BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005734
(680 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 140/291 (48%), Gaps = 28/291 (9%)
Query: 379 ELDTACEDFSN--IIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVD 436
EL A ++FSN I+ +YKG L+ G +AV ++ + E+ ++ +V+
Sbjct: 32 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL----KEERXQGGELQFQTEVE 87
Query: 437 TLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH--LDWNARMRII 494
+S H+N + L G+C P R++V+ Y NG+V L + LDW R RI
Sbjct: 88 MISMAVHRNLLRLRGFCM--TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 495 MGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENS 554
+G+A L Y+H +P + H ++ + I L +++ A V + + K
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 205
Query: 555 VLPPLADPE----------TNIYSFGILMLEIISGKLPY-----CEEKELSIEKWAADYL 599
+ +A PE T+++ +G+++LE+I+G+ + + ++ + W L
Sbjct: 206 TIGHIA-PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 264
Query: 600 NEPRNFSCMIDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
E + ++D L+ ++K E+E + +V C ++ +RP M++++ L
Sbjct: 265 KE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 139/291 (47%), Gaps = 28/291 (9%)
Query: 379 ELDTACEDF--SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVD 436
EL A ++F NI+ +YKG L+ G +AV ++ + E+ ++ +V+
Sbjct: 24 ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRL----KEERTQGGELQFQTEVE 79
Query: 437 TLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH--LDWNARMRII 494
+S H+N + L G+C P R++V+ Y NG+V L + LDW R RI
Sbjct: 80 MISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 495 MGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENS 554
+G+A L Y+H +P + H ++ + I L +++ A V + + K
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 197
Query: 555 VLPPLADPE----------TNIYSFGILMLEIISGKLPY-----CEEKELSIEKWAADYL 599
+ +A PE T+++ +G+++LE+I+G+ + + ++ + W L
Sbjct: 198 XIGHIA-PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 600 NEPRNFSCMIDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
E + ++D L+ ++K E+E + +V C ++ +RP M++++ L
Sbjct: 257 KE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 138/298 (46%), Gaps = 33/298 (11%)
Query: 378 LELDTACEDFSNIIDTQSGC--TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQV 435
++L+ A +F + G +YKG L G ++A+ SS+ + +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEI----- 86
Query: 436 DTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMD--HLDWNARMRI 493
+TLS H + V+LIG+C DE +++++Y NG + HL+ ++ + W R+ I
Sbjct: 87 ETLSFCRHPHLVSLIGFC--DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 494 IMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT--IALPKSKVSDDI 551
+G A L Y+H + H ++ S I L +++ K+ + + L ++ + +
Sbjct: 145 CIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 552 ENSVLPPLADPE----------TNIYSFGILMLEIISGKLPYCE---EKELSIEKWAADY 598
+ ++ DPE +++YSFG+++ E++ + + + +++ +WA +
Sbjct: 202 KGTL--GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 599 LNEPRNFSCMIDPSL-KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655
N + ++DP+L + L + +C+ RP+M D++ +L + +
Sbjct: 260 HNNGQ-LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 138/298 (46%), Gaps = 33/298 (11%)
Query: 378 LELDTACEDFSNIIDTQSGC--TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQV 435
++L+ A +F + G +YKG L G ++A+ SS+ + +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEI----- 86
Query: 436 DTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMD--HLDWNARMRI 493
+TLS H + V+LIG+C DE +++++Y NG + HL+ ++ + W R+ I
Sbjct: 87 ETLSFCRHPHLVSLIGFC--DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 494 IMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT--IALPKSKVSDDI 551
+G A L Y+H + H ++ S I L +++ K+ + + L ++ + +
Sbjct: 145 CIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 552 ENSVLPPLADPE----------TNIYSFGILMLEIISGKLPYCE---EKELSIEKWAADY 598
+ ++ DPE +++YSFG+++ E++ + + + +++ +WA +
Sbjct: 202 KGTL--GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 599 LNEPRNFSCMIDPSL-KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655
N + ++DP+L + L + +C+ RP+M D++ +L + +
Sbjct: 260 HNNGQ-LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 129/274 (47%), Gaps = 34/274 (12%)
Query: 398 TIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+YKG ++ + V + A + + + LK Q + +++ +++ H+N V L+G+ D
Sbjct: 46 VVYKGYVNNTTVAVKKLAAMVDITTEELKQQ---FDQEIKVMAKCQHENLVELLGFSSDG 102
Query: 457 EPFNRMMVFEYAPNGTVFEHLH-IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
+ +V+ Y PNG++ + L + L W+ R +I G A + ++H + H
Sbjct: 103 DDL--CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHR 157
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENS-------VLPPLA-----DPE 563
++ S I L + + AK+++ +A K + + S + P A P+
Sbjct: 158 DIKSANILLDEAFTAKISDF---GLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITPK 214
Query: 564 TNIYSFGILMLEIISGKLPYCEEKE-----LSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618
++IYSFG+++LEII+G LP +E L I++ D ++ ID +
Sbjct: 215 SDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDY---IDKKMNDADS 270
Query: 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+EA+ V +C+ +RP + + L+++
Sbjct: 271 TSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 129/274 (47%), Gaps = 34/274 (12%)
Query: 398 TIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+YKG ++ + V + A + + + LK Q + +++ +++ H+N V L+G+ D
Sbjct: 40 VVYKGYVNNTTVAVKKLAAMVDITTEELKQQ---FDQEIKVMAKCQHENLVELLGFSSDG 96
Query: 457 EPFNRMMVFEYAPNGTVFEHLH-IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
+ +V+ Y PNG++ + L + L W+ R +I G A + ++H + H
Sbjct: 97 DDL--CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHR 151
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI-------ENSVLPPLA-----DPE 563
++ S I L + + AK+++ +A K + + + + P A P+
Sbjct: 152 DIKSANILLDEAFTAKISDF---GLARASEKFAQXVMXXRIVGTTAYMAPEALRGEITPK 208
Query: 564 TNIYSFGILMLEIISGKLPYCEEKE-----LSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618
++IYSFG+++LEII+G LP +E L I++ D ++ ID +
Sbjct: 209 SDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDY---IDKKMNDADS 264
Query: 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+EA+ V +C+ +RP + + L+++
Sbjct: 265 TSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 129/274 (47%), Gaps = 34/274 (12%)
Query: 398 TIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+YKG ++ + V + A + + + LK Q + +++ +++ H+N V L+G+ D
Sbjct: 46 VVYKGYVNNTTVAVKKLAAMVDITTEELKQQ---FDQEIKVMAKCQHENLVELLGFSSDG 102
Query: 457 EPFNRMMVFEYAPNGTVFEHLH-IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
+ +V+ Y PNG++ + L + L W+ R +I G A + ++H + H
Sbjct: 103 DDL--CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHR 157
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI-------ENSVLPPLA-----DPE 563
++ S I L + + AK+++ +A K + + + + P A P+
Sbjct: 158 DIKSANILLDEAFTAKISDF---GLARASEKFAQTVMXXRIVGTTAYMAPEALRGEITPK 214
Query: 564 TNIYSFGILMLEIISGKLPYCEEKE-----LSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618
++IYSFG+++LEII+G LP +E L I++ D ++ ID +
Sbjct: 215 SDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDY---IDKKMNDADS 270
Query: 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+EA+ V +C+ +RP + + L+++
Sbjct: 271 TSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 122/286 (42%), Gaps = 43/286 (15%)
Query: 379 ELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTL 438
E++ + S I + S T+YKG V A I D Q A+R +V L
Sbjct: 32 EIEASEVMLSTRIGSGSFGTVYKGKWHGDV-----AVKILKVVDPTPEQFQAFRNEVAVL 86
Query: 439 SRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTA 498
+ H N + +GY D N +V ++ ++++HLH++E + + I TA
Sbjct: 87 RKTRHVNILLFMGYMTKD---NLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTA 142
Query: 499 YCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA--LPKSKVSDDIENSVL 556
+ Y+H + + H ++ S+ I+L + K+ + T+ S+ + SVL
Sbjct: 143 QGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL 199
Query: 557 ---PPLADPETN--------IYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605
P + + N +YS+GI++ E+++G+LPY ++N
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS-------------HINNRDQI 246
Query: 606 SCMI-----DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
M+ P L +N +A+ ++ +C+K +RP I+
Sbjct: 247 IFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQIL 292
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 43/277 (15%)
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I + S T+YKG ++AV +T+ Q A++ +V L + H N + +
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + +V ++ +++ HLHI E + + I TA + Y+H +
Sbjct: 99 GYSTKPQL---AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAK--- 151
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVL---PPL--- 559
+ H +L S+ I+L +D K+ + T+ KS+ S + + S+L P +
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV---KSRWSGSHQFEQLSGSILWMAPEVIRM 208
Query: 560 --ADP---ETNIYSFGILMLEIISGKLPY--CEEKELSIEKWAADYLNEPRNFSCMIDPS 612
+P ++++Y+FGI++ E+++G+LPY ++ I YL+ P
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS----------PD 258
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
L + N +A+ ++ EC+K +RP I+ +
Sbjct: 259 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 43/277 (15%)
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I + S T+YKG ++AV +T+ Q A++ +V L + H N + +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + +V ++ +++ HLHI E + + I TA + Y+H +
Sbjct: 76 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAK--- 128
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVL---PPL--- 559
+ H +L S+ I+L +D K+ + T+ KS+ S + + S+L P +
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV---KSRWSGSHQFEQLSGSILWMAPEVIRM 185
Query: 560 --ADP---ETNIYSFGILMLEIISGKLPY--CEEKELSIEKWAADYLNEPRNFSCMIDPS 612
+P ++++Y+FGI++ E+++G+LPY ++ I YL+ P
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS----------PD 235
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
L + N +A+ ++ EC+K +RP I+ +
Sbjct: 236 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 272
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 43/277 (15%)
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I + S T+YKG ++AV +T+ Q A++ +V L + H N + +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + +V ++ +++ HLHI E + + I TA + Y+H +
Sbjct: 76 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAK--- 128
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVL---PPL--- 559
+ H +L S+ I+L +D K+ + T+ KS+ S + + S+L P +
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV---KSRWSGSHQFEQLSGSILWMAPEVIRM 185
Query: 560 --ADP---ETNIYSFGILMLEIISGKLPY--CEEKELSIEKWAADYLNEPRNFSCMIDPS 612
+P ++++Y+FGI++ E+++G+LPY ++ I YL+ P
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS----------PD 235
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
L + N +A+ ++ EC+K +RP I+ +
Sbjct: 236 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 272
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 43/277 (15%)
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I + S T+YKG ++AV +T+ Q A++ +V L + H N + +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + +V ++ +++ HLHI E + + I TA + Y+H +
Sbjct: 71 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAK--- 123
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVL---PPL--- 559
+ H +L S+ I+L +D K+ + T+ KS+ S + + S+L P +
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV---KSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 560 --ADP---ETNIYSFGILMLEIISGKLPY--CEEKELSIEKWAADYLNEPRNFSCMIDPS 612
+P ++++Y+FGI++ E+++G+LPY ++ I YL+ P
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS----------PD 230
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
L + N +A+ ++ EC+K +RP I+ +
Sbjct: 231 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 43/277 (15%)
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I + S T+YKG ++AV +T+ Q A++ +V L + H N + +
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + +V ++ +++ HLHI E + + I TA + Y+H +
Sbjct: 73 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAK--- 125
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVL---PPL--- 559
+ H +L S+ I+L +D K+ + T+ KS+ S + + S+L P +
Sbjct: 126 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV---KSRWSGSHQFEQLSGSILWMAPEVIRM 182
Query: 560 --ADP---ETNIYSFGILMLEIISGKLPY--CEEKELSIEKWAADYLNEPRNFSCMIDPS 612
+P ++++Y+FGI++ E+++G+LPY ++ I YL+ P
Sbjct: 183 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS----------PD 232
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
L + N +A+ ++ EC+K +RP I+ +
Sbjct: 233 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 269
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 43/277 (15%)
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I + S T+YKG ++AV +T+ Q A++ +V L + H N + +
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + +V ++ +++ HLHI E + + I TA + Y+H +
Sbjct: 98 GYSTKPQL---AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAK--- 150
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVL---PPL--- 559
+ H +L S+ I+L +D K+ + T+ KS+ S + + S+L P +
Sbjct: 151 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV---KSRWSGSHQFEQLSGSILWMAPEVIRM 207
Query: 560 --ADP---ETNIYSFGILMLEIISGKLPY--CEEKELSIEKWAADYLNEPRNFSCMIDPS 612
+P ++++Y+FGI++ E+++G+LPY ++ I YL+ P
Sbjct: 208 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS----------PD 257
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
L + N +A+ ++ EC+K +RP I+ +
Sbjct: 258 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 294
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 129/280 (46%), Gaps = 43/280 (15%)
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I + S T+YKG ++AV +T+ Q A++ +V L + H N + +
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + +V ++ +++ HLH E + + I TA + Y+H +
Sbjct: 75 GYSTKPQ---LAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAK--- 127
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVL---PPL--- 559
+ H +L S+ I+L +D K+ + T+ KS+ S + + S+L P +
Sbjct: 128 SIIHRDLKSNNIFLHEDNTVKIGDFGLATV---KSRWSGSHQFEQLSGSILWMAPEVIRM 184
Query: 560 --ADP---ETNIYSFGILMLEIISGKLPYC--EEKELSIEKWAADYLNEPRNFSCMIDPS 612
++P ++++Y+FGI++ E+++G+LPY ++ IE L+ P
Sbjct: 185 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS----------PD 234
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
L + N + + ++ EC+K +RP+ I+ ++ ++
Sbjct: 235 LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 398 TIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+YKG ++ + V + A + + + LK Q + +++ ++ H+N V L+G+ D
Sbjct: 37 VVYKGYVNNTTVAVKKLAAMVDITTEELKQQ---FDQEIKVXAKCQHENLVELLGFSSDG 93
Query: 457 EPFNRMMVFEYAPNGTVFEHLH-IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
+ +V+ Y PNG++ + L + L W+ R +I G A + ++H + H
Sbjct: 94 DDL--CLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHR 148
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVL-------PPLA-----DPE 563
++ S I L + + AK+++ +A K + + S + P A P+
Sbjct: 149 DIKSANILLDEAFTAKISDF---GLARASEKFAQXVXXSRIVGTTAYXAPEALRGEITPK 205
Query: 564 TNIYSFGILMLEIISGKLPYCEEKE-----LSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618
++IYSFG+++LEII+G LP +E L I++ D ++ ID
Sbjct: 206 SDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDY---IDKKXNDADS 261
Query: 619 NELEAICEVIKECIKTDLRQRPTMNDI 645
+EA V +C+ +RP + +
Sbjct: 262 TSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 43/277 (15%)
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I + S T+YKG ++AV +T+ Q A++ +V L + H N + +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + +V ++ +++ HLHI E + + I TA + Y+H +
Sbjct: 71 GYSTAPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAK--- 123
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVL---PPL--- 559
+ H +L S+ I+L +D K+ + T+ KS+ S + + S+L P +
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATV---KSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 560 --ADP---ETNIYSFGILMLEIISGKLPY--CEEKELSIEKWAADYLNEPRNFSCMIDPS 612
+P ++++Y+FGI++ E+++G+LPY ++ I YL+ P
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS----------PD 230
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
L + N +A+ ++ EC+K +RP I+ +
Sbjct: 231 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 43/277 (15%)
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I + S T+YKG ++AV +T+ Q A++ +V L + H N + +
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + +V ++ +++ HLHI E + + I TA + Y+H +
Sbjct: 91 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAK--- 143
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVL---PPL--- 559
+ H +L S+ I+L +D K+ + T KS+ S + + S+L P +
Sbjct: 144 SIIHRDLKSNNIFLHEDLTVKIGDFGLAT---EKSRWSGSHQFEQLSGSILWMAPEVIRM 200
Query: 560 --ADP---ETNIYSFGILMLEIISGKLPY--CEEKELSIEKWAADYLNEPRNFSCMIDPS 612
+P ++++Y+FGI++ E+++G+LPY ++ I YL+ P
Sbjct: 201 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS----------PD 250
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
L + N +A+ ++ EC+K +RP I+ +
Sbjct: 251 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 287
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 43/277 (15%)
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I + S T+YKG ++AV +T+ Q A++ +V L + H N + +
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + +V ++ +++ HLHI E + + I TA + Y+H +
Sbjct: 99 GYSTKPQL---AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAK--- 151
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVL---PPL--- 559
+ H +L S+ I+L +D K+ + T KS+ S + + S+L P +
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLAT---EKSRWSGSHQFEQLSGSILWMAPEVIRM 208
Query: 560 --ADP---ETNIYSFGILMLEIISGKLPY--CEEKELSIEKWAADYLNEPRNFSCMIDPS 612
+P ++++Y+FGI++ E+++G+LPY ++ I YL+ P
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS----------PD 258
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
L + N +A+ ++ EC+K +RP I+ +
Sbjct: 259 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 43/277 (15%)
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I + S T+YKG ++AV +T+ Q A++ +V L + H N + +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + +V ++ +++ HLHI E + + I TA + Y+H +
Sbjct: 71 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAK--- 123
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVL---PPL--- 559
+ H +L S+ I+L +D K+ + T KS+ S + + S+L P +
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLAT---EKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 560 --ADP---ETNIYSFGILMLEIISGKLPY--CEEKELSIEKWAADYLNEPRNFSCMIDPS 612
+P ++++Y+FGI++ E+++G+LPY ++ I YL+ P
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS----------PD 230
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
L + N +A+ ++ EC+K +RP I+ +
Sbjct: 231 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 128/280 (45%), Gaps = 43/280 (15%)
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I + S T+YKG ++AV +T+ Q A++ +V L + H N + +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAP---TPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + +V ++ +++ HLH E + + I TA + Y+H +
Sbjct: 87 GYSTKPQL---AIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAK--- 139
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVL---PPL--- 559
+ H +L S+ I+L +D K+ + T KS+ S + + S+L P +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLAT---EKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 560 --ADP---ETNIYSFGILMLEIISGKLPYC--EEKELSIEKWAADYLNEPRNFSCMIDPS 612
++P ++++Y+FGI++ E+++G+LPY ++ IE L+ P
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS----------PD 246
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
L + N + + ++ EC+K +RP+ I+ ++ ++
Sbjct: 247 LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 128/280 (45%), Gaps = 43/280 (15%)
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I + S T+YKG ++AV +T+ Q A++ +V L + H N + +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + +V ++ +++ HLH E + + I TA + Y+H +
Sbjct: 87 GYSTAPQ---LAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAK--- 139
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVL---PPL--- 559
+ H +L S+ I+L +D K+ + T KS+ S + + S+L P +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLAT---EKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 560 --ADP---ETNIYSFGILMLEIISGKLPYC--EEKELSIEKWAADYLNEPRNFSCMIDPS 612
++P ++++Y+FGI++ E+++G+LPY ++ IE L+ P
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS----------PD 246
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
L + N + + ++ EC+K +RP+ I+ ++ ++
Sbjct: 247 LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 113/261 (43%), Gaps = 34/261 (13%)
Query: 414 ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTV 473
A I +D+ + + ++V + R+ H N V +G +P N +V EY G++
Sbjct: 64 AVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT--QPPNLSIVTEYLSRGSL 121
Query: 474 FEHLHIK-EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKV 532
+ LH + LD R+ + A + Y+H+ NPP+ H NL S + + Y KV
Sbjct: 122 YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKV 180
Query: 533 AEICFTTI---ALPKSKVSDDIENSVLPPL-----ADPETNIYSFGILMLEIISGKLPYC 584
+ + + SK + + P + ++ ++++YSFG+++ E+ + + P+
Sbjct: 181 CDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240
Query: 585 E---EKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPT 641
+ ++ + L PRN + + +I+ C + +RP+
Sbjct: 241 NLNPAQVVAAVGFKCKRLEIPRNLN---------------PQVAAIIEGCWTNEPWKRPS 285
Query: 642 MNDIIVQLRQVINISPEQAVP 662
I+ LR +I + AVP
Sbjct: 286 FATIMDLLRPLI----KSAVP 302
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 113/261 (43%), Gaps = 34/261 (13%)
Query: 414 ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTV 473
A I +D+ + + ++V + R+ H N V +G +P N +V EY G++
Sbjct: 64 AVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT--QPPNLSIVTEYLSRGSL 121
Query: 474 FEHLHIK-EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKV 532
+ LH + LD R+ + A + Y+H+ NPP+ H +L S + + Y KV
Sbjct: 122 YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKV 180
Query: 533 AEICFTTI---ALPKSKVSDDIENSVLPPL-----ADPETNIYSFGILMLEIISGKLPYC 584
+ + + SK + + P + ++ ++++YSFG+++ E+ + + P+
Sbjct: 181 CDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240
Query: 585 E---EKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPT 641
+ ++ + L PRN + + +I+ C + +RP+
Sbjct: 241 NLNPAQVVAAVGFKCKRLEIPRNLN---------------PQVAAIIEGCWTNEPWKRPS 285
Query: 642 MNDIIVQLRQVINISPEQAVP 662
I+ LR +I + AVP
Sbjct: 286 FATIMDLLRPLI----KSAVP 302
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 40/292 (13%)
Query: 379 ELDTACEDFSNIIDTQSGCTIYKGTL--SSGV-EIAVAATAITSSKDWLKSQEMAYRKQV 435
E+ +C +I +YKG L SSG E+ VA + + + + Q + + +
Sbjct: 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG--YTEKQRVDFLGEA 97
Query: 436 DTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIK--EMDHLDWNARMRI 493
+ + +H N + L G +P M++ EY NG + + L K E L +R
Sbjct: 98 GIMGQFSHHNIIRLEGVISKYKPM--MIITEYMENGALDKFLREKDGEFSVLQLVGMLR- 154
Query: 494 IMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIEN 553
G A ++Y+ N H +L++ I + + KV++ + + + +
Sbjct: 155 --GIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSG 209
Query: 554 SVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNE 601
+P PE ++++SFGI+M E+++ G+ PY E + K D
Sbjct: 210 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL 269
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
P C PS AI +++ +C + + +RP DI+ L ++I
Sbjct: 270 PTPMDC---PS----------AIYQLMMQCWQQERARRPKFADIVSILDKLI 308
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 112/236 (47%), Gaps = 32/236 (13%)
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
++++V +S +NH N V L G + MV E+ P G ++ L + + + W+ +
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPP----RMVMEFVPCGDLYHRL-LDKAHPIKWSVK 124
Query: 491 MRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT--DDYA---AKVAEICFTTIALPKS 545
+R+++ A ++YM ++ NPP+ H +L S I+L D+ A AKVA+ F T
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD--FGTSQQSVH 181
Query: 546 KVSDDIENS--VLPPLADPE-------TNIYSFGILMLEIISGKLPYCEEKELSIEKWAA 596
VS + N + P E + YSF +++ I++G+ P+ E I+
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK---- 237
Query: 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
++N R + P++ L + E+ C D ++RP + I+ +L ++
Sbjct: 238 -FINMIREEG--LRPTIPEDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 113/236 (47%), Gaps = 32/236 (13%)
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
++++V +S +NH N V L G + MV E+ P G ++ L + + + W+ +
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPP----RMVMEFVPCGDLYHRL-LDKAHPIKWSVK 124
Query: 491 MRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT--DDYA---AKVAEICFTTIALPKS 545
+R+++ A ++YM ++ NPP+ H +L S I+L D+ A AKVA+ + ++
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV--H 181
Query: 546 KVSDDIENS--VLPPLADPE-------TNIYSFGILMLEIISGKLPYCEEKELSIEKWAA 596
VS + N + P E + YSF +++ I++G+ P+ E I+
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK---- 237
Query: 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
++N R + P++ L + E+ C D ++RP + I+ +L ++
Sbjct: 238 -FINMIREEG--LRPTIPEDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 113/236 (47%), Gaps = 32/236 (13%)
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
++++V +S +NH N V L G + MV E+ P G ++ L + + + W+ +
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPP----RMVMEFVPCGDLYHRL-LDKAHPIKWSVK 124
Query: 491 MRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT--DDYA---AKVAEICFTTIALPKS 545
+R+++ A ++YM ++ NPP+ H +L S I+L D+ A AKVA+ + ++
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV--H 181
Query: 546 KVSDDIENS--VLPPLADPE-------TNIYSFGILMLEIISGKLPYCEEKELSIEKWAA 596
VS + N + P E + YSF +++ I++G+ P+ E I+
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK---- 237
Query: 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
++N R + P++ L + E+ C D ++RP + I+ +L ++
Sbjct: 238 -FINMIREEG--LRPTIPEDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 31/227 (13%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEYAPLGTVYREL--QKLSKFDE 110
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A P S+
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSR- 165
Query: 548 SDDIENSV--LPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYL 599
DD+ ++ LPP + D + +++S G+L E + GK P+ A+
Sbjct: 166 RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTY 214
Query: 600 NEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
E ++ + F E ++I +K + QRP + +++
Sbjct: 215 QETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 133
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A P S+
Sbjct: 134 QRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSR- 188
Query: 548 SDDIENSV--LPP------LADPETNIYSFGILMLEIISGKLPY 583
DD+ ++ LPP + D + +++S G+L E + GK P+
Sbjct: 189 RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 112
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A P S+
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRR 168
Query: 548 SDDIEN-SVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLN 600
+D LPP + D + +++S G+L E + GK P+ A+
Sbjct: 169 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQ 217
Query: 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
E ++ + F E ++I +K + QRP + +++
Sbjct: 218 ETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 108
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A P S+
Sbjct: 109 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRR 164
Query: 548 SDDIEN-SVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLN 600
+D LPP + D + +++S G+L E + GK P+ A+
Sbjct: 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQ 213
Query: 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
E ++ + F E ++I +K + QRP + +++
Sbjct: 214 ETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 107
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A P S+
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRR 163
Query: 548 SDDIEN-SVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLN 600
+D LPP + D + +++S G+L E + GK P+ A+
Sbjct: 164 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQ 212
Query: 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
E ++ + F E ++I +K + QRP + +++
Sbjct: 213 ETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 107
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A P S+
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRR 163
Query: 548 SDDIEN-SVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLN 600
+D LPP + D + +++S G+L E + GK P+ A+
Sbjct: 164 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQ 212
Query: 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
E ++ + F E ++I +K + QRP + +++
Sbjct: 213 ETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 108
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 109 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRT 165
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 166 TLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 214
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 215 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 433 KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIK-EMDHLDWNARM 491
++V + +NH N V L E ++ +V EYA G VF++L M + A+
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 492 RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI 551
R I+ +QY H + + H +L + + L D K+A+ F+ +K+ D+
Sbjct: 120 RQIVS---AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-DEF 172
Query: 552 ENSVLPPLA-----------DPETNIYSFGILMLEIISGKLPY 583
S PP A PE +++S G+++ ++SG LP+
Sbjct: 173 CGS--PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 107
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 164
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 165 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 213
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 214 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 107
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A P S+
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRR 163
Query: 548 SDDIEN-SVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLN 600
++ LPP + D + +++S G+L E + GK P+ A+
Sbjct: 164 TELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQ 212
Query: 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
E ++ + F E ++I +K + QRP + +++
Sbjct: 213 ETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 110
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA 167
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 168 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 216
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 217 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEYAPLGTVYREL--QKLSKFDE 111
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 112 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 168
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 217
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 218 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 259
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 13/162 (8%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDST--RVYLILEYAPLGTVYREL--QKLSKFDE 107
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 108 QRTATYITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA 164
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPY 583
+ LPP + D + +++S G+L E + GK P+
Sbjct: 165 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 112
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 170 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 218
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 219 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 51 EHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEYAPLGTVYREL--QKLSKFDE 106
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 107 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 163
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 164 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 212
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 213 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 254
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 133
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 134 QRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 190
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 191 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 239
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 240 TYKRISRVEFTFPDFV---TEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 110
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 167
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 216
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 217 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEYAPLGTVYREL--QKLSKFDE 107
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA 164
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 165 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 213
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 214 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 69 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 124
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 125 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 181
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 182 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 230
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 231 TYKRISRVEFTFPDFV---TEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 32/193 (16%)
Query: 406 SGVEIAVA---ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462
+G E+AV T + SS S + +R +V + +NH N V L E ++
Sbjct: 38 TGKEVAVKIIDKTQLNSS-----SLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTL--Y 89
Query: 463 MVFEYAPNGTVFEHLHIK-EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHC 521
+V EYA G VF++L M + A+ R I+ +QY H + + H +L +
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKF---IVHRDLKAEN 143
Query: 522 IYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA-----------DPETNIYSFG 570
+ L D K+A+ F+ +K+ D S PP A PE +++S G
Sbjct: 144 LLLDADMNIKIADFGFSNEFTFGNKL-DTFCGS--PPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 571 ILMLEIISGKLPY 583
+++ ++SG LP+
Sbjct: 201 VILYTLVSGSLPF 213
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 32/193 (16%)
Query: 406 SGVEIAVA---ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462
+G E+AV T + SS S + +R +V + +NH N V L E ++
Sbjct: 38 TGKEVAVKIIDKTQLNSS-----SLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTL--Y 89
Query: 463 MVFEYAPNGTVFEHLHIK-EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHC 521
+V EYA G VF++L M + A+ R I+ +QY H + + H +L +
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKF---IVHRDLKAEN 143
Query: 522 IYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA-----------DPETNIYSFG 570
+ L D K+A+ F+ +K+ D S PP A PE +++S G
Sbjct: 144 LLLDADMNIKIADFGFSNEFTFGNKL-DTFCGS--PPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 571 ILMLEIISGKLPY 583
+++ ++SG LP+
Sbjct: 201 VILYTLVSGSLPF 213
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 110
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 167
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 216
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 217 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 49 EHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEYAPLGTVYREL--QKLSKFDE 104
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 105 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 161
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 162 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 210
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 211 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 252
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 90/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP G V++ L +++ D
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPRGEVYKEL--QKLSKFDE 112
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX 169
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 170 XLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 218
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 219 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 260
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 23/163 (14%)
Query: 433 KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIK-EMDHLDWNARM 491
++V + +NH N V L E ++ +V EYA G VF++L M + A+
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 492 RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI 551
R I+ +QY H + + H +L + + L D K+A+ F+ +K+ D
Sbjct: 120 RQIVS---AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-DTF 172
Query: 552 ENSVLPPLA-----------DPETNIYSFGILMLEIISGKLPY 583
S PP A PE +++S G+++ ++SG LP+
Sbjct: 173 CGS--PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP G V++ L +++ D
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPRGEVYKEL--QKLSKFDE 112
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 170 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 218
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 219 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 108
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A P S+
Sbjct: 109 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSR- 163
Query: 548 SDDIENSV--LPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYL 599
D + ++ LPP + D + +++S G+L E + GK P+ A+
Sbjct: 164 RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTY 212
Query: 600 NEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
E ++ + F E ++I +K + QRP + +++
Sbjct: 213 QETYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEYAPLGTVYREL--QKLSKFDE 107
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 164
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 165 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 213
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 214 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 23/163 (14%)
Query: 433 KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIK-EMDHLDWNARM 491
++V + +NH N V L E ++ +V EYA G VF++L M + A+
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEARAKF 120
Query: 492 RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI 551
R I+ +QY H + + H +L + + L D K+A+ F+ +K+ D
Sbjct: 121 RQIVS---AVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL-DTF 173
Query: 552 ENSVLPPLA-----------DPETNIYSFGILMLEIISGKLPY 583
S PP A PE +++S G+++ ++SG LP+
Sbjct: 174 CGS--PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 109
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A ++ A +
Sbjct: 110 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT 166
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 167 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 215
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 216 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 257
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 112
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP D + +++S G+L E + GK P+ A+ E
Sbjct: 170 TLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 218
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 219 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPXLREVL 260
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 110
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A ++ A +
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT 167
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
+ LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 216
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 217 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEYAPLGTVYREL--QKLSKFDE 107
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX 164
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 165 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 213
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 214 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 109
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 110 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX 166
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 167 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 215
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 216 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 257
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 13/162 (8%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSRFDE 111
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L + K+A+ ++ A +
Sbjct: 112 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRT 168
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPY 583
+ LPP + D + +++S G+L E + G P+
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 32/193 (16%)
Query: 406 SGVEIAVA---ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462
+G E+AV T + SS S + +R +V + +NH N V L E ++
Sbjct: 31 TGKEVAVKIIDKTQLNSS-----SLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTL--Y 82
Query: 463 MVFEYAPNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHC 521
+V EYA G VF++L M + A+ R I+ +QY H + + H +L +
Sbjct: 83 LVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVS---AVQYCHQKF---IVHRDLKAEN 136
Query: 522 IYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA-----------DPETNIYSFG 570
+ L D K+A+ F+ +K+ D S PP A PE +++S G
Sbjct: 137 LLLDADMNIKIADFGFSNEFTFGNKL-DTFCGS--PPYAAPELFQGKKYDGPEVDVWSLG 193
Query: 571 ILMLEIISGKLPY 583
+++ ++SG LP+
Sbjct: 194 VILYTLVSGSLPF 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 27/225 (12%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSKFDE 110
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L K+A+ ++ A +
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX 167
Query: 548 SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601
LPP + D + +++S G+L E + GK P+ A+ E
Sbjct: 168 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-----------EANTYQE 216
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
++ + F E ++I +K + QRP + +++
Sbjct: 217 TYKRISRVEFTFPDFVT---EGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 32/193 (16%)
Query: 406 SGVEIAVA---ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462
+G E+AV T + SS S + +R +V + +NH N V L E ++
Sbjct: 38 TGKEVAVKIIDKTQLNSS-----SLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTL--Y 89
Query: 463 MVFEYAPNGTVFEHLHIK-EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHC 521
+V EYA G VF++L M + A+ R I+ +QY H + + H +L +
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKF---IVHRDLKAEN 143
Query: 522 IYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA-----------DPETNIYSFG 570
+ L D K+A+ F+ +K+ D + PP A PE +++S G
Sbjct: 144 LLLDADMNIKIADFGFSNEFTFGNKL-DAFCGA--PPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 571 ILMLEIISGKLPY 583
+++ ++SG LP+
Sbjct: 201 VILYTLVSGSLPF 213
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYREL--QKLSRFDE 111
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
I A L Y H + V H ++ + L + K+A+ ++ A P S+
Sbjct: 112 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHA-PSSR- 166
Query: 548 SDDIENSV--LPP------LADPETNIYSFGILMLEIISGKLPY 583
D + ++ LPP + D + +++S G+L E + G P+
Sbjct: 167 RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 126/295 (42%), Gaps = 45/295 (15%)
Query: 378 LELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDT 437
LE+D A II +Y+ G E+AV A +D ++ E R++
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYR-AFWIGDEVAVKAARHDPDEDISQTIE-NVRQEAKL 59
Query: 438 LSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH---LDWNARMRII 494
+ + H N + L G C EP N +V E+A G + L K + ++W ++
Sbjct: 60 FAMLKHPNIIALRGVCLK-EP-NLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI--- 114
Query: 495 MGTAYCLQYMHHELNPPVAHSNLSSHCIYL-----TDDYAAKVAEICFTTIALPK----- 544
A + Y+H E P+ H +L S I + D + K+ +I T L +
Sbjct: 115 ---ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI--TDFGLAREWHRT 169
Query: 545 SKVSDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAA-D 597
+K+S + + P + ++++S+G+L+ E+++G++P+ L++ A +
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN 229
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
L P +C E +++++C D RP+ +I+ QL +
Sbjct: 230 KLALPIPSTCP-------------EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 433 KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIK-EMDHLDWNARM 491
++V + +NH N V L E ++ ++ EYA G VF++L M + ++
Sbjct: 60 REVRIMKILNHPNIVKLFEVIETEKTL--YLIMEYASGGEVFDYLVAHGRMKEKEARSKF 117
Query: 492 RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI 551
R I+ +QY H + + H +L + + L D K+A+ F+ K+ D
Sbjct: 118 RQIVS---AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL-DTF 170
Query: 552 ENSVLPPLA-----------DPETNIYSFGILMLEIISGKLPY 583
S PP A PE +++S G+++ ++SG LP+
Sbjct: 171 CGS--PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + ++++ H N V L+G + E +V EY G++ ++L + L +
Sbjct: 51 AFLAEASVMTQLRHSNLVQLLGVIVE-EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 109
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA-----LPK 544
++ + ++Y+ H +L++ + +++D AKV++ T A K
Sbjct: 110 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 166
Query: 545 SKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPR 603
V ++ +++++SFGIL+ EI S G++PY PR
Sbjct: 167 LPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY------------------PR 208
Query: 604 NFSCMIDPSL-KSFKQNELE----AICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+ P + K +K + + A+ EV+K C D RP+ + QL +
Sbjct: 209 IPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNN 129
NG + LDM L G + ++G + L L L N SG IP S+N
Sbjct: 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690
Query: 130 KLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
KL G IP +S L L + L NN G IP E+ +F +F
Sbjct: 691 KLDGRIPQAMSALTMLTEIDLSNNNLSGPIP-EMGQFETFPPAKF 734
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNNKL 131
K++ L + LEG + +L + L L+L N +G IP SNN+L
Sbjct: 443 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRL 502
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLEL 163
+G IP I RL +L L L NN F G+IP EL
Sbjct: 503 TGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%)
Query: 77 DMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNNKLSGIIP 136
++ R G +P + FL + N SG IPK +N +SG IP
Sbjct: 614 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673
Query: 137 VEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
E+ L L L L +NK +G IP +S T+L+E+ +
Sbjct: 674 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 69 LNGKVQMLDMKERSLEGTLAPDLGK--LSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXX 126
L+ + LD+ + G + P+L + + L+ L LQ N F+G IP
Sbjct: 366 LSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHL 425
Query: 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFD 175
S N LSG IP + L L+ L L N EG IP EL L L D
Sbjct: 426 SFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 83 LEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNNKLSGIIPVEISRL 142
L GT+ LG LS LR L L N G IP+ N L+G IP +S
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 489
Query: 143 PSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS----AEVAGIRSV 189
+L + L NN+ G IP + R L+ L+ + S AE+ RS+
Sbjct: 490 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 540
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%)
Query: 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNNKLS 132
++ L + L G + L ++L ++ L N +G IPK SNN S
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIP 160
G IP E+ SL L L N F G+IP
Sbjct: 528 GNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNNK 130
G+++ L + + G + D+ + +L FL + N+FS IP S NK
Sbjct: 178 GELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNK 234
Query: 131 LSGIIPVEISRLPSLKRLLLGNNKFEGSI---PLELSRFTLLSELQFD----DYLTSA 181
LSG IS LK L + +N+F G I PL+ ++ L+E +F D+L+ A
Sbjct: 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGA 292
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNN 129
NG + LDM L G + ++G + L L L N SG IP S+N
Sbjct: 628 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 687
Query: 130 KLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
KL G IP +S L L + L NN G IP E+ +F +F
Sbjct: 688 KLDGRIPQAMSALTMLTEIDLSNNNLSGPIP-EMGQFETFPPAKF 731
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNNKL 131
K++ L + LEG + +L + L L+L N +G IP SNN+L
Sbjct: 440 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRL 499
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLEL 163
+G IP I RL +L L L NN F G+IP EL
Sbjct: 500 TGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%)
Query: 77 DMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNNKLSGIIP 136
++ R G +P + FL + N SG IPK +N +SG IP
Sbjct: 611 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 670
Query: 137 VEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
E+ L L L L +NK +G IP +S T+L+E+ +
Sbjct: 671 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 710
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 69 LNGKVQMLDMKERSLEGTLAPDLGK--LSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXX 126
L+ + LD+ + G + P+L + + L+ L LQ N F+G IP
Sbjct: 363 LSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHL 422
Query: 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFD 175
S N LSG IP + L L+ L L N EG IP EL L L D
Sbjct: 423 SFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 471
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 83 LEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNNKLSGIIPVEISRL 142
L GT+ LG LS LR L L N G IP+ N L+G IP +S
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 486
Query: 143 PSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS----AEVAGIRSV 189
+L + L NN+ G IP + R L+ L+ + S AE+ RS+
Sbjct: 487 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 537
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%)
Query: 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNNKLS 132
++ L + L G + L ++L ++ L N +G IPK SNN S
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 524
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIP 160
G IP E+ SL L L N F G+IP
Sbjct: 525 GNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNNK 130
G+++ L + + G + D+ + +L FL + N+FS IP S NK
Sbjct: 175 GELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNK 231
Query: 131 LSGIIPVEISRLPSLKRLLLGNNKFEGSI---PLELSRFTLLSELQFD----DYLTSA 181
LSG IS LK L + +N+F G I PL+ ++ L+E +F D+L+ A
Sbjct: 232 LSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGA 289
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 23/241 (9%)
Query: 385 EDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
++F I + +G SSG +AV + + +E+ + +V + H+
Sbjct: 77 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLF-NEVVIMRDYQHE 131
Query: 445 NFVNLI-GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY 503
N V + Y DE + +V E+ G + + + M+ A + + L
Sbjct: 132 NVVEMYNSYLVGDELW---VVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSV 185
Query: 504 MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF---TTIALPKSKVSDDIENSVLPPLA 560
+H + V H ++ S I LT D K+++ F + +P+ K + P L
Sbjct: 186 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 242
Query: 561 D-----PETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615
PE +I+S GI+++E++ G+ PY E L K D L + PSLK
Sbjct: 243 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKG 302
Query: 616 F 616
F
Sbjct: 303 F 303
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 23/241 (9%)
Query: 385 EDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
++F I + +G SSG +AV + + +E+ + +V + H+
Sbjct: 154 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLF-NEVVIMRDYQHE 208
Query: 445 NFVNLI-GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY 503
N V + Y DE + +V E+ G + + + M+ A + + L
Sbjct: 209 NVVEMYNSYLVGDELW---VVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSV 262
Query: 504 MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF---TTIALPKSKVSDDIENSVLPPLA 560
+H + V H ++ S I LT D K+++ F + +P+ K + P L
Sbjct: 263 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 319
Query: 561 D-----PETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615
PE +I+S GI+++E++ G+ PY E L K D L + PSLK
Sbjct: 320 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKG 379
Query: 616 F 616
F
Sbjct: 380 F 380
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 23/241 (9%)
Query: 385 EDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
++F I + +G SSG +AV + + +E+ + +V + H+
Sbjct: 34 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLF-NEVVIMRDYQHE 88
Query: 445 NFVNLI-GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY 503
N V + Y DE + +V E+ G + + + M+ A + + L
Sbjct: 89 NVVEMYNSYLVGDELW---VVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSV 142
Query: 504 MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF---TTIALPKSKVSDDIENSVLPPLA 560
+H + V H ++ S I LT D K+++ F + +P+ K + P L
Sbjct: 143 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 199
Query: 561 D-----PETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615
PE +I+S GI+++E++ G+ PY E L K D L + PSLK
Sbjct: 200 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKG 259
Query: 616 F 616
F
Sbjct: 260 F 260
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 103/234 (44%), Gaps = 33/234 (14%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + ++++ H N V L+G + E +V EY G++ ++L + L +
Sbjct: 60 AFLAEASVMTQLRHSNLVQLLGVIVE-EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 118
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA-----LPK 544
++ + ++Y+ E N V H +L++ + +++D AKV++ T A K
Sbjct: 119 LLKFSLDVCEAMEYL--EGNNFV-HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 175
Query: 545 SKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPR 603
V ++ +++++SFGIL+ EI S G++PY PR
Sbjct: 176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY------------------PR 217
Query: 604 NFSCMIDPSL-KSFKQNELE----AICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+ P + K +K + + A+ EV+K C D RP+ + QL +
Sbjct: 218 IPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 23/241 (9%)
Query: 385 EDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
++F I + +G SSG +AV + + +E+ + +V + H+
Sbjct: 32 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLF-NEVVIMRDYQHE 86
Query: 445 NFVNLI-GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY 503
N V + Y DE + +V E+ G + + + M+ A + + L
Sbjct: 87 NVVEMYNSYLVGDELW---VVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSV 140
Query: 504 MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF---TTIALPKSKVSDDIENSVLPPLA 560
+H + V H ++ S I LT D K+++ F + +P+ K + P L
Sbjct: 141 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 197
Query: 561 D-----PETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615
PE +I+S GI+++E++ G+ PY E L K D L + PSLK
Sbjct: 198 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKG 257
Query: 616 F 616
F
Sbjct: 258 F 258
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 23/163 (14%)
Query: 433 KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIK-EMDHLDWNARM 491
++V + +NH N V L E ++ ++ EYA G VF++L M + ++
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTL--YLIMEYASGGEVFDYLVAHGRMKEKEARSKF 120
Query: 492 RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI 551
R I+ +QY H + + H +L + + L D K+A+ F+ K+
Sbjct: 121 RQIVS---AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD--- 171
Query: 552 ENSVLPPLA-----------DPETNIYSFGILMLEIISGKLPY 583
PP A PE +++S G+++ ++SG LP+
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 23/241 (9%)
Query: 385 EDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
++F I + +G SSG +AV + + +E+ + +V + H+
Sbjct: 23 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLF-NEVVIMRDYQHE 77
Query: 445 NFVNLI-GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY 503
N V + Y DE + +V E+ G + + + M+ A + + L
Sbjct: 78 NVVEMYNSYLVGDELW---VVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSV 131
Query: 504 MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF---TTIALPKSKVSDDIENSVLPPLA 560
+H + V H ++ S I LT D K+++ F + +P+ K + P L
Sbjct: 132 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 188
Query: 561 D-----PETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615
PE +I+S GI+++E++ G+ PY E L K D L + PSLK
Sbjct: 189 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKG 248
Query: 616 F 616
F
Sbjct: 249 F 249
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 23/241 (9%)
Query: 385 EDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
++F I + +G SSG +AV + + +E+ + +V + H+
Sbjct: 27 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLF-NEVVIMRDYQHE 81
Query: 445 NFVNLI-GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY 503
N V + Y DE + +V E+ G + + + M+ A + + L
Sbjct: 82 NVVEMYNSYLVGDELW---VVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSV 135
Query: 504 MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF---TTIALPKSKVSDDIENSVLPPLA 560
+H + V H ++ S I LT D K+++ F + +P+ K + P L
Sbjct: 136 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 192
Query: 561 D-----PETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615
PE +I+S GI+++E++ G+ PY E L K D L + PSLK
Sbjct: 193 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKG 252
Query: 616 F 616
F
Sbjct: 253 F 253
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + ++++ H N V L+G + E +V EY G++ ++L + L +
Sbjct: 45 AFLAEASVMTQLRHSNLVQLLGVIVE-EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA-----LPK 544
++ + ++Y+ H +L++ + +++D AKV++ T A K
Sbjct: 104 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160
Query: 545 SKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPR 603
V ++ +++++SFGIL+ EI S G++PY PR
Sbjct: 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY------------------PR 202
Query: 604 NFSCMIDPSL-KSFKQNELE----AICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+ P + K +K + + A+ EV+K C D RP+ + QL +
Sbjct: 203 IPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 256
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 34/194 (17%)
Query: 406 SGVEIAVA---ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462
+G E+AV T + SS S + +R +V +NH N V L E ++
Sbjct: 38 TGKEVAVKIIDKTQLNSS-----SLQKLFR-EVRIXKVLNHPNIVKLFEVIETEKTL--Y 89
Query: 463 MVFEYAPNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSH 520
+V EYA G VF++L H + + + A+ R I+ +QY H + + H +L +
Sbjct: 90 LVXEYASGGEVFDYLVAHGRXKEK-EARAKFRQIVS---AVQYCHQKF---IVHRDLKAE 142
Query: 521 CIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA-----------DPETNIYSF 569
+ L D K+A+ F+ +K+ PP A PE +++S
Sbjct: 143 NLLLDADXNIKIADFGFSNEFTFGNKLD---AFCGAPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 570 GILMLEIISGKLPY 583
G+++ ++SG LP+
Sbjct: 200 GVILYTLVSGSLPF 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 110/252 (43%), Gaps = 28/252 (11%)
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKE-MD 483
+S+ A+ ++ LSR+NH N V L G C + +V EYA G+++ LH E +
Sbjct: 43 ESERKAFIVELRQLSRVNHPNIVKLYGACLNP----VCLVMEYAEGGSLYNVLHGAEPLP 98
Query: 484 HLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC-FTTIAL 542
+ M + + + Y+H + H +L + L V +IC F T
Sbjct: 99 YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA--GGTVLKICDFGTACD 156
Query: 543 PKSKVSDDIENS--VLPPLAD-----PETNIYSFGILMLEIISGKLPYCEEKELSIE-KW 594
++ ++++ ++ + P + + + +++S+GI++ E+I+ + P+ E + W
Sbjct: 157 IQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW 216
Query: 595 AADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
A P P +K+ + I ++ C D QRP+M +I+ + ++
Sbjct: 217 AVHNGTRP--------PLIKNLPK----PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 264
Query: 655 ISPEQAVPRLSP 666
P P P
Sbjct: 265 YFPGADEPLQYP 276
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 41 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 96
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H NL++ I + +
Sbjct: 97 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRNLATRNILVEN 150
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 151 ENRVKIGDFGLTKV-LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 209
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 210 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 264
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 265 IMTECWNNNVNQRPSFRDLALRVDQI 290
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 103/234 (44%), Gaps = 33/234 (14%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + ++++ H N V L+G + E +V EY G++ ++L + L +
Sbjct: 232 AFLAEASVMTQLRHSNLVQLLGVIVE-EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 290
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA-----LPK 544
++ + ++Y+ E N V H +L++ + +++D AKV++ T A K
Sbjct: 291 LLKFSLDVCEAMEYL--EGNNFV-HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 347
Query: 545 SKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPR 603
V ++ +++++SFGIL+ EI S G++PY PR
Sbjct: 348 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY------------------PR 389
Query: 604 NFSCMIDPSL-KSFKQNELE----AICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+ P + K +K + + A+ +V+K C D RPT + QL +
Sbjct: 390 IPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 110/252 (43%), Gaps = 28/252 (11%)
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKE-MD 483
+S+ A+ ++ LSR+NH N V L G C + +V EYA G+++ LH E +
Sbjct: 42 ESERKAFIVELRQLSRVNHPNIVKLYGACLNP----VCLVMEYAEGGSLYNVLHGAEPLP 97
Query: 484 HLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC-FTTIAL 542
+ M + + + Y+H + H +L + L V +IC F T
Sbjct: 98 YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA--GGTVLKICDFGTACD 155
Query: 543 PKSKVSDDIENS--VLPPLAD-----PETNIYSFGILMLEIISGKLPYCEEKELSIE-KW 594
++ ++++ ++ + P + + + +++S+GI++ E+I+ + P+ E + W
Sbjct: 156 IQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW 215
Query: 595 AADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
A P P +K+ + I ++ C D QRP+M +I+ + ++
Sbjct: 216 AVHNGTRP--------PLIKNLPK----PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263
Query: 655 ISPEQAVPRLSP 666
P P P
Sbjct: 264 YFPGADEPLQYP 275
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 105/242 (43%), Gaps = 41/242 (16%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR----------M 491
HKN +NL+G C D P ++ EYA G + E+L +E L+++
Sbjct: 92 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 492 RIIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT----IALPKSK 546
+ ++ AY + + M + + H +L++ + +T+D K+A+ I K
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 547 VSDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAAD 597
+ + + P A +++++SFG+L+ EI + G PY +EL
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 270 RMDKPSNCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRIVALTS 314
Query: 658 EQ 659
Q
Sbjct: 315 NQ 316
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 112/264 (42%), Gaps = 44/264 (16%)
Query: 415 TAITSSKDWL-KSQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVFEYAPNGT 472
AI K++ K + +++ L ++ H N +NL+G CE + EYAP+G
Sbjct: 52 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL--YLAIEYAPHGN 109
Query: 473 VFEHLHIKEMDHLDWNARMRIIMGTAYCL---QYMHHELN----------PPVAHSNLSS 519
+ + L + L+ + I TA L Q +H + H NL++
Sbjct: 110 LLDFLRKSRV--LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAA 167
Query: 520 HCIYLTDDYAAKVAEI-------CFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGIL 572
I + ++Y AK+A+ + + + V S+ + ++++S+G+L
Sbjct: 168 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 227
Query: 573 MLEIIS-GKLPYCEEKELSI-EKWAADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629
+ EI+S G PYC + EK Y L +P N + + ++++
Sbjct: 228 LWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCD---------------DEVYDLMR 272
Query: 630 ECIKTDLRQRPTMNDIIVQLRQVI 653
+C + +RP+ I+V L +++
Sbjct: 273 QCWREKPYERPSFAQILVSLNRML 296
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 58 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 114 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 167
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 168 ENRVKIGDFGLTKV-LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 226
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 227 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 281
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 282 IMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 58 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 114 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 167
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 168 ENRVKIGDFGLTKV-LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 226
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 227 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 281
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 282 IMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 47 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 102
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 103 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 156
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 157 ENRVKIGDFGLTKV-LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 215
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 216 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 270
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 271 IMTECWNNNVNQRPSFRDLALRVDQI 296
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 40 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 96 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 149
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 150 ENRVKIGDFGLTKV-LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 209 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 263
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 264 IMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 71 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 126
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 127 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 180
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 181 ENRVKIGDFGLTKV-LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 239
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 240 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 294
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 295 IMTECWNNNVNQRPSFRDLALRVDQI 320
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 109/244 (44%), Gaps = 34/244 (13%)
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL--HIKEMDHLDWN 488
+ ++++ L + H N V G C N ++ EY P G++ ++L H + +DH+
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI--- 117
Query: 489 ARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS 548
+++ T+ + M + H +L++ I + ++ K+ + T + LP+ K
Sbjct: 118 ---KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEX 173
Query: 549 DDIENSVLPPL--ADPE----------TNIYSFGILMLEIISGKLPYCEEKELSIEKWAA 596
++ P+ PE ++++SFG+++ E+ + Y E+ + ++
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMR 229
Query: 597 DYLNEPRNFSCMIDPSLKSFKQNEL--------EAICEVIKECIKTDLRQRPTMNDIIVQ 648
N+ + ++ ++ K N + I ++ EC ++ QRP+ D+ ++
Sbjct: 230 MIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR 288
Query: 649 LRQV 652
+ Q+
Sbjct: 289 VDQI 292
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 45 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 100
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 101 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 154
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 155 ENRVKIGDFGLTKV-LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 213
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 214 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 268
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 269 IMTECWNNNVNQRPSFRDLALRVDQI 294
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 114/265 (43%), Gaps = 40/265 (15%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
T+YKG L + + VA + K KS+ ++++ + L + H N V E
Sbjct: 41 TVYKG-LDTETTVEVAWCELQDRK-LTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTV 98
Query: 458 PFNR--MMVFEYAPNGTVFEHLH---IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPV 512
+ ++V E +GT+ +L + ++ L R +I+ G LQ++H PP+
Sbjct: 99 KGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCR-QILKG----LQFLHTR-TPPI 152
Query: 513 AHSNLSSHCIYLTDDYAA-KVAEICFTT----------IALPKSKVSDDIENSVLPPLAD 561
H +L I++T + K+ ++ T I P+ + E D
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEEKY-----D 207
Query: 562 PETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
++Y+FG LE + + PY E + A Y R + + P+ SF + +
Sbjct: 208 ESVDVYAFGXCXLEXATSEYPYSE-----CQNAAQIY----RRVTSGVKPA--SFDKVAI 256
Query: 622 EAICEVIKECIKTDLRQRPTMNDII 646
+ E+I+ CI+ + +R ++ D++
Sbjct: 257 PEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%)
Query: 81 RSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNNKLSGIIPVEIS 140
+L G + P + KL+ L +L + + SG IP S N LSG +P IS
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 141 RLPSLKRLLLGNNKFEGSIPLELSRFTLL 169
LP+L + N+ G+IP F+ L
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKL 175
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Query: 76 LDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXX-XXXXXXXXXSNNKLSGI 134
LD +L GTL P + L +L + N SG IP S N+L+G
Sbjct: 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK 189
Query: 135 IPVEISRLPSLKRLLLGNNKFEG 157
IP + L +L + L N EG
Sbjct: 190 IPPTFANL-NLAFVDLSRNMLEG 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 46 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 101
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 102 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 155
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 156 ENRVKIGDFGLTKV-LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 214
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 215 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 269
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 270 IMTECWNNNVNQRPSFRDLALRVDQI 295
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 43 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 99 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 152
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 153 ENRVKIGDFGLTKV-LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 211
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 212 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 266
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 267 IMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ E+
Sbjct: 43 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFL 98
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ E+L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 99 PYGSLREYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 152
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 153 ENRVKIGDFGLTKV-LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 211
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 212 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 266
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 267 IMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 38 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 93
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 94 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 147
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 148 ENRVKIGDFGLTKV-LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 206
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 207 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 261
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 262 IMTECWNNNVNQRPSFRDLALRVDQI 287
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 44 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 99
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 100 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 153
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 154 ENRVKIGDFGLTKV-LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 212
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 213 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 267
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 268 IMTECWNNNVNQRPSFRDLALRVDQI 293
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/281 (17%), Positives = 119/281 (42%), Gaps = 27/281 (9%)
Query: 380 LDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLS 439
+D +F ++ ++KG G +I V + +DW + + ++ L
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKV---RDWSTRKSRDFNEECPRLR 62
Query: 440 RINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAY 499
+H N + ++G C+ + ++ + P G+++ LH +D + ++ + A
Sbjct: 63 IFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMAR 122
Query: 500 CLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKV--AEICFTTIALPKSKVSDDIENSVLP 557
+ ++ H L P + L+S + + +D A++ A++ F+ + + + L
Sbjct: 123 GMAFL-HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEAL- 180
Query: 558 PLADPE------TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611
PE +++SF +L+ E+++ ++P+ + + I A P I P
Sbjct: 181 -QKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP-----TIPP 234
Query: 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+ + +++K C+ D +RP + I+ L ++
Sbjct: 235 GISPH-------VSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 40 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 96 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 149
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 150 ENRVKIGDFGLTKV-LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 209 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 263
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 264 IMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 39 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 94
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 95 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 148
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 149 ENRVKIGDFGLTKV-LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 207
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 208 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 262
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 263 IMTECWNNNVNQRPSFRDLALRVDQI 288
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 41/248 (16%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWN----------ARM 491
HKN +NL+G C D P ++ EYA G + E+L + L+++
Sbjct: 92 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 492 RIIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT----IALPKSK 546
+ ++ AY + + M + + H +L++ + +T+D K+A+ I K
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 547 VSDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAAD 597
+ + + P A +++++SFG+L+ EI + G PY +EL
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 270 RMDKPSNCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRIVALTS 314
Query: 658 EQAVPRLS 665
Q LS
Sbjct: 315 NQEXLDLS 322
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 105/243 (43%), Gaps = 41/243 (16%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR----------MR 492
HKN +NL+G C D P ++ EYA G + E+L + L+++ +
Sbjct: 134 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 493 IIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT----IALPKSKV 547
++ AY + + M + + H +L++ + +T+D K+A+ I K
Sbjct: 192 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+L+ EI + G PY +EL
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 311
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 312 MDKPSNCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356
Query: 659 QAV 661
Q +
Sbjct: 357 QEM 359
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 104/242 (42%), Gaps = 41/242 (16%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR----------M 491
HKN +NL+G C D P ++ EYA G + E+L + L+++
Sbjct: 84 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 492 RIIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT----IALPKSK 546
+ ++ AY + + M + + H +L++ + +T+D K+A+ I K
Sbjct: 142 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 547 VSDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAAD 597
+ + + P A +++++SFG+L+ EI + G PY +EL
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 261
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 262 RMDKPSNCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRIVALTS 306
Query: 658 EQ 659
Q
Sbjct: 307 NQ 308
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 104/242 (42%), Gaps = 41/242 (16%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR----------M 491
HKN +NL+G C D P ++ EYA G + E+L + L+++
Sbjct: 92 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 492 RIIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT----IALPKSK 546
+ ++ AY + + M + + H +L++ + +T+D K+A+ I K
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 547 VSDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAAD 597
+ + + P A +++++SFG+L+ EI + G PY +EL
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 270 RMDKPSNCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRIVALTS 314
Query: 658 EQ 659
Q
Sbjct: 315 NQ 316
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 104/242 (42%), Gaps = 41/242 (16%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR----------M 491
HKN +NL+G C D P ++ EYA G + E+L + L+++
Sbjct: 85 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
Query: 492 RIIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT----IALPKSK 546
+ ++ AY + + M + + H +L++ + +T+D K+A+ I K
Sbjct: 143 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 547 VSDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAAD 597
+ + + P A +++++SFG+L+ EI + G PY +EL
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 262
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 263 RMDKPSNCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRIVALTS 307
Query: 658 EQ 659
Q
Sbjct: 308 NQ 309
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/266 (18%), Positives = 117/266 (43%), Gaps = 38/266 (14%)
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
E+ S+++ L+ + ++++ L + H N V G C N ++ EY
Sbjct: 40 EVVAVKKLQHSTEEHLRD----FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 469 PNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526
P G++ ++L H + +DH+ +++ T+ + M + H +L++ I + +
Sbjct: 96 PYGSLRDYLQKHKERIDHI------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 149
Query: 527 DYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--ADPE----------TNIYSFGILML 574
+ K+ + T + LP+ K ++ P+ PE ++++SFG+++
Sbjct: 150 ENRVKIGDFGLTKV-LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--------EAICE 626
E+ + Y E+ + ++ N+ + ++ ++ K N + I
Sbjct: 209 ELFT----YIEKSKSPPAEFMRMIGNDKQG-QMIVFHLIELLKNNGRLPRPDGCPDEIYM 263
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQV 652
++ EC ++ QRP+ D+ +++ Q+
Sbjct: 264 IMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 112/264 (42%), Gaps = 44/264 (16%)
Query: 415 TAITSSKDWL-KSQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVFEYAPNGT 472
AI K++ K + +++ L ++ H N +NL+G CE + EYAP+G
Sbjct: 55 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL--YLAIEYAPHGN 112
Query: 473 VFEHLHIKEMDHLDWNARMRIIMGTAYCL---QYMHHELN----------PPVAHSNLSS 519
+ + L + L+ + I TA L Q +H + H +L++
Sbjct: 113 LLDFLRKSRV--LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 170
Query: 520 HCIYLTDDYAAKVAEI-------CFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGIL 572
I + ++Y AK+A+ + + + V S+ + ++++S+G+L
Sbjct: 171 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 230
Query: 573 MLEIIS-GKLPYCEEKELSI-EKWAADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629
+ EI+S G PYC + EK Y L +P N + + ++++
Sbjct: 231 LWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCD---------------DEVYDLMR 275
Query: 630 ECIKTDLRQRPTMNDIIVQLRQVI 653
+C + +RP+ I+V L +++
Sbjct: 276 QCWREKPYERPSFAQILVSLNRML 299
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 104/242 (42%), Gaps = 41/242 (16%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR----------M 491
HKN +NL+G C D P ++ EYA G + E+L + L+++
Sbjct: 81 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 492 RIIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT----IALPKSK 546
+ ++ AY + + M + + H +L++ + +T+D K+A+ I K
Sbjct: 139 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 547 VSDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAAD 597
+ + + P A +++++SFG+L+ EI + G PY +EL
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 258
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 259 RMDKPSNCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRIVALTS 303
Query: 658 EQ 659
Q
Sbjct: 304 NQ 305
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 105/248 (42%), Gaps = 41/248 (16%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW----------NARM 491
HKN +NL+G C D P ++ EYA G + E+L + L++
Sbjct: 92 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 492 RIIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT----IALPKSK 546
+ ++ AY + + M + + H +L++ + +T+D K+A+ I K
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 547 VSDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAAD 597
+ + + P A +++++SFG+L+ EI + G PY +EL
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 270 RMDKPSNCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRIVALTS 314
Query: 658 EQAVPRLS 665
Q LS
Sbjct: 315 NQEYLDLS 322
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 22/179 (12%)
Query: 420 SKDWLKSQEMAYR--KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL 477
S+ LK +M R +++ L + H + + L Y P + +MV EYA G +F+++
Sbjct: 43 SRQLLKKSDMHMRVEREISYLKLLRHPHIIKL--YDVITTPTDIVMVIEYA-GGELFDYI 99
Query: 478 HIKEMDHLDWNARM--RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535
K+ D R +II YC ++ + H +L + L D+ K+A+
Sbjct: 100 VEKKRMTEDEGRRFFQQIICAIEYCHRH-------KIVHRDLKPENLLLDDNLNVKIADF 152
Query: 536 CFTTIALPKS--KVSDDIENSVLPPL------ADPETNIYSFGILMLEIISGKLPYCEE 586
+ I + K S N P + A PE +++S GI++ ++ G+LP+ +E
Sbjct: 153 GLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 103/242 (42%), Gaps = 41/242 (16%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW----------NARM 491
HKN +NL+G C D P ++ EYA G + E+L + L++
Sbjct: 77 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 492 RIIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT----IALPKSK 546
+ ++ AY + + M + + H +L++ + +T+D K+A+ I K
Sbjct: 135 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 547 VSDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAAD 597
+ + + P A +++++SFG+L+ EI + G PY +EL
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 254
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 255 RMDKPSNCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRIVALTS 299
Query: 658 EQ 659
Q
Sbjct: 300 NQ 301
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 112/264 (42%), Gaps = 44/264 (16%)
Query: 415 TAITSSKDWL-KSQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVFEYAPNGT 472
AI K++ K + +++ L ++ H N +NL+G CE + EYAP+G
Sbjct: 45 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL--YLAIEYAPHGN 102
Query: 473 VFEHLHIKEMDHLDWNARMRIIMGTAYCL---QYMHHELN----------PPVAHSNLSS 519
+ + L + L+ + I TA L Q +H + H +L++
Sbjct: 103 LLDFLRKSRV--LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 160
Query: 520 HCIYLTDDYAAKVAEI-------CFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGIL 572
I + ++Y AK+A+ + + + V S+ + ++++S+G+L
Sbjct: 161 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 220
Query: 573 MLEIIS-GKLPYCEEKELSI-EKWAADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629
+ EI+S G PYC + EK Y L +P N + + ++++
Sbjct: 221 LWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCD---------------DEVYDLMR 265
Query: 630 ECIKTDLRQRPTMNDIIVQLRQVI 653
+C + +RP+ I+V L +++
Sbjct: 266 QCWREKPYERPSFAQILVSLNRML 289
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E + ++ + ++H+ V L G C P ++ EY NG + +L +EM H +
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYL--REMRH-RF 117
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
+ + M C + M + + H +L++ + D KV++ + L +
Sbjct: 118 QTQQLLEMCKDVC-EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEET 176
Query: 548 SDDIENSVLPPLADP-----------ETNIYSFGILMLEIIS-GKLPY 583
S S P P +++I++FG+LM EI S GK+PY
Sbjct: 177 SS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/214 (17%), Positives = 93/214 (43%), Gaps = 15/214 (7%)
Query: 380 LDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLS 439
+D +F ++ ++KG G +I V + +DW + + ++ L
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKV---RDWSTRKSRDFNEECPRLR 62
Query: 440 RINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAY 499
+H N + ++G C+ + ++ + P G+++ LH +D + ++ + A
Sbjct: 63 IFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXAR 122
Query: 500 CLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKV--AEICFTTIALPKSKVSDDIENSVLP 557
++ H L P + L+S + + +D A++ A++ F+ + + + L
Sbjct: 123 GXAFL-HTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEAL- 180
Query: 558 PLADPE------TNIYSFGILMLEIISGKLPYCE 585
PE + +SF +L+ E+++ ++P+ +
Sbjct: 181 -QKKPEDTNRRSADXWSFAVLLWELVTREVPFAD 213
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 102/241 (42%), Gaps = 41/241 (17%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR---------- 492
HKN +NL+G C D P ++ EYA G + E+L + ++++ +
Sbjct: 87 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 493 -IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSKV 547
++ T + M + + H +L++ + +T++ K+A+ I K
Sbjct: 145 DLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 264
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 265 MDKPANCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 309
Query: 659 Q 659
Q
Sbjct: 310 Q 310
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 93 FFVKLYFTFQDDEKL--YFGLSYAKNGCLLK--YIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 206 LTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E + ++ + ++H+ V L G C P ++ EY NG + +L +EM H +
Sbjct: 48 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYL--REMRH-RF 102
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
+ + M C + M + + H +L++ + D KV++ + L
Sbjct: 103 QTQQLLEMCKDVC-EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 161
Query: 548 SDDIENSVLPPLADP-----------ETNIYSFGILMLEIIS-GKLPY 583
S S P P +++I++FG+LM EI S GK+PY
Sbjct: 162 SS--RGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 93 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 206 LTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 104/247 (42%), Gaps = 41/247 (16%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR---------- 492
HKN +NL+G C D P ++ EYA G + E+L + ++++ +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 493 -IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSKV 547
++ T + M + + H +L++ + +T++ K+A+ I K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 278 MDKPANCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
Query: 659 QAVPRLS 665
+ LS
Sbjct: 323 EEYLDLS 329
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E + ++ + ++H+ V L G C P ++ EY NG + +L +EM H +
Sbjct: 63 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYL--REMRH-RF 117
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK--- 544
+ + M C + M + + H +L++ + D KV++ + L
Sbjct: 118 QTQQLLEMCKDVC-EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176
Query: 545 SKVSDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY 583
S V PP +++I++FG+LM EI S GK+PY
Sbjct: 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 366 KAFVTGV-PKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWL 424
K V GV P ++ E++ + + +Y+G + ++ T +D +
Sbjct: 199 KPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKEDTM 255
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH 484
+ +E + K+ + I H N V L+G C + PF ++ E+ G + ++L +E +
Sbjct: 256 EVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYL--RECNR 309
Query: 485 LDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI------- 535
+ NA + + M T + ++Y+ + H NL++ + +++ KVA+
Sbjct: 310 QEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 366
Query: 536 --CFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPY 583
+T A K + S+ ++++++FG+L+ EI + G PY
Sbjct: 367 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 366 KAFVTGV-PKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWL 424
K V GV P ++ E++ + + +Y+G + ++ T +D +
Sbjct: 241 KPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKEDTM 297
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH 484
+ +E + K+ + I H N V L+G C + PF ++ E+ G + ++L +E +
Sbjct: 298 EVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYL--RECNR 351
Query: 485 LDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI------- 535
+ NA + + M T + ++Y+ + H NL++ + +++ KVA+
Sbjct: 352 QEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 408
Query: 536 --CFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPY 583
+T A K + S+ ++++++FG+L+ EI + G PY
Sbjct: 409 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 101/239 (42%), Gaps = 41/239 (17%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR--------- 492
HKN +NL+G C D P ++ EYA G + E+L + ++++ +
Sbjct: 145 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 493 --IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSK 546
++ T + M + + H +L++ + +T++ K+A+ I K
Sbjct: 203 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 547 VSDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAAD 597
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH 322
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 323 RMDKPANCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLT 366
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 101/238 (42%), Gaps = 41/238 (17%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR---------- 492
HKN +NL+G C D P ++ EYA G + E+L + ++++ +
Sbjct: 89 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 493 -IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSKV 547
++ T + M + + H +L++ + +T++ K+A+ I K
Sbjct: 147 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 266
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 267 MDKPANCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLT 309
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E + ++ + ++H+ V L G C P ++ EY NG + +L +EM H +
Sbjct: 54 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYL--REMRH-RF 108
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK--- 544
+ + M C + M + + H +L++ + D KV++ + L
Sbjct: 109 QTQQLLEMCKDVC-EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 167
Query: 545 SKVSDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY 583
S V PP +++I++FG+LM EI S GK+PY
Sbjct: 168 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 91 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 26/171 (15%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E + ++ + ++H+ V L G C P ++ EY NG + +L +EM H +
Sbjct: 47 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYL--REMRH-RF 101
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
+ + M C + M + + H +L++ + D KV++ L + +
Sbjct: 102 QTQQLLEMCKDVC-EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF-----GLSRYVL 155
Query: 548 SDDIENSV---LPPLADP-----------ETNIYSFGILMLEIIS-GKLPY 583
D+ +SV P P +++I++FG+LM EI S GK+PY
Sbjct: 156 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/287 (17%), Positives = 115/287 (40%), Gaps = 31/287 (10%)
Query: 379 ELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTL 438
E++ +C +I + G L + + T + + Q + + +
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 439 SRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTA 498
+ +H N ++L G +P M+V EY NG++ L K + ++ G +
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPV--MIVTEYMENGSLDTFLK-KNDGQFTVIQLVGMLRGIS 134
Query: 499 YCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP- 557
++Y+ + H +L++ I + + KV++ + + + + +P
Sbjct: 135 AGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 191
Query: 558 PLADPE----------TNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFS 606
PE ++++S+GI+M E++S G+ PY E + K + P
Sbjct: 192 RWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMD 251
Query: 607 CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
C P+ A+ +++ +C + + RP ++I+ L ++I
Sbjct: 252 C---PA----------ALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 102/238 (42%), Gaps = 41/238 (17%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR---------- 492
HKN +NL+G C D P ++ EYA G + E+L + ++++ +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 493 -IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSKV 547
++ T + M + + H +L++ + +T++ K+A+ I K+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 278 MDKPANCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLT 320
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 93 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 71 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 126
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 127 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 184 LTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 69 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 124
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 125 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 70 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 125
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 126 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 183 LTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 26/166 (15%)
Query: 433 KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR 492
++ + ++H+ V L G C P ++ EY NG + +L +EM H + +
Sbjct: 53 EEAKVMMNLSHEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYL--REMRH-RFQTQQL 107
Query: 493 IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIE 552
+ M C + M + + H +L++ + D KV++ L + + D+
Sbjct: 108 LEMCKDVC-EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF-----GLSRYVLDDEYT 161
Query: 553 NSV---LPPLADP-----------ETNIYSFGILMLEIIS-GKLPY 583
+SV P P +++I++FG+LM EI S GK+PY
Sbjct: 162 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 94 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 101/238 (42%), Gaps = 41/238 (17%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR---------- 492
HKN +NL+G C D P ++ EYA G + E+L + ++++ +
Sbjct: 92 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 493 -IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSKV 547
++ T + M + + H +L++ + +T++ K+A+ I K
Sbjct: 150 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 269
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 270 MDKPANCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLT 312
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 101/238 (42%), Gaps = 41/238 (17%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR---------- 492
HKN +NL+G C D P ++ EYA G + E+L + ++++ +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 493 -IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSKV 547
++ T + M + + H +L++ + +T++ K+A+ I K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 278 MDKPANCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLT 320
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 26/171 (15%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E + ++ + ++H+ V L G C P ++ EY NG + +L +EM H +
Sbjct: 43 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYL--REMRH-RF 97
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
+ + M C + M + + H +L++ + D KV++ L + +
Sbjct: 98 QTQQLLEMCKDVC-EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF-----GLSRYVL 151
Query: 548 SDDIENSV---LPPLADP-----------ETNIYSFGILMLEIIS-GKLPY 583
D+ +SV P P +++I++FG+LM EI S GK+PY
Sbjct: 152 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 68 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 123
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 124 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 181 LTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 93 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 93 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 93 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 96 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 151
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 152 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 209 LTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 94 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 91 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 432 RKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARM 491
R+++ L H + + L Y P + MV EY G +F++ I + LD
Sbjct: 64 RREIQNLKLFRHPHIIKL--YQVISTPSDIFMVMEYVSGGELFDY--ICKNGRLDEKESR 119
Query: 492 R----IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-- 545
R I+ G YC ++M V H +L + L AK+A+ + +
Sbjct: 120 RLFQQILSGVDYCHRHM-------VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 172
Query: 546 KVSDDIENSVLPPL------ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYL 599
+ S N P + A PE +I+S G+++ ++ G LP+ ++ ++ K D +
Sbjct: 173 RXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI 232
Query: 600 NEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645
+ ++PS+ S ++K ++ D +R T+ DI
Sbjct: 233 FYTPQY---LNPSVIS-----------LLKHMLQVDPMKRATIKDI 264
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 91 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 91 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 20/164 (12%)
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
++++++ + ++H N + L ED+ + +V E G +FE + K + AR
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNT--DIYLVMELCTGGELFERVVHKRVFRESDAAR 127
Query: 491 MR--IIMGTAYCLQYMHHELNPPVAHSNLS-SHCIYLTDDYAAKVAEICFTTIA------ 541
+ ++ AYC H+LN VAH +L + ++LTD + + I F A
Sbjct: 128 IMKDVLSAVAYC-----HKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 180
Query: 542 LPKSKVSDD--IENSVLPPLADPETNIYSFGILMLEIISGKLPY 583
+ ++KV + VL L PE + +S G++M ++ G P+
Sbjct: 181 MMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 20/164 (12%)
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
++++++ + ++H N + L ED+ + +V E G +FE + K + AR
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNT--DIYLVMELCTGGELFERVVHKRVFRESDAAR 110
Query: 491 MR--IIMGTAYCLQYMHHELNPPVAHSNLS-SHCIYLTDDYAAKVAEICFTTIA------ 541
+ ++ AYC H+LN VAH +L + ++LTD + + I F A
Sbjct: 111 IMKDVLSAVAYC-----HKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163
Query: 542 LPKSKVSDD--IENSVLPPLADPETNIYSFGILMLEIISGKLPY 583
+ ++KV + VL L PE + +S G++M ++ G P+
Sbjct: 164 MMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 75 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 130
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 131 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 188 LTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 98 FFVKLYFCFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 153
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 154 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 432 RKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFE----HLHIKEMDHLDW 487
++++ L H + + L Y P + MV EY G +F+ H ++EM+
Sbjct: 59 KREIQNLKLFRHPHIIKL--YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME---- 112
Query: 488 NAR---MRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544
AR +I+ YC ++M V H +L + L AK+A+ + +
Sbjct: 113 -ARRLFQQILSAVDYCHRHM-------VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164
Query: 545 SKVSDDIE--NSVLPPL------ADPETNIYSFGILMLEIISGKLPYCEE 586
+ D N P + A PE +I+S G+++ ++ G LP+ +E
Sbjct: 165 EFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 90 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 21/181 (11%)
Query: 415 TAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVF 474
AI + ++ S+E + ++ + + +++H V L G C + P +VFE+ +G +
Sbjct: 34 VAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLEQAPI--CLVFEFMEHGCLS 90
Query: 475 EHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAE 534
++L + + A + M C + M + V H +L++ + ++ KV++
Sbjct: 91 DYLRTQRGL---FAAETLLGMCLDVC-EGMAYLEEASVIHRDLAARNCLVGENQVIKVSD 146
Query: 535 ICFTTIALPKSKVSDDIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLP 582
T L S + P A PE ++++SFG+LM E+ S GK+P
Sbjct: 147 FGMTRFVLDDQYTSST--GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
Query: 583 Y 583
Y
Sbjct: 205 Y 205
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 101/238 (42%), Gaps = 41/238 (17%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR---------- 492
HKN +NL+G C D P ++ EYA G + E+L + ++++ +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 493 -IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSKV 547
++ T + M + + H +L++ + +T++ ++A+ I K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 278 MDKPANCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLT 320
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 392 DTQSGCTIYKGTLSSGV---EIAVA---ATAITSSKDWLKSQEMAY-RKQVDTLSRINHK 444
D + G + +G+ S+ V E+A + A I + +K ++ Y ++ D +SR++H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
FV L +DDE YA NG + + +I+++ D L+Y+
Sbjct: 90 FFVKLYFTFQDDEKL--YFGLSYAKNGELLK--YIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD-----DIENSVLPPL 559
H + H +L I L +D ++ + + P+SK + V P L
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 560 -----ADPETNIYSFGILMLEIISGKLPY 583
A +++++ G ++ ++++G P+
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 21/194 (10%)
Query: 402 GTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461
G + G + AI + ++ S+E + ++ + + +++H V L G C + P
Sbjct: 24 GLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLEQAPI-- 80
Query: 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHC 521
+VFE+ +G + ++L + + A + M C + M + V H +L++
Sbjct: 81 CLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVC-EGMAYLEEACVIHRDLAARN 136
Query: 522 IYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP-PLADPE----------TNIYSFG 570
+ ++ KV++ T L S + P A PE ++++SFG
Sbjct: 137 CLVGENQVIKVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSFSRYSSKSDVWSFG 194
Query: 571 ILMLEIIS-GKLPY 583
+LM E+ S GK+PY
Sbjct: 195 VLMWEVFSEGKIPY 208
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 21/178 (11%)
Query: 418 TSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL 477
T +D ++ +E + K+ + I H N V L+G C + PF +V EY P G + ++L
Sbjct: 64 TLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTLEPPF--YIVTEYMPYGNLLDYL 119
Query: 478 HIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535
+E + + A + + M T + ++Y+ + H +L++ + +++ KVA+
Sbjct: 120 --RECNREEVTAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADF 174
Query: 536 ---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPY 583
+T A K + S+ ++++++FG+L+ EI + G PY
Sbjct: 175 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 101/228 (44%), Gaps = 24/228 (10%)
Query: 368 FVTGVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQ 427
+ G P ++ E++ + + +Y+G + ++ T +D ++ +
Sbjct: 11 YFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKEDTMEVE 67
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E + K+ + I H N V L+G C + PF ++ E+ G + ++L +E + +
Sbjct: 68 E--FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYL--RECNRQEV 121
Query: 488 NARMRIIMGT--AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI---------C 536
NA + + M T + ++Y+ + H +L++ + +++ KVA+
Sbjct: 122 NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 178
Query: 537 FTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPY 583
+T A K + S+ ++++++FG+L+ EI + G PY
Sbjct: 179 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 103/247 (41%), Gaps = 41/247 (16%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR---------- 492
HKN +NL+G C D P ++ EYA G + E+L + ++ + +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 493 -IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSKV 547
++ T + M + + H +L++ + +T++ K+A+ I K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 278 MDKPANCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
Query: 659 QAVPRLS 665
+ LS
Sbjct: 323 EEYLDLS 329
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 21/181 (11%)
Query: 415 TAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVF 474
AI + ++ S+E + ++ + + +++H V L G C + P +VFE+ +G +
Sbjct: 34 VAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLEQAPI--CLVFEFMEHGCLS 90
Query: 475 EHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAE 534
++L + + A + M C + M + V H +L++ + ++ KV++
Sbjct: 91 DYLRTQRGL---FAAETLLGMCLDVC-EGMAYLEEACVIHRDLAARNCLVGENQVIKVSD 146
Query: 535 ICFTTIALPKSKVSDDIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLP 582
T L S + P A PE ++++SFG+LM E+ S GK+P
Sbjct: 147 FGMTRFVLDDQYTSST--GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
Query: 583 Y 583
Y
Sbjct: 205 Y 205
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 85/226 (37%), Gaps = 24/226 (10%)
Query: 385 EDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQ--EMAYRKQVDTLSRIN 442
E +N I G T G + E D K Q E+ + +V + +
Sbjct: 45 EYLANFIKIGEGST---GIVCIATEKHTGKQVAVKKMDLRKQQRRELLF-NEVVIMRDYH 100
Query: 443 HKNFVNLIG-YCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCL 501
H N V++ Y DE + M E + H + E + + L
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQIATVCLSVLRAL 154
Query: 502 QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF---TTIALPKSKVSDDIENSVLPP 558
Y+H N V H ++ S I LT D K+++ F + +PK K + P
Sbjct: 155 SYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPE 211
Query: 559 LAD-----PETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYL 599
+ E +I+S GI+++E+I G+ PY E L + D L
Sbjct: 212 VISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSL 257
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 119/281 (42%), Gaps = 61/281 (21%)
Query: 405 SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464
+ G VA A+ + D +++++D L + H++ + G CED + +V
Sbjct: 39 NDGTGEMVAVKALKA--DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLV 96
Query: 465 FEYAPNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCI 522
EY P G++ ++L H + L A+ +I G AY L H+ H NL++ +
Sbjct: 97 MEYVPLGSLRDYLPRHSIGLAQLLLFAQ-QICEGMAY-LHAQHY------IHRNLAARNV 148
Query: 523 YLTDDYAAKVAEICFTTIALPKS----KVSDDIENSVLPPLADPE----------TNIYS 568
L +D K+ + A+P+ +V +D ++ V PE ++++S
Sbjct: 149 LLDNDRLVKIGDFGLAK-AVPEGHEYYRVREDGDSPVF--WYAPECLKEYKFYYASDVWS 205
Query: 569 FGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMI---DPSLKSFKQNEL---- 621
FG+ + E+++ +C+ + + P F +I + + EL
Sbjct: 206 FGVTLYELLT----HCDSSQ-----------SPPTKFLELIGIAQGQMTVLRLTELLERG 250
Query: 622 -------EAICEV---IKECIKTDLRQRPTMNDIIVQLRQV 652
+ CEV +K C +T+ RPT ++I L+ V
Sbjct: 251 ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 21/194 (10%)
Query: 402 GTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461
G + G + AI + ++ S+E + ++ + + +++H V L G C + P
Sbjct: 19 GLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLEQAPI-- 75
Query: 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHC 521
+VFE+ +G + ++L + + A + M C + M + V H +L++
Sbjct: 76 CLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVC-EGMAYLEEACVIHRDLAARN 131
Query: 522 IYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP-PLADPE----------TNIYSFG 570
+ ++ KV++ T L S + P A PE ++++SFG
Sbjct: 132 CLVGENQVIKVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSFSRYSSKSDVWSFG 189
Query: 571 ILMLEIIS-GKLPY 583
+LM E+ S GK+PY
Sbjct: 190 VLMWEVFSEGKIPY 203
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 119/281 (42%), Gaps = 61/281 (21%)
Query: 405 SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464
+ G VA A+ + D +++++D L + H++ + G CED + +V
Sbjct: 39 NDGTGEMVAVKALKA--DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLV 96
Query: 465 FEYAPNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCI 522
EY P G++ ++L H + L A+ +I G AY L H+ H NL++ +
Sbjct: 97 MEYVPLGSLRDYLPRHSIGLAQLLLFAQ-QICEGMAY-LHSQHY------IHRNLAARNV 148
Query: 523 YLTDDYAAKVAEICFTTIALPKS----KVSDDIENSVLPPLADPE----------TNIYS 568
L +D K+ + A+P+ +V +D ++ V PE ++++S
Sbjct: 149 LLDNDRLVKIGDFGLAK-AVPEGHEYYRVREDGDSPVF--WYAPECLKEYKFYYASDVWS 205
Query: 569 FGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMI---DPSLKSFKQNEL---- 621
FG+ + E+++ +C+ + + P F +I + + EL
Sbjct: 206 FGVTLYELLT----HCDSSQ-----------SPPTKFLELIGIAQGQMTVLRLTELLERG 250
Query: 622 -------EAICEV---IKECIKTDLRQRPTMNDIIVQLRQV 652
+ CEV +K C +T+ RPT ++I L+ V
Sbjct: 251 ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 42/195 (21%)
Query: 432 RKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFE----HLHIKEMDHLDW 487
++++ L H + + L Y P + MV EY G +F+ H ++EM+
Sbjct: 59 KREIQNLKLFRHPHIIKL--YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME---- 112
Query: 488 NAR---MRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA----------- 533
AR +I+ YC ++M V H +L + L AK+A
Sbjct: 113 -ARRLFQQILSAVDYCHRHM-------VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164
Query: 534 EICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEK 593
E T+ P + I + A PE +I+S G+++ ++ G LP+ +E ++ K
Sbjct: 165 EFLRTSCGSPNYAAPEVISGRLY---AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFK 221
Query: 594 -------WAADYLNE 601
+ +YLN
Sbjct: 222 KIRGGVFYIPEYLNR 236
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 89
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + NA + + M T + ++Y+ + H +L
Sbjct: 90 --YIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL 142
Query: 518 SSHCIYLTDDYAAKVAEI---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ +T A K + S+ ++++++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 203 FGVLLWEIATYGMSPY 218
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 101/239 (42%), Gaps = 41/239 (17%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR--------- 492
HKN ++L+G C D P ++ EYA G + E+L + ++++ +
Sbjct: 99 KHKNIIHLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 493 --IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSK 546
++ T + M + + H +L++ + +T++ K+A+ I K
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 547 VSDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAAD 597
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH 276
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 277 RMDKPANCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLT 320
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 100/239 (41%), Gaps = 41/239 (17%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR--------- 492
HKN + L+G C D P ++ EYA G + E+L + ++++ +
Sbjct: 99 KHKNIITLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 493 --IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSK 546
++ T + M + + H +L++ + +T++ K+A+ I K
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 547 VSDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAAD 597
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH 276
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 277 RMDKPANCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLT 320
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 100/238 (42%), Gaps = 41/238 (17%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR---------- 492
HKN +NL+G C D P ++ YA G + E+L + ++++ +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 493 -IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSKV 547
++ T + M + + H +L++ + +T++ K+A+ I K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 278 MDKPANCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLT 320
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 366 KAFVTGV-PKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWL 424
K + GV P ++ E++ + + +Y+G + ++ T +D +
Sbjct: 202 KPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKEDTM 258
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH 484
+ +E + K+ + I H N V L+G C + PF ++ E+ G + ++L +E +
Sbjct: 259 EVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYL--RECNR 312
Query: 485 LDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI------- 535
+ +A + + M T + ++Y+ + H NL++ + +++ KVA+
Sbjct: 313 QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369
Query: 536 --CFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPY 583
+T A K + S+ ++++++FG+L+ EI + G PY
Sbjct: 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 21/194 (10%)
Query: 402 GTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461
G + G + AI + K+ S++ + ++ + + +++H V L G C + P
Sbjct: 41 GLVHLGYWLNKDKVAIKTIKEGSMSED-DFIEEAEVMMKLSHPKLVQLYGVCLEQAPI-- 97
Query: 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHC 521
+VFE+ +G + ++L + + A + M C + M + V H +L++
Sbjct: 98 CLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVC-EGMAYLEEACVIHRDLAARN 153
Query: 522 IYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP-PLADPE----------TNIYSFG 570
+ ++ KV++ T L S + P A PE ++++SFG
Sbjct: 154 CLVGENQVIKVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSFSRYSSKSDVWSFG 211
Query: 571 ILMLEIIS-GKLPY 583
+LM E+ S GK+PY
Sbjct: 212 VLMWEVFSEGKIPY 225
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 100/238 (42%), Gaps = 41/238 (17%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR---------- 492
HKN +NL+G C D P ++ YA G + E+L + ++++ +
Sbjct: 100 HKNIINLLGACTQDGPL--YVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 493 -IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSKV 547
++ T + M + + H +L++ + +T++ K+A+ I K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 278 MDKPANCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLT 320
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 44/219 (20%)
Query: 399 IYKGTL---SSGVEIAVAATAITSSKDWLKSQ-EMAYRKQVDTLSRINHKNFVNLIGYCE 454
+YKG L + G + A AI + KD + +R + +R+ H N V L+G
Sbjct: 42 VYKGHLFGPAPGEQ--TQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 99
Query: 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR---------------MRIIMGTAY 499
D+P + M+F Y +G + E L + H D + + ++ A
Sbjct: 100 KDQPLS--MIFSYCSHGDLHEFL-VMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA 156
Query: 500 CLQYM--HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP 557
++Y+ HH V H +L++ + + D K++++ + + + NS+LP
Sbjct: 157 GMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFR-EVYAADYYKLLGNSLLP 210
Query: 558 -----PLA------DPETNIYSFGILMLEIIS-GKLPYC 584
P A +++I+S+G+++ E+ S G PYC
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 249
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 84/214 (39%), Gaps = 34/214 (15%)
Query: 392 DTQSGCTIYKGTLSSGVEIAVAATA-ITSSKDWLKSQEMAYR---KQVDTLSRINHKNFV 447
D G + KG +++ T + K+ ++ E R K+V + + H N +
Sbjct: 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVL 70
Query: 448 NLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMD-HLDWNARMRIIMGTAYCLQYMHH 506
IG D+ N + EY GT+ IK MD W+ R+ A + Y+H
Sbjct: 71 KFIGVLYKDKRLN--FITEYIKGGTL--RGIIKSMDSQYPWSQRVSFAKDIASGMAYLH- 125
Query: 507 ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA------ 560
+N + H +L+SH + ++ VA+ + + + + + + P
Sbjct: 126 SMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 561 ----------------DPETNIYSFGILMLEIIS 578
D + +++SFGI++ EII
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 85
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + NA + + M T + ++Y+ + H +L
Sbjct: 86 --YIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL 138
Query: 518 SSHCIYLTDDYAAKVAEI---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ +T A K + S+ ++++++
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 199 FGVLLWEIATYGMSPY 214
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 44/219 (20%)
Query: 399 IYKGTL---SSGVEIAVAATAITSSKDWLKSQ-EMAYRKQVDTLSRINHKNFVNLIGYCE 454
+YKG L + G + A AI + KD + +R + +R+ H N V L+G
Sbjct: 25 VYKGHLFGPAPGEQ--TQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 82
Query: 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR---------------MRIIMGTAY 499
D+P + M+F Y +G + E L + H D + + ++ A
Sbjct: 83 KDQPLS--MIFSYCSHGDLHEFL-VMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA 139
Query: 500 CLQYM--HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP 557
++Y+ HH V H +L++ + + D K++++ + + + NS+LP
Sbjct: 140 GMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFR-EVYAADYYKLLGNSLLP 193
Query: 558 -----PLA------DPETNIYSFGILMLEIIS-GKLPYC 584
P A +++I+S+G+++ E+ S G PYC
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 232
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 433 KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR 492
++V+ L +++H N + L ED F +V E G +F+ + IK + +A R
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSF--YIVGELYTGGELFDEI-IKRKRFSEHDA-AR 125
Query: 493 IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIALPKSKVSD 549
II + YMH + H +L I L D K+ + +T +K+ D
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 550 DIENS------VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEK 593
I + VL D + +++S G+++ ++SG P+ + E I K
Sbjct: 183 RIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 89
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + NA + + M T + ++Y+ + H +L
Sbjct: 90 --YIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL 142
Query: 518 SSHCIYLTDDYAAKVAEI---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ +T A K + S+ ++++++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 203 FGVLLWEIATYGMSPY 218
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 122/271 (45%), Gaps = 41/271 (15%)
Query: 405 SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464
+ G VA A+ + D +++++D L + H++ + G CED + +V
Sbjct: 56 NDGTGEMVAVKALKA--DAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113
Query: 465 FEYAPNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCI 522
EY P G++ ++L H + L A+ +I G AY L H+ H +L++ +
Sbjct: 114 MEYVPLGSLRDYLPRHSIGLAQLLLFAQ-QICEGMAY-LHAQHY------IHRDLAARNV 165
Query: 523 YLTDDYAAKVAEICFTTIALPKS----KVSDDIENSVLPPLADPE----------TNIYS 568
L +D K+ + A+P+ +V +D ++ V PE ++++S
Sbjct: 166 LLDNDRLVKIGDFGLAK-AVPEGHEXYRVREDGDSPVF--WYAPECLKEYKFYYASDVWS 222
Query: 569 FGILMLEIISGKLPYCEE------KELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622
FG+ + E+++ +C+ K L + A + R + +++ + + ++
Sbjct: 223 FGVTLYELLT----HCDSSQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDKCP 277
Query: 623 A-ICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
A + ++K C +T+ RPT ++I L+ V
Sbjct: 278 AEVYHLMKNCWETEASFRPTFENLIPILKTV 308
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 433 KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR 492
++V+ L +++H N + L ED F +V E G +F+ + IK + +A R
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSF--YIVGELYTGGELFDEI-IKRKRFSEHDA-AR 125
Query: 493 IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT---DDYAAKVAEICFTTIALPKSKVSD 549
II + YMH + H +L I L D K+ + +T +K+ D
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 550 DIENS------VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEK 593
I + VL D + +++S G+++ ++SG P+ + E I K
Sbjct: 183 RIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 433 KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR 492
++V+ L +++H N + L ED F +V E G +F+ + IK + +A R
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSF--YIVGELYTGGELFDEI-IKRKRFSEHDA-AR 125
Query: 493 IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT---DDYAAKVAEICFTTIALPKSKVSD 549
II + YMH + H +L I L D K+ + +T +K+ D
Sbjct: 126 IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 550 DIENS------VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEK 593
I + VL D + +++S G+++ ++SG P+ + E I K
Sbjct: 183 RIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 371 GVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMA 430
G P ++ E++ + + +Y+G + ++ T +D ++ +E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKEDTMEVEE-- 55
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
+ K+ + I H N V L+G C + PF ++ E+ G + ++L +E + + +A
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYL--RECNRQEVSAV 111
Query: 491 MRIIMGT--AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI---------CFTT 539
+ + M T + ++Y+ + H +L++ + +++ KVA+ +T
Sbjct: 112 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 540 IALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPY 583
A K + S+ ++++++FG+L+ EI + G PY
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 86
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + NA + + M T + ++Y+ + H +L
Sbjct: 87 --YIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL 139
Query: 518 SSHCIYLTDDYAAKVAEI---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ +T A K + S+ ++++++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 200 FGVLLWEIATYGMSPY 215
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 84
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + NA + + M T + ++Y+ + H +L
Sbjct: 85 --YIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL 137
Query: 518 SSHCIYLTDDYAAKVAEI---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ +T A K + S+ ++++++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 198 FGVLLWEIATYGMSPY 213
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH 484
+S + RK++ T+S + H VNL EDD +M++E+ G +FE + E +
Sbjct: 195 ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM--VMIYEFMSGGELFEKV-ADEHNK 251
Query: 485 LDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL-- 542
+ + + + L +M HE N H +L I T + ++ I F A
Sbjct: 252 MSEDEAVEYMRQVCKGLCHM-HENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308
Query: 543 PKS--KVSDDIENSVLPPLADPE-----TNIYSFGILMLEIISGKLPYCEEKE 588
PK KV+ P +A+ + T+++S G+L ++SG P+ E +
Sbjct: 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 361
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 371 GVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMA 430
G P ++ E++ + + +Y+G + ++ T +D ++ +E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKEDTMEVEE-- 55
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
+ K+ + I H N V L+G C + PF ++ E+ G + ++L +E + + +A
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYL--RECNRQEVSAV 111
Query: 491 MRIIMGT--AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI---------CFTT 539
+ + M T + ++Y+ + H +L++ + +++ KVA+ +T
Sbjct: 112 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 540 IALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPY 583
A K + S+ ++++++FG+L+ EI + G PY
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 89
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + NA + + M T + ++Y+ + H +L
Sbjct: 90 --YIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL 142
Query: 518 SSHCIYLTDDYAAKVAEI---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ +T A K + S+ ++++++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 203 FGVLLWEIATYGMSPY 218
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 31 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 88
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + NA + + M T + ++Y+ + H +L
Sbjct: 89 --YIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL 141
Query: 518 SSHCIYLTDDYAAKVAEI---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ +T A K + S+ ++++++
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 201
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 202 FGVLLWEIATYGMSPY 217
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 86
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + NA + + M T + ++Y+ + H +L
Sbjct: 87 --YIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL 139
Query: 518 SSHCIYLTDDYAAKVAEI---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ +T A K + S+ ++++++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 200 FGVLLWEIATYGMSPY 215
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 86
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + NA + + M T + ++Y+ + H +L
Sbjct: 87 --YIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL 139
Query: 518 SSHCIYLTDDYAAKVAEI---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ +T A K + S+ ++++++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 200 FGVLLWEIATYGMSPY 215
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 84
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + NA + + M T + ++Y+ + H +L
Sbjct: 85 --YIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL 137
Query: 518 SSHCIYLTDDYAAKVAEI---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ +T A K + S+ ++++++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 198 FGVLLWEIATYGMSPY 213
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 108/272 (39%), Gaps = 40/272 (14%)
Query: 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSS--KDWLKSQEMAYRKQVDTLSRINHK 444
F I SG +++G E+A+ + K+ + ++ + R+ +
Sbjct: 26 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-------KNP 78
Query: 445 NFVN-LIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY 503
N VN L Y DE + +V EY G++ + + MD A R CLQ
Sbjct: 79 NIVNYLDSYLVGDELW---VVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQA 129
Query: 504 MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENS--------V 555
+ + V H N+ S I L D + K+ + F P+ + + V
Sbjct: 130 LEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 189
Query: 556 LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615
P+ +I+S GI+ +E+I G+ PY E L A YL + +P
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-----ALYLIATNGTPELQNPE--- 241
Query: 616 FKQNELEAIC-EVIKECIKTDLRQRPTMNDII 646
+L AI + + C++ D+ +R + ++I
Sbjct: 242 ----KLSAIFRDFLNRCLEMDVEKRGSAKELI 269
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 82
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + +A + + M T + ++Y+ + H +L
Sbjct: 83 --YIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDL 135
Query: 518 SSHCIYLTDDYAAKVAEI---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ FT A K + S+ ++++++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 196 FGVLLWEIATYGMSPY 211
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+YKG+L +AV + + ++++ K + + + H N I E
Sbjct: 28 AVYKGSLDER-PVAVKVFSFANRQNFINE------KNIYRVPLMEHDNIARFIVGDERVT 80
Query: 458 PFNRM---MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL------ 508
RM +V EY PNG++ ++L + DW + R+ L Y+H EL
Sbjct: 81 ADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLAYLHTELPRGDHY 137
Query: 509 NPPVAHSNLSSHCIYLTDD 527
P ++H +L+S + + +D
Sbjct: 138 KPAISHRDLNSRNVLVKND 156
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 85
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + NA + + M T + ++Y+ + H +L
Sbjct: 86 --YIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL 138
Query: 518 SSHCIYLTDDYAAKVAEICFTTI---------ALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ + + A K + S+ ++++++
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 199 FGVLLWEIATYGMSPY 214
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH 484
+S + RK++ T+S + H VNL EDD +M++E+ G +FE + E +
Sbjct: 89 ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM--VMIYEFMSGGELFEKV-ADEHNK 145
Query: 485 LDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL-- 542
+ + + + L +M HE N H +L I T + ++ I F A
Sbjct: 146 MSEDEAVEYMRQVCKGLCHM-HENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 202
Query: 543 PKS--KVSDDIENSVLPPLADPE-----TNIYSFGILMLEIISGKLPYCEEKE 588
PK KV+ P +A+ + T+++S G+L ++SG P+ E +
Sbjct: 203 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 255
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 405 SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464
++G ++AV + S + + +K+++ L + H+N V G C +D ++
Sbjct: 48 NTGEQVAVKSLKPESGGNHIAD----LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 103
Query: 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524
E+ P+G++ E+L K + ++ +++ + + Y+ H +L++ + +
Sbjct: 104 MEFLPSGSLKEYLP-KNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLV 159
Query: 525 TDDYAAKVAEICFTTIALPKSK----VSDDIENSVLPPLADPE----------TNIYSFG 570
++ K+ + T A+ K V DD ++ V PE ++++SFG
Sbjct: 160 ESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVF--WYAPECLMQSKFYIASDVWSFG 216
Query: 571 ILMLEIISGKLPYCE 585
+ + E+++ YC+
Sbjct: 217 VTLHELLT----YCD 227
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 90/195 (46%), Gaps = 29/195 (14%)
Query: 405 SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464
++G ++AV + S + + +K+++ L + H+N V G C +D ++
Sbjct: 36 NTGEQVAVKSLKPESGGNHIAD----LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 91
Query: 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524
E+ P+G++ E+L K + ++ +++ + + Y+ + H +L++ + +
Sbjct: 92 MEFLPSGSLKEYLP-KNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLV 147
Query: 525 TDDYAAKVAEICFTTIALPKSK----VSDDIENSVLPPLADPE----------TNIYSFG 570
++ K+ + T A+ K V DD ++ V PE ++++SFG
Sbjct: 148 ESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVF--WYAPECLMQSKFYIASDVWSFG 204
Query: 571 ILMLEIISGKLPYCE 585
+ + E+++ YC+
Sbjct: 205 VTLHELLT----YCD 215
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 371 GVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMA 430
G P ++ E++ + + +Y+G + ++ T +D ++ +E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKEDTMEVEE-- 55
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
+ K+ + I H N V L+G C + PF ++ E+ G + ++L +E + + +A
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYL--RECNRQEVSAV 111
Query: 491 MRIIMGT--AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI---------CFTT 539
+ + M T + ++Y+ + H +L++ + +++ KVA+ +T
Sbjct: 112 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 540 IALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPY 583
A K + S+ ++++++FG+L+ EI + G PY
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 371 GVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMA 430
G P ++ E++ + + +Y+G + ++ T +D ++ +E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKEDTMEVEE-- 55
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
+ K+ + I H N V L+G C + PF ++ E+ G + ++L +E + + +A
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYL--RECNRQEVSAV 111
Query: 491 MRIIMGT--AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI---------CFTT 539
+ + M T + ++Y+ + H +L++ + +++ KVA+ +T
Sbjct: 112 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Query: 540 IALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPY 583
A K + S+ ++++++FG+L+ EI + G PY
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 81/170 (47%), Gaps = 27/170 (15%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL--HIKEMDHLDW 487
++++++ L + H++ V G CED + +V EY P G++ ++L H + L
Sbjct: 57 GWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL 116
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-- 545
A+ +I G AY L H+ H L++ + L +D K+ + A+P+
Sbjct: 117 FAQ-QICEGMAY-LHAQHY------IHRALAARNVLLDNDRLVKIGDFGLAK-AVPEGHE 167
Query: 546 --KVSDDIENSVL--PPLADPE------TNIYSFGILMLEIISGKLPYCE 585
+V +D ++ V P E ++++SFG+ + E+++ YC+
Sbjct: 168 YYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT----YCD 213
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 81/170 (47%), Gaps = 27/170 (15%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL--HIKEMDHLDW 487
++++++ L + H++ V G CED + +V EY P G++ ++L H + L
Sbjct: 56 GWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL 115
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-- 545
A+ +I G AY L H+ H L++ + L +D K+ + A+P+
Sbjct: 116 FAQ-QICEGMAY-LHAQHY------IHRALAARNVLLDNDRLVKIGDFGLAK-AVPEGHE 166
Query: 546 --KVSDDIENSVL--PPLADPE------TNIYSFGILMLEIISGKLPYCE 585
+V +D ++ V P E ++++SFG+ + E+++ YC+
Sbjct: 167 YYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT----YCD 212
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 27/214 (12%)
Query: 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSS--KDWLKSQEMAYRKQVDTLSRINHK 444
F I SG +++G E+A+ + K+ + ++ + R+ +
Sbjct: 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-------KNP 77
Query: 445 NFVN-LIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY 503
N VN L Y DE + +V EY G++ + + MD A R CLQ
Sbjct: 78 NIVNYLDSYLVGDELW---VVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQA 128
Query: 504 MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENS--------V 555
+ + V H ++ S I L D + K+ + F P+ ++ + V
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV 188
Query: 556 LPPLADPETNIYSFGILMLEIISGKLPYCEEKEL 589
P+ +I+S GI+ +E+I G+ PY E L
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 44/217 (20%)
Query: 402 GTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFN 460
G +GV I VA + D S+ A ++ ++++ +H+N VNL+G C P
Sbjct: 68 GISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI- 124
Query: 461 RMMVFEYAPNGTVFEHLHIKE----MDHLDWNARMR---------IIMGTAYCLQY---- 503
++FEY G + +L K D +++ + R + C Y
Sbjct: 125 -YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK 183
Query: 504 -MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDD------------ 550
M H +L++ + +T KV +IC L + +SD
Sbjct: 184 GMEFLEFKSCVHRDLAARNVLVTH---GKVVKIC--DFGLARDIMSDSNYVVRGNARLPV 238
Query: 551 ---IENSVLPPLADPETNIYSFGILMLEIIS-GKLPY 583
S+ + +++++S+GIL+ EI S G PY
Sbjct: 239 KWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 89
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + NA + + M T + ++Y+ + H +L
Sbjct: 90 --YIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL 142
Query: 518 SSHCIYLTDDYAAKVAEICFTTI---------ALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ + + A K + S+ ++++++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 203 FGVLLWEIATYGMSPY 218
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 433 KQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARM 491
++V+TL + +KN + LI + EDD F +VFE G++ HI++ H +
Sbjct: 59 REVETLYQCQGNKNILELIEFFEDDTRF--YLVFEKLQGGSIL--AHIQKQKHFNEREAS 114
Query: 492 RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536
R++ A L ++H +AH +L I +IC
Sbjct: 115 RVVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKIC 156
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 402 GTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461
G + G + AI + ++ S+E + ++ + + +++H V L G C + P
Sbjct: 22 GLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLEQAPI-- 78
Query: 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHC 521
+V E+ +G + ++L + + A + M C + M + V H +L++
Sbjct: 79 CLVTEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVC-EGMAYLEEACVIHRDLAARN 134
Query: 522 IYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP-PLADPE----------TNIYSFG 570
+ ++ KV++ T L S + P A PE ++++SFG
Sbjct: 135 CLVGENQVIKVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSFSRYSSKSDVWSFG 192
Query: 571 ILMLEIIS-GKLPY 583
+LM E+ S GK+PY
Sbjct: 193 VLMWEVFSEGKIPY 206
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 89
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + +A + + M T + ++Y+ + H +L
Sbjct: 90 --YIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDL 142
Query: 518 SSHCIYLTDDYAAKVAEI---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ +T A K + S+ ++++++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 203 FGVLLWEIATYGMSPY 218
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 108/272 (39%), Gaps = 40/272 (14%)
Query: 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSS--KDWLKSQEMAYRKQVDTLSRINHK 444
F I SG +++G E+A+ + K+ + ++ + R+ +
Sbjct: 26 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-------KNP 78
Query: 445 NFVN-LIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY 503
N VN L Y DE + +V EY G++ + + MD A R CLQ
Sbjct: 79 NIVNYLDSYLVGDELW---VVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQA 129
Query: 504 MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENS--------V 555
+ + V H ++ S I L D + K+ + F P+ + + V
Sbjct: 130 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 189
Query: 556 LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615
P+ +I+S GI+ +E+I G+ PY E L A YL + +P
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-----ALYLIATNGTPELQNPE--- 241
Query: 616 FKQNELEAIC-EVIKECIKTDLRQRPTMNDII 646
+L AI + + C++ D+ +R + ++I
Sbjct: 242 ----KLSAIFRDFLNRCLEMDVEKRGSAKELI 269
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 105/253 (41%), Gaps = 51/253 (20%)
Query: 434 QVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLH--------------- 478
+ + L ++NH + + L G C D P +++ EYA G++ L
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 479 --IKEMDHLDWNA-RMRIIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAE 534
+DH D A M ++ A+ + Q M + + H +L++ I + + K+++
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 535 ICFTTIA------LPKSKVSDDIENSVLPPLAD----PETNIYSFGILMLEIIS-GKLPY 583
+ + +S+ ++ + L D +++++SFG+L+ EI++ G PY
Sbjct: 194 FGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
Query: 584 ---CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRP 640
E+ ++ K + P N S E + ++ +C K + +RP
Sbjct: 254 PGIPPERLFNLLK-TGHRMERPDNCS---------------EEMYRLMLQCWKQEPDKRP 297
Query: 641 TMNDIIVQLRQVI 653
DI L +++
Sbjct: 298 VFADISKDLEKMM 310
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 26/223 (11%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH----- 484
A+ ++ + + + H V L +EP ++ E+ G++ + L E
Sbjct: 53 AFLEEANLMKTLQHDKLVRLYAVVTKEEPI--YIITEFMAKGSLLDFLKSDEGGKVLLPK 110
Query: 485 -LDWNARMRIIMGTAYCLQ--YMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541
+D++A+ I G AY + Y+H +L + S C A + + +T
Sbjct: 111 LIDFSAQ--IAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 168
Query: 542 LPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLN 600
K + ++ ++N++SFGIL+ EI++ GK+PY + +
Sbjct: 169 GAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYR 228
Query: 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMN 643
PR +C + + +++K C K +RPT +
Sbjct: 229 MPRMENCP-------------DELYDIMKMCWKEKAEERPTFD 258
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 105/253 (41%), Gaps = 51/253 (20%)
Query: 434 QVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLH--------------- 478
+ + L ++NH + + L G C D P +++ EYA G++ L
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 479 --IKEMDHLDWNA-RMRIIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAE 534
+DH D A M ++ A+ + Q M + + H +L++ I + + K+++
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISD 193
Query: 535 ICFTTIA------LPKSKVSDDIENSVLPPLAD----PETNIYSFGILMLEIIS-GKLPY 583
+ + +S+ ++ + L D +++++SFG+L+ EI++ G PY
Sbjct: 194 FGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
Query: 584 ---CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRP 640
E+ ++ K + P N S E + ++ +C K + +RP
Sbjct: 254 PGIPPERLFNLLK-TGHRMERPDNCS---------------EEMYRLMLQCWKQEPDKRP 297
Query: 641 TMNDIIVQLRQVI 653
DI L +++
Sbjct: 298 VFADISKDLEKMM 310
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 105/253 (41%), Gaps = 51/253 (20%)
Query: 434 QVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLH--------------- 478
+ + L ++NH + + L G C D P +++ EYA G++ L
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 479 --IKEMDHLDWNA-RMRIIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAE 534
+DH D A M ++ A+ + Q M + + H +L++ I + + K+++
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 535 ICFTTIA------LPKSKVSDDIENSVLPPLAD----PETNIYSFGILMLEIIS-GKLPY 583
+ + +S+ ++ + L D +++++SFG+L+ EI++ G PY
Sbjct: 194 FGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
Query: 584 ---CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRP 640
E+ ++ K + P N S E + ++ +C K + +RP
Sbjct: 254 PGIPPERLFNLLK-TGHRMERPDNCS---------------EEMYRLMLQCWKQEPDKRP 297
Query: 641 TMNDIIVQLRQVI 653
DI L +++
Sbjct: 298 VFADISKDLEKMM 310
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 85/214 (39%), Gaps = 27/214 (12%)
Query: 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSS--KDWLKSQEMAYRKQVDTLSRINHK 444
F I SG +++G E+A+ + K+ + ++ + R+ +
Sbjct: 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-------KNP 77
Query: 445 NFVN-LIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY 503
N VN L Y DE + +V EY G++ + + MD A R CLQ
Sbjct: 78 NIVNYLDSYLVGDELW---VVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQA 128
Query: 504 MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENS--------V 555
+ + V H ++ S I L D + K+ + F P+ + + V
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 556 LPPLADPETNIYSFGILMLEIISGKLPYCEEKEL 589
P+ +I+S GI+ +E+I G+ PY E L
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 85/214 (39%), Gaps = 27/214 (12%)
Query: 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSS--KDWLKSQEMAYRKQVDTLSRINHK 444
F I SG +++G E+A+ + K+ + ++ + R+ +
Sbjct: 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-------KNP 77
Query: 445 NFVN-LIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY 503
N VN L Y DE + +V EY G++ + + MD A R CLQ
Sbjct: 78 NIVNYLDSYLVGDELW---VVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQA 128
Query: 504 MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENS--------V 555
+ + V H ++ S I L D + K+ + F P+ + + V
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 188
Query: 556 LPPLADPETNIYSFGILMLEIISGKLPYCEEKEL 589
P+ +I+S GI+ +E+I G+ PY E L
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 82
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + +A + + M T + ++Y+ + H +L
Sbjct: 83 --YIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDL 135
Query: 518 SSHCIYLTDDYAAKVAEICFTTI---------ALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ + + A K + S+ ++++++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 196 FGVLLWEIATYGMSPY 211
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 99/246 (40%), Gaps = 48/246 (19%)
Query: 438 LSRINHKNFVNLIGYCEDDEPFN---RMMVFEYAPNGTVFEHLHIKEMD----HLDWNAR 490
+ +H N + L+G C + M++ + G + +L ++ H+
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL 149
Query: 491 MRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDD 550
++ ++ A ++Y+ N H +L++ L DD +C L K S D
Sbjct: 150 LKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMT-----VCVADFGLSKKIYSGD 201
Query: 551 -----------IENSVLPPLAD----PETNIYSFGILMLEIIS-GKLPY--CEEKELSIE 592
++ + LAD ++++++FG+ M EI + G PY + E+
Sbjct: 202 YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDY 261
Query: 593 KWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
L +P + C L+ + E++ C +TD RPT + + +QL ++
Sbjct: 262 LLHGHRLKQPED--C-------------LDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
Query: 653 INISPE 658
+ P+
Sbjct: 307 LESLPD 312
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 402 GTLSSGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
G + GV + ++ T +D ++ +E + K+ + I H N V L+G C + PF
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTREPPF 82
Query: 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNL 517
++ E+ G + ++L +E + + +A + + M T + ++Y+ + H +L
Sbjct: 83 --YIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDL 135
Query: 518 SSHCIYLTDDYAAKVAEICFTTI---------ALPKSKVSDDIENSVLPPLADPETNIYS 568
++ + +++ KVA+ + + A K + S+ ++++++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 569 FGILMLEIIS-GKLPY 583
FG+L+ EI + G PY
Sbjct: 196 FGVLLWEIATYGMSPY 211
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 26/223 (11%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH----- 484
A+ ++ + + + H V L +EP ++ EY G++ + L E
Sbjct: 54 AFLEEANLMKTLQHDKLVRLYAVVTREEPI--YIITEYMAKGSLLDFLKSDEGGKVLLPK 111
Query: 485 -LDWNARMRIIMGTAYCLQ--YMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541
+D++A+ I G AY + Y+H +L + S C A + + +T
Sbjct: 112 LIDFSAQ--IAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 169
Query: 542 LPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLN 600
K + ++ +++++SFGIL+ EI++ GK+PY + +
Sbjct: 170 GAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYR 229
Query: 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMN 643
PR +C + + +++K C K +RPT +
Sbjct: 230 MPRVENCP-------------DELYDIMKMCWKEKAEERPTFD 259
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 18/167 (10%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E + ++ T+ +++H V G C + P +V EY NG + +L L+
Sbjct: 47 EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPI--YIVTEYISNGCLLNYLR-SHGKGLEP 103
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
+ + + + ++ + H +L++ + D KV++ T L V
Sbjct: 104 SQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160
Query: 548 SDDIENSVLPPLADPE----------TNIYSFGILMLEIIS-GKLPY 583
S + + PE +++++FGILM E+ S GK+PY
Sbjct: 161 S-SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 34/248 (13%)
Query: 406 SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465
+G E AV + K K+ + + ++V L +++H N + L + ED F +V
Sbjct: 56 TGQECAVKVISKRQVKQ--KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF--YLVG 111
Query: 466 EYAPNGTVF-EHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524
E G +F E + K +D RII + YMH + H +L + L
Sbjct: 112 EVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMH---KNKIVHRDLKPENLLL 165
Query: 525 ---TDDYAAKVAEICFTTIALPKSKVSDDIENS------VLPPLADPETNIYSFGILMLE 575
+ D ++ + +T K+ D I + VL D + +++S G+++
Sbjct: 166 ESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYI 225
Query: 576 IISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTD 635
++SG P+ E I K ++ +F+ + + + E K+ I+
Sbjct: 226 LLSGCPPFNGANEYDILK--------------KVEKGKYTFELPQWKKVSESAKDLIRKM 271
Query: 636 LRQRPTMN 643
L P+M
Sbjct: 272 LTYVPSMR 279
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
+ ++V S+++H+N V++I E+D+ + +V EY T+ E+ I+ L +
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCY--YLVMEYIEGPTLSEY--IESHGPLSVDTA 113
Query: 491 MRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDD 550
+ T L + H + + H ++ I + + K+ + IA S+ S
Sbjct: 114 INF---TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFG---IAKALSETSLT 167
Query: 551 IENSVL-------PPLADPE-----TNIYSFGILMLEIISGKLPYCEEKELSI 591
N VL P A E T+IYS GI++ E++ G+ P+ E +SI
Sbjct: 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI 220
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 107/271 (39%), Gaps = 56/271 (20%)
Query: 401 KGTLSSGVEIA------VAATAITSSKDWLKSQEMAYRKQVDTLSR-INHKNFVNLIGYC 453
KG + EI+ V A I LK + ++ R + H++ V G+
Sbjct: 51 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF 110
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARM---RIIMGTAYCLQYMHHELNP 510
ED++ +V E ++ E LH + + AR +I++G QY+H
Sbjct: 111 EDNDFV--FVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGC----QYLHRNR-- 161
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL---PKSKVSDDIENSVLPPLADP----- 562
V H +L ++L +D K+ + T + KV N + P +
Sbjct: 162 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 563 ETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622
E +++S G +M ++ GK P+ SC+ + L+ K+NE
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPF--------------------ETSCLKETYLR-IKKNEYS 259
Query: 623 -------AICEVIKECIKTDLRQRPTMNDII 646
+I++ ++TD RPT+N+++
Sbjct: 260 IPKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 107/271 (39%), Gaps = 56/271 (20%)
Query: 401 KGTLSSGVEIA------VAATAITSSKDWLKSQEMAYRKQVDTLSR-INHKNFVNLIGYC 453
KG + EI+ V A I LK + ++ R + H++ V G+
Sbjct: 49 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF 108
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARM---RIIMGTAYCLQYMHHELNP 510
ED++ +V E ++ E LH + + AR +I++G QY+H
Sbjct: 109 EDNDFV--FVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGC----QYLHRNR-- 159
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL---PKSKVSDDIENSVLPPLADP----- 562
V H +L ++L +D K+ + T + KV N + P +
Sbjct: 160 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 563 ETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622
E +++S G +M ++ GK P+ SC+ + L+ K+NE
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPF--------------------ETSCLKETYLR-IKKNEYS 257
Query: 623 -------AICEVIKECIKTDLRQRPTMNDII 646
+I++ ++TD RPT+N+++
Sbjct: 258 IPKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 20/198 (10%)
Query: 406 SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465
+G E AV + K K+ + + ++V L +++H N + L + ED F +V
Sbjct: 74 TGQECAVKVISKRQVKQ--KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF--YLVG 129
Query: 466 EYAPNGTVFEHL-HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524
E G +F+ + K +D RII + YMH + H +L + L
Sbjct: 130 EVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMH---KNKIVHRDLKPENLLL 183
Query: 525 ---TDDYAAKVAEICFTTIALPKSKVSDDIENS------VLPPLADPETNIYSFGILMLE 575
+ D ++ + +T K+ D I + VL D + +++S G+++
Sbjct: 184 ESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYI 243
Query: 576 IISGKLPYCEEKELSIEK 593
++SG P+ E I K
Sbjct: 244 LLSGCPPFNGANEYDILK 261
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 20/198 (10%)
Query: 406 SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465
+G E AV + K K+ + + ++V L +++H N + L + ED F +V
Sbjct: 73 TGQECAVKVISKRQVKQ--KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF--YLVG 128
Query: 466 EYAPNGTVFEHL-HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524
E G +F+ + K +D RII + YMH + H +L + L
Sbjct: 129 EVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMH---KNKIVHRDLKPENLLL 182
Query: 525 ---TDDYAAKVAEICFTTIALPKSKVSDDIENS------VLPPLADPETNIYSFGILMLE 575
+ D ++ + +T K+ D I + VL D + +++S G+++
Sbjct: 183 ESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYI 242
Query: 576 IISGKLPYCEEKELSIEK 593
++SG P+ E I K
Sbjct: 243 LLSGCPPFNGANEYDILK 260
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 106/271 (39%), Gaps = 56/271 (20%)
Query: 401 KGTLSSGVEIA------VAATAITSSKDWLK-SQEMAYRKQVDTLSRINHKNFVNLIGYC 453
KG + EI+ V A I LK Q ++ + H++ V G+
Sbjct: 25 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF 84
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARM---RIIMGTAYCLQYMHHELNP 510
ED++ +V E ++ E LH + + AR +I++G QY+H
Sbjct: 85 EDNDFV--FVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGC----QYLHRNR-- 135
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL---PKSKVSDDIENSVLPPLADP----- 562
V H +L ++L +D K+ + T + KV N + P +
Sbjct: 136 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 563 ETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622
E +++S G +M ++ GK P+ SC+ + L+ K+NE
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPF--------------------ETSCLKETYLR-IKKNEYS 233
Query: 623 -------AICEVIKECIKTDLRQRPTMNDII 646
+I++ ++TD RPT+N+++
Sbjct: 234 IPKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 108/271 (39%), Gaps = 29/271 (10%)
Query: 396 GCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEM-AYRKQVDTLSRI-NHKNFVNLIGYC 453
G + G E AV A+ K + E A ++ +S + H+N VNL+G C
Sbjct: 60 GKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWN----ARMR-IIMGTAYCLQYMHHEL 508
P +++ EY G + L K LD +R ++ ++ Q M
Sbjct: 120 THGGPV--LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA 177
Query: 509 NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK----------VSDDIENSVLPP 558
+ H ++++ + LT+ + AK+ + + S V S+
Sbjct: 178 SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC 237
Query: 559 LADPETNIYSFGILMLEIIS-GKLPY----CEEKELSIEK---WAADYLNEPRNFSCMID 610
+ +++++S+GIL+ EI S G PY K + K A P+N ++
Sbjct: 238 VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ 297
Query: 611 P--SLKSFKQNELEAICEVIKECIKTDLRQR 639
+L+ + + IC ++E + D R+R
Sbjct: 298 ACWALEPTHRPTFQQICSFLQEQAQEDRRER 328
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 20/198 (10%)
Query: 406 SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465
+G E AV + K K+ + + ++V L +++H N + L + ED F +V
Sbjct: 50 TGQECAVKVISKRQVKQ--KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF--YLVG 105
Query: 466 EYAPNGTVFEHL-HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524
E G +F+ + K +D RII + YMH + H +L + L
Sbjct: 106 EVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYMH---KNKIVHRDLKPENLLL 159
Query: 525 ---TDDYAAKVAEICFTTIALPKSKVSDDIENS------VLPPLADPETNIYSFGILMLE 575
+ D ++ + +T K+ D I + VL D + +++S G+++
Sbjct: 160 ESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYI 219
Query: 576 IISGKLPYCEEKELSIEK 593
++SG P+ E I K
Sbjct: 220 LLSGCPPFNGANEYDILK 237
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 130/353 (36%), Gaps = 80/353 (22%)
Query: 361 SGQLQKAFVTGVPKLNRLELDTACEDFSNIIDT--------QSGCTIYKGTLSSGVE--- 409
G+L+ +++ V + L LD CE + G + +G +E
Sbjct: 26 GGELKTGYLSIVMDPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADA 85
Query: 410 --IAVAATAITSSKDWLK-----SQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNR 461
I AT T + LK S+ A ++ L I H N VNL+G C +P
Sbjct: 86 FGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT--KPGGP 143
Query: 462 MMVF-EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY-----------MHHELN 509
+MV E+ G + +L K + + + + L++ M +
Sbjct: 144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 203
Query: 510 PPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIE--NSVLP-PLADPET-- 564
H +L++ I L++ V +IC +A K D + ++ LP PET
Sbjct: 204 RKCIHRDLAARNILLSE---KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 260
Query: 565 --------NIYSFGILMLEIIS-GKLPY---------CEEKELSIEKWAADYLNEPRNFS 606
+++SFG+L+ EI S G PY C + A DY P +
Sbjct: 261 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY-TTPEMYQ 319
Query: 607 CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
M+D C + QRPT ++++ L ++ + +Q
Sbjct: 320 TMLD--------------------CWHGEPSQRPTFSELVEHLGNLLQANAQQ 352
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 111/275 (40%), Gaps = 31/275 (11%)
Query: 390 IIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMA-YRKQVDTLSRINHKNFVN 448
++ Q G + S + A+ S ++ L A + ++ L + +H N V
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 449 LIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL 508
LIG C +P +V E G L E L ++++ A ++Y+ +
Sbjct: 177 LIGVCTQKQPI--YIVMELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 509 NPPVAHSNLSSHCIYLTDDYAAKVAEICFT----------TIALPKSKVSDDIENSVLPP 558
H +L++ +T+ K+++ + + L + V ++
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYG 290
Query: 559 LADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617
E++++SFGIL+ E S G PY LS ++ +++ + C P L
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASPY---PNLSNQQ-TREFVEKGGRLPC---PELCP-- 341
Query: 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+A+ ++++C + QRP+ + I +L+ +
Sbjct: 342 ----DAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 108/275 (39%), Gaps = 31/275 (11%)
Query: 390 IIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMA-YRKQVDTLSRINHKNFVN 448
++ Q G + S + A+ S ++ L A + ++ L + +H N V
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 449 LIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL 508
LIG C +P +V E G L E L ++++ A ++Y+ +
Sbjct: 177 LIGVCTQKQPI--YIVMELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 509 NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADP------ 562
H +L++ +T+ K+++ + + V P
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 563 ----ETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617
E++++SFGIL+ E S G PY LS ++ +++ + C P L
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASPY---PNLSNQQ-TREFVEKGGRLPC---PELCP-- 341
Query: 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+A+ ++++C + QRP+ + I +L+ +
Sbjct: 342 ----DAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 20/206 (9%)
Query: 396 GCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEM-AYRKQVDTLSRI-NHKNFVNLIGYC 453
G + G E AV A+ K + E A ++ +S + H+N VNL+G C
Sbjct: 52 GKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 111
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWN----ARMR-IIMGTAYCLQYMHHEL 508
P +++ EY G + L K LD +R ++ ++ Q M
Sbjct: 112 THGGPV--LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA 169
Query: 509 NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK----------VSDDIENSVLPP 558
+ H ++++ + LT+ + AK+ + + S V S+
Sbjct: 170 SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC 229
Query: 559 LADPETNIYSFGILMLEIIS-GKLPY 583
+ +++++S+GIL+ EI S G PY
Sbjct: 230 VYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 108/277 (38%), Gaps = 68/277 (24%)
Query: 401 KGTLSSGVEIA------VAATAITSSKDWLKSQEMAYRKQVDTLSR-INHKNFVNLIGYC 453
KG + EI+ V A I LK + ++ R + H++ V G+
Sbjct: 31 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF 90
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARM---RIIMGTAYCLQYMHHELNP 510
ED++ +V E ++ E LH + + AR +I++G QY+H
Sbjct: 91 EDNDFV--FVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGC----QYLHRNR-- 141
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIE---------NSVLPPLAD 561
V H +L ++L +D K+ + T KV D E N + P +
Sbjct: 142 -VIHRDLKLGNLFLNEDLEVKIGDFGLAT------KVEYDGERKKTLCGTPNYIAPEVLS 194
Query: 562 P-----ETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616
E +++S G +M ++ GK P+ SC+ + L+
Sbjct: 195 KKGHSFEVDVWSIGCIMYTLLVGKPPF--------------------ETSCLKETYLR-I 233
Query: 617 KQNELE-------AICEVIKECIKTDLRQRPTMNDII 646
K+NE +I++ ++TD RPT+N+++
Sbjct: 234 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 108/277 (38%), Gaps = 68/277 (24%)
Query: 401 KGTLSSGVEIA------VAATAITSSKDWLKSQEMAYRKQVDTLSR-INHKNFVNLIGYC 453
KG + EI+ V A I LK + ++ R + H++ V G+
Sbjct: 27 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF 86
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARM---RIIMGTAYCLQYMHHELNP 510
ED++ +V E ++ E LH + + AR +I++G QY+H
Sbjct: 87 EDNDFV--FVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGC----QYLHRNR-- 137
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIE---------NSVLPPLAD 561
V H +L ++L +D K+ + T KV D E N + P +
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLAT------KVEYDGERKKTLCGTPNYIAPEVLS 190
Query: 562 P-----ETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616
E +++S G +M ++ GK P+ SC+ + L+
Sbjct: 191 KKGHSFEVDVWSIGCIMYTLLVGKPPF--------------------ETSCLKETYLR-I 229
Query: 617 KQNELE-------AICEVIKECIKTDLRQRPTMNDII 646
K+NE +I++ ++TD RPT+N+++
Sbjct: 230 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 50 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 106
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H NL + I ++D + K+A+ F L +
Sbjct: 107 LLDMAAQIAEGMAFIE-ERN--YIHRNLRAANILVSDTLSCKIAD--FGLARLIEDNEYT 161
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 162 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 207
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 108/277 (38%), Gaps = 68/277 (24%)
Query: 401 KGTLSSGVEIA------VAATAITSSKDWLKSQEMAYRKQVDTLSR-INHKNFVNLIGYC 453
KG + EI+ V A I LK + ++ R + H++ V G+
Sbjct: 27 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF 86
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARM---RIIMGTAYCLQYMHHELNP 510
ED++ +V E ++ E LH + + AR +I++G QY+H
Sbjct: 87 EDNDFV--FVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGC----QYLHRNR-- 137
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIE---------NSVLPPLAD 561
V H +L ++L +D K+ + T KV D E N + P +
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLAT------KVEYDGERKKTLCGTPNYIAPEVLS 190
Query: 562 P-----ETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616
E +++S G +M ++ GK P+ SC+ + L+
Sbjct: 191 KKGHSFEVDVWSIGCIMYTLLVGKPPF--------------------ETSCLKETYLR-I 229
Query: 617 KQNELE-------AICEVIKECIKTDLRQRPTMNDII 646
K+NE +I++ ++TD RPT+N+++
Sbjct: 230 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 11/130 (8%)
Query: 500 CLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF---TTIALPKSKVSDDIENSVL 556
L Y+H + V H ++ S I LT D K+++ F + +PK K +
Sbjct: 153 ALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMA 209
Query: 557 PP-----LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611
P L E +I+S GI+++E++ G+ PY + + K D S + P
Sbjct: 210 PEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSP 269
Query: 612 SLKSFKQNEL 621
L+ F + L
Sbjct: 270 VLRDFLERML 279
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EYAP G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EYAP G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLE 575
+ + +A +V + P+ ++ +I +L + + ++ G+L+ E
Sbjct: 175 DQQGYIKVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIYE 230
Query: 576 IISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 71/174 (40%), Gaps = 21/174 (12%)
Query: 432 RKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARM 491
+ +++ L + H++ L E MV EY P G +F++ I D L
Sbjct: 56 KTEIEALKNLRHQHICQLYHVLETANKI--FMVLEYCPGGELFDY--IISQDRLSEEETR 111
Query: 492 RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI 551
+ + Y+H + AH +L + L D+Y K+ I F A PK +
Sbjct: 112 VVFRQIVSAVAYVHSQ---GYAHRDLKPENL-LFDEYH-KLKLIDFGLCAKPKGNKDYHL 166
Query: 552 ENS------VLPPLAD------PETNIYSFGILMLEIISGKLPYCEEKELSIEK 593
+ P L E +++S GIL+ ++ G LP+ ++ +++ K
Sbjct: 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYK 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 107/266 (40%), Gaps = 35/266 (13%)
Query: 407 GVEIAVAATAITSSKDWLKSQEM-AYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMV 464
G E AV A+ K + E A ++ +S + H+N VNL+G C P +++
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV--LVI 128
Query: 465 FEYAPNGTVFEHLHIKEMDHLDWN-----------ARMRIIMGTAYCLQYMHHELNPPVA 513
EY G + L K L+++ + ++ ++ Q M +
Sbjct: 129 TEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCI 188
Query: 514 HSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK----------VSDDIENSVLPPLADPE 563
H ++++ + LT+ + AK+ + + S V S+ + +
Sbjct: 189 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 248
Query: 564 TNIYSFGILMLEIIS-GKLPY----CEEKELSIEK---WAADYLNEPRNFSCMIDP--SL 613
++++S+GIL+ EI S G PY K + K A P+N ++ +L
Sbjct: 249 SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 308
Query: 614 KSFKQNELEAICEVIKECIKTDLRQR 639
+ + + IC ++E + D R+R
Sbjct: 309 EPTHRPTFQQICSFLQEQAQEDRRER 334
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EYAP G +F HL E + A++ + + L ++ +L P
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 175
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLE 575
+ + +A +V + P+ ++ +I +L + + ++ G+L+ E
Sbjct: 176 DQQGYIKVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIYE 231
Query: 576 IISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EYAP G +F HL E + A++ + + L ++ +L P
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 175
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLE 575
+ + +A +V + P+ ++ +I +L + + ++ G+L+ E
Sbjct: 176 DQQGYIKVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIYE 231
Query: 576 IISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V +T P+ + I L + + ++ G+L+
Sbjct: 176 DQQGY-IQVTDFGFAKRVKGRTWTLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 230
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EYAP G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLE 575
+ + +A +V + P+ ++ +I +L + + ++ G+L+ E
Sbjct: 175 DQQGYIKVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIYE 230
Query: 576 IISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EYAP G +F HL E + A++ + + L ++ +L P
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 175
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLE 575
+ + +A +V + P+ ++ +I +L + + ++ G+L+ E
Sbjct: 176 DQQGYIKVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIYE 231
Query: 576 IISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EYAP G +F HL E + A++ + + L ++ +L P
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 175
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLE 575
+ + +A +V + P+ ++ +I +L + + ++ G+L+ E
Sbjct: 176 DQQGYIKVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIYE 231
Query: 576 IISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 103/268 (38%), Gaps = 60/268 (22%)
Query: 426 SQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVF-EYAPNGTVFEHLHIKEMD 483
S+ A ++ L I H N VNL+G C +P +MV E+ G + +L K +
Sbjct: 74 SEHRALMSELKILIHIGHHLNVVNLLGACT--KPGGPLMVIVEFCKFGNLSTYLRSKRNE 131
Query: 484 HL---------DWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAE 534
+ D+ +I + + M + H +L++ I L++ V +
Sbjct: 132 FVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSE---KNVVK 188
Query: 535 ICFTTIALPKSKVSDDIE--NSVLP-PLADPET----------NIYSFGILMLEIIS-GK 580
IC +A K D + ++ LP PET +++SFG+L+ EI S G
Sbjct: 189 ICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248
Query: 581 LPY---------CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKEC 631
PY C + A DY P + M+D C
Sbjct: 249 SPYPGVKIDEEFCRRLKEGTRMRAPDY-TTPEMYQTMLD--------------------C 287
Query: 632 IKTDLRQRPTMNDIIVQLRQVINISPEQ 659
+ QRPT ++++ L ++ + +Q
Sbjct: 288 WHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 101 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 160
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V +T P+ + I L + + ++ G+L+
Sbjct: 161 DQQGY-IQVTDFGFAKRVKGRTWTLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 215
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 216 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 263
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EYAP G +F HL E + A++ + + L ++ +L P
Sbjct: 116 NLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLE 575
+ + +A +V + P+ ++ +I +L + + ++ G+L+ E
Sbjct: 176 DQQGYIKVADFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIYE 231
Query: 576 IISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 62 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 118
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H +L + I ++D + K+A+ F L +
Sbjct: 119 LLDMAAQIAEGMAFIE-ERN--YIHRDLRAANILVSDTLSCKIAD--FGLARLIEDNEXT 173
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 174 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 219
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 60 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 116
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H +L + I ++D + K+A+ F L +
Sbjct: 117 LLDMAAQIAEGMAFIE-ERN--YIHRDLRAANILVSDTLSCKIAD--FGLARLIEDNEXT 171
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 172 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 75/177 (42%), Gaps = 18/177 (10%)
Query: 420 SKDWLKSQEMAYR--KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL 477
+K L +M R +++ L + H + + L + + +MV EYA N +F++
Sbjct: 47 NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI--IMVIEYAGN-ELFDY- 102
Query: 478 HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF 537
I + D + R ++Y H + H +L + L + K+A+
Sbjct: 103 -IVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 158
Query: 538 TTIALPKS--KVSDDIENSVLPPL------ADPETNIYSFGILMLEIISGKLPYCEE 586
+ I + K S N P + A PE +++S G+++ ++ +LP+ +E
Sbjct: 159 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 75/177 (42%), Gaps = 18/177 (10%)
Query: 420 SKDWLKSQEMAYR--KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL 477
+K L +M R +++ L + H + + L + + +MV EYA N +F++
Sbjct: 48 NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI--IMVIEYAGN-ELFDY- 103
Query: 478 HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF 537
I + D + R ++Y H + H +L + L + K+A+
Sbjct: 104 -IVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 159
Query: 538 TTIALPKS--KVSDDIENSVLPPL------ADPETNIYSFGILMLEIISGKLPYCEE 586
+ I + K S N P + A PE +++S G+++ ++ +LP+ +E
Sbjct: 160 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 63 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 119
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H +L + I ++D + K+A+ F L +
Sbjct: 120 LLDMAAQIAEGMAFIE-ERN--YIHRDLRAANILVSDTLSCKIAD--FGLARLIEDNEXT 174
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 175 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 220
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 110
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H +L + I ++D + K+A+ F L +
Sbjct: 111 LLDMAAQIAEGMAFIE-ERN--YIHRDLRAANILVSDTLSCKIAD--FGLARLIEDAEXT 165
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 56 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 112
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H +L + I ++D + K+A+ F L +
Sbjct: 113 LLDMAAQIAEGMAFIE-ERN--YIHRDLRAANILVSDTLSCKIAD--FGLARLIEDNEXT 167
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 168 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 55 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 111
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H +L + I ++D + K+A+ F L +
Sbjct: 112 LLDMAAQIAEGMAFIE-ERN--YIHRDLRAANILVSDTLSCKIAD--FGLARLIEDNEXT 166
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 167 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 212
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 110
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H +L + I ++D + K+A+ F L +
Sbjct: 111 LLDMAAQIAEGMAFIE-ERN--YIHRDLRAANILVSDTLSCKIAD--FGLARLIEDNEXT 165
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 75/177 (42%), Gaps = 18/177 (10%)
Query: 420 SKDWLKSQEMAYR--KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL 477
+K L +M R +++ L + H + + L + + +MV EYA N +F++
Sbjct: 38 NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI--IMVIEYAGN-ELFDY- 93
Query: 478 HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF 537
I + D + R ++Y H + H +L + L + K+A+
Sbjct: 94 -IVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 149
Query: 538 TTIALPKS--KVSDDIENSVLPPL------ADPETNIYSFGILMLEIISGKLPYCEE 586
+ I + K S N P + A PE +++S G+++ ++ +LP+ +E
Sbjct: 150 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 75/177 (42%), Gaps = 18/177 (10%)
Query: 420 SKDWLKSQEMAYR--KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL 477
+K L +M R +++ L + H + + L + + +MV EYA N +F++
Sbjct: 42 NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI--IMVIEYAGN-ELFDY- 97
Query: 478 HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF 537
I + D + R ++Y H + H +L + L + K+A+
Sbjct: 98 -IVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 153
Query: 538 TTIALPKS--KVSDDIENSVLPPL------ADPETNIYSFGILMLEIISGKLPYCEE 586
+ I + K S N P + A PE +++S G+++ ++ +LP+ +E
Sbjct: 154 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 110
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H +L + I ++D + K+A+ F L +
Sbjct: 111 LLDMAAQIAEGMAFIE-ERN--YIHRDLRAANILVSDTLSCKIAD--FGLARLIEDNEXT 165
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 39/267 (14%)
Query: 407 GVEIAVAATAITSSKDWLKSQEM-AYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMV 464
G E AV A+ K + E A ++ +S + H+N VNL+G C P +++
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV--LVI 128
Query: 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVA----------- 513
EY G + L K L+ + I TA +H + VA
Sbjct: 129 TEYCCYGDLLNFLRRKSRV-LETDPAFAIANSTASTRDLLH--FSSQVAQGMAFLASKNC 185
Query: 514 -HSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK----------VSDDIENSVLPPLADP 562
H ++++ + LT+ + AK+ + + S V S+ +
Sbjct: 186 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 245
Query: 563 ETNIYSFGILMLEIIS-GKLPY----CEEKELSIEK---WAADYLNEPRNFSCMIDP--S 612
+++++S+GIL+ EI S G PY K + K A P+N ++ +
Sbjct: 246 QSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWA 305
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQR 639
L+ + + IC ++E + D R+R
Sbjct: 306 LEPTHRPTFQQICSFLQEQAQEDRRER 332
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 102/270 (37%), Gaps = 62/270 (22%)
Query: 426 SQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVF-EYAPNGTVFEHLHIKEMD 483
S+ A ++ L I H N VNL+G C +P +MV E+ G + +L K +
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACT--KPGGPLMVITEFCKFGNLSTYLRSKRNE 120
Query: 484 HLDWNARMRIIMGTAYCLQY-----------MHHELNPPVAHSNLSSHCIYLTDDYAAKV 532
+ + + L++ M + H +L++ I L++ V
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---KNV 177
Query: 533 AEICFTTIALPKSKVSDDIE--NSVLP-PLADPET----------NIYSFGILMLEIIS- 578
+IC +A K D + ++ LP PET +++SFG+L+ EI S
Sbjct: 178 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
Query: 579 GKLPY---------CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629
G PY C + A DY P + M+D
Sbjct: 238 GASPYPGVKIDEEFCRRLKEGTRMRAPDY-TTPEMYQTMLD------------------- 277
Query: 630 ECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
C + QRPT ++++ L ++ + +Q
Sbjct: 278 -CWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 60 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 116
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H +L + I ++D + K+A+ F L +
Sbjct: 117 LLDMAAQIAEGMAFIE-ERN--YIHRDLRAANILVSDTLSCKIAD--FGLARLIEDNEYT 171
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 172 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 64 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 120
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H +L + I ++D + K+A+ F L +
Sbjct: 121 LLDMAAQIAEGMAFIE-ERN--YIHRDLRAANILVSDTLSCKIAD--FGLARLIEDNEYT 175
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 176 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 221
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 100/261 (38%), Gaps = 58/261 (22%)
Query: 426 SQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVF-EYAPNGTVFEHLHIKEMD 483
S+ A ++ L I H N VNL+G C +P +MV E+ G + +L K +
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACT--KPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 484 HLDWNARMRIIMGTAYCLQY-------MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536
+ + + + + + Y M + H +L++ I L++ V +IC
Sbjct: 130 FVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSE---KNVVKIC 186
Query: 537 FTTIALPKSKVSDDIE--NSVLP-PLADPET----------NIYSFGILMLEIIS-GKLP 582
+A K D + ++ LP PET +++SFG+L+ EI S G P
Sbjct: 187 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
Query: 583 Y---------CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIK 633
Y C + A DY P + M+D C
Sbjct: 247 YPGVKIDEEFCRRLKEGTRMRAPDY-TTPEMYQTMLD--------------------CWH 285
Query: 634 TDLRQRPTMNDIIVQLRQVIN 654
+ QRPT ++++ L ++
Sbjct: 286 GEPSQRPTFSELVEHLGNLLQ 306
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 59 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 115
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H +L + I ++D + K+A+ F L +
Sbjct: 116 LLDMAAQIAEGMAFIE-ERN--YIHRDLRAANILVSDTLSCKIAD--FGLARLIEDNEYT 170
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 171 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 216
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 102/270 (37%), Gaps = 62/270 (22%)
Query: 426 SQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVF-EYAPNGTVFEHLHIKEMD 483
S+ A ++ L I H N VNL+G C +P +MV E+ G + +L K +
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACT--KPGGPLMVIVEFCKFGNLSTYLRSKRNE 120
Query: 484 HLDWNARMRIIMGTAYCLQY-----------MHHELNPPVAHSNLSSHCIYLTDDYAAKV 532
+ + + L++ M + H +L++ I L++ V
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---KNV 177
Query: 533 AEICFTTIALPKSKVSDDIE--NSVLP-PLADPET----------NIYSFGILMLEIIS- 578
+IC +A K D + ++ LP PET +++SFG+L+ EI S
Sbjct: 178 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
Query: 579 GKLPY---------CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629
G PY C + A DY P + M+D
Sbjct: 238 GASPYPGVKIDEEFCRRLKEGTRMRAPDY-TTPEMYQTMLD------------------- 277
Query: 630 ECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
C + QRPT ++++ L ++ + +Q
Sbjct: 278 -CWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 110
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H +L + I ++D + K+A+ F L +
Sbjct: 111 LLDMAAQIAEGMAFIE-ERN--YIHRDLRAANILVSDTLSCKIAD--FGLARLIEDNEYT 165
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 30/175 (17%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E +K++ L R+ HKN + L+ ++E MV EY G ++EM
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-------MQEMLDSVP 102
Query: 488 NARMRIIMGTAY-C-----LQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541
R + Y C L+Y+H + + H ++ + LT K++ + A
Sbjct: 103 EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE-A 158
Query: 542 LPKSKVSDDIENSVLPPLADP-------------ETNIYSFGILMLEIISGKLPY 583
L D S P P + +I+S G+ + I +G P+
Sbjct: 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 103/269 (38%), Gaps = 61/269 (22%)
Query: 426 SQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVF-EYAPNGTVFEHLHIKEMD 483
S+ A ++ L I H N VNL+G C +P +MV E+ G + +L K +
Sbjct: 73 SEHRALMSELKILIHIGHHLNVVNLLGACT--KPGGPLMVIVEFCKFGNLSTYLRSKRNE 130
Query: 484 HL----------DWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA 533
+ D+ +I + + M + H +L++ I L++ V
Sbjct: 131 FVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---KNVV 187
Query: 534 EICFTTIALPKSKVSDDIE--NSVLP-PLADPET----------NIYSFGILMLEIIS-G 579
+IC +A K D + ++ LP PET +++SFG+L+ EI S G
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 247
Query: 580 KLPY---------CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKE 630
PY C + A DY P + M+D
Sbjct: 248 ASPYPGVKIDEEFCRRLKEGTRMRAPDY-TTPEMYQTMLD-------------------- 286
Query: 631 CIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
C + QRPT ++++ L ++ + +Q
Sbjct: 287 CWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 102/270 (37%), Gaps = 62/270 (22%)
Query: 426 SQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVF-EYAPNGTVFEHLHIKEMD 483
S+ A ++ L I H N VNL+G C +P +MV E+ G + +L K +
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACT--KPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 484 HLDWNARMRIIMGTAYCLQY-----------MHHELNPPVAHSNLSSHCIYLTDDYAAKV 532
+ + + L++ M + H +L++ I L++ V
Sbjct: 130 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---KNV 186
Query: 533 AEICFTTIALPKSKVSDDIE--NSVLP-PLADPET----------NIYSFGILMLEIIS- 578
+IC +A K D + ++ LP PET +++SFG+L+ EI S
Sbjct: 187 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
Query: 579 GKLPY---------CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629
G PY C + A DY P + M+D
Sbjct: 247 GASPYPGVKIDEEFCRRLKEGTRMRAPDY-TTPEMYQTMLD------------------- 286
Query: 630 ECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
C + QRPT ++++ L ++ + +Q
Sbjct: 287 -CWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 89/197 (45%), Gaps = 36/197 (18%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW 487
E Y+ ++ L +++H N V L+ +D + MVFE G V E +K + +
Sbjct: 81 EQVYQ-EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLS--ED 137
Query: 488 NARMR---IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544
AR +I G ++Y+H++ + H ++ + + +D K+A+ + +
Sbjct: 138 QARFYFQDLIKG----IEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSN----E 186
Query: 545 SKVSDDIENSVL--PPLADPET-------------NIYSFGILMLEIISGKLPYCEEKEL 589
K SD + ++ + P PE+ ++++ G+ + + G+ P+ +E+ +
Sbjct: 187 FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246
Query: 590 ----SIEKWAADYLNEP 602
I+ A ++ ++P
Sbjct: 247 CLHSKIKSQALEFPDQP 263
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + + + ++ H+ V L EP ++ EY NG++ + L L N
Sbjct: 49 AFLAEANLMKQLQHQRLVRLYAVV-TQEPI--YIITEYMENGSLVDFLKTPSGIKLTINK 105
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ + A + ++ E N H +L + I ++D + K+A+ F L +
Sbjct: 106 LLDMAAQIAEGMAFIE-ERN--YIHRDLRAANILVSDTLSCKIAD--FGLARLIEDNEYT 160
Query: 550 DIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
E + P PE ++++SFGIL+ EI++ G++PY
Sbjct: 161 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 206
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 17/171 (9%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 136 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP----E 191
Query: 516 NL---SSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGI 571
NL I +TD +A +V + P+ + I L + + ++ G+
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGV 247
Query: 572 LMLEIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
L+ E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 248 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 298
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EYAP G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGLAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 412 VAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNG 471
VA + S+ + E R++++ + ++H N + L Y D ++ EYAP G
Sbjct: 51 VALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRI--YLILEYAPRG 108
Query: 472 TVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAK 531
+++ L ++ D I+ A L Y H V H ++ + L K
Sbjct: 109 ELYKEL--QKSCTFDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELK 163
Query: 532 VAEICFTTIALPKSKVSDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPY 583
+A+ ++ A + + LPP + + + +++ G+L E++ G P+
Sbjct: 164 IADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EYAP G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLE 575
+ + A +V + P+ ++ +I +L + + ++ G+L+ E
Sbjct: 175 DQQGYIKVTDFGLAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIYE 230
Query: 576 IISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 176 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 230
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 136 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 195
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V +T P+ + I L + + ++ G+L+
Sbjct: 196 DQQGY-IQVTDFGFAKRVKGATWTLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 250
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 251 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 298
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 176 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 230
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 102/270 (37%), Gaps = 62/270 (22%)
Query: 426 SQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVF-EYAPNGTVFEHLHIKEMD 483
S+ A ++ L I H N VNL+G C +P +MV E+ G + +L K +
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACT--KPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 484 HLDWNARMRIIMGTAYCLQY-----------MHHELNPPVAHSNLSSHCIYLTDDYAAKV 532
+ + + L++ M + H +L++ I L++ V
Sbjct: 130 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---KNV 186
Query: 533 AEICFTTIALPKSKVSDDIE--NSVLP-PLADPET----------NIYSFGILMLEIIS- 578
+IC +A K D + ++ LP PET +++SFG+L+ EI S
Sbjct: 187 VKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
Query: 579 GKLPY---------CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629
G PY C + A DY P + M+D
Sbjct: 247 GASPYPGVKIDEEFCRRLKEGTRMRAPDY-TTPEMYQTMLD------------------- 286
Query: 630 ECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
C + QRPT ++++ L ++ + +Q
Sbjct: 287 -CWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 102/270 (37%), Gaps = 62/270 (22%)
Query: 426 SQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVF-EYAPNGTVFEHLHIKEMD 483
S+ A ++ L I H N VNL+G C +P +MV E+ G + +L K +
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACT--KPGGPLMVITEFCKFGNLSTYLRSKRNE 120
Query: 484 HLDWNARMRIIMGTAYCLQY-----------MHHELNPPVAHSNLSSHCIYLTDDYAAKV 532
+ + + L++ M + H +L++ I L++ V
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---KNV 177
Query: 533 AEICFTTIALPKSKVSDDIE--NSVLP-PLADPET----------NIYSFGILMLEIIS- 578
+IC +A K D + ++ LP PET +++SFG+L+ EI S
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
Query: 579 GKLPY---------CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629
G PY C + A DY P + M+D
Sbjct: 238 GASPYPGVKIDEEFCRRLKEGTRMRAPDY-TTPEMYQTMLD------------------- 277
Query: 630 ECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
C + QRPT ++++ L ++ + +Q
Sbjct: 278 -CWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 176 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 230
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 176 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 230
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 176 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 230
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 412 VAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNG 471
VA S D +++A R ++ L ++ H+N VNL+ C+ + + +VFE+ +
Sbjct: 53 VAIKKFLESDDDKMVKKIAMR-EIKLLKQLRHENLVNLLEVCKKKKRW--YLVFEFVDH- 108
Query: 472 TVFEHLHIKEMDHLDWNARMR----IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD 527
T+ + L + + LD+ + II G +C H N + H ++ I ++
Sbjct: 109 TILDDLELFP-NGLDYQVVQKYLFQIINGIGFC-----HSHN--IIHRDIKPENILVSQS 160
Query: 528 YAAKVAEICFT-TIALPKSKVSDDI 551
K+ + F T+A P D++
Sbjct: 161 GVVKLCDFGFARTLAAPGEVYDDEV 185
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 167
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 168 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 222
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 223 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 270
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 167
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 168 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 222
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 223 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 270
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLE 575
+ + +A +V + P+ ++ +I +L + + ++ G+L+ E
Sbjct: 175 DQQGYIKVADFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIYE 230
Query: 576 IISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 20/198 (10%)
Query: 406 SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465
+G E AV + K K+ + + ++V L +++H N L + ED F +V
Sbjct: 50 TGQECAVKVISKRQVKQ--KTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYF--YLVG 105
Query: 466 EYAPNGTVFEHL-HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524
E G +F+ + K +D RII + Y H + H +L + L
Sbjct: 106 EVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYXH---KNKIVHRDLKPENLLL 159
Query: 525 ---TDDYAAKVAEICFTTIALPKSKVSDDIENS------VLPPLADPETNIYSFGILMLE 575
+ D ++ + +T K D I + VL D + +++S G+++
Sbjct: 160 ESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYI 219
Query: 576 IISGKLPYCEEKELSIEK 593
++SG P+ E I K
Sbjct: 220 LLSGCPPFNGANEYDILK 237
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 102/270 (37%), Gaps = 62/270 (22%)
Query: 426 SQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVF-EYAPNGTVFEHLHIKEMD 483
S+ A ++ L I H N VNL+G C +P +MV E+ G + +L K +
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACT--KPGGPLMVITEFCKFGNLSTYLRSKRNE 120
Query: 484 HLDWNARMRIIMGTAYCLQY-----------MHHELNPPVAHSNLSSHCIYLTDDYAAKV 532
+ + + L++ M + H +L++ I L++ V
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---KNV 177
Query: 533 AEICFTTIALPKSKVSDDIE--NSVLP-PLADPET----------NIYSFGILMLEIIS- 578
+IC +A K D + ++ LP PET +++SFG+L+ EI S
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
Query: 579 GKLPY---------CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629
G PY C + A DY P + M+D
Sbjct: 238 GASPYPGVKIDEEFCRRLKEGTRMRAPDY-TTPEMYQTMLD------------------- 277
Query: 630 ECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
C + QRPT ++++ L ++ + +Q
Sbjct: 278 -CWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 103/270 (38%), Gaps = 62/270 (22%)
Query: 426 SQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVF-EYAPNGTVFEHLHIKEMD 483
S+ A ++ L I H N VNL+G C +P +MV E+ G + +L K +
Sbjct: 74 SEHRALMSELKILIHIGHHLNVVNLLGACT--KPGGPLMVIVEFCKFGNLSTYLRSKRNE 131
Query: 484 HL-----------DWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKV 532
+ D+ +I + + M + H +L++ I L++ V
Sbjct: 132 FVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---KNV 188
Query: 533 AEICFTTIALPKSKVSDDIE--NSVLP-PLADPET----------NIYSFGILMLEIIS- 578
+IC +A K D + ++ LP PET +++SFG+L+ EI S
Sbjct: 189 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 248
Query: 579 GKLPY---------CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629
G PY C + A DY P + M+D
Sbjct: 249 GASPYPGVKIDEEFCRRLKEGTRMRAPDY-TTPEMYQTMLD------------------- 288
Query: 630 ECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
C + QRPT ++++ L ++ + +Q
Sbjct: 289 -CWHGEPSQRPTFSELVEHLGNLLQANAQQ 317
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 103/239 (43%), Gaps = 39/239 (16%)
Query: 433 KQVDTLSRINHKNFVNL-IGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH----LDW 487
K++ +S+ +H N V+ + DE + M + + +H+ + + +H LD
Sbjct: 57 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHI-VAKGEHKSGVLDE 115
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA-----L 542
+ I+ L+Y+H N + H ++ + I L +D + ++A+ + +
Sbjct: 116 STIATILREVLEGLEYLHK--NGQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 172
Query: 543 PKSKVSDDIENS---VLPPLA------DPETNIYSFGILMLEIISGKLPYCEEKELSIEK 593
++KV + + P + D + +I+SFGI +E+ +G PY + + +
Sbjct: 173 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-- 230
Query: 594 WAADYLNEPRNFSC------MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
N+P + M+ KSF++ +I C++ D +RPT +++
Sbjct: 231 LMLTLQNDPPSLETGVQDKEMLKKYGKSFRK--------MISLCLQKDPEKRPTAAELL 281
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 102/270 (37%), Gaps = 62/270 (22%)
Query: 426 SQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVF-EYAPNGTVFEHLHIKEMD 483
S+ A ++ L I H N VNL+G C +P +MV E+ G + +L K +
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACT--KPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 484 HLDWNARMRIIMGTAYCLQY-----------MHHELNPPVAHSNLSSHCIYLTDDYAAKV 532
+ + + L++ M + H +L++ I L++ V
Sbjct: 130 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---KNV 186
Query: 533 AEICFTTIALPKSKVSDDIE--NSVLP-PLADPET----------NIYSFGILMLEIIS- 578
+IC +A K D + ++ LP PET +++SFG+L+ EI S
Sbjct: 187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
Query: 579 GKLPY---------CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629
G PY C + A DY P + M+D
Sbjct: 247 GASPYPGVKIDEEFCRRLKEGTRMRAPDY-TTPEMYQTMLD------------------- 286
Query: 630 ECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
C + QRPT ++++ L ++ + +Q
Sbjct: 287 -CWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
Query: 426 SQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHL 485
S E+A K +D + + V G+ EDD+ +V E ++ E LH +
Sbjct: 74 STEIAIHKSLD------NPHVVGFHGFFEDDDFV--YVVLEICRRRSLLE-LHKRRKAVT 124
Query: 486 DWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT-IALPK 544
+ AR + T +QY+H N V H +L ++L DD K+ + T I
Sbjct: 125 EPEARY-FMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG 180
Query: 545 SKVSD--DIENSVLPPL-----ADPETNIYSFGILMLEIISGKLPY 583
+ D N + P + E +I+S G ++ ++ GK P+
Sbjct: 181 ERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLE 575
+ + +A +V + P+ + I L + + ++ G+L+ E
Sbjct: 175 DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIYE 230
Query: 576 IISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/88 (19%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNF 446
S+I+ + +++G ++ A + ++ +L+ ++ R + + L ++NHKN
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLF--AIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNI 69
Query: 447 VNLIGYCEDDEPFNRMMVFEYAPNGTVF 474
V L E+ +++++ E+ P G+++
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLY 97
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY P G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLE 575
+ + +A +V + P+ + I L + + ++ G+L+ E
Sbjct: 175 DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIYE 230
Query: 576 IISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
Query: 426 SQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHL 485
S E+A K +D + + V G+ EDD+ +V E ++ E LH +
Sbjct: 90 STEIAIHKSLD------NPHVVGFHGFFEDDDFV--YVVLEICRRRSLLE-LHKRRKAVT 140
Query: 486 DWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT-IALPK 544
+ AR + T +QY+H N V H +L ++L DD K+ + T I
Sbjct: 141 EPEARY-FMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG 196
Query: 545 SKVSD--DIENSVLPPL-----ADPETNIYSFGILMLEIISGKLPY 583
+ D N + P + E +I+S G ++ ++ GK P+
Sbjct: 197 ERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 103/239 (43%), Gaps = 39/239 (16%)
Query: 433 KQVDTLSRINHKNFVNL-IGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH----LDW 487
K++ +S+ +H N V+ + DE + M + + +H+ + + +H LD
Sbjct: 62 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHI-VAKGEHKSGVLDE 120
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA-----L 542
+ I+ L+Y+H N + H ++ + I L +D + ++A+ + +
Sbjct: 121 STIATILREVLEGLEYLHK--NGQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 177
Query: 543 PKSKVSDDIENS---VLPPLA------DPETNIYSFGILMLEIISGKLPYCEEKELSIEK 593
++KV + + P + D + +I+SFGI +E+ +G PY + + +
Sbjct: 178 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-- 235
Query: 594 WAADYLNEPRNFSC------MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
N+P + M+ KSF++ +I C++ D +RPT +++
Sbjct: 236 LMLTLQNDPPSLETGVQDKEMLKKYGKSFRK--------MISLCLQKDPEKRPTAAELL 286
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/88 (19%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNF 446
S+I+ + +++G ++ A + ++ +L+ ++ R + + L ++NHKN
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLF--AIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNI 69
Query: 447 VNLIGYCEDDEPFNRMMVFEYAPNGTVF 474
V L E+ +++++ E+ P G+++
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLY 97
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 39/267 (14%)
Query: 407 GVEIAVAATAITSSKDWLKSQEM-AYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMV 464
G E AV A+ K + E A ++ +S + H+N VNL+G C P +++
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV--LVI 128
Query: 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVA----------- 513
EY G + L K L+ + I T +H + VA
Sbjct: 129 TEYCCYGDLLNFLRRKSRV-LETDPAFAIANSTLSTRDLLH--FSSQVAQGMAFLASKNC 185
Query: 514 -HSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK----------VSDDIENSVLPPLADP 562
H ++++ + LT+ + AK+ + + S V S+ +
Sbjct: 186 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 245
Query: 563 ETNIYSFGILMLEIIS-GKLPY----CEEKELSIEK---WAADYLNEPRNFSCMIDP--S 612
+++++S+GIL+ EI S G PY K + K A P+N ++ +
Sbjct: 246 QSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWA 305
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQR 639
L+ + + IC ++E + D R+R
Sbjct: 306 LEPTHRPTFQQICSFLQEQAQEDRRER 332
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/114 (19%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 564 TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEA 623
++S GIL+ +++ G +P+ ++E+ L +F + P
Sbjct: 220 ATVWSLGILLYDMVCGDIPFERDQEI---------LEAELHFPAHVSPD----------- 259
Query: 624 ICEVIKECIKTDLRQRPTMNDIIVQ-----LRQVINISPEQAVPRLSPLWWAEL 672
C +I+ C+ RP++ +I++ + + ++P + P +PL W+ L
Sbjct: 260 CCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSKGGP--APLAWSLL 311
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 426 SQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHL 485
S E+A K +D + + V G+ EDD+ +V E ++ E LH +
Sbjct: 90 STEIAIHKSLD------NPHVVGFHGFFEDDDFV--YVVLEICRRRSLLE-LHKRRKAVT 140
Query: 486 DWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT---IAL 542
+ AR + T +QY+H N V H +L ++L DD K+ + T
Sbjct: 141 EPEARY-FMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG 196
Query: 543 PKSKVSDDIENSVLPPL-----ADPETNIYSFGILMLEIISGKLPY 583
+ K N + P + E +I+S G ++ ++ GK P+
Sbjct: 197 ERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P++ ++ +I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEA-LAPEI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 426 SQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHL 485
S E+A K +D + + V G+ EDD+ +V E ++ E LH +
Sbjct: 90 STEIAIHKSLD------NPHVVGFHGFFEDDDFV--YVVLEICRRRSLLE-LHKRRKAVT 140
Query: 486 DWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT---IAL 542
+ AR + T +QY+H N V H +L ++L DD K+ + T
Sbjct: 141 EPEARY-FMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG 196
Query: 543 PKSKVSDDIENSVLPPL-----ADPETNIYSFGILMLEIISGKLPY 583
+ K N + P + E +I+S G ++ ++ GK P+
Sbjct: 197 ERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 128 NNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIR 187
NN + I +R+PSL+RL LG EL R + +SE F+ L++ +
Sbjct: 145 NNPIESIPSYAFNRIPSLRRLDLG----------ELKRLSYISEGAFEG-LSNLRYLNLA 193
Query: 188 SVN-RKFGQYGFKIGEDSLHTNGDHSCANLPGS 219
N R+ I D L +G+H A PGS
Sbjct: 194 MCNLREIPNLTPLIKLDELDLSGNHLSAIRPGS 226
>pdb|2FZ0|A Chain A, Identification Of Yeast R-Snare Nyv1p As A Novel Longin
Domain Protein
Length = 149
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 521 CIYLTDDYAAKVAEICFTTIALPK 544
C Y TDD+ K +CFT + +PK
Sbjct: 79 CFYSTDDHDPKTVYVCFTLVDIPK 102
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 432 RKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARM 491
+ ++ +++++H +NL ED + +++ E+ G +F+ I D+ A +
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDK--YEMVLILEFLSGGELFDR--IAAEDYKMSEAEV 151
Query: 492 RIIMGTAYC--LQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF--TTIALPKS-- 545
M A C L++MH + H ++ I A+ V I F T P
Sbjct: 152 INYMRQA-CEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207
Query: 546 KVSDDIENSVLPPLADPE-----TNIYSFGILMLEIISGKLPYCEEKELSIEKWAA--DY 598
KV+ P + D E T++++ G+L ++SG P+ E +L + D+
Sbjct: 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW 267
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
+ FS + P K F IK ++ + R+R T++D +
Sbjct: 268 EFDEDAFSS-VSPEAKDF-----------IKNLLQKEPRKRLTVHDAL 303
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/155 (17%), Positives = 63/155 (40%), Gaps = 26/155 (16%)
Query: 513 AHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA------------ 560
H +L++ L + + KVA+ L + S P+
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRF 205
Query: 561 DPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619
+++++SFG+L+ E+++ G PY + + A P+ C
Sbjct: 206 TTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCP----------- 254
Query: 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+++ +V+++C + D RPT ++ ++ Q+++
Sbjct: 255 --DSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP----E 170
Query: 516 NL---SSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGI 571
NL I +TD +A +V + P+ ++ +I +L + + ++ G+
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEY-LAPEI---ILSKGYNKAVDWWALGV 226
Query: 572 LMLEIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
L+ E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 72/168 (42%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 136 NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 195
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 196 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 250
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 251 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 298
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP----E 170
Query: 516 NL---SSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGI 571
NL I +TD +A +V + P+ ++ +I +L + + ++ G+
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEY-LAPEI---ILSKGYNKAVDWWALGV 226
Query: 572 LMLEIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
L+ E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 72/168 (42%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 116 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 176 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 230
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 231 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 110 NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 169
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 170 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 224
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 225 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 272
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 117/286 (40%), Gaps = 41/286 (14%)
Query: 387 FSNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
F+ +I +Y GTL + G +I A ++ D + + + + + +H
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHP 83
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY- 503
N ++L+G C E + ++V Y +G + I+ H N ++ ++G + LQ
Sbjct: 84 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF--IRNETH---NPTVKDLIG--FGLQVA 135
Query: 504 --MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA- 560
M + + H +L++ L + + KVA+ K S + P+
Sbjct: 136 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 195
Query: 561 -----------DPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCM 608
+++++SFG+L+ E+++ G PY + I YL + R +
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI----TVYLLQGRR---L 248
Query: 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+ P + + EV+ +C RP+ ++++ ++ + +
Sbjct: 249 LQPEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 288
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 72/168 (42%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ + I L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 117/286 (40%), Gaps = 41/286 (14%)
Query: 387 FSNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
F+ +I +Y GTL + G +I A ++ D + + + + + +H
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHP 90
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY- 503
N ++L+G C E + ++V Y +G + I+ H N ++ ++G + LQ
Sbjct: 91 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF--IRNETH---NPTVKDLIG--FGLQVA 142
Query: 504 --MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA- 560
M + + H +L++ L + + KVA+ K S + P+
Sbjct: 143 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 561 -----------DPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCM 608
+++++SFG+L+ E+++ G PY + I YL + R +
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI----TVYLLQGRR---L 255
Query: 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+ P + + EV+ +C RP+ ++++ ++ + +
Sbjct: 256 LQPEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 17/171 (9%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 102 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP----E 157
Query: 516 NL---SSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGI 571
NL I +TD +A +V + P+ + I L + + ++ G+
Sbjct: 158 NLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEII----LSKGYNKAVDWWALGV 213
Query: 572 LMLEIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
L+ E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 214 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 264
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 117/286 (40%), Gaps = 41/286 (14%)
Query: 387 FSNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
F+ +I +Y GTL + G +I A ++ D + + + + + +H
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHP 89
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY- 503
N ++L+G C E + ++V Y +G + I+ H N ++ ++G + LQ
Sbjct: 90 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF--IRNETH---NPTVKDLIG--FGLQVA 141
Query: 504 --MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA- 560
M + + H +L++ L + + KVA+ K S + P+
Sbjct: 142 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 201
Query: 561 -----------DPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCM 608
+++++SFG+L+ E+++ G PY + I YL + R +
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI----TVYLLQGRR---L 254
Query: 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+ P + + EV+ +C RP+ ++++ ++ + +
Sbjct: 255 LQPEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 294
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 117/286 (40%), Gaps = 41/286 (14%)
Query: 387 FSNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
F+ +I +Y GTL + G +I A ++ D + + + + + +H
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHP 109
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY- 503
N ++L+G C E + ++V Y +G + I+ H N ++ ++G + LQ
Sbjct: 110 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF--IRNETH---NPTVKDLIG--FGLQVA 161
Query: 504 --MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA- 560
M + + H +L++ L + + KVA+ K S + P+
Sbjct: 162 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 561 -----------DPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCM 608
+++++SFG+L+ E+++ G PY + I YL + R +
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV----YLLQGRR---L 274
Query: 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+ P + + EV+ +C RP+ ++++ ++ + +
Sbjct: 275 LQPEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 314
>pdb|1AST|A Chain A, Structure Of Astacin And Implications For Activation Of
Astacins And Zinc-Ligation Of Collagenases
pdb|1IAA|A Chain A, Crystal Structures, Spectroscopic Features, And Catalytic
Properties Of Cobalt(Ii), Copper(Ii), Nickel(Ii), And
Mercury(Ii) Derivatives Of The Zinc Endopeptidase
Astacin. A Correlation Of Structure And Proteolytic
Activity
pdb|1IAB|A Chain A, Crystal Structures, Spectroscopic Features, And Catalytic
Properties Of Cobalt(Ii), Copper(Ii), Nickel(Ii), And
Mercury(Ii) Derivatives Of The Zinc Endopeptidase
Astacin. A Correlation Of Structure And Proteolytic
Activity
pdb|1IAC|A Chain A, Refined 1.8 Angstroms X-Ray Crystal Structure Of Astacin,
A Zinc-Endopeptidase From The Crayfish Astacus Astacus
L. Structure Determination, Refinement, Molecular
Structure And Comparison With Thermolysin
pdb|1IAD|A Chain A, Refined 1.8 Angstroms X-Ray Crystal Structure Of Astacin,
A Zinc-Endopeptidase From The Crayfish Astacus Astacus
L. Structure Determination, Refinement, Molecular
Structure And Comparison To Thermolysin
pdb|1IAE|A Chain A, Crystal Structures, Spectroscopic Features, And Catalytic
Properties Of Cobalt(Ii), Copper(Ii), Nickel(Ii), And
Mercury(Ii) Derivatives Of The Zinc Endopeptidase
Astacin. A Correlation Of Structure And Proteolytic
Activity
pdb|1QJI|A Chain A, Structure Of Astacin With A Transition-State Analogue
Inhibitor
pdb|1QJJ|A Chain A, Structure Of Astacin With A Hydroxamic Acid Inhibitor
Length = 200
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 359 GLSGQLQKAFVTGVPKLN-----RLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVA 413
G+SG Q A ++G+ +L R T D+ I + SGC Y G +S ++++
Sbjct: 21 GVSGADQSAILSGMQELEEKTCIRFVPRTTESDYVEIFTSGSGCWSYVGRISGAQQVSLQ 80
Query: 414 ATA 416
A
Sbjct: 81 ANG 83
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 117/286 (40%), Gaps = 41/286 (14%)
Query: 387 FSNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
F+ +I +Y GTL + G +I A ++ D + + + + + +H
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHP 110
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY- 503
N ++L+G C E + ++V Y +G + I+ H N ++ ++G + LQ
Sbjct: 111 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF--IRNETH---NPTVKDLIG--FGLQVA 162
Query: 504 --MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA- 560
M + + H +L++ L + + KVA+ K S + P+
Sbjct: 163 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 561 -----------DPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCM 608
+++++SFG+L+ E+++ G PY + I YL + R +
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI----TVYLLQGRR---L 275
Query: 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+ P + + EV+ +C RP+ ++++ ++ + +
Sbjct: 276 LQPEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 315
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 116/286 (40%), Gaps = 41/286 (14%)
Query: 387 FSNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
F+ +I +Y GTL + G +I A ++ D + + + + +H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII--MKDFSHP 91
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY- 503
N ++L+G C E + ++V Y +G + I+ H N ++ ++G + LQ
Sbjct: 92 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF--IRNETH---NPTVKDLIG--FGLQVA 143
Query: 504 --MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA- 560
M + + H +L++ L + + KVA+ K S + P+
Sbjct: 144 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 561 -----------DPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCM 608
+++++SFG+L+ E+++ G PY + I YL + R +
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI----TVYLLQGRR---L 256
Query: 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+ P + + EV+ +C RP+ ++++ ++ + +
Sbjct: 257 LQPEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 19/171 (11%)
Query: 425 KSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMD 483
K E +K++ L H N V L D + +V E G +FE IK+
Sbjct: 46 KRMEANTQKEITALKLCEGHPNIVKLHEVFHDQ--LHTFLVMELLNGGELFER--IKKKK 101
Query: 484 HLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD---YAAKVAEICFTTI 540
H I+ + +MH + V H +L + TD+ K+ + F +
Sbjct: 102 HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158
Query: 541 ALPKS---KVSDDIENSVLPPL-----ADPETNIYSFGILMLEIISGKLPY 583
P + K + P L D +++S G+++ ++SG++P+
Sbjct: 159 KPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP----E 170
Query: 516 NL---SSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGI 571
NL I +TD +A +V + P+ ++ +I ++ + + ++ G+
Sbjct: 171 NLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---IISKGYNKAVDWWALGV 226
Query: 572 LMLEIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
L+ E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 28/181 (15%)
Query: 426 SQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVF-EYAPNGTVFEHLHIKEMD 483
S+ A ++ L I H N VNL+G C +P +MV E+ G + +L K +
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACT--KPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 484 HLDWNARMRIIMGTAYCLQY-------MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536
+ + + + + + Y M + H +L++ I L++ K+ +
Sbjct: 130 FVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDF- 188
Query: 537 FTTIALPKSKVSDDIE--NSVLP-PLADPET----------NIYSFGILMLEIIS-GKLP 582
+A K D + ++ LP PET +++SFG+L+ EI S G P
Sbjct: 189 --GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
Query: 583 Y 583
Y
Sbjct: 247 Y 247
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 117/286 (40%), Gaps = 41/286 (14%)
Query: 387 FSNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
F+ +I +Y GTL + G +I A ++ D + + + + + +H
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHP 88
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY- 503
N ++L+G C E + ++V Y +G + I+ H N ++ ++G + LQ
Sbjct: 89 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF--IRNETH---NPTVKDLIG--FGLQVA 140
Query: 504 --MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA- 560
M + + H +L++ L + + KVA+ K S + P+
Sbjct: 141 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 200
Query: 561 -----------DPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCM 608
+++++SFG+L+ E+++ G PY + I YL + R +
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI----TVYLLQGRR---L 253
Query: 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+ P + + EV+ +C RP+ ++++ ++ + +
Sbjct: 254 LQPEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 293
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 55/288 (19%), Positives = 116/288 (40%), Gaps = 45/288 (15%)
Query: 387 FSNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
F+ +I +Y GTL + G +I A ++ D + + + + +H
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII--MKDFSHP 92
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY- 503
N ++L+G C E + ++V Y +G + I+ H N ++ ++G + LQ
Sbjct: 93 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF--IRNETH---NPTVKDLIG--FGLQVA 144
Query: 504 --MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA- 560
M + H +L++ L + + KVA+ L K D + N L
Sbjct: 145 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKE--FDSVHNKTGAKLPV 202
Query: 561 -------------DPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFS 606
+++++SFG+L+ E+++ G PY + I YL + R
Sbjct: 203 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI----TVYLLQGRR-- 256
Query: 607 CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
++ P + + EV+ +C RP+ ++++ ++ + +
Sbjct: 257 -LLQPEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 297
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 117/286 (40%), Gaps = 41/286 (14%)
Query: 387 FSNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
F+ +I +Y GTL + G +I A ++ D + + + + + +H
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHP 86
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY- 503
N ++L+G C E + ++V Y +G + I+ H N ++ ++G + LQ
Sbjct: 87 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF--IRNETH---NPTVKDLIG--FGLQVA 138
Query: 504 --MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA- 560
M + + H +L++ L + + KVA+ K S + P+
Sbjct: 139 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 561 -----------DPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCM 608
+++++SFG+L+ E+++ G PY + I YL + R +
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI----TVYLLQGRR---L 251
Query: 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+ P + + EV+ +C RP+ ++++ ++ + +
Sbjct: 252 LQPEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ +I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPEI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
++ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 QMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3LQ0|A Chain A, Zymogen Structure Of Crayfish Astacin Metallopeptidase
Length = 235
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 359 GLSGQLQKAFVTGVPKLN-----RLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVA 413
G+SG Q A ++G+ +L R T D+ I + SGC Y G +S ++++
Sbjct: 55 GVSGADQSAILSGMQELEEKTCIRFVPRTTESDYVEIFTSGSGCWSYVGRISGAQQVSLQ 114
Query: 414 ATA 416
A
Sbjct: 115 ANG 117
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 11/168 (6%)
Query: 460 NRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
N MV EY G +F HL E + A++ + + L ++ +L P
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 516 NLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILML 574
+ + I +TD +A +V + P+ ++ I +L + + ++ G+L+
Sbjct: 175 DQQGY-IQVTDFGFAKRVKGRTWXLCGTPEY-LAPAI---ILSKGYNKAVDWWALGVLIY 229
Query: 575 EIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
E+ +G P+ ++ + I EK + + P +FS + L++ Q +L
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 116/286 (40%), Gaps = 41/286 (14%)
Query: 387 FSNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
F+ +I +Y GTL + G +I A ++ D + + + + +H
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII--MKDFSHP 90
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY- 503
N ++L+G C E + ++V Y +G + I+ H N ++ ++G + LQ
Sbjct: 91 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF--IRNETH---NPTVKDLIG--FGLQVA 142
Query: 504 --MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA- 560
M + + H +L++ L + + KVA+ K S + P+
Sbjct: 143 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 202
Query: 561 -----------DPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCM 608
+++++SFG+L+ E+++ G PY + I YL + R +
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI----TVYLLQGRR---L 255
Query: 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+ P + + EV+ +C RP+ ++++ ++ + +
Sbjct: 256 LQPEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 21/22 (95%), Gaps = 1/22 (4%)
Query: 563 ETNIYSFGILMLEIIS-GKLPY 583
+++++SFGIL++EI++ G++PY
Sbjct: 349 KSDVWSFGILLMEIVTYGRIPY 370
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 21/22 (95%), Gaps = 1/22 (4%)
Query: 563 ETNIYSFGILMLEIIS-GKLPY 583
+++++SFGIL++EI++ G++PY
Sbjct: 192 KSDVWSFGILLMEIVTYGRIPY 213
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 21/22 (95%), Gaps = 1/22 (4%)
Query: 563 ETNIYSFGILMLEIIS-GKLPY 583
+++++SFGIL++EI++ G++PY
Sbjct: 365 KSDVWSFGILLMEIVTYGRIPY 386
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 26/200 (13%)
Query: 401 KGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460
KGT + ++SS+ + +E+ ++V+ L I H N + L E+ +
Sbjct: 34 KGTGKEYAAKFIKKRRLSSSRRGVSREEI--EREVNILREIRHPNIITLHDIFENKT--D 89
Query: 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSH 520
+++ E G +F+ L KE L + + + + Y+H + +AH +L
Sbjct: 90 VVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPE 144
Query: 521 CIYLTD-----------DY--AAKV-AEICFTTIALPKSKVSDDIENSVLPPLADPETNI 566
I L D D+ A K+ A F I V+ +I N PL E ++
Sbjct: 145 NIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN--YEPLG-LEADM 201
Query: 567 YSFGILMLEIISGKLPYCEE 586
+S G++ ++SG P+ E
Sbjct: 202 WSIGVITYILLSGASPFLGE 221
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 117/286 (40%), Gaps = 41/286 (14%)
Query: 387 FSNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
F+ +I +Y GTL + G +I A ++ D + + + + + +H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDFSHP 91
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY- 503
N ++L+G C E + ++V Y +G + I+ H N ++ ++G + LQ
Sbjct: 92 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF--IRNETH---NPTVKDLIG--FGLQVA 143
Query: 504 --MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA- 560
M + + H +L++ L + + KVA+ K S + P+
Sbjct: 144 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 561 -----------DPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCM 608
+++++SFG+L+ E+++ G PY + I YL + R +
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI----TVYLLQGRR---L 256
Query: 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+ P + + EV+ +C RP+ ++++ ++ + +
Sbjct: 257 LQPEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 26/200 (13%)
Query: 401 KGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460
KGT + ++SS+ + +E+ ++V+ L I H N + L E+ +
Sbjct: 27 KGTGKEYAAKFIKKRRLSSSRRGVSREEIE--REVNILREIRHPNIITLHDIFENKT--D 82
Query: 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSH 520
+++ E G +F+ L KE L + + + + Y+H + +AH +L
Sbjct: 83 VVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPE 137
Query: 521 CIYLTD-----------DY--AAKV-AEICFTTIALPKSKVSDDIENSVLPPLADPETNI 566
I L D D+ A K+ A F I V+ +I N PL E ++
Sbjct: 138 NIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN--YEPLG-LEADM 194
Query: 567 YSFGILMLEIISGKLPYCEE 586
+S G++ ++SG P+ E
Sbjct: 195 WSIGVITYILLSGASPFLGE 214
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 81/202 (40%), Gaps = 22/202 (10%)
Query: 399 IYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+Y+ L GV +A+ I D + K++D L ++NH N + +D
Sbjct: 48 VYRAACLLDGVPVALKKVQIFDLMDAKARADCI--KEIDLLKQLNHPNVIKYYASFIEDN 105
Query: 458 PFNRMMVFEYAPNGTVFEHL-HIKEMDHLDWNARM-RIIMGTAYCLQYMHHELNPPVAHS 515
N +V E A G + + H K+ L + + + L++MH V H
Sbjct: 106 ELN--IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHR 160
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPE----------TN 565
++ +++T K+ ++ K+ + + + P PE ++
Sbjct: 161 DIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGT--PYYMSPERIHENGYNFKSD 218
Query: 566 IYSFGILMLEIISGKLPYCEEK 587
I+S G L+ E+ + + P+ +K
Sbjct: 219 IWSLGCLLYEMAALQSPFYGDK 240
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 21/184 (11%)
Query: 358 TGLSGQLQKAFVTGVPKLNRLELDTACEDFSNII----DTQSGCTIYKGTLSSGVEIAVA 413
+G+ + + + + + D EDF II D G +YK +A A
Sbjct: 9 SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFG-KVYKAQNKETSVLAAA 67
Query: 414 ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIG--YCEDDEPFNRMMVFEYAPNG 471
T S++ L+ Y ++D L+ +H N V L+ Y E+ N ++ E+ G
Sbjct: 68 KVIDTKSEEELED----YMVEIDILASCDHPNIVKLLDAFYYEN----NLWILIEFCAGG 119
Query: 472 TVFEHLHIKEMDHLDWNARMRII-MGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAA 530
V + E++ ++++++ T L Y+H + + H +L + I T D
Sbjct: 120 AV--DAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDI 174
Query: 531 KVAE 534
K+A+
Sbjct: 175 KLAD 178
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 21/184 (11%)
Query: 358 TGLSGQLQKAFVTGVPKLNRLELDTACEDFSNII----DTQSGCTIYKGTLSSGVEIAVA 413
+G+ + + + + + D EDF II D G +YK +A A
Sbjct: 9 SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFG-KVYKAQNKETSVLAAA 67
Query: 414 ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIG--YCEDDEPFNRMMVFEYAPNG 471
T S++ L+ Y ++D L+ +H N V L+ Y E+ N ++ E+ G
Sbjct: 68 KVIDTKSEEELED----YMVEIDILASCDHPNIVKLLDAFYYEN----NLWILIEFCAGG 119
Query: 472 TVFEHLHIKEMDHLDWNARMRII-MGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAA 530
V + E++ ++++++ T L Y+H + + H +L + I T D
Sbjct: 120 AV--DAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDI 174
Query: 531 KVAE 534
K+A+
Sbjct: 175 KLAD 178
>pdb|3FLO|A Chain A, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
pdb|3FLO|C Chain C, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
pdb|3FLO|E Chain E, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
pdb|3FLO|G Chain G, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
Length = 460
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 12/74 (16%)
Query: 603 RNFSCMIDPSLKSFKQNELEAIC----------EVIKECIKTDLRQRPTMNDIIVQLRQV 652
RNF CM +PS SF+ NE+ C EVIK + + +++ I+Q R+
Sbjct: 268 RNFKCMANPS--SFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRY 325
Query: 653 INISPEQAVPRLSP 666
I P R+ P
Sbjct: 326 YPIFPGSIRTRIKP 339
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 21/184 (11%)
Query: 358 TGLSGQLQKAFVTGVPKLNRLELDTACEDFSNII----DTQSGCTIYKGTLSSGVEIAVA 413
+G+ + + + + + D EDF II D G +YK +A A
Sbjct: 9 SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFG-KVYKAQNKETSVLAAA 67
Query: 414 ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIG--YCEDDEPFNRMMVFEYAPNG 471
T S++ L+ Y ++D L+ +H N V L+ Y E+ N ++ E+ G
Sbjct: 68 KVIDTKSEEELED----YMVEIDILASCDHPNIVKLLDAFYYEN----NLWILIEFCAGG 119
Query: 472 TVFEHLHIKEMDHLDWNARMRII-MGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAA 530
V + E++ ++++++ T L Y+H + + H +L + I T D
Sbjct: 120 AV--DAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDI 174
Query: 531 KVAE 534
K+A+
Sbjct: 175 KLAD 178
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,327,002
Number of Sequences: 62578
Number of extensions: 755097
Number of successful extensions: 2358
Number of sequences better than 100.0: 392
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 324
Number of HSP's that attempted gapping in prelim test: 1975
Number of HSP's gapped (non-prelim): 436
length of query: 680
length of database: 14,973,337
effective HSP length: 105
effective length of query: 575
effective length of database: 8,402,647
effective search space: 4831522025
effective search space used: 4831522025
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)