAEEFIKD 559 (680)
Q Consensus 540 l~~~~~~~g~~~~A~~~~~~ 559 (680)
=.+.+.+.|++++|++..++
T Consensus 14 rAer~l~~~rydeAIech~k 33 (83)
T d2crba1 14 RADRLLAAGKYEEAISCHRK 33 (83)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH
Confidence 34556666666666665543
Done!