Query 005734
Match_columns 680
No_of_seqs 512 out of 4966
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 05:57:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005734.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005734hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 3.6E-52 1.2E-56 432.9 10.9 255 379-655 22-307 (308)
2 4aoj_A High affinity nerve gro 100.0 7.6E-51 2.6E-55 426.8 19.8 248 387-657 45-322 (329)
3 4asz_A BDNF/NT-3 growth factor 100.0 2.6E-51 8.8E-56 424.6 15.5 249 387-658 17-293 (299)
4 3omv_A RAF proto-oncogene seri 100.0 2.7E-50 9.1E-55 417.1 18.9 251 386-656 39-302 (307)
5 3hmm_A TGF-beta receptor type- 100.0 1.3E-47 4.6E-52 399.0 17.4 252 388-655 8-298 (303)
6 4ase_A Vascular endothelial gr 100.0 7.7E-48 2.6E-52 407.3 12.1 258 379-657 60-350 (353)
7 4b9d_A Serine/threonine-protei 100.0 4.5E-46 1.5E-50 391.0 17.5 239 389-648 30-277 (350)
8 3fpq_A Serine/threonine-protei 100.0 9.6E-46 3.3E-50 380.2 19.4 244 387-647 30-282 (290)
9 4g3f_A NF-kappa-beta-inducing 100.0 1.1E-45 3.7E-50 386.3 17.4 240 388-655 63-317 (336)
10 4fih_A Serine/threonine-protei 100.0 2.6E-45 8.8E-50 384.6 18.2 236 389-648 80-324 (346)
11 4fie_A Serine/threonine-protei 100.0 4E-44 1.4E-48 384.7 19.7 236 389-648 157-401 (423)
12 3hyh_A Carbon catabolite-derep 100.0 6.4E-44 2.2E-48 363.5 19.5 237 388-648 18-263 (275)
13 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.9E-44 1.3E-48 370.2 16.0 236 388-646 37-283 (311)
14 3ubd_A Ribosomal protein S6 ki 100.0 7.6E-44 2.6E-48 367.9 10.3 231 388-642 29-271 (304)
15 4g31_A Eukaryotic translation 100.0 1.6E-42 5.4E-47 359.2 16.9 237 389-647 11-279 (299)
16 3uim_A Brassinosteroid insensi 100.0 3.2E-41 1.1E-45 355.3 15.9 275 371-652 16-309 (326)
17 2qkw_B Protein kinase; three-h 100.0 6.9E-41 2.4E-45 352.1 17.7 265 382-657 36-318 (321)
18 4b99_A Mitogen-activated prote 100.0 1.2E-40 4.2E-45 358.2 18.4 252 388-648 59-345 (398)
19 2nru_A Interleukin-1 receptor- 100.0 2.8E-39 9.6E-44 337.4 22.7 276 372-654 12-306 (307)
20 2psq_A Fibroblast growth facto 100.0 3.3E-39 1.1E-43 346.1 19.3 248 388-657 86-367 (370)
21 3v5w_A G-protein coupled recep 100.0 4.2E-39 1.4E-43 360.9 19.8 245 385-647 189-449 (689)
22 3p86_A Serine/threonine-protei 100.0 7E-39 2.4E-43 335.0 19.7 248 388-656 42-300 (309)
23 2qol_A Ephrin receptor; recept 100.0 3.2E-39 1.1E-43 346.6 17.0 244 388-654 50-309 (373)
24 3kul_A Ephrin type-A receptor 100.0 4.9E-39 1.7E-43 338.7 16.4 248 388-658 54-317 (325)
25 4f9c_A Cell division cycle 7-r 100.0 5.5E-39 1.9E-43 341.6 16.6 181 389-586 27-250 (361)
26 3cbl_A C-FES, proto-oncogene t 100.0 1.2E-39 3.9E-44 350.8 11.4 244 388-654 119-374 (377)
27 1qcf_A Haematopoetic cell kina 100.0 4E-39 1.4E-43 355.1 15.4 245 387-656 192-446 (454)
28 3uto_A Twitchin; kinase, muscl 100.0 2E-38 6.8E-43 357.4 21.2 240 388-648 162-411 (573)
29 2c30_A Serine/threonine-protei 100.0 4.3E-38 1.5E-42 330.9 22.1 252 373-648 23-295 (321)
30 3s95_A LIMK-1, LIM domain kina 100.0 1.6E-38 5.6E-43 332.2 18.6 240 388-655 15-283 (310)
31 1opk_A P150, C-ABL, proto-onco 100.0 1.3E-39 4.3E-44 362.7 10.6 245 386-654 223-478 (495)
32 3tt0_A Basic fibroblast growth 100.0 1.1E-38 3.7E-43 343.9 17.4 266 387-674 73-372 (382)
33 1k9a_A Carboxyl-terminal SRC k 100.0 9.5E-39 3.3E-43 351.6 17.3 243 388-655 198-446 (450)
34 4hcu_A Tyrosine-protein kinase 100.0 2.4E-38 8.2E-43 323.9 17.2 243 388-655 15-267 (269)
35 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.4E-39 1.8E-43 353.8 12.8 248 387-659 188-445 (452)
36 3poz_A Epidermal growth factor 100.0 1.7E-38 5.9E-43 334.8 14.9 242 389-654 21-278 (327)
37 3lb7_A RAF proto-oncogene seri 100.0 1.3E-37 4.6E-42 325.0 21.1 250 387-657 40-303 (307)
38 3soc_A Activin receptor type-2 100.0 8.9E-38 3E-42 328.6 19.5 252 388-655 29-319 (322)
39 3ugc_A Tyrosine-protein kinase 100.0 1.3E-38 4.4E-43 330.5 11.5 250 388-655 15-292 (295)
40 1luf_A Muscle-specific tyrosin 100.0 3.6E-38 1.2E-42 334.2 15.2 247 388-656 52-337 (343)
41 2eva_A TAK1 kinase - TAB1 chim 100.0 3.3E-37 1.1E-41 322.1 22.2 249 388-659 13-268 (307)
42 3fxz_A Serine/threonine-protei 100.0 1.7E-37 5.8E-42 322.7 19.9 235 389-647 26-269 (297)
43 3c1x_A Hepatocyte growth facto 100.0 3.7E-38 1.3E-42 338.1 15.2 252 388-661 94-362 (373)
44 3kmu_A ILK, integrin-linked ki 100.0 5.7E-38 1.9E-42 320.8 15.7 250 388-654 15-270 (271)
45 3gen_A Tyrosine-protein kinase 100.0 8.5E-38 2.9E-42 322.2 17.1 243 388-655 29-281 (283)
46 3l9p_A Anaplastic lymphoma kin 100.0 1.8E-38 6.3E-43 340.1 12.5 246 388-655 76-346 (367)
47 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.5E-38 1.2E-42 322.4 14.0 243 388-655 13-265 (268)
48 3kfa_A Tyrosine-protein kinase 100.0 2.6E-38 9E-43 326.7 12.2 245 387-655 17-272 (288)
49 4f0f_A Serine/threonine-protei 100.0 5.5E-37 1.9E-41 316.8 22.1 247 388-652 24-287 (287)
50 3q4u_A Activin receptor type-1 100.0 8.7E-38 3E-42 324.9 16.1 244 388-652 13-300 (301)
51 3vhe_A Vascular endothelial gr 100.0 5.8E-38 2E-42 334.9 15.1 251 384-655 21-356 (359)
52 3fe3_A MAP/microtubule affinit 100.0 2.9E-37 9.9E-42 325.3 19.7 236 389-648 21-265 (328)
53 2ivs_A Proto-oncogene tyrosine 100.0 2E-37 7E-42 324.1 18.2 245 388-654 28-311 (314)
54 2h8h_A Proto-oncogene tyrosine 100.0 2.7E-38 9.1E-43 355.3 12.0 246 387-657 271-526 (535)
55 3qup_A Tyrosine-protein kinase 100.0 6.8E-38 2.3E-42 329.4 14.2 254 388-660 28-304 (323)
56 1qpc_A LCK kinase; alpha beta 100.0 4.4E-38 1.5E-42 323.6 11.9 247 388-659 18-274 (279)
57 4eqm_A Protein kinase; transfe 100.0 5.9E-37 2E-41 318.1 19.9 251 388-656 16-277 (294)
58 2ozo_A Tyrosine-protein kinase 100.0 1.2E-37 4.2E-42 355.0 16.2 240 390-653 343-597 (613)
59 2pvf_A Fibroblast growth facto 100.0 4.5E-37 1.5E-41 324.9 18.7 249 388-658 40-322 (334)
60 3op5_A Serine/threonine-protei 100.0 1.3E-37 4.6E-42 333.0 14.5 259 388-655 40-330 (364)
61 3zgw_A Maternal embryonic leuc 100.0 4.8E-37 1.6E-41 325.8 18.6 236 388-648 15-261 (347)
62 1mp8_A Focal adhesion kinase 1 100.0 2E-37 6.8E-42 319.3 14.9 243 388-654 20-276 (281)
63 3pls_A Macrophage-stimulating 100.0 4.8E-37 1.6E-41 318.8 17.7 254 389-664 27-297 (298)
64 3niz_A Rhodanese family protei 100.0 7.1E-37 2.4E-41 320.2 18.8 249 389-647 27-300 (311)
65 1t46_A HOMO sapiens V-KIT hard 100.0 3.6E-37 1.2E-41 322.0 16.5 249 387-657 27-310 (313)
66 1rjb_A FL cytokine receptor; k 100.0 2.4E-37 8.1E-42 328.3 15.1 250 388-659 50-339 (344)
67 1mqb_A Ephrin type-A receptor 100.0 7.8E-37 2.7E-41 323.0 18.9 246 388-656 49-311 (333)
68 3f66_A Hepatocyte growth facto 100.0 5.5E-37 1.9E-41 318.6 17.5 249 388-658 30-295 (298)
69 3t9t_A Tyrosine-protein kinase 100.0 2.9E-37 1E-41 315.1 15.1 243 388-655 13-265 (267)
70 4euu_A Serine/threonine-protei 100.0 4.3E-36 1.5E-40 315.2 24.3 259 388-653 14-308 (319)
71 3brb_A Proto-oncogene tyrosine 100.0 5.1E-37 1.8E-41 321.2 17.2 252 388-658 39-312 (313)
72 3dtc_A Mitogen-activated prote 100.0 1.8E-37 6.3E-42 317.4 13.4 246 388-652 12-271 (271)
73 2izr_A Casein kinase I isoform 100.0 3.9E-37 1.3E-41 324.8 16.0 246 388-654 14-281 (330)
74 2x4f_A Myosin light chain kina 100.0 1.2E-36 4.2E-41 326.3 20.0 238 389-647 95-342 (373)
75 1tki_A Titin; serine kinase, m 100.0 1.2E-36 4.1E-41 319.8 19.4 239 388-648 10-258 (321)
76 3og7_A AKAP9-BRAF fusion prote 100.0 6.4E-37 2.2E-41 316.9 16.7 246 388-654 29-288 (289)
77 1o6l_A RAC-beta serine/threoni 100.0 2.6E-36 8.8E-41 319.1 21.5 237 389-648 11-261 (337)
78 4fl3_A Tyrosine-protein kinase 100.0 2.1E-37 7.2E-42 354.0 14.2 241 389-653 375-630 (635)
79 3kex_A Receptor tyrosine-prote 100.0 1.8E-37 6.1E-42 326.7 12.6 242 389-654 19-276 (325)
80 1u59_A Tyrosine-protein kinase 100.0 6.3E-37 2.1E-41 316.5 16.3 242 389-654 16-272 (287)
81 2zv2_A Calcium/calmodulin-depe 100.0 1.9E-36 6.6E-41 314.6 19.9 242 388-647 18-292 (298)
82 1csn_A Casein kinase-1; phosph 100.0 1.2E-36 4E-41 315.8 17.4 249 388-656 15-285 (298)
83 2h34_A Serine/threonine-protei 100.0 1.8E-36 6.3E-41 316.7 19.0 251 388-658 39-300 (309)
84 1byg_A CSK, protein (C-termina 100.0 2.6E-37 9E-42 317.7 12.3 243 388-655 26-274 (278)
85 4fr4_A YANK1, serine/threonine 100.0 3.5E-36 1.2E-40 323.1 21.5 240 388-647 20-271 (384)
86 3lzb_A Epidermal growth factor 100.0 3.3E-37 1.1E-41 325.1 13.2 243 389-655 21-279 (327)
87 2y0a_A Death-associated protei 100.0 2.6E-36 8.8E-41 318.1 19.9 243 388-647 16-271 (326)
88 3qd2_B Eukaryotic translation 100.0 2.3E-36 8E-41 318.3 19.5 237 389-647 12-325 (332)
89 3c0i_A Peripheral plasma membr 100.0 7.9E-37 2.7E-41 325.4 15.7 245 388-648 29-287 (351)
90 1xbb_A Tyrosine-protein kinase 100.0 6.5E-37 2.2E-41 317.1 14.5 241 390-654 24-279 (291)
91 1fot_A TPK1 delta, CAMP-depend 100.0 4.4E-36 1.5E-40 314.9 20.8 237 389-648 12-259 (318)
92 2buj_A Serine/threonine-protei 100.0 3.5E-36 1.2E-40 315.4 20.0 253 388-661 34-313 (317)
93 2yab_A Death-associated protei 100.0 3.1E-36 1.1E-40 321.4 19.8 243 388-647 17-272 (361)
94 3tki_A Serine/threonine-protei 100.0 2.3E-36 8E-41 317.9 18.4 238 389-648 13-262 (323)
95 3cc6_A Protein tyrosine kinase 100.0 1.3E-36 4.5E-41 313.1 16.1 244 388-655 17-274 (281)
96 3lxl_A Tyrosine-protein kinase 100.0 4E-37 1.4E-41 324.3 12.4 254 388-659 28-308 (327)
97 3hko_A Calcium/calmodulin-depe 100.0 2.6E-36 8.8E-41 320.3 18.7 251 383-648 24-331 (345)
98 3lxp_A Non-receptor tyrosine-p 100.0 7E-37 2.4E-41 321.2 14.2 250 388-656 36-312 (318)
99 2bdw_A Hypothetical protein K1 100.0 5.6E-36 1.9E-40 320.0 21.1 241 388-648 34-285 (362)
100 1ob3_A PFPK5, cell division co 100.0 1.7E-36 5.8E-41 313.5 16.5 249 389-647 8-280 (288)
101 3soa_A Calcium/calmodulin-depe 100.0 9.5E-36 3.3E-40 326.1 23.3 241 388-648 16-268 (444)
102 3g33_A Cell division protein k 100.0 1.2E-36 4.1E-41 317.8 15.3 256 388-647 14-296 (308)
103 3mdy_A Bone morphogenetic prot 100.0 7.5E-36 2.6E-40 315.4 21.5 252 388-656 42-333 (337)
104 1u5q_A Serine/threonine protei 100.0 2.6E-36 9E-41 320.8 18.0 241 389-650 60-308 (348)
105 2wqm_A Serine/threonine-protei 100.0 7E-36 2.4E-40 312.2 20.8 254 388-658 37-301 (310)
106 2i1m_A Macrophage colony-stimu 100.0 5.4E-37 1.9E-41 324.0 12.4 245 388-654 51-326 (333)
107 3gni_B Strad alpha; kinase fol 100.0 2.4E-36 8.2E-41 326.3 17.6 253 388-648 30-334 (389)
108 3ork_A Serine/threonine protei 100.0 1.5E-36 5.1E-41 317.6 15.5 255 388-659 17-286 (311)
109 1kob_A Twitchin; kinase, intra 100.0 7.4E-36 2.5E-40 321.4 21.2 240 388-648 56-305 (387)
110 4fvq_A Tyrosine-protein kinase 100.0 3.2E-37 1.1E-41 318.8 10.2 241 388-654 13-275 (289)
111 3fdn_A Serine/threonine-protei 100.0 3.5E-36 1.2E-40 309.5 17.8 237 389-648 15-258 (279)
112 1p4o_A Insulin-like growth fac 100.0 7E-37 2.4E-41 321.4 12.5 245 388-654 30-299 (322)
113 3kn6_A Ribosomal protein S6 ki 100.0 3.3E-36 1.1E-40 317.0 17.4 238 389-648 17-271 (325)
114 1rdq_E PKA C-alpha, CAMP-depen 100.0 6E-36 2.1E-40 318.1 19.3 237 389-648 47-294 (350)
115 2yfx_A Tyrosine-protein kinase 100.0 1.8E-36 6.3E-41 319.2 15.1 245 388-654 35-304 (327)
116 4e5w_A Tyrosine-protein kinase 100.0 1.6E-36 5.4E-41 315.7 14.4 249 388-653 26-301 (302)
117 2pmi_A Negative RE, cyclin-dep 100.0 3.4E-36 1.2E-40 315.8 17.1 249 389-647 11-293 (317)
118 2w5a_A Serine/threonine-protei 100.0 1.4E-36 4.8E-41 312.3 13.7 246 389-650 12-270 (279)
119 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.2E-36 4.1E-41 321.4 13.5 237 388-648 14-259 (336)
120 4eut_A Serine/threonine-protei 100.0 3.4E-36 1.2E-40 325.9 17.3 260 388-654 14-309 (396)
121 2w4o_A Calcium/calmodulin-depe 100.0 6.8E-36 2.3E-40 317.9 19.1 237 388-647 58-305 (349)
122 4dc2_A Protein kinase C IOTA t 100.0 9.7E-36 3.3E-40 320.8 20.1 234 389-642 58-307 (396)
123 3llt_A Serine/threonine kinase 100.0 1.4E-35 4.8E-40 316.7 20.8 247 389-647 41-355 (360)
124 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.4E-36 8.1E-41 321.5 14.6 237 388-647 28-280 (353)
125 1fvr_A Tyrosine-protein kinase 100.0 2.2E-36 7.7E-41 318.5 14.3 247 388-656 30-302 (327)
126 2jii_A Serine/threonine-protei 100.0 3.7E-36 1.2E-40 320.4 16.1 249 388-656 47-338 (352)
127 2xir_A Vascular endothelial gr 100.0 3.7E-36 1.3E-40 314.8 15.8 246 389-655 33-311 (316)
128 1xjd_A Protein kinase C, theta 100.0 3.4E-36 1.2E-40 319.1 15.7 239 385-646 17-268 (345)
129 2w1i_A JAK2; chromosomal rearr 100.0 2.3E-36 7.8E-41 318.4 14.1 249 388-654 46-322 (326)
130 2a19_B Interferon-induced, dou 100.0 4.7E-36 1.6E-40 308.9 16.0 239 388-656 16-276 (284)
131 2v62_A Serine/threonine-protei 100.0 7.2E-36 2.5E-40 317.2 17.8 256 388-654 42-328 (345)
132 3a62_A Ribosomal protein S6 ki 100.0 1.1E-35 3.7E-40 313.4 18.7 239 388-648 22-277 (327)
133 3o0g_A Cell division protein k 100.0 1.2E-35 4E-40 307.8 18.7 249 389-647 8-282 (292)
134 2y94_A 5'-AMP-activated protei 100.0 1E-35 3.5E-40 328.1 19.3 238 388-648 21-267 (476)
135 2eue_A Carbon catabolite derep 100.0 9.9E-36 3.4E-40 305.5 17.7 236 388-647 18-262 (275)
136 3p1a_A MYT1 kinase, membrane-a 100.0 1.2E-35 4.3E-40 310.7 18.7 234 388-647 62-304 (311)
137 3cok_A Serine/threonine-protei 100.0 6.8E-36 2.3E-40 307.1 16.2 238 388-647 16-262 (278)
138 4aw2_A Serine/threonine-protei 100.0 1.1E-36 3.8E-41 332.4 10.9 253 379-648 68-339 (437)
139 3gxj_A TGF-beta receptor type- 100.0 9.6E-38 3.3E-42 324.7 2.3 248 388-656 8-299 (303)
140 3ll6_A Cyclin G-associated kin 100.0 7.9E-36 2.7E-40 315.0 16.8 248 388-658 33-312 (337)
141 3kk8_A Calcium/calmodulin depe 100.0 3.3E-35 1.1E-39 302.9 20.8 240 389-648 12-262 (284)
142 1cm8_A Phosphorylated MAP kina 100.0 2.3E-35 7.9E-40 315.9 20.3 250 389-648 31-308 (367)
143 3is5_A Calcium-dependent prote 100.0 2.1E-35 7E-40 305.0 19.2 240 387-647 26-278 (285)
144 3a8x_A Protein kinase C IOTA t 100.0 2.8E-35 9.6E-40 312.4 20.7 235 388-642 14-264 (345)
145 1nxk_A MAP kinase-activated pr 100.0 1.1E-35 3.9E-40 321.9 17.8 237 389-648 68-322 (400)
146 4agu_A Cyclin-dependent kinase 100.0 2.5E-35 8.5E-40 308.0 19.7 250 389-648 9-285 (311)
147 2ac3_A MAP kinase-interacting 100.0 1E-35 3.5E-40 311.7 16.7 240 389-647 19-295 (316)
148 2rku_A Serine/threonine-protei 100.0 2.5E-35 8.4E-40 305.6 19.5 238 388-648 20-266 (294)
149 2y7j_A Phosphorylase B kinase 100.0 4.2E-35 1.4E-39 313.7 21.8 242 389-647 100-359 (365)
150 3oz6_A Mitogen-activated prote 100.0 3E-35 1E-39 317.6 20.7 250 389-648 15-329 (388)
151 2a2a_A Death-associated protei 100.0 2.2E-35 7.5E-40 310.2 19.0 244 387-647 16-272 (321)
152 2r5t_A Serine/threonine-protei 100.0 1.3E-35 4.5E-40 317.9 17.5 240 388-650 43-292 (373)
153 1t4h_A Serine/threonine-protei 100.0 3.8E-35 1.3E-39 303.6 20.3 242 388-647 31-282 (290)
154 3v8s_A RHO-associated protein 100.0 2.1E-36 7.2E-41 327.7 11.3 246 383-648 67-330 (410)
155 2vd5_A DMPK protein; serine/th 100.0 2.3E-36 7.9E-41 327.6 11.6 248 383-648 59-328 (412)
156 4hgt_A Casein kinase I isoform 100.0 3.7E-36 1.3E-40 311.7 12.5 246 388-656 14-282 (296)
157 4ejn_A RAC-alpha serine/threon 100.0 6.1E-36 2.1E-40 329.0 14.9 236 389-647 154-404 (446)
158 2acx_A G protein-coupled recep 100.0 1.2E-35 4.1E-40 332.2 17.5 242 389-648 190-445 (576)
159 1ua2_A CAK, cell division prot 100.0 1.1E-35 3.7E-40 316.0 16.0 253 389-648 16-292 (346)
160 3uc3_A Serine/threonine-protei 100.0 2.5E-35 8.7E-40 314.9 19.0 239 388-648 25-275 (361)
161 2yex_A Serine/threonine-protei 100.0 5.7E-35 1.9E-39 299.6 20.8 238 388-647 12-261 (276)
162 2clq_A Mitogen-activated prote 100.0 2.6E-35 9.1E-40 305.2 18.4 238 389-647 28-278 (295)
163 3f3z_A Calcium/calmodulin-depe 100.0 4.8E-35 1.7E-39 300.6 20.1 238 388-647 14-261 (277)
164 1b6c_B TGF-B superfamily recep 100.0 3.6E-35 1.2E-39 311.0 19.5 249 387-656 46-338 (342)
165 3g2f_A Bone morphogenetic prot 100.0 3E-35 1E-39 310.9 18.6 256 388-657 18-321 (336)
166 3uzp_A CKI-delta, CKID, casein 100.0 5.8E-36 2E-40 310.3 12.8 246 388-656 14-282 (296)
167 3uqc_A Probable conserved tran 100.0 8.1E-36 2.8E-40 308.2 13.9 232 388-657 36-268 (286)
168 3bhy_A Death-associated protei 100.0 3.2E-35 1.1E-39 302.7 18.3 249 388-653 10-273 (283)
169 2r3i_A Cell division protein k 100.0 1.5E-35 5.1E-40 307.8 15.9 250 389-647 9-283 (299)
170 2jam_A Calcium/calmodulin-depe 100.0 7.3E-35 2.5E-39 303.6 21.1 239 388-648 14-262 (304)
171 3lm5_A Serine/threonine-protei 100.0 3.1E-35 1.1E-39 309.9 18.3 242 389-648 35-288 (327)
172 2i0e_A Protein kinase C-beta I 100.0 2.5E-35 8.4E-40 313.5 17.7 237 388-647 25-276 (353)
173 2vgo_A Serine/threonine-protei 100.0 3.7E-35 1.3E-39 302.6 18.5 238 388-648 19-263 (284)
174 2owb_A Serine/threonine-protei 100.0 3.1E-35 1.1E-39 311.0 18.2 238 388-648 46-292 (335)
175 2zmd_A Dual specificity protei 100.0 4.3E-35 1.5E-39 316.4 19.5 237 389-648 62-321 (390)
176 1u46_A ACK-1, activated CDC42 100.0 5.7E-36 2E-40 309.5 11.9 248 388-656 23-286 (291)
177 3ttj_A Mitogen-activated prote 100.0 3.6E-35 1.2E-39 323.9 19.0 249 389-648 68-356 (464)
178 3byv_A Rhoptry kinase; malaria 100.0 9.8E-37 3.4E-41 327.9 6.3 235 389-647 79-359 (377)
179 3dbq_A Dual specificity protei 100.0 6.2E-35 2.1E-39 309.7 19.8 238 388-648 14-274 (343)
180 2h6d_A 5'-AMP-activated protei 100.0 3.2E-35 1.1E-39 301.6 17.0 238 388-648 16-262 (276)
181 1x8b_A WEE1HU, WEE1-like prote 100.0 1.2E-35 4.1E-40 306.2 13.6 235 389-647 17-279 (289)
182 3pg1_A Mitogen-activated prote 100.0 2.3E-35 8E-40 315.2 16.3 266 378-648 15-317 (362)
183 3a7i_A MST3 kinase, serine/thr 100.0 3.1E-35 1.1E-39 306.2 16.8 237 389-650 28-273 (303)
184 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.2E-35 7.5E-40 311.4 15.9 248 389-647 40-318 (329)
185 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.6E-35 8.9E-40 315.4 16.6 239 389-658 71-343 (365)
186 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.4E-35 1.9E-39 326.1 19.8 236 389-642 191-438 (543)
187 2pml_X PFPK7, Ser/Thr protein 100.0 3.8E-35 1.3E-39 311.7 17.4 251 388-647 36-322 (348)
188 2qr7_A Ribosomal protein S6 ki 100.0 1.5E-35 5.1E-40 314.1 14.0 238 388-648 27-278 (342)
189 3dls_A PAS domain-containing s 100.0 9.6E-36 3.3E-40 314.8 12.3 233 389-648 30-275 (335)
190 2wtk_C Serine/threonine-protei 100.0 8E-35 2.7E-39 303.2 18.9 242 388-648 10-264 (305)
191 4aaa_A Cyclin-dependent kinase 100.0 3.3E-35 1.1E-39 310.2 16.0 249 389-647 31-306 (331)
192 3mtl_A Cell division protein k 100.0 7.1E-36 2.4E-40 314.4 10.7 249 389-648 8-282 (324)
193 3com_A Serine/threonine-protei 100.0 1.5E-34 5E-39 302.6 20.2 236 388-647 34-278 (314)
194 2j0j_A Focal adhesion kinase 1 100.0 3.1E-35 1E-39 337.4 16.3 243 388-654 395-651 (656)
195 2vwi_A Serine/threonine-protei 100.0 2.3E-35 7.7E-40 306.8 13.7 246 388-647 20-287 (303)
196 2j7t_A Serine/threonine-protei 100.0 4.9E-35 1.7E-39 304.4 16.2 238 388-647 24-275 (302)
197 3eqc_A Dual specificity mitoge 100.0 3.3E-35 1.1E-39 313.8 15.4 250 389-648 39-325 (360)
198 3kvw_A DYRK2, dual specificity 100.0 1E-34 3.6E-39 317.3 19.6 248 388-647 102-408 (429)
199 3i6u_A CDS1, serine/threonine- 100.0 8.2E-35 2.8E-39 317.2 18.6 242 388-647 140-399 (419)
200 2fst_X Mitogen-activated prote 100.0 3.5E-35 1.2E-39 314.3 15.0 250 389-648 35-312 (367)
201 3sv0_A Casein kinase I-like; t 100.0 4.6E-35 1.6E-39 323.4 16.3 247 388-654 12-278 (483)
202 1phk_A Phosphorylase kinase; g 100.0 2.4E-34 8.3E-39 298.5 20.4 242 389-647 23-283 (298)
203 3m2w_A MAP kinase-activated pr 100.0 8.2E-35 2.8E-39 302.6 16.5 221 389-648 24-257 (299)
204 1blx_A Cyclin-dependent kinase 100.0 9.3E-35 3.2E-39 305.7 17.1 252 389-647 17-296 (326)
205 3nsz_A CK II alpha, casein kin 100.0 6.6E-35 2.3E-39 307.5 15.9 243 389-647 42-319 (330)
206 3rp9_A Mitogen-activated prote 100.0 1.7E-34 5.7E-39 318.8 19.5 252 388-648 58-397 (458)
207 3fme_A Dual specificity mitoge 100.0 1.4E-34 4.9E-39 298.9 17.7 240 389-647 13-266 (290)
208 3eb0_A Putative uncharacterize 100.0 7E-35 2.4E-39 314.2 15.7 252 384-648 6-322 (383)
209 3coi_A Mitogen-activated prote 100.0 2E-34 6.8E-39 307.1 18.7 250 388-648 29-306 (353)
210 4exu_A Mitogen-activated prote 100.0 1E-34 3.4E-39 311.5 16.2 250 388-648 47-324 (371)
211 2xrw_A Mitogen-activated prote 100.0 2.2E-34 7.5E-39 308.9 18.6 249 389-648 31-319 (371)
212 2x7f_A TRAF2 and NCK-interacti 100.0 1.3E-34 4.4E-39 304.7 16.4 239 389-648 30-287 (326)
213 1vzo_A Ribosomal protein S6 ki 100.0 3.5E-35 1.2E-39 313.2 12.2 242 388-648 59-322 (355)
214 3nyv_A Calmodulin-domain prote 100.0 1.5E-34 5.2E-39 321.4 17.7 242 388-648 31-282 (484)
215 3lij_A Calcium/calmodulin depe 100.0 5.2E-34 1.8E-38 317.8 22.0 241 388-648 42-292 (494)
216 3mi9_A Cell division protein k 100.0 1.9E-34 6.3E-39 307.0 17.5 252 389-648 23-312 (351)
217 3mwu_A Calmodulin-domain prote 100.0 3.6E-34 1.2E-38 318.4 20.2 240 388-648 27-277 (486)
218 3q60_A ROP5B; pseudokinase, tr 100.0 2E-35 6.8E-40 317.0 9.6 246 388-647 67-352 (371)
219 3an0_A Dual specificity mitoge 100.0 2.7E-34 9.4E-39 304.2 18.1 240 389-648 57-311 (340)
220 3pfq_A PKC-B, PKC-beta, protei 100.0 3E-34 1E-38 330.2 19.4 236 389-647 347-597 (674)
221 1z57_A Dual specificity protei 100.0 3.3E-34 1.1E-38 302.7 18.2 248 388-647 19-328 (339)
222 2ycf_A Serine/threonine-protei 100.0 6.1E-34 2.1E-38 299.3 20.1 242 388-647 15-274 (322)
223 2b9h_A MAP kinase FUS3, mitoge 100.0 1.3E-34 4.6E-39 308.1 15.2 255 388-653 16-313 (353)
224 2y4i_B KSR2, HKSR2, kinase sup 100.0 4E-35 1.4E-39 307.5 10.7 245 388-656 38-304 (319)
225 3rgf_A Cyclin-dependent kinase 100.0 2.3E-34 7.9E-39 312.5 16.9 249 389-648 27-334 (405)
226 2i6l_A Mitogen-activated prote 100.0 3.7E-34 1.3E-38 299.9 17.8 248 389-648 17-306 (320)
227 3q5i_A Protein kinase; CDPK, m 100.0 8.3E-34 2.8E-38 316.9 21.8 243 389-648 42-302 (504)
228 3n9x_A Phosphotransferase; mal 100.0 4.6E-34 1.6E-38 312.7 19.2 187 388-583 31-252 (432)
229 1zy4_A Serine/threonine-protei 100.0 8.7E-34 3E-38 294.5 19.4 237 389-647 12-283 (303)
230 1wak_A Serine/threonine-protei 100.0 3.2E-34 1.1E-38 309.9 16.6 251 388-647 42-391 (397)
231 3qyz_A Mitogen-activated prote 100.0 3.5E-34 1.2E-38 306.5 16.7 249 389-648 33-314 (364)
232 2vx3_A Dual specificity tyrosi 100.0 7.2E-34 2.5E-38 306.1 19.1 249 389-647 60-372 (382)
233 3e3p_A Protein kinase, putativ 100.0 4.1E-34 1.4E-38 305.2 16.8 264 380-653 18-322 (360)
234 1j1b_A Glycogen synthase kinas 100.0 5E-34 1.7E-38 311.1 17.5 253 388-653 59-344 (420)
235 2wei_A Calmodulin-domain prote 100.0 1.4E-33 4.6E-38 291.5 18.8 239 388-647 27-276 (287)
236 3cek_A Dual specificity protei 100.0 1.1E-33 3.8E-38 295.9 17.7 237 389-648 34-293 (313)
237 4e7w_A Glycogen synthase kinas 100.0 2.4E-34 8.1E-39 311.1 12.7 254 388-653 45-329 (394)
238 3fhr_A MAP kinase-activated pr 100.0 8E-34 2.7E-38 300.3 15.1 242 389-648 35-288 (336)
239 2eu9_A Dual specificity protei 100.0 2.2E-33 7.5E-38 298.5 18.4 248 388-647 24-333 (355)
240 2dyl_A Dual specificity mitoge 100.0 2.9E-33 9.8E-38 293.1 18.0 240 389-648 31-284 (318)
241 2rio_A Serine/threonine-protei 100.0 1.6E-33 5.6E-38 308.4 16.1 236 389-647 21-295 (434)
242 3aln_A Dual specificity mitoge 100.0 1.8E-33 6.2E-38 296.2 15.0 242 389-648 28-286 (327)
243 1q8y_A SR protein kinase; tran 100.0 2.5E-33 8.7E-38 300.4 14.6 252 388-648 24-334 (373)
244 2iwi_A Serine/threonine-protei 100.0 1.7E-33 5.8E-38 294.3 10.9 234 388-648 36-284 (312)
245 3a99_A Proto-oncogene serine/t 100.0 1.2E-33 4.2E-38 296.8 9.2 233 388-647 48-293 (320)
246 3p23_A Serine/threonine-protei 100.0 4.2E-33 1.4E-37 304.5 13.5 233 389-647 30-283 (432)
247 3qa8_A MGC80376 protein; kinas 100.0 8.2E-33 2.8E-37 312.4 14.3 259 388-655 19-310 (676)
248 2pzi_A Probable serine/threoni 100.0 2E-32 6.9E-37 316.6 14.7 232 388-652 85-326 (681)
249 3dzo_A Rhoptry kinase domain; 100.0 1.5E-32 5.3E-37 298.7 8.4 236 388-647 83-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 5.8E-31 2E-35 278.2 5.3 238 388-646 25-329 (336)
251 1ogq_A PGIP-2, polygalacturona 99.9 4E-26 1.4E-30 238.7 12.8 156 27-185 3-167 (313)
252 4azs_A Methyltransferase WBDD; 99.9 1.6E-25 5.5E-30 252.1 7.7 183 389-582 240-437 (569)
253 3rgz_A Protein brassinosteroid 99.9 2.3E-24 8E-29 252.7 14.6 244 22-274 4-287 (768)
254 4ecn_A Leucine-rich repeat pro 99.9 3.3E-23 1.1E-27 242.6 11.1 152 28-185 267-535 (876)
255 4eco_A Uncharacterized protein 99.9 5.1E-23 1.8E-27 236.0 12.3 194 29-225 29-350 (636)
256 3en9_A Glycoprotease, O-sialog 99.9 4.3E-23 1.5E-27 231.1 7.6 179 388-584 341-539 (540)
257 4fcg_A Uncharacterized protein 99.9 6.7E-23 2.3E-27 215.6 7.0 198 24-225 21-250 (328)
258 1zar_A RIO2 kinase; serine kin 99.8 3.2E-20 1.1E-24 190.5 13.2 134 389-541 96-242 (282)
259 3rgz_A Protein brassinosteroid 99.8 1.2E-18 4.2E-23 204.1 13.7 115 71-185 442-556 (768)
260 1zth_A RIO1 serine protein kin 99.8 1.9E-18 6.5E-23 175.0 11.1 138 388-541 52-219 (258)
261 3e6j_A Variable lymphocyte rec 99.7 2.1E-17 7.1E-22 164.3 15.4 150 58-221 16-176 (229)
262 3m19_A Variable lymphocyte rec 99.7 1.2E-17 4.1E-22 168.4 13.5 141 72-225 36-176 (251)
263 2o6s_A Variable lymphocyte rec 99.7 6.4E-17 2.2E-21 158.1 15.5 150 59-221 5-165 (208)
264 2v70_A SLIT-2, SLIT homolog 2 99.7 5.4E-17 1.8E-21 160.2 13.7 150 59-221 9-170 (220)
265 2o6q_A Variable lymphocyte rec 99.7 1.3E-16 4.6E-21 162.5 16.7 147 59-221 3-150 (270)
266 2v9t_B SLIT homolog 2 protein 99.7 7.5E-17 2.6E-21 159.2 14.0 147 59-218 9-166 (220)
267 1ogq_A PGIP-2, polygalacturona 99.7 1.4E-17 4.7E-22 173.8 8.9 199 70-275 75-287 (313)
268 2z62_A TOLL-like receptor 4, v 99.7 8.6E-16 3E-20 156.9 15.5 182 71-269 28-213 (276)
269 1w8a_A SLIT protein; signaling 99.7 4.2E-16 1.4E-20 150.3 12.2 132 75-222 12-144 (192)
270 3rfs_A Internalin B, repeat mo 99.6 4.8E-16 1.6E-20 158.6 12.5 141 70-225 62-202 (272)
271 4b8c_D Glucose-repressible alc 99.6 1.8E-16 6.3E-21 183.6 8.9 201 28-250 130-357 (727)
272 4fcg_A Uncharacterized protein 99.6 5E-16 1.7E-20 163.0 11.0 152 71-225 104-274 (328)
273 2xot_A Amphoterin-induced prot 99.6 1.3E-15 4.6E-20 162.0 14.2 157 59-225 16-184 (361)
274 4g8a_A TOLL-like receptor 4; l 99.6 1.1E-15 3.6E-20 174.7 14.1 142 71-225 52-194 (635)
275 3v47_A TOLL-like receptor 5B a 99.6 5E-16 1.7E-20 170.5 10.6 154 60-225 7-175 (455)
276 2z66_A Variable lymphocyte rec 99.6 1.2E-15 4.3E-20 158.2 12.7 207 59-272 5-239 (306)
277 1ozn_A Reticulon 4 receptor; N 99.6 2.4E-15 8.1E-20 154.5 14.3 142 71-225 32-174 (285)
278 2o6r_A Variable lymphocyte rec 99.6 2.1E-15 7.3E-20 143.2 12.9 137 59-221 5-141 (177)
279 2z81_A CD282 antigen, TOLL-lik 99.6 6.1E-16 2.1E-20 174.0 10.0 153 60-225 3-169 (549)
280 3vq2_A TLR4, TOLL-like recepto 99.6 2E-15 6.7E-20 172.0 14.1 142 71-225 32-174 (606)
281 3zyj_A Leucine-rich repeat-con 99.6 3.8E-15 1.3E-19 162.9 15.8 162 63-225 45-228 (440)
282 3m19_A Variable lymphocyte rec 99.6 4.7E-15 1.6E-19 149.3 14.6 139 70-221 58-196 (251)
283 1w8a_A SLIT protein; signaling 99.6 4.6E-15 1.6E-19 143.0 13.1 127 59-185 6-144 (192)
284 4ecn_A Leucine-rich repeat pro 99.6 9E-16 3.1E-20 179.8 9.2 183 70-275 447-663 (876)
285 2id5_A Lingo-1, leucine rich r 99.6 3.7E-15 1.3E-19 164.7 13.2 151 62-225 12-173 (477)
286 3rfs_A Internalin B, repeat mo 99.6 8.6E-15 2.9E-19 149.3 14.7 139 70-221 84-222 (272)
287 1ozn_A Reticulon 4 receptor; N 99.6 5.6E-15 1.9E-19 151.7 13.3 143 70-225 55-198 (285)
288 1wwl_A Monocyte differentiatio 99.6 8.5E-16 2.9E-20 160.1 7.1 108 73-181 65-187 (312)
289 3zyi_A Leucine-rich repeat-con 99.6 8.5E-15 2.9E-19 160.7 15.5 162 63-225 56-239 (452)
290 2ft3_A Biglycan; proteoglycan, 99.6 2.1E-14 7.1E-19 150.8 17.7 118 60-180 32-160 (332)
291 4gyi_A RIO2 kinase; protein ki 99.6 2.8E-15 9.6E-20 158.1 10.9 138 388-540 100-264 (397)
292 3j0a_A TOLL-like receptor 5; m 99.6 6.6E-15 2.3E-19 174.2 15.0 153 61-225 14-169 (844)
293 1p9a_G Platelet glycoprotein I 99.6 9.6E-15 3.3E-19 150.4 14.2 138 71-224 31-168 (290)
294 2v9t_B SLIT homolog 2 protein 99.6 9.7E-15 3.3E-19 144.0 12.8 143 64-225 7-149 (220)
295 4eco_A Uncharacterized protein 99.6 2.2E-15 7.4E-20 172.6 9.1 152 70-223 205-395 (636)
296 2z80_A TOLL-like receptor 2, v 99.6 2.5E-15 8.4E-20 159.4 8.8 154 58-225 27-195 (353)
297 3oja_B Anopheles plasmodium-re 99.6 4.2E-15 1.4E-19 169.0 11.2 113 72-184 52-164 (597)
298 2wfh_A SLIT homolog 2 protein 99.6 1.3E-14 4.5E-19 139.9 12.6 128 75-219 14-141 (193)
299 3t6q_A CD180 antigen; protein- 99.6 6.2E-15 2.1E-19 167.9 12.0 160 71-248 33-193 (606)
300 2o6q_A Variable lymphocyte rec 99.6 1.9E-14 6.6E-19 146.5 14.3 162 50-225 4-178 (270)
301 2o6s_A Variable lymphocyte rec 99.6 6.5E-15 2.2E-19 143.7 10.2 136 70-225 51-186 (208)
302 2z62_A TOLL-like receptor 4, v 99.6 1.5E-14 5.3E-19 147.6 12.7 187 70-273 51-241 (276)
303 3e6j_A Variable lymphocyte rec 99.6 2.6E-14 8.8E-19 141.8 13.7 143 63-225 14-156 (229)
304 1wwl_A Monocyte differentiatio 99.6 4.5E-15 1.5E-19 154.6 8.4 183 70-271 94-289 (312)
305 1xku_A Decorin; proteoglycan, 99.5 4.9E-14 1.7E-18 147.8 16.4 119 59-180 29-158 (330)
306 3oja_B Anopheles plasmodium-re 99.5 2.3E-14 7.9E-19 162.9 14.2 112 71-182 75-186 (597)
307 1ziw_A TOLL-like receptor 3; i 99.5 1.8E-14 6.2E-19 166.4 13.3 141 71-224 25-165 (680)
308 3v47_A TOLL-like receptor 5B a 99.5 2.5E-14 8.5E-19 156.9 13.6 139 71-222 275-413 (455)
309 2z66_A Variable lymphocyte rec 99.5 1.3E-14 4.4E-19 150.5 10.5 142 70-225 77-220 (306)
310 2v70_A SLIT-2, SLIT homolog 2 99.5 2.8E-14 9.5E-19 140.7 12.0 116 69-184 55-170 (220)
311 2ell_A Acidic leucine-rich nuc 99.5 1.4E-14 4.9E-19 136.2 9.3 135 71-218 24-161 (168)
312 2je0_A Acidic leucine-rich nuc 99.5 1.1E-14 3.8E-19 134.0 7.9 112 71-184 17-130 (149)
313 3cvr_A Invasion plasmid antige 99.5 1.2E-14 4E-19 162.9 9.5 199 50-273 33-247 (571)
314 3j0a_A TOLL-like receptor 5; m 99.5 2.8E-14 9.6E-19 168.8 13.3 111 71-181 266-376 (844)
315 4glp_A Monocyte differentiatio 99.5 7.8E-15 2.7E-19 152.6 7.0 185 72-270 92-286 (310)
316 2xwt_C Thyrotropin receptor; s 99.5 2.3E-14 8E-19 143.0 10.2 136 71-222 31-173 (239)
317 3vq2_A TLR4, TOLL-like recepto 99.5 2.6E-14 9E-19 162.7 11.6 111 71-182 350-463 (606)
318 2wfh_A SLIT homolog 2 protein 99.5 1E-13 3.5E-18 133.6 12.9 122 59-181 8-140 (193)
319 2o6r_A Variable lymphocyte rec 99.5 1.7E-13 5.8E-18 130.0 13.7 115 71-185 28-142 (177)
320 3o6n_A APL1; leucine-rich repe 99.5 5.3E-14 1.8E-18 151.1 11.2 136 71-220 45-181 (390)
321 3o6n_A APL1; leucine-rich repe 99.5 1.3E-13 4.5E-18 148.1 14.3 111 71-182 69-180 (390)
322 4ezg_A Putative uncharacterize 99.5 8.1E-14 2.8E-18 134.8 10.2 132 71-220 44-175 (197)
323 1p9a_G Platelet glycoprotein I 99.5 2.4E-13 8.2E-18 139.9 14.3 134 70-219 54-187 (290)
324 3oja_A Leucine-rich immune mol 99.5 2.3E-14 7.9E-19 158.6 7.0 171 72-270 35-205 (487)
325 2z63_A TOLL-like receptor 4, v 99.5 1.3E-13 4.4E-18 155.6 12.8 142 71-225 28-170 (570)
326 3t6q_A CD180 antigen; protein- 99.5 1.3E-13 4.6E-18 156.9 12.9 144 71-225 350-497 (606)
327 4glp_A Monocyte differentiatio 99.5 6.1E-14 2.1E-18 145.8 8.8 161 70-250 116-288 (310)
328 2xot_A Amphoterin-induced prot 99.5 2.2E-13 7.5E-18 144.8 13.3 142 64-224 14-156 (361)
329 3g39_A Variable lymphocyte rec 99.5 3.3E-13 1.1E-17 127.2 12.4 108 74-184 12-119 (170)
330 2z7x_B TOLL-like receptor 1, v 99.5 1.8E-13 6.2E-18 152.8 12.0 112 72-185 248-392 (520)
331 2z80_A TOLL-like receptor 2, v 99.5 9.3E-14 3.2E-18 147.2 9.1 115 70-185 75-192 (353)
332 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 1.7E-13 5.8E-18 154.6 11.7 93 92-184 350-445 (562)
333 3zyi_A Leucine-rich repeat-con 99.4 3E-13 1E-17 148.3 13.3 174 70-250 98-282 (452)
334 3zyj_A Leucine-rich repeat-con 99.4 3.6E-13 1.2E-17 147.1 13.7 174 70-250 87-271 (440)
335 2id5_A Lingo-1, leucine rich r 99.4 1.2E-13 4.1E-18 152.5 9.9 115 70-184 55-169 (477)
336 4b8c_D Glucose-repressible alc 99.4 2E-14 6.7E-19 166.6 3.7 141 69-225 222-362 (727)
337 4ezg_A Putative uncharacterize 99.4 2.2E-13 7.7E-18 131.6 10.6 131 70-218 65-195 (197)
338 3oja_A Leucine-rich immune mol 99.4 1.3E-13 4.5E-18 152.5 10.1 29 429-457 324-352 (487)
339 2ft3_A Biglycan; proteoglycan, 99.4 8.8E-13 3E-17 138.3 15.6 189 70-269 77-277 (332)
340 2z7x_B TOLL-like receptor 1, v 99.4 2.4E-13 8.1E-18 151.8 11.0 177 71-271 302-483 (520)
341 2r9u_A Variable lymphocyte rec 99.4 6.2E-13 2.1E-17 125.8 12.2 107 74-183 15-121 (174)
342 2xwt_C Thyrotropin receptor; s 99.4 1.3E-13 4.6E-18 137.5 7.8 140 70-225 54-201 (239)
343 1ziw_A TOLL-like receptor 3; i 99.4 6.3E-13 2.2E-17 153.4 14.5 113 72-184 382-497 (680)
344 2z63_A TOLL-like receptor 4, v 99.4 6E-13 2E-17 150.1 11.6 142 70-225 372-515 (570)
345 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 6.2E-13 2.1E-17 150.0 11.6 135 70-220 352-489 (562)
346 1dce_A Protein (RAB geranylger 99.4 6.9E-13 2.3E-17 149.1 11.2 109 72-185 442-551 (567)
347 1xku_A Decorin; proteoglycan, 99.4 1E-12 3.5E-17 137.7 11.8 174 71-269 100-276 (330)
348 4g8a_A TOLL-like receptor 4; l 99.4 1.2E-12 4E-17 149.4 13.0 140 72-224 421-562 (635)
349 3o53_A Protein LRIM1, AGAP0063 99.4 2.9E-13 1E-17 141.1 6.4 131 71-224 34-164 (317)
350 2z81_A CD282 antigen, TOLL-lik 99.4 2.6E-13 8.9E-18 152.5 6.0 116 70-185 49-166 (549)
351 1h6u_A Internalin H; cell adhe 99.4 2.2E-12 7.5E-17 133.9 12.4 128 71-221 63-190 (308)
352 3o53_A Protein LRIM1, AGAP0063 99.4 1.4E-12 4.8E-17 135.9 10.1 136 73-225 122-259 (317)
353 1h6t_A Internalin B; cell adhe 99.4 3E-12 1E-16 131.8 12.2 102 72-181 47-148 (291)
354 1h6u_A Internalin H; cell adhe 99.3 4.4E-12 1.5E-16 131.6 13.5 169 71-270 41-209 (308)
355 2je0_A Acidic leucine-rich nuc 99.3 8.1E-13 2.8E-17 121.4 6.9 114 93-221 15-130 (149)
356 1a9n_A U2A', U2A'; complex (nu 99.3 1.5E-12 5.3E-17 123.3 8.3 132 71-217 19-153 (176)
357 2ifg_A High affinity nerve gro 99.3 2.7E-12 9.1E-17 135.5 10.7 109 60-181 7-117 (347)
358 3cvr_A Invasion plasmid antige 99.3 3.8E-12 1.3E-16 142.5 12.0 134 71-225 80-227 (571)
359 3g39_A Variable lymphocyte rec 99.3 4.4E-12 1.5E-16 119.4 10.5 102 59-160 7-119 (170)
360 3bz5_A Internalin-J, INLJ; leu 99.3 2.2E-12 7.4E-17 141.5 9.4 138 71-219 170-333 (457)
361 2ell_A Acidic leucine-rich nuc 99.3 4E-12 1.4E-16 119.3 9.1 109 70-181 48-161 (168)
362 1jl5_A Outer protein YOPM; leu 99.3 1.9E-12 6.5E-17 141.8 7.8 46 72-118 12-57 (454)
363 1m9s_A Internalin B; cell inva 99.3 3.9E-12 1.3E-16 143.8 10.5 127 70-219 64-190 (605)
364 3bz5_A Internalin-J, INLJ; leu 99.3 1.6E-11 5.5E-16 134.5 13.7 104 70-184 147-250 (457)
365 1h6t_A Internalin B; cell adhe 99.3 1.8E-11 6E-16 125.9 12.9 127 70-219 67-193 (291)
366 1m9s_A Internalin B; cell inva 99.3 1E-11 3.5E-16 140.5 11.9 128 71-221 43-170 (605)
367 1o6v_A Internalin A; bacterial 99.3 2E-11 6.7E-16 134.3 12.9 141 71-221 177-326 (466)
368 4ay9_X Follicle-stimulating ho 99.3 1.3E-11 4.6E-16 130.4 11.0 152 59-222 7-172 (350)
369 1xeu_A Internalin C; cellular 99.3 2.5E-11 8.6E-16 122.8 12.3 125 71-219 41-165 (263)
370 2r9u_A Variable lymphocyte rec 99.2 3.2E-11 1.1E-15 114.0 11.7 109 97-221 14-122 (174)
371 1jl5_A Outer protein YOPM; leu 99.2 5.7E-11 1.9E-15 130.1 15.3 134 71-218 111-251 (454)
372 1dce_A Protein (RAB geranylger 99.2 1E-11 3.5E-16 139.5 9.5 108 96-221 442-550 (567)
373 1o6v_A Internalin A; bacterial 99.2 1.7E-11 5.8E-16 134.9 11.0 107 70-184 220-326 (466)
374 3g06_A SSPH2 (leucine-rich rep 99.2 8.8E-12 3E-16 141.2 8.6 117 49-181 11-135 (622)
375 1xeu_A Internalin C; cellular 99.2 2.4E-11 8.4E-16 122.9 10.6 127 70-220 62-188 (263)
376 1a9n_A U2A', U2A'; complex (nu 99.2 1E-11 3.4E-16 117.6 7.0 107 71-181 42-154 (176)
377 4fmz_A Internalin; leucine ric 99.2 3.4E-11 1.2E-15 126.8 11.8 103 71-181 155-257 (347)
378 2ast_B S-phase kinase-associat 99.2 2.2E-12 7.4E-17 135.4 1.8 108 71-178 93-206 (336)
379 1ds9_A Outer arm dynein; leuci 99.2 4.4E-14 1.5E-18 136.8 -10.9 134 72-222 19-158 (198)
380 4fmz_A Internalin; leucine ric 99.2 5.9E-11 2E-15 125.0 11.7 131 70-221 198-328 (347)
381 2ast_B S-phase kinase-associat 99.2 1.9E-12 6.4E-17 135.9 -1.7 111 71-182 70-184 (336)
382 3goz_A Leucine-rich repeat-con 99.1 5.2E-12 1.8E-16 134.2 0.2 146 71-225 22-188 (362)
383 2ca6_A RAN GTPase-activating p 99.1 1E-11 3.6E-16 133.0 0.8 146 70-224 121-298 (386)
384 2ca6_A RAN GTPase-activating p 99.1 3.4E-12 1.2E-16 136.8 -3.0 111 70-180 59-200 (386)
385 3tm0_A Aminoglycoside 3'-phosp 99.1 1.5E-10 5E-15 117.0 9.1 137 389-540 20-213 (263)
386 2ifg_A High affinity nerve gro 99.1 2.3E-10 7.8E-15 120.6 10.9 106 98-219 11-118 (347)
387 3goz_A Leucine-rich repeat-con 99.1 1.6E-11 5.4E-16 130.5 0.9 142 75-225 2-159 (362)
388 1nd4_A Aminoglycoside 3'-phosp 99.1 5.2E-10 1.8E-14 112.4 12.0 131 390-540 26-214 (264)
389 3g06_A SSPH2 (leucine-rich rep 99.0 4.1E-10 1.4E-14 127.5 11.1 76 72-156 122-214 (622)
390 4ay9_X Follicle-stimulating ho 99.0 5.3E-10 1.8E-14 118.1 10.3 113 66-184 7-121 (350)
391 1ds9_A Outer arm dynein; leuci 99.0 5.2E-12 1.8E-16 122.1 -6.4 112 69-185 46-158 (198)
392 3dxp_A Putative acyl-COA dehyd 98.9 3.8E-09 1.3E-13 111.8 12.6 144 389-541 44-249 (359)
393 1z7x_W Ribonuclease inhibitor; 98.8 2.6E-10 8.8E-15 124.9 -2.9 147 70-225 226-395 (461)
394 1z7x_W Ribonuclease inhibitor; 98.8 2.7E-10 9.2E-15 124.8 -4.3 146 71-225 199-362 (461)
395 3sg8_A APH(2'')-ID; antibiotic 98.7 1.5E-08 5E-13 104.7 5.5 181 389-584 26-288 (304)
396 3un9_A NLR family member X1; l 98.6 6.9E-10 2.3E-14 118.0 -6.6 141 71-220 72-227 (372)
397 3un9_A NLR family member X1; l 98.6 4.2E-09 1.4E-13 111.9 -1.5 140 71-219 101-254 (372)
398 3rw6_A Nuclear RNA export fact 98.5 3.6E-09 1.2E-13 106.2 -2.7 66 117-184 168-237 (267)
399 3r70_A Aminoglycoside phosphot 98.4 1.2E-06 4E-11 91.0 11.6 132 389-541 43-238 (320)
400 3rw6_A Nuclear RNA export fact 98.4 2.5E-07 8.7E-12 92.7 5.6 81 92-174 167-258 (267)
401 3d1u_A Putative fructosamine-3 98.4 4.8E-07 1.6E-11 92.4 7.5 138 389-539 21-215 (288)
402 3ogk_B Coronatine-insensitive 98.3 3.1E-08 1.1E-12 111.9 -3.5 136 71-219 342-503 (592)
403 3tdw_A Gentamicin resistance p 98.3 5.5E-06 1.9E-10 85.3 13.1 136 389-540 25-224 (306)
404 4gkh_A Aminoglycoside 3'-phosp 98.3 5E-06 1.7E-10 83.8 12.2 136 389-540 30-223 (272)
405 3sb4_A Hypothetical leucine ri 98.2 3.3E-06 1.1E-10 87.9 9.7 57 71-128 101-157 (329)
406 1io0_A Tropomodulin; LRR prote 98.2 3.4E-07 1.2E-11 87.0 1.4 111 70-180 35-164 (185)
407 3sb4_A Hypothetical leucine ri 98.1 5.5E-06 1.9E-10 86.2 9.5 101 71-173 226-327 (329)
408 3ogk_B Coronatine-insensitive 98.1 5.7E-07 1.9E-11 101.5 2.1 105 72-177 139-253 (592)
409 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.4E-05 4.7E-10 84.4 9.8 141 389-541 47-244 (362)
410 3ats_A Putative uncharacterize 98.0 1.5E-05 5.1E-10 83.8 9.9 149 389-540 26-252 (357)
411 2p1m_B Transport inhibitor res 97.9 5.9E-07 2E-11 101.4 -4.2 86 94-180 371-469 (594)
412 1io0_A Tropomodulin; LRR prote 97.9 1.6E-06 5.3E-11 82.4 -0.7 122 87-217 28-164 (185)
413 2p1m_B Transport inhibitor res 97.8 1.9E-06 6.5E-11 97.2 -1.4 107 71-177 105-221 (594)
414 2ra8_A Uncharacterized protein 97.7 1E-05 3.4E-10 85.2 1.9 40 142-181 251-293 (362)
415 2olc_A MTR kinase, methylthior 97.6 9.9E-05 3.4E-09 78.8 8.9 79 389-471 36-120 (397)
416 3jr1_A Putative fructosamine-3 97.6 0.00038 1.3E-08 71.5 12.7 136 389-536 42-232 (312)
417 2q83_A YTAA protein; 2635576, 97.6 0.00029 9.9E-09 73.1 11.7 44 497-540 199-252 (346)
418 2ra8_A Uncharacterized protein 97.6 1.5E-05 5.3E-10 83.8 1.5 110 72-181 194-321 (362)
419 3f7w_A Putative fructosamine-3 97.5 0.00019 6.4E-09 72.9 8.6 75 389-474 21-98 (288)
420 4fdw_A Leucine rich hypothetic 97.1 0.0013 4.4E-08 70.2 10.2 103 71-177 203-310 (401)
421 2pyw_A Uncharacterized protein 97.1 0.0016 5.6E-08 69.8 10.1 32 509-541 231-262 (420)
422 4fdw_A Leucine rich hypothetic 97.0 0.0016 5.5E-08 69.4 9.0 135 71-224 226-365 (401)
423 3csv_A Aminoglycoside phosphot 96.9 0.003 1E-07 65.3 9.6 33 509-541 182-218 (333)
424 3e4g_A ATP synthase subunit S, 96.8 0.00052 1.8E-08 63.8 3.0 82 96-177 62-149 (176)
425 2ppq_A HSK, HK, homoserine kin 96.8 0.0035 1.2E-07 64.4 9.3 142 389-540 28-217 (322)
426 3e4g_A ATP synthase subunit S, 96.7 0.00047 1.6E-08 64.0 2.1 84 71-154 61-150 (176)
427 3dxq_A Choline/ethanolamine ki 96.7 0.0023 7.8E-08 65.2 7.4 30 510-540 173-202 (301)
428 1nw1_A Choline kinase (49.2 KD 96.6 0.0049 1.7E-07 66.3 8.9 72 389-473 79-159 (429)
429 1zyl_A Hypothetical protein YI 96.4 0.038 1.3E-06 56.6 14.6 140 390-540 33-223 (328)
430 3rfe_A Platelet glycoprotein I 96.4 0.0053 1.8E-07 54.1 6.4 53 75-129 12-65 (130)
431 3feg_A Choline/ethanolamine ki 96.2 0.011 3.7E-07 62.2 9.0 140 389-540 56-254 (379)
432 3rfe_A Platelet glycoprotein I 96.2 0.0082 2.8E-07 52.8 6.5 57 98-156 11-68 (130)
433 3c5i_A Choline kinase; choline 96.1 0.0081 2.8E-07 63.1 7.1 73 389-473 39-121 (369)
434 2qg7_A Ethanolamine kinase PV0 95.9 0.031 1.1E-06 60.4 10.9 73 389-473 114-188 (458)
435 3i1a_A Spectinomycin phosphotr 95.7 0.037 1.3E-06 57.3 10.2 33 509-541 205-237 (339)
436 1pgv_A TMD-1, tropomodulin TMD 95.7 0.0033 1.1E-07 59.4 2.0 84 70-153 40-136 (197)
437 4h09_A Hypothetical leucine ri 94.9 0.078 2.7E-06 55.5 9.7 103 72-177 218-320 (379)
438 4gt6_A Cell surface protein; l 94.8 0.12 4E-06 54.6 10.7 84 90-176 260-343 (394)
439 4gt6_A Cell surface protein; l 94.8 0.055 1.9E-06 57.2 8.1 105 71-179 265-369 (394)
440 1pgv_A TMD-1, tropomodulin TMD 94.3 0.019 6.5E-07 54.2 2.7 87 91-177 37-136 (197)
441 4fs7_A Uncharacterized protein 93.9 0.077 2.6E-06 56.0 6.9 86 89-177 291-376 (394)
442 4h09_A Hypothetical leucine ri 93.5 0.5 1.7E-05 49.2 12.2 90 88-180 210-299 (379)
443 4fs7_A Uncharacterized protein 93.3 0.13 4.6E-06 54.1 7.5 100 72-177 254-353 (394)
444 3f2s_A CK, chetk-alpha, cholin 93.3 0.24 8.3E-06 52.2 9.3 146 389-540 58-280 (401)
445 2ks1_B Epidermal growth factor 91.3 0.1 3.5E-06 35.7 2.2 27 325-351 15-41 (44)
446 2yle_A Protein spire homolog 1 91.1 0.68 2.3E-05 44.0 8.4 162 472-651 34-198 (229)
447 3g15_A CK, chetk-alpha, cholin 90.9 0.43 1.5E-05 50.4 7.8 29 512-540 246-280 (401)
448 3mes_A Choline kinase; malaria 90.7 0.66 2.3E-05 49.3 9.0 139 389-540 76-291 (424)
449 2l2t_A Receptor tyrosine-prote 89.4 0.13 4.5E-06 35.2 1.4 27 325-351 14-40 (44)
450 4ann_A ESSB; membrane protein, 85.3 1.3 4.4E-05 42.0 6.1 116 442-584 43-158 (215)
451 2jwa_A Receptor tyrosine-prote 77.1 0.75 2.6E-05 31.4 0.9 20 331-350 21-40 (44)
452 3cxl_A N-chimerin; SH2, RHO-GA 76.8 0.39 1.3E-05 51.8 -0.9 62 388-455 147-215 (463)
453 4ano_A ESSB; membrane protein, 74.5 11 0.00036 35.8 8.5 115 442-584 48-163 (219)
454 2k1k_A Ephrin type-A receptor 74.1 0.88 3E-05 30.1 0.6 18 330-347 20-37 (38)
455 1iij_A ERBB-2 receptor protein 22.7 24 0.00082 22.7 0.6 14 335-348 21-34 (35)
456 2l9u_A Receptor tyrosine-prote 22.0 67 0.0023 20.3 2.5 21 329-349 14-34 (40)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.6e-52 Score=432.85 Aligned_cols=255 Identities=18% Similarity=0.328 Sum_probs=201.9
Q ss_pred HHHHHhhhhccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeE
Q 005734 379 ELDTACEDFSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGY 452 (680)
Q Consensus 379 ~l~~~~~~~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~ 452 (680)
|+..++..|.+.||+|+||+||+|++. +++.||||+++.... ....++|.+|++++++++|||||+++|+
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~----~~~~~~f~~E~~il~~l~HpNIV~l~g~ 97 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE----GPLREEFRHEAMLRARLQHPNVVCLLGV 97 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC----C-CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC----hHHHHHHHHHHHHHHhCCCCCCCCcceE
Confidence 334445567789999999999999973 567899999864432 2235679999999999999999999999
Q ss_pred EecCCCCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 005734 453 CEDDEPFNRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLS 518 (680)
Q Consensus 453 ~~~~~~~~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlK 518 (680)
|.+++ ..+||||||++|+|.++|+.+. ...++|.++++|+.|||+||+|||+. +|||||||
T Consensus 98 ~~~~~--~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK 172 (308)
T 4gt4_A 98 VTKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLA 172 (308)
T ss_dssp ECSSS--SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred EEECC--EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCcc
Confidence 99877 5699999999999999996432 24699999999999999999999998 99999999
Q ss_pred CCCeeecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccc
Q 005734 519 SHCIYLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEK 587 (680)
Q Consensus 519 p~NILld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~ 587 (680)
|+|||||+++++||+|||+++........ ....||....+.++.++|||||||++|||+| |+.||.+..
T Consensus 173 ~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~ 252 (308)
T 4gt4_A 173 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 252 (308)
T ss_dssp GGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC
T ss_pred ccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876422111 1122333334578999999999999999999 899998765
Q ss_pred cccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 588 ELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
..++...+... ... ..+.+++.++.+|+.+||+.||++||||+||+++|+.+.++
T Consensus 253 ~~~~~~~i~~~----~~~---------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~nl 307 (308)
T 4gt4_A 253 NQDVVEMIRNR----QVL---------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGNL 307 (308)
T ss_dssp HHHHHHHHHTT----CCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC-
T ss_pred HHHHHHHHHcC----CCC---------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccCC
Confidence 54444444321 111 12234457899999999999999999999999999976543
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=7.6e-51 Score=426.80 Aligned_cols=248 Identities=16% Similarity=0.291 Sum_probs=196.8
Q ss_pred hccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 387 FSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
+.+.||+|+||+||+|++. +++.||||+++... ....++|.+|+++|++++|||||+++|+|.+++ .
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~ 117 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-----ESARQDFQREAELLTMLQHQHIVRFFGVCTEGR--P 117 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--S
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-----HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--E
Confidence 3488999999999999874 47889999986433 344678999999999999999999999999877 6
Q ss_pred eEEEEEecCCCChhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC
Q 005734 461 RMMVFEYAPNGTVFEHLHIKE-------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD 527 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~-------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 527 (680)
.+||||||++|+|.++++... ...++|.++++|+.|||+||+|||+. +||||||||+|||||++
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCC
Confidence 799999999999999997532 24699999999999999999999998 99999999999999999
Q ss_pred CCeEEcccccccccCCCCC----------cccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHH
Q 005734 528 YAAKVAEICFTTIALPKSK----------VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAA 596 (680)
Q Consensus 528 ~~~ki~DFGla~~~~~~~~----------~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~ 596 (680)
+.+||+|||+++....... .....||......+++++|||||||++|||+| |+.||.+....++...+.
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~ 274 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 274 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHH
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 9999999999987643211 11223444455678999999999999999999 999998765444444433
Q ss_pred HHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 597 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
...+. ..+..++.++.+|+.+||+.||++||||+||+++|+.+...+|
T Consensus 275 ~g~~~-------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 275 QGREL-------------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp HTCCC-------------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred cCCCC-------------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 22111 1122344688999999999999999999999999999987654
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.6e-51 Score=424.56 Aligned_cols=249 Identities=15% Similarity=0.277 Sum_probs=200.3
Q ss_pred hccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 387 FSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
+.+.||+|+||+||+|++. ++..||||+++... ....++|.+|+++|++++|||||+++|+|.+++ .
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~ 89 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-----DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--P 89 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--S
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-----hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC--E
Confidence 4589999999999999874 47889999986433 334678999999999999999999999999877 6
Q ss_pred eEEEEEecCCCChhhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 005734 461 RMMVFEYAPNGTVFEHLHIK-----------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA 529 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~-----------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 529 (680)
.+||||||++|+|.++|+.. ....++|.++++|+.|||+||+|||+. +||||||||+|||+|+++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCc
Confidence 79999999999999999743 235799999999999999999999998 9999999999999999999
Q ss_pred eEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHH
Q 005734 530 AKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADY 598 (680)
Q Consensus 530 ~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~ 598 (680)
+||+|||+|+........ ....||......+++++|||||||++|||+| |+.||.+....++...+...
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~ 246 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG 246 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999999876432111 1122333334578999999999999999999 99999876544444443321
Q ss_pred hcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 599 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
... ..+..++.++.+|+.+||+.||++||||+||++.|+++...+|.
T Consensus 247 ~~~-------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~ 293 (299)
T 4asz_A 247 RVL-------------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPV 293 (299)
T ss_dssp CCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCC
T ss_pred CCC-------------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCc
Confidence 111 11223446899999999999999999999999999999876654
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-50 Score=417.14 Aligned_cols=251 Identities=22% Similarity=0.411 Sum_probs=195.0
Q ss_pred hhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.+.||+|+||+||+|++++ .||||+++.... .....++|.+|++++++++|||||+++|+|.++ ..+|||
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---~~~iVm 110 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP---TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVT 110 (307)
T ss_dssp CEEEECCCCSSSEEEEEESSS--EEEEEECCCSSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC---eEEEEE
Confidence 456899999999999999864 599999865432 234567899999999999999999999999754 468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|||++|+|.++|+... ..++|.++++|+.|||+||+|||+. +||||||||+|||||+++.+||+|||+|+......
T Consensus 111 Ey~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp ECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred EcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 9999999999997543 4699999999999999999999998 99999999999999999999999999998764221
Q ss_pred Cc-----ccccccCCCC--------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 546 KV-----SDDIENSVLP--------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 546 ~~-----~~~~~~~~~~--------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
.. ....+.|.+| ..++.++|||||||++|||+||+.||.+.......... +... ...|.
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~---~~~~-----~~~p~ 258 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM---VGRG-----YASPD 258 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH---HHTT-----CCCCC
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHH---HhcC-----CCCCC
Confidence 11 1112233332 34788999999999999999999999865432222211 1111 11222
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
+...+.+++.++.+|+.+||+.||++||||.||++.|+.+....
T Consensus 259 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 23334455678999999999999999999999999999886543
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-47 Score=398.97 Aligned_cols=252 Identities=17% Similarity=0.249 Sum_probs=190.0
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC--CceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP--FNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lV~ 465 (680)
.+.||+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|+|.+++. ...+|||
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~------~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccc------hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 47899999999999998 58899999986432 112234456777788999999999999986542 1468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE-----LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~-----~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
|||++|+|.++++.. .++|..+++|+.|+|+||+|||+. ..++||||||||+|||||+++++||+|||+|+.
T Consensus 81 Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 999999999999753 589999999999999999999986 357999999999999999999999999999987
Q ss_pred cCCCCCcc-------cccccCCCCC-----------CCCCCCCeeehhHHHHHHHhCCCCCCcccc------------cc
Q 005734 541 ALPKSKVS-------DDIENSVLPP-----------LADPETNIYSFGILMLEIISGKLPYCEEKE------------LS 590 (680)
Q Consensus 541 ~~~~~~~~-------~~~~~~~~~~-----------~~s~~sDVySfGvvllElltG~~p~~~~~~------------~~ 590 (680)
........ ...+.|.+|+ .+++++|||||||++|||+||+.|+....+ ..
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 65332111 1122333333 246689999999999999999877642211 11
Q ss_pred HHHHHHHHhcCCCCcccccCcccCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 591 IEKWAADYLNEPRNFSCMIDPSLKS--FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
........... .++|.+.. ...+++..+.+|+.+||+.||++||||.||+++|+++.+.
T Consensus 238 ~~~~~~~~~~~------~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 238 VEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHHTTS------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcc------cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 22222222111 12233321 1235667899999999999999999999999999998654
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7.7e-48 Score=407.26 Aligned_cols=258 Identities=17% Similarity=0.267 Sum_probs=199.3
Q ss_pred HHHHHhhhhccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC-Ccccceee
Q 005734 379 ELDTACEDFSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH-KNFVNLIG 451 (680)
Q Consensus 379 ~l~~~~~~~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g 451 (680)
|+......+.+.||+|+||+||+|++. .++.||||++..... ....++|.+|+++|.+++| ||||+++|
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~----~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC----hHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 343333344589999999999999864 236799998864432 2345789999999999965 89999999
Q ss_pred EEecCCCCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 005734 452 YCEDDEPFNRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517 (680)
Q Consensus 452 ~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDl 517 (680)
+|.+.+. ..+||||||++|+|.++|+... ...++|.+++.|+.|||+||+|||+. +||||||
T Consensus 136 ~~~~~~~-~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 136 ACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp EECCTTS-CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCC-EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 9976542 4689999999999999997432 24589999999999999999999998 9999999
Q ss_pred CCCCeeecCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcc
Q 005734 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEE 586 (680)
Q Consensus 518 Kp~NILld~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~ 586 (680)
||+|||+++++.+||+|||+|+......... ...||......++.++|||||||++|||+| |+.||.+.
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999998765332211 122333334578999999999999999998 99999865
Q ss_pred cc-ccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 587 KE-LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 587 ~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
.. ..+...+....+. ..++.++.++.+++.+||+.||++||||.||+++|+++.+...
T Consensus 292 ~~~~~~~~~i~~g~~~-------------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 292 KIDEEFCRRLKEGTRM-------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp CCSHHHHHHHHHTCCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHcCCCC-------------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 42 2223333221111 1122234678999999999999999999999999999876553
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.5e-46 Score=390.96 Aligned_cols=239 Identities=14% Similarity=0.224 Sum_probs=188.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+. .+|+.||||++...... ....+.|.+|+++|++++|||||++++++.+++ ..||||||
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--~~yiVmEy 104 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS---SKEREESRREVAVLANMKHPNIVQYRESFEENG--SLYIVMDY 104 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC---HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEEEEeC
Confidence 7899999999999997 47999999999765422 334568999999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC--
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-- 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~-- 545 (680)
|++|+|.+++..+....+++.+...|+.||+.||+|||+. +||||||||+||||++++.+||+|||+|+......
T Consensus 105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 9999999999866666789999999999999999999998 99999999999999999999999999998765321
Q ss_pred ------CcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 546 ------KVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 546 ------~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
+.....||......++.++||||+||++|||+||+.||.+.....+ +........ . ..+..
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~---~~~i~~~~~--~--------~~~~~ 248 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL---VLKIISGSF--P--------PVSLH 248 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHTCC--C--------CCCTT
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH---HHHHHcCCC--C--------CCCcc
Confidence 1112223434445678999999999999999999999987543333 333322211 0 01112
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+|+.+||+.||++|||++|+++.
T Consensus 249 ~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 249 YSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 23678899999999999999999999863
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=9.6e-46 Score=380.20 Aligned_cols=244 Identities=21% Similarity=0.326 Sum_probs=185.7
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC--CCCceEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD--EPFNRMM 463 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~l 463 (680)
|.+.||+|+||+||+|... ++..||||++..... .....+.|.+|++++++++|||||++++++.+. .....+|
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 4567999999999999974 688999999865432 234456799999999999999999999998652 1114689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeEEcccccccccC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-DYAAKVAEICFTTIAL 542 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~ki~DFGla~~~~ 542 (680)
|||||++|+|.+++... ..+++.....|+.||+.||+|||+. .++|+||||||+|||+++ ++.+||+|||+|+...
T Consensus 107 vmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999999643 4699999999999999999999987 234999999999999984 7999999999998754
Q ss_pred CCCCcc-cccccCCCC----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 543 PKSKVS-DDIENSVLP----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 543 ~~~~~~-~~~~~~~~~----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
...... ...+.|.+| +.+++++|||||||++|||+||+.||.+... ............. ....+
T Consensus 184 ~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~--~~~~~~~i~~~~~--~~~~~------- 252 (290)
T 3fpq_A 184 ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIYRRVTSGVK--PASFD------- 252 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHHHHHTTTCC--CGGGG-------
T ss_pred CCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc--HHHHHHHHHcCCC--CCCCC-------
Confidence 322111 112233332 3578899999999999999999999975432 2222222222111 11111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....++.+|+.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112256889999999999999999999975
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.1e-45 Score=386.28 Aligned_cols=240 Identities=13% Similarity=0.174 Sum_probs=191.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++..... +.+|++++++++|||||++++++.+++ ..|||||
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----------~~~E~~il~~l~HpnIV~l~~~~~~~~--~~~ivmE 130 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----------RVEELVACAGLSSPRIVPLYGAVREGP--WVNIFME 130 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----------CTHHHHTTTTCCCTTBCCEEEEEEETT--EEEEEEC
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----------HHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEe
Confidence 378999999999999974 789999999865321 247999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-AAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~ki~DFGla~~~~~~~ 545 (680)
||++|+|.++++.. ..+++.....|+.||+.||+|||+. +||||||||+||||+.++ .+||+|||+|+......
T Consensus 131 y~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 131 LLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred ccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 99999999999654 3699999999999999999999998 999999999999999987 69999999998765321
Q ss_pred C-------------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 546 K-------------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 546 ~-------------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
. .....||......++.++|||||||++|||+||+.||.+.....+...+.. .+...
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~---~~~~~------- 275 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS---EPPPI------- 275 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH---SCCGG-------
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc---CCCCc-------
Confidence 1 111223333445678999999999999999999999986554443333322 21111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
...+.....++.+++.+||+.||++|||+.|+++.|......
T Consensus 276 -~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 276 -REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp -GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 112223346789999999999999999999999998877543
No 10
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.6e-45 Score=384.62 Aligned_cols=236 Identities=19% Similarity=0.264 Sum_probs=190.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|+++|++++|||||++++++.+++ ..||||||
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~ivmEy 152 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEF 152 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS-----SGGGGHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEECC
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchh-----HHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEeC
Confidence 78999999999999975 7999999999754322 2345889999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|++|+|.+++.. ..+++.+...|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+........
T Consensus 153 ~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 226 (346)
T 4fih_A 153 LEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 226 (346)
T ss_dssp CTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred CCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc
Confidence 999999999964 3599999999999999999999998 9999999999999999999999999999887533221
Q ss_pred c---cc-----cccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S---DD-----IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~---~~-----~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. .. .||......++.++||||+||++|||+||+.||.+.........+...... .+. ....
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~--~~~---------~~~~ 295 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--RLK---------NLHK 295 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCC--CCS---------CGGG
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC--CCC---------cccc
Confidence 1 11 233333456799999999999999999999999876544444433322111 000 1112
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+|+.+||+.||++|||++|+++.
T Consensus 296 ~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 296 VSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 23678899999999999999999999863
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4e-44 Score=384.68 Aligned_cols=236 Identities=19% Similarity=0.257 Sum_probs=190.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+++|++++|||||++++++.+++ ..||||||
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~iVmEy 229 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEF 229 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS-----SGGGHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchh-----HHHHHHHHHHHHHhCCCCCCCceEEEEEECC--EEEEEEeC
Confidence 78999999999999974 7999999999755422 2345889999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|++|+|.+++... .+++.+...|+.||+.||+|||+. +||||||||+||||+.++.+||+|||+|+........
T Consensus 230 ~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 303 (423)
T 4fie_A 230 LEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 303 (423)
T ss_dssp CTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC
T ss_pred CCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc
Confidence 9999999999643 589999999999999999999999 9999999999999999999999999999876533221
Q ss_pred c--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...||......++.++||||+||++|||+||+.||.+.........+...... .+. ....
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~--~~~---------~~~~ 372 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--RLK---------NLHK 372 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC--CCS---------CTTS
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC--CCc---------cccc
Confidence 1 11233333456789999999999999999999999876544444433322111 000 0112
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+|+.+||+.||++|||++|+++.
T Consensus 373 ~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 373 VSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 23678899999999999999999999863
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.4e-44 Score=363.47 Aligned_cols=237 Identities=16% Similarity=0.273 Sum_probs=178.5
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+. .+|+.||||++....... ......+.+|++++++++|||||++++++.+++ ..++|||
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~ivmE 93 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIMVIE 93 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC--HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEEEe
Confidence 38999999999999997 479999999987543221 233567999999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|| +|+|.+++..+ ..+++.+...++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.......
T Consensus 94 y~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 94 YA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred CC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 99 68999999654 3699999999999999999999998 999999999999999999999999999987653221
Q ss_pred cc--cccccCCC-----CC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--DDIENSVL-----PP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--~~~~~~~~-----~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...+.|.+ .. +.++++||||+||++|||+||+.||.+.....+.+ ........+. .
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~---~i~~~~~~~p-----------~ 233 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK---NISNGVYTLP-----------K 233 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHTCCCCC-----------T
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHH---HHHcCCCCCC-----------C
Confidence 11 11233332 22 34688999999999999999999998654333322 2222211111 1
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||++|+++.
T Consensus 234 ~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 234 FLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 122578899999999999999999999873
No 13
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.9e-44 Score=370.17 Aligned_cols=236 Identities=18% Similarity=0.269 Sum_probs=189.2
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+. .+|+.||||++...... .....+.+.+|+++|++++|||||++++++.+++ ..|||||
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~yivmE 112 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHII--KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYFGLS 112 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEe
Confidence 38999999999999997 47899999998754321 1223467999999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|.+++... ..++......|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.......
T Consensus 113 y~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 113 YAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred cCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 99999999999643 3699999999999999999999999 999999999999999999999999999998753221
Q ss_pred cc-----cccccCCCC-----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 VS-----DDIENSVLP-----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~~-----~~~~~~~~~-----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.. ...+.|.+| ..++.++||||+||++|||+||+.||.+.....+.. ........+.
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~---~i~~~~~~~p---------- 254 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA---KIIKLEYDFP---------- 254 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHTCCCCC----------
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHcCCCCCC----------
Confidence 11 122334333 457889999999999999999999998654333333 2222221111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDII 646 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~ 646 (680)
+....++.+|+.+|++.||++|||++|+.
T Consensus 255 -~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 255 -EKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 11225788999999999999999999874
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=7.6e-44 Score=367.91 Aligned_cols=231 Identities=15% Similarity=0.174 Sum_probs=176.2
Q ss_pred ccccCCCCCCeEEEEEe----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTL----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||+||+|+. .+++.||||++....... .....+.+|+++|++++|||||++++++.+++ ..|+
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~i 103 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV---RDRVRTKMERDILVEVNHPFIVKLHYAFQTEG--KLYL 103 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE---EECC------CCCCCCCCTTEECEEEEEEETT--EEEE
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh---HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEE
Confidence 38999999999999986 257889999986543221 11235889999999999999999999999887 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|||||++|+|.+++... ..+++.+...++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 99999999999999643 3699999999999999999999998 999999999999999999999999999987543
Q ss_pred CCCc---ccccccC-----CCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSKV---SDDIENS-----VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~~---~~~~~~~-----~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.... ....+.| .....++.++||||+||++|||+||+.||.+.....+... .......+
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~---i~~~~~~~---------- 245 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM---ILKAKLGM---------- 245 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHHCCCCC----------
T ss_pred CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHH---HHcCCCCC----------
Confidence 2211 1112333 3345678999999999999999999999987554333332 22221111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTM 642 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm 642 (680)
+.....++.+|+.+||+.||++|||+
T Consensus 246 -p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 246 -PQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -CCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 11223578899999999999999984
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.6e-42 Score=359.25 Aligned_cols=237 Identities=12% Similarity=0.236 Sum_probs=174.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC--------
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF-------- 459 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~-------- 459 (680)
+.||+|+||+||+|+.. +|+.||||++..... ....+.|.+|+++|++++|||||++++++.+.+..
T Consensus 11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~----~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~ 86 (299)
T 4g31_A 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR----ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86 (299)
T ss_dssp EEEEECC--EEEEEEETTTCCEEEEEEEEECSS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence 89999999999999974 789999999876542 23456799999999999999999999998754321
Q ss_pred --ceEEEEEecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 460 --NRMMVFEYAPNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 460 --~~~lV~ey~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
..|+|||||++|+|.+++..+. ....++...+.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred CcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccCc
Confidence 2589999999999999997543 23467788899999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCc--------------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHH
Q 005734 537 FTTIALPKSKV--------------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAA 596 (680)
Q Consensus 537 la~~~~~~~~~--------------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~ 596 (680)
+|+........ ....||......++.++|||||||++|||++ ||.... +....+.
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~--~~~~~~~ 238 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM--ERVRTLT 238 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH--HHHHHHH
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc--HHHHHHH
Confidence 99886532111 1112333334567899999999999999997 775432 1112222
Q ss_pred HHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 597 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..... ... + ..........+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~--~~p----~----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 239 DVRNL--KFP----P----LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHTT--CCC----H----HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHhcC--CCC----C----CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 21111 111 0 11222345678999999999999999999986
No 16
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.2e-41 Score=355.33 Aligned_cols=275 Identities=24% Similarity=0.515 Sum_probs=221.3
Q ss_pred CCCCCCHHHHHHHhhhhc--cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccc
Q 005734 371 GVPKLNRLELDTACEDFS--NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVN 448 (680)
Q Consensus 371 ~~~~~~~~~l~~~~~~~~--~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~ 448 (680)
....++..++...+++|. +.||+|+||.||+|+..+|+.||||++...... .....|.+|++++++++||||++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~ 91 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ----GGELQFQTEVEMISMAVHRNLLR 91 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC---------CCCHHHHHHHGGGTCCCTTBCC
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc----hHHHHHHHHHHHHHhccCCCccc
Confidence 345678888888888887 899999999999999888999999998654321 12236899999999999999999
Q ss_pred eeeEEecCCCCceEEEEEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 005734 449 LIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKE--MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526 (680)
Q Consensus 449 l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~--~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~ 526 (680)
++++|...+ ..++||||+++|+|.+++.... ...++|..+..|+.+++.||+|||+.+.++|+||||||+|||+++
T Consensus 92 ~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~ 169 (326)
T 3uim_A 92 LRGFCMTPT--ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE 169 (326)
T ss_dssp CCEEECCSS--CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT
T ss_pred eEEEEecCC--ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC
Confidence 999998877 6699999999999999997543 345999999999999999999999988889999999999999999
Q ss_pred CCCeEEcccccccccCCCCCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCc-----cccccHH
Q 005734 527 DYAAKVAEICFTTIALPKSKVS---------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCE-----EKELSIE 592 (680)
Q Consensus 527 ~~~~ki~DFGla~~~~~~~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~-----~~~~~~~ 592 (680)
++.+||+|||+++......... ...|+......+++++||||||+++|||+||+.||.. .......
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 249 (326)
T 3uim_A 170 EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249 (326)
T ss_dssp TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHH
T ss_pred CCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHH
Confidence 9999999999998764322111 1112222233467889999999999999999999962 2334556
Q ss_pred HHHHHHhcCCCCcccccCcccC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 593 KWAADYLNEPRNFSCMIDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 593 ~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
+|+...... .......+..+. ....+...++.+++.+||+.||++|||++||+++|++.
T Consensus 250 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 250 DWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHHTTTTSS-CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHhhc-hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 666555444 344555555554 46678889999999999999999999999999999874
No 17
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.9e-41 Score=352.12 Aligned_cols=265 Identities=21% Similarity=0.481 Sum_probs=212.4
Q ss_pred HHhhhhc--cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 382 TACEDFS--NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 382 ~~~~~~~--~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
.++++|. +.||+|+||.||+|+..+|+.||||++..... ...+.|.+|++++++++||||++++++|.+.+
T Consensus 36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 108 (321)
T 2qkw_B 36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS-----QGIEEFETEIETLSFCRHPHLVSLIGFCDERN-- 108 (321)
T ss_dssp CCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS-----SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT--
T ss_pred HHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--
Confidence 3445554 89999999999999998899999998865432 23457899999999999999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKE--MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF 537 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~--~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGl 537 (680)
..++||||+++|+|.+++.... ...++|..+++++.++++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 6799999999999999997543 24699999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc---ccHHHHHHHHhcCCCC
Q 005734 538 TTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE---LSIEKWAADYLNEPRN 604 (680)
Q Consensus 538 a~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~---~~~~~~~~~~~~~~~~ 604 (680)
++......... ...|+......++.++||||||+++|||+||+.||....+ .....|....... ..
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~ 264 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN-GQ 264 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT-TC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc-cc
Confidence 98654221110 1112222234568899999999999999999999975332 3345554443332 34
Q ss_pred cccccCcccC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 605 FSCMIDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 605 ~~~~~d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
+...+++.+. ....+...++.+++.+||+.||++|||+.||++.|+.+.....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 5556666554 4567888999999999999999999999999999999877543
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=358.17 Aligned_cols=252 Identities=10% Similarity=0.115 Sum_probs=188.0
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC----CCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE----PFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~ 462 (680)
.+.||+|+||+||+|+. .+|+.||||++...... ....+.+.+|+++|++++|||||++++++.... ....|
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 135 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV---VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS---HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccc---hHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence 38999999999999997 47999999998643321 234567889999999999999999999986432 12579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
||||||+ |+|.+++... ..+++.+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+...
T Consensus 136 ivmE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 136 VVLDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 9999995 7899999643 4799999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCC-------cccccccCCC-----C-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC-cccc
Q 005734 543 PKSK-------VSDDIENSVL-----P-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN-FSCM 608 (680)
Q Consensus 543 ~~~~-------~~~~~~~~~~-----~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~ 608 (680)
.... .....+.|.+ . .+++.++||||+||++|||+||+.||.+....+....+......+.. ....
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 2211 0111222322 2 35688999999999999999999999876655555544443332211 0000
Q ss_pred cCc--------ccC---CC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 609 IDP--------SLK---SF-----KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 609 ~d~--------~l~---~~-----~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.. .+. .. ......++.+|+.+|+..||++|||++|+++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000 000 00 01123578899999999999999999999874
No 19
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.8e-39 Score=337.38 Aligned_cols=276 Identities=21% Similarity=0.432 Sum_probs=219.1
Q ss_pred CCCCCHHHHHHHhhhhc--------cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC
Q 005734 372 VPKLNRLELDTACEDFS--------NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH 443 (680)
Q Consensus 372 ~~~~~~~~l~~~~~~~~--------~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H 443 (680)
...|++.++..++.+|+ +.||+|+||.||+|+. ++..||||++...... ......+.|.+|++++++++|
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI-TTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTS-CTTTHHHHHHHHHHHHHHCCC
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCc-chHHHHHHHHHHHHHHHhcCC
Confidence 45688999999999986 5699999999999987 5789999988643211 112345679999999999999
Q ss_pred CcccceeeEEecCCCCceEEEEEecCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005734 444 KNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIK-EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCI 522 (680)
Q Consensus 444 ~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~-~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NI 522 (680)
|||+++++++.+.+ ..++||||+++|+|.+++... ....++|..+++|+.++++||+|||+. +|+||||||+||
T Consensus 90 ~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Ni 164 (307)
T 2nru_A 90 ENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANI 164 (307)
T ss_dssp TTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred CCeEEEEEEEecCC--ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHE
Confidence 99999999998877 679999999999999999643 245699999999999999999999998 999999999999
Q ss_pred eecCCCCeEEcccccccccCCCCCcc-----cccccCCCC----CCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-HH
Q 005734 523 YLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVLP----PLADPETNIYSFGILMLEIISGKLPYCEEKELS-IE 592 (680)
Q Consensus 523 Lld~~~~~ki~DFGla~~~~~~~~~~-----~~~~~~~~~----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-~~ 592 (680)
++++++.+||+|||+++......... ...+.+..| +.++.++||||||+++|||+||+.||....... ..
T Consensus 165 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 244 (307)
T 2nru_A 165 LLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244 (307)
T ss_dssp EECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred EEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence 99999999999999998764321110 011122221 246788999999999999999999997644322 23
Q ss_pred HHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 593 KWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 593 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+..........+...+++.+..........+.+++.+||+.+|++|||+++|++.|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 33333333334445556666666777888999999999999999999999999999998753
No 20
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.3e-39 Score=346.15 Aligned_cols=248 Identities=17% Similarity=0.305 Sum_probs=197.5
Q ss_pred ccccCCCCCCeEEEEEe--------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCC
Q 005734 388 SNIIDTQSGCTIYKGTL--------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEP 458 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~--------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 458 (680)
.+.||+|+||.||+|+. .++..||||++..... ....+++.+|+++++++ +|||||+++++|.+.+
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~- 160 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT----EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG- 160 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB----HHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS-
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC----HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC-
Confidence 48999999999999985 2456799999864432 33456799999999999 8999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl 524 (680)
..++||||+++|+|.+++.... ...+++..+++++.||++||+|||+. +|+||||||+|||+
T Consensus 161 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 161 -PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp -SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred -CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 6799999999999999997543 23589999999999999999999998 99999999999999
Q ss_pred cCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHH
Q 005734 525 TDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEK 593 (680)
Q Consensus 525 d~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~ 593 (680)
+.++.+||+|||+++......... ...|+......++.++|||||||++|||+| |+.||.+.....+..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~ 316 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 999999999999998664322111 112333334567889999999999999999 999998765444444
Q ss_pred HHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 594 WAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 594 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
.+...... ..+..+..++.+++.+||+.+|++||++.|+++.|+++.....
T Consensus 317 ~~~~~~~~-------------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 317 LLKEGHRM-------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp HHHTTCCC-------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHhcCCCC-------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 33221111 1112233678999999999999999999999999999876543
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.2e-39 Score=360.88 Aligned_cols=245 Identities=13% Similarity=0.141 Sum_probs=189.7
Q ss_pred hhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhh-HHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 385 EDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDW-LKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 385 ~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
++|. ++||+|+||.||+|+.. +|+.||||++........ ..........++++++.++|||||++++++.+.+ .
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~--~ 266 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--K 266 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--E
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--E
Confidence 3454 89999999999999975 799999999975432211 1122233445577888889999999999999887 7
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.|+|||||++|+|.++|... ..++......++.||+.||+|||+. +||||||||+|||||.++.+||+|||+|+.
T Consensus 267 lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 89999999999999999643 3699999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCc-ccccccCCC------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 541 ALPKSKV-SDDIENSVL------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 541 ~~~~~~~-~~~~~~~~~------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
....... ....+.|.+ ...++.++||||+||++|||+||+.||.+....+..+...........+.
T Consensus 342 ~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p------- 414 (689)
T 3v5w_A 342 FSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP------- 414 (689)
T ss_dssp CSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC-------
T ss_pred cCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC-------
Confidence 7543221 122233333 23578899999999999999999999986544444444443333322211
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPT-----MNDIIV 647 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt-----m~ev~~ 647 (680)
.....++.+|+.+|++.||++|++ ++||.+
T Consensus 415 ----~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 ----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp ----TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ----ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 112367889999999999999998 677765
No 22
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7e-39 Score=335.05 Aligned_cols=248 Identities=19% Similarity=0.320 Sum_probs=190.6
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||+||+|+. +|..||||++...... ....++|.+|++++++++|||||++++++.+.+ ..++||||
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 115 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFH---AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP--NLSIVTEY 115 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCS---HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT--CCEEEEEC
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--ceEEEEec
Confidence 38999999999999987 5888999998654322 344567999999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 468 APNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPP--VAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 468 ~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
+++|+|.+++.... ...+++..++.++.|+++||+|||+. + |+||||||+|||++.++.+||+|||+++.....
T Consensus 116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 99999999997543 12489999999999999999999998 6 999999999999999999999999999765432
Q ss_pred CC--------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SK--------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~--------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.. .....|+......+++++||||||+++|||+||+.||...........+...... . ..
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~-~-----------~~ 260 (309)
T 3p86_A 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR-L-----------EI 260 (309)
T ss_dssp ---------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCC-C-----------CC
T ss_pred ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-C-----------CC
Confidence 11 1112233334456788999999999999999999999865433333222211111 1 11
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
+.....++.+++.+||+.+|++|||++++++.|+.+....
T Consensus 261 ~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 261 PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 1223367899999999999999999999999999997654
No 23
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.2e-39 Score=346.56 Aligned_cols=244 Identities=17% Similarity=0.332 Sum_probs=187.4
Q ss_pred ccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|+.. ++..||||++..... ....++|.+|++++++++|||||+++|+|.+.+ ..++
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~l 123 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT----EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMI 123 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCEE
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--ceEE
Confidence 489999999999999874 577899999865431 344678999999999999999999999998877 6799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.++++.. ...+++.+++.|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 99999999999999743 34699999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 544 KSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 544 ~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
..... ...|+......+++++|||||||++|||+| |+.||.......+...+......+
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~--------- 270 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP--------- 270 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECC---------
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---------
Confidence 21111 112222223457888999999999999998 999997655444333332221111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+..++.++.+++.+||+.+|++||+|++|++.|+++..
T Consensus 271 ----~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 271 ----PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp ----CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 111233678999999999999999999999999999864
No 24
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=338.71 Aligned_cols=248 Identities=17% Similarity=0.329 Sum_probs=195.6
Q ss_pred ccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|... .+..||||++..... ....+.|.+|++++++++||||+++++++.+++ ..++
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 127 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT----ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR--LAMI 127 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG--CCEE
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC----HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--ccEE
Confidence 389999999999999984 345699999864332 344568999999999999999999999998877 6799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.++++... ..+++..++.|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 128 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred EeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 999999999999996443 4699999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 544 KSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 544 ~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
..... ...|+......++.++||||||+++|||+| |+.||.......+...+......+
T Consensus 204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~--------- 274 (325)
T 3kul_A 204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP--------- 274 (325)
T ss_dssp ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC---------
T ss_pred CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCC---------
Confidence 22111 111222222456788999999999999999 999997655443333332211110
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
.+...+.++.+++.+||+.||++|||+.+|++.|+.+......
T Consensus 275 ----~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 275 ----APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred ----CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 1122336789999999999999999999999999999876544
No 25
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.5e-39 Score=341.61 Aligned_cols=181 Identities=13% Similarity=0.244 Sum_probs=149.6
Q ss_pred cccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 463 (680)
+.||+|+||+||+|+.+ +++.||||++.... ....+.+|+++|.++ +|||||++++++.+.+ ..++
T Consensus 27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-------~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~--~~~l 97 (361)
T 4f9c_A 27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-------HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND--HVVI 97 (361)
T ss_dssp EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-------CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT--EEEE
T ss_pred EEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-------CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC--EEEE
Confidence 89999999999999853 56789999885432 134578999999998 6999999999999887 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeEEcccccccccC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-YAAKVAEICFTTIAL 542 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~ki~DFGla~~~~ 542 (680)
|||||++|+|.+++. .+++.+...++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 98 vmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 98 AMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 999999999999984 489999999999999999999998 99999999999999877 799999999998654
Q ss_pred CCCCc-------------------------------ccccccCCCC------CCCCCCCCeeehhHHHHHHHhCCCCCCc
Q 005734 543 PKSKV-------------------------------SDDIENSVLP------PLADPETNIYSFGILMLEIISGKLPYCE 585 (680)
Q Consensus 543 ~~~~~-------------------------------~~~~~~~~~~------~~~s~~sDVySfGvvllElltG~~p~~~ 585 (680)
..... ....+.|.+| ..++.++||||+||+++||+||+.||..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 21100 0011223222 2468889999999999999999999964
Q ss_pred c
Q 005734 586 E 586 (680)
Q Consensus 586 ~ 586 (680)
.
T Consensus 250 ~ 250 (361)
T 4f9c_A 250 A 250 (361)
T ss_dssp C
T ss_pred C
Confidence 3
No 26
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.2e-39 Score=350.75 Aligned_cols=244 Identities=18% Similarity=0.293 Sum_probs=195.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +++.||||++..... .....+|.+|++++++++|||||+++|+|...+ ..++|||
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e 192 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP----PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIVME 192 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC----HHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS--SCEEEEE
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCC----HHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC--CcEEEEE
Confidence 489999999999999986 789999998864321 234567999999999999999999999998877 5699999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.++++.. ...+++..+++++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 193 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp CCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 99999999999743 23589999999999999999999998 999999999999999999999999999986543211
Q ss_pred cc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 547 VS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 547 ~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.. ...|+......++.++|||||||++|||+| |+.||.........+.+...... .
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-------------~ 335 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL-------------P 335 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCC-------------C
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------C
Confidence 10 112222222456788999999999999999 99999865544333333221111 0
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+..++.++.+++.+||+.||++|||+++|++.|+++.+
T Consensus 336 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 112234678999999999999999999999999999865
No 27
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4e-39 Score=355.10 Aligned_cols=245 Identities=16% Similarity=0.271 Sum_probs=197.4
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||.||+|...++..||||++..... ..++|.+|++++++++|||||++++++.. + ..++|||
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-~--~~~lv~e 262 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM------SVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIITE 262 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB------CHHHHHHHHHHHTTCCCTTBCCEEEEECS-S--SCEEEEC
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCCc------cHHHHHHHHHHHhhCCCCCEeeEEEEEeC-C--ccEEEEe
Confidence 3489999999999999998889999999865331 24579999999999999999999999873 3 4699999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|.++++......+++..+++++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 99999999999755444689999999999999999999998 999999999999999999999999999987642211
Q ss_pred ---------cccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 ---------VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ---------~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.....|+......++.++|||||||++|||+| |+.||.+....++...+......+ .
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~-------------~ 406 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP-------------R 406 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCC-------------C
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-------------C
Confidence 01122333333567889999999999999999 999998655444444333221111 1
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
+..++.++.+++.+||+.||++||||++|++.|+++....
T Consensus 407 ~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 407 PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 1223468899999999999999999999999999986544
No 28
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2e-38 Score=357.37 Aligned_cols=240 Identities=20% Similarity=0.258 Sum_probs=190.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+.+ ..+||||
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~iv~E 234 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVMIYE 234 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEe
Confidence 489999999999999974 79999999986543 223457889999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC--CCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD--YAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~--~~~ki~DFGla~~~~~~ 544 (680)
||++|+|.+++..+ ...+++.+...++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 235 ~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 235 FMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp CCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred ecCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence 99999999999643 34699999999999999999999999 99999999999999854 88999999999987644
Q ss_pred CCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 545 SKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 545 ~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.... ...||......++.++||||+||++|||++|+.||.+.........+ ......+. ++....
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i---~~~~~~~~---~~~~~~-- 382 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV---KSCDWNMD---DSAFSG-- 382 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH---HTTCCCCC---SGGGTT--
T ss_pred CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH---HhCCCCCC---cccccC--
Confidence 3221 12233334456788999999999999999999999875543333322 22211111 111111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+|+.+||+.||++|||+.|+++.
T Consensus 383 --~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 383 --ISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp --SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 22578899999999999999999999863
No 29
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.3e-38 Score=330.94 Aligned_cols=252 Identities=17% Similarity=0.224 Sum_probs=198.1
Q ss_pred CCCCHHHHHHHhhh----------h--ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHH
Q 005734 373 PKLNRLELDTACED----------F--SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLS 439 (680)
Q Consensus 373 ~~~~~~~l~~~~~~----------~--~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~ 439 (680)
+.++..++..+++. | .+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~-----~~~~~~~E~~~l~ 97 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ-----RRELLFNEVVIMR 97 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----SHHHHHHHHHHHT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh-----HHHHHHHHHHHHH
Confidence 45778888877764 2 268999999999999986 7999999998654322 2456889999999
Q ss_pred cCCCCcccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005734 440 RINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSS 519 (680)
Q Consensus 440 ~l~H~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp 519 (680)
+++|||||++++++...+ ..++||||+++|+|.+++.. ..++|..+..++.++++||+|||+. +|+||||||
T Consensus 98 ~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp 169 (321)
T 2c30_A 98 DYQHFNVVEMYKSYLVGE--ELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKS 169 (321)
T ss_dssp TCCCTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred hCCCCCcceEEEEEEECC--EEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCH
Confidence 999999999999999877 78999999999999999863 3599999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccccccccCCCCCcc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccH
Q 005734 520 HCIYLTDDYAAKVAEICFTTIALPKSKVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSI 591 (680)
Q Consensus 520 ~NILld~~~~~ki~DFGla~~~~~~~~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~ 591 (680)
+||+++.++.+||+|||+++......... ...|+......+++++||||||+++|||+||+.||........
T Consensus 170 ~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~ 249 (321)
T 2c30_A 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA 249 (321)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred HHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999999999999999998765322111 1223333445678899999999999999999999976543333
Q ss_pred HHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 592 EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...+...... ... .......++.+++.+||+.||++|||++|+++.
T Consensus 250 ~~~~~~~~~~--~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 MKRLRDSPPP--KLK---------NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHSSCC--CCT---------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHhcCCCC--CcC---------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 3332221111 000 011223578899999999999999999999863
No 30
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=332.23 Aligned_cols=240 Identities=17% Similarity=0.253 Sum_probs=192.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+.. +|+.||+|++.... ....+.|.+|++++++++||||+++++++.+++ ..++|||
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 87 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-----EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--RLNFITE 87 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--eeEEEEE
Confidence 389999999999999975 68999999875432 345678999999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ...++|.+++.|+.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 88 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 88 YIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp CCTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 99999999999753 34699999999999999999999998 999999999999999999999999999987643211
Q ss_pred c----------------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc------ccHHHHHHHH
Q 005734 547 V----------------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE------LSIEKWAADY 598 (680)
Q Consensus 547 ~----------------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~------~~~~~~~~~~ 598 (680)
. ....|+......+++++||||||+++|||+||..|+..... ..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY 243 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc
Confidence 1 01223333445678899999999999999999999864221 1111111111
Q ss_pred hcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 599 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+..++.++.+++.+||+.||++|||++++++.|+++...
T Consensus 244 -----------------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 244 -----------------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp -----------------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0112224688999999999999999999999999998653
No 31
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.3e-39 Score=362.71 Aligned_cols=245 Identities=15% Similarity=0.285 Sum_probs=198.4
Q ss_pred hhccccCCCCCCeEEEEEeCC-CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLSS-GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~~-g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
.+.+.||+|+||.||+|+... +..||||++..... ..++|.+|++++++++|||||+++|+|.+.+ ..++|
T Consensus 223 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv 294 (495)
T 1opk_A 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM------EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 294 (495)
T ss_dssp EEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEE
T ss_pred eeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc------chHHHHHHHHHHHhcCCCCEeeEEEEEecCC--cEEEE
Confidence 345899999999999999864 88999999865431 2457999999999999999999999998877 56999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
||||++|+|.++++......+++..++.|+.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 9999999999999866666799999999999999999999998 9999999999999999999999999999876532
Q ss_pred CCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 545 SKVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 545 ~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
.... ...|+......++.++|||||||++|||+| |+.||.+.....+.+.+....+.
T Consensus 372 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~------------- 438 (495)
T 1opk_A 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM------------- 438 (495)
T ss_dssp CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC-------------
T ss_pred ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------
Confidence 2111 111222222456788999999999999999 99999876544554444322111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+..++.++.+|+.+||+.||++||||.+|++.|+.+..
T Consensus 439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1122334678999999999999999999999999998753
No 32
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=343.86 Aligned_cols=266 Identities=17% Similarity=0.286 Sum_probs=200.6
Q ss_pred hccccCCCCCCeEEEEEeC--------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCC
Q 005734 387 FSNIIDTQSGCTIYKGTLS--------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDE 457 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~--------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 457 (680)
+.+.||+|+||.||+|+.. ++..||||++..... ....+++.+|+++++++ +|||||+++++|..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT----EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC----HHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 3489999999999999852 345799998865432 33456799999999999 8999999999999877
Q ss_pred CCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 005734 458 PFNRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIY 523 (680)
Q Consensus 458 ~~~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 523 (680)
..++||||+++|+|.+++.... ...+++..+++|+.|+++||+|||+. +|+||||||+|||
T Consensus 149 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 149 --PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp --SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred --ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 5799999999999999997543 24599999999999999999999998 9999999999999
Q ss_pred ecCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHH
Q 005734 524 LTDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIE 592 (680)
Q Consensus 524 ld~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~ 592 (680)
+++++.+||+|||+++......... ...|+......++.++|||||||+++||+| |+.||.......+.
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~ 303 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999999999999998764321111 112333334567889999999999999999 99999765433333
Q ss_pred HHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCCCCCCCChhHHHHH
Q 005734 593 KWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAEL 672 (680)
Q Consensus 593 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~~~~~~~~~~~~~~ 672 (680)
+.+...... . .+.....++.+++.+||+.+|++|||++||++.|+++......+........++.+.
T Consensus 304 ~~~~~~~~~----~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~~~~~~~~~ 370 (382)
T 3tt0_A 304 KLLKEGHRM----D---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYYHHHHHHDY 370 (382)
T ss_dssp HHHHTTCCC----C---------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC------------
T ss_pred HHHHcCCCC----C---------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCCCccccccC
Confidence 333221111 0 111223678999999999999999999999999999998888877777766666665
Q ss_pred Hh
Q 005734 673 EI 674 (680)
Q Consensus 673 ~~ 674 (680)
.+
T Consensus 371 ~~ 372 (382)
T 3tt0_A 371 DI 372 (382)
T ss_dssp --
T ss_pred CC
Confidence 54
No 33
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=9.5e-39 Score=351.61 Aligned_cols=243 Identities=19% Similarity=0.326 Sum_probs=196.0
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|... |+.||||+++... ..++|.+|++++++++|||||+++++|.+.+. ..++||||
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~iv~e~ 268 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEY 268 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT-------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS-CEEEEEEC
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch-------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC-ceEEEEEe
Confidence 389999999999999986 7799999986432 23579999999999999999999999876542 46999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|++|+|.+++.......+++..+++++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 345 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 345 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccC
Confidence 9999999999866555689999999999999999999998 9999999999999999999999999999865422111
Q ss_pred c-----cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 548 S-----DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 548 ~-----~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
. ...|+......++.++|||||||++|||+| |+.||......++...+....+. ..+..++
T Consensus 346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~-------------~~p~~~~ 412 (450)
T 1k9a_A 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-------------DAPDGCP 412 (450)
T ss_dssp -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCC-------------CCCTTCC
T ss_pred CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------CCCCcCC
Confidence 1 222333334567889999999999999999 99999876545554443322111 1122334
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 622 EAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.++.+++.+||+.||++|||+.++++.|+++...
T Consensus 413 ~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 413 PAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 6889999999999999999999999999998654
No 34
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.4e-38 Score=323.91 Aligned_cols=243 Identities=16% Similarity=0.294 Sum_probs=194.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|...++..||||++..... ..+++.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 86 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFEF 86 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSB------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEEEC
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEeccccc------CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--ceEEEEEe
Confidence 389999999999999998899999999865432 1346899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.... ..+++..++.++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 87 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 87 MEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp CTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 99999999996433 4689999999999999999999998 9999999999999999999999999999876422110
Q ss_pred ---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 548 ---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 548 ---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
....|+......+++++||||+|++++||+| |+.||...........+...... .. +
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~-------~~------~ 229 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL-------YK------P 229 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC-------CC------C
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccC-------CC------C
Confidence 1122333333467889999999999999999 99999865433333322221110 00 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.....++.+++.+||+.+|++||++++++++|+++.+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 11236789999999999999999999999999998753
No 35
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=5.4e-39 Score=353.78 Aligned_cols=248 Identities=16% Similarity=0.265 Sum_probs=195.1
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||.||+|...++..||||++..... ..++|.+|++++++++|||||++++++.+ + ..++|||
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~--~~~iv~e 258 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTE 258 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEEC
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C--ceEEEeh
Confidence 3489999999999999998888899999865331 13579999999999999999999999976 3 4689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|.+++.......+++..+++++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 99999999999754445699999999999999999999998 999999999999999999999999999987643211
Q ss_pred c---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 V---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
. ....|+......++.++|||||||++|||+| |+.||.+....++...+....+. ..
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~-------------~~ 402 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-------------PC 402 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC-------------CC
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------CC
Confidence 1 1122333333467889999999999999999 99999865433333333221111 01
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCC
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~ 659 (680)
+..++..+.+++.+||+.+|++|||+++|++.|+++......+
T Consensus 403 ~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~ 445 (452)
T 1fmk_A 403 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445 (452)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcc
Confidence 1233467899999999999999999999999999987655443
No 36
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.7e-38 Score=334.84 Aligned_cols=242 Identities=14% Similarity=0.278 Sum_probs=187.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEE----EEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEI----AVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~v----aVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
+.||+|+||+||+|+.. +|+.+ |+|.+.... .....++|.+|++++++++|||||+++++|.++. .++
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~ 93 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----SPKANKEILDEAYVMASVDNPHVCRLLGICLTST---VQL 93 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC-----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS---EEE
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC---eEE
Confidence 89999999999999964 55544 666554221 1234567999999999999999999999998754 589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+++|+|.+++.... ..+++..++.|+.++++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999999997543 4699999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 544 KSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 544 ~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
..... ...|+......++.++|||||||++|||+| |+.||.......+...+......+
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---------- 239 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---------- 239 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC----------
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCC----------
Confidence 22111 112222233457889999999999999999 999998765555544443321110
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+..+..++.+++.+||+.+|++||+|.++++.|+.+..
T Consensus 240 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 240 ---QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ---CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ---CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111223678899999999999999999999999998864
No 37
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.3e-37 Score=325.02 Aligned_cols=250 Identities=22% Similarity=0.399 Sum_probs=191.4
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||.||+|+... .+|||+++..... ....+.|.+|++++++++||||+++++++..+ ..++|||
T Consensus 40 ~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv~e 111 (307)
T 3lb7_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPT---PEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVTQ 111 (307)
T ss_dssp EEEEEEECSSCEEEEEESSS--EEEEEECCCSSCC---HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEE
T ss_pred EEeEecCCCCeEEEEEEECC--EEEEEEEecCCCC---HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC---cEEEEEe
Confidence 34899999999999998753 5899988654322 34456899999999999999999999988654 4689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ...+++.+++.|+.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 112 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred cCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 99999999999643 35799999999999999999999998 999999999999999999999999999976432110
Q ss_pred ----------cccccccCC---CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHH-HHHHHHhcCCCCcccccCcc
Q 005734 547 ----------VSDDIENSV---LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIE-KWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 547 ----------~~~~~~~~~---~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 612 (680)
.....|+.. ....++.++||||||+++|||+||+.||......+.. ..+..... .+.
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~---------~~~ 258 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA---------SPD 258 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCC---------CCC
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCC---------Ccc
Confidence 011112221 1345677899999999999999999999764432222 22221111 111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
+......++..+.+++.+||+.+|++||++.||++.|+.+....+
T Consensus 259 ~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp STTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred hhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 222223344689999999999999999999999999999876654
No 38
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.9e-38 Score=328.65 Aligned_cols=252 Identities=18% Similarity=0.306 Sum_probs=190.2
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC--CceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP--FNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lV~ 465 (680)
.+.||+|+||+||+|+.. ++.||||++.... .....+..|+.++++++|||||++++++..... ...++||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD------KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCc------hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 389999999999999886 7899999986432 233456679999999999999999999987542 1368999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------CCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL-------NPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~-------~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
||+++|+|.++++.. .++|..+.+|+.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||++
T Consensus 102 e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 102 AFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred ecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 999999999999653 4899999999999999999999862 448999999999999999999999999999
Q ss_pred cccCCCCCcc-----cccccCCCC----------CCCCCCCCeeehhHHHHHHHhCCCCCCccccc-------------c
Q 005734 539 TIALPKSKVS-----DDIENSVLP----------PLADPETNIYSFGILMLEIISGKLPYCEEKEL-------------S 590 (680)
Q Consensus 539 ~~~~~~~~~~-----~~~~~~~~~----------~~~s~~sDVySfGvvllElltG~~p~~~~~~~-------------~ 590 (680)
+......... ...+.+..| ..++.++|||||||++|||+||+.||.+..+. .
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 8765322111 111222222 13345689999999999999999999753221 1
Q ss_pred HHHHHHHHhcCCCCcccccCcccCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 591 IEKWAADYLNEPRNFSCMIDPSLKS--FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
...+....... . ..+.+.. .....+.++.+++.+||+.||++|||++||+++|+++...
T Consensus 259 ~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 259 LEDMQEVVVHK-K-----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHHHHHTTS-C-----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcc-c-----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11222211111 0 1111111 1234567799999999999999999999999999998654
No 39
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.3e-38 Score=330.50 Aligned_cols=250 Identities=15% Similarity=0.264 Sum_probs=189.8
Q ss_pred ccccCCCCCCeEEEEEe-----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||+||+|++ .+|+.||||++.... ....+.|.+|++++++++||||++++++|...+....+
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 48999999999999984 368899999986443 33456799999999999999999999999654322469
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++.... ..+++..+++++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 90 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999997543 3589999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc------------cHHHHHHHHh
Q 005734 543 PKSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL------------SIEKWAADYL 599 (680)
Q Consensus 543 ~~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~------------~~~~~~~~~~ 599 (680)
...... ...|+......+++++||||||+++|||+||..|+...... ..........
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence 321110 11233223345788999999999999999999998643210 0001111111
Q ss_pred cCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 600 NEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 600 ~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
..... ...+..++.++.+++.+||+.||++|||++|++++|+++.+.
T Consensus 246 ~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 246 KNNGR---------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HTTCC---------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hccCc---------CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 11111 011233447899999999999999999999999999998754
No 40
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-38 Score=334.19 Aligned_cols=247 Identities=15% Similarity=0.256 Sum_probs=194.3
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+.. +++.||||++..... ....+.|.+|++++++++||||++++++|.+.+ ..
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~ 125 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS----ADMQADFQREAALMAEFDNPNIVKLLGVCAVGK--PM 125 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SC
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC----HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC--ce
Confidence 389999999999999974 347899999864432 334567999999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005734 462 MMVFEYAPNGTVFEHLHIKE----------------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSS 519 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~----------------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp 519 (680)
++||||+++|+|.+++.... ...+++.+++.|+.++++||+|||+. +|+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCc
Confidence 99999999999999997532 25799999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccc
Q 005734 520 HCIYLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKE 588 (680)
Q Consensus 520 ~NILld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~ 588 (680)
+|||+++++.+||+|||+++........ ....|+......++.++||||||+++|||+| |+.||.+...
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 9999999999999999999765422110 0112222223457889999999999999999 9999976543
Q ss_pred ccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 589 LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
..+...+. .. .. ...+...+.++.+++.+||+.||++||++.+|++.|+++....
T Consensus 283 ~~~~~~~~---~~-~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 283 EEVIYYVR---DG-NI---------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp HHHHHHHH---TT-CC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred HHHHHHHh---CC-Cc---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 33332222 11 10 0111223367899999999999999999999999999987543
No 41
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=322.09 Aligned_cols=249 Identities=19% Similarity=0.285 Sum_probs=187.4
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||+||+|+.. ++.||||++... ...+.|.+|++++++++||||++++|++.+ ..++||||
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~lv~e~ 80 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-------SERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLVMEY 80 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST-------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT----TTEEEEEC
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh-------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----CcEEEEEc
Confidence 489999999999999985 788999988532 234679999999999999999999999874 34899999
Q ss_pred cCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC-eEEcccccccccCCCC
Q 005734 468 APNGTVFEHLHIKEM-DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA-AKVAEICFTTIALPKS 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~-~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~-~ki~DFGla~~~~~~~ 545 (680)
+++|+|.+++..... ..+++..+++++.++++||+|||+....+|+||||||+||+++.++. +||+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~ 160 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM 160 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc
Confidence 999999999975432 35789999999999999999999943348999999999999998876 7999999997654322
Q ss_pred Cc-----ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 546 KV-----SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 546 ~~-----~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
.. ....|+......++.++||||||+++|||+||+.||....... .......... .. . ......
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~-~~-~--------~~~~~~ 229 (307)
T 2eva_A 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA-FRIMWAVHNG-TR-P--------PLIKNL 229 (307)
T ss_dssp ----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH-HHHHHHHHTT-CC-C--------CCBTTC
T ss_pred ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH-HHHHHHHhcC-CC-C--------Cccccc
Confidence 11 1222344444567889999999999999999999997543221 1111111111 00 0 011122
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCC
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~ 659 (680)
+..+.+++.+||+.||++|||++++++.|+.+....+..
T Consensus 230 ~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 268 (307)
T 2eva_A 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA 268 (307)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCT
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCC
Confidence 357889999999999999999999999999997655443
No 42
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.7e-37 Score=322.69 Aligned_cols=235 Identities=18% Similarity=0.295 Sum_probs=187.4
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|.. .+|+.||||++...... ..+.+.+|+.++++++|||||++++++..++ ..++||||
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 98 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEY 98 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeeccccc-----HHHHHHHHHHHHhcCCCCCCCeEeEEEEECC--EEEEEEEC
Confidence 7899999999999996 57899999998654322 2356889999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... .+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (297)
T ss_dssp CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc
Confidence 9999999999653 589999999999999999999998 9999999999999999999999999999876533221
Q ss_pred c--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...|+......+++++|||||||++|||+||+.||...........+...... .. ..+..
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~---------~~~~~ 241 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP--EL---------QNPEK 241 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC--CC---------SCGGG
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CC---------CCccc
Confidence 1 11233333456788999999999999999999999765433222222211111 00 01122
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 3367889999999999999999999986
No 43
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-38 Score=338.12 Aligned_cols=252 Identities=16% Similarity=0.299 Sum_probs=188.3
Q ss_pred ccccCCCCCCeEEEEEeC--CC--CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS--SG--VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~--~g--~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|+.. ++ ..||||.+..... ....++|.+|++++++++|||||+++++|...+. ..++
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~~l 168 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD----IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLV 168 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC----SHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS-CCEE
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC----HHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC-CeEE
Confidence 478999999999999873 33 3578887754321 2345689999999999999999999999865432 4689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 169 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp EEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccc
Confidence 99999999999999643 34689999999999999999999998 999999999999999999999999999986542
Q ss_pred CCCcc------------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 544 KSKVS------------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 544 ~~~~~------------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
..... ...|+......+++++|||||||++|||+| |..||......+....+...... .
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~-------~- 316 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------L- 316 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCC-------C-
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCC-------C-
Confidence 21110 111222223467889999999999999999 67778765544544433221110 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCCCC
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAV 661 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~~~ 661 (680)
.+..++.++.+++.+||+.+|++||+++|+++.|+++.........
T Consensus 317 -----~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~ 362 (373)
T 3c1x_A 317 -----QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 362 (373)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCB
T ss_pred -----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccce
Confidence 1112336789999999999999999999999999999876655443
No 44
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5.7e-38 Score=320.82 Aligned_cols=250 Identities=15% Similarity=0.329 Sum_probs=192.3
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|+.. |..||||++...... ....+.|.+|++++++++||||+++++++.+......++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWS---TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHW 90 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCC---HHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEEC
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccC---HHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecc
Confidence 489999999999999985 888999998764322 3445679999999999999999999999987733367999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.......+++..++.|+.|++.||+|||+. .++|+||||||+||++++++.++|+|||++.........
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 169 (271)
T 3kmu_A 91 MPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRM 169 (271)
T ss_dssp CTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTCB
T ss_pred cCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeecccCcc
Confidence 9999999999866555799999999999999999999987 223999999999999999999999999887654322211
Q ss_pred ---ccccccCCCCCC---CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 548 ---SDDIENSVLPPL---ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 548 ---~~~~~~~~~~~~---~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
....|+...... .+.++||||||+++|||+||+.||.+........ ........ + ..+....
T Consensus 170 ~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~~~~------~---~~~~~~~ 237 (271)
T 3kmu_A 170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM---KVALEGLR------P---TIPPGIS 237 (271)
T ss_dssp SCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH---HHHHSCCC------C---CCCTTCC
T ss_pred CCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH---HHHhcCCC------C---CCCCCCC
Confidence 111222222222 2337999999999999999999997654332222 22211110 0 0112223
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 622 EAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.++.+++.+||+.||++|||++|+++.|+++.+
T Consensus 238 ~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 238 PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 678999999999999999999999999998754
No 45
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8.5e-38 Score=322.19 Aligned_cols=243 Identities=17% Similarity=0.313 Sum_probs=191.2
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|...++..||||++...... .+++.+|++++.+++||||+++++++.+.+ ..++||||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 100 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS------EDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIITEY 100 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBC------HHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEECC
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC------HHHHHHHHHHHhcCCCCCEeeEEEEEecCC--CeEEEEec
Confidence 3899999999999999998889999998754321 356899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.... ..+++..++.++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 101 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 176 (283)
T 3gen_A 101 MANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176 (283)
T ss_dssp CTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH
T ss_pred cCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccc
Confidence 99999999997532 4699999999999999999999998 9999999999999999999999999999876422110
Q ss_pred ---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 548 ---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 548 ---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
....|+......+++++||||||+++|||+| |+.||...........+...... . . +
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---~----~------~ 243 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL---Y----R------P 243 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC---C----C------C
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCC---C----C------C
Confidence 1112232223456889999999999999999 99999765433333322221111 0 0 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
......+.+++.+||+.+|++|||++++++.|+++.+.
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 11125788999999999999999999999999998753
No 46
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=340.05 Aligned_cols=246 Identities=18% Similarity=0.269 Sum_probs=192.2
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+.. ++..||||++..... .....++.+|+.++++++|||||++++++.+.. ..
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~ 149 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS----EQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--PR 149 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--CC
Confidence 489999999999999953 467899999864322 234567899999999999999999999998877 56
Q ss_pred EEEEEecCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeEEc
Q 005734 462 MMVFEYAPNGTVFEHLHIKE-----MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY---AAKVA 533 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~-----~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---~~ki~ 533 (680)
++||||+++|+|.+++.... ...+++.+++.|+.|+++||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997432 24699999999999999999999998 999999999999999544 59999
Q ss_pred ccccccccCCCCC-----c-----ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCC
Q 005734 534 EICFTTIALPKSK-----V-----SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 534 DFGla~~~~~~~~-----~-----~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
|||+++....... . ....|+......+++++|||||||++|||+| |+.||.......+...+......
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~- 305 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM- 305 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC-
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-
Confidence 9999986431110 0 1112332223457889999999999999998 99999875544433333221111
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
..+.....++.+++.+||+.+|++||++.+|++.|+.+...
T Consensus 306 ------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 306 ------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp ------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ------------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 01112236788999999999999999999999999988653
No 47
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.5e-38 Score=322.42 Aligned_cols=243 Identities=18% Similarity=0.288 Sum_probs=192.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|...++..||||++...... ..++.+|++++.+++||||+++++++.+.+ ..++||||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 84 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS------EDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--PIYIVTEY 84 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC------HHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEEEC
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCc------HHHHHHHHHHHHhCCCCCEeeEEEEEccCC--ceEEEEEc
Confidence 3899999999999999998889999998654321 346899999999999999999999998777 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ...+++..++.|+.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 85 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 160 (268)
T 3sxs_A 85 ISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160 (268)
T ss_dssp CTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE
T ss_pred cCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhh
Confidence 9999999999643 23589999999999999999999998 9999999999999999999999999999876533211
Q ss_pred c---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 548 S---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 548 ~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
. ...|+......+++++||||||++++||+| |+.||........... ....... ..+
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~---~~~~~~~----~~~------ 227 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK---VSQGHRL----YRP------ 227 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH---HHTTCCC----CCC------
T ss_pred cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHH---HHcCCCC----CCC------
Confidence 1 111222222346789999999999999999 9999976543322222 2211110 011
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.....++.+++.+||+.+|++|||++|+++.|+.+.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 11225788999999999999999999999999988653
No 48
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.6e-38 Score=326.74 Aligned_cols=245 Identities=15% Similarity=0.275 Sum_probs=198.6
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.+.||+|+||.||+|... ++..||||++.... ...+.|.+|++++++++||||+++++++.+.+ ..++||
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~ 88 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIIT 88 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS------THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEE
T ss_pred EEeecCCCCceeEEEeEecCCCEEEEEEecCcCH------HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CEEEEE
Confidence 3489999999999999986 58889999986433 23467899999999999999999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++.......+++..++.++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 999999999999876666799999999999999999999998 99999999999999999999999999998765332
Q ss_pred Ccc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 546 KVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 546 ~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
... ...|+......++.++||||||+++|||+| |+.||.........+.+.......
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~------------- 232 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME------------- 232 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC-------------
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCC-------------
Confidence 211 112222223456889999999999999999 999998655444444433221110
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+...+.++.+++.+|++.||++|||+.++++.|+++...
T Consensus 233 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 1122236789999999999999999999999999988653
No 49
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.5e-37 Score=316.76 Aligned_cols=247 Identities=22% Similarity=0.369 Sum_probs=188.7
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHH--HHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLK--SQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
.+.||+|+||+||+|+. .+++.||||++.......... ...+.|.+|++++++++||||+++++++.+.. ++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~lv 99 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP----RMV 99 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT----EEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC----eEE
Confidence 48999999999999997 478999999986544322111 11167999999999999999999999997644 799
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeecCCCC-----eEEccccc
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPP--VAHSNLSSHCIYLTDDYA-----AKVAEICF 537 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld~~~~-----~ki~DFGl 537 (680)
|||+++|+|.+++... ...+++..++.++.+++.||+|||+. + |+||||||+||+++.++. +||+|||+
T Consensus 100 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 100 MEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp EECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred EEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 9999999999988644 34799999999999999999999998 6 999999999999988776 99999999
Q ss_pred ccccCCCCCcc-----cccccCC--CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 538 TTIALPKSKVS-----DDIENSV--LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 538 a~~~~~~~~~~-----~~~~~~~--~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
++......... ...|+.. ....+++++||||||+++|||+||+.||........ ........... .
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~--~---- 248 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFINMIREEGL--R---- 248 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-HHHHHHHHSCC--C----
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-HHHHHHhccCC--C----
Confidence 98654322211 1223332 223357789999999999999999999976542222 22222211110 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
+ ..+.....++.+++.+||+.||++|||++|+++.|+++
T Consensus 249 ~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 249 P---TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp C---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred C---CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0 11122346789999999999999999999999999874
No 50
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=8.7e-38 Score=324.86 Aligned_cols=244 Identities=18% Similarity=0.325 Sum_probs=182.0
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHc--CCCCcccceeeEEecCC--CCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSR--INHKNFVNLIGYCEDDE--PFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~--~~~~~l 463 (680)
.+.||+|+||+||+|+. +|+.||||++.... ...+.+|.+++.. ++||||+++++++.... ....++
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--------~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--------EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--------HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEecccc--------chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 38999999999999998 68899999985432 2345566666666 79999999999976532 124689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMH--------HELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH--------~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
||||+++|+|.++++. ..+++..+++|+.+++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 84 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred ehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999999953 36999999999999999999999 55 9999999999999999999999999
Q ss_pred ccccccCCCCCcc-------cccccCCCC-----C------CCCCCCCeeehhHHHHHHHhC----------CCCCCccc
Q 005734 536 CFTTIALPKSKVS-------DDIENSVLP-----P------LADPETNIYSFGILMLEIISG----------KLPYCEEK 587 (680)
Q Consensus 536 Gla~~~~~~~~~~-------~~~~~~~~~-----~------~~s~~sDVySfGvvllElltG----------~~p~~~~~ 587 (680)
|+++......... ...+.+.+| . .+++++|||||||++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9997654322111 111222222 2 234689999999999999999 88885432
Q ss_pred c--ccHHHHHHHHhcCCCCcccccCcccC--CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 588 E--LSIEKWAADYLNEPRNFSCMIDPSLK--SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 588 ~--~~~~~~~~~~~~~~~~~~~~~d~~l~--~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
. ..... .......... .+.+. ........++.+++.+||+.||++|||+.||++.|+++
T Consensus 238 ~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDPSFED-MRKVVCVDQQ-----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSCCHHH-HHHHHTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcchhh-hhHHHhccCC-----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1 12222 2222211111 11111 12345678899999999999999999999999999976
No 51
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=5.8e-38 Score=334.91 Aligned_cols=251 Identities=17% Similarity=0.277 Sum_probs=193.6
Q ss_pred hhhhc--cccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEe
Q 005734 384 CEDFS--NIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCE 454 (680)
Q Consensus 384 ~~~~~--~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~ 454 (680)
.++|. +.||+|+||.||+|+. .+++.||||++..... ....+.|.+|++++.++ +|||||+++++|.
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 96 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLGACT 96 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC----HHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence 34454 8999999999999974 3568899999864332 23456799999999999 7999999999998
Q ss_pred cCCCCceEEEEEecCCCChhhhhccCCC----------------------------------------------------
Q 005734 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEM---------------------------------------------------- 482 (680)
Q Consensus 455 ~~~~~~~~lV~ey~~~GsL~~~l~~~~~---------------------------------------------------- 482 (680)
+.+. ..++||||+++|+|.++++....
T Consensus 97 ~~~~-~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (359)
T 3vhe_A 97 KPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD 175 (359)
T ss_dssp STTS-CCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred cCCC-ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence 7653 36999999999999999975431
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCcc--
Q 005734 483 ------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-- 548 (680)
Q Consensus 483 ------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~~-- 548 (680)
..+++..+++|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 252 (359)
T 3vhe_A 176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252 (359)
T ss_dssp --------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC
T ss_pred hhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhc
Confidence 1289999999999999999999998 99999999999999999999999999998764322111
Q ss_pred --------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccccc-HHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 549 --------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELS-IEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 549 --------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
...|+......++.++|||||||++|||+| |+.||.+..... ....+...... . .+.
T Consensus 253 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~--~-----------~~~ 319 (359)
T 3vhe_A 253 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--R-----------APD 319 (359)
T ss_dssp --CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCC--C-----------CCT
T ss_pred cccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCC--C-----------CCC
Confidence 112222223457889999999999999999 999997644222 22222211110 0 111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
....++.+++.+||+.||++||||+||+++|+++...
T Consensus 320 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 320 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 1235789999999999999999999999999998753
No 52
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.9e-37 Score=325.33 Aligned_cols=236 Identities=18% Similarity=0.290 Sum_probs=187.9
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+. .+|+.||||++...... ....+.+.+|++++++++||||+++++++...+ ..++||||
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~e~ 95 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN---PTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--TLYLIMEY 95 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEEEEEC
Confidence 8999999999999997 58999999998654321 334567889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 96 ~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 96 ASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 9999999999644 3689999999999999999999998 9999999999999999999999999999876533221
Q ss_pred c--cccccCCC-----CC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--DDIENSVL-----PP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--~~~~~~~~-----~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...+.+.+ .. +.++++||||+||++|||+||+.||.+.....+.. .......... ..
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~---~i~~~~~~~p-----------~~ 236 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE---RVLRGKYRIP-----------FY 236 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHCCCCCC-----------TT
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHH---HHHhCCCCCC-----------CC
Confidence 1 11122222 22 33578999999999999999999998754333332 2222211111 11
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+++.+|++.||++|||++|+++.
T Consensus 237 ~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 237 MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp SCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 22578899999999999999999999864
No 53
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2e-37 Score=324.08 Aligned_cols=245 Identities=18% Similarity=0.283 Sum_probs=194.6
Q ss_pred ccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+. .++..||||++..... ....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~ 101 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS----PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PL 101 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SC
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC----HHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--ce
Confidence 38899999999999986 3457899999864331 344567999999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005734 462 MMVFEYAPNGTVFEHLHIKEM----------------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSS 519 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~----------------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp 519 (680)
++||||+++|+|.+++..... ..+++..+++++.++++||+|||+. +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999975432 3489999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccc
Q 005734 520 HCIYLTDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKE 588 (680)
Q Consensus 520 ~NILld~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~ 588 (680)
+||++++++.+||+|||+++......... ...|+......+++++||||||+++|||+| |+.||.+...
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999999998764322111 111222222346788999999999999999 9999987654
Q ss_pred ccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 589 LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+...+...... ..+.....++.+++.+||+.||++||++.|+++.|+++..
T Consensus 259 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 ERLFNLLKTGHRM-------------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp GGHHHHHHTTCCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCcC-------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 4444443321111 0111223678999999999999999999999999999865
No 54
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.7e-38 Score=355.28 Aligned_cols=246 Identities=15% Similarity=0.268 Sum_probs=196.7
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||.||+|+..++..||||++..... ..++|.+|+++|++++|+|||+++++|.+ + ..++|||
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~--~~~lv~e 341 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTE 341 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEEC
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c--cceEeee
Confidence 3489999999999999998888899999865331 13579999999999999999999999976 3 4699999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|.++++......+++.++++|+.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 99999999999754445699999999999999999999998 999999999999999999999999999987642110
Q ss_pred ---------cccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 ---------VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ---------~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.....|+......++.++|||||||++|||+| |+.||.+....++...+....+. ..
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~-------------~~ 485 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-------------PC 485 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCC-------------CC
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------CC
Confidence 01122333333467889999999999999999 99999865433333333221111 01
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
+..+..++.+|+.+||+.||++|||+++|++.|+++.....
T Consensus 486 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 486 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 12234678999999999999999999999999999865443
No 55
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6.8e-38 Score=329.41 Aligned_cols=254 Identities=15% Similarity=0.270 Sum_probs=185.1
Q ss_pred ccccCCCCCCeEEEEEeCCC----CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC----
Q 005734 388 SNIIDTQSGCTIYKGTLSSG----VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF---- 459 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g----~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~---- 459 (680)
.+.||+|+||.||+|+.... ..||||++...... ....++|.+|++++++++||||+++++++......
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA---SSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLP 104 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC---------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccC---HHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCC
Confidence 48999999999999997533 27999988654311 23456799999999999999999999999876521
Q ss_pred ceEEEEEecCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIK----EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~----~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
..++|+||+++|+|.+++... ....+++..+++|+.|+++||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 105 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 105 IPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCC
T ss_pred ccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEeec
Confidence 128999999999999999643 223699999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCC
Q 005734 536 CFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRN 604 (680)
Q Consensus 536 Gla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 604 (680)
|+++......... ...|+......++.++||||||+++|||+| |+.||...........+......
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~--- 258 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRL--- 258 (323)
T ss_dssp CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---
T ss_pred cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCC---
Confidence 9998764322111 111222223457889999999999999999 99999876544444433221111
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCCC
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQA 660 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~~ 660 (680)
..+.....++.+++.+||+.||++|||+.++++.|+++..-.....
T Consensus 259 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~ 304 (323)
T 3qup_A 259 ----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304 (323)
T ss_dssp ----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred ----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence 0112223678999999999999999999999999999987655443
No 56
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.4e-38 Score=323.64 Aligned_cols=247 Identities=17% Similarity=0.270 Sum_probs=193.1
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|...++..||||++..... ..+.|.+|++++++++||||+++++++.++ ..++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~e~ 88 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM------SPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIITEY 88 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEEEC
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc------cHHHHHHHHHHHHhCCCcCcceEEEEEcCC---CcEEEEec
Confidence 489999999999999998888999998864331 235689999999999999999999998754 46899999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.......+++..+++++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence 9999999999654334699999999999999999999998 9999999999999999999999999999876532211
Q ss_pred c---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 548 S---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 548 ~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
. ...|+......++.++||||||++++||+| |+.||.+.........+...... ..+
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~-------------~~~ 232 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRP 232 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC-------------CCC
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC-------------CCc
Confidence 1 111222222345778999999999999999 99999765433333322211110 011
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCC
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~ 659 (680)
.....++.+++.+|++.+|++|||+.++++.|+++......+
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 274 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQ 274 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC---
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCC
Confidence 122367899999999999999999999999999997655443
No 57
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.9e-37 Score=318.12 Aligned_cols=251 Identities=17% Similarity=0.275 Sum_probs=194.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. ++..||||++....... ....+.|.+|++++.+++||||+++++++.+++ ..++|||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 91 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK--EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD--CYYLVME 91 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCC--HHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCcccc--HHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC--eEEEEEe
Confidence 389999999999999964 78999999986543222 344568999999999999999999999998877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 92 ~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 92 YIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp CCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred CCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 99999999999644 3699999999999999999999998 999999999999999999999999999987643211
Q ss_pred c---------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 547 V---------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 547 ~---------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
. ....|+......+++++||||||+++|||+||+.||.+.... ........... ... .. ...
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~---~~~~~~~~~~~--~~~-~~---~~~ 237 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV---SIAIKHIQDSV--PNV-TT---DVR 237 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH---HHHHHHHSSCC--CCH-HH---HSC
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHhhccC--CCc-ch---hcc
Confidence 1 111233333456788999999999999999999999765422 22222222211 000 00 111
Q ss_pred HHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhhccC
Q 005734 618 QNELEAICEVIKECIKTDLRQRP-TMNDIIVQLRQVINIS 656 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RP-tm~ev~~~L~~i~~~~ 656 (680)
...+..+.+++.+|++.||++|| +++++.+.|+.+....
T Consensus 238 ~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 238 KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 22346789999999999999999 8999999999886543
No 58
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=354.99 Aligned_cols=240 Identities=15% Similarity=0.279 Sum_probs=191.7
Q ss_pred ccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 390 IIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.||+|+||.||+|... ++..||||+++.... ....++|.+|+++|++++|||||+++|+|..+ ..++|||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~---~~~lv~E 415 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE----KADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVME 415 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS----STTHHHHHHHHHHHTTCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC---CeEEEEE
Confidence 7999999999999874 566799999875432 12356799999999999999999999999863 4799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|.+++... ...+++..++.|+.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 416 ~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 416 MAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp CCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred eCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 99999999999643 35699999999999999999999998 999999999999999999999999999987643211
Q ss_pred c-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 547 V-----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 547 ~-----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
. ....|+......++.++|||||||++|||+| |+.||.+....++...+....+ .
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~----~--------- 558 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR----M--------- 558 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCC----C---------
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC----C---------
Confidence 1 1112222223467889999999999999998 9999987654444443332111 1
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
..+..++.++.+++.+||+.+|++||+|.+|++.|+.+.
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 112234478999999999999999999999999999884
No 59
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.5e-37 Score=324.90 Aligned_cols=249 Identities=17% Similarity=0.305 Sum_probs=194.3
Q ss_pred ccccCCCCCCeEEEEEeC--------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCC
Q 005734 388 SNIIDTQSGCTIYKGTLS--------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEP 458 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~--------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 458 (680)
.+.||+|+||.||+|+.. ++..||||++..... ....+.+.+|+++++++ +||||++++++|.+.+
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~- 114 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT----EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG- 114 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc----HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC-
Confidence 489999999999999863 567899999864432 33456799999999999 8999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIKEM--------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~~~--------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl 524 (680)
..++||||+++|+|.+++..... ..+++..+++++.++++||+|||+. +|+||||||+||++
T Consensus 115 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 115 -PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp -CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred -ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 67999999999999999975431 3489999999999999999999998 99999999999999
Q ss_pred cCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHH
Q 005734 525 TDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEK 593 (680)
Q Consensus 525 d~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~ 593 (680)
+.++.+||+|||+++......... ...|+......++.++||||||+++|||+| |+.||.+.....+..
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 270 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHH
Confidence 999999999999998765322111 111222222346788999999999999999 999997654333333
Q ss_pred HHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 594 WAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 594 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
.+...... ..+.....++.+++.+||+.+|++||++.|+++.|+++....+.
T Consensus 271 ~~~~~~~~-------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 271 LLKEGHRM-------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp HHHHTCCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHhcCCCC-------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 33221111 01112236789999999999999999999999999999776544
No 60
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.3e-37 Score=333.04 Aligned_cols=259 Identities=11% Similarity=0.140 Sum_probs=189.9
Q ss_pred ccccCCCCCCeEEEEEeCC------CCEEEEEEeeeccchhhH------HHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 388 SNIIDTQSGCTIYKGTLSS------GVEIAVAATAITSSKDWL------KSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~------g~~vaVK~~~~~~~~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
.+.||+|+||.||+|...+ ++.||||++......... ......+..|+..+.+++|+||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 3899999999999999854 478999998654321111 0111245667778889999999999999976
Q ss_pred CCC--CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec--CCCCeE
Q 005734 456 DEP--FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT--DDYAAK 531 (680)
Q Consensus 456 ~~~--~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld--~~~~~k 531 (680)
... ...++||||+ +|+|.+++... ...+++..++.|+.|++.||+|||+. +|+||||||+|||++ .++.+|
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~~~~k 194 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVY 194 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCTTCEE
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCCCeEE
Confidence 421 2479999999 99999999753 35799999999999999999999998 999999999999999 889999
Q ss_pred EcccccccccCCCCCc---------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHH
Q 005734 532 VAEICFTTIALPKSKV---------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWA 595 (680)
Q Consensus 532 i~DFGla~~~~~~~~~---------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~ 595 (680)
|+|||+++........ ....|+......++.++|||||||++|||+||+.||.+... .......
T Consensus 195 l~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~ 274 (364)
T 3op5_A 195 LVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDS 274 (364)
T ss_dssp ECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHH
T ss_pred EEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHH
Confidence 9999999876422111 11123333344578889999999999999999999985321 2222222
Q ss_pred HHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 596 ADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 596 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
...... .+..++++.+. ....+.++.+++..||+.+|++||++++|++.|+++...
T Consensus 275 ~~~~~~--~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 275 KIRYRE--NIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp HHHHHH--CHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhhh--hHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 221111 12222222221 012236789999999999999999999999999998653
No 61
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.8e-37 Score=325.77 Aligned_cols=236 Identities=15% Similarity=0.272 Sum_probs=183.8
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+. .+|+.||||++...... .....+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~----~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~--~~~lv~E 88 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG----SDLPRIKTEIEALKNLRHQHICQLYHVLETAN--KIFMVLE 88 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-------CCHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC--EEEEEEe
Confidence 38999999999999996 57899999998654322 22456889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++........
T Consensus 89 ~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 89 YCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 999999999996443 699999999999999999999998 999999999999999999999999999876543211
Q ss_pred c---------ccccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 V---------SDDIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~---------~~~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
. ....|+..... +.+.++||||+||++|||+||+.||.+.....+... .........
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~---i~~~~~~~p---------- 230 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKK---IMRGKYDVP---------- 230 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHHTCCCCC----------
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH---HHcCCCCCC----------
Confidence 1 11123322222 348889999999999999999999986543333332 222211111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+||+.||++|||++|+++.
T Consensus 231 -~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 231 -KWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -CCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1122567899999999999999999999975
No 62
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2e-37 Score=319.28 Aligned_cols=243 Identities=15% Similarity=0.257 Sum_probs=183.4
Q ss_pred ccccCCCCCCeEEEEEeCC----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSS----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|.... +..||||+...... ....+.|.+|+.++++++||||+++++++.++ ..++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~l 92 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS----DSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PVWI 92 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS---SCEE
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC----HHHHHHHHHHHHHHHhCCCCccceEEEEEccC---ccEE
Confidence 4899999999999998742 45688888754321 33456799999999999999999999998543 4689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ...+++..++.++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 93 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCc
Confidence 99999999999999744 34689999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 544 KSKVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 544 ~~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
..... ...|+......++.++||||||+++|||+| |+.||......+....+......
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~------------ 236 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------------ 236 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC------------
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCC------------
Confidence 22111 112222223456788999999999999997 99999866544444433321110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+...+.++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 237 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 237 -PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0112233678899999999999999999999999999864
No 63
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-37 Score=318.81 Aligned_cols=254 Identities=17% Similarity=0.285 Sum_probs=195.0
Q ss_pred cccCCCCCCeEEEEEeC-CC---CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SG---VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g---~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
++||+|+||+||+|+.. ++ ..+|||++..... ....+.|.+|++++++++||||+++++++.+.+. ..++|
T Consensus 27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v 101 (298)
T 3pls_A 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE----MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG-LPHVL 101 (298)
T ss_dssp EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS----HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEEE
T ss_pred ceeccCCCceEEEEEEecCCCceeeeeeeecccccc----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC-CcEEE
Confidence 78999999999999863 22 3689998754321 2345679999999999999999999999986652 34899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
+||+.+|+|.+++... ...+++..+..|+.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999753 35789999999999999999999998 9999999999999999999999999999865422
Q ss_pred CCc------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCC-CCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 545 SKV------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLP-YCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 545 ~~~------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
... ....|+......+++++||||||+++|||+||..| |......+....+.......
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--------- 248 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP--------- 248 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCC---------
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCC---------
Confidence 110 01112333344678899999999999999996555 44444344444333221110
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCCCCCCC
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRL 664 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~~~~~~ 664 (680)
.+.....++.+++.+||+.+|++|||+++++++|+++..........++
T Consensus 249 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~~~~l 297 (298)
T 3pls_A 249 ----QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHYVQL 297 (298)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCCBCCC
T ss_pred ----CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccchhhC
Confidence 0111236789999999999999999999999999999876655544443
No 64
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.1e-37 Score=320.16 Aligned_cols=249 Identities=14% Similarity=0.176 Sum_probs=188.5
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEec
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~ 468 (680)
+.||+|+||+||+|+..+|+.||||++...... ......+.+|++++++++|||||++++++.+++ ..++||||+
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 101 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAED---EGIPSTAIREISLLKELHHPNIVSLIDVIHSER--CLTLVFEFM 101 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC---------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS--CEEEEEECC
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEeccccc---chhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC--EEEEEEcCC
Confidence 899999999999999988999999998654321 223467889999999999999999999998877 679999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCcc
Q 005734 469 PNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS 548 (680)
Q Consensus 469 ~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~~ 548 (680)
+ |+|.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 102 ~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 102 E-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp S-EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred C-CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 7 5888888643 34699999999999999999999998 99999999999999999999999999998764221111
Q ss_pred --------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--cccccC------c
Q 005734 549 --------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCMID------P 611 (680)
Q Consensus 549 --------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~d------~ 611 (680)
...|+.... ..++.++|||||||++|||+||+.||.+....+....+......+.. .....+ .
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence 112332222 45688999999999999999999999876555555444444333211 110000 0
Q ss_pred cc---CC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 612 SL---KS-----FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 612 ~l---~~-----~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.. .. .......++.+++.+|++.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00 00 01122357889999999999999999999986
No 65
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.6e-37 Score=322.03 Aligned_cols=249 Identities=20% Similarity=0.312 Sum_probs=195.7
Q ss_pred hccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCC
Q 005734 387 FSNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 459 (680)
+.+.||+|+||.||+|+. .++..||||++..... ....+.+.+|++++.++ +||||+++++++.+++
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-- 100 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH----LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG-- 100 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh----HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC--
Confidence 348999999999999985 3567899999864432 23456799999999999 8999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEM----------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIY 523 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~----------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 523 (680)
..++||||+++|+|.+++..... ..+++..+++++.++++||+|||+. +|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 66999999999999999975432 2589999999999999999999998 9999999999999
Q ss_pred ecCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccccc-H
Q 005734 524 LTDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELS-I 591 (680)
Q Consensus 524 ld~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~-~ 591 (680)
++.++.+||+|||+++......... ...|+......++.++||||||++++||+| |+.||....... .
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 257 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence 9999999999999998765432211 111222223457888999999999999999 999997654222 2
Q ss_pred HHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 592 EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
...+...... .. +.....++.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 258 ~~~~~~~~~~------~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 258 YKMIKEGFRM------LS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHHHHHTCCC------CC-------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHHhccCCCC------CC-------cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 2222221111 00 11223678999999999999999999999999999876554
No 66
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-37 Score=328.27 Aligned_cols=250 Identities=18% Similarity=0.308 Sum_probs=189.7
Q ss_pred ccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCc
Q 005734 388 SNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 460 (680)
.+.||+|+||.||+|+. .++..||||++..... ....+.+.+|++++.++ +||||+++++++...+ .
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~ 123 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD----SSEREALMSELKMMTQLGSHENIVNLLGACTLSG--P 123 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--S
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC----HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC--c
Confidence 48999999999999996 2456899999864321 23456799999999999 8999999999999877 6
Q ss_pred eEEEEEecCCCChhhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEM---------------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSS 519 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~---------------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp 519 (680)
.++||||+++|+|.+++..... ..+++..++.++.++++||+|||+. +|+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCh
Confidence 7999999999999999975432 3489999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccc
Q 005734 520 HCIYLTDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKE 588 (680)
Q Consensus 520 ~NILld~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~ 588 (680)
+||+++.++.+||+|||+++......... ...|+......+++++||||||+++|||+| |+.||.+...
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 99999999999999999998764322111 112222223457889999999999999998 9999976542
Q ss_pred cc-HHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCC
Q 005734 589 LS-IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659 (680)
Q Consensus 589 ~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~ 659 (680)
.. ....+...... ..+.....++.+++.+||+.||++|||+.++++.|+.+....++.
T Consensus 281 ~~~~~~~~~~~~~~-------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 339 (344)
T 1rjb_A 281 DANFYKLIQNGFKM-------------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339 (344)
T ss_dssp SHHHHHHHHTTCCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred HHHHHHHHhcCCCC-------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHH
Confidence 22 22222211111 011122367899999999999999999999999999987766554
No 67
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.8e-37 Score=323.01 Aligned_cols=246 Identities=20% Similarity=0.344 Sum_probs=189.3
Q ss_pred ccccCCCCCCeEEEEEeCC-----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTLSS-----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~-----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||+|.... +..||||++..... .....+|.+|++++++++||||+++++++.+.+ ..+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 122 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT----EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--PMM 122 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEE
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC----HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--CcE
Confidence 3789999999999998742 23599998864331 334567999999999999999999999998876 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++... ...+++..++.++.++++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 123 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 123 IITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 999999999999999753 34699999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCc-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 543 PKSKV-----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 543 ~~~~~-----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
..... ....|+......++.++||||||+++|||+| |+.||.......+...+...... .
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~----~---- 270 (333)
T 1mqb_A 199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL----P---- 270 (333)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC----C----
T ss_pred cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcC----C----
Confidence 32111 1112333334567888999999999999999 99999765433333322221111 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.+.....++.+++.+||+.+|++||++.++++.|+++....
T Consensus 271 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 271 -----TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp -----CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred -----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 11123367899999999999999999999999999986543
No 68
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.5e-37 Score=318.58 Aligned_cols=249 Identities=16% Similarity=0.299 Sum_probs=190.1
Q ss_pred ccccCCCCCCeEEEEEeCC----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSS----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||+||+|+..+ +..+|||.+..... ....+.|.+|++++++++||||++++++|...+. ..++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~ 104 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD----IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLV 104 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS----HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEE
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCC----HHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC-ceEE
Confidence 3899999999999999642 23578887754321 2345679999999999999999999999865443 5689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ...+++..++.|+.++++||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999643 35689999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcc------------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 544 KSKVS------------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 544 ~~~~~------------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
..... ...|+......+++++||||||++++||+| |..||......+....+...... .
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~----- 252 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL---L----- 252 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCC---C-----
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCC---C-----
Confidence 21111 111222223456888999999999999999 55566554434443333221111 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
.+...+.++.+++.+||+.+|++|||++|++++|+++......
T Consensus 253 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 253 -----QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred -----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 0111235789999999999999999999999999999775543
No 69
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.9e-37 Score=315.09 Aligned_cols=243 Identities=15% Similarity=0.281 Sum_probs=193.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|...++..||||++...... .+++.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 84 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVTEF 84 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC------HHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEEEECC
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCC------HHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CeEEEEeC
Confidence 3889999999999999988889999998654321 356899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|.+++.... ..+++..+.+++.++++||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 85 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 85 MEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp CTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 99999999997543 4689999999999999999999998 999999999999999999999999999987642110
Q ss_pred ----c----ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 547 ----V----SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 547 ----~----~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
. ....|+......+++++||||||+++|||+| |+.||...........+...... .. +
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~-------~~------~ 227 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL-------YK------P 227 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC-------CC------C
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcC-------CC------C
Confidence 0 1112222223456888999999999999999 89999765433333222211110 00 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.....++.+++.+||+.+|++||+++++++.|+++.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11236788999999999999999999999999998753
No 70
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=315.24 Aligned_cols=259 Identities=13% Similarity=0.204 Sum_probs=195.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+.. +|+.||||++...... ...+.+.+|++++++++||||+++++++........++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEecccccc----chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 389999999999999985 5899999998643321 22456789999999999999999999998765445799999
Q ss_pred ecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCCeEEccccccccc
Q 005734 467 YAPNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL----TDDYAAKVAEICFTTIA 541 (680)
Q Consensus 467 y~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~ki~DFGla~~~ 541 (680)
|+++|+|.+++.... ...+++..++.|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 999999999997543 23499999999999999999999998 99999999999999 78888999999999876
Q ss_pred CCCCCcc-------cccccCCC--------CCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhc-CCC-
Q 005734 542 LPKSKVS-------DDIENSVL--------PPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLN-EPR- 603 (680)
Q Consensus 542 ~~~~~~~-------~~~~~~~~--------~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~-~~~- 603 (680)
....... ...|+... ...++.++|||||||++|||+||+.||..... ....+....... .+.
T Consensus 167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~ 246 (319)
T 4euu_A 167 EDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSG 246 (319)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTT
T ss_pred CCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcc
Confidence 5432211 11122211 35678899999999999999999999963221 112222222221 111
Q ss_pred Ccccc---------cCccc---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 604 NFSCM---------IDPSL---KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 604 ~~~~~---------~d~~l---~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
....+ .++.+ ..........+.+++.+|++.||++|||++|+++...+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 00000 00111 1345677788999999999999999999999999887653
No 71
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=5.1e-37 Score=321.24 Aligned_cols=252 Identities=17% Similarity=0.340 Sum_probs=187.7
Q ss_pred ccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC---c
Q 005734 388 SNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF---N 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~---~ 460 (680)
.+.||+|+||.||+|+.. ++..||||++...... ....+.|.+|++++++++||||+++++++.+.... .
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 115 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS---QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK 115 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC---HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------C
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc---hhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcc
Confidence 388999999999999864 3457999998654322 23456799999999999999999999999875421 3
Q ss_pred eEEEEEecCCCChhhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 461 RMMVFEYAPNGTVFEHLHI----KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~----~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
.++||||+++|+|.+++.. .....+++..+++|+.++++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecC
Confidence 4899999999999999843 2345799999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 537 FTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 537 la~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
+++......... ...|+......+++++||||||+++|||+| |+.||...........+......
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---- 268 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRL---- 268 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC----
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCC----
Confidence 998764321111 112222234457888999999999999999 88999765544444433221111
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
..+.....++.+++.+||+.+|++|||+.++++.|+++....++
T Consensus 269 ---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~ 312 (313)
T 3brb_A 269 ---------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312 (313)
T ss_dssp ---------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred ---------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 01112236789999999999999999999999999999876554
No 72
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.8e-37 Score=317.45 Aligned_cols=246 Identities=20% Similarity=0.350 Sum_probs=179.9
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|... |..||||++....... .....+.+.+|++++++++||||+++++++.+++ ..++||||
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 87 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDED-ISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP--NLCLVMEF 87 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CEEEEEC
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCccc-HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--ceEEEEEc
Confidence 489999999999999975 8889999886543221 1223467899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--------CCCeEEccccccc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD--------DYAAKVAEICFTT 539 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--------~~~~ki~DFGla~ 539 (680)
+++|+|.+++.. ..+++..+..++.++++||+|||+....+|+||||||+||+++. ++.+||+|||+++
T Consensus 88 ~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 88 ARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp CTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred CCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 999999999853 36899999999999999999999983333999999999999986 6789999999998
Q ss_pred ccCCCCCcc------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 540 IALPKSKVS------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 540 ~~~~~~~~~------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
......... ...|+......+++++||||||++++||+||+.||.......... .........
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~-------- 233 (271)
T 3dtc_A 165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY---GVAMNKLAL-------- 233 (271)
T ss_dssp -----------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH---HHHTSCCCC--------
T ss_pred ccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---hhhcCCCCC--------
Confidence 654322111 112232223456888999999999999999999997654322221 111111000
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
..+.....++.+++.+||+.+|++|||+.|++++|+++
T Consensus 234 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 234 -PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 01122336789999999999999999999999999864
No 73
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.9e-37 Score=324.85 Aligned_cols=246 Identities=9% Similarity=0.110 Sum_probs=190.9
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+|+. .+|+.||||++..... ...+.+|+++++++ +||||+++++++...+ ..++||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~lv~ 84 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK--YNAMVL 84 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT--EEEEEE
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEeccccc-------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC--ccEEEE
Confidence 38999999999999996 5789999998865432 23588999999999 8999999999999877 779999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC-----eEEcccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA-----AKVAEICFTTI 540 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~-----~ki~DFGla~~ 540 (680)
||+ +|+|.+++... ...+++..++.|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 85 ELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 999 99999999754 34799999999999999999999998 9999999999999998887 99999999987
Q ss_pred cCCCCCc---------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 541 ALPKSKV---------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 541 ~~~~~~~---------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
....... ....|+......++.++|||||||++|||+||+.||.+....+..+............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence 6432211 0111222334456888999999999999999999998654444433333221110000
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
. ...+ ....+ ++.+++.+||+.+|.+||++++|.+.|+++..
T Consensus 240 ~---~~~~---~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 240 P---IEVL---CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp C---HHHH---TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred C---HHHH---hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 0 0000 01123 89999999999999999999999999998853
No 74
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=326.35 Aligned_cols=238 Identities=15% Similarity=0.243 Sum_probs=182.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+. .+|..||||++.... ....++|.+|++++++++|||||++++++.+.+ ..++||||
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~E~ 167 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRG-----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKN--DIVLVMEY 167 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCS-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccc-----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEeC
Confidence 6899999999999997 478999999987643 233567999999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee--cCCCCeEEcccccccccCCCC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL--TDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl--d~~~~~ki~DFGla~~~~~~~ 545 (680)
+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+|||+ ++++.+||+|||+++......
T Consensus 168 ~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 168 VDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp CTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 99999999986432 3689999999999999999999998 99999999999999 667899999999998765432
Q ss_pred Ccc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 546 KVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 546 ~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
... ...|+......++.++|||||||++|||+||+.||.+........ .......... +.....
T Consensus 244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~---~i~~~~~~~~---~~~~~~--- 314 (373)
T 2x4f_A 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN---NILACRWDLE---DEEFQD--- 314 (373)
T ss_dssp BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---HHHHTCCCSC---SGGGTT---
T ss_pred ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHhccCCCC---hhhhcc---
Confidence 211 112333334456788999999999999999999998654333222 2222111111 111111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...++.+++.+|++.||++|||++|+++
T Consensus 315 -~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 -ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp -SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2367899999999999999999999987
No 75
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-36 Score=319.79 Aligned_cols=239 Identities=15% Similarity=0.228 Sum_probs=188.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|..+|+|.+.... .....+.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e 81 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG------TDQVLVKKEISILNIARHRNILHLHESFESME--ELVMIFE 81 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCT------HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCc------ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--EEEEEEE
Confidence 388999999999999975 68899999886442 23456889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--CCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD--DYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--~~~~ki~DFGla~~~~~~ 544 (680)
|+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 82 ~~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 82 FISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred eCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 99999999999643 34699999999999999999999998 9999999999999987 789999999999876543
Q ss_pred CCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 545 SKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 545 ~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.... ...|+......+++++|||||||++|||+||+.||...........+ ......... +...
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i---~~~~~~~~~---~~~~--- 228 (321)
T 1tki_A 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI---MNAEYTFDE---EAFK--- 228 (321)
T ss_dssp CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HHTCCCCCH---HHHT---
T ss_pred CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH---HcCCCCCCh---hhhc---
Confidence 2211 11223333345688999999999999999999999865433333222 222111110 0011
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||+.|+++.
T Consensus 229 -~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 229 -EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp -TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 123578899999999999999999999974
No 76
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=6.4e-37 Score=316.87 Aligned_cols=246 Identities=22% Similarity=0.407 Sum_probs=183.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||+||+|+..+ .||||++...... ....+.|.+|++++++++||||+++++++... ..++||||
T Consensus 29 ~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv~e~ 100 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIVTQW 100 (289)
T ss_dssp EEEEEECSSEEEEEEESSS--EEEEEEESCSSCC---HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEEC
T ss_pred eeEecCCCCeEEEEEEEcC--ceEEEEEeccCCC---HHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC---ccEEEEEe
Confidence 4899999999999998753 5999998755422 34456799999999999999999999987543 46899999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ...+++..+++|+.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 101 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 101 CEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred cCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 9999999999643 35699999999999999999999998 9999999999999999999999999999765421110
Q ss_pred ----------ccccccCCC---CCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-HHHHHHHHhcCCCCcccccCccc
Q 005734 548 ----------SDDIENSVL---PPLADPETNIYSFGILMLEIISGKLPYCEEKELS-IEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 548 ----------~~~~~~~~~---~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
....|+... ...++.++||||||+++|||+||+.||....... +.+.+..... .+.+
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---------~~~~ 247 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL---------SPDL 247 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSC---------CCCT
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhccccc---------Ccch
Confidence 111122221 3456778999999999999999999997643222 2222222111 1112
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
......++.++.+++.+||+.+|++|||+.+++++|+++..
T Consensus 248 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 22223344789999999999999999999999999998764
No 77
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.6e-36 Score=319.12 Aligned_cols=237 Identities=14% Similarity=0.171 Sum_probs=188.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+++.. +|+.||||++...... .......+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~lv~E~ 86 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII--AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVMEY 86 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh--hhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC--EEEEEEeC
Confidence 89999999999999975 6899999998643211 1223456889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ..+++.....++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 87 ~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 161 (337)
T 1o6l_A 87 ANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161 (337)
T ss_dssp CTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc
Confidence 9999999999643 3689999999999999999999998 9999999999999999999999999999864322111
Q ss_pred --------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 --------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 --------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
....|+......++.++|||||||++|||+||+.||.......+.+ ........+ +..
T Consensus 162 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~---~i~~~~~~~-----------p~~ 227 (337)
T 1o6l_A 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE---LILMEEIRF-----------PRT 227 (337)
T ss_dssp BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHCCCCC-----------CTT
T ss_pred ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHH---HHHcCCCCC-----------CCC
Confidence 1122444445567899999999999999999999997654333322 222221111 112
Q ss_pred HHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
...++.+++.+|++.||++|| +++||++.
T Consensus 228 ~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 236788999999999999999 89998764
No 78
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.1e-37 Score=354.00 Aligned_cols=241 Identities=17% Similarity=0.271 Sum_probs=191.2
Q ss_pred cccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.||+|+||.||+|.+. .++.||||+++..... ....++|.+|++++++++|||||+++++|..+ ..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND---PALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGC---GGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CEEEEE
Confidence 57999999999999753 5678999988654321 23356799999999999999999999999754 468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|||++|+|.+++... ..+++..++.|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 449 E~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~ 523 (635)
T 4fl3_A 449 EMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 523 (635)
T ss_dssp ECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--
T ss_pred EccCCCCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCc
Confidence 999999999999643 4689999999999999999999998 99999999999999999999999999998765322
Q ss_pred Ccc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 546 KVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 546 ~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
... ...|+......++.++|||||||++|||+| |+.||.+.....+...+......
T Consensus 524 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~------------ 591 (635)
T 4fl3_A 524 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM------------ 591 (635)
T ss_dssp -----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC------------
T ss_pred cccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC------------
Confidence 110 112222223467889999999999999999 99999876544443333321111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
..+..++.++.+++.+||+.||++||++++|+++|+++.
T Consensus 592 -~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 592 -GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 112233478999999999999999999999999999874
No 79
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.8e-37 Score=326.73 Aligned_cols=242 Identities=17% Similarity=0.272 Sum_probs=186.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCE----EEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVE----IAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~----vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
+.||+|+||+||+|+.. +|.. ||+|.+...... .....+.+|+.++++++|||||+++++|.+. ..++
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~ 91 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR----QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS---SLQL 91 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC----SCBCSCCHHHHHHHTCCCTTBCCEEEEECBS---SEEE
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH----HHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---ccEE
Confidence 89999999999999964 5554 666665432211 1224578899999999999999999999743 4689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+++|+|.+++... ...+++..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 92 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 99999999999999754 34689999999999999999999998 999999999999999999999999999988653
Q ss_pred CCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 544 KSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 544 ~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
..... ...|+......++.++||||||+++|||+| |+.||.+.....+...+....... .
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~--~------- 238 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLA--Q------- 238 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCC--C-------
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCC--C-------
Confidence 32111 111222222457888999999999999999 999998765444444433221110 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
+..+..++.+++.+||+.||++||+++++++.|+.+..
T Consensus 239 ----~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 239 ----PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ----CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ----CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11112357789999999999999999999999999853
No 80
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-37 Score=316.54 Aligned_cols=242 Identities=14% Similarity=0.262 Sum_probs=191.7
Q ss_pred cccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
..||+|+||.||+|+.. ++..||||++..... ....+.+.+|++++++++||||+++++++.. + ..++||
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~ 88 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE----KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E--ALMLVM 88 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-S--SEEEEE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccc----hhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-C--CcEEEE
Confidence 48999999999999863 678899999865432 3446679999999999999999999999954 3 479999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ...+++..+.+++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 89 EMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp ECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 999999999999643 34699999999999999999999998 99999999999999999999999999998765322
Q ss_pred Ccc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 546 KVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 546 ~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
... ...|+......++.++||||||+++|||+| |+.||...........+......
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~------------ 232 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM------------ 232 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC------------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcC------------
Confidence 111 111222222346788999999999999999 99999765543333333221100
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+...+.++.+++.+||+.+|++||++.++++.|+++..
T Consensus 233 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 233 -ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp -CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1112234689999999999999999999999999999854
No 81
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=314.64 Aligned_cols=242 Identities=14% Similarity=0.203 Sum_probs=179.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhh---------------------HHHHHHHHHHHHHHHHcCCCCc
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDW---------------------LKSQEMAYRKQVDTLSRINHKN 445 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~---------------------~~~~~~~f~~E~~~l~~l~H~n 445 (680)
.+.||+|+||.||+|+.. +|+.||||++........ .....+.+.+|++++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 389999999999999974 688999999865432110 0112356899999999999999
Q ss_pred ccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 005734 446 FVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT 525 (680)
Q Consensus 446 iv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 525 (680)
|+++++++.+......++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~ 171 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVG 171 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEC
Confidence 9999999987443367999999999999987642 4699999999999999999999998 999999999999999
Q ss_pred CCCCeEEcccccccccCCCCCc--------ccccccCCCCCC---CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHH
Q 005734 526 DDYAAKVAEICFTTIALPKSKV--------SDDIENSVLPPL---ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKW 594 (680)
Q Consensus 526 ~~~~~ki~DFGla~~~~~~~~~--------~~~~~~~~~~~~---~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~ 594 (680)
.++.+||+|||+++........ ....|+...... .+.++|||||||++|||+||+.||.......+...
T Consensus 172 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~ 251 (298)
T 2zv2_A 172 EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSK 251 (298)
T ss_dssp TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHH
Confidence 9999999999999876532211 111233322211 36678999999999999999999976542222222
Q ss_pred HHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 595 AADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 595 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+ ........ .. .....++.+++.+||+.||++|||+.|+++
T Consensus 252 ~---~~~~~~~~-----~~----~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 252 I---KSQALEFP-----DQ----PDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H---HHCCCCCC-----SS----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H---hcccCCCC-----Cc----cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 2 11111111 00 112257889999999999999999999875
No 82
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.2e-36 Score=315.85 Aligned_cols=249 Identities=10% Similarity=0.104 Sum_probs=191.5
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+|.. .+|+.||||++..... ...+.+|++++.++ +|+|++++++++.+.. ..++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~lv~ 85 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNVLVI 85 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCc--eeEEEE
Confidence 38999999999999996 5789999998864331 23578899999999 7999999999998877 779999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC-----eEEcccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA-----AKVAEICFTTI 540 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~-----~ki~DFGla~~ 540 (680)
||+ +|+|.+++... ...+++..+.+|+.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.
T Consensus 86 e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 86 DLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 999 99999999754 34699999999999999999999998 9999999999999987776 99999999987
Q ss_pred cCCCCCc---------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 541 ALPKSKV---------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 541 ~~~~~~~---------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
....... ....|+......+++++||||||+++|||+||+.||.....................
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~- 239 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS- 239 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH-
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC-
Confidence 6532211 011123333445688899999999999999999999864332222222211110000
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
+.........+.++.+++.+||+.+|++||++++|++.|+++....
T Consensus 240 -----~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 240 -----TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp -----SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -----ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 0000001122368899999999999999999999999999997644
No 83
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.8e-36 Score=316.67 Aligned_cols=251 Identities=13% Similarity=0.140 Sum_probs=189.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +++.||||++...... .....+.+.+|++++++++||||+++++++...+ ..++|+|
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 114 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSS--DPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG--QLYVDMR 114 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGG--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCccccc--CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC--eEEEEEE
Confidence 389999999999999975 7889999998654322 1344577999999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++..++.++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 115 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 115 LINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp CCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred ecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999999999643 3689999999999999999999998 999999999999999999999999999877643211
Q ss_pred ---------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 547 ---------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 547 ---------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.....|+......++.++||||||+++|||+||+.||........ ...+.......... .
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~-------~ 258 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM----GAHINQAIPRPSTV-------R 258 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH----HHHHHSCCCCGGGT-------S
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH----HHHhccCCCCcccc-------C
Confidence 112234444455678899999999999999999999976542222 12222111111111 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhhccCCC
Q 005734 618 QNELEAICEVIKECIKTDLRQRP-TMNDIIVQLRQVINISPE 658 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RP-tm~ev~~~L~~i~~~~~~ 658 (680)
...+.++.+++.+||+.||++|| +++++++.|+++......
T Consensus 259 ~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 259 PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 22235788999999999999999 999999999988665543
No 84
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.6e-37 Score=317.74 Aligned_cols=243 Identities=19% Similarity=0.332 Sum_probs=185.9
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+++.. |+.||||++.... ..+.|.+|++++++++||||+++++++.+... ..++||||
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~e~ 96 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEY 96 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCCC---------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEECC
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecchh-------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC-ceEEEEec
Confidence 389999999999999885 8899999986432 24578999999999999999999999865442 46999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.......+++..+++++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 173 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 173 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccccC
Confidence 9999999999754433489999999999999999999998 9999999999999999999999999998865432211
Q ss_pred cc-----ccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 548 SD-----DIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 548 ~~-----~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
.. ..|+......+++++||||||++++||+| |+.||......+....+..... . ..+...+
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~----------~---~~~~~~~ 240 (278)
T 1byg_A 174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK----------M---DAPDGCP 240 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC----------C---CCCTTCC
T ss_pred CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC----------C---CCcccCC
Confidence 11 12222223456888999999999999999 9999976544444333221110 0 1112233
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 622 EAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 241 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 241 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 6789999999999999999999999999998653
No 85
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=323.09 Aligned_cols=240 Identities=14% Similarity=0.188 Sum_probs=188.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++... +|+.||||++...... .....+.+.+|++++.+++|||||++++++.+.+ ..++|||
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~lv~e 95 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV--ERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFMVVD 95 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcc--cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEe
Confidence 389999999999999975 6889999998643211 1223467889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 96 ~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 96 LLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp CCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 99999999999643 4699999999999999999999998 999999999999999999999999999987653321
Q ss_pred cc-------cccccCCC---CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 VS-------DDIENSVL---PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~~-------~~~~~~~~---~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.. ...|+... ...++.++|||||||++|||+||+.||......................
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~----------- 239 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTY----------- 239 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCC-----------
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCC-----------
Confidence 11 11233322 2346889999999999999999999997544344444433332221111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPT-MNDIIV 647 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPt-m~ev~~ 647 (680)
+.....++.+++.+||+.||++||+ +++|.+
T Consensus 240 p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 240 PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1122367899999999999999998 666653
No 86
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=325.07 Aligned_cols=243 Identities=14% Similarity=0.283 Sum_probs=185.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEE----EEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEI----AVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~v----aVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
+.||+|+||.||+|... +++.+ ++|.+..... ....+.+.+|++++++++||||++++++|..+. .++
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---~~~ 93 (327)
T 3lzb_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS----PKANKEILDEAYVMASVDNPHVCRLLGICLTST---VQL 93 (327)
T ss_dssp EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS----CCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS---EEE
T ss_pred EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC----HHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC---ceE
Confidence 89999999999999964 55555 5555432221 223567899999999999999999999998754 689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+++|+|.+++.... ..+++..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999997543 4699999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 544 KSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 544 ~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
..... ...|+......++.++|||||||++|||+| |+.||.......+...+......+
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---------- 239 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---------- 239 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC----------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC----------
Confidence 21111 111222223457889999999999999999 999998765555544443321110
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+.....++.+++.+||+.||++||++.|+++.|+++...
T Consensus 240 ---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 240 ---QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ---CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ---CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 1112235788999999999999999999999999998743
No 87
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-36 Score=318.06 Aligned_cols=243 Identities=16% Similarity=0.216 Sum_probs=188.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||++... +|..||||++......... ......+.+|++++++++|||||++++++.+.. ..++||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 93 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 93 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEE
Confidence 489999999999999975 6899999998765422110 112457899999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeEEccccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY----AAKVAEICFTTIA 541 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~ki~DFGla~~~ 541 (680)
||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+|||+++++ .+||+|||+++..
T Consensus 94 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 94 ELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp ECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 999999999999643 4699999999999999999999998 999999999999999887 7999999999876
Q ss_pred CCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 542 LPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 542 ~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
....... ...|+......++.++|||||||++|||+||+.||.+.........+.. ....... ....
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~---~~~~~~~---~~~~ 242 (326)
T 2y0a_A 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA---VNYEFED---EYFS 242 (326)
T ss_dssp CTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH---TCCCCCH---HHHT
T ss_pred CCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHh---cCCCcCc---cccc
Confidence 5322111 1123333345678899999999999999999999976543333222221 1111110 0001
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....+.+++.+|++.||++|||+.|+++
T Consensus 243 ----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 243 ----NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp ----TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ----cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 12257889999999999999999999986
No 88
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.3e-36 Score=318.34 Aligned_cols=237 Identities=13% Similarity=0.226 Sum_probs=181.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC---------
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP--------- 458 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~--------- 458 (680)
+.||+|+||.||+|+.. +|+.||||++..... ....+.+.+|++++++++|||||+++++|.+...
T Consensus 12 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3qd2_B 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR----ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDE 87 (332)
T ss_dssp EEEECC-CSEEEEEEETTTCCEEEEEEEECCST----TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC
T ss_pred eEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc----hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhh
Confidence 89999999999999986 899999999875432 2245679999999999999999999999865432
Q ss_pred ----------------------------------------------CceEEEEEecCCCChhhhhccCC-CCCCCHHHHH
Q 005734 459 ----------------------------------------------FNRMMVFEYAPNGTVFEHLHIKE-MDHLDWNARM 491 (680)
Q Consensus 459 ----------------------------------------------~~~~lV~ey~~~GsL~~~l~~~~-~~~l~~~~rl 491 (680)
...++||||+++|+|.+++.... ....++..++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 167 (332)
T 3qd2_B 88 IWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCL 167 (332)
T ss_dssp --------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHH
T ss_pred hhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHH
Confidence 02689999999999999997543 2456788899
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc--------------------cccc
Q 005734 492 RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV--------------------SDDI 551 (680)
Q Consensus 492 ~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~--------------------~~~~ 551 (680)
+|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........ ....
T Consensus 168 ~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 9999999999999998 9999999999999999999999999999877543110 0112
Q ss_pred ccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHc
Q 005734 552 ENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKEC 631 (680)
Q Consensus 552 ~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C 631 (680)
|+......+++++|||||||++|||+||..|+... .......... ... ........++.+++.+|
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-----~~~~~~~~~~--~~~--------~~~~~~~~~~~~li~~~ 309 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-----VRIITDVRNL--KFP--------LLFTQKYPQEHMMVQDM 309 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-----HHHHHHHHTT--CCC--------HHHHHHCHHHHHHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-----HHHHHHhhcc--CCC--------cccccCChhHHHHHHHH
Confidence 23233346788999999999999999998775321 1111111111 000 11123335678999999
Q ss_pred cccCCCCCCCHHHHHH
Q 005734 632 IKTDLRQRPTMNDIIV 647 (680)
Q Consensus 632 ~~~~P~~RPtm~ev~~ 647 (680)
|+.||++|||++|+++
T Consensus 310 l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 310 LSPSPTERPEATDIIE 325 (332)
T ss_dssp HCSSGGGSCCHHHHHH
T ss_pred ccCCCCcCCCHHHHhh
Confidence 9999999999999986
No 89
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=7.9e-37 Score=325.35 Aligned_cols=245 Identities=13% Similarity=0.198 Sum_probs=186.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|... +|+.||||++.............+.+.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e 106 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--MLYMVFE 106 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEe
Confidence 489999999999999974 7899999998643211110112457899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eEEccccccccc
Q 005734 467 YAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA---AKVAEICFTTIA 541 (680)
Q Consensus 467 y~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ki~DFGla~~~ 541 (680)
|+++|+|.+.+... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 107 ~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 107 FMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp CCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred CCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 99999999888543 234689999999999999999999998 9999999999999986654 999999999876
Q ss_pred CCCCCcc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 542 LPKSKVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 542 ~~~~~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
....... ...|+......++.++|||||||++|||+||+.||.+... .+.. .......... .+..
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~---~i~~~~~~~~---~~~~ 256 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFE---GIIKGKYKMN---PRQW 256 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHHH---HHHHTCCCCC---HHHH
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-HHHH---HHHcCCCCCC---cccc
Confidence 5432211 1123333345678999999999999999999999976432 2222 2221111110 0001
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.. ...++.+++.+||+.||++|||+.|+++.
T Consensus 257 ~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 257 SH----ISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp TT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc----CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11 23578899999999999999999999863
No 90
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=6.5e-37 Score=317.09 Aligned_cols=241 Identities=17% Similarity=0.268 Sum_probs=187.9
Q ss_pred ccCCCCCCeEEEEEe---CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 390 IIDTQSGCTIYKGTL---SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~---~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.||+|+||.||+|.. .++..||||++..... .....++|.+|++++++++||||+++++++.. + ..++|||
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~e 97 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN---DPALKDELLAEANVMQQLDNPYIVRMIGICEA-E--SWMLVME 97 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC--------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S--SEEEEEE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C--CcEEEEE
Confidence 899999999999964 3468899999865431 12345679999999999999999999999943 3 5689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..++.++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 98 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (291)
T 1xbb_A 98 MAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172 (291)
T ss_dssp CCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred eCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence 99999999999753 3689999999999999999999998 999999999999999999999999999987653321
Q ss_pred cc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 547 VS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 547 ~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
.. ...|+......+++++||||||+++|||+| |+.||.......+...+..... .
T Consensus 173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~----~--------- 239 (291)
T 1xbb_A 173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER----M--------- 239 (291)
T ss_dssp EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC----C---------
T ss_pred cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC----C---------
Confidence 11 111222112345678999999999999999 9999986554333333322110 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+.....++.+++.+||+.||++||++.+|++.|+++..
T Consensus 240 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 240 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1112233678999999999999999999999999999854
No 91
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-36 Score=314.91 Aligned_cols=237 Identities=18% Similarity=0.224 Sum_probs=188.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+++.. +|+.||||++....... ....+.+.+|+.++++++|||||++++++.+.+ ..++||||
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv~e~ 87 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR--LKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMIMDY 87 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--hhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC--EEEEEEeC
Confidence 89999999999999975 78999999986432111 123456889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 88 ~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~ 162 (318)
T 1fot_A 88 IEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT 162 (318)
T ss_dssp CCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred CCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCcccc
Confidence 9999999999753 3689999999999999999999998 9999999999999999999999999999876543222
Q ss_pred ccc-----cccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHH
Q 005734 548 SDD-----IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622 (680)
Q Consensus 548 ~~~-----~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 622 (680)
... .|+......++.++|||||||++|||+||+.||........ ..........+. .....
T Consensus 163 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~i~~~~~~~p-----------~~~~~ 228 (318)
T 1fot_A 163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT---YEKILNAELRFP-----------PFFNE 228 (318)
T ss_dssp CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHHCCCCCC-----------TTSCH
T ss_pred ccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH---HHHHHhCCCCCC-----------CCCCH
Confidence 222 23333345678899999999999999999999976543222 222222211111 11225
Q ss_pred HHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 623 AICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 623 ~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
++.+++.+|++.||++|| +++|+++.
T Consensus 229 ~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 229 DVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 788999999999999999 88888753
No 92
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=315.37 Aligned_cols=253 Identities=16% Similarity=0.232 Sum_probs=191.4
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC--CCCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD--EPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~lV 464 (680)
.+.||+|+||.||+++. .+|+.||||++.... ....+.+.+|++++++++||||+++++++... .....++|
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-----QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-----HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-----HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 38999999999999997 578999999886543 23456789999999999999999999999732 11256899
Q ss_pred EEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 465 FEYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||+++|+|.+++... ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 9999999999999642 345799999999999999999999998 99999999999999999999999999987653
Q ss_pred CCC-----------------CcccccccCCCCC---CCCCCCCeeehhHHHHHHHhCCCCCCccc--cccHHHHHHHHhc
Q 005734 543 PKS-----------------KVSDDIENSVLPP---LADPETNIYSFGILMLEIISGKLPYCEEK--ELSIEKWAADYLN 600 (680)
Q Consensus 543 ~~~-----------------~~~~~~~~~~~~~---~~s~~sDVySfGvvllElltG~~p~~~~~--~~~~~~~~~~~~~ 600 (680)
... ......|+..... .+++++||||||+++|||+||+.||.... .............
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 265 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCC
Confidence 210 1112223332221 25789999999999999999999996421 1122222211110
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCCCC
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAV 661 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~~~ 661 (680)
.. .......++.+++.+||+.||++||+++++++.|+.+....+.+..
T Consensus 266 ----~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~~ 313 (317)
T 2buj_A 266 ----IP---------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHT 313 (317)
T ss_dssp ----CC---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC---
T ss_pred ----CC---------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCCC
Confidence 00 0112236789999999999999999999999999999877666544
No 93
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.1e-36 Score=321.41 Aligned_cols=243 Identities=16% Similarity=0.223 Sum_probs=188.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+++.. +|+.||||++......... ......+.+|++++.+++|||||++++++.+.. ..++||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lv~ 94 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT--DVVLIL 94 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--EEEEEE
Confidence 489999999999999975 6899999998765432110 112457899999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeEEccccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY----AAKVAEICFTTIA 541 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~ki~DFGla~~~ 541 (680)
||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||+++++ .+||+|||+++..
T Consensus 95 e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~ 169 (361)
T 2yab_A 95 ELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (361)
T ss_dssp ECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred EcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence 999999999999643 4699999999999999999999998 999999999999998776 7999999999876
Q ss_pred CCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 542 LPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 542 ~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
....... ...|+......++.++|||||||++|||++|+.||.+......... .......+. +..
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~---i~~~~~~~~----~~~- 241 (361)
T 2yab_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN---ITAVSYDFD----EEF- 241 (361)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH---HHTTCCCCC----HHH-
T ss_pred CCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhcCCCCC----chh-
Confidence 5432111 1123333345678899999999999999999999986543333222 222211111 100
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.......+.+++.+|+..||++|||+.|+++
T Consensus 242 --~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 242 --FSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp --HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0112357889999999999999999999985
No 94
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.3e-36 Score=317.94 Aligned_cols=238 Identities=13% Similarity=0.212 Sum_probs=181.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|++++++++|||||++++++.+++ ..++||||
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e~ 86 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV----DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEY 86 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------CHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccc----chHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEEc
Confidence 89999999999999975 7899999998654321 23456889999999999999999999999877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 87 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 87 CSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999999999643 3699999999999999999999998 999999999999999999999999999986542111
Q ss_pred ----cc-----cccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 ----VS-----DDIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ----~~-----~~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.. ...|+..... +.+.++|||||||++|||+||+.||........... .......... .
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~--~~~~~~~~~~-----~---- 230 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DWKEKKTYLN-----P---- 230 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHH--HHHTTCTTST-----T----
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHH--HHhcccccCC-----c----
Confidence 00 1112222122 236789999999999999999999976443222111 1111111000 0
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
......++.+++.+|++.||++|||++|+++.
T Consensus 231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11223578899999999999999999999864
No 95
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.3e-36 Score=313.06 Aligned_cols=244 Identities=15% Similarity=0.241 Sum_probs=190.1
Q ss_pred ccccCCCCCCeEEEEEeCC----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSS----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|+..+ +..||||.+..... ....+.|.+|++++++++||||+++++++.++ ..++
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~ 89 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT----LDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE---PTWI 89 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC----HHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS---SCEE
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC----chHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---CCEE
Confidence 3899999999999998642 34599998865432 23456799999999999999999999998754 3589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ...+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 90 IMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 99999999999999643 34689999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 544 KSKVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 544 ~~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
..... ...|+......+++++||||||+++|||+| |+.||......+....+......+ .
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~--~-------- 235 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP--K-------- 235 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC--C--------
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCC--C--------
Confidence 22111 112222223456888999999999999999 999997655445444433321110 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
+......+.+++.+||+.+|++||++.|+++.|+++...
T Consensus 236 ---~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 236 ---PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 111236788999999999999999999999999998653
No 96
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4e-37 Score=324.31 Aligned_cols=254 Identities=15% Similarity=0.200 Sum_probs=190.6
Q ss_pred ccccCCCCCCeEEEEEe-----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||+++. .++..||||++.... ....+.+.+|++++++++||||+++++++...+....+
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-----PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-----HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 38999999999999984 468899999986543 33456799999999999999999999999754433678
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++.... ..+++..++.|+.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 103 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 9999999999999996432 3589999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-----------HHHHHHHHhc
Q 005734 543 PKSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELS-----------IEKWAADYLN 600 (680)
Q Consensus 543 ~~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-----------~~~~~~~~~~ 600 (680)
...... ...|+......+++++||||||++++||+||+.||....... ....+.....
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 322111 111222222345778999999999999999999986432110 0111111111
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCC
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~ 659 (680)
.... ...+.....++.+++.+||+.||++|||++|++++|+.+.......
T Consensus 259 ~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 259 EGQR---------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred cccC---------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 1110 0112233468899999999999999999999999999997655443
No 97
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.6e-36 Score=320.32 Aligned_cols=251 Identities=12% Similarity=0.173 Sum_probs=186.9
Q ss_pred Hhhhhc--cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 383 ACEDFS--NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 383 ~~~~~~--~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
..+.|. +.||+|+||.||+|.. .++..||||++.............+.+.+|++++++++|||||++++++.+.+
T Consensus 24 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-- 101 (345)
T 3hko_A 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ-- 101 (345)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred hhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC--
Confidence 334454 8999999999999997 47889999998654322222344568999999999999999999999999877
Q ss_pred ceEEEEEecCCCChhhhhccC--------------------------------------CCCCCCHHHHHHHHHHHHHHH
Q 005734 460 NRMMVFEYAPNGTVFEHLHIK--------------------------------------EMDHLDWNARMRIIMGTAYCL 501 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~--------------------------------------~~~~l~~~~rl~ia~~ia~gL 501 (680)
..++||||+++|+|.+++... ....+++..+..|+.|+++||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 789999999999999998521 011235677889999999999
Q ss_pred HHHhcCCCCCeeecCCCCCCeeecCCC--CeEEcccccccccCCCCC-------c-----ccccccCCC--CCCCCCCCC
Q 005734 502 QYMHHELNPPVAHSNLSSHCIYLTDDY--AAKVAEICFTTIALPKSK-------V-----SDDIENSVL--PPLADPETN 565 (680)
Q Consensus 502 ~yLH~~~~~~ivHrDlKp~NILld~~~--~~ki~DFGla~~~~~~~~-------~-----~~~~~~~~~--~~~~s~~sD 565 (680)
+|||+. +|+||||||+||+++.++ .+||+|||+++....... . ....|+... ...+++++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999998 999999999999998766 899999999986532110 0 111233222 246788999
Q ss_pred eeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 005734 566 IYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645 (680)
Q Consensus 566 VySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev 645 (680)
|||||+++|||+||+.||.+....+.. ........... .+... ....++.+++.+|++.+|++||++.|+
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~---~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDADTI---SQVLNKKLCFE---NPNYN----VLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHCCCCTT---SGGGG----GSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCChHHHH---HHHHhcccccC---Ccccc----cCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 999999999999999999765433222 22222211111 11111 123678899999999999999999999
Q ss_pred HHH
Q 005734 646 IVQ 648 (680)
Q Consensus 646 ~~~ 648 (680)
++.
T Consensus 329 l~h 331 (345)
T 3hko_A 329 LQH 331 (345)
T ss_dssp HHS
T ss_pred hcC
Confidence 873
No 98
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=7e-37 Score=321.18 Aligned_cols=250 Identities=15% Similarity=0.225 Sum_probs=192.2
Q ss_pred ccccCCCCCCeEEEEEeC-----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTLS-----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||+||++.+. +|+.||||++..... ....+.|.+|++++++++||||+++++++.+.+....+
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG----PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC----hHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 488999999999998753 688999999865432 33456799999999999999999999999875433678
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++... .+++..++.++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 112 lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999999643 489999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-----------HHHHHHHHhc
Q 005734 543 PKSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELS-----------IEKWAADYLN 600 (680)
Q Consensus 543 ~~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-----------~~~~~~~~~~ 600 (680)
...... ...|+......++.++||||||+++|||+||+.||....... ....+.....
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 332111 111222222345678999999999999999999986432100 0001111111
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.... ...+.....++.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 266 ~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 266 RGER---------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cccC---------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 1110 0112233468999999999999999999999999999986544
No 99
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5.6e-36 Score=319.99 Aligned_cols=241 Identities=13% Similarity=0.218 Sum_probs=188.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +|..||||++...... ......+.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~lv~e 108 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFD 108 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEe
Confidence 389999999999999975 6899999998754322 234567899999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD---YAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+++....
T Consensus 109 ~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 109 LVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred cCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 99999999998643 4689999999999999999999998 99999999999999865 4599999999987653
Q ss_pred CCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 544 KSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 544 ~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
..... ...|+......++.++|||||||++|||+||+.||.+.....+...+.. ...... .+.+
T Consensus 184 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~---~~~~~~---~~~~--- 254 (362)
T 2bdw_A 184 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA---GAYDYP---SPEW--- 254 (362)
T ss_dssp CCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCCCCC---TTGG---
T ss_pred CcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh---CCCCCC---cccc---
Confidence 32211 1123333344678899999999999999999999976543333333222 111111 0111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+||+.||++||++.|+++.
T Consensus 255 -~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 255 -DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1223678899999999999999999999864
No 100
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.7e-36 Score=313.53 Aligned_cols=249 Identities=16% Similarity=0.228 Sum_probs=188.2
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEec
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~ 468 (680)
+.||+|+||+||+|+..+|+.||||++...... ......+.+|++++++++||||+++++++.+.+ ..++||||+
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 82 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKED---EGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLVFEHL 82 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGG---GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEEEECC
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccc---cccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--eEEEEEEec
Confidence 789999999999999988999999998654321 122356889999999999999999999999877 679999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC--
Q 005734 469 PNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK-- 546 (680)
Q Consensus 469 ~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~-- 546 (680)
++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 83 DQ-DLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp SE-EHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred CC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 75 999988643 34689999999999999999999998 999999999999999999999999999987542211
Q ss_pred ------cccccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--ccc-----ccCcc
Q 005734 547 ------VSDDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSC-----MIDPS 612 (680)
Q Consensus 547 ------~~~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~d~~ 612 (680)
.....|+... ...++.++|||||||++|||+||+.||.+....+....+......+.. ... ..++.
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccc
Confidence 1112233222 234788999999999999999999999865543333333332222110 000 01111
Q ss_pred c--------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 613 L--------KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 613 l--------~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
. .........++.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1 0111223467889999999999999999999975
No 101
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.5e-36 Score=326.10 Aligned_cols=241 Identities=12% Similarity=0.191 Sum_probs=188.5
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|.. .+|+.+|+|++...... ......+.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lv~E 90 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS---ARDHQKLEREARICRLLKHPNIVRLHDSISEEG--HHYLIFD 90 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH---HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC--EEEEEEE
Confidence 38999999999999986 47899999998765432 334567999999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT---DDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld---~~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+.+... ..+++.....++.|++.||+|||+. +|+||||||+|||++ +++.+||+|||+++....
T Consensus 91 ~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 91 LVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp CCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred eCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 99999999999754 3699999999999999999999998 999999999999998 467899999999987653
Q ss_pred CCCcc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSKVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
..... ...|+......+++++||||+||++|||++|+.||.+.....+...+.. ...... .+.+.
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~---~~~~~~---~~~~~- 238 (444)
T 3soa_A 166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA---GAYDFP---SPEWD- 238 (444)
T ss_dssp TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH---TCCCCC---TTTTT-
T ss_pred CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh---CCCCCC---ccccc-
Confidence 32211 1123333344678899999999999999999999976554333333322 111111 11111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||+.|+++.
T Consensus 239 ---~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 239 ---TVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---cCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 123678899999999999999999999874
No 102
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=317.78 Aligned_cols=256 Identities=16% Similarity=0.186 Sum_probs=188.0
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC---CCCcccceeeEEecCCCC---c
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI---NHKNFVNLIGYCEDDEPF---N 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~~---~ 460 (680)
.+.||+|+||+||+|+. .+|+.||||++...............+.+|+++++++ +||||++++++|...... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 38999999999999996 5789999999875442211111123456677776666 599999999999865421 3
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.++||||+. |+|.+++.......+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 169 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARI 169 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECSCSCTTT
T ss_pred EEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEeeCccccc
Confidence 689999996 6999999866656699999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc--ccccC-
Q 005734 541 ALPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF--SCMID- 610 (680)
Q Consensus 541 ~~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~d- 610 (680)
........ ...|+......++.++|||||||++|||+||+.||......+....+......+... .....
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 249 (308)
T 3g33_A 170 YSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 249 (308)
T ss_dssp STTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSS
T ss_pred cCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhc
Confidence 65332211 112333334567899999999999999999999998765444444443333221110 00000
Q ss_pred --cccC--------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 611 --PSLK--------SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 611 --~~l~--------~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+. ....+...++.+++.+|++.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 250 PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000 001123467889999999999999999999986
No 103
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-36 Score=315.43 Aligned_cols=252 Identities=17% Similarity=0.290 Sum_probs=184.1
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC--CCCcccceeeEEecCCC--CceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI--NHKNFVNLIGYCEDDEP--FNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l--~H~niv~l~g~~~~~~~--~~~~l 463 (680)
.+.||+|+||.||+|+.. |+.||||++.... ...+..|.+++... +||||+++++++..... ...++
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 112 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--------EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 112 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEeccc--------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence 399999999999999986 8899999985432 23345566666555 89999999999987631 26799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL-----NPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~-----~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
||||+++|+|.+++... .+++..+++++.+++.||+|||+.+ .++|+||||||+|||++.++.+||+|||++
T Consensus 113 v~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 113 ITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp EECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence 99999999999999643 5899999999999999999999762 458999999999999999999999999999
Q ss_pred cccCCCCCc------------ccccccCCCCCCCCCC------CCeeehhHHHHHHHhC----------CCCCCcccc-c
Q 005734 539 TIALPKSKV------------SDDIENSVLPPLADPE------TNIYSFGILMLEIISG----------KLPYCEEKE-L 589 (680)
Q Consensus 539 ~~~~~~~~~------------~~~~~~~~~~~~~s~~------sDVySfGvvllElltG----------~~p~~~~~~-~ 589 (680)
+........ ....|+.......+.+ +|||||||++|||+|| +.||..... .
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 776432211 0111222222233333 8999999999999999 666653211 1
Q ss_pred cHHHHHHHHhcCCCCcccccCcccCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 590 SIEKWAADYLNEPRNFSCMIDPSLKS--FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
............ ... .+.... ...++..++.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 270 ~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 270 PSYEDMREIVCI-KKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp CCHHHHHHHHTT-SCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CchhhhHHHHhh-hcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 111111221111 111 111111 12367788999999999999999999999999999987654
No 104
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.6e-36 Score=320.79 Aligned_cols=241 Identities=16% Similarity=0.227 Sum_probs=187.9
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+. .+|+.||||++....... ....++|.+|++++++++|||||++++++.+.+ ..++||||
T Consensus 60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~ 135 (348)
T 1u5q_A 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS--NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEY 135 (348)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEEccCCCEEEEEEEEccCCeEEEEEEEccccccc--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--eEEEEEec
Confidence 7899999999999996 578999999987543222 334567999999999999999999999999877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
++ |+|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 136 ~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~ 210 (348)
T 1u5q_A 136 CL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSF 210 (348)
T ss_dssp CS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCC
T ss_pred CC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcc
Confidence 97 6888888533 24699999999999999999999998 9999999999999999999999999999876533222
Q ss_pred cc----ccccCC---CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 548 SD----DIENSV---LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 548 ~~----~~~~~~---~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
.+ ..|+.. ....++.++|||||||++|||+||+.||........ +......... ... ....
T Consensus 211 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~---~~~~~~~~~~--~~~-------~~~~ 278 (348)
T 1u5q_A 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LYHIAQNESP--ALQ-------SGHW 278 (348)
T ss_dssp CSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHHHSCCC--CCC-------CTTS
T ss_pred cCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHhcCCC--CCC-------CCCC
Confidence 11 123322 234678899999999999999999999976443222 2222221110 000 1112
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
...+.+++.+||+.+|++|||++++++..-
T Consensus 279 ~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 279 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 357889999999999999999999987543
No 105
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7e-36 Score=312.17 Aligned_cols=254 Identities=15% Similarity=0.247 Sum_probs=188.4
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|.. .+|+.||||++....... .....++.+|++++++++||||+++++++...+ ..++|||
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 112 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD--AKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNIVLE 112 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--cEEEEEe
Confidence 38999999999999997 578999999986533221 344567999999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|+++|+|.+++... ....+++..+++++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 99999999998642 345689999999999999999999998 9999999999999999999999999998875432
Q ss_pred CCc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SKV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
... ....|+......++.++||||||+++|||+||+.||.+.. .............. .....
T Consensus 190 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~--~~~~~------- 259 (310)
T 2wqm_A 190 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-MNLYSLCKKIEQCD--YPPLP------- 259 (310)
T ss_dssp ---------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC----CCHHHHHHHHHTTC--SCCCC-------
T ss_pred CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc-hhHHHHHHHhhccc--CCCCc-------
Confidence 111 1122333334567888999999999999999999997543 22333332222211 11000
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
......++.+++.+||+.||++|||+.+|++.|+++.....+
T Consensus 260 ~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 260 SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 012236788999999999999999999999999999765433
No 106
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.4e-37 Score=323.97 Aligned_cols=245 Identities=19% Similarity=0.273 Sum_probs=190.7
Q ss_pred ccccCCCCCCeEEEEEeC-C-----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCc
Q 005734 388 SNIIDTQSGCTIYKGTLS-S-----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~-----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 460 (680)
.+.||+|+||.||+|... + +..||||.+..... ....+.+.+|++++.++ +||||++++++|.+.+ .
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~ 124 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH----ADEKEALMSELKIMSHLGQHENIVNLLGACTHGG--P 124 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--S
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC----hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC--c
Confidence 489999999999999964 2 24799998864432 23456799999999999 8999999999998877 6
Q ss_pred eEEEEEecCCCChhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 005734 461 RMMVFEYAPNGTVFEHLHIKE------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY 528 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 528 (680)
.++||||+++|+|.+++.... ...+++..++.++.+++.||+|||+. +|+||||||+|||++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCC
Confidence 799999999999999996431 34689999999999999999999998 999999999999999999
Q ss_pred CeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccccc-HHHHHH
Q 005734 529 AAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELS-IEKWAA 596 (680)
Q Consensus 529 ~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~-~~~~~~ 596 (680)
.+||+|||+++......... ...|+......++.++||||||+++|||+| |+.||.+..... ....+.
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 281 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHh
Confidence 99999999998654322110 112222223457889999999999999999 999997643222 222222
Q ss_pred HHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 597 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
...... .+...+.++.+++.+||+.||++|||+.||++.|+++..
T Consensus 282 ~~~~~~-------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 282 DGYQMA-------------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HTCCCC-------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCC-------------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 211110 011123678899999999999999999999999998754
No 107
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.4e-36 Score=326.29 Aligned_cols=253 Identities=15% Similarity=0.210 Sum_probs=188.5
Q ss_pred ccccCCC--CCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 388 SNIIDTQ--SGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G--~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
.+.||+| +||+||+|+.. +|+.||||++...... ....+.+.+|++++++++|||||++++++.+++ ..++|
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 104 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS---NEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWVV 104 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEE
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC---hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC--EEEEE
Confidence 3899999 99999999985 7999999999754322 345567889999999999999999999999887 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
||||++|+|.+++.......+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+......
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 9999999999999876556799999999999999999999998 9999999999999999999999999988654311
Q ss_pred CC---------------cccccccCCCC--CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHH-HHHHhcCC----
Q 005734 545 SK---------------VSDDIENSVLP--PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKW-AADYLNEP---- 602 (680)
Q Consensus 545 ~~---------------~~~~~~~~~~~--~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~-~~~~~~~~---- 602 (680)
.. .....|+.... ..++.++|||||||++|||+||+.||.+......... ........
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccc
Confidence 10 00122332222 4578899999999999999999999976443222111 11000000
Q ss_pred ----CCc-------------ccccC---c-------ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 603 ----RNF-------------SCMID---P-------SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 603 ----~~~-------------~~~~d---~-------~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
... ...+. + ...........++.+|+.+||+.||++|||++|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000 00000 0 0000112234678999999999999999999999865
No 108
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.5e-36 Score=317.62 Aligned_cols=255 Identities=16% Similarity=0.248 Sum_probs=188.3
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC--ceEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF--NRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~--~~~lV 464 (680)
.+.||+|+||.||+++. .+|+.||||++....... ......|.+|++++.+++|||||++++++...... ..++|
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv 94 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD--PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 94 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTS--HHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCC--HHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEE
Confidence 38999999999999996 578999999987543222 34456799999999999999999999998765421 23899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||+++|+|.++++.. ..+++..+++++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 95 ~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 95 MEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp EECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 9999999999999643 3689999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCc-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 545 SKV-----------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 545 ~~~-----------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
... ....|+......++.++||||||+++|||+||+.||........ ...............
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~---- 242 (311)
T 3ork_A 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV---AYQHVREDPIPPSAR---- 242 (311)
T ss_dssp ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHCCCCCHHHH----
T ss_pred ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHhcCCCCCcccc----
Confidence 111 11123333344678889999999999999999999976543222 222222211111000
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCH-HHHHHHHHHhhccCCCC
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTM-NDIIVQLRQVINISPEQ 659 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm-~ev~~~L~~i~~~~~~~ 659 (680)
......++.+++.+||+.||++||++ +++...+..+....+..
T Consensus 243 ---~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~ 286 (311)
T 3ork_A 243 ---HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286 (311)
T ss_dssp ---STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCS
T ss_pred ---cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCC
Confidence 01123678899999999999999964 45556676665544433
No 109
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.4e-36 Score=321.41 Aligned_cols=240 Identities=15% Similarity=0.223 Sum_probs=188.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++|||||++++++.+.. ..++|||
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~lv~E 128 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMVLILE 128 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccc-----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC--EEEEEEE
Confidence 389999999999999975 78899999886543 223457899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--CCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD--DYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--~~~~ki~DFGla~~~~~~ 544 (680)
|+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 129 ~~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~ 204 (387)
T 1kob_A 129 FLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204 (387)
T ss_dssp CCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred cCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence 99999999999643 34689999999999999999999998 9999999999999974 578999999999876543
Q ss_pred CCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 545 SKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 545 ~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.... ...|+......++.++|||||||++|||+||+.||.+.........+.. ..... ++. ..
T Consensus 205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~---~~~~~----~~~---~~ 274 (387)
T 1kob_A 205 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKR---CDWEF----DED---AF 274 (387)
T ss_dssp SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH---CCCCC----CSS---TT
T ss_pred cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCCCC----Ccc---cc
Confidence 2211 1223434445678889999999999999999999986543333322222 11111 111 01
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+||+.||++|||+.|+++.
T Consensus 275 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1223678899999999999999999999864
No 110
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.2e-37 Score=318.78 Aligned_cols=241 Identities=16% Similarity=0.287 Sum_probs=184.8
Q ss_pred ccccCCCCCCeEEEEEeC-CC-------CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 388 SNIIDTQSGCTIYKGTLS-SG-------VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g-------~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
.+.||+|+||+||+|+.. ++ ..||+|++.... ....+.|.+|++++++++||||+++++++.+++
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 85 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-----RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD-- 85 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-----GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT--
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC--
Confidence 489999999999999864 23 469999885433 223467999999999999999999999999877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC--------eE
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA--------AK 531 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--------~k 531 (680)
..++||||+++|+|.+++.... ..+++..++.|+.|++.||+|||+. +|+||||||+|||++.++. +|
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred CCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceee
Confidence 5699999999999999997543 3489999999999999999999998 9999999999999998887 99
Q ss_pred EcccccccccCCCCCc----ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCC-CCccccccHHHHHHHHhcCCCCc
Q 005734 532 VAEICFTTIALPKSKV----SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLP-YCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 532 i~DFGla~~~~~~~~~----~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p-~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
|+|||+++........ ....|+.... ..+++++||||||+++|||+||..| +............. .....
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~----~~~~~ 237 (289)
T 4fvq_A 162 LSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE----DRHQL 237 (289)
T ss_dssp ECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH----TTCCC
T ss_pred eccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh----ccCCC
Confidence 9999998765432111 1122332222 4578899999999999999996554 44332222222111 11111
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.... ..++.+++.+||+.||++|||++|+++.|+++..
T Consensus 238 ~~~~-----------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 238 PAPK-----------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp CCCS-----------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred CCCC-----------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 1111 1357899999999999999999999999999865
No 111
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.5e-36 Score=309.49 Aligned_cols=237 Identities=21% Similarity=0.318 Sum_probs=186.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|... ++..||||++....... ......+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 90 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEY 90 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--HTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEeccccch--hhHHHHHHHHHHHHHcCCCCCCcchhheEecCC--EEEEEEec
Confidence 89999999999999875 67789999886432111 222457899999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 91 ~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 165 (279)
T 3fdn_A 91 APLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 165 (279)
T ss_dssp CTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCccccc
Confidence 9999999999643 3589999999999999999999998 999999999999999999999999999866542211
Q ss_pred -----cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 547 -----VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 547 -----~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
.....|+.......+.++||||||+++|||++|+.||...........+.. ..... +....
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~-----------~~~~~ 231 (279)
T 3fdn_A 166 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR---VEFTF-----------PDFVT 231 (279)
T ss_dssp --CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH---TCCCC-----------CTTSC
T ss_pred ccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh---CCCCC-----------CCcCC
Confidence 111223333445678899999999999999999999986543333222222 11111 11122
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 622 EAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..+.+++.+|++.||++|||++|+++.
T Consensus 232 ~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 232 EGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 578899999999999999999999975
No 112
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=7e-37 Score=321.45 Aligned_cols=245 Identities=14% Similarity=0.287 Sum_probs=191.9
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+.. ++..||||++..... ......|.+|++++++++||||+++++++.+.+ ..
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~ 103 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--PT 103 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC----HHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--SC
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC----HHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC--cc
Confidence 489999999999999864 367899998864332 234567999999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEc
Q 005734 462 MMVFEYAPNGTVFEHLHIKE--------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA 533 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~--------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~ 533 (680)
++||||+++|+|.+++.... ...+++..+++++.+++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEEC
Confidence 99999999999999996421 24679999999999999999999998 99999999999999999999999
Q ss_pred ccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCC
Q 005734 534 EICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 534 DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
|||+++......... ...|+......++.++||||||+++|||+| |+.||...........+. ..
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~---~~- 256 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM---EG- 256 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH---TT-
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH---cC-
Confidence 999998654221111 112222223457888999999999999999 899997654333322221 11
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
. . ...+...+..+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 257 ~-~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 257 G-L--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp C-C--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred C-c--------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1 0 01112233678999999999999999999999999998754
No 113
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.3e-36 Score=317.03 Aligned_cols=238 Identities=18% Similarity=0.263 Sum_probs=178.4
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||+||+|+.. +|+.||||++... ....+.+|++++.+++ |||||++++++.+.. ..++|||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e 86 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--HTFLVME 86 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh--------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--EEEEEEE
Confidence 68999999999999985 6899999998543 2346778999999997 999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY---AAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++.++ .+||+|||+++....
T Consensus 87 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 87 LLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp CCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred ccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 99999999999754 4699999999999999999999998 999999999999997665 899999999987643
Q ss_pred CCCc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc----ccHHHHHHHHhcCCCCcccccCc
Q 005734 544 KSKV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE----LSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 544 ~~~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
.... ....|+......+++++|||||||++|||+||+.||..... ....+............. .+
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~ 238 (325)
T 3kn6_A 162 DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE---GE 238 (325)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC---SH
T ss_pred CCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC---cc
Confidence 2211 11224444445568889999999999999999999975332 122233333222211110 00
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. ......++.+++.+|++.||++|||++|+++.
T Consensus 239 ~----~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 239 A----WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp H----HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred c----ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 0 01223678999999999999999999998753
No 114
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6e-36 Score=318.08 Aligned_cols=237 Identities=16% Similarity=0.209 Sum_probs=188.7
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+++.. +|+.||||++...... .....+.+.+|++++.+++||||+++++++.+.+ ..++||||
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 122 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV--KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEY 122 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhc--cHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEEEEEcC
Confidence 89999999999999975 7899999998643211 1123457889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 123 ~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~ 197 (350)
T 1rdq_E 123 VAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 197 (350)
T ss_dssp CTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCC
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCCccc
Confidence 9999999999743 3589999999999999999999998 9999999999999999999999999999876543322
Q ss_pred ccc-----cccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHH
Q 005734 548 SDD-----IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622 (680)
Q Consensus 548 ~~~-----~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 622 (680)
... .|+......++.++|||||||++|||+||+.||.......+.+ ........+ +.....
T Consensus 198 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~---~i~~~~~~~-----------p~~~~~ 263 (350)
T 1rdq_E 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE---KIVSGKVRF-----------PSHFSS 263 (350)
T ss_dssp CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHCCCCC-----------CTTCCH
T ss_pred ccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHH---HHHcCCCCC-----------CCCCCH
Confidence 212 2333334567889999999999999999999998654333322 222221111 112236
Q ss_pred HHHHHHHHccccCCCCCCC-----HHHHHHH
Q 005734 623 AICEVIKECIKTDLRQRPT-----MNDIIVQ 648 (680)
Q Consensus 623 ~~~~l~~~C~~~~P~~RPt-----m~ev~~~ 648 (680)
++.+++.+|++.||++||+ ++||.+.
T Consensus 264 ~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 264 DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 7889999999999999998 7887753
No 115
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.8e-36 Score=319.21 Aligned_cols=245 Identities=18% Similarity=0.277 Sum_probs=188.1
Q ss_pred ccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+. .++..||||++..... .....+|.+|+.++++++||||+++++++.+.. ..
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 108 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS----EQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--PR 108 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SC
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc----hhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--Cc
Confidence 48999999999999984 3577899999864322 234567999999999999999999999999877 56
Q ss_pred EEEEEecCCCChhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEM-----DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVA 533 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~-----~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~ 533 (680)
++||||+++|+|.+++..... ..+++..+++++.+++.||+|||+. +|+||||||+|||++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999975432 4599999999999999999999998 9999999999999984 4569999
Q ss_pred ccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCC
Q 005734 534 EICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 534 DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
|||+++........ ....|+......++.++||||||+++|||+| |+.||...........+......
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~- 264 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM- 264 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC-
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCC-
Confidence 99999765322111 1112232223457889999999999999999 99999765433333333221110
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+......+.+++.+||+.||++||++.+|++.|+.+..
T Consensus 265 ------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 265 ------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp ------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 0111223678899999999999999999999999998864
No 116
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.6e-36 Score=315.67 Aligned_cols=249 Identities=13% Similarity=0.251 Sum_probs=186.6
Q ss_pred ccccCCCCCCeEEEEEe-----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||+|++ .+++.||||++..... ......+.+|++++++++||||+++++++...+....+
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG----GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC---------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc----chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 38999999999999984 4789999999865431 12345789999999999999999999999876433579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++.... ..+++..++.++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999996433 4699999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccc-----------cccHHHHHHHHhc
Q 005734 543 PKSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEK-----------ELSIEKWAADYLN 600 (680)
Q Consensus 543 ~~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~-----------~~~~~~~~~~~~~ 600 (680)
...... ...|+......++.++||||||+++|||+||+.|+.... .......+.....
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 332110 111221222345677999999999999999999864221 0011111111111
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
..... ..+.....++.+++.+||+.||++|||+++++++|+++.
T Consensus 258 ~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGKRL---------PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCC---------CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11100 112233468999999999999999999999999999875
No 117
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.4e-36 Score=315.81 Aligned_cols=249 Identities=14% Similarity=0.236 Sum_probs=180.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|... +|+.||||++...... .....+.+|++++++++|||||++++++.+++ ..++||||
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 84 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE----GTPSTAIREISLMKELKHENIVRLYDVIHTEN--KLTLVFEF 84 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCSTT----CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT--EEEEEEEC
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeeccccc----ccHHHHHHHHHHHHhcCCCCcceEEEEEEECC--eEEEEEEe
Confidence 78999999999999974 6899999998754321 12346889999999999999999999998877 77999999
Q ss_pred cCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 468 APNGTVFEHLHIK----EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 468 ~~~GsL~~~l~~~----~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
++ |+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 97 6999998643 224689999999999999999999998 999999999999999999999999999987642
Q ss_pred CCCc--------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC-c-ccc----
Q 005734 544 KSKV--------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN-F-SCM---- 608 (680)
Q Consensus 544 ~~~~--------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~-~-~~~---- 608 (680)
.... ....|+.... ..++.++|||||||++|||+||+.||.+.........+......+.. . ...
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 240 (317)
T 2pmi_A 161 PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLP 240 (317)
T ss_dssp CCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCT
T ss_pred CcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhh
Confidence 2111 1112332222 35788999999999999999999999876544444444333222110 0 000
Q ss_pred -cCcccC-------------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 609 -IDPSLK-------------SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 609 -~d~~l~-------------~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+.+. ........++.+++.+|++.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp TCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000000 001122357899999999999999999999986
No 118
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.4e-36 Score=312.30 Aligned_cols=246 Identities=16% Similarity=0.175 Sum_probs=187.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+++.. +|+.||||++...... ....+.+.+|++++++++||||+++++++.+......++||||
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 88 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEEC
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC---HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeC
Confidence 89999999999999975 7899999998754322 3345679999999999999999999998865332267999999
Q ss_pred cCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 468 APNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHEL--NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 468 ~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~--~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
+++|+|.+++... ....+++..+++|+.+++.||+|||+.. ..+|+||||||+||++++++.+||+|||+++....
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168 (279)
T ss_dssp CTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC--
T ss_pred CCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecc
Confidence 9999999999643 2346999999999999999999999981 01299999999999999999999999999987653
Q ss_pred CCCc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSKV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.... ....|+......++.++||||||+++|||+||+.||.......+...+..... . .
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~-----~--------~ 235 (279)
T 2w5a_A 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF-----R--------R 235 (279)
T ss_dssp -CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-----C--------C
T ss_pred ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccc-----c--------c
Confidence 3211 11223333344568889999999999999999999986543333333222111 0 0
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
.+.....++.+++.+||+.+|++||+++||++.+.
T Consensus 236 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 236 IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 11122367899999999999999999999997554
No 119
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-36 Score=321.39 Aligned_cols=237 Identities=19% Similarity=0.296 Sum_probs=183.8
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|.. .+|+.||||++....... ......+.+|++++++++||||+++++++...+ ..++|||
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~E 89 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK--SDMHMRVEREISYLKLLRHPHIIKLYDVITTPT--DIVMVIE 89 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccc--hhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEE
Confidence 38999999999999997 578999999986432111 112346889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+ +|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 90 ~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 90 YA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp CC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred CC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 99 78999998644 3699999999999999999999998 999999999999999999999999999987653321
Q ss_pred cc-------cccccCCCCCC-CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS-------DDIENSVLPPL-ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~-------~~~~~~~~~~~-~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+...... .++++|||||||++|||+||+.||.+.....+. . .+.......+.
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-------~-------~i~~~~~~~p~ 229 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-------K-------KVNSCVYVMPD 229 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-------C-------CCCSSCCCCCT
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-------H-------HHHcCCCCCcc
Confidence 11 11233322222 367899999999999999999999754311110 0 00011111222
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||++|+++.
T Consensus 230 ~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 230 FLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 234678899999999999999999999875
No 120
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=325.89 Aligned_cols=260 Identities=13% Similarity=0.226 Sum_probs=196.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+.. +|+.||||++...... ...+.+.+|++++++++|||||++++++.+......++|||
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc----chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 389999999999999985 5899999998643321 22456789999999999999999999998765445799999
Q ss_pred ecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCCeEEccccccccc
Q 005734 467 YAPNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL----TDDYAAKVAEICFTTIA 541 (680)
Q Consensus 467 y~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~ki~DFGla~~~ 541 (680)
|+++|+|.+++.... ...+++..++.|+.+++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 999999999997543 23499999999999999999999998 99999999999999 78888999999999876
Q ss_pred CCCCCccc--ccccCCCC-------------CCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcC-CCC
Q 005734 542 LPKSKVSD--DIENSVLP-------------PLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNE-PRN 604 (680)
Q Consensus 542 ~~~~~~~~--~~~~~~~~-------------~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~-~~~ 604 (680)
........ ..+.+..| ..++.++|||||||++|||+||+.||..... ....+........ +..
T Consensus 167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~ 246 (396)
T 4eut_A 167 EDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSG 246 (396)
T ss_dssp CCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTT
T ss_pred cCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcc
Confidence 53322111 11222222 2345679999999999999999999964221 1222222222222 110
Q ss_pred -cccc---------cCcc---cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 605 -FSCM---------IDPS---LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 605 -~~~~---------~d~~---l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.... .... ...........+.+++.+|++.||++||++.++++.++++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred cchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 0000 0011 113456777889999999999999999999999999999864
No 121
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=6.8e-36 Score=317.87 Aligned_cols=237 Identities=17% Similarity=0.235 Sum_probs=175.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 128 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT--EISLVLE 128 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------------CHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-------hHHHHHHHHHHHHhCCCCCCcceeeeEecCC--eEEEEEE
Confidence 389999999999999986 57899999986432 2356889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 129 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 129 LVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred eCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999999999643 4689999999999999999999998 9999999999999975 88999999999987643
Q ss_pred CCC-------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 544 KSK-------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 544 ~~~-------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
... .....||......+++++|||||||++|||+||+.||....... ............. ..+.
T Consensus 204 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~i~~~~~~~---~~~~---- 274 (349)
T 2w4o_A 204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ--FMFRRILNCEYYF---ISPW---- 274 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH--HHHHHHHTTCCCC---CTTT----
T ss_pred ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH--HHHHHHHhCCCcc---CCch----
Confidence 211 11222444444567899999999999999999999997543221 1122222221111 1111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+...++.+++.+|++.||++|||+.|+++
T Consensus 275 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 275 WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1122367889999999999999999999987
No 122
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=9.7e-36 Score=320.76 Aligned_cols=234 Identities=14% Similarity=0.169 Sum_probs=179.6
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
++||+|+||+||+++.. +++.||||+++...... ......+..|..++.++ +|||||++++++.+.+ ..++|||
T Consensus 58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~--~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~lV~E 133 (396)
T 4dc2_A 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVIE 133 (396)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC------CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC--EEEEEEE
Confidence 89999999999999975 67889999987543221 22345678899999887 8999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 134 ~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 134 YVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence 99999999999643 3699999999999999999999998 999999999999999999999999999986432211
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-----c-cHHHHHHHHhcCCCCcccccCcc
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE-----L-SIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
.. ...|+......++.++|||||||++|||+||+.||..... . ...............+
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~------- 281 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI------- 281 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCC-------
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCC-------
Confidence 11 1123333445678899999999999999999999963211 1 1111122222221111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTM 642 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm 642 (680)
+.....++.+++.+||+.||++||++
T Consensus 282 ----p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 282 ----PRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ----CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ----CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 11223678899999999999999995
No 123
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.4e-35 Score=316.73 Aligned_cols=247 Identities=14% Similarity=0.185 Sum_probs=188.9
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-----CCcccceeeEEecCCCCceE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-----HKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-----H~niv~l~g~~~~~~~~~~~ 462 (680)
+.||+|+||+||+|+. .+++.||||++... ....+.+..|++++++++ |||||++++++...+ ..+
T Consensus 41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~--~~~ 112 (360)
T 3llt_A 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI------KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD--HMC 112 (360)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSC------HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT--EEE
T ss_pred EEEcccCCeEEEEEEECCCCeEEEEEEeccc------hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC--eeE
Confidence 8999999999999997 47889999998632 233456788999999996 999999999999877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC----------------
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---------------- 526 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---------------- 526 (680)
+||||+ +|+|.+++.......+++..+..|+.|++.||+|||+. +|+||||||+|||+++
T Consensus 113 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~ 188 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188 (360)
T ss_dssp EEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTTC
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccccc
Confidence 999999 99999999876656799999999999999999999998 9999999999999986
Q ss_pred ---------CCCeEEcccccccccCCCCCcc-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHH
Q 005734 527 ---------DYAAKVAEICFTTIALPKSKVS-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIE 592 (680)
Q Consensus 527 ---------~~~~ki~DFGla~~~~~~~~~~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~ 592 (680)
++.+||+|||+++......... ...|+......++.++|||||||++|||+||+.||......+..
T Consensus 189 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~ 268 (360)
T 3llt_A 189 KKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL 268 (360)
T ss_dssp CEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHH
Confidence 7889999999998755322211 22344444556889999999999999999999999765544433
Q ss_pred HHHHHHhcCCCC----------cccccCc-----ccCCC--C---------------HHHHHHHHHHHHHccccCCCCCC
Q 005734 593 KWAADYLNEPRN----------FSCMIDP-----SLKSF--K---------------QNELEAICEVIKECIKTDLRQRP 640 (680)
Q Consensus 593 ~~~~~~~~~~~~----------~~~~~d~-----~l~~~--~---------------~~~~~~~~~l~~~C~~~~P~~RP 640 (680)
..+......... ....++. .+... . ......+.+++.+||+.||++||
T Consensus 269 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 348 (360)
T 3llt_A 269 AMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRP 348 (360)
T ss_dssp HHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCC
Confidence 333332221100 0000000 00000 0 00115678999999999999999
Q ss_pred CHHHHHH
Q 005734 641 TMNDIIV 647 (680)
Q Consensus 641 tm~ev~~ 647 (680)
|++|+++
T Consensus 349 ta~elL~ 355 (360)
T 3llt_A 349 SPAELLK 355 (360)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999975
No 124
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=321.47 Aligned_cols=237 Identities=15% Similarity=0.205 Sum_probs=184.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||+||+|+.. +|+.||||++...... .......+.+|.+++.++ +|||||++++++.+.+ ..++||
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~--~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~lv~ 103 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL--QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--RLFFVM 103 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH--HHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhc--chhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC--EEEEEE
Confidence 389999999999999975 6899999998653211 122345688999999988 6999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 104 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 104 EFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 999999999999644 3699999999999999999999998 99999999999999999999999999998643221
Q ss_pred Ccc---cccccCCCC-----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 KVS---DDIENSVLP-----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~~~---~~~~~~~~~-----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
... ...+.|.+| ..++.++||||+||++|||+||+.||.......+... .......+.
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~---i~~~~~~~p----------- 244 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA---ILNDEVVYP----------- 244 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHHCCCCCC-----------
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHH---HHcCCCCCC-----------
Confidence 111 112233333 2467899999999999999999999986553333332 222211111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCH------HHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTM------NDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm------~ev~~ 647 (680)
......+.+++.+|++.||++||++ +|+++
T Consensus 245 ~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1122578899999999999999998 66664
No 125
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.2e-36 Score=318.54 Aligned_cols=247 Identities=19% Similarity=0.393 Sum_probs=188.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEE--EEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEI--AVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~v--aVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|+.. +|..+ |||.+.... .....+.+.+|++++.++ +||||+++++++.+.+ ..++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~l 103 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYL 103 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EEEE
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeecccc----chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC--ceEE
Confidence 489999999999999974 56544 888775432 123456789999999999 8999999999999877 7899
Q ss_pred EEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 005734 464 VFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA 529 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 529 (680)
||||+++|+|.+++.... ...+++..++.++.++++||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997532 34799999999999999999999998 9999999999999999999
Q ss_pred eEEcccccccccCCCC--Ccc-----cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcC
Q 005734 530 AKVAEICFTTIALPKS--KVS-----DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNE 601 (680)
Q Consensus 530 ~ki~DFGla~~~~~~~--~~~-----~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~ 601 (680)
+||+|||+++...... ... ...|+......++.++||||||+++|||+| |+.||.......+. ......
T Consensus 181 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~---~~~~~~ 257 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY---EKLPQG 257 (327)
T ss_dssp EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH---HHGGGT
T ss_pred EEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHH---HHhhcC
Confidence 9999999987543111 001 111222222345788999999999999998 99999765432222 222111
Q ss_pred CCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 602 ~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
... ..+.....++.+++.+||+.+|++|||++++++.|+++....
T Consensus 258 -~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 258 -YRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp -CCC---------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred -CCC---------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 100 011122367899999999999999999999999999987544
No 126
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=320.37 Aligned_cols=249 Identities=14% Similarity=0.198 Sum_probs=189.2
Q ss_pred ccccCCCCCCeEEEEEeCC---------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccc----------
Q 005734 388 SNIIDTQSGCTIYKGTLSS---------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVN---------- 448 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~---------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~---------- 448 (680)
.+.||+|+||.||+|+... ++.||||++... ..+.+|++++++++|||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT----------STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----------chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 3899999999999999763 789999998643 25789999999999999998
Q ss_pred -----eeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 005734 449 -----LIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIY 523 (680)
Q Consensus 449 -----l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 523 (680)
+++++...+. ..++||||+ +|+|.+++.......+++..+++|+.|++.||+|||+. +|+||||||+|||
T Consensus 117 ~~i~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 117 LAIPTCMGFGVHQDK-YRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp CSCCCCCEEEEETTT-EEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred cCccchhhccccCCc-EEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 6777776332 679999999 99999999865446799999999999999999999998 9999999999999
Q ss_pred ecCCC--CeEEcccccccccCCCCCc---------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcc
Q 005734 524 LTDDY--AAKVAEICFTTIALPKSKV---------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEE 586 (680)
Q Consensus 524 ld~~~--~~ki~DFGla~~~~~~~~~---------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~ 586 (680)
++.++ .+||+|||+++........ ....|+......++.++|||||||++|||+||+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 8999999999876422110 011122233346788899999999999999999999764
Q ss_pred c--cccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 587 K--ELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 587 ~--~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
. ...+.............+ .+.... ......++.+++.+||+.||++||++++|++.|+++....
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVDKPGPF---VGPCGH--WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp TTCHHHHHHHHHHHHHSCCCE---ECTTSC--EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHhccCChhhh---hhhccc--cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 3 122333333222222111 111100 0112367899999999999999999999999999997544
No 127
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.7e-36 Score=314.85 Aligned_cols=246 Identities=17% Similarity=0.280 Sum_probs=191.2
Q ss_pred cccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCce
Q 005734 389 NIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 461 (680)
+.||+|+||.||+|+. .+++.||||++..... ....+.+.+|++++.++ +||||+++++++...+. ..
T Consensus 33 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~-~~ 107 (316)
T 2xir_A 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PL 107 (316)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS-CC
T ss_pred eEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC----cHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC-ce
Confidence 8999999999999984 3568899999865432 23456799999999999 79999999999987552 46
Q ss_pred EEEEEecCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC
Q 005734 462 MMVFEYAPNGTVFEHLHIKEM--------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD 527 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~--------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 527 (680)
++||||+++|+|.+++..... ..+++..++.++.++++||+|||+. +|+||||||+||+++.+
T Consensus 108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~ 184 (316)
T 2xir_A 108 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEK 184 (316)
T ss_dssp EEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCC
Confidence 999999999999999975432 2389999999999999999999998 99999999999999999
Q ss_pred CCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccc-cHHHHH
Q 005734 528 YAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKEL-SIEKWA 595 (680)
Q Consensus 528 ~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~-~~~~~~ 595 (680)
+.+||+|||+++......... ...|+......++.++||||||+++|||+| |+.||...... .....+
T Consensus 185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~ 264 (316)
T 2xir_A 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264 (316)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH
T ss_pred CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHh
Confidence 999999999998764322111 111222223456889999999999999999 99999764322 122222
Q ss_pred HHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 596 ADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 596 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
...... . .+.....++.+++.+||+.+|++|||+.||++.|+++...
T Consensus 265 ~~~~~~--~-----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 265 KEGTRM--R-----------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp HHTCCC--C-----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccCccC--C-----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 211110 0 0111235789999999999999999999999999998754
No 128
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.4e-36 Score=319.09 Aligned_cols=239 Identities=16% Similarity=0.201 Sum_probs=186.3
Q ss_pred hhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCc
Q 005734 385 EDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 385 ~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 460 (680)
++|. +.||+|+||.||+|+.. +|+.||||++...... .......+..|.+++.++ +||||+++++++.+.+ .
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~--~ 92 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL--MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--N 92 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--E
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhh--hhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--E
Confidence 4454 89999999999999985 6889999998653211 112345678899999887 8999999999999877 7
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.++||||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 89999999999999999643 3689999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCCc---c-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 541 ALPKSKV---S-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 541 ~~~~~~~---~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
....... . ...|+......++.++|||||||++|||+||+.||.+.....+...+ ......+.
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i---~~~~~~~p------ 238 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI---RMDNPFYP------ 238 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HHCCCCCC------
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---HhCCCCCC------
Confidence 4321111 1 11233333456788999999999999999999999865433333322 22211111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMN-DII 646 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~-ev~ 646 (680)
.....++.+++.+|++.||++||++. +|.
T Consensus 239 -----~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 239 -----RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -----cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11226788999999999999999997 665
No 129
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=318.38 Aligned_cols=249 Identities=15% Similarity=0.274 Sum_probs=189.4
Q ss_pred ccccCCCCCCeEEEEEe-----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||+++. .+|+.||||++.... ....+.|.+|++++++++||||+++++++...+....+
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-----SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 38999999999999984 468899999986543 23456799999999999999999999998765433568
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++.... ..+++..+++++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 121 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999997543 4699999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc------------cHHHHHHHHh
Q 005734 543 PKSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL------------SIEKWAADYL 599 (680)
Q Consensus 543 ~~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~------------~~~~~~~~~~ 599 (680)
...... ...|+......++.++||||||++++||+||+.|+...... .....+...+
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 276 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence 332110 11122222234577899999999999999999998532100 0011111111
Q ss_pred cCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 600 NEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 600 ~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
...... ..+...+.++.+++.+||+.+|++|||+.||++.|+++.+
T Consensus 277 ~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 277 KNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCCCC---------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111110 1122334689999999999999999999999999999864
No 130
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.7e-36 Score=308.89 Aligned_cols=239 Identities=15% Similarity=0.223 Sum_probs=188.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC----------
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD---------- 456 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~---------- 456 (680)
.+.||+|+||.||+|+.. +|+.||||++.... ..+.+|++++++++||||+++++++...
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc---------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 389999999999999986 78999999986543 2467899999999999999999988641
Q ss_pred ----CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEE
Q 005734 457 ----EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKV 532 (680)
Q Consensus 457 ----~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki 532 (680)
.....++||||+++|+|.+++.......+++..++.++.+++.||+|||+. +|+||||||+||++++++.+||
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl 163 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKI 163 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEE
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEEE
Confidence 111468999999999999999765556799999999999999999999998 9999999999999999999999
Q ss_pred cccccccccCCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 533 AEICFTTIALPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 533 ~DFGla~~~~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
+|||+++......... ...|+......++.++||||||+++|||+||..|+.... ......... ..
T Consensus 164 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~~~~~~~~~--~~ 236 (284)
T 2a19_B 164 GDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-----KFFTDLRDG--II 236 (284)
T ss_dssp CCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-----HHHHHHHTT--CC
T ss_pred CcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-----HHHHHhhcc--cc
Confidence 9999998765332111 112232333457889999999999999999999875321 111111111 11
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.. ....++.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 237 ~~-----------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 237 SD-----------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp CT-----------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred cc-----------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 11 11256789999999999999999999999999987544
No 131
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=7.2e-36 Score=317.21 Aligned_cols=256 Identities=11% Similarity=0.090 Sum_probs=182.8
Q ss_pred ccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhH------HHHHHHHHHHHHHHHcCCCCcccceeeEEecC-
Q 005734 388 SNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWL------KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD- 456 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~- 456 (680)
.+.||+|+||.||+|... ++..+|||+.......... ......+.+|+..+..++||||+++++++...
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 489999999999999985 5788999988754322111 11123578899999999999999999999872
Q ss_pred -CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC--CeEEc
Q 005734 457 -EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY--AAKVA 533 (680)
Q Consensus 457 -~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~--~~ki~ 533 (680)
+....++||||+ +|+|.+++.... .+++..+++|+.|++.||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 122 ~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kL~ 195 (345)
T 2v62_A 122 KGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLA 195 (345)
T ss_dssp SSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSEEEC
T ss_pred CCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcEEEE
Confidence 112679999999 999999997543 799999999999999999999998 999999999999999887 99999
Q ss_pred ccccccccCCCCCc---------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc--ccHHHHHH
Q 005734 534 EICFTTIALPKSKV---------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE--LSIEKWAA 596 (680)
Q Consensus 534 DFGla~~~~~~~~~---------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~--~~~~~~~~ 596 (680)
|||+++........ ....|+......++.++|||||||++|||+||+.||..... ........
T Consensus 196 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 275 (345)
T 2v62_A 196 DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKT 275 (345)
T ss_dssp CCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHH
T ss_pred eCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHH
Confidence 99999876422110 01112222334578899999999999999999999964321 11111111
Q ss_pred HHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 597 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..... ....+..... ....+.++.+++.+||+.||++||++++|++.|+++..
T Consensus 276 ~~~~~---~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 276 NLLDE---LPQSVLKWAP--SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHT---TTHHHHHHSC--TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred hhccc---ccHHHHhhcc--ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11111 1100000000 01233689999999999999999999999999998754
No 132
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.1e-35 Score=313.43 Aligned_cols=239 Identities=13% Similarity=0.200 Sum_probs=177.2
Q ss_pred ccccCCCCCCeEEEEEe----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTL----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+++. .+|+.||||++....... .......+.+|++++++++|||||++++++...+ ..++
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 98 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR-NAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG--KLYL 98 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC---------------HHHHHHHCCCTTBCCEEEEEECSS--CEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhh-hhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC--EEEE
Confidence 38999999999999997 478999999986543211 1223456889999999999999999999999877 6799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 99 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 99 ILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 99999999999999643 3689999999999999999999998 999999999999999999999999999976532
Q ss_pred CCCc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSKV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.... ....|+......++.++||||||+++|||+||+.||......... .........+.
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~i~~~~~~~p--------- 241 (327)
T 3a62_A 174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI---DKILKCKLNLP--------- 241 (327)
T ss_dssp -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHTCCCCC---------
T ss_pred CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHH---HHHHhCCCCCC---------
Confidence 2111 112233333456788999999999999999999999865433322 22222211111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
.....++.+++.+||+.||++|| ++.|+++.
T Consensus 242 --~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 242 --PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 11236788999999999999999 67777653
No 133
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.2e-35 Score=307.76 Aligned_cols=249 Identities=15% Similarity=0.179 Sum_probs=185.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+.. +|+.||||++...... ......+.+|++++++++|||||++++++.+++ ..++||||
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 82 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD---EGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFEF 82 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS---TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCc---CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC--EEEEEEec
Confidence 78999999999999975 6899999998755422 233467889999999999999999999999877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++ ++.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 83 ~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 83 CDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp CSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred CCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 975 666666433 34699999999999999999999998 9999999999999999999999999999876422111
Q ss_pred c--------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCcc-ccccHHHHHHHHhcCCCC--ccccc------
Q 005734 548 S--------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEE-KELSIEKWAADYLNEPRN--FSCMI------ 609 (680)
Q Consensus 548 ~--------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~-~~~~~~~~~~~~~~~~~~--~~~~~------ 609 (680)
. ...|+.... ..++.++|||||||+++||+||+.|+... ...+....+......+.. .....
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence 1 112332222 23688999999999999999998886432 222233333222222110 00000
Q ss_pred -------CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 -------DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 -------d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...+.........++.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00011112234467889999999999999999999986
No 134
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1e-35 Score=328.10 Aligned_cols=238 Identities=18% Similarity=0.286 Sum_probs=187.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++....... ......+.+|++++++++||||+++++++...+ ..++|||
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--~~~lv~E 96 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS--LDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS--DIFMVME 96 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH--TTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEe
Confidence 389999999999999975 79999999986432111 123457899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 97 ~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 97 YVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp CCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999999999643 4699999999999999999999998 999999999999999999999999999987653321
Q ss_pred cc--cccccCCC-----CC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--DDIENSVL-----PP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--~~~~~~~~-----~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...+.+.+ .. +.++++||||+||++|||+||+.||.+.....+...+ ....... +.
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i---~~~~~~~-----------p~ 237 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKI---CDGIFYT-----------PQ 237 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHH---HTTCCCC-----------CT
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHH---hcCCcCC-----------Cc
Confidence 11 11122222 22 3467899999999999999999999865433333222 2211111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||++|+++.
T Consensus 238 ~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 238 YLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp TCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 122578899999999999999999999873
No 135
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.9e-36 Score=305.49 Aligned_cols=236 Identities=15% Similarity=0.274 Sum_probs=168.7
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|.. .+|+.||||++....... ......+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 93 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIMVIE 93 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--CEEEEEE
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcch--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC--eEEEEeh
Confidence 37899999999999986 478999999986543221 233557889999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+ +|+|.+++... ..+++..+.+++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 94 ~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 94 YA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 99 77888888644 3699999999999999999999998 999999999999999999999999999987643221
Q ss_pred cc-------cccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS-------DDIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~-------~~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+..... ..++++||||||+++|||+||+.||...........+. ....... .
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~~-----------~ 233 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS---NGVYTLP-----------K 233 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HTCCCCC-----------T
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCCCCCC-----------c
Confidence 11 1112222222 33788999999999999999999997654322222222 2211111 1
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....+.+++.+|++.||++|||++|+++
T Consensus 234 ~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 234 FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 12257889999999999999999999975
No 136
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=310.67 Aligned_cols=234 Identities=13% Similarity=0.111 Sum_probs=178.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||+||+|+.. +|+.||||++...... ......+..|+..+.++ +|||||+++++|.+++ ..++||
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~--~~~lv~ 136 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG---PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG--ILYLQT 136 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccC---hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC--EEEEEE
Confidence 389999999999999986 7999999987543322 22334556666666666 8999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+ +|+|.+++.... ..++|..+.+|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 137 e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp ECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred ecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 999 779999886543 4699999999999999999999998 99999999999999999999999999988765322
Q ss_pred Cc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 546 KV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 546 ~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ....|+... +.+++++|||||||++|||+||..|+..... . .. +.. .... +.+ ..
T Consensus 212 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~g~~~~~~~~~--~----~~-~~~-~~~~----~~~---~~ 275 (311)
T 3p1a_A 212 AGEVQEGDPRYMAPELLQ-GSYGTAADVFSLGLTILEVACNMELPHGGEG--W----QQ-LRQ-GYLP----PEF---TA 275 (311)
T ss_dssp ---CCCCCGGGCCGGGGG-TCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--H----HH-HTT-TCCC----HHH---HT
T ss_pred CCcccCCCccccCHhHhc-CCCCchhhHHHHHHHHHHHHhCCCCCCCccH--H----HH-Hhc-cCCC----ccc---cc
Confidence 11 122244333 3578899999999999999999777654321 1 11 111 0011 100 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++.+++.+|++.||++|||++|+++
T Consensus 276 ~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 276 GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 12367899999999999999999999986
No 137
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.8e-36 Score=307.11 Aligned_cols=238 Identities=15% Similarity=0.239 Sum_probs=178.3
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+. .+|+.||||++...... .......+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 91 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY--KAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN--YVYLVLE 91 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhh--hhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC--eEEEEEe
Confidence 38999999999999997 57899999998643211 1122467899999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 92 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 92 MCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp CCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred cCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 99999999999743 34689999999999999999999998 999999999999999999999999999987642211
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+.......+.++||||||+++|||+||+.||......... ...... +. ..+.
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~--------~~---~~~~ 233 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL---NKVVLA--------DY---EMPS 233 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------CCSS--------CC---CCCT
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH---HHHhhc--------cc---CCcc
Confidence 1 112234334445688999999999999999999999754322111 111110 00 0111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++.+++.+|++.||++|||++++++
T Consensus 234 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 234 FLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 22357889999999999999999999985
No 138
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.1e-36 Score=332.35 Aligned_cols=253 Identities=15% Similarity=0.188 Sum_probs=191.3
Q ss_pred HHHHHhhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 379 ELDTACEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 379 ~l~~~~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
++...+++|. ++||+|+||+||+|+.. +++.||||++...... .......+.+|++++.+++|||||+++++|.+
T Consensus 68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML--KRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH--HTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh--hHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3333445665 89999999999999986 5788999998643211 11122348899999999999999999999998
Q ss_pred CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 456 ~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
.+ ..++|||||++|+|.+++... ...+++.....++.+++.||+|||+. +|+||||||+|||+|.++.+||+||
T Consensus 146 ~~--~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 146 DN--NLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp SS--EEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CC--EEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 87 789999999999999999753 34699999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCcc----cccccCCC----------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC
Q 005734 536 CFTTIALPKSKVS----DDIENSVL----------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601 (680)
Q Consensus 536 Gla~~~~~~~~~~----~~~~~~~~----------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~ 601 (680)
|+++......... ...+.|.+ ...++.++|||||||++|||+||+.||.+....+....+......
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 299 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER 299 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccc
Confidence 9998765332211 11223332 235688999999999999999999999865533333332211100
Q ss_pred CCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 005734 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQ--RPTMNDIIVQ 648 (680)
Q Consensus 602 ~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~--RPtm~ev~~~ 648 (680)
..+. .... ....++.+++.+|+..+|++ ||+++|+++.
T Consensus 300 -~~~p----~~~~----~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 300 -FQFP----TQVT----DVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp -CCCC----SSCC----CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred -ccCC----cccc----cCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0000 0001 12257889999999888888 9999999864
No 139
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=9.6e-38 Score=324.71 Aligned_cols=248 Identities=19% Similarity=0.306 Sum_probs=171.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHc--CCCCcccceeeEEecCCCC--ceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSR--INHKNFVNLIGYCEDDEPF--NRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~~~--~~~l 463 (680)
.+.||+|+||.||+|+.. |+.||||++.... ...+.+|.+++.. ++||||+++++++...... ..++
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-TT--------HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEecccc--------hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 489999999999999875 8899999985432 3457788888887 7999999999999865421 4689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMH--------HELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH--------~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
||||+++|+|.+++... .+++..+++++.+++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 79 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeec
Confidence 99999999999999643 5888999999999999999999 55 9999999999999999999999999
Q ss_pred ccccccCCCCCcc-------cccccCCCCC-----------CCCCCCCeeehhHHHHHHHhC----------CCCCCccc
Q 005734 536 CFTTIALPKSKVS-------DDIENSVLPP-----------LADPETNIYSFGILMLEIISG----------KLPYCEEK 587 (680)
Q Consensus 536 Gla~~~~~~~~~~-------~~~~~~~~~~-----------~~s~~sDVySfGvvllElltG----------~~p~~~~~ 587 (680)
|+++......... ...+.+.+|+ .+++++|||||||++|||+|| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997665322211 1112222222 223579999999999999999 66664321
Q ss_pred c--ccHHHHHHHHhcCCCCcccccCcccCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 588 E--LSIEKWAADYLNEPRNFSCMIDPSLKS--FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 588 ~--~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
. ............. ...+.... ...+++..+.+++.+||+.||++|||+++|+++|+++....
T Consensus 233 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 233 PSDPSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-CCCCC-CHHHHTTS------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCCccHHHHHHHHHHh------hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1 0011111111111 01111111 12356778999999999999999999999999999886543
No 140
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.9e-36 Score=314.97 Aligned_cols=248 Identities=15% Similarity=0.246 Sum_probs=182.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCC------CC
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDE------PF 459 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~------~~ 459 (680)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++.+++ ||||+++++++.... ..
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-----HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCc-----hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 389999999999999974 78999999885543 234567899999999996 999999999995321 11
Q ss_pred ceEEEEEecCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIK-EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~-~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
..++|+||+. |+|.+++... ....+++..+++|+.+++.||+|||+. .++|+||||||+|||++.++.+||+|||++
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 4689999995 7999988642 334699999999999999999999997 122999999999999999999999999999
Q ss_pred cccCCCCCc--------------------ccccccCC---CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHH
Q 005734 539 TIALPKSKV--------------------SDDIENSV---LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA 595 (680)
Q Consensus 539 ~~~~~~~~~--------------------~~~~~~~~---~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~ 595 (680)
+........ ....|+.. ....+++++|||||||++|||+||+.||....... ..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~---~~ 262 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR---IV 262 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH---hh
Confidence 876532111 01123322 23345778999999999999999999997543211 11
Q ss_pred HHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 596 ADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 596 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
......+. .......+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 263 ~~~~~~~~-------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 263 NGKYSIPP-------------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp ---CCCCT-------------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred cCcccCCc-------------ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 11111100 001113578899999999999999999999999999765543
No 141
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.3e-35 Score=302.85 Aligned_cols=240 Identities=13% Similarity=0.209 Sum_probs=188.2
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|... +|+.||||++...... ....+.+.+|++++++++||||+++++++.+++ ..++||||
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~ 86 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFDL 86 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC---HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC--EEEEEEec
Confidence 89999999999999975 6899999998754322 334567899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eEEcccccccccCCC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA---AKVAEICFTTIALPK 544 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ki~DFGla~~~~~~ 544 (680)
+++|+|.+.+... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++. +||+|||++......
T Consensus 87 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 87 VTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999999988644 3689999999999999999999998 9999999999999986655 999999999776533
Q ss_pred CCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 545 SKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 545 ~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.... ...|+......++.++||||||++++||++|+.||...........+...... .. .+...
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~---~~---~~~~~--- 232 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD---YP---SPEWD--- 232 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC---CC---TTTTT---
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc---CC---chhhc---
Confidence 2211 11233334456788999999999999999999999765433333322221111 10 11111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||++|+++.
T Consensus 233 -~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 233 -TVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -TSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 123578899999999999999999999874
No 142
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-35 Score=315.93 Aligned_cols=250 Identities=14% Similarity=0.184 Sum_probs=182.9
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|++++++++||||+++++++...+. ...++
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~l 107 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS---ELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYL 107 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSS---HHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEE
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccC---HHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEE
Confidence 7899999999999997 47899999998543221 3345678999999999999999999999976531 14599
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 v~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 108 VMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp EEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 99999 8899999864 3589999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcccccccCCCC------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-C------------
Q 005734 544 KSKVSDDIENSVLP------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-N------------ 604 (680)
Q Consensus 544 ~~~~~~~~~~~~~~------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~------------ 604 (680)
........+.+.+| ..++.++||||+||+++||+||+.||.+....+....+......+. .
T Consensus 181 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~ 260 (367)
T 1cm8_A 181 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260 (367)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHH
T ss_pred ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHH
Confidence 32211112222222 4678999999999999999999999986554333333322221110 0
Q ss_pred ----cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 605 ----FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 605 ----~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+...-...+..........+.+++.+|++.||++|||++|+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 261 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00000011111122334678999999999999999999999874
No 143
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-35 Score=304.97 Aligned_cols=240 Identities=16% Similarity=0.260 Sum_probs=183.0
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.+.||+|+||.||++... +|..+|||++...... ...+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 99 (285)
T 3is5_A 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ----VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH--NMYIVM 99 (285)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred ecceeccCCCeEEEEEEEccCCceEEEEEeeccccc----hhHHHHHHHHHHHHhCCCchHHhHHHheecCC--eEEEEE
Confidence 3489999999999999974 6889999998654321 12457899999999999999999999998877 779999
Q ss_pred EecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccc
Q 005734 466 EYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTI 540 (680)
Q Consensus 466 ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~ 540 (680)
||+++|+|.+++... ....+++..+.+|+.++++||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 999999999998543 235799999999999999999999998 99999999999999 4568899999999987
Q ss_pred cCCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 541 ALPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 541 ~~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
........ ...|+.. ...++.++||||||++++||+||+.||.+............ .. ..... ..
T Consensus 177 ~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~--~~-~~~~~----~~ 248 (285)
T 3is5_A 177 FKSDEHSTNAAGTALYMAPEVF-KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY--KE-PNYAV----EC 248 (285)
T ss_dssp ----------CTTGGGCCHHHH-TTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CC-CCCCC------
T ss_pred cCCcccCcCcccccCcCChHHh-ccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhcc--CC-ccccc----cc
Confidence 54322111 1122222 23567889999999999999999999986543332222211 11 11100 00
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.. ...++.+++.+|++.||++|||+.|+++
T Consensus 249 ~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 249 RP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred Cc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01 1257889999999999999999999985
No 144
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.8e-35 Score=312.39 Aligned_cols=235 Identities=14% Similarity=0.163 Sum_probs=181.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+++.. +|+.||||++....... ....+.+.+|.+++.++ +|||||++++++.+.+ ..++||
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv~ 89 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVI 89 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc--hHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC--EEEEEE
Confidence 389999999999999985 68899999987543221 33456788999999988 8999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 90 e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 90 EYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 999999999999643 3689999999999999999999998 99999999999999999999999999998643211
Q ss_pred Cc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc------ccHHHHHHHHhcCCCCcccccCc
Q 005734 546 KV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE------LSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 546 ~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
.. ....|+......++.++|||||||++|||+||+.||..... ................+
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~------ 238 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI------ 238 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCC------
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCC------
Confidence 11 11123333345678899999999999999999999964211 11111111222221111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTM 642 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm 642 (680)
+.....++.+++.+|++.||++||++
T Consensus 239 -----p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 239 -----PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -----CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -----CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11223678899999999999999995
No 145
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.1e-35 Score=321.89 Aligned_cols=237 Identities=15% Similarity=0.246 Sum_probs=180.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHc-CCCCcccceeeEEec--CCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSR-INHKNFVNLIGYCED--DEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~--~~~~~~~lV 464 (680)
++||+|+||+||++... +|+.||||++... ..+.+|++++.+ .+|||||++++++.. .+....++|
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv 137 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 137 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc----------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEE
Confidence 68999999999999975 6899999998532 246678888754 489999999999864 111157999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEccccccccc
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIA 541 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~ 541 (680)
||||++|+|.+++.......+++..+..|+.+|+.||+|||+. +|+||||||+|||++. ++.+||+|||+++..
T Consensus 138 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~ 214 (400)
T 1nxk_A 138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 214 (400)
T ss_dssp EECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence 9999999999999866556799999999999999999999998 9999999999999997 789999999999876
Q ss_pred CCCCC-------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc----HHHHHHHHhcCCCCcccccC
Q 005734 542 LPKSK-------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELS----IEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 542 ~~~~~-------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~d 610 (680)
..... .....|+......++.++|||||||++|||+||+.||....... ....+.. ....+. .
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~---~~~~~~---~ 288 (400)
T 1nxk_A 215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM---GQYEFP---N 288 (400)
T ss_dssp C-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH---TCCCCC---T
T ss_pred CCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc---CcccCC---C
Confidence 53221 11223455555677889999999999999999999997543221 2222221 100010 1
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.. .....++.+++.+||+.||++|||+.|+++.
T Consensus 289 ~~~----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 289 PEW----SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTT----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111 1223678999999999999999999999975
No 146
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=308.04 Aligned_cols=250 Identities=16% Similarity=0.225 Sum_probs=188.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+.. +|+.||||++...... ....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD---PVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR--RLHLVFEY 83 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccc---hHHHHHHHHHHHHHHhCCCCCccchhheeecCC--eEEEEEEe
Confidence 78999999999999985 5899999988654322 334567889999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 84 ~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 84 CDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp CSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999999988643 3689999999999999999999998 9999999999999999999999999999876532211
Q ss_pred c--------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC-----------CCccc
Q 005734 548 S--------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-----------RNFSC 607 (680)
Q Consensus 548 ~--------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 607 (680)
. ...|+... ...++.++||||||+++|||+||+.||.+....+....+....... .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 1 11222222 2456889999999999999999999998655443333333322210 00000
Q ss_pred ccCcccCCC------CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 608 MIDPSLKSF------KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 608 ~~d~~l~~~------~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...+..... ......++.+++.+||+.||++|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000 01234568899999999999999999999863
No 147
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1e-35 Score=311.72 Aligned_cols=240 Identities=16% Similarity=0.275 Sum_probs=179.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
++||+|+||+||+|+. .+|+.||||++..... .....+.+|++++.++ +||||+++++++.+.+ ..++|||
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~--~~~lv~e 91 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPG-----HIRSRVFREVEMLYQCQGHRNVLELIEFFEEED--RFYLVFE 91 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS-----CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc-----hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--EEEEEEE
Confidence 6799999999999996 4789999999865432 1245688999999985 7999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA---AKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++....
T Consensus 92 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 92 KMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred cCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 99999999999654 3689999999999999999999998 9999999999999998766 99999999876542
Q ss_pred CCCc----------ccccccCCCC----------CCCCCCCCeeehhHHHHHHHhCCCCCCcccccc------------H
Q 005734 544 KSKV----------SDDIENSVLP----------PLADPETNIYSFGILMLEIISGKLPYCEEKELS------------I 591 (680)
Q Consensus 544 ~~~~----------~~~~~~~~~~----------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~------------~ 591 (680)
.... ....+.+..| ..++.++|||||||++|||+||+.||......+ .
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 1100 0011222222 235788999999999999999999997543211 1
Q ss_pred HHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 592 EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
................ .... ....++.+++.+|++.||++|||++|+++
T Consensus 247 ~~~~~~i~~~~~~~~~---~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 247 NMLFESIQEGKYEFPD---KDWA----HISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHCCCCCCH---HHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhccCcccCc---hhcc----cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1111111111111110 0001 12357899999999999999999999987
No 148
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.5e-35 Score=305.59 Aligned_cols=238 Identities=15% Similarity=0.200 Sum_probs=188.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++... +++.+|+|++....... ....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 95 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLE 95 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccC--HHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC--EEEEEEe
Confidence 389999999999999985 57889999886543221 344567899999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++..+..++.++++||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 96 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 96 LCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp CCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred cCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 99999999988643 3689999999999999999999998 999999999999999999999999999987642211
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+.......+.++||||||++++||+||+.||......+ ............ +.
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~-----------~~ 236 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKKNEYSI-----------PK 236 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHHHTTCCCC-----------CT
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHhhccCCC-----------cc
Confidence 11 112333334456889999999999999999999997644222 222222221111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....+.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 237 HINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 122578899999999999999999999975
No 149
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.2e-35 Score=313.68 Aligned_cols=242 Identities=18% Similarity=0.356 Sum_probs=188.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccch---hhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSK---DWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~---~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 463 (680)
+.||+|+||.||+|+.. +|+.||||++...... .......+.+.+|++++.++ +||||+++++++.... ..++
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~l 177 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS--FMFL 177 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS--EEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC--EEEE
Confidence 89999999999999985 7999999998754321 11233456789999999999 7999999999998877 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 178 v~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~ 252 (365)
T 2y7j_A 178 VFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP 252 (365)
T ss_dssp EECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcccccCC
Confidence 99999999999999643 3689999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc--cccccCCC-----------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 544 KSKVS--DDIENSVL-----------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 544 ~~~~~--~~~~~~~~-----------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
..... ...+.+.. ...++.++|||||||++|||+||+.||...........+.. ...... .
T Consensus 253 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~~~---~ 326 (365)
T 2y7j_A 253 GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME---GQYQFS---S 326 (365)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCCCCC---H
T ss_pred CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh---CCCCCC---C
Confidence 32211 11122222 22478899999999999999999999976543333222222 111110 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+.+.. ....+.+++.+|++.||++|||++|+++
T Consensus 327 ~~~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 327 PEWDD----RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHSS----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccccc----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111 1256889999999999999999999986
No 150
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3e-35 Score=317.61 Aligned_cols=250 Identities=15% Similarity=0.237 Sum_probs=179.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||+|.. .+|+.||||++...... ......+.+|+.++.+++ |||||++++++...+....++|||
T Consensus 15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e 91 (388)
T 3oz6_A 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN---STDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFD 91 (388)
T ss_dssp EC-------CEEEEEETTTCCEEEEEEECC--CC---HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEE
T ss_pred EEeeeCCCeEEEEEEECCCCCEEEEEEecccccC---hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEec
Confidence 8999999999999996 47899999988543211 234567889999999997 999999999998655335799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||+ |+|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 92 ~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 92 YME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp CCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred ccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence 997 699999865 3689999999999999999999998 999999999999999999999999999987532100
Q ss_pred c-----------------------------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHH
Q 005734 547 V-----------------------------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAA 596 (680)
Q Consensus 547 ~-----------------------------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~ 596 (680)
. ....|+.... ..++.++||||+||+++||+||+.||.+....+....+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~ 244 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII 244 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 0 0111222222 457889999999999999999999998765444433333
Q ss_pred HHhcCCCCc--cccc------------------CcccCCC-------------CHHHHHHHHHHHHHccccCCCCCCCHH
Q 005734 597 DYLNEPRNF--SCMI------------------DPSLKSF-------------KQNELEAICEVIKECIKTDLRQRPTMN 643 (680)
Q Consensus 597 ~~~~~~~~~--~~~~------------------d~~l~~~-------------~~~~~~~~~~l~~~C~~~~P~~RPtm~ 643 (680)
..+..+..- ..+- ....... ......++.+|+.+||+.||++|||++
T Consensus 245 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~ 324 (388)
T 3oz6_A 245 GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAN 324 (388)
T ss_dssp HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHH
Confidence 333221100 0000 0000000 002235789999999999999999999
Q ss_pred HHHHH
Q 005734 644 DIIVQ 648 (680)
Q Consensus 644 ev~~~ 648 (680)
|+++.
T Consensus 325 e~l~H 329 (388)
T 3oz6_A 325 DALKH 329 (388)
T ss_dssp HHTTS
T ss_pred HHhCC
Confidence 99876
No 151
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.2e-35 Score=310.16 Aligned_cols=244 Identities=17% Similarity=0.244 Sum_probs=189.3
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+.+.||+|+||.||+|+.. +|+.||||++......... .....++.+|++++++++||||+++++++.+.+ ..++|
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 93 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT--DVVLI 93 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EEEEE
Confidence 3489999999999999975 6899999998765422110 112457899999999999999999999999877 77999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeEEcccccccc
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY----AAKVAEICFTTI 540 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~ki~DFGla~~ 540 (680)
|||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++ .+||+|||+++.
T Consensus 94 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 94 LELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp ECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred EEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 9999999999999643 4689999999999999999999998 999999999999999887 799999999987
Q ss_pred cCCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 541 ALPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 541 ~~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
........ ...|+......++.++||||||+++|||+||+.||.......... ......... ++..
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~i~~~~~~~----~~~~ 241 (321)
T 2a2a_A 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---NITSVSYDF----DEEF 241 (321)
T ss_dssp CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH---HHHTTCCCC----CHHH
T ss_pred cCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHH---HHHhccccc----Chhh
Confidence 65332111 122333334567889999999999999999999997654333222 222211111 1110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.......+.+++.+|++.||++|||++|+++
T Consensus 242 ---~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 242 ---FSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp ---HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ---hcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0112257889999999999999999999986
No 152
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.3e-35 Score=317.89 Aligned_cols=240 Identities=15% Similarity=0.206 Sum_probs=177.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHH-HHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDT-LSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+++.. +++.||||++....... ......+..|..+ ++.++|||||++++++.+.+ ..++||
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~--~~~lv~ 118 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK--KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYFVL 118 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC---------------CCBCCCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh--hHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC--EEEEEE
Confidence 489999999999999985 68899999987544221 2334556777776 57789999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ..+++.....++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 119 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 119 DYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 999999999999643 3688999999999999999999998 99999999999999999999999999998643221
Q ss_pred Ccc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 KVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
... ...|+......++.++|||||||++|||+||+.||.......+. .........+. +
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~---~~i~~~~~~~~----~------ 260 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY---DNILNKPLQLK----P------ 260 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH---HHHHHSCCCCC----S------
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH---HHHHhcccCCC----C------
Confidence 111 11223333445788999999999999999999999765433332 22222211111 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
....++.+++.+|++.||++||++.+.+.++.
T Consensus 261 -~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~ 292 (373)
T 2r5t_A 261 -NITNSARHLLEGLLQKDRTKRLGAKDDFMEIK 292 (373)
T ss_dssp -SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHH
T ss_pred -CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHh
Confidence 12257889999999999999999865444443
No 153
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.8e-35 Score=303.59 Aligned_cols=242 Identities=20% Similarity=0.295 Sum_probs=184.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC--CCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE--PFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~~~lV 464 (680)
...||+|+||+||+|... ++..||+|++..... .....+.+.+|++++++++||||+++++++.... ....++|
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhh---CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 368999999999999874 678899998865432 2344677999999999999999999999986521 1257999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeEEcccccccccCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAEICFTTIALP 543 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~DFGla~~~~~ 543 (680)
|||+++|+|.+++... ..+++..+..|+.+++.||+|||+. .++|+||||||+||+++ +++.+||+|||+++....
T Consensus 108 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 9999999999999643 3689999999999999999999998 12399999999999998 789999999999976543
Q ss_pred CCCc------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 544 KSKV------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 544 ~~~~------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.... ....|+... +.++.++||||||+++|||+||+.||..... ............. ....+
T Consensus 185 ~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~--~~~~~------- 252 (290)
T 1t4h_A 185 SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIYRRVTSGVK--PASFD------- 252 (290)
T ss_dssp TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHHHHHTTTCC--CGGGG-------
T ss_pred cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc--HHHHHHHHhccCC--ccccC-------
Confidence 2211 111233222 3578899999999999999999999975432 2222222222111 10111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....++.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111257899999999999999999999985
No 154
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.1e-36 Score=327.70 Aligned_cols=246 Identities=15% Similarity=0.164 Sum_probs=188.1
Q ss_pred Hhhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 383 ACEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 383 ~~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
..++|. +.||+|+||+||+|+.. +|+.||||++...... .......+.+|++++..++|||||++++++.+.+
T Consensus 67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~--~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~-- 142 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI--KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR-- 142 (410)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhh--hhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--
Confidence 344555 89999999999999985 6889999998642211 1112235889999999999999999999999877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT 539 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~ 539 (680)
..++|||||++|+|.++++.. .+++.....++.+++.||+|||+. +|+||||||+|||+|.++.+||+|||+++
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 789999999999999999643 589999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCC----cccccccCCCCC---------CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcc
Q 005734 540 IALPKSK----VSDDIENSVLPP---------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS 606 (680)
Q Consensus 540 ~~~~~~~----~~~~~~~~~~~~---------~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 606 (680)
....... .....+.|.+|+ .++.++|||||||++|||+||+.||...........+...... ..+
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~-~~~- 294 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS-LTF- 294 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH-CCC-
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc-ccC-
Confidence 7654321 111122333222 2678999999999999999999999865433333322211100 000
Q ss_pred cccCcccCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 005734 607 CMIDPSLKSFKQNELEAICEVIKECIKTDLRQ--RPTMNDIIVQ 648 (680)
Q Consensus 607 ~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~--RPtm~ev~~~ 648 (680)
+... ....++.+++.+|+..+|.+ ||+++||++.
T Consensus 295 ----p~~~----~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 295 ----PDDN----DISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ----CTTC----CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ----CCcc----cccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0000 11267889999999999988 9999999865
No 155
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=327.58 Aligned_cols=248 Identities=14% Similarity=0.175 Sum_probs=188.5
Q ss_pred Hhhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 383 ACEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 383 ~~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
..++|. +.||+|+||.||+++.. +|+.||||++...... .......+.+|.+++.+++|||||++++++.+.+
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~--~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~-- 134 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDML--KRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN-- 134 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH--HHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS--
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhh--hHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--
Confidence 345565 89999999999999985 7899999998643211 1122345889999999999999999999999877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT 539 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~ 539 (680)
..++||||+++|+|.+++... +..+++..+..++.+|+.||+|||+. +|+||||||+|||+|.++.+||+|||+++
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~ 210 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCL 210 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhhe
Confidence 789999999999999999643 23699999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCcc----cccccCCCC------------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC
Q 005734 540 IALPKSKVS----DDIENSVLP------------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR 603 (680)
Q Consensus 540 ~~~~~~~~~----~~~~~~~~~------------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~ 603 (680)
......... ...+.|.+| ..++.++|||||||++|||+||+.||...........+...... .
T Consensus 211 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~-~ 289 (412)
T 2vd5_A 211 KLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH-L 289 (412)
T ss_dssp ECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH-C
T ss_pred eccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC-c
Confidence 765432211 112233322 34688999999999999999999999865433333222211100 0
Q ss_pred CcccccCcccCCCCHHHHHHHHHHHHHccccCCCCC---CCHHHHHHH
Q 005734 604 NFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQR---PTMNDIIVQ 648 (680)
Q Consensus 604 ~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~R---Ptm~ev~~~ 648 (680)
.+ + ........++.+++.+|+. +|.+| |+++||.+.
T Consensus 290 ~~-----p---~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 290 SL-----P---LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp CC-----C-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred CC-----C---ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 00 0 0011223678999999999 99998 588888754
No 156
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.7e-36 Score=311.65 Aligned_cols=246 Identities=12% Similarity=0.183 Sum_probs=187.1
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+. .+++.||||++.... ...++.+|++++.+++|+|++..+++|..... ..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~e 85 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVME 85 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC----------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEEEE
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc-------cchHHHHHHHHHHHhcCCCCCCeeeeecCCCC-ceEEEEE
Confidence 38999999999999996 578999999865433 12357899999999999998888887754332 5799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~~~~ 543 (680)
|+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred cc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 99 999999997432 4699999999999999999999998 99999999999999 7889999999999987653
Q ss_pred CCCcc---------------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc---cHH-HHHHHHhcCCCC
Q 005734 544 KSKVS---------------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL---SIE-KWAADYLNEPRN 604 (680)
Q Consensus 544 ~~~~~---------------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~---~~~-~~~~~~~~~~~~ 604 (680)
..... ...|+......+++++|||||||++|||+||+.||...... ... .........+
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 238 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-- 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch--
Confidence 32110 11123333445688899999999999999999999753321 111 1112111111
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.. . .....+.++.+++.+||+.+|++|||+++|++.|+++....
T Consensus 239 ~~-~-------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 239 IE-V-------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HH-H-------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hh-h-------hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 00 0 00112367899999999999999999999999999986543
No 157
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=6.1e-36 Score=329.03 Aligned_cols=236 Identities=15% Similarity=0.178 Sum_probs=178.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+. .+|+.||||++...... .......+.+|++++++++||||++++++|.+.+ ..++||||
T Consensus 154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~lv~e~ 229 (446)
T 4ejn_A 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV--AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCFVMEY 229 (446)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC---------------CCCCCSCTTSCCEEEEEEETT--EEEEEECC
T ss_pred EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh--hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC--EEEEEEee
Confidence 8999999999999997 47899999998643211 1233456889999999999999999999999887 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHH-ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|++|+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++.......
T Consensus 230 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 304 (446)
T 4ejn_A 230 ANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304 (446)
T ss_dssp CSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc
Confidence 9999999999643 368999999999999999999998 6 899999999999999999999999999986442211
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+......++.++|||||||++|||+||+.||.......+...+ ......+. .
T Consensus 305 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i---~~~~~~~p-----------~ 370 (446)
T 4ejn_A 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI---LMEEIRFP-----------R 370 (446)
T ss_dssp --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HHCCCCCC-----------T
T ss_pred ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH---HhCCCCCC-----------c
Confidence 1 111233333456789999999999999999999999765433333222 22211111 1
Q ss_pred HHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRP-----TMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~ 647 (680)
....++.+++.+||+.||++|| +++|+++
T Consensus 371 ~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 371 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1226788999999999999999 9999986
No 158
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.2e-35 Score=332.19 Aligned_cols=242 Identities=13% Similarity=0.146 Sum_probs=190.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||.||+|+.. +|+.||||++....... ......+.+|++++.+++|||||++++++.+.+ ..++||||
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~--~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmEy 265 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTL 265 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh--hHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC--EEEEEEEc
Confidence 89999999999999985 79999999986543211 123456889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.......+++..+..++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 266 ~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~ 342 (576)
T 2acx_A 266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 342 (576)
T ss_dssp CCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCE
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCccc
Confidence 9999999999766555699999999999999999999998 9999999999999999999999999999876533221
Q ss_pred c-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc-cHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL-SIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...|+......++.++|||||||++|||+||+.||...... ............+..+. ..
T Consensus 343 ~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p-----------~~ 411 (576)
T 2acx_A 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS-----------ER 411 (576)
T ss_dssp ECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC-----------TT
T ss_pred cccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC-----------cc
Confidence 1 11233333345788899999999999999999999764322 22222222222211111 12
Q ss_pred HHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
...++.+++.+|++.||++|| +++||++.
T Consensus 412 ~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 412 FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 236789999999999999999 67888753
No 159
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-35 Score=315.99 Aligned_cols=253 Identities=13% Similarity=0.179 Sum_probs=184.6
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. +|+.||||++.............+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 93 (346)
T 1ua2_A 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISLVFDF 93 (346)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEEEEEC
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--ceEEEEEc
Confidence 89999999999999975 6899999998754322211222356889999999999999999999998777 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++ +|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 94 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 168 (346)
T 1ua2_A 94 MET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 168 (346)
T ss_dssp CSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred CCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceeccCCccc
Confidence 975 899888643 34689999999999999999999998 9999999999999999999999999999876432111
Q ss_pred c--------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--CcccccC-c----
Q 005734 548 S--------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR--NFSCMID-P---- 611 (680)
Q Consensus 548 ~--------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~d-~---- 611 (680)
. ...|+... ...++.++|||||||++|||++|+.||.+....+....+......+. ....... +
T Consensus 169 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 248 (346)
T 1ua2_A 169 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 248 (346)
T ss_dssp CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCC
T ss_pred CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCccccc
Confidence 1 11122222 23467889999999999999999999987654443333333222211 0110000 0
Q ss_pred --ccCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 612 --SLKSFK-----QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 612 --~l~~~~-----~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....+ .....++.+++.+|++.||++|||++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 249 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000001 2234679999999999999999999999875
No 160
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.5e-35 Score=314.88 Aligned_cols=239 Identities=14% Similarity=0.174 Sum_probs=179.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+++.. +|+.||||++..... ....+.+|+.++++++|||||++++++.+.+ ..++|||
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e 96 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA------IDENVQREIINHRSLRHPNIVRFKEVILTPT--HLAIIME 96 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT------SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc------ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--EEEEEEE
Confidence 389999999999999985 789999999865331 1245789999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC--eEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA--AKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--~ki~DFGla~~~~~~ 544 (680)
|+++|+|.+++... ..+++..+..++.++++||+|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 97 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 97 YASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred eCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 99999999999643 3699999999999999999999998 9999999999999987765 999999999754322
Q ss_pred CCc--ccccccCCC-----CCCCC-CCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 545 SKV--SDDIENSVL-----PPLAD-PETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 545 ~~~--~~~~~~~~~-----~~~~s-~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
... ....+.+.. ...++ .++|||||||++|||+||+.||..... ......+............ +.
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~---- 245 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD--DI---- 245 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCT--TS----
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCC--cC----
Confidence 111 111122222 22333 348999999999999999999976432 3334444443332211111 00
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+||+.||++|||+.|+++.
T Consensus 246 ---~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 246 ---RISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---CCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---CCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 112578899999999999999999999875
No 161
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.7e-35 Score=299.64 Aligned_cols=238 Identities=13% Similarity=0.225 Sum_probs=184.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +|+.||||++...... ...+.+.+|++++++++||||+++++++.+.+ ..++|+|
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 85 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV----DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLE 85 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT----THHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch----hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC--EEEEEEE
Confidence 389999999999999975 7899999998654322 23467899999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 86 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred ecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999999999643 4689999999999999999999998 999999999999999999999999999976532110
Q ss_pred ----------cccccccCCCCCC-CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 547 ----------VSDDIENSVLPPL-ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 547 ----------~~~~~~~~~~~~~-~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.....|+...... .+.++||||||++++||+||+.||......... + ........... .
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~-~~~~~~~~~~~-----~--- 230 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-Y-SDWKEKKTYLN-----P--- 230 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH-H-HHHHTTCTTST-----T---
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH-H-HHhhhcccccC-----c---
Confidence 1112233332222 366799999999999999999999764422111 1 11111111100 0
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.......+.+++.+|++.||++|||++|+++
T Consensus 231 -~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 -WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 1122357889999999999999999999976
No 162
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=305.18 Aligned_cols=238 Identities=16% Similarity=0.239 Sum_probs=182.0
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+||+|+||.||+|.. .++..||||.+..... ...+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 100 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-----RYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQ 100 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC--------HHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCch-----HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--cEEEEEEe
Confidence 5899999999999996 5788999998865432 23457899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeEEcccccccccCCCC
Q 005734 468 APNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-DYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~ki~DFGla~~~~~~~ 545 (680)
+++|+|.+++.... ...+++..+..++.++++||+|||+. +|+||||||+||+++. ++.+||+|||+++......
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999997543 34578999999999999999999998 9999999999999987 8999999999998764321
Q ss_pred Ccc---cccccCCCC-------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 546 KVS---DDIENSVLP-------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 546 ~~~---~~~~~~~~~-------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
... ...+.+..| ..++.++||||||+++|||+||+.||.....................
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----------- 246 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE----------- 246 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCC-----------
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccc-----------
Confidence 111 111122222 22678899999999999999999999754322211111111111111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.....++.+++.+||+.||++||++.|+++
T Consensus 247 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 247 IPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11222367889999999999999999999985
No 163
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.8e-35 Score=300.56 Aligned_cols=238 Identities=17% Similarity=0.236 Sum_probs=185.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... ++..+|+|++...... ..+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 86 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE-----DVDRFKQEIEIMKSLDHPNIIRLYETFEDNT--DIYLVME 86 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS-----CHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc-----hHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--eEEEEEe
Confidence 389999999999999975 5778999988654322 2457899999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+.+|+.+++.||+|||+. +|+||||||+||++ +.++.+||+|||++.....
T Consensus 87 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 87 LCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred ccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 99999999998643 3589999999999999999999998 99999999999999 7889999999999987653
Q ss_pred CCCccc--ccccCCC----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 544 KSKVSD--DIENSVL----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 544 ~~~~~~--~~~~~~~----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
...... ..+.+.. .+.+++++||||||++++||+||+.||...........+. ........ ....
T Consensus 162 ~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~---~~~~--- 232 (277)
T 3f3z_A 162 GKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIR---EGTFTFPE---KDWL--- 232 (277)
T ss_dssp TSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCCCCCCH---HHHT---
T ss_pred ccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHH---hCCCCCCc---hhhh---
Confidence 322111 1111221 2347889999999999999999999997654333322222 11111110 0000
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++.+++.+|++.||++|||+.++++
T Consensus 233 -~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 233 -NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 12367889999999999999999999986
No 164
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.6e-35 Score=311.01 Aligned_cols=249 Identities=18% Similarity=0.315 Sum_probs=189.4
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHc--CCCCcccceeeEEecCCC--CceE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSR--INHKNFVNLIGYCEDDEP--FNRM 462 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~~--~~~~ 462 (680)
+.+.||+|+||.||+|+. +|+.||||++.... ...+.+|++++.. ++||||+++++++..... ...+
T Consensus 46 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--------~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~ 116 (342)
T 1b6c_B 46 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116 (342)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG--------HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred EEeeecCCCCcEEEEEEE-cCccEEEEEeCchh--------HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeE
Confidence 348999999999999998 48899999985322 3457788888887 789999999999987642 1469
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeecCCCCCCeeecCCCCeEEcc
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMH--------HELNPPVAHSNLSSHCIYLTDDYAAKVAE 534 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH--------~~~~~~ivHrDlKp~NILld~~~~~ki~D 534 (680)
+||||+++|+|.+++... .+++..+++++.+++.||+||| +. +|+||||||+|||++.++.+||+|
T Consensus 117 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~D 190 (342)
T 1b6c_B 117 LVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIAD 190 (342)
T ss_dssp EEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEECC
T ss_pred EEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEEE
Confidence 999999999999999643 5899999999999999999999 55 999999999999999999999999
Q ss_pred cccccccCCCCCc-------ccccccCCCCC-----------CCCCCCCeeehhHHHHHHHhC----------CCCCCcc
Q 005734 535 ICFTTIALPKSKV-------SDDIENSVLPP-----------LADPETNIYSFGILMLEIISG----------KLPYCEE 586 (680)
Q Consensus 535 FGla~~~~~~~~~-------~~~~~~~~~~~-----------~~s~~sDVySfGvvllElltG----------~~p~~~~ 586 (680)
||+++........ ....+.+..|+ ..++++|||||||++|||+|| +.||...
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~ 270 (342)
T 1b6c_B 191 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 270 (342)
T ss_dssp CTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence 9999776533211 01112222222 122579999999999999999 7787643
Q ss_pred cc--ccHHHHHHHHhcCCCCcccccCcccCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 587 KE--LSIEKWAADYLNEPRNFSCMIDPSLKS--FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 587 ~~--~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.. .....+....... . ..+.+.. ...++...+.+++.+||+.||++|||+++|+++|+++....
T Consensus 271 ~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 271 VPSDPSVEEMRKVVCEQ-K-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp SCSSCCHHHHHHHHTTS-C-----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CcCcccHHHHHHHHHHH-H-----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 21 2233333322221 1 1121111 12456778999999999999999999999999999987543
No 165
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3e-35 Score=310.93 Aligned_cols=256 Identities=18% Similarity=0.297 Sum_probs=180.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHH--HHHHHHcCCCCcccceeeEEec---CCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRK--QVDTLSRINHKNFVNLIGYCED---DEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~--E~~~l~~l~H~niv~l~g~~~~---~~~~~~~ 462 (680)
.+.||+|+||.||+|+. +++.||||++.... ...+.. |+..+..++|+||+++++++.. .+....+
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc--------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 38999999999999987 68899999986432 122333 4444556899999999986642 2222458
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------CCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL------NPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~------~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
+||||+++|+|.+++... ..+|..+.+|+.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 89 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 999999999999999644 3589999999999999999999873 3489999999999999999999999999
Q ss_pred cccccCCCCCcc-----------cccccCCCC------------CCCCCCCCeeehhHHHHHHHhCCCCCCccccc-c--
Q 005734 537 FTTIALPKSKVS-----------DDIENSVLP------------PLADPETNIYSFGILMLEIISGKLPYCEEKEL-S-- 590 (680)
Q Consensus 537 la~~~~~~~~~~-----------~~~~~~~~~------------~~~s~~sDVySfGvvllElltG~~p~~~~~~~-~-- 590 (680)
+++......... ...+.+.+| ..+++++|||||||++|||+||+.|+...... .
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 998764321100 011122222 23346789999999999999998776432110 0
Q ss_pred -----------HHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 591 -----------IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 591 -----------~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
............. ....+.... ........++.+++.+||+.||++|||++|+++.|+++...-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREK-QRPKFPEAW-KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSC-CCCCCCTTC-CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HhhhcccCCCchHHHHHhhhcccc-cCCCCCccc-ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 0011111111111 010111111 1123466789999999999999999999999999999975443
No 166
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=5.8e-36 Score=310.32 Aligned_cols=246 Identities=12% Similarity=0.175 Sum_probs=188.4
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+. .+|+.||||++..... ..++.+|++++++++|++++..++++...+. ..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~e 85 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVME 85 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-------CCHHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEEEE
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-------hhHHHHHHHHHHHhhcCCCCCccccccCCCC-ceEEEEE
Confidence 38999999999999996 6789999998865432 2358899999999999998887777754432 5799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~~~~ 543 (680)
|+ +|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99 999999996433 4699999999999999999999998 99999999999999 5889999999999987653
Q ss_pred CCCcc---------------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc---ccHHHH-HHHHhcCCCC
Q 005734 544 KSKVS---------------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE---LSIEKW-AADYLNEPRN 604 (680)
Q Consensus 544 ~~~~~---------------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~---~~~~~~-~~~~~~~~~~ 604 (680)
..... ...|+......+++++|||||||++|||+||+.||..... ...... .......+
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 238 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-- 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc--
Confidence 32110 1112223334567889999999999999999999975321 122222 22222111
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
. ... ....+.++.+++.+||+.||++|||+++|++.|+++....
T Consensus 239 ~-~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 239 I-EVL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp H-HHH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred h-HHH-------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 0 000 0112367899999999999999999999999999987554
No 167
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=8.1e-36 Score=308.17 Aligned_cols=232 Identities=13% Similarity=0.077 Sum_probs=180.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++....... ....+.|.+|++++.+++||||+++++++.+.+ ..++|||
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 111 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP--DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA--GGLVVAE 111 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccC--HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC--cEEEEEE
Confidence 379999999999999985 58999999987543221 344577999999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ....+..+|+.|++.||+|||+. +|+||||||+|||+++++.+||+++|..
T Consensus 112 ~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~-------- 176 (286)
T 3uqc_A 112 WIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATM-------- 176 (286)
T ss_dssp CCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCC--------
T ss_pred ecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecccc--------
Confidence 99999999999532 35567899999999999999998 9999999999999999999999866532
Q ss_pred cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHH
Q 005734 547 VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICE 626 (680)
Q Consensus 547 ~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 626 (680)
..++.++|||||||++|||+||+.||.+....+........... .. +.........+.++.+
T Consensus 177 -----------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~l~~ 238 (286)
T 3uqc_A 177 -----------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAG------QP-IEPADIDRDIPFQISA 238 (286)
T ss_dssp -----------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTS------CB-CCHHHHCTTSCHHHHH
T ss_pred -----------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhcc------CC-CChhhcccCCCHHHHH
Confidence 13678999999999999999999999764422100000000000 00 0000111223467899
Q ss_pred HHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 627 VIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 627 l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
++.+||+.||++| |+.|+++.|+++.....
T Consensus 239 li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 239 VAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred HHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 9999999999999 99999999999876543
No 168
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.2e-35 Score=302.74 Aligned_cols=249 Identities=16% Similarity=0.225 Sum_probs=190.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+++.. +|+.||||++......... ....+.+.+|++++++++||||+++++++.+.. ..++||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 87 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--DVVLIL 87 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC--eEEEEE
Confidence 489999999999999986 7899999998765422110 112457899999999999999999999999877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeEEccccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY----AAKVAEICFTTIA 541 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~ki~DFGla~~~ 541 (680)
||+++++|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++ .+||+|||+++..
T Consensus 88 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 88 ELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred eecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 999999999999643 3689999999999999999999998 999999999999998877 8999999999876
Q ss_pred CCCCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 542 LPKSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 542 ~~~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
...... ....|+......++.++||||||++++||+||+.||...........+ ........ +..
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~----~~~- 234 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI---SAVNYDFD----EEY- 234 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HTTCCCCC----HHH-
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHh---HhcccCCc----chh-
Confidence 432211 112234334456788999999999999999999999765433222222 11111111 000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVI 653 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~ 653 (680)
.......+.+++.+|++.||++||++.|+++. ++.+.
T Consensus 235 --~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 235 --FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp --HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred --cccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 01123578899999999999999999999973 45543
No 169
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.5e-35 Score=307.82 Aligned_cols=250 Identities=14% Similarity=0.205 Sum_probs=186.4
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. +|+.||||++...... ......+.+|++++++++||||+++++++...+ ..++||||
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET---EGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEF 83 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC-----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccc---hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC--ceEEEEEc
Confidence 78999999999999985 7899999988654311 122356889999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
++ |+|.+++.......+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 84 ~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 84 LH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp CS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred cc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 97 6999999766556799999999999999999999998 9999999999999999999999999999876432111
Q ss_pred c--------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcc--c-----ccCc
Q 005734 548 S--------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS--C-----MIDP 611 (680)
Q Consensus 548 ~--------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~d~ 611 (680)
. ...|+.... ..++.++||||||+++|||+||+.||......+....+......+.... . ...+
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccch
Confidence 1 112222222 2368899999999999999999999987554333332322222211100 0 0001
Q ss_pred ccCC--------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 612 SLKS--------FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 612 ~l~~--------~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.. .......++.+++.+|++.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1100 01122367889999999999999999999986
No 170
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=7.3e-35 Score=303.62 Aligned_cols=239 Identities=13% Similarity=0.248 Sum_probs=186.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+++.. +|+.||||++..... .....+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 86 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-----FRDSSLENEIAVLKKIKHENIVTLEDIYESTT--HYYLVMQ 86 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC-----------HHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccc-----cchHHHHHHHHHHHhCCCCCeeehhhhcccCC--EEEEEEE
Confidence 489999999999999975 789999999875431 22356889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||++ ++++.+||+|||+++....
T Consensus 87 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 87 LVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred cCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 99999999998643 3689999999999999999999998 99999999999999 7889999999999876543
Q ss_pred CCC------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 544 KSK------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 544 ~~~------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
... .....|+......++.++||||||+++|||+||+.||.......+...+.. ....... + ..
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~---~~~~~~~---~----~~ 231 (304)
T 2jam_A 162 GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE---GYYEFES---P----FW 231 (304)
T ss_dssp BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---CCCCCCT---T----TT
T ss_pred CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc---CCCCCCc---c----cc
Confidence 211 112234444445568889999999999999999999976543333332222 1111110 0 11
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+|++.||++|||++|+++.
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 232 DDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1223678999999999999999999999864
No 171
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.1e-35 Score=309.95 Aligned_cols=242 Identities=13% Similarity=0.163 Sum_probs=187.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||+|... +|+.||||++....... ....++.+|+.++.+++ ||||+++++++.+.+ ..++|||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~--~~~lv~e 109 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ---DCRAEILHEIAVLELAKSCPRVINLHEVYENTS--EIILILE 109 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE---ECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch---HHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC--eEEEEEE
Confidence 78999999999999975 68999999987543221 22457899999999995 699999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++.......+++..+..|+.+++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 110 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 186 (327)
T 3lm5_A 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186 (327)
T ss_dssp CCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence 99999999999765556899999999999999999999998 9999999999999998 78999999999987653
Q ss_pred CCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 544 KSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 544 ~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.... ....|+......++.++||||||+++|||+||+.||...........+...... ... + .
T Consensus 187 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~---~~~---~----~ 256 (327)
T 3lm5_A 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVD---YSE---E----T 256 (327)
T ss_dssp -------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC---CCT---T----T
T ss_pred ccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccc---cCc---h----h
Confidence 2211 112234344456788999999999999999999999765433332222221111 110 1 1
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.......+.+++.+|++.||++|||++++++.
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 257 FSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred hcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 11223678899999999999999999999864
No 172
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.5e-35 Score=313.52 Aligned_cols=237 Identities=12% Similarity=0.111 Sum_probs=184.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+|+.. +|+.||||++...... .......+..|.+++..+ +||||+++++++.+.+ ..++||
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~--~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv~ 100 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI--QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFVM 100 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH--HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC--EEEEEE
Confidence 389999999999999986 5788999998653211 122345688999999988 7999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ..+++..+..++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 101 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 101 EYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 999999999999643 3589999999999999999999998 99999999999999999999999999998643221
Q ss_pred Cc---c-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 KV---S-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~~---~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.. . ...|+......++.++|||||||++|||++|+.||.......+.. ........+ +
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~---~i~~~~~~~-----------p 241 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ---SIMEHNVAY-----------P 241 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHCCCCC-----------C
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHH---HHHhCCCCC-----------C
Confidence 11 1 112333334567889999999999999999999998654333332 222221111 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPT-----MNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPt-----m~ev~~ 647 (680)
.....++.+++.+|++.||++||+ ++||.+
T Consensus 242 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 242 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 122367889999999999999996 466654
No 173
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.7e-35 Score=302.65 Aligned_cols=238 Identities=15% Similarity=0.252 Sum_probs=187.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. ++..||||++....... ......+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 94 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK--EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK--RIYLMLE 94 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccch--HHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC--EEEEEEE
Confidence 389999999999999975 67889999886432111 122457899999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++.... .+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 95 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 95 FAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp CCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred eCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 999999999996543 589999999999999999999998 999999999999999999999999999876542211
Q ss_pred c------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 547 V------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 547 ~------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
. ....|+......++.++||||||+++|||+||+.||......... .........+ +...
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~-----------~~~~ 235 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH---RRIVNVDLKF-----------PPFL 235 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---HHHHTTCCCC-----------CTTS
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHH---HHHhccccCC-----------CCcC
Confidence 1 112233334456788999999999999999999999764422222 2222211111 1112
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..++.+++.+|++.||++||+++++++.
T Consensus 236 ~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 236 SDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 3578899999999999999999999863
No 174
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.1e-35 Score=311.02 Aligned_cols=238 Identities=15% Similarity=0.203 Sum_probs=187.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++... +++.+|+|++....... ....+.+.+|++++++++|+||+++++++.+.+ ..++|||
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 121 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLE 121 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEe
Confidence 389999999999999985 57889999886543221 345567999999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 122 ~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 122 LCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp CCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred cCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 99999999998643 3689999999999999999999998 999999999999999999999999999987642211
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+......++.++||||||+++|||+||+.||......+... ........+. .
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~-----------~ 262 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL---RIKKNEYSIP-----------K 262 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---HHHHTCCCCC-----------T
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH---HHhcCCCCCC-----------c
Confidence 11 111222233456889999999999999999999997644222222 2211111111 1
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+||+.||++||+++|+++.
T Consensus 263 ~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 263 HINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 122578899999999999999999999874
No 175
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.3e-35 Score=316.36 Aligned_cols=237 Identities=16% Similarity=0.272 Sum_probs=181.5
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC--CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN--HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||++...+++.||||++...... ......|.+|++++.+++ |||||++++++...+ ..++|||
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~E 136 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD---NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVME 136 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEeccccc---HHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC--EEEEEEe
Confidence 899999999999999888999999998754322 344577999999999996 599999999999877 6899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
+.+|+|.+++.... .+++..+..|+.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.......
T Consensus 137 -~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 137 -CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp -CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred -cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 56889999997543 689999999999999999999998 999999999999996 57899999999987643211
Q ss_pred c-----ccccccCCCC----------------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 547 V-----SDDIENSVLP----------------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 547 ~-----~~~~~~~~~~----------------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
. ....+.|.+| ..+++++|||||||++|||+||+.||.... .....+..........
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~--~~~~~~~~~~~~~~~~ 287 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--NQISKLHAIIDPNHEI 287 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC--CHHHHHHHHHCTTSCC
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh--HHHHHHHHHhCccccC
Confidence 1 1111222221 357888999999999999999999997542 1222222332221110
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. .+.....++.+++.+||+.||++|||+.|+++.
T Consensus 288 ~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 288 E---------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp C---------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C---------CCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 0 111112578899999999999999999999865
No 176
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.7e-36 Score=309.54 Aligned_cols=248 Identities=17% Similarity=0.234 Sum_probs=182.2
Q ss_pred ccccCCCCCCeEEEEEeC--CCC--EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS--SGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~--~g~--~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||+||+|+.. ++. .||||++...... .....+.|.+|++++++++||||+++++++.... .++
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~~ 97 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP---MKM 97 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC----------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---CEE
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC---cee
Confidence 389999999999999863 333 5888887643211 1234568999999999999999999999998754 589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+++|+|.+++.... ..+++..+.+++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 98 VTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999997432 3589999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 544 KSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 544 ~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
..... ...|+......++.++||||||+++|||+| |+.||......... ...........
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~---~~~~~~~~~~~----- 245 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL---HKIDKEGERLP----- 245 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH---HHHHTSCCCCC-----
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHH---HHHHccCCCCC-----
Confidence 32111 111222222345778999999999999999 99999765433322 22222211110
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.....+.++.+++.+||+.+|++|||+.++++.|+++....
T Consensus 246 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 246 ----RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ----CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 11123367899999999999999999999999999886543
No 177
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.6e-35 Score=323.90 Aligned_cols=249 Identities=13% Similarity=0.194 Sum_probs=183.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||+||+|... +|+.||||++..... .....+.+.+|++++++++|||||++++++..... ...++
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~l 144 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ---NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 144 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGGG---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEE
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECcccc---ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEE
Confidence 78999999999999864 689999999865421 13445678999999999999999999999975431 14699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|||||++ +|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 145 v~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 145 VMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp EEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred EEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 9999975 57666642 489999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-------------
Q 005734 544 KSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR------------- 603 (680)
Q Consensus 544 ~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~------------- 603 (680)
..... ...|+......++.++||||+||+++||++|+.||.+....+....+...+..+.
T Consensus 217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~ 296 (464)
T 3ttj_A 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296 (464)
T ss_dssp CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHH
T ss_pred CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhh
Confidence 32111 1223333445678999999999999999999999987554333333322222110
Q ss_pred ------Ccc-----cccCcccC-C---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 604 ------NFS-----CMIDPSLK-S---FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 604 ------~~~-----~~~d~~l~-~---~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
... ..+...+. . .......++.+|+.+|++.||++|||++|+++.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 00000000 0 011225678999999999999999999999874
No 178
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=9.8e-37 Score=327.94 Aligned_cols=235 Identities=13% Similarity=0.147 Sum_probs=173.5
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHH---HHHHcCCCCccccee-------eEEecCC
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQV---DTLSRINHKNFVNLI-------GYCEDDE 457 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~---~~l~~l~H~niv~l~-------g~~~~~~ 457 (680)
+.||+|+||.||+|+. .+|+.||||++....... ....+.|.+|+ +.+++++|||||+++ +++.+.+
T Consensus 79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 156 (377)
T 3byv_A 79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP--SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 156 (377)
T ss_dssp EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CC--TTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTT
T ss_pred ceeecCCCEEEEEEEECCCCcEEEEEEEeeccccc--hHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccC
Confidence 8999999999999996 579999999987543221 23456789999 556666899999998 5555442
Q ss_pred C------------C---ceEEEEEecCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 005734 458 P------------F---NRMMVFEYAPNGTVFEHLHIKE-----MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517 (680)
Q Consensus 458 ~------------~---~~~lV~ey~~~GsL~~~l~~~~-----~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDl 517 (680)
. . ..++||||+ +|+|.+++.... ...++|..+++|+.||++||+|||+. +|+||||
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDi 232 (377)
T 3byv_A 157 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 232 (377)
T ss_dssp SCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 1 0 168999999 689999997431 12355789999999999999999998 9999999
Q ss_pred CCCCeeecCCCCeEEcccccccccCCCCCcc----cccccCCCCC-----------CCCCCCCeeehhHHHHHHHhCCCC
Q 005734 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVS----DDIENSVLPP-----------LADPETNIYSFGILMLEIISGKLP 582 (680)
Q Consensus 518 Kp~NILld~~~~~ki~DFGla~~~~~~~~~~----~~~~~~~~~~-----------~~s~~sDVySfGvvllElltG~~p 582 (680)
||+|||++.++.+||+|||+++......... ...||..... .++.++|||||||++|||+||+.|
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~P 312 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred CHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999998654321111 1122222222 578899999999999999999999
Q ss_pred CCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 583 YCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
|.+....... ..+.. ... ....++.+++.+||+.||++|||+.|+++
T Consensus 313 f~~~~~~~~~-------------~~~~~-~~~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 313 ITKDAALGGS-------------EWIFR-SCK----NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp C------CCS-------------GGGGS-SCC----CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred Ccccccccch-------------hhhhh-hcc----CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9654321110 00100 001 12367889999999999999999999986
No 179
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.2e-35 Score=309.73 Aligned_cols=238 Identities=16% Similarity=0.257 Sum_probs=181.4
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC--CcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH--KNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||++...+++.||||++...... ....+.|.+|++++.+++| +||+++++++.+++ ..++||
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~ 88 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD---NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVM 88 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccc---hHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC--EEEEEE
Confidence 3899999999999999989999999998754322 3445679999999999986 99999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|| .+|+|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 89 e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 89 EC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred eC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 95 588999999754 4689999999999999999999998 999999999999997 5779999999998764322
Q ss_pred Cc-----ccccccCCC----------------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC
Q 005734 546 KV-----SDDIENSVL----------------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN 604 (680)
Q Consensus 546 ~~-----~~~~~~~~~----------------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 604 (680)
.. ....+.+.. ...+++++|||||||++|||+||+.||.... ...............
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~~~~~~~~~ 239 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--NQISKLHAIIDPNHE 239 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC--SHHHHHHHHHCTTSC
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh--hHHHHHHHHhcCCcc
Confidence 11 011112221 1456788999999999999999999997533 122222222222111
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. ..+.....++.+++.+||+.||++|||+.|+++.
T Consensus 240 ~---------~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 240 I---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp C---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred c---------CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 0 0111122578899999999999999999999875
No 180
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.2e-35 Score=301.63 Aligned_cols=238 Identities=16% Similarity=0.274 Sum_probs=185.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++...... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 91 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR--SLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT--DFFMVME 91 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEecccccc--chhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--eEEEEEe
Confidence 389999999999999985 7899999998643211 1123457899999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 92 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 92 YVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp CCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred ccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 99999999999643 3589999999999999999999998 999999999999999999999999999987653221
Q ss_pred cc-------cccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS-------DDIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~-------~~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+..... ..+.++||||||++++||+||+.||.........+.+.. ..... +.
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~-----------~~ 232 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG---GVFYI-----------PE 232 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CCCCC-----------CT
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc---CcccC-----------ch
Confidence 11 1123332222 235789999999999999999999976543333222221 11111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||++|+++.
T Consensus 233 ~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 233 YLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 122578899999999999999999999874
No 181
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.2e-35 Score=306.19 Aligned_cols=235 Identities=12% Similarity=0.179 Sum_probs=182.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||+||+|... +++.||||++...... .....++.+|+..+.++ +||||+++++++.+.+ ..++|||
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~--~~~lv~e 91 (289)
T 1x8b_A 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG---SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD--HMLIQNE 91 (289)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT---SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT--EEEEEEE
T ss_pred hhhcCCCceEEEEEEEcCCCceEEEEEecccccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEEEEEE
Confidence 89999999999999985 7899999998754322 23456788999999999 8999999999999877 7799999
Q ss_pred ecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC------------------
Q 005734 467 YAPNGTVFEHLHIKE--MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD------------------ 526 (680)
Q Consensus 467 y~~~GsL~~~l~~~~--~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~------------------ 526 (680)
|+++|+|.+++.... ...+++..+.+|+.|+++||+|||+. +|+||||||+||+++.
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~ 168 (289)
T 1x8b_A 92 YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS 168 (289)
T ss_dssp CCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-------------------
T ss_pred ecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccccC
Confidence 999999999997432 25689999999999999999999998 9999999999999984
Q ss_pred -CCCeEEcccccccccCCCCCccc----ccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhc
Q 005734 527 -DYAAKVAEICFTTIALPKSKVSD----DIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLN 600 (680)
Q Consensus 527 -~~~~ki~DFGla~~~~~~~~~~~----~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~ 600 (680)
...+||+|||+++.........+ ..|+..... ..++++||||||++++||++|+.++.... ....+. .
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~---~ 242 (289)
T 1x8b_A 169 NKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEIR---Q 242 (289)
T ss_dssp -CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHHH---T
T ss_pred CceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHHH---c
Confidence 44799999999987654322211 123322222 45578999999999999999998765432 111111 1
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
. ... ..+.....++.+++.+||+.||++|||+.|+++
T Consensus 243 ~--~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 243 G--RLP--------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp T--CCC--------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred C--CCC--------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1 000 111122367899999999999999999999985
No 182
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.3e-35 Score=315.25 Aligned_cols=266 Identities=14% Similarity=0.134 Sum_probs=190.6
Q ss_pred HHHHHHhhhhc--cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchh------hHHHHHHHHHHHHHHHHcCCCCcccce
Q 005734 378 LELDTACEDFS--NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKD------WLKSQEMAYRKQVDTLSRINHKNFVNL 449 (680)
Q Consensus 378 ~~l~~~~~~~~--~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~------~~~~~~~~f~~E~~~l~~l~H~niv~l 449 (680)
.++......|. +.||+|+||.||+|...+|..||||++....... ......+.+.+|++++++++||||+++
T Consensus 15 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 94 (362)
T 3pg1_A 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGL 94 (362)
T ss_dssp HHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred HHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccce
Confidence 34555556665 8999999999999999889999999986543221 112345689999999999999999999
Q ss_pred eeEEecCC---CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 005734 450 IGYCEDDE---PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526 (680)
Q Consensus 450 ~g~~~~~~---~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~ 526 (680)
++++...+ ....++||||++ |+|.+++... ...+++..+..|+.+++.||+|||+. +|+||||||+||+++.
T Consensus 95 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 95 RDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLAD 169 (362)
T ss_dssp SEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred eeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcC
Confidence 99986432 124699999997 6899888743 34699999999999999999999998 9999999999999999
Q ss_pred CCCeEEcccccccccCCCCCcc-------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHH
Q 005734 527 DYAAKVAEICFTTIALPKSKVS-------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADY 598 (680)
Q Consensus 527 ~~~~ki~DFGla~~~~~~~~~~-------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~ 598 (680)
++.+||+|||+++......... ...|+.... ..++.++|||||||++|||+||+.||.+.........+...
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~ 249 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249 (362)
T ss_dssp TCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred CCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 9999999999997654322111 122332222 45788999999999999999999999865433333333222
Q ss_pred hcCCCC------------------cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 599 LNEPRN------------------FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 599 ~~~~~~------------------~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...+.. ...................+.+++.+|++.||++|||++|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 221110 00000000000111223578899999999999999999999874
No 183
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.1e-35 Score=306.22 Aligned_cols=237 Identities=16% Similarity=0.247 Sum_probs=189.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|++++++++||||+++++++.+.. ..++||||
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 101 (303)
T 3a7i_A 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE----DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWIIMEY 101 (303)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS----TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred hhhcccCCeEEEEEEECCCCcEEEEEEecccccH----HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEEEEe
Confidence 8899999999999986 47899999998654322 23467899999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 102 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 175 (303)
T 3a7i_A 102 LGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175 (303)
T ss_dssp CTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence 999999999863 3689999999999999999999998 9999999999999999999999999999776532211
Q ss_pred c--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...|+......++.++||||||+++|||+||+.||...........+..... .. + ...
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~----~-------~~~ 242 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP--PT----L-------EGN 242 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC--CC----C-------CSS
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCC--CC----C-------ccc
Confidence 1 1223333445678899999999999999999999976543333222221110 00 1 111
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
....+.+++.+||+.+|++|||+.|+++..-
T Consensus 243 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 243 YSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred cCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 2357899999999999999999999998643
No 184
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.2e-35 Score=311.35 Aligned_cols=248 Identities=11% Similarity=0.160 Sum_probs=180.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|.. .+|+.||||++...... ......+.+|++++++++|||||++++++.+.+ ..++||||
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 114 (329)
T 3gbz_A 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE---EGVPGTAIREVSLLKELQHRNIIELKSVIHHNH--RLHLIFEY 114 (329)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECCCCC-----------CHHHHHHGGGCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred EEEEecCCeEEEEEEECCCCceEEEEEEcccccc---cccchhHHHHHHHHHHcCCCCcceEEEEEecCC--EEEEEEec
Confidence 8999999999999986 47899999998654321 233456889999999999999999999999887 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-----cCCCCeEEcccccccccC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL-----TDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl-----d~~~~~ki~DFGla~~~~ 542 (680)
++ |+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++...
T Consensus 115 ~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 115 AE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp CS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred CC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 97 59999996543 589999999999999999999998 99999999999999 455569999999998764
Q ss_pred CCCCc--------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--ccccc-C
Q 005734 543 PKSKV--------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCMI-D 610 (680)
Q Consensus 543 ~~~~~--------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~-d 610 (680)
..... ....|+.... ..++.++|||||||++|||+||+.||......+....+......+.. ..... .
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL 268 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh
Confidence 22111 1122333222 34789999999999999999999999865544333333332222110 00000 0
Q ss_pred c----cc---CCC------CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 611 P----SL---KSF------KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 611 ~----~l---~~~------~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+ .. ... ......++.+++.+|++.||++|||++|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 00 000 0112367889999999999999999999986
No 185
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=315.38 Aligned_cols=239 Identities=8% Similarity=0.135 Sum_probs=186.1
Q ss_pred cccCCCCCCeEEEEE------eCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC---CCcccceeeEEecCCCC
Q 005734 389 NIIDTQSGCTIYKGT------LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN---HKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~------~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~ 459 (680)
+.||+|+||+||+|. ..+++.||||++.... ..++..|++++.+++ |+||+++++++...+
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~-- 140 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--------PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN-- 140 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSCC--------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS--
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC--------hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC--
Confidence 899999999999994 4578899999986432 345778888888886 999999999999887
Q ss_pred ceEEEEEecCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC----------
Q 005734 460 NRMMVFEYAPNGTVFEHLHIK---EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---------- 526 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~---~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---------- 526 (680)
..++|||||++|+|.+++... ....++|..++.|+.|+++||+|||+. +|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccccc
Confidence 679999999999999999632 345799999999999999999999998 9999999999999998
Q ss_pred -CCCeEEcccccccccCC---CC-------CcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHH
Q 005734 527 -DYAAKVAEICFTTIALP---KS-------KVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA 595 (680)
Q Consensus 527 -~~~~ki~DFGla~~~~~---~~-------~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~ 595 (680)
++.+||+|||+++.... .. +.....||......++.++|||||||++|||+||+.||.......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----- 292 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----- 292 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----
Confidence 89999999999975431 11 111222344444567899999999999999999999986432110
Q ss_pred HHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCC-CCHHHHHHHHHHhhccCCC
Q 005734 596 ADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQR-PTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 596 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~R-Ptm~ev~~~L~~i~~~~~~ 658 (680)
......+...+ ..+.+.+++..|++.+|.+| |+++++.+.|+++......
T Consensus 293 -----------~~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~~ 343 (365)
T 3e7e_A 293 -----------CKPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYT 343 (365)
T ss_dssp -----------EEECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHTT
T ss_pred -----------eeechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhhh
Confidence 00111111111 13567789999999999999 5799999999998766443
No 186
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5.4e-35 Score=326.10 Aligned_cols=236 Identities=11% Similarity=0.157 Sum_probs=185.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||.||+++.. +|+.||||++....... ......+.+|++++++++|||||++++++.+.. ..++||||
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~--~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmE~ 266 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK--RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT--DLCLVMTI 266 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh--hHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC--EEEEEEEe
Confidence 78999999999999985 69999999986543211 123457889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 468 APNGTVFEHLHIKE--MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~--~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
+++|+|.+++.... ...+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~ 343 (543)
T 3c4z_A 267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343 (543)
T ss_dssp CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCC
Confidence 99999999997543 45699999999999999999999998 99999999999999999999999999998765332
Q ss_pred Ccc---ccc-----ccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 546 KVS---DDI-----ENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 546 ~~~---~~~-----~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
... ... |+......++.++|||||||++|||+||+.||..... ....+...........+
T Consensus 344 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~----------- 412 (543)
T 3c4z_A 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY----------- 412 (543)
T ss_dssp CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCC-----------
T ss_pred cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCC-----------
Confidence 111 112 2333344678899999999999999999999976432 22333333333322111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTM 642 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm 642 (680)
+.....++.+++.+|++.||++||++
T Consensus 413 p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 413 PDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred CcccCHHHHHHHHHhccCCHhHCCCC
Confidence 11223678899999999999999976
No 187
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.8e-35 Score=311.66 Aligned_cols=251 Identities=11% Similarity=0.145 Sum_probs=187.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhH------------HHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWL------------KSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~------------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
.+.||+|+||.||+|.. +|+.||||++......... ......|.+|++++++++||||+++++++.+
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 38999999999999999 8999999998643211100 0011679999999999999999999999998
Q ss_pred CCCCceEEEEEecCCCChhhh------hccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCC
Q 005734 456 DEPFNRMMVFEYAPNGTVFEH------LHIKEMDHLDWNARMRIIMGTAYCLQYMHH-ELNPPVAHSNLSSHCIYLTDDY 528 (680)
Q Consensus 456 ~~~~~~~lV~ey~~~GsL~~~------l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~ 528 (680)
.+ ..++||||+++|+|.++ +.......+++..+..++.+++.||+|||+ . +|+||||||+||+++.++
T Consensus 115 ~~--~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~~~ 189 (348)
T 2pml_X 115 YD--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDKNG 189 (348)
T ss_dssp SS--EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECTTS
T ss_pred CC--eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcCCC
Confidence 77 78999999999999999 655446789999999999999999999998 7 999999999999999999
Q ss_pred CeEEcccccccccCCCC------CcccccccCCCCC-CCCC-CCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHh
Q 005734 529 AAKVAEICFTTIALPKS------KVSDDIENSVLPP-LADP-ETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYL 599 (680)
Q Consensus 529 ~~ki~DFGla~~~~~~~------~~~~~~~~~~~~~-~~s~-~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~ 599 (680)
.+||+|||+++...... ......|+..... .++. ++||||||++++||+||+.||..... ...... ..
T Consensus 190 ~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---i~ 266 (348)
T 2pml_X 190 RVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN---IR 266 (348)
T ss_dssp CEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHH---HT
T ss_pred cEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH---Hh
Confidence 99999999998754321 1112223333333 3444 89999999999999999999976543 222222 22
Q ss_pred cCCCCccc----ccCccc----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 600 NEPRNFSC----MIDPSL----KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 600 ~~~~~~~~----~~d~~l----~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
........ ...+.. .........++.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 267 TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp SCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 21111110 000000 0011223468899999999999999999999986
No 188
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.5e-35 Score=314.11 Aligned_cols=238 Identities=16% Similarity=0.255 Sum_probs=181.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||++... +|+.||||++..... .+.+|++++.++ +|||||++++++.+++ ..++||
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~lv~ 95 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---------DPTEEIEILLRYGQHPNIITLKDVYDDGK--YVYVVT 95 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---------CCHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---------ChHHHHHHHHHhcCCCCcCeEEEEEEcCC--EEEEEE
Confidence 389999999999999975 688999999864321 245788888888 7999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC----CCeEEccccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD----YAAKVAEICFTTIA 541 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~----~~~ki~DFGla~~~ 541 (680)
||+++|+|.+++... ..+++.....++.+|+.||+|||+. +|+||||||+|||+.++ +.+||+|||+++..
T Consensus 96 E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 96 ELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999999999643 3699999999999999999999998 99999999999998433 35999999999876
Q ss_pred CCCCCcc---cccccCCCCC-----CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 542 LPKSKVS---DDIENSVLPP-----LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 542 ~~~~~~~---~~~~~~~~~~-----~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
....... ...+.+.+|+ .++.++|||||||++|||+||+.||.........+..............
T Consensus 171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~------ 244 (342)
T 2qr7_A 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSG------ 244 (342)
T ss_dssp BCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCS------
T ss_pred cCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCc------
Confidence 5332211 1112233322 2466799999999999999999999764333333443333322111110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
........++.+++.+|++.||++||++.|+++.
T Consensus 245 -~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 245 -GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp -TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0111223678899999999999999999999864
No 189
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.6e-36 Score=314.85 Aligned_cols=233 Identities=13% Similarity=0.209 Sum_probs=182.2
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhh---HHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDW---LKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+.||+|+||.||+|+. .+|+.||||++........ .......+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~~~lv 107 (335)
T 3dls_A 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG--FFQLV 107 (335)
T ss_dssp EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC--EEEEE
Confidence 8999999999999996 5788999999875432110 0012235778999999999999999999999877 67999
Q ss_pred EEecCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 465 FEYAPNG-TVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 465 ~ey~~~G-sL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|||+.+| +|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 ~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 182 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182 (335)
T ss_dssp EECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence 9999877 999998643 3699999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCcc-------cccccCCCCCC-CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSKVS-------DDIENSVLPPL-ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~~~-------~~~~~~~~~~~-~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
..... ...|+...... .++++||||||+++|||+||+.||...... .......
T Consensus 183 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------~~~~~~~---------- 243 (335)
T 3dls_A 183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------VEAAIHP---------- 243 (335)
T ss_dssp TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------TTTCCCC----------
T ss_pred CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------HhhccCC----------
Confidence 32211 11233222233 377899999999999999999999753210 0000000
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.....++.+++.+||+.||++|||++++++.
T Consensus 244 -~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 244 -PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01122578899999999999999999999874
No 190
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=8e-35 Score=303.21 Aligned_cols=242 Identities=16% Similarity=0.194 Sum_probs=184.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++... ++..||||++....... .......+.+|++++++++||||+++++++...+....++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRR-IPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVME 88 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHH-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEE
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccc-cchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEeh
Confidence 389999999999999974 78899999986543111 1224567999999999999999999999986443336799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++| |.+++.......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 89 ~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 164 (305)
T 2wtk_C 89 YCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA 164 (305)
T ss_dssp CCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS
T ss_pred hccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccCcccc
Confidence 99876 87887665566799999999999999999999998 999999999999999999999999999987642211
Q ss_pred c-----c-----cccccCCC--CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 547 V-----S-----DDIENSVL--PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 547 ~-----~-----~~~~~~~~--~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
. . ...|+... ....+.++||||||+++|||+||+.||.........+.+ .......
T Consensus 165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i---~~~~~~~--------- 232 (305)
T 2wtk_C 165 DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI---GKGSYAI--------- 232 (305)
T ss_dssp SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHCCCCC---------
T ss_pred ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHH---hcCCCCC---------
Confidence 1 0 11122211 122367899999999999999999999865432222222 2221111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+......+.+++.+||+.||++|||++|+++.
T Consensus 233 --~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 233 --PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11223678899999999999999999999975
No 191
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.3e-35 Score=310.23 Aligned_cols=249 Identities=15% Similarity=0.267 Sum_probs=184.2
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. +|+.||||++...... ....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 105 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD---KMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK--RWYLVFEF 105 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCCc---hHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC--EEEEEEec
Confidence 79999999999999985 5899999988654322 334567889999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 106 ~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 180 (331)
T 4aaa_A 106 VDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180 (331)
T ss_dssp CSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred CCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence 9999998886533 3699999999999999999999998 9999999999999999999999999999765432111
Q ss_pred c--------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC-----------CCccc
Q 005734 548 S--------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-----------RNFSC 607 (680)
Q Consensus 548 ~--------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 607 (680)
. ...|+.... ..++.++||||||+++|||+||+.||......+....+....... .....
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence 1 112232222 256889999999999999999999997654333222221111110 00000
Q ss_pred ccCcccCC------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 MIDPSLKS------FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 ~~d~~l~~------~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...+.+.. .......++.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11111110 01123467999999999999999999999986
No 192
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.1e-36 Score=314.39 Aligned_cols=249 Identities=14% Similarity=0.216 Sum_probs=186.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+.. +|+.||||++..... ......+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 81 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE----EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLVFEY 81 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC----------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--CEEEEEEC
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEecccc----cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--EEEEEecc
Confidence 78999999999999985 789999998864331 112224668999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
++ |+|.+++... ...+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 82 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 156 (324)
T ss_dssp CS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCccc
Confidence 97 6999998754 34699999999999999999999998 9999999999999999999999999999865422111
Q ss_pred --------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--cccccCc-----
Q 005734 548 --------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCMIDP----- 611 (680)
Q Consensus 548 --------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~----- 611 (680)
....|+.... ..++.++|||||||++|||+||+.||.+....+....+......+.. .......
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcc
Confidence 1122332222 45788999999999999999999999876555555544444333211 1111100
Q ss_pred ----ccC-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 612 ----SLK-----SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 612 ----~l~-----~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
... ........++.+++.+|++.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000 0011223578899999999999999999999873
No 193
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=302.63 Aligned_cols=236 Identities=18% Similarity=0.254 Sum_probs=182.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +|+.||||.+.... ...++.+|++++.+++||||+++++++...+ ..++|||
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 104 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT--DLWIVME 104 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS-------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH-------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEEee
Confidence 389999999999999985 58999999986533 1346889999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ...+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 105 ~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 105 YCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp CCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 99999999998632 34689999999999999999999998 999999999999999999999999999977643211
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+......++.++||||||+++|||+||+.||...........+... ..... ..+.
T Consensus 181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~---------~~~~ 249 (314)
T 3com_A 181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN--PPPTF---------RKPE 249 (314)
T ss_dssp CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--CCCCC---------SSGG
T ss_pred ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC--CCccc---------CCcc
Confidence 11 11233333446788999999999999999999999764422222111111 10000 0111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....+.+++.+||+.||++|||+.++++
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 22367899999999999999999999986
No 194
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.1e-35 Score=337.35 Aligned_cols=243 Identities=15% Similarity=0.252 Sum_probs=190.3
Q ss_pred ccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|... .+..||||+...... ....+.|.+|+.++++++|||||+++|++.++ ..++
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---~~~l 467 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS----DSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PVWI 467 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEE
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---ceEE
Confidence 378999999999999974 245788888754321 23456799999999999999999999998643 4689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 468 v~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 99999999999999744 34689999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 544 KSKVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 544 ~~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
..... ...|+......++.++|||||||++|||+| |+.||.+....+....+......
T Consensus 544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~------------ 611 (656)
T 2j0j_A 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------------ 611 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCC------------
T ss_pred CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC------------
Confidence 22111 112222223457888999999999999997 99999865544443333321111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+...+..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus 612 -~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 612 -PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 0112233678999999999999999999999999998864
No 195
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.3e-35 Score=306.80 Aligned_cols=246 Identities=17% Similarity=0.300 Sum_probs=170.7
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|.. .+++.||||++..... ....+++.+|++++++++||||+++++++...+ ..++|||
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 93 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC----QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD--ELWLVMK 93 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC--------------------CCCCCCCTTBCCEEEEEESSS--CEEEEEE
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhc----chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC--CcEEEeh
Confidence 38999999999999986 4788999998864432 223567889999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 467 YAPNGTVFEHLHI------KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 467 y~~~GsL~~~l~~------~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
|+++|+|.+++.. .....+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999863 1235699999999999999999999998 999999999999999999999999999977
Q ss_pred cCCCCCcc--------cccccCCCC------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcc
Q 005734 541 ALPKSKVS--------DDIENSVLP------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS 606 (680)
Q Consensus 541 ~~~~~~~~--------~~~~~~~~~------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 606 (680)
........ ...+.+..| ..++.++||||||+++|||+||+.||.............. .......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~--~~~~~~~ 248 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ--NDPPSLE 248 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHT--SSCCCTT
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhc--cCCCccc
Confidence 64321100 011122222 2468889999999999999999999976543333222111 1111111
Q ss_pred c-ccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 607 C-MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 607 ~-~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
. ..++. .......++.+++.+||+.||++||++.|+++
T Consensus 249 ~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 249 TGVQDKE---MLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp C-----C---CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccch---hhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 11111 11122357889999999999999999999986
No 196
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.9e-35 Score=304.38 Aligned_cols=238 Identities=15% Similarity=0.200 Sum_probs=182.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|..||+|++..... .....|.+|++++++++||||+++++++...+ ..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 96 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSE-----EELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWIMIE 96 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC---------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CEEEEEE
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH-----HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC--eEEEEEE
Confidence 378999999999999985 688999998865432 22457899999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC---
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP--- 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~--- 543 (680)
|+++|+|.+++... ...+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 97 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (302)
T 2j7t_A 97 FCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ 172 (302)
T ss_dssp CCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH
T ss_pred eCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccccc
Confidence 99999999998643 24689999999999999999999998 999999999999999999999999998754321
Q ss_pred -C----CCcccccccCC-----CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 544 -K----SKVSDDIENSV-----LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 544 -~----~~~~~~~~~~~-----~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
. .......|+.. ....++.++||||||+++|||+||+.||........ .......... ...
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~--~~~---- 243 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV---LLKIAKSDPP--TLL---- 243 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHHHSCCC--CCS----
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH---HHHHhccCCc--ccC----
Confidence 0 11111223322 244568899999999999999999999976443222 2222211110 000
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.....++.+++.+||+.||++|||+.++++
T Consensus 244 --~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 244 --TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11222367899999999999999999999875
No 197
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.3e-35 Score=313.85 Aligned_cols=250 Identities=12% Similarity=0.181 Sum_probs=186.7
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||++... +|..||+|++..... ....+.+.+|++++++++||||+++++++.+++ ..++||||
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 112 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEH 112 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCCC----HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--EEEEEECC
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEeccccC----HHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--EEEEEEEC
Confidence 89999999999999985 789999999875432 334567999999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC--
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-- 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~-- 545 (680)
+++|+|.+++.... .+++..+.+|+.+++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++......
T Consensus 113 ~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188 (360)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccccccc
Confidence 99999999996543 5899999999999999999999732 79999999999999999999999999987543111
Q ss_pred ----CcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC------------CCc----
Q 005734 546 ----KVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP------------RNF---- 605 (680)
Q Consensus 546 ----~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~------------~~~---- 605 (680)
......|+......++.++||||||+++|||+||+.||................... ...
T Consensus 189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (360)
T 3eqc_A 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG 268 (360)
T ss_dssp --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------------
T ss_pred CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccc
Confidence 111222343444567889999999999999999999997544222211110000000 000
Q ss_pred ---------ccccC----cccCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 606 ---------SCMID----PSLKS-FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 606 ---------~~~~d----~~l~~-~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+ ..... .......++.+++.+||+.||++|||++|+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000 00000 011123578999999999999999999999864
No 198
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1e-34 Score=317.29 Aligned_cols=248 Identities=15% Similarity=0.183 Sum_probs=186.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC------CCCcccceeeEEecCCCCc
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI------NHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l------~H~niv~l~g~~~~~~~~~ 460 (680)
.+.||+|+||+||+|... +++.||||++... ....+.+.+|++++..+ +|+||+++++++...+ .
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--~ 173 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE------KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN--H 173 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--E
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCc------cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--e
Confidence 389999999999999875 6889999998643 23345677888888777 5779999999999877 7
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC--eEEcccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA--AKVAEICFT 538 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--~ki~DFGla 538 (680)
.++||||+. |+|.+++.......+++..+.+|+.||+.||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 899999995 6999999876666799999999999999999999998 9999999999999999887 999999999
Q ss_pred cccCCCCCccc-----ccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--------c
Q 005734 539 TIALPKSKVSD-----DIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--------F 605 (680)
Q Consensus 539 ~~~~~~~~~~~-----~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--------~ 605 (680)
+.......... ..|+......++.++|||||||++|||+||+.||.+....+....+......+.. .
T Consensus 250 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~ 329 (429)
T 3kvw_A 250 CYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRA 329 (429)
T ss_dssp EETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTH
T ss_pred eecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhh
Confidence 77553322221 2233333446789999999999999999999999865544333333222211100 0
Q ss_pred ccccC---------------cc------------------cCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 606 SCMID---------------PS------------------LKS----FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 606 ~~~~d---------------~~------------------l~~----~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...++ .. ... ........+.+|+.+||+.||++|||++|+++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~ 408 (429)
T 3kvw_A 330 KNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR 408 (429)
T ss_dssp HHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence 00000 00 000 00111357889999999999999999999986
No 199
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=8.2e-35 Score=317.22 Aligned_cols=242 Identities=14% Similarity=0.248 Sum_probs=179.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchh---hHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKD---WLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||+||+|... +++.||||++....... ........+.+|++++++++|||||++++++... ..++
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---~~~l 216 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE---DYYI 216 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS---EEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC---ceEE
Confidence 389999999999999874 68999999987543211 0112233588999999999999999999998654 4689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CCeEEcccccccc
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD---YAAKVAEICFTTI 540 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~ki~DFGla~~ 540 (680)
||||+++|+|.+++... ..+++..+..|+.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++.
T Consensus 217 v~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~ 291 (419)
T 3i6u_A 217 VLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291 (419)
T ss_dssp EEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred EEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeeccccee
Confidence 99999999999998643 4699999999999999999999998 99999999999999654 4599999999987
Q ss_pred cCCCCCcc--cccccCCCCC--------CCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCccccc
Q 005734 541 ALPKSKVS--DDIENSVLPP--------LADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMI 609 (680)
Q Consensus 541 ~~~~~~~~--~~~~~~~~~~--------~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 609 (680)
........ ...+.+.+|+ .++.++|||||||++|||+||+.||..... ..+.+.+..... .. .
T Consensus 292 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~---~~---~ 365 (419)
T 3i6u_A 292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY---NF---I 365 (419)
T ss_dssp CC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCC---CC---C
T ss_pred cCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCC---CC---C
Confidence 65332111 1122333333 346689999999999999999999975432 233333222110 00 0
Q ss_pred CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+... ....++.+++.+|++.||++|||++|+++
T Consensus 366 ~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 366 PEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 00001 12367899999999999999999999986
No 200
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.5e-35 Score=314.34 Aligned_cols=250 Identities=12% Similarity=0.173 Sum_probs=171.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|++++++++||||+++++++..... ...++
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~l 111 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS---IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 111 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTSS---HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEE
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccccC---HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEE
Confidence 7899999999999986 57899999998643211 2345678899999999999999999999975421 14699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 112 v~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 112 VTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp EEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred Eeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 99999 7899998864 4699999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcc-----cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--cccccC-----
Q 005734 544 KSKVS-----DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCMID----- 610 (680)
Q Consensus 544 ~~~~~-----~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~d----- 610 (680)
..... ...|+.... ..++.++||||+||+++||+||+.||.+....+....+...+..+.. ...+-.
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~ 264 (367)
T 2fst_X 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264 (367)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHH
T ss_pred cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHH
Confidence 22111 112332222 46788999999999999999999999876544444433333322110 000000
Q ss_pred -----cccCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 611 -----PSLKS-----FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 611 -----~~l~~-----~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.... ........+.+|+.+|++.||++|||++|+++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 265 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00000 001123578899999999999999999999874
No 201
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.6e-35 Score=323.45 Aligned_cols=247 Identities=11% Similarity=0.150 Sum_probs=186.0
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc-ccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN-FVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+|+. .+++.||||++..... ..++..|++++..++|++ +..+..++.+.+ ..+|||
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-------~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~--~~~lvm 82 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------HPQLLYESKIYRILQGGTGIPNVRWFGVEGD--YNVLVM 82 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-------SCCHHHHHHHHHHTTTSTTCCCEEEEEEETT--EEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-------cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCC--EEEEEE
Confidence 38999999999999996 5789999998765432 234789999999998754 555555555555 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccccC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~~~ 542 (680)
||+ +|+|.+++... ...+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 83 e~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred ECC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 999 99999999743 34699999999999999999999998 99999999999999 688999999999998765
Q ss_pred CCCCcc---------------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccc
Q 005734 543 PKSKVS---------------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSC 607 (680)
Q Consensus 543 ~~~~~~---------------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (680)
...... ...|+......++.++|||||||++|||+||+.||.+.......+.+....... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--~~~ 235 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK--VAT 235 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH--HHS
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc--ccc
Confidence 432211 111222334456788999999999999999999998654333333222221110 000
Q ss_pred ccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 608 MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 608 ~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+. ......+.++.+++..||+.+|++||++++|++.|+++..
T Consensus 236 ~~~----~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 236 SIE----ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp CHH----HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred cHH----HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 000 0001123688999999999999999999999999999864
No 202
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.4e-34 Score=298.52 Aligned_cols=242 Identities=19% Similarity=0.305 Sum_probs=187.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccch----hhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSK----DWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~----~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 462 (680)
+.||+|+||.||+|... +|+.||||++...... .......+.+.+|++++++++ ||||+++++++...+ ..+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~--~~~ 100 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT--FFF 100 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEE
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC--eEE
Confidence 89999999999999985 6899999998754311 112334567899999999996 999999999998876 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 175 (298)
T 1phk_A 101 LVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175 (298)
T ss_dssp EEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence 999999999999999653 3689999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCcc-------cccccCC------CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccccc
Q 005734 543 PKSKVS-------DDIENSV------LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMI 609 (680)
Q Consensus 543 ~~~~~~-------~~~~~~~------~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (680)
...... ...|+.. ....++.++||||||++++||+||+.||...........+.. ......
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~--- 249 (298)
T 1phk_A 176 PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS---GNYQFG--- 249 (298)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCCCCC---
T ss_pred CCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhc---CCcccC---
Confidence 322111 1112211 123567899999999999999999999976543333222222 111110
Q ss_pred CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.. .....++.+++.+|++.||++|||+.|+++
T Consensus 250 ~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 250 SPEW----DDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TTTG----GGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cccc----cccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0111 123367899999999999999999999975
No 203
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=8.2e-35 Score=302.61 Aligned_cols=221 Identities=16% Similarity=0.264 Sum_probs=174.5
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHH-HcCCCCcccceeeEEec----CCCCceE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTL-SRINHKNFVNLIGYCED----DEPFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~----~~~~~~~ 462 (680)
++||+|+||.||++.. .+|+.||||++... ..+.+|++++ +..+||||+++++++.. .. ..+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~--~~~ 91 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK--CLL 91 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE--EEE
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc----------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc--eEE
Confidence 6799999999999997 47899999998532 2466888888 55689999999999875 33 579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEccccccc
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTT 539 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~ 539 (680)
+||||+++|+|.+++.......+++..+..++.+++.||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 999999999999999876656799999999999999999999998 9999999999999998 7899999999987
Q ss_pred ccCCCCCcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC--
Q 005734 540 IALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK-- 617 (680)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~-- 617 (680)
.... ..++.++|||||||++|||+||+.||.......... . ....+.......+
T Consensus 169 ~~~~--------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-------~---~~~~~~~~~~~~~~~ 224 (299)
T 3m2w_A 169 ETTG--------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-------G---MKTRIRMGQYEFPNP 224 (299)
T ss_dssp ECTT--------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-------C---SCCSSCTTCCSSCHH
T ss_pred cccc--------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-------H---HHHHHhhccccCCch
Confidence 6532 345778999999999999999999997543211100 0 0000000000111
Q ss_pred --HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 --QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 --~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+||+.||++|||+.|+++.
T Consensus 225 ~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 225 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1234678999999999999999999999974
No 204
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=9.3e-35 Score=305.69 Aligned_cols=252 Identities=14% Similarity=0.203 Sum_probs=185.8
Q ss_pred cccCCCCCCeEEEEEe--CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC---CCCcccceeeEEecC---CCCc
Q 005734 389 NIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI---NHKNFVNLIGYCEDD---EPFN 460 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~--~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~---~~~~ 460 (680)
+.||+|+||.||+|+. .+|+.||||++....... .....+.+|+++++++ +||||++++++|... ....
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 93 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE---GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 93 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT---SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEE
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCcccc---cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCce
Confidence 8999999999999997 468899999987544221 1122456677776665 899999999998721 1125
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.++||||++ |+|.+++.......+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 94 LTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred EEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 799999997 6999999766556799999999999999999999998 999999999999999999999999999976
Q ss_pred cCCCCC-------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--ccc----
Q 005734 541 ALPKSK-------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSC---- 607 (680)
Q Consensus 541 ~~~~~~-------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~---- 607 (680)
...... .....|+......++.++||||||+++|||+||+.||.+.........+......+.. ...
T Consensus 170 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 249 (326)
T 1blx_A 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249 (326)
T ss_dssp CCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSS
T ss_pred ccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcccccc
Confidence 542211 1112233334456788999999999999999999999875544443333332221110 000
Q ss_pred ---cc----CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 ---MI----DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 ---~~----d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+ ...+..........+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 00011122233467889999999999999999999985
No 205
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6.6e-35 Score=307.45 Aligned_cols=243 Identities=11% Similarity=0.162 Sum_probs=180.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||+||+|.. .+++.||||++.... .+.+.+|++++++++ ||||+++++++.+......++|||
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVK--------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCC--------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEecccc--------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 8999999999999986 578999999986432 346889999999997 999999999998744336799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-AAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~ki~DFGla~~~~~~~ 545 (680)
|+++++|.+++. .+++..+..++.+++.||+|||+. +|+||||||+|||++.++ .+||+|||+++......
T Consensus 114 ~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 114 HVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp CCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred ccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 999999999984 388999999999999999999998 999999999999999776 89999999998765332
Q ss_pred Ccc-------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhc----------CCCCcc
Q 005734 546 KVS-------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLN----------EPRNFS 606 (680)
Q Consensus 546 ~~~-------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~----------~~~~~~ 606 (680)
... ...|+.... ..++.++|||||||+++||+||+.||..... .+....+..... ......
T Consensus 186 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 265 (330)
T 3nsz_A 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 265 (330)
T ss_dssp CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccc
Confidence 211 112222222 4678899999999999999999999953321 111111111000 000000
Q ss_pred ----cc--------cCcccC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 607 ----CM--------IDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 607 ----~~--------~d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.. ...... ........++.+++.+|++.||++|||++|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 000000 011123468899999999999999999999986
No 206
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-34 Score=318.78 Aligned_cols=252 Identities=13% Similarity=0.124 Sum_probs=172.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC---CceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP---FNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~l 463 (680)
.+.||+|+||+||+|... +|+.||||++...... ....+.+.+|+++|++++|||||++++++..... ...++
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 134 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFED---LIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV 134 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSS---HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcC---HHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEE
Confidence 389999999999999864 7899999988643221 3345679999999999999999999999964321 25799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+ +|+|.+++... ..+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 135 v~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 135 VLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 99998 57999998643 4699999999999999999999998 999999999999999999999999999987642
Q ss_pred CCCc-----------------------------------ccccccCC-CCCCCCCCCCeeehhHHHHHHHh---------
Q 005734 544 KSKV-----------------------------------SDDIENSV-LPPLADPETNIYSFGILMLEIIS--------- 578 (680)
Q Consensus 544 ~~~~-----------------------------------~~~~~~~~-~~~~~s~~sDVySfGvvllEllt--------- 578 (680)
.... ....||.. ....++.++|||||||++|||+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 1100 01122321 23457889999999999999999
Q ss_pred --CCCCCCcccc--------------------ccHHHHHHHHhcCCCC-----------------cccccCcccCCCCHH
Q 005734 579 --GKLPYCEEKE--------------------LSIEKWAADYLNEPRN-----------------FSCMIDPSLKSFKQN 619 (680)
Q Consensus 579 --G~~p~~~~~~--------------------~~~~~~~~~~~~~~~~-----------------~~~~~d~~l~~~~~~ 619 (680)
|+.+|.+... .+....+...+..+.. +.......+......
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 5555543210 0111111111111100 000000001111112
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+|+.+||+.||++|||++|+++.
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 24678899999999999999999999975
No 207
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.4e-34 Score=298.92 Aligned_cols=240 Identities=13% Similarity=0.164 Sum_probs=171.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|.. .+|+.||||++...... ....+.+.++...++.++||||+++++++.+++ ..++||||
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~e~ 87 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS---QEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWICMEL 87 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CH---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--SEEEEEEC
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc---HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC--CEEEEEeh
Confidence 8999999999999997 57899999998654321 223344555666688889999999999999877 67999999
Q ss_pred cCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 468 APNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 468 ~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
++ |+|.+++.. .....+++..+.+|+.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T 3fme_A 88 MD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164 (290)
T ss_dssp CS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred hc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence 97 588888753 23457999999999999999999999843 89999999999999999999999999998764322
Q ss_pred Ccc-------cccccC----CCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 546 KVS-------DDIENS----VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 546 ~~~-------~~~~~~----~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
... ...|+. .....++.++||||||+++|||+||+.||..... .. ............. ..
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~-~~~~~~~~~~~~~--~~----- 235 (290)
T 3fme_A 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-PF-QQLKQVVEEPSPQ--LP----- 235 (290)
T ss_dssp -----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-HH-HHHHHHHHSCCCC--CC-----
T ss_pred cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-hH-HHHHHHhccCCCC--cc-----
Confidence 111 112332 1234567889999999999999999999975321 11 1122222221100 00
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
......++.+++.+|++.||++|||+.|+++
T Consensus 236 --~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 --ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp --TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1112367899999999999999999999987
No 208
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7e-35 Score=314.17 Aligned_cols=252 Identities=15% Similarity=0.233 Sum_probs=183.2
Q ss_pred hhhhc--cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC---
Q 005734 384 CEDFS--NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE--- 457 (680)
Q Consensus 384 ~~~~~--~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--- 457 (680)
...|. +.||+|+||+||+|.. .+|+.||||++.... ....+|++++++++|||||++++++....
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---------RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---------TSCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---------chHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 34444 8999999999999986 578999999886432 12347999999999999999999985432
Q ss_pred ---------------------------------CCceEEEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHH
Q 005734 458 ---------------------------------PFNRMMVFEYAPNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQ 502 (680)
Q Consensus 458 ---------------------------------~~~~~lV~ey~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~ 502 (680)
....++||||++ |+|.+.+.. .....+++..+..++.|+++||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 113689999997 588888753 23457999999999999999999
Q ss_pred HHhcCCCCCeeecCCCCCCeeec-CCCCeEEcccccccccCCCCCcc-------cccccCCCC-CCCCCCCCeeehhHHH
Q 005734 503 YMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAEICFTTIALPKSKVS-------DDIENSVLP-PLADPETNIYSFGILM 573 (680)
Q Consensus 503 yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~DFGla~~~~~~~~~~-------~~~~~~~~~-~~~s~~sDVySfGvvl 573 (680)
|||+. +|+||||||+|||++ +++.+||+|||+++......... ...|+.... ..++.++||||+||++
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 99998 999999999999998 68899999999998764332211 112232222 3478899999999999
Q ss_pred HHHHhCCCCCCccccccHHHHHHHHhcCCC---------CcccccCcccC------CCCHHHHHHHHHHHHHccccCCCC
Q 005734 574 LEIISGKLPYCEEKELSIEKWAADYLNEPR---------NFSCMIDPSLK------SFKQNELEAICEVIKECIKTDLRQ 638 (680)
Q Consensus 574 lElltG~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~~l~------~~~~~~~~~~~~l~~~C~~~~P~~ 638 (680)
|||++|+.||.+....+....+......+. ......-+.+. ..+.....++.+++.+|++.||++
T Consensus 233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 999999999987554333333222222110 00000001111 012233467899999999999999
Q ss_pred CCCHHHHHHH
Q 005734 639 RPTMNDIIVQ 648 (680)
Q Consensus 639 RPtm~ev~~~ 648 (680)
|||+.|+++.
T Consensus 313 R~t~~e~l~h 322 (383)
T 3eb0_A 313 RINPYEAMAH 322 (383)
T ss_dssp SCCHHHHHTS
T ss_pred CCCHHHHhcC
Confidence 9999999853
No 209
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2e-34 Score=307.06 Aligned_cols=250 Identities=12% Similarity=0.174 Sum_probs=184.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC----ceE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF----NRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~----~~~ 462 (680)
.+.||+|+||.||+|... +|+.||||++...... ....+.+.+|+.++++++||||+++++++...... ..+
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 105 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS---EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSS---HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccc---hHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence 378999999999999974 7899999998653321 33456789999999999999999999999876421 248
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||++ |+|.+++. ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 106 lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 106 LVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp EEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 9999997 68988874 2489999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCcc-----cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-C-----------
Q 005734 543 PKSKVS-----DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-N----------- 604 (680)
Q Consensus 543 ~~~~~~-----~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~----------- 604 (680)
...... ...|+.... ..++.++||||||++++||+||+.||.+....+....+......+. .
T Consensus 178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 322111 112332222 4578899999999999999999999986543333222222111100 0
Q ss_pred -----cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 605 -----FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 605 -----~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.....+.+.........++.+++.+|++.||++|||++++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000111112222345788999999999999999999999864
No 210
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1e-34 Score=311.54 Aligned_cols=250 Identities=12% Similarity=0.186 Sum_probs=182.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC----ceE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF----NRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~----~~~ 462 (680)
.+.||+|+||.||+|... +|+.||||++...... ....+.+.+|++++++++||||+++++++...+.. ..+
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 123 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS---EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSS---HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccc---hhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEE
Confidence 378999999999999974 7899999998654322 33456789999999999999999999999876521 238
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+. |+|.+++. ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 124 lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 124 LVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp EEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 9999997 68988874 2489999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCccc-----ccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-Cccccc------
Q 005734 543 PKSKVSD-----DIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-NFSCMI------ 609 (680)
Q Consensus 543 ~~~~~~~-----~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~------ 609 (680)
....... ..|+.... ..++.++|||||||+++||+||+.||.+....+....+......+. .....+
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 3322111 12332222 4678899999999999999999999986543333333222221110 000000
Q ss_pred ----------CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 610 ----------DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 610 ----------d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...+.........++.+++.+|++.||++|||++|+++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000111224678999999999999999999999875
No 211
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.2e-34 Score=308.92 Aligned_cols=249 Identities=12% Similarity=0.194 Sum_probs=181.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||.||+|... +|+.||||++...... ....+.+.+|++++++++||||+++++++...+. ...++
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~l 107 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN---QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI 107 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSS---HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEE
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEeccccCC---hHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEE
Confidence 88999999999999864 6889999998754321 3345678899999999999999999999976542 14699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||++ |+|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 v~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 108 VMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp EEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred EEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 999996 58888885 2489999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC--------------
Q 005734 544 KSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-------------- 602 (680)
Q Consensus 544 ~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-------------- 602 (680)
.... ....|+......++.++|||||||++|||+||+.||.+.........+......+
T Consensus 180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 259 (371)
T 2xrw_A 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 259 (371)
T ss_dssp ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHH
T ss_pred ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 2111 1122343344567899999999999999999999997654332222221111110
Q ss_pred -----CCc-----ccccCccc-CC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 603 -----RNF-----SCMIDPSL-KS---FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 603 -----~~~-----~~~~d~~l-~~---~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
... ...+.... .. .......++.+++.+|++.||++|||++|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 260 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000 00000000 00 012235689999999999999999999999875
No 212
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=304.70 Aligned_cols=239 Identities=16% Similarity=0.266 Sum_probs=182.3
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCC----CCceE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDE----PFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~----~~~~~ 462 (680)
+.||+|+||.||+|+. .+|+.||||++..... ....+.+|++++.++ +||||+++++++.... ....+
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~ 103 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCcc------cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence 8999999999999997 4789999999865432 235688999999999 7999999999997632 12679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++.......+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 999999999999999765556799999999999999999999998 99999999999999999999999999988754
Q ss_pred CCCCc--------ccccccCCC-----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccccc
Q 005734 543 PKSKV--------SDDIENSVL-----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMI 609 (680)
Q Consensus 543 ~~~~~--------~~~~~~~~~-----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (680)
..... ....|+... ...++.++||||||+++|||+||+.||...........+ ..... ....
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~--~~~~ 255 (326)
T 2x7f_A 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI---PRNPA--PRLK 255 (326)
T ss_dssp ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSCC--CCCS
T ss_pred cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh---hcCcc--ccCC
Confidence 22111 111233222 345788999999999999999999999765432222211 11111 0011
Q ss_pred CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 610 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. ......+.+++.+||+.||++||+++++++.
T Consensus 256 ~-------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 256 S-------KKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp C-------SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred c-------cccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1 1122578899999999999999999999873
No 213
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-35 Score=313.16 Aligned_cols=242 Identities=14% Similarity=0.194 Sum_probs=184.1
Q ss_pred ccccCCCCCCeEEEEEe----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||+++. .+|+.||||++....... .......+.+|++++.++ +||||+++++++...+ ..+
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~ 135 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ-KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET--KLH 135 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE-EESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--EEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhh-hhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc--eEE
Confidence 38999999999999997 478999999986432110 011233577899999999 6999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 136 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 136 LILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 999999999999999754 3689999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCc---------ccccccCCC--CCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCcccccC
Q 005734 543 PKSKV---------SDDIENSVL--PPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 543 ~~~~~---------~~~~~~~~~--~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d 610 (680)
..... ....|+... ...++.++|||||||++|||+||+.||..... .................
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----- 285 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY----- 285 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCC-----
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCC-----
Confidence 22111 011122222 13457889999999999999999999975432 23333333333221111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
+......+.+++.+||+.||++|| +++|+++.
T Consensus 286 ------~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 286 ------PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ------CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ------CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 122235788999999999999999 89998864
No 214
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.5e-34 Score=321.36 Aligned_cols=242 Identities=19% Similarity=0.285 Sum_probs=189.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++....... ......+.+|++++++++|||||++++++.+.+ ..++|+|
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e 106 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFYLVGE 106 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB--SSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc--chHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEe
Confidence 489999999999999975 78999999986543221 123457899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 107 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 107 VYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred cCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999999998644 3699999999999999999999998 99999999999999 5678999999999987654
Q ss_pred CCCcc--cccccCCCC----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 544 KSKVS--DDIENSVLP----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 544 ~~~~~--~~~~~~~~~----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
..... ...+.+.+| +.+++++||||+||++|||+||+.||.+.....+...+.. ...... .+.+
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~~~~~---~~~~---- 251 (484)
T 3nyv_A 182 SKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK---GKYTFE---LPQW---- 251 (484)
T ss_dssp CCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CCCCCC---SGGG----
T ss_pred ccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc---CCCCCC---Cccc----
Confidence 32211 111222222 3578899999999999999999999987654444433332 111111 1111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+|++.+|++|||+.|+++.
T Consensus 252 ~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 252 KKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 1223678899999999999999999999864
No 215
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.2e-34 Score=317.75 Aligned_cols=241 Identities=17% Similarity=0.286 Sum_probs=182.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+.. ++..||||++...... ......+.+|++++++++|||||+++++|.+.+ ..++|||
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e 116 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS---TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR--NYYLVME 116 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC--------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC---chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEe
Confidence 489999999999999975 7889999998754321 112456889999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 117 ~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 117 CYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 99999999988644 3689999999999999999999998 9999999999999976 45599999999987653
Q ss_pred CCCccc--ccccCCC----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 544 KSKVSD--DIENSVL----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 544 ~~~~~~--~~~~~~~----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
...... ..+.+.+ ...+++++||||+||++|||+||+.||.+.....+...+.. ..... ..+.+..
T Consensus 192 ~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~~~~---~~~~~~~-- 263 (494)
T 3lij_A 192 QKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEK---GKYTF---DSPEWKN-- 263 (494)
T ss_dssp TBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCCCC---CSGGGTT--
T ss_pred CccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCCCC---Cchhccc--
Confidence 322111 1122222 24578899999999999999999999987554443333322 11111 1111122
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+++.+||+.+|++|||+.|+++.
T Consensus 264 --~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 264 --VSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp --SCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred --CCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 22578899999999999999999999864
No 216
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.9e-34 Score=306.97 Aligned_cols=252 Identities=15% Similarity=0.191 Sum_probs=186.0
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC------CCce
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE------PFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~~~ 461 (680)
+.||+|+||.||+|+. .+|+.||||++....... .....+.+|++++++++||||+++++++.... ....
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 99 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE---GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSI 99 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS---SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEE
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEecccccc---cchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceE
Confidence 8999999999999998 578999999886544221 22346789999999999999999999998643 1157
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++||||+++ +|.+.+.... ..+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 100 ~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 174 (351)
T 3mi9_A 100 YLVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 174 (351)
T ss_dssp EEEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence 899999974 8888776433 4699999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCcc------------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-C-cc
Q 005734 542 LPKSKVS------------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-N-FS 606 (680)
Q Consensus 542 ~~~~~~~------------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~-~~ 606 (680)
....... ...|+.... ..++.++|||||||+++||+||+.||.+.........+........ . ..
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 254 (351)
T 3mi9_A 175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 254 (351)
T ss_dssp CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence 4211110 112222222 3468899999999999999999999987654444444444332211 1 11
Q ss_pred cccCcc----cC---C---CCHHH------HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 607 CMIDPS----LK---S---FKQNE------LEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 607 ~~~d~~----l~---~---~~~~~------~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...... +. . ...+. ...+.+++.+|++.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 255 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000 00 0 00011 2458899999999999999999999874
No 217
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.6e-34 Score=318.41 Aligned_cols=240 Identities=19% Similarity=0.280 Sum_probs=186.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+.. +|+.||||++...... ......+.+|++++++++|||||++++++.+.. ..++|||
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e 101 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK---NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGE 101 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB---CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc---chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC--EEEEEEE
Confidence 489999999999999975 7899999998643211 122457899999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT---DDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld---~~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+.+... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++ .++.+||+|||+++....
T Consensus 102 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 102 LYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 99999999988644 3689999999999999999999998 999999999999995 456799999999987653
Q ss_pred CCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 544 KSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 544 ~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
..... ...|+... +.+++++||||+||++|||+||+.||.+.....+...+.. ...... .+.+.
T Consensus 177 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~~~~~---~~~~~-- 247 (486)
T 3mwu_A 177 NTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET---GKYAFD---LPQWR-- 247 (486)
T ss_dssp C----CCTTGGGGCCGGGGG-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCCCSC---SGGGG--
T ss_pred CCccCCCcCCCCCCCHHHhC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCCCCC---CcccC--
Confidence 32111 11233322 3468889999999999999999999987554443333322 111110 01111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+||+.+|++|||+.++++.
T Consensus 248 --~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 248 --TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp --GSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred --CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 223678899999999999999999999975
No 218
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2e-35 Score=317.01 Aligned_cols=246 Identities=8% Similarity=0.020 Sum_probs=167.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHH---HHHHcCCCCccccee-------eEEecC
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQV---DTLSRINHKNFVNLI-------GYCEDD 456 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~---~~l~~l~H~niv~l~-------g~~~~~ 456 (680)
.+.||+|+||.||+|+.. +|+.||||++....... ......+.+|+ +.|++ +||||++++ +++...
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENS--RSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTH--HHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEET
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEeccccc--ccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecC
Confidence 389999999999999975 78999999997654322 33455677884 55555 799988754 344322
Q ss_pred CC---------------CceEEEEEecCCCChhhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCeeec
Q 005734 457 EP---------------FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR------MRIIMGTAYCLQYMHHELNPPVAHS 515 (680)
Q Consensus 457 ~~---------------~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~r------l~ia~~ia~gL~yLH~~~~~~ivHr 515 (680)
+. ...++|||||+ |+|.+++.... ..+++..+ +.++.|+++||+|||+. +|+||
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHr 218 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHG 218 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccC
Confidence 21 13699999998 89999997532 23466677 88999999999999998 99999
Q ss_pred CCCCCCeeecCCCCeEEcccccccccCCCCCcc-----cccccCCCC--CCCCCCCCeeehhHHHHHHHhCCCCCCcccc
Q 005734 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVLP--PLADPETNIYSFGILMLEIISGKLPYCEEKE 588 (680)
Q Consensus 516 DlKp~NILld~~~~~ki~DFGla~~~~~~~~~~-----~~~~~~~~~--~~~s~~sDVySfGvvllElltG~~p~~~~~~ 588 (680)
||||+|||++.++.+||+|||+++......... ...|+.... ..++.++|||||||++|||+||+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999998765332111 122333333 4568899999999999999999999976532
Q ss_pred ccHHHHHHHHhcCCCCcccccCcccC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 589 LSIEKWAADYLNEPRNFSCMIDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....+ .. ............ ........++.+++.+||+.||++|||+.++++
T Consensus 299 ~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKGSW-----KR-PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTTCC-----CB-CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccch-----hh-hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 110000 00 000000000000 011233468899999999999999999999975
No 219
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.7e-34 Score=304.21 Aligned_cols=240 Identities=13% Similarity=0.166 Sum_probs=181.0
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHH-HHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDT-LSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||+|+. .+|+.||||++...... ....++..|..+ ++.++||||+++++++.+.+ ..++|||
T Consensus 57 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~e 130 (340)
T 3an0_A 57 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS----QEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWICME 130 (340)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC----HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS--CEEEEEC
T ss_pred eEecccCCEEEEEEEEcCCCCEEEEEEeccccCc----HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC--cEEEEHH
Confidence 7899999999999997 57899999998654322 223455566655 77889999999999999877 6799999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|+++ +|.+++... ....+++..+..|+.|++.||+|||+.+ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 131 ~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 207 (340)
T 3an0_A 131 LMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS 207 (340)
T ss_dssp CCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH
T ss_pred HhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecccc
Confidence 9975 999988632 3457999999999999999999999742 8999999999999999999999999999876432
Q ss_pred C-------CcccccccCC----CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 545 S-------KVSDDIENSV----LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 545 ~-------~~~~~~~~~~----~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
. ......|+.. ....++.++|||||||++|||+||+.||..... ....+......... ...
T Consensus 208 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~--~~~~~~~~~~~~~~--~~~---- 279 (340)
T 3an0_A 208 VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT--PFQQLKQVVEEPSP--QLP---- 279 (340)
T ss_dssp HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC--HHHHHHHHHHSCCC--CCC----
T ss_pred cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc--hHHHHHHHhcCCCC--CCC----
Confidence 1 1112223331 223568899999999999999999999975321 11122222222110 000
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
......++.+++.+||+.||++||++.|+++.
T Consensus 280 ---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 280 ---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11223678999999999999999999999873
No 220
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3e-34 Score=330.18 Aligned_cols=236 Identities=12% Similarity=0.122 Sum_probs=186.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||+|+.. +++.||||++...... .......+..|.+++..+ +||||+++++++.+.+ ..++|||
T Consensus 347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~--~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--~~~lV~E 422 (674)
T 3pfq_A 347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI--QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFVME 422 (674)
T ss_dssp EESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHH--HTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS--EEEEEEE
T ss_pred EEEccCCCEEEEEEEECCCCcEEEEEEEeccccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC--EEEEEEe
Confidence 89999999999999975 6888999998743211 122345688899999988 7999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..|+.+|+.||+|||+. +|+||||||+|||+|.++.+||+|||+++.......
T Consensus 423 ~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 423 YVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred CcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 99999999999754 3699999999999999999999998 999999999999999999999999999986432211
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...||......++.++|||||||++|||+||+.||.+.....+ ..........+ +.
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~---~~~i~~~~~~~-----------p~ 563 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL---FQSIMEHNVAY-----------PK 563 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHSSCCCC-----------CT
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH---HHHHHhCCCCC-----------Cc
Confidence 11 1123333445678899999999999999999999987543333 33333322111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTM-----NDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm-----~ev~~ 647 (680)
....++.+|+.+|++.||++||++ +||.+
T Consensus 564 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 564 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 223678999999999999999997 56653
No 221
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.3e-34 Score=302.67 Aligned_cols=248 Identities=13% Similarity=0.179 Sum_probs=188.8
Q ss_pred ccccCCCCCCeEEEEEe--CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc------ccceeeEEecCCCC
Q 005734 388 SNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN------FVNLIGYCEDDEPF 459 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~--~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~~~ 459 (680)
.+.||+|+||.||+|.. .+|+.||||++... ......+.+|++++.+++|+| ++++++++...+
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~-- 90 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV------DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG-- 90 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSS------HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT--
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecC------CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC--
Confidence 48999999999999986 36889999998532 233456889999999887654 999999998877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-------------
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD------------- 526 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~------------- 526 (680)
..++||||+ +++|.+++.......+++..+.+++.|+++||+|||+. +|+||||||+|||++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccc
Confidence 789999999 89999999866656799999999999999999999998 9999999999999987
Q ss_pred ------CCCeEEcccccccccCCCCCcc-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHH
Q 005734 527 ------DYAAKVAEICFTTIALPKSKVS-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA 595 (680)
Q Consensus 527 ------~~~~ki~DFGla~~~~~~~~~~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~ 595 (680)
++.+||+|||+++......... ...|+......++.++||||||+++|||+||+.||......+....+
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 246 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHH
T ss_pred ccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 6789999999998765332221 12233334456789999999999999999999999765433333333
Q ss_pred HHHhcCCCC-c------cccc---------------------C--cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 005734 596 ADYLNEPRN-F------SCMI---------------------D--PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645 (680)
Q Consensus 596 ~~~~~~~~~-~------~~~~---------------------d--~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev 645 (680)
......... . .... . ............++.+++.+||+.||++|||++|+
T Consensus 247 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 326 (339)
T 1z57_A 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA 326 (339)
T ss_dssp HHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHH
Confidence 332221000 0 0000 0 00011233456789999999999999999999999
Q ss_pred HH
Q 005734 646 IV 647 (680)
Q Consensus 646 ~~ 647 (680)
++
T Consensus 327 l~ 328 (339)
T 1z57_A 327 LK 328 (339)
T ss_dssp TT
T ss_pred hc
Confidence 85
No 222
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.1e-34 Score=299.26 Aligned_cols=242 Identities=14% Similarity=0.226 Sum_probs=180.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchh---hHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKD---WLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|... +|+.||||++....... ........+.+|++++++++||||+++++++.... .++
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~l 91 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED---YYI 91 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS---EEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc---eEE
Confidence 489999999999999975 68899999986543110 11123346889999999999999999999987653 699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eEEcccccccc
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA---AKVAEICFTTI 540 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ki~DFGla~~ 540 (680)
||||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 92 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 92 VLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 99999999999998643 4789999999999999999999998 9999999999999987654 99999999987
Q ss_pred cCCCCC-------cccccccCC---CCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCccccc
Q 005734 541 ALPKSK-------VSDDIENSV---LPPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMI 609 (680)
Q Consensus 541 ~~~~~~-------~~~~~~~~~---~~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 609 (680)
...... .....|+.. ....++.++|||||||++|||+||+.||..... ..+...+...... .
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~---- 239 (322)
T 2ycf_A 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN---F---- 239 (322)
T ss_dssp CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCC---C----
T ss_pred cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccc---c----
Confidence 653211 111223321 234568899999999999999999999975432 2333333221110 0
Q ss_pred CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.. ......++.+++.+||+.||++||++.++++
T Consensus 240 ~~~~---~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 240 IPEV---WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CHHH---HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred Cchh---hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0000 0112367899999999999999999999984
No 223
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.3e-34 Score=308.11 Aligned_cols=255 Identities=11% Similarity=0.155 Sum_probs=187.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC---CCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE---PFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~l 463 (680)
.+.||+|+||.||+|+.. +|+.||||++..... ......+.+|++++++++||||+++++++.... ....++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 91 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK----PLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI 91 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS----HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc----chHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence 389999999999999975 689999999864321 234567889999999999999999999987541 125799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+. |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 92 v~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 92 IQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 999996 699999864 3689999999999999999999998 999999999999999999999999999987652
Q ss_pred CCCc------------------ccccccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC
Q 005734 544 KSKV------------------SDDIENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN 604 (680)
Q Consensus 544 ~~~~------------------~~~~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 604 (680)
.... ....|+.. ....++.++|||||||++|||++|+.||.+.........+......+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCS
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCch
Confidence 2110 01112221 1245688899999999999999999999865433333333332222110
Q ss_pred ---cccccCc---------------ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 005734 605 ---FSCMIDP---------------SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVI 653 (680)
Q Consensus 605 ---~~~~~d~---------------~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~ 653 (680)
......+ .+.........++.+++.+|++.||++|||++|+++. ++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp TTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred hccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 0000000 0000011234678899999999999999999999873 44443
No 224
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=4e-35 Score=307.50 Aligned_cols=245 Identities=14% Similarity=0.248 Sum_probs=181.5
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|+..+ .+|||++....... ...+.|.+|++++++++||||+++++++.+.+ ..++|+||
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~iv~e~ 110 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE---DQLKAFKREVMAYRQTRHENVVLFMGACMSPP--HLAIITSL 110 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC---CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS--CEEEECBC
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH---HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--ceEEEeec
Confidence 4899999999999999864 48999886543211 12345788999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|.+++... ...+++..++.++.++++||+|||+. +|+||||||+||+++ ++.+||+|||+++.......
T Consensus 111 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 111 CKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred ccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 9999999999643 34689999999999999999999998 999999999999998 67999999999876431100
Q ss_pred -------c-----ccccccCCC---------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 547 -------V-----SDDIENSVL---------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 547 -------~-----~~~~~~~~~---------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
. ....|+... ...++.++||||||+++|||+||+.||...........+. ....
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~-- 260 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMG---TGMK-- 260 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHH---TTCC--
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhc---cCCC--
Confidence 0 011122111 2346788999999999999999999997654332222221 1110
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
...... ....++.+++.+||+.+|++|||+.+++++|+++....
T Consensus 261 ~~~~~~-------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 261 PNLSQI-------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCCCS-------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCcC-------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 000001 11246889999999999999999999999999987654
No 225
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=312.48 Aligned_cols=249 Identities=13% Similarity=0.181 Sum_probs=171.1
Q ss_pred cccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
++||+|+||+||+|+.. ++..||||++..... ...+.+|++++++++|||||++++++........++||
T Consensus 27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-------SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp CCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-------CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-------CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 68999999999999975 578899999864331 23578999999999999999999999654333689999
Q ss_pred EecCCCChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCCeEEcc
Q 005734 466 EYAPNGTVFEHLHIK-------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL----TDDYAAKVAE 534 (680)
Q Consensus 466 ey~~~GsL~~~l~~~-------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~ki~D 534 (680)
||++ |+|.+++... ....+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 9996 5888887521 223599999999999999999999998 99999999999999 7789999999
Q ss_pred cccccccCCCCC-----------cccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCcccc---------ccHHH
Q 005734 535 ICFTTIALPKSK-----------VSDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKE---------LSIEK 593 (680)
Q Consensus 535 FGla~~~~~~~~-----------~~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~---------~~~~~ 593 (680)
||+++....... .....|+.... ..++.++|||||||++|||+||+.||..... .+...
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~ 255 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHH
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHH
Confidence 999987642211 01112332222 3478889999999999999999999964331 11222
Q ss_pred HHHHHhcCCCC--cccccC-------------cccCCCC---------HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 594 WAADYLNEPRN--FSCMID-------------PSLKSFK---------QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 594 ~~~~~~~~~~~--~~~~~d-------------~~l~~~~---------~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.+...+..+.. ...+.. ....... .....++.+|+.+|++.||++|||++|+++.
T Consensus 256 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 22222221110 000000 0000000 0013467899999999999999999999874
No 226
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.7e-34 Score=299.89 Aligned_cols=248 Identities=13% Similarity=0.199 Sum_probs=176.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC----------
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE---------- 457 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~---------- 457 (680)
+.||+|+||.||+|... +|+.||||++.... ....+++.+|++++++++||||+++++++....
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 91 (320)
T 2i6l_A 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91 (320)
T ss_dssp EECC-----CEEEEEETTTTEEEEEEEEECCS-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecCC-----hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence 78999999999999986 58999999886543 334567899999999999999999999885321
Q ss_pred --CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeEEcc
Q 005734 458 --PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAE 534 (680)
Q Consensus 458 --~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~D 534 (680)
....++||||++ |+|.+++.. ..+++..+..++.++++||+|||+. +|+||||||+||+++ +++.+||+|
T Consensus 92 ~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 92 TELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred cccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 125689999997 699999853 3689999999999999999999998 999999999999997 567999999
Q ss_pred cccccccCCCCCcc-----------cccccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC
Q 005734 535 ICFTTIALPKSKVS-----------DDIENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 535 FGla~~~~~~~~~~-----------~~~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
||+++......... ...|+.. ....++.++||||||+++|||+||+.||...........+.......
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 244 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 99998764221110 1112211 12456888999999999999999999998654333322222211110
Q ss_pred C---------CcccccCccc-------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 603 R---------NFSCMIDPSL-------KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 603 ~---------~~~~~~d~~l-------~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. .....+.... .........++.+++.+|++.||++|||++|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0 0000000000 00011234678999999999999999999999863
No 227
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.3e-34 Score=316.91 Aligned_cols=243 Identities=16% Similarity=0.242 Sum_probs=184.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhh--------HHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDW--------LKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~--------~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
+.||+|+||+||+|+.. ++..||||++........ .....+.+.+|++++++++|||||++++++.+..
T Consensus 42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-- 119 (504)
T 3q5i_A 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK-- 119 (504)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--
Confidence 89999999999999975 678999999875432110 0122467899999999999999999999999877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeEEcccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY---AAKVAEIC 536 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---~~ki~DFG 536 (680)
..++|||||++|+|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 194 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFG 194 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEECCCT
T ss_pred EEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEEECC
Confidence 789999999999999998643 3699999999999999999999998 999999999999998775 69999999
Q ss_pred cccccCCCCCccc--ccccCCC----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 537 FTTIALPKSKVSD--DIENSVL----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 537 la~~~~~~~~~~~--~~~~~~~----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
+++.......... ..+.+.+ ...+++++||||+||++|||++|+.||.+.....+...+.. .......
T Consensus 195 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~~~~~~--- 268 (504)
T 3q5i_A 195 LSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK---GKYYFDF--- 268 (504)
T ss_dssp TCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CCCCCCH---
T ss_pred CCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc---CCCCCCc---
Confidence 9987654322111 1122222 23578899999999999999999999987554433333322 1111100
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.+.. ...++.+++.+|++.||++|||++|+++.
T Consensus 269 ~~~~~----~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 269 NDWKN----ISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCC----CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 01111 22578999999999999999999999864
No 228
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.6e-34 Score=312.67 Aligned_cols=187 Identities=13% Similarity=0.129 Sum_probs=149.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC---CceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP---FNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~l 463 (680)
.+.||+|+||.||+|+.. +|+.||||++..... .....+.+.+|++++++++|||||++++++..... ...++
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 107 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE---DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYI 107 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc---ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEE
Confidence 389999999999999974 688999999864321 13345679999999999999999999999976531 25799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+. |+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 v~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 108 VLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 999996 6999999643 4699999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCc------------------------------ccccccC-CCCCCCCCCCCeeehhHHHHHHHhCCCCC
Q 005734 544 KSKV------------------------------SDDIENS-VLPPLADPETNIYSFGILMLEIISGKLPY 583 (680)
Q Consensus 544 ~~~~------------------------------~~~~~~~-~~~~~~s~~sDVySfGvvllElltG~~p~ 583 (680)
.... ....|+. .....++.++||||+||++|||+||..||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 2110 0111222 12345788899999999999999865554
No 229
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=8.7e-34 Score=294.51 Aligned_cols=237 Identities=16% Similarity=0.261 Sum_probs=179.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC----------
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE---------- 457 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~---------- 457 (680)
+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHT------EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEEE------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred heeccCCcEEEEEEEEcCCCeEEEEEEEecc------HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 89999999999999974 7899999998542 234567999999999999999999999986532
Q ss_pred -CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 458 -PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 458 -~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
....++||||+++|+|.+++... ...+++..+++++.++++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred cCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCc
Confidence 12568999999999999999743 34678999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCC----------------------cccccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHH
Q 005734 537 FTTIALPKSK----------------------VSDDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEK 593 (680)
Q Consensus 537 la~~~~~~~~----------------------~~~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~ 593 (680)
+++....... .....|+... ...++.++||||||+++|||+| ||.... +...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~--~~~~ 236 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM--ERVN 236 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--HHHH
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--hHHH
Confidence 9986542110 0011122222 2357889999999999999999 554221 1112
Q ss_pred HHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 594 WAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 594 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
............. + .........+.+++.+||+.||++|||++++++
T Consensus 237 ~~~~~~~~~~~~~----~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 237 ILKKLRSVSIEFP----P---DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHSTTCCCC----T---TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhccccccccC----c---cccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 2222211111111 1 122233467889999999999999999999986
No 230
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=3.2e-34 Score=309.86 Aligned_cols=251 Identities=12% Similarity=0.109 Sum_probs=184.4
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC--------CCcccceeeEEecC--
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN--------HKNFVNLIGYCEDD-- 456 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~--------H~niv~l~g~~~~~-- 456 (680)
.+.||+|+||+||+|+. .+|+.||||++... ....+.+.+|++++++++ |+||+++++++...
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA------EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecC------CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 38899999999999986 46889999998633 233567889999999985 78899999998722
Q ss_pred CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC--------
Q 005734 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-------- 528 (680)
Q Consensus 457 ~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-------- 528 (680)
.....++||||+ +|+|.+++.......+++..+..|+.|++.||+|||+.+ +|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhh
Confidence 112679999999 667777776555567999999999999999999999864 799999999999999775
Q ss_pred -----------------------------------------CeEEcccccccccCCCCCcc-----cccccCCCCCCCCC
Q 005734 529 -----------------------------------------AAKVAEICFTTIALPKSKVS-----DDIENSVLPPLADP 562 (680)
Q Consensus 529 -----------------------------------------~~ki~DFGla~~~~~~~~~~-----~~~~~~~~~~~~s~ 562 (680)
.+||+|||+++......... ...|+......++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 272 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNT 272 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCT
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCc
Confidence 79999999998765332221 12233333445788
Q ss_pred CCCeeehhHHHHHHHhCCCCCCccccc------cHHHHHHHHhcCCC--------CcccccCc--c--------------
Q 005734 563 ETNIYSFGILMLEIISGKLPYCEEKEL------SIEKWAADYLNEPR--------NFSCMIDP--S-------------- 612 (680)
Q Consensus 563 ~sDVySfGvvllElltG~~p~~~~~~~------~~~~~~~~~~~~~~--------~~~~~~d~--~-------------- 612 (680)
++|||||||++|||+||+.||...... .....+........ .....+.. .
T Consensus 273 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 1wak_A 273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFE 352 (397)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhH
Confidence 999999999999999999999743211 11111211111100 00000000 0
Q ss_pred ----cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 613 ----LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 613 ----l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....+.+....+.+|+.+||+.||++|||++|+++
T Consensus 353 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 353 VLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01234566788999999999999999999999985
No 231
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.5e-34 Score=306.50 Aligned_cols=249 Identities=13% Similarity=0.214 Sum_probs=186.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC---CceEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP---FNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lV 464 (680)
+.||+|+||.||+|... ++..||||++..... ......+.+|++++.+++||||+++++++..... ...++|
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv 108 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH----QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIV 108 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTTC----HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEeccccC----cHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEE
Confidence 89999999999999974 788899999864331 2345678999999999999999999999975431 246999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
+||++ |+|.+++... .+++..+..|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 109 ~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 109 QDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 99996 6999998643 589999999999999999999998 9999999999999999999999999999876532
Q ss_pred CCcc------c-----ccccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--cccccC
Q 005734 545 SKVS------D-----DIENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCMID 610 (680)
Q Consensus 545 ~~~~------~-----~~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~d 610 (680)
.... . ..|+.. ....++.++|||||||++|||+||+.||.+....+....+......+.. .....+
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 261 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 1111 1 112221 1234688999999999999999999999876555544444333222110 000000
Q ss_pred ------------c---ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 611 ------------P---SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 611 ------------~---~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+ .+.........++.+++.+|++.||++|||+.|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 0000011223578899999999999999999999874
No 232
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=7.2e-34 Score=306.11 Aligned_cols=249 Identities=15% Similarity=0.145 Sum_probs=186.2
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CC-----cccceeeEEecCCCCce
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HK-----NFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~-----niv~l~g~~~~~~~~~~ 461 (680)
+.||+|+||+||+|... +|+.||||++... .....++..|++++..++ |+ +|+++++++...+ ..
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--~~ 131 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK------KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN--HL 131 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSS------HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT--EE
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEecc------HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC--ce
Confidence 89999999999999975 6889999998643 223456778888888885 55 4999999998877 78
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec--CCCCeEEccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT--DDYAAKVAEICFTT 539 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld--~~~~~ki~DFGla~ 539 (680)
++||||++ |+|.+++.......+++..+..++.|++.||+|||+. ..+|+||||||+|||++ .++.+||+|||+++
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 99999995 6999999876656799999999999999999999952 23899999999999994 57889999999998
Q ss_pred ccCCCCCcc-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--------cc
Q 005734 540 IALPKSKVS-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--------FS 606 (680)
Q Consensus 540 ~~~~~~~~~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--------~~ 606 (680)
......... ...|+......++.++|||||||++|||+||+.||.+....+....+......+.. ..
T Consensus 210 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 289 (382)
T 2vx3_A 210 QLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKAR 289 (382)
T ss_dssp ETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHH
T ss_pred ecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHH
Confidence 765332211 22344444456789999999999999999999999875544443333332221100 00
Q ss_pred ccc----C-----------------ccc---------------------CCCCHHHHHHHHHHHHHccccCCCCCCCHHH
Q 005734 607 CMI----D-----------------PSL---------------------KSFKQNELEAICEVIKECIKTDLRQRPTMND 644 (680)
Q Consensus 607 ~~~----d-----------------~~l---------------------~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~e 644 (680)
..+ + +.. ......+..++.+|+.+||+.||++|||++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e 369 (382)
T 2vx3_A 290 KFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYY 369 (382)
T ss_dssp HHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred HHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHH
Confidence 000 0 000 0011234467899999999999999999999
Q ss_pred HHH
Q 005734 645 IIV 647 (680)
Q Consensus 645 v~~ 647 (680)
+++
T Consensus 370 ~L~ 372 (382)
T 2vx3_A 370 ALQ 372 (382)
T ss_dssp HTT
T ss_pred Hhc
Confidence 975
No 233
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=4.1e-34 Score=305.16 Aligned_cols=264 Identities=12% Similarity=0.167 Sum_probs=178.7
Q ss_pred HHHHhhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC
Q 005734 380 LDTACEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456 (680)
Q Consensus 380 l~~~~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 456 (680)
.....++|. +.||+|+||.||+|+.. +|+.||||++..... ....+.+|++.+.+++|||||++++++...
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR------FRNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT------CCCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred chhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc------ccHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 344455565 89999999999999984 789999998854321 123467788889999999999999999653
Q ss_pred CC-----CceEEEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCCeeecCCCCCCeeecC-
Q 005734 457 EP-----FNRMMVFEYAPNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQYMH--HELNPPVAHSNLSSHCIYLTD- 526 (680)
Q Consensus 457 ~~-----~~~~lV~ey~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~yLH--~~~~~~ivHrDlKp~NILld~- 526 (680)
+. ...++||||+++ +|.+.+.. .....+++..+..++.+++.||+||| +. +|+||||||+|||++.
T Consensus 92 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp CSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETT
T ss_pred ccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCC
Confidence 31 126899999976 55554432 24457899999999999999999999 66 9999999999999996
Q ss_pred CCCeEEcccccccccCCCCCcc-------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHH
Q 005734 527 DYAAKVAEICFTTIALPKSKVS-------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADY 598 (680)
Q Consensus 527 ~~~~ki~DFGla~~~~~~~~~~-------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~ 598 (680)
++.+||+|||+++......... ...|+... ...++.++|||||||++|||+||+.||...........+...
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 247 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247 (360)
T ss_dssp TTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred CCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence 8999999999998765332211 11233222 234788999999999999999999999865543333333222
Q ss_pred hcCCC-CcccccCc-----------------ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 005734 599 LNEPR-NFSCMIDP-----------------SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVI 653 (680)
Q Consensus 599 ~~~~~-~~~~~~d~-----------------~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~ 653 (680)
...+. .....+++ .+.........++.+++.+||+.||++|||+.|+++. ++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 21110 00000000 0011122245789999999999999999999999975 45543
No 234
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5e-34 Score=311.11 Aligned_cols=253 Identities=14% Similarity=0.201 Sum_probs=181.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC----CCceE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE----PFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~ 462 (680)
.+.||+|+||.||+|+.. +|+.||||++.... +.+.+|++++++++|||||++++++.... ....+
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 388999999999999985 68999999885432 12347999999999999999999986422 11357
Q ss_pred EEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeEEccccccc
Q 005734 463 MVFEYAPNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-YAAKVAEICFTT 539 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~ki~DFGla~ 539 (680)
+||||+++ +|.+.+.. .....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999975 67666542 2345799999999999999999999998 99999999999999965 678999999998
Q ss_pred ccCCCCCcc-------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC---------
Q 005734 540 IALPKSKVS-------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP--------- 602 (680)
Q Consensus 540 ~~~~~~~~~-------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~--------- 602 (680)
......... ...||.... ..++.++|||||||++|||+||+.||.+....+....+...+..+
T Consensus 206 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~ 285 (420)
T 1j1b_A 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285 (420)
T ss_dssp ECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC
T ss_pred hcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 764322111 112232222 357889999999999999999999998654333222222221111
Q ss_pred CCcccccCcccCC------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 005734 603 RNFSCMIDPSLKS------FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVI 653 (680)
Q Consensus 603 ~~~~~~~d~~l~~------~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~ 653 (680)
........+.+.. +......++.+|+.+|++.||++||++.|+++. ++++.
T Consensus 286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 0011111111111 112234688999999999999999999999864 44443
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.4e-33 Score=291.51 Aligned_cols=239 Identities=19% Similarity=0.275 Sum_probs=185.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +++.||||++...... ......+.+|++++++++||||+++++++.+.+ ..++|+|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 101 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK---NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGE 101 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS---SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc---hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC--eEEEEEE
Confidence 389999999999999985 7899999998654322 123457899999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD---YAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~ki~DFGla~~~~~ 543 (680)
|+++++|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.+ +.+||+|||+++....
T Consensus 102 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 102 LYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred ccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 99999999988643 3689999999999999999999998 99999999999999754 4799999999987653
Q ss_pred CCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 544 KSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 544 ~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
..... ...|+... +.++.++||||||+++|||+||+.||...........+.. ...... .+....
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~---~~~~~~- 248 (287)
T 2wei_A 177 NTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET---GKYAFD---LPQWRT- 248 (287)
T ss_dssp CSSCSCHHHHHTTCCHHHHT-TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CCCCCC---SGGGTT-
T ss_pred CCccccccCcccccChHHhc-CCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc---CCCCCC---chhhhh-
Confidence 32211 11122222 3478899999999999999999999986543333332222 111110 011111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...++.+++.+|++.||++|||+.|+++
T Consensus 249 ---~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 249 ---ISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---cCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 2357889999999999999999999987
No 236
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.1e-33 Score=295.93 Aligned_cols=237 Identities=16% Similarity=0.259 Sum_probs=180.8
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC--CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN--HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||++...+|+.||||++...... ......+.+|++++.+++ |+||+++++++...+ ..++|||
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~e 108 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD---NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVME 108 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCC---HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEecccccc---ccchHHHHHHHHHHHhccccCCceEEEEEEeecCC--EEEEEEe
Confidence 899999999999999988999999998754322 334567999999999997 599999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
+.+|+|.+++... ..+++..+..++.++++||+|||+. +|+||||||+||++++ +.+||+|||+++.......
T Consensus 109 -~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~ 181 (313)
T 3cek_A 109 -CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT 181 (313)
T ss_dssp -CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC------
T ss_pred -cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCccc
Confidence 5688999999754 3689999999999999999999998 9999999999999975 8899999999987643211
Q ss_pred c----------ccccccCCC-----------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 547 V----------SDDIENSVL-----------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 547 ~----------~~~~~~~~~-----------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
. ....|+... ...++.++||||||+++|||+||+.||..... ...............
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~ 259 (313)
T 3cek_A 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--QISKLHAIIDPNHEI 259 (313)
T ss_dssp --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS--HHHHHHHHHCTTSCC
T ss_pred cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH--HHHHHHHHHhccccc
Confidence 1 111222221 13567789999999999999999999975431 122222222221110
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..+.....++.+++.+||+.||++||+++|+++.
T Consensus 260 ---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 260 ---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp ---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0111113578899999999999999999999874
No 237
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.4e-34 Score=311.09 Aligned_cols=254 Identities=14% Similarity=0.198 Sum_probs=181.6
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
.+.||+|+||+||+|+..++..+|||++..... ...+|++++++++|||||++++++...+. ...++
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 389999999999999998777799998754321 12379999999999999999999965431 13679
Q ss_pred EEEecCCCChhhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeEEccccccccc
Q 005734 464 VFEYAPNGTVFEHLH-IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAEICFTTIA 541 (680)
Q Consensus 464 V~ey~~~GsL~~~l~-~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~DFGla~~~ 541 (680)
||||++++.+....+ ......+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999998644333322 12345799999999999999999999998 999999999999999 7999999999999876
Q ss_pred CCCCCcc-------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC---------
Q 005734 542 LPKSKVS-------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--------- 604 (680)
Q Consensus 542 ~~~~~~~-------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--------- 604 (680)
....... ...|+.... ..++.++|||||||++|||++|+.||.+....+....+...+..+..
T Consensus 193 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~ 272 (394)
T 4e7w_A 193 IAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPN 272 (394)
T ss_dssp CTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGG
T ss_pred cCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChh
Confidence 4322111 112232222 34788999999999999999999999875533333222222211100
Q ss_pred cccccCcccC------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 005734 605 FSCMIDPSLK------SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVI 653 (680)
Q Consensus 605 ~~~~~d~~l~------~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~ 653 (680)
.....-+... .+......++.+++.+||+.||++|||+.|+++. ++++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 273 YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp GSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred hhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 0000000000 0112234689999999999999999999999875 44443
No 238
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=8e-34 Score=300.29 Aligned_cols=242 Identities=13% Similarity=0.214 Sum_probs=166.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC--CCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE--PFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~~~lV~ 465 (680)
++||+|+||+||+|... +|+.||||++.... ...+ .....+..++||||+++++++.... ....++||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 105 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP------KARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM 105 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSH------HHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH------HHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence 57999999999999986 78999999985421 1112 2223356678999999999987521 11468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEcccccccccC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIAL 542 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~~ 542 (680)
||+++|+|.+++.......+++.++.+|+.+++.||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 106 e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 106 ECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp ECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 999999999999866656799999999999999999999998 9999999999999976 4569999999998764
Q ss_pred CCCCcc------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 543 PKSKVS------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 543 ~~~~~~------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
...... ...|+......+++++||||||+++|||+||+.||.................... . ..-.+.
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~-~~~~~~---- 256 (336)
T 3fhr_A 183 QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ-Y-GFPNPE---- 256 (336)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CCCTTT----
T ss_pred ccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccc-c-ccCchh----
Confidence 322111 1123333333456779999999999999999999975442222111111111000 0 000011
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
......++.+++.+|++.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 257 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp STTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11233678899999999999999999999974
No 239
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.2e-33 Score=298.47 Aligned_cols=248 Identities=13% Similarity=0.165 Sum_probs=186.7
Q ss_pred ccccCCCCCCeEEEEEeC-CC-CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc------ccceeeEEecCCCC
Q 005734 388 SNIIDTQSGCTIYKGTLS-SG-VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN------FVNLIGYCEDDEPF 459 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g-~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~~~ 459 (680)
.+.||+|+||+||+|... ++ ..||||++... ......+.+|++++++++|+| ++.+.+++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-- 95 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNV------GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG-- 95 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT--
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEccc------ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC--
Confidence 389999999999999974 44 68999998632 233457888999999997766 899999998877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---------------
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL--------------- 524 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl--------------- 524 (680)
..++||||+ +|+|.+++.......+++..+..|+.|++.||+|||+. +|+||||||+|||+
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccc
Confidence 789999999 67888888766556799999999999999999999998 99999999999999
Q ss_pred ----cCCCCeEEcccccccccCCCCCcc-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHH
Q 005734 525 ----TDDYAAKVAEICFTTIALPKSKVS-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA 595 (680)
Q Consensus 525 ----d~~~~~ki~DFGla~~~~~~~~~~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~ 595 (680)
+.++.+||+|||+++......... ...|+......++.++|||||||++|||+||+.||...........+
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 668899999999998755332221 12234344456789999999999999999999999865543333333
Q ss_pred HHHhcCCCC--------cccccCc----------------------ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 005734 596 ADYLNEPRN--------FSCMIDP----------------------SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645 (680)
Q Consensus 596 ~~~~~~~~~--------~~~~~d~----------------------~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev 645 (680)
......... ....... ...........++.+++.+||+.||++|||+.|+
T Consensus 252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 331 (355)
T 2eu9_A 252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 331 (355)
T ss_dssp HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence 333221100 0000000 0001123345689999999999999999999999
Q ss_pred HH
Q 005734 646 IV 647 (680)
Q Consensus 646 ~~ 647 (680)
++
T Consensus 332 l~ 333 (355)
T 2eu9_A 332 LL 333 (355)
T ss_dssp TT
T ss_pred hc
Confidence 85
No 240
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.9e-33 Score=293.10 Aligned_cols=240 Identities=15% Similarity=0.222 Sum_probs=167.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|... +|+.||||++...... ....+.+..+..+++.++||||+++++++.+.+ ..++||||
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 105 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK---EENKRILMDLDVVLKSHDCPYIVQCFGTFITNT--DVFIAMEL 105 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSCH---HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECC
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEecccccc---hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC--cEEEEEec
Confidence 78999999999999985 7899999998754322 223344555666788889999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHH-ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
+ ++.+..+.. .....+++..+..++.++++||+|||+ . +|+||||||+||+++.++.+||+|||+++.......
T Consensus 106 ~-~~~~~~l~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 106 M-GTCAEKLKK-RMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp C-SEEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred c-CCcHHHHHH-HhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 9 445544443 334578999999999999999999998 4 899999999999999999999999999976543211
Q ss_pred c-------ccccccCC-----CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 547 V-------SDDIENSV-----LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 547 ~-------~~~~~~~~-----~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
. ....|+.. ....++.++||||||+++|||+||+.||..... ..+............. +..
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~----~~~- 253 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT--DFEVLTKVLQEEPPLL----PGH- 253 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS--HHHHHHHHHHSCCCCC----CSS-
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc--cHHHHHHHhccCCCCC----Ccc-
Confidence 1 11123322 234567889999999999999999999975321 1122222222211100 000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+||+.||++||+++++++.
T Consensus 254 ---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 254 ---MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ---SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ---CCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1122578899999999999999999999863
No 241
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.6e-33 Score=308.40 Aligned_cols=236 Identities=14% Similarity=0.146 Sum_probs=173.9
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||+||.+...+|+.||||++.... ...+.+|++++.++ +|||||++++++.+.+ ..++||||
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~~lv~E~ 90 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--------CDIALMEIKLLTESDDHPNVIRYYCSETTDR--FLYIALEL 90 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGGG--------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEEEECC
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--------HHHHHHHHHHHHhccCCCCcCeEEEEEecCC--eEEEEEec
Confidence 7899999999987767789999999886432 23578899999886 8999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCC-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-------------CC
Q 005734 468 APNGTVFEHLHIKEMD-----HLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-------------YA 529 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~-----~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-------------~~ 529 (680)
+. |+|.+++...... ..++..+++|+.||+.||+|||+. +|+||||||+|||++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceE
Confidence 95 7999999754321 123345678999999999999998 99999999999999754 58
Q ss_pred eEEcccccccccCCCCCc------------ccccccCCC-------CCCCCCCCCeeehhHHHHHHHh-CCCCCCccccc
Q 005734 530 AKVAEICFTTIALPKSKV------------SDDIENSVL-------PPLADPETNIYSFGILMLEIIS-GKLPYCEEKEL 589 (680)
Q Consensus 530 ~ki~DFGla~~~~~~~~~------------~~~~~~~~~-------~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~ 589 (680)
+||+|||+++........ ....|+... ...++.++|||||||++|||+| |+.||.+....
T Consensus 167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~ 246 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246 (434)
T ss_dssp EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence 999999999876532211 111222221 2457889999999999999999 99999754321
Q ss_pred cHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 590 SIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.......... .... + .........++.+++.+||+.||++|||+.||++
T Consensus 247 -~~~i~~~~~~----~~~~--~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 -ESNIIRGIFS----LDEM--K--CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp -HHHHHHTCCC----CCCC--T--TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHhcCCCC----cccc--c--ccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1122211111 1100 0 0123456678999999999999999999999985
No 242
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.8e-33 Score=296.21 Aligned_cols=242 Identities=14% Similarity=0.197 Sum_probs=173.4
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHH-HHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVD-TLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||+|... +|+.||||++..... .....++..|+. +++.++||||+++++++.+.+ ..++|||
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~--~~~lv~e 101 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD----EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG--DCWICME 101 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC----HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccC----chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC--ceEEEEe
Confidence 78999999999999985 789999999875432 223345566666 777789999999999999877 7799999
Q ss_pred ecCCCChhhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHI---KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~---~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+++ +|.+++.. .....+++..+.+++.++++||+|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9974 88887752 23457999999999999999999999842 799999999999999999999999999987643
Q ss_pred CCCcc-------cccccCC----CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 544 KSKVS-------DDIENSV----LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 544 ~~~~~-------~~~~~~~----~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
..... ...|+.. ....++.++||||||+++|||+||+.||..... ..+........ ..+.
T Consensus 179 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~-------~~~~ 249 (327)
T 3aln_A 179 SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNS--VFDQLTQVVKG-------DPPQ 249 (327)
T ss_dssp ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CCCCCS-------CCCC
T ss_pred ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcch--HHHHHHHHhcC-------CCCC
Confidence 22111 1123332 233467899999999999999999999975321 11111111110 0011
Q ss_pred cC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 613 LK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 613 l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+. ........++.+++.+||+.||++||++.++++.
T Consensus 250 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 250 LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 11 0111234678999999999999999999999763
No 243
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.5e-33 Score=300.44 Aligned_cols=252 Identities=15% Similarity=0.191 Sum_probs=184.2
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-----------CCcccceeeEEec
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-----------HKNFVNLIGYCED 455 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-----------H~niv~l~g~~~~ 455 (680)
.+.||+|+||+||+|+. .+|+.||||++... ......+.+|++++.+++ |+||+++++++..
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD------KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCC------ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 48999999999999997 57899999998632 223456889999999886 8999999999875
Q ss_pred CCC--CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec------CC
Q 005734 456 DEP--FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT------DD 527 (680)
Q Consensus 456 ~~~--~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld------~~ 527 (680)
.++ ...++||||+ +++|.+++.......+++..+.+|+.|++.||+|||+.+ +|+||||||+|||++ ..
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCc
Confidence 431 2468999999 899999997655567999999999999999999999853 799999999999994 44
Q ss_pred CCeEEcccccccccCCCCCccc-----ccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc------cHHHHHH
Q 005734 528 YAAKVAEICFTTIALPKSKVSD-----DIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL------SIEKWAA 596 (680)
Q Consensus 528 ~~~ki~DFGla~~~~~~~~~~~-----~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~------~~~~~~~ 596 (680)
+.+||+|||+++.......... ..|+......++.++|||||||++|||+||+.||...... .....+.
T Consensus 175 ~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254 (373)
T ss_dssp EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred ceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence 5899999999987653322221 2233333456789999999999999999999999753311 1111111
Q ss_pred HHhcCC------------------CCcccccC----------cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 597 DYLNEP------------------RNFSCMID----------PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 597 ~~~~~~------------------~~~~~~~d----------~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..+... .....+.. ......+.....++.+|+.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 111110 00000000 00012346677899999999999999999999999873
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=294.32 Aligned_cols=234 Identities=17% Similarity=0.343 Sum_probs=175.3
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcC----CCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRI----NHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l----~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+. .+|+.||||++......... ......+.+|++++.++ +|+||+++++++...+ ..
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~--~~ 113 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE--GF 113 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-------C
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC--eE
Confidence 38999999999999986 47889999998654322111 11234567899999998 8999999999998776 56
Q ss_pred EEEEEe-cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeEEccccccc
Q 005734 462 MMVFEY-APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAEICFTT 539 (680)
Q Consensus 462 ~lV~ey-~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~DFGla~ 539 (680)
++|+|| +++++|.+++... ..+++..++.++.++++||+|||+. +|+||||||+||+++ +++.+||+|||+++
T Consensus 114 ~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~ 188 (312)
T 2iwi_A 114 MLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGA 188 (312)
T ss_dssp EEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECCCSSCE
T ss_pred EEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEEcchhh
Confidence 999999 7899999999653 3689999999999999999999998 999999999999999 88999999999998
Q ss_pred ccCCCCCcc-cccccCCCC-----C-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 540 IALPKSKVS-DDIENSVLP-----P-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 540 ~~~~~~~~~-~~~~~~~~~-----~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
......... .....+..| . ..+.++||||||+++|||+||+.||.... +... ....+
T Consensus 189 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~----~~~~~------- 252 (312)
T 2iwi_A 189 LLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-----EILE----AELHF------- 252 (312)
T ss_dssp ECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHHH----TCCCC-------
T ss_pred hcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-----HHhh----hccCC-------
Confidence 765332111 111122222 1 22457999999999999999999996532 1111 10111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.....++.+++.+||+.+|++|||++|+++.
T Consensus 253 ----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 253 ----PAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11123578899999999999999999999873
No 245
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.2e-33 Score=296.77 Aligned_cols=233 Identities=14% Similarity=0.270 Sum_probs=179.3
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHH-HHHHHHHHHHHHHHcCC--CCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLK-SQEMAYRKQVDTLSRIN--HKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~-~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|+. .+|+.||||++.......... .....+.+|++++++++ |+||+++++++..++ ..++
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~--~~~l 125 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--SFVL 125 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--EEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC--cEEE
Confidence 38999999999999986 578999999987543221100 11235778999999996 599999999999877 6799
Q ss_pred EEEecCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeEEccccccccc
Q 005734 464 VFEYAPN-GTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAEICFTTIA 541 (680)
Q Consensus 464 V~ey~~~-GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~DFGla~~~ 541 (680)
|+||+.+ ++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+|||+++..
T Consensus 126 v~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~ 200 (320)
T 3a99_A 126 ILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL 200 (320)
T ss_dssp EEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCcccccc
Confidence 9999976 8999999653 3689999999999999999999998 999999999999999 7899999999999876
Q ss_pred CCCCCcc-cccccCCCC------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 542 LPKSKVS-DDIENSVLP------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 542 ~~~~~~~-~~~~~~~~~------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
....... ...+.+..| ...+.++||||||+++|||+||+.||.... .... ..... ..
T Consensus 201 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~----~~~~~----~~--- 264 (320)
T 3a99_A 201 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIR----GQVFF----RQ--- 264 (320)
T ss_dssp CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHHH----CCCCC----SS---
T ss_pred ccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-----hhhc----ccccc----cc---
Confidence 5322111 111222222 223677899999999999999999996532 1111 11111 11
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++.+++.+||+.||++|||++||++
T Consensus 265 ----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 265 ----RVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 12257889999999999999999999986
No 246
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-33 Score=304.50 Aligned_cols=233 Identities=16% Similarity=0.185 Sum_probs=170.1
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +|||||++++++.+.. ..++||||
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~~lv~E~ 99 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--------SFADREVQLLRESDEHPNVIRYFCTEKDRQ--FQYIAIEL 99 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTE--------EECHHHHHHHHHSCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--------HHHHHHHHHHHhccCCCCcCeEEEEEecCC--EEEEEEEC
Confidence 89999999996655556789999999864321 1356899999999 7999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-----CCCCeEEcccccccccC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-----DDYAAKVAEICFTTIAL 542 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-----~~~~~ki~DFGla~~~~ 542 (680)
|+ |+|.+++.... ....+..++.|+.||++||+|||+. +|+||||||+|||++ ....+||+|||+++...
T Consensus 100 ~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 100 CA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 96 69999997543 2345556789999999999999998 999999999999994 33468899999998765
Q ss_pred CCCC-----------cccccccCCC---CCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCccc
Q 005734 543 PKSK-----------VSDDIENSVL---PPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSC 607 (680)
Q Consensus 543 ~~~~-----------~~~~~~~~~~---~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (680)
.... .....|+... ....+.++|||||||+++||+| |+.||...... ... ..... .....
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-~~~---~~~~~-~~~~~ 249 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-QAN---ILLGA-CSLDC 249 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-HHH---HHTTC-CCCTT
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-HHH---HHhcc-CCccc
Confidence 3211 1111233332 2345668999999999999999 99998643311 111 11111 11110
Q ss_pred ccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 ~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..........+.+++.+||+.||++|||++||++
T Consensus 250 ------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 250 ------LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0112234456889999999999999999999984
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.98 E-value=8.2e-33 Score=312.35 Aligned_cols=259 Identities=14% Similarity=0.168 Sum_probs=190.0
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC----CCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE----PFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~ 462 (680)
.+.||+|+||.||+|.. .+|+.||||++..... ....+.|.+|++++++++|||||++++++.... ....+
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~----~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~ 94 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS----PKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL 94 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCC----HHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCC
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCC----HHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEE
Confidence 48999999999999997 4689999998864321 344567999999999999999999999976511 12568
Q ss_pred EEEEecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eEEcccccc
Q 005734 463 MVFEYAPNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA---AKVAEICFT 538 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ki~DFGla 538 (680)
+||||+++|+|.+++.... ...+++..+..|+.+++.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 95 LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp CEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 9999999999999997543 34689999999999999999999998 9999999999999997664 899999999
Q ss_pred cccCCCCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC-------CC
Q 005734 539 TIALPKSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-------RN 604 (680)
Q Consensus 539 ~~~~~~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-------~~ 604 (680)
+........ ....|+......++.++||||||+++|||+||+.||.... ....|........ ..
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~--~~~~~~~~i~~~~~~~~~~~~~ 249 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW--QPVQWHGKVREKSNEHIVVYDD 249 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC--HHHHSSTTCC------CCSCCC
T ss_pred cccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc--chhhhhhhhhcccchhhhhhhh
Confidence 876533211 1223444445567889999999999999999999996532 1122211110000 00
Q ss_pred ccc--ccCcc---cCCCCHHHHHHHHHHHHHccccCCCCCCCHHH-----HHHHHHHhhcc
Q 005734 605 FSC--MIDPS---LKSFKQNELEAICEVIKECIKTDLRQRPTMND-----IIVQLRQVINI 655 (680)
Q Consensus 605 ~~~--~~d~~---l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~e-----v~~~L~~i~~~ 655 (680)
... .+... ...........+.+++.+|++.||++|||+.+ ..+.++++...
T Consensus 250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 000 00001 11234556788999999999999999999988 55677777543
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=2e-32 Score=316.59 Aligned_cols=232 Identities=15% Similarity=0.162 Sum_probs=177.7
Q ss_pred ccccCCCCCCeEEEEEeC--CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC---ceE
Q 005734 388 SNIIDTQSGCTIYKGTLS--SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF---NRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~--~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~---~~~ 462 (680)
.+.||+|+||.||+|... +|+.||||++..... ......|.+|++++.+++|||||++++++...+.. ..+
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~ 160 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD----AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGY 160 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC----HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC----HHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeE
Confidence 389999999999999975 689999998864321 23456789999999999999999999999875521 159
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
|||||+++++|.+++.. .++|.+++.|+.||++||+|||+. +|+||||||+|||++++ .+||+|||+++...
T Consensus 161 lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 161 IVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 99999999999988743 699999999999999999999998 99999999999999986 89999999998765
Q ss_pred CCCCcccccccCCCCC----CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 543 PKSKVSDDIENSVLPP----LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 543 ~~~~~~~~~~~~~~~~----~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
...... ..+.+..|+ ..+.++|||||||+++||++|..|+.+..... ... .....
T Consensus 233 ~~~~~~-gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------------~~~------~~~~~ 291 (681)
T 2pzi_A 233 SFGYLY-GTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDG--------------LPE------DDPVL 291 (681)
T ss_dssp CCSCCC-CCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSS--------------CCT------TCHHH
T ss_pred cCCccC-CCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccccc--------------ccc------ccccc
Confidence 432221 222333332 23778999999999999999998876422100 000 00001
Q ss_pred HHHHHHHHHHHHccccCCCCCCC-HHHHHHHHHHh
Q 005734 619 NELEAICEVIKECIKTDLRQRPT-MNDIIVQLRQV 652 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPt-m~ev~~~L~~i 652 (680)
.....+.+++.+||+.||++||+ ++++...|..+
T Consensus 292 ~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 292 KTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 22357889999999999999995 77777777655
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=1.5e-32 Score=298.68 Aligned_cols=236 Identities=13% Similarity=0.131 Sum_probs=165.6
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC-Ccccceee---------E----
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH-KNFVNLIG---------Y---- 452 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g---------~---- 452 (680)
.++||+|+||.||+|+. .+|+.||||++....... ....+.|.+|+.+++.++| +|...... .
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~--~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP--SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP 160 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC------CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECC
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCcc--HHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccC
Confidence 37999999999999995 579999999887433221 2234679999999999987 32211111 1
Q ss_pred --------EecCC---CCceEEEEEecCCCChhhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecC
Q 005734 453 --------CEDDE---PFNRMMVFEYAPNGTVFEHLH-----IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516 (680)
Q Consensus 453 --------~~~~~---~~~~~lV~ey~~~GsL~~~l~-----~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrD 516 (680)
..... ....+++|+++ +|+|.+++. ......++|..++.|+.|+++||+|||+. +|+|||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrD 236 (413)
T 3dzo_A 161 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTY 236 (413)
T ss_dssp C---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred CCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence 11111 11346666665 789999984 22344688999999999999999999998 999999
Q ss_pred CCCCCeeecCCCCeEEcccccccccCCCCCcc----cccccCC----------CCCCCCCCCCeeehhHHHHHHHhCCCC
Q 005734 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVS----DDIENSV----------LPPLADPETNIYSFGILMLEIISGKLP 582 (680)
Q Consensus 517 lKp~NILld~~~~~ki~DFGla~~~~~~~~~~----~~~~~~~----------~~~~~s~~sDVySfGvvllElltG~~p 582 (680)
|||+|||++.++.+||+|||+++......... ...||.. ....++.++|||||||++|||+||+.|
T Consensus 237 iKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999988754321111 1122222 222356789999999999999999999
Q ss_pred CCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 583 YCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
|.......... .++. .... .+.++.+++.+||+.||++||++.++++
T Consensus 317 f~~~~~~~~~~-------------~~~~-~~~~----~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAALGGSE-------------WIFR-SCKN----IPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGGSCSG-------------GGGS-SCCC----CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchhhhHH-------------HHHh-hccc----CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 97643221111 1111 0011 2267899999999999999999777643
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.96 E-value=5.8e-31 Score=278.24 Aligned_cols=238 Identities=11% Similarity=0.088 Sum_probs=167.4
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchh---hHHHHHHHHHHHHHHHHcCC---------CCcccceeeEEe-
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKD---WLKSQEMAYRKQVDTLSRIN---------HKNFVNLIGYCE- 454 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~---~~~~~~~~f~~E~~~l~~l~---------H~niv~l~g~~~- 454 (680)
.+.||+|+||+||+|+. +|+.||||++....... ......+.+.+|++++++++ |||||++.+.+.
T Consensus 25 ~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~ 103 (336)
T 2vuw_A 25 CEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV 103 (336)
T ss_dssp CEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred eeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence 48999999999999998 68999999998654210 01112356788888888885 666666666542
Q ss_pred ----------------c-------------CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 005734 455 ----------------D-------------DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMH 505 (680)
Q Consensus 455 ----------------~-------------~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH 505 (680)
+ .+ ..++||||+++|++.+.+.. ..+++.....|+.|++.||+|||
T Consensus 104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~--~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~~lH 178 (336)
T 2vuw_A 104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD--QLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLAVAE 178 (336)
T ss_dssp ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTT--CEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHhhhccccccCccccccC--eEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH
Confidence 2 33 67999999999987777643 46899999999999999999999
Q ss_pred -cCCCCCeeecCCCCCCeeecCCC--------------------CeEEcccccccccCCCCC---cccccccCCCCCCCC
Q 005734 506 -HELNPPVAHSNLSSHCIYLTDDY--------------------AAKVAEICFTTIALPKSK---VSDDIENSVLPPLAD 561 (680)
Q Consensus 506 -~~~~~~ivHrDlKp~NILld~~~--------------------~~ki~DFGla~~~~~~~~---~~~~~~~~~~~~~~s 561 (680)
+. +|+||||||+|||++.++ .+||+|||+++....... .....|+...... +
T Consensus 179 ~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~-~ 254 (336)
T 2vuw_A 179 ASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG-D 254 (336)
T ss_dssp HHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS-S
T ss_pred HhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC-c
Confidence 77 999999999999999887 899999999987654321 1112233333223 7
Q ss_pred CCCCeeehhHH-HHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCC
Q 005734 562 PETNIYSFGIL-MLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRP 640 (680)
Q Consensus 562 ~~sDVySfGvv-llElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RP 640 (680)
.++||||++++ .+++++|..||.... ............. .... ............++.+|+.+|++.|
T Consensus 255 ~~~Diwsl~~~~~~~~~~g~~p~~~~~--~~~~~~~~~~~~~-~~~~---~~~~~~~~~~s~~~~dli~~~L~~d----- 323 (336)
T 2vuw_A 255 YQFDIYRLMKKENNNRWGEYHPYSNVL--WLHYLTDKMLKQM-TFKT---KCNTPAMKQIKRKIQEFHRTMLNFS----- 323 (336)
T ss_dssp HHHHHHHHHHHHHTTCTTSCCTHHHHH--HHHHHHHHHHHTC-CCSS---CCCSHHHHHHHHHHHHHHHHGGGSS-----
T ss_pred cceehhhhhCCCCcccccccCCCcchh--hhhHHHHhhhhhh-ccCc---ccchhhhhhcCHHHHHHHHHHhccC-----
Confidence 78999998777 777888999985321 0011111111110 0000 0001122456678999999999976
Q ss_pred CHHHHH
Q 005734 641 TMNDII 646 (680)
Q Consensus 641 tm~ev~ 646 (680)
|++|++
T Consensus 324 sa~e~l 329 (336)
T 2vuw_A 324 SATDLL 329 (336)
T ss_dssp SHHHHH
T ss_pred CHHHHH
Confidence 888887
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.93 E-value=4e-26 Score=238.69 Aligned_cols=156 Identities=28% Similarity=0.479 Sum_probs=145.0
Q ss_pred CchHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCCCc--cceeeeCC----CcEeEEEcCCCCCcc--cCCcccCCCCCCC
Q 005734 27 SLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCL--WSGVRCLN----GKVQMLDMKERSLEG--TLAPDLGKLSDLR 98 (680)
Q Consensus 27 ~~~~~~~~ll~~~~~~~~~~~~~l~~W~~~~~~~c~--w~gv~c~~----~~l~~L~l~~~~l~g--~~p~~~~~l~~L~ 98 (680)
|...|+.||++||+++. +|. .+.+|.. +.+||. |.||.|.. ++|+.|+|++|.++| .+|+.++.+++|+
T Consensus 3 c~~~~~~aL~~~k~~~~-~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLG-NPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp SCHHHHHHHHHHHHHTT-CCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCHHHHHHHHHHHHhcC-Ccc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 45689999999999984 665 7899975 457888 99999974 799999999999999 8999999999999
Q ss_pred EEEccC-ccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCc
Q 005734 99 FLVLQK-NHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 99 ~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N 177 (680)
+|+|++ |.+.+.+|..++++++|++|+|++|++++.+|..+.++++|++|+|++|.+++.+|..++.+++|++|++++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCC
Q 005734 178 LTSAEVAG 185 (680)
Q Consensus 178 ~~~g~~p~ 185 (680)
.++|.+|.
T Consensus 160 ~l~~~~p~ 167 (313)
T 1ogq_A 160 RISGAIPD 167 (313)
T ss_dssp CCEEECCG
T ss_pred cccCcCCH
Confidence 99998886
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.91 E-value=1.6e-25 Score=252.10 Aligned_cols=183 Identities=8% Similarity=0.041 Sum_probs=120.3
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccc-----hhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCce
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSS-----KDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~-----~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 461 (680)
...+.|+.|.+++++. ..|+.++||++..... ........++|.+|+++|+++ .|+||+++++++.+++ +.
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~--~~ 317 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ--SG 317 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS--EE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC--EE
Confidence 4456677776666542 3588899999875421 112234456899999999999 6999999999999887 78
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
||||||++||+|.++|... ..++.. +|+.||+.||+|+|+. +||||||||+|||+++++.+||+|||+|+..
T Consensus 318 yLVMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 318 WLVMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EEEEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EEEEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999999654 356653 5899999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccc--------cccCCCCCCCCCCCCeeehhHHHHHHHhCCCC
Q 005734 542 LPKSKVSDD--------IENSVLPPLADPETNIYSFGILMLEIISGKLP 582 (680)
Q Consensus 542 ~~~~~~~~~--------~~~~~~~~~~s~~sDVySfGvvllElltG~~p 582 (680)
......... .|+.. .+....++|+||.|++++++.++..+
T Consensus 390 ~~~~~~~~t~vGTp~YmAPE~l-~g~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQDCSWPTNLVQSFFVFVNELF-AENKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCCccccCceechhhccHHHh-CCCCCCcccccccccchhhhccccch
Confidence 543222111 12222 23456678999999988877666544
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.91 E-value=2.3e-24 Score=252.65 Aligned_cols=244 Identities=23% Similarity=0.294 Sum_probs=156.9
Q ss_pred hcccCCchHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCCCccceeeeCCCcEeEEEcCCCCCccc---CCc---------
Q 005734 22 LQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGT---LAP--------- 89 (680)
Q Consensus 22 ~~~~~~~~~~~~~ll~~~~~~~~~~~~~l~~W~~~~~~~c~w~gv~c~~~~l~~L~l~~~~l~g~---~p~--------- 89 (680)
++++.+.+.|++||++||+++. ||. .+++|+ .+.+||.|.||+|+.++|+.|+|+++.+.|. +|+
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~-~~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~ 80 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLP-DKN-LLPDWS-SNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLE 80 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCS-CTT-SSTTCC-TTSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCC
T ss_pred CccccCCHHHHHHHHHHHhhCC-Ccc-cccCCC-CCCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCccc
Confidence 3444556789999999999986 777 899997 3568999999999989999999999999987 554
Q ss_pred --------------ccCCCCCCCEEEccCccCcccCCc--ccCCCCCCCEEEccCCcCCccCcccc-CCCCCCcEEEccC
Q 005734 90 --------------DLGKLSDLRFLVLQKNHFSGVIPK--ELGELTKLELLDLSNNKLSGIIPVEI-SRLPSLKRLLLGN 152 (680)
Q Consensus 90 --------------~~~~l~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~L~~ 152 (680)
.++.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++
T Consensus 81 ~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 160 (768)
T 3rgz_A 81 SLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160 (768)
T ss_dssp EEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCS
T ss_pred ccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCC
Confidence 566666777777777777766666 67777777777777777776666655 6677777777777
Q ss_pred CcccccCChh---hcCCCCCCeeeccCcccccccCCcccc--------ccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 153 NKFEGSIPLE---LSRFTLLSELQFDDYLTSAEVAGIRSV--------NRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 153 N~l~g~~P~~---l~~l~~L~~L~l~~N~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
|.+++..|.. ++++++|++|++++|.+++.+|..... .+.+......+..+..++.++++.|++++.+|
T Consensus 161 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~ 240 (768)
T 3rgz_A 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFS 240 (768)
T ss_dssp SCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHH
T ss_pred CccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCccc
Confidence 7777666655 566777777777777766655531100 01111112235666677777777777777766
Q ss_pred hhhhhhhhhhhhHHhhhhhhcccccCCCCCCCCCCCccccccCCCCCCCCCCC
Q 005734 222 THLVQHSQNLINVARRKLLEQSSNLAAEPATVGSSSDQVIALPTSRSSGTFPA 274 (680)
Q Consensus 222 ~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~ 274 (680)
..+.+ +.+++ .+.++.|++.+..+......++..++..+..+|.+|.
T Consensus 241 ~~l~~----l~~L~--~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~ 287 (768)
T 3rgz_A 241 RAIST----CTELK--LLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPD 287 (768)
T ss_dssp HHTTT----CSSCC--EEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCC
T ss_pred HHHhc----CCCCC--EEECCCCcccCccCccccCCCCEEECcCCccCCccCH
Confidence 65542 11222 2334455554433322222344455555555555544
No 254
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=3.3e-23 Score=242.59 Aligned_cols=152 Identities=24% Similarity=0.281 Sum_probs=137.7
Q ss_pred chHHHHHHHHHHHhCcCCCCCCCCCCCCCC----CCC--Ccc------------ceeeeC-CCcEeEEEcCCCCCcccCC
Q 005734 28 LNLEGMALLEFRTRVISDPFGVFSNWNKND----STP--CLW------------SGVRCL-NGKVQMLDMKERSLEGTLA 88 (680)
Q Consensus 28 ~~~~~~~ll~~~~~~~~~~~~~l~~W~~~~----~~~--c~w------------~gv~c~-~~~l~~L~l~~~~l~g~~p 88 (680)
...|+.||++||+++. +| +|+.++ .+| |.| .||.|+ .++|+.|+|+++++.|.+|
T Consensus 267 ~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 267 YIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp HHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEEC
T ss_pred chHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCc
Confidence 4578999999999984 44 787554 355 999 999998 5899999999999999999
Q ss_pred cccCCCCCCCEEEc-cCccCccc---------------------------------------------------------
Q 005734 89 PDLGKLSDLRFLVL-QKNHFSGV--------------------------------------------------------- 110 (680)
Q Consensus 89 ~~~~~l~~L~~L~L-~~N~l~g~--------------------------------------------------------- 110 (680)
+++++|++|++|+| ++|.++|.
T Consensus 341 ~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 341 DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 99999999999999 77766555
Q ss_pred -------------------CCcccCCCCCCCEEEccCCcCCc-----------------cCccccC--CCCCCcEEEccC
Q 005734 111 -------------------IPKELGELTKLELLDLSNNKLSG-----------------IIPVEIS--RLPSLKRLLLGN 152 (680)
Q Consensus 111 -------------------~p~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~--~l~~L~~L~L~~ 152 (680)
+|..++++++|++|+|++|+|+| .+|..++ ++++|++|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 88899999999999999999998 4999988 999999999999
Q ss_pred CcccccCChhhcCCCCCCeeeccCcc-ccc-ccCC
Q 005734 153 NKFEGSIPLELSRFTLLSELQFDDYL-TSA-EVAG 185 (680)
Q Consensus 153 N~l~g~~P~~l~~l~~L~~L~l~~N~-~~g-~~p~ 185 (680)
|.+.|.+|..++++++|+.|+|++|. ++| .+|.
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~ 535 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKA 535 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHH
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchH
Confidence 99999999999999999999999998 998 7876
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.88 E-value=5.1e-23 Score=235.96 Aligned_cols=194 Identities=17% Similarity=0.208 Sum_probs=164.0
Q ss_pred hHHHHHHHHHHHhCcCCCCCC-------CCCCCCCCCCCCcc---ceeeeC-CCcEeEEEcCCCCCcccCCcccCCCCCC
Q 005734 29 NLEGMALLEFRTRVISDPFGV-------FSNWNKNDSTPCLW---SGVRCL-NGKVQMLDMKERSLEGTLAPDLGKLSDL 97 (680)
Q Consensus 29 ~~~~~~ll~~~~~~~~~~~~~-------l~~W~~~~~~~c~w---~gv~c~-~~~l~~L~l~~~~l~g~~p~~~~~l~~L 97 (680)
..|+.||.+++.++.++.+.. ..+|+. +.+||.| .||+|+ .++|+.|+|+++++.|.+|+++++|++|
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccc
Confidence 368899999999986554442 338985 4689999 999996 5799999999999999999999999999
Q ss_pred CEEEccCc------------------------------------------------------------------------
Q 005734 98 RFLVLQKN------------------------------------------------------------------------ 105 (680)
Q Consensus 98 ~~L~L~~N------------------------------------------------------------------------ 105 (680)
++|+|++|
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~ 187 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQ 187 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTT
T ss_pred eEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhh
Confidence 99999988
Q ss_pred ------cCcccCCcccCCCCCCCEEEccCCcCCcc-----------------CccccC--CCCCCcEEEccCCcccccCC
Q 005734 106 ------HFSGVIPKELGELTKLELLDLSNNKLSGI-----------------IPVEIS--RLPSLKRLLLGNNKFEGSIP 160 (680)
Q Consensus 106 ------~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~L~~L~L~~N~l~g~~P 160 (680)
+|+| +|..++++++|++|+|++|.++|. +|..++ ++++|++|+|++|.+.|.+|
T Consensus 188 l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p 266 (636)
T 4eco_A 188 IGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLP 266 (636)
T ss_dssp TTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCC
T ss_pred hccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccCh
Confidence 4456 899999999999999999999986 999999 99999999999999999999
Q ss_pred hhhcCCCCCCeeeccCcc-ccc-ccCCcccc----------------ccccCCccc--ccCCCCCCcccCCCCCCCCCCc
Q 005734 161 LELSRFTLLSELQFDDYL-TSA-EVAGIRSV----------------NRKFGQYGF--KIGEDSLHTNGDHSCANLPGSS 220 (680)
Q Consensus 161 ~~l~~l~~L~~L~l~~N~-~~g-~~p~~~~~----------------~~~~~~~~~--~~~~~~~~~~l~~s~n~l~~~~ 220 (680)
..++++++|++|++++|. ++| .+|..... .+.+..++. .+..+..++.++++.|+++|.+
T Consensus 267 ~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~i 346 (636)
T 4eco_A 267 TFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKL 346 (636)
T ss_dssp TTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEEC
T ss_pred HHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccch
Confidence 999999999999999998 998 77753211 122333344 5777888888999999998888
Q ss_pred chhhh
Q 005734 221 ETHLV 225 (680)
Q Consensus 221 ~~~~~ 225 (680)
| .+.
T Consensus 347 p-~~~ 350 (636)
T 4eco_A 347 P-AFG 350 (636)
T ss_dssp C-CCE
T ss_pred h-hhC
Confidence 7 544
No 256
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.87 E-value=4.3e-23 Score=231.08 Aligned_cols=179 Identities=8% Similarity=0.111 Sum_probs=132.5
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchh---hHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKD---WLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
.++||+|+||.||+|+. .+..+++|+...+.... ......+.|.+|++++++++||||+++..++...+ ..++|
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~lV 417 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD--NKRIM 417 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--TTEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--ccEEE
Confidence 37899999999999955 46788998765443221 11223567999999999999999997777777666 56999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||+++|+|.+++.. +.+|+.|+++||+|||+. +|+||||||+|||+++ .+||+|||+++.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999964 568999999999999998 9999999999999999 9999999999987542
Q ss_pred CCcc----------cccccCCCCC-------CCCCCCCeeehhHHHHHHHhCCCCCC
Q 005734 545 SKVS----------DDIENSVLPP-------LADPETNIYSFGILMLEIISGKLPYC 584 (680)
Q Consensus 545 ~~~~----------~~~~~~~~~~-------~~s~~sDVySfGvvllElltG~~p~~ 584 (680)
.... ...+.+..|+ .++..+|+||..+-.+|-+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 1111 0112222222 23556789999888888888877764
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.87 E-value=6.7e-23 Score=215.58 Aligned_cols=198 Identities=16% Similarity=0.159 Sum_probs=156.5
Q ss_pred ccCCchHHHHHHHHHHHhCcCCCCCCCCCCC---CCCCCCCccceeeeC----------CCcEeEEEcCCCCCcccCCcc
Q 005734 24 GCWSLNLEGMALLEFRTRVISDPFGVFSNWN---KNDSTPCLWSGVRCL----------NGKVQMLDMKERSLEGTLAPD 90 (680)
Q Consensus 24 ~~~~~~~~~~~ll~~~~~~~~~~~~~l~~W~---~~~~~~c~w~gv~c~----------~~~l~~L~l~~~~l~g~~p~~ 90 (680)
.+....+|+.+|++||..+..++.+.+.+|. ....++|.|.|+.|. ..+|+.|+|++|.++ .+|+.
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 3445678999999999988667777778894 345678999999994 378999999999998 88999
Q ss_pred cCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcC-----
Q 005734 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSR----- 165 (680)
Q Consensus 91 ~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~----- 165 (680)
++.+++|++|+|++|.|+ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..++.
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 999999999999999999 89999999999999999999999 89999999999999999999999999988765
Q ss_pred ----CCCCCeeeccCcccccccCCccccc----------cccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 166 ----FTLLSELQFDDYLTSAEVAGIRSVN----------RKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 166 ----l~~L~~L~l~~N~~~g~~p~~~~~~----------~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
+++|++|++++|.++ .+|...... +.+..++..+..+..++.++++.|++.+.+|..+.
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~ 250 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFG 250 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTT
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhc
Confidence 999999999999998 666521110 11222223344445555555555555555554443
No 258
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.82 E-value=3.2e-20 Score=190.52 Aligned_cols=134 Identities=7% Similarity=0.088 Sum_probs=109.2
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchh-------------hHHHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKD-------------WLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~-------------~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
+.||+|+||.||+|...+|+.||||.+....... |.......+.+|++++++++ | +++.+++..
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~ 172 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW 172 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence 8999999999999999889999999986432110 11124567999999999999 5 777776654
Q ss_pred CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 456 ~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
+ ..++||||+++|+|.+ +.. .....++.++++||+|||+. +|+||||||+|||++ ++.+||+||
T Consensus 173 ~---~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DF 236 (282)
T 1zar_A 173 E---GNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDF 236 (282)
T ss_dssp E---TTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCC
T ss_pred c---ceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEEC
Confidence 3 4599999999999998 521 12457999999999999998 999999999999999 999999999
Q ss_pred cccccc
Q 005734 536 CFTTIA 541 (680)
Q Consensus 536 Gla~~~ 541 (680)
|+++..
T Consensus 237 G~a~~~ 242 (282)
T 1zar_A 237 PQSVEV 242 (282)
T ss_dssp TTCEET
T ss_pred CCCeEC
Confidence 999764
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.76 E-value=1.2e-18 Score=204.10 Aligned_cols=115 Identities=36% Similarity=0.508 Sum_probs=90.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+.+.+|..++.+++|++|+|++|.++|.+|..+.++++|++|+|++|+++|.+|..++.+++|++|+|
T Consensus 442 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 521 (768)
T 3rgz_A 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL 521 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEEC
Confidence 45667777777777777777777777777777777777777777777888888888888888778888888888888888
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCC
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
++|+++|.+|..++++++|+.|++++|.++|.+|.
T Consensus 522 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~ 556 (768)
T 3rgz_A 522 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556 (768)
T ss_dssp CSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCG
T ss_pred CCCcccCcCCHHHcCCCCCCEEECCCCccCCcCCh
Confidence 88888888888888888888888888888887775
No 260
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.9e-18 Score=175.04 Aligned_cols=138 Identities=15% Similarity=0.120 Sum_probs=104.5
Q ss_pred ccccCCCCCCeEEEEEe-CCCCE--EEEEEeeeccchhh-------------------HHHHHHHHHHHHHHHHcCCCCc
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVE--IAVAATAITSSKDW-------------------LKSQEMAYRKQVDTLSRINHKN 445 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~--vaVK~~~~~~~~~~-------------------~~~~~~~f~~E~~~l~~l~H~n 445 (680)
.+.||+|+||.||+|.. .+|+. ||||+......... .......+.+|++.+.+++|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 47899999999999998 78989 99998654321100 1122346889999999998886
Q ss_pred c--cceeeEEecCCCCceEEEEEecCC-C----ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCeeecCC
Q 005734 446 F--VNLIGYCEDDEPFNRMMVFEYAPN-G----TVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMH-HELNPPVAHSNL 517 (680)
Q Consensus 446 i--v~l~g~~~~~~~~~~~lV~ey~~~-G----sL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH-~~~~~~ivHrDl 517 (680)
+ ...+++ . ..+|||||+.+ | +|.++... .++.....++.+++.||+||| +. +|+||||
T Consensus 132 i~~p~~~~~--~----~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHrDl 197 (258)
T 1zth_A 132 VSVPQPYTY--M----KNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHADL 197 (258)
T ss_dssp CCCCCEEEE--E----TTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSC
T ss_pred CCCCeEEEc--C----CCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCC
Confidence 5 333332 2 34899999942 4 66665432 234467889999999999999 77 9999999
Q ss_pred CCCCeeecCCCCeEEccccccccc
Q 005734 518 SSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 518 Kp~NILld~~~~~ki~DFGla~~~ 541 (680)
||+|||+++ .++|+|||+|...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 9999999999765
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=2.1e-17 Score=164.27 Aligned_cols=150 Identities=23% Similarity=0.286 Sum_probs=131.6
Q ss_pred CCCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEc
Q 005734 58 STPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDL 126 (680)
Q Consensus 58 ~~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 126 (680)
.+.|.|++|.|.. .+++.|+|++|.+++..|..|..+++|++|+|++|.|++..+..|..+++|++|+|
T Consensus 16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 4689999999963 36899999999999988999999999999999999998666677899999999999
Q ss_pred cCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCC
Q 005734 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLH 206 (680)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 206 (680)
++|++++..+..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|.+++..+. .+..+..+
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L 161 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG-------------AFDRLSSL 161 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT-------------TTTTCTTC
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH-------------HHhCCCCC
Confidence 999999766667899999999999999999 7999999999999999999999864433 35566778
Q ss_pred cccCCCCCCCCCCcc
Q 005734 207 TNGDHSCANLPGSSE 221 (680)
Q Consensus 207 ~~l~~s~n~l~~~~~ 221 (680)
..++++.|.+....+
T Consensus 162 ~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 162 THAYLFGNPWDCECR 176 (229)
T ss_dssp CEEECTTSCBCTTBG
T ss_pred CEEEeeCCCccCCcc
Confidence 889999999987654
No 262
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.73 E-value=1.2e-17 Score=168.37 Aligned_cols=141 Identities=22% Similarity=0.271 Sum_probs=99.1
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
.++.|+|++|.+++..+..+..+++|++|+|++|.|++..|..|..+++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 46777777777777666677777777777777777777666667777777777777777776555666777777777777
Q ss_pred CCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
+|.+++..+..+..+++|++|+|++|.+++..+. .|..+..++.++++.|++++..+..+.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-------------~~~~l~~L~~L~L~~N~l~~~~~~~~~ 176 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAG-------------AFDKLTNLQTLSLSTNQLQSVPHGAFD 176 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-------------TTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHH-------------HcCcCcCCCEEECCCCcCCccCHHHHh
Confidence 7777755555567777777777777777654332 344555666777777777766654443
No 263
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.72 E-value=6.4e-17 Score=158.09 Aligned_cols=150 Identities=20% Similarity=0.223 Sum_probs=128.0
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEcc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS 127 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 127 (680)
+.|.|++|.|.. .+++.|++++|.+++..+..+..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 5 C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 5 CSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECC
Confidence 568999999963 368999999999997766678999999999999999997666778999999999999
Q ss_pred CCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCc
Q 005734 128 NNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHT 207 (680)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 207 (680)
+|++++..+..+..+++|++|+|++|++++..+..+..+++|++|++++|.+++..+. .+..+..++
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-------------~~~~l~~L~ 151 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG-------------VFDRLTSLQ 151 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT-------------TTTTCTTCC
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH-------------HhccCCCcc
Confidence 9999976666689999999999999999976666789999999999999999864443 345567788
Q ss_pred ccCCCCCCCCCCcc
Q 005734 208 NGDHSCANLPGSSE 221 (680)
Q Consensus 208 ~l~~s~n~l~~~~~ 221 (680)
.++++.|.+.+..|
T Consensus 152 ~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 152 YIWLHDNPWDCTCP 165 (208)
T ss_dssp EEECCSCCBCCCTT
T ss_pred EEEecCCCeecCCC
Confidence 89999998887654
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.71 E-value=5.4e-17 Score=160.23 Aligned_cols=150 Identities=16% Similarity=0.152 Sum_probs=131.7
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCc-ccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAP-DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDL 126 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 126 (680)
+-|.|+.+.|.. ..++.|+|++|.+++..+. .|..+++|++|+|++|.|++..|..|..+++|++|+|
T Consensus 9 C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 88 (220)
T 2v70_A 9 CRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 88 (220)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEEC
Confidence 447899999863 2578999999999987664 5789999999999999999888889999999999999
Q ss_pred cCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCC
Q 005734 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLH 206 (680)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 206 (680)
++|++++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|. .|..+..+
T Consensus 89 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L 155 (220)
T 2v70_A 89 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG-------------AFDTLHSL 155 (220)
T ss_dssp CSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT-------------TTTTCTTC
T ss_pred CCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH-------------HhcCCCCC
Confidence 99999988888899999999999999999998899999999999999999999987665 35566778
Q ss_pred cccCCCCCCCCCCcc
Q 005734 207 TNGDHSCANLPGSSE 221 (680)
Q Consensus 207 ~~l~~s~n~l~~~~~ 221 (680)
+.++++.|.+.+..+
T Consensus 156 ~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 156 STLNLLANPFNCNCY 170 (220)
T ss_dssp CEEECCSCCEECSGG
T ss_pred CEEEecCcCCcCCCc
Confidence 889999999987654
No 265
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.71 E-value=1.3e-16 Score=162.51 Aligned_cols=147 Identities=23% Similarity=0.265 Sum_probs=84.7
Q ss_pred CCCccceeeeC-CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCcc
Q 005734 59 TPCLWSGVRCL-NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPV 137 (680)
Q Consensus 59 ~~c~w~gv~c~-~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 137 (680)
+.|.|.|+.|. .+.++.+++++++++ .+|..+. +.|+.|+|++|.+++..+..|.++++|++|+|++|+++...+.
T Consensus 3 ~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~ 79 (270)
T 2o6q_A 3 ALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG 79 (270)
T ss_dssp CCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT
T ss_pred ccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh
Confidence 56788877775 234556666666666 3454433 4566666666666655445666666666666666666633333
Q ss_pred ccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC
Q 005734 138 EISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 138 ~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
.+..+++|++|+|++|.+++..+..+..+++|++|++++|.+++..+. .|..+..++.++++.|+++
T Consensus 80 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~Ls~n~l~ 146 (270)
T 2o6q_A 80 IFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPR-------------VFDSLTKLTYLSLGYNELQ 146 (270)
T ss_dssp TTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTT-------------TTTTCTTCCEEECCSSCCC
T ss_pred hhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHH-------------HhCcCcCCCEEECCCCcCC
Confidence 445666666666666666654444556666666666666666544332 2333444555555555555
Q ss_pred CCcc
Q 005734 218 GSSE 221 (680)
Q Consensus 218 ~~~~ 221 (680)
+..+
T Consensus 147 ~~~~ 150 (270)
T 2o6q_A 147 SLPK 150 (270)
T ss_dssp CCCT
T ss_pred ccCH
Confidence 4433
No 266
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.70 E-value=7.5e-17 Score=159.17 Aligned_cols=147 Identities=18% Similarity=0.175 Sum_probs=128.5
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEcc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS 127 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 127 (680)
+.|.|..+.|.. .+++.|+|++|.+++..+..|..+++|++|+|++|.|++..|..|.++++|++|+|+
T Consensus 9 C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls 88 (220)
T 2v9t_B 9 CTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 88 (220)
T ss_dssp SEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECC
T ss_pred CEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECC
Confidence 457899999963 368999999999998877789999999999999999999889999999999999999
Q ss_pred CCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCc
Q 005734 128 NNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHT 207 (680)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 207 (680)
+|++++..+..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..+. .|..+..++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~ 155 (220)
T 2v9t_B 89 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG-------------TFSPLRAIQ 155 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT-------------TTTTCTTCC
T ss_pred CCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH-------------HHhCCCCCC
Confidence 9999955555578999999999999999988889999999999999999999876554 345566778
Q ss_pred ccCCCCCCCCC
Q 005734 208 NGDHSCANLPG 218 (680)
Q Consensus 208 ~l~~s~n~l~~ 218 (680)
.++++.|.+..
T Consensus 156 ~L~L~~N~~~c 166 (220)
T 2v9t_B 156 TMHLAQNPFIC 166 (220)
T ss_dssp EEECCSSCEEC
T ss_pred EEEeCCCCcCC
Confidence 89999998865
No 267
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.70 E-value=1.4e-17 Score=173.79 Aligned_cols=199 Identities=21% Similarity=0.297 Sum_probs=155.9
Q ss_pred CCcEeEEEcCC-CCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 70 NGKVQMLDMKE-RSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 70 ~~~l~~L~l~~-~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
..+++.|+|++ |.+.+.+|..++.+++|++|+|++|.+++.+|..+.++++|++|+|++|.+++.+|..+..+++|++|
T Consensus 75 l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 154 (313)
T 1ogq_A 75 LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI 154 (313)
T ss_dssp CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEE
T ss_pred CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeE
Confidence 35799999995 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCcccccCChhhcCCC-CCCeeeccCcccccccCCcccccc---------cc-CCcccccCCCCCCcccCCCCCCCC
Q 005734 149 LLGNNKFEGSIPLELSRFT-LLSELQFDDYLTSAEVAGIRSVNR---------KF-GQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 149 ~L~~N~l~g~~P~~l~~l~-~L~~L~l~~N~~~g~~p~~~~~~~---------~~-~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
+|++|.++|.+|..++.++ +|++|++++|.+++.+|....... .+ +..+..+..+..++.++++.|+++
T Consensus 155 ~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 234 (313)
T 1ogq_A 155 TFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234 (313)
T ss_dssp ECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEEC
T ss_pred ECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCcee
Confidence 9999999999999999998 999999999999998886432211 11 112245667777888888888888
Q ss_pred CCcchhhhhhhhhhhhHHhhhhhhcccccCCCCCC-CC-CCCccccccCCCCCCCCCCCC
Q 005734 218 GSSETHLVQHSQNLINVARRKLLEQSSNLAAEPAT-VG-SSSDQVIALPTSRSSGTFPAI 275 (680)
Q Consensus 218 ~~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~-~~-~~~~~~~~~~~~~~~g~~p~~ 275 (680)
+.+|. +. .+.++. .+.++.|++.+..+. .. ...++..++..|..+|.+|..
T Consensus 235 ~~~~~-~~----~l~~L~--~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 235 FDLGK-VG----LSKNLN--GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp CBGGG-CC----CCTTCC--EEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred eecCc-cc----ccCCCC--EEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 76665 22 112222 344566777643322 21 123566777788788877764
No 268
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.66 E-value=8.6e-16 Score=156.95 Aligned_cols=182 Identities=16% Similarity=0.113 Sum_probs=142.9
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..+..+++|++|+|++|++++..|..+..+++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 36899999999999887778999999999999999999887889999999999999999999888889999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc-ccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA-EVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQ 229 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~ 229 (680)
++|.+++..+..++.+++|++|++++|.+++ .+|. .+..+..++.++++.|++++..+..+.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~-------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~---- 170 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE-------------YFSNLTNLEHLDLSSNKIQSIYCTDLR---- 170 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG-------------GGGGCTTCCEEECCSSCCCEECGGGGH----
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCch-------------hhccCCCCCEEECCCCCCCcCCHHHhh----
Confidence 9999998767689999999999999999876 3454 455667888899999999987766554
Q ss_pred hhhhHHhh--hhhhcccccCCCCCCC-CCCCccccccCCCCCC
Q 005734 230 NLINVARR--KLLEQSSNLAAEPATV-GSSSDQVIALPTSRSS 269 (680)
Q Consensus 230 ~~~~l~~~--~l~~~~n~l~~~~~~~-~~~~~~~~~~~~~~~~ 269 (680)
.+.++..+ .+.++.|++...+... ....++..++..|..+
T Consensus 171 ~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~ 213 (276)
T 2z62_A 171 VLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLK 213 (276)
T ss_dssp HHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCS
T ss_pred hhhhccccceeeecCCCcccccCccccCCCcccEEECCCCcee
Confidence 22233322 3445666665443221 1113445556666544
No 269
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=4.2e-16 Score=150.35 Aligned_cols=132 Identities=21% Similarity=0.273 Sum_probs=94.8
Q ss_pred EEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCc-ccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCC
Q 005734 75 MLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPK-ELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153 (680)
Q Consensus 75 ~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 153 (680)
.+++++|+++ .+|..+.. +|++|+|++|.|++..|. .+..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 3455566663 55655543 778888888888765554 3777888888888888888777777888888888888888
Q ss_pred cccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcch
Q 005734 154 KFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSET 222 (680)
Q Consensus 154 ~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~ 222 (680)
++++..|..|.++++|++|+|++|.+++.+|. .+..+..+..++++.|++.+..+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPG-------------SFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTT-------------SSTTCTTCCEEECTTCCBCCSGGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHH-------------HhhcCCCCCEEEeCCCCccCcCcc
Confidence 88877777777788888888888887776664 344556667777888888776654
No 270
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.65 E-value=4.8e-16 Score=158.61 Aligned_cols=141 Identities=19% Similarity=0.213 Sum_probs=116.3
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+.+. +.+..+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 46789999999998863 4788999999999999999987777788999999999999999977777788999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
|++|.+++..|..++.+++|+.|++++|.+++..+. .+..+..++.++++.|++++..+..+.
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~L~~N~l~~~~~~~~~ 202 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEG-------------VFDKLTQLKDLRLYQNQLKSVPDGVFD 202 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-------------TTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHH-------------HhcCCccCCEEECCCCcCCccCHHHHh
Confidence 999999976666788999999999999988865443 345566778888888888887765544
No 271
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.64 E-value=1.8e-16 Score=183.65 Aligned_cols=201 Identities=15% Similarity=0.092 Sum_probs=128.3
Q ss_pred chHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCCCccceeeeCCCcEeEEEcCC------------------CCCcc----
Q 005734 28 LNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQMLDMKE------------------RSLEG---- 85 (680)
Q Consensus 28 ~~~~~~~ll~~~~~~~~~~~~~l~~W~~~~~~~c~w~gv~c~~~~l~~L~l~~------------------~~l~g---- 85 (680)
.+.++.+|+++........+..-..|.......+.|.++.+..++++.|+|.. |.+.+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~ 209 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDI 209 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcccc
Confidence 45667889988876643334444567554445678988877665555555543 33332
Q ss_pred -----cCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCC
Q 005734 86 -----TLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIP 160 (680)
Q Consensus 86 -----~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P 160 (680)
..+..+..++.|+.|+|++|.|. .+|..+..+++|++|+|++|.|+ .+|..|+.|++|++|+|++|.|+ .+|
T Consensus 210 ~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp 286 (727)
T 4b8c_D 210 ENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLP 286 (727)
T ss_dssp ------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCC
T ss_pred ccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccC
Confidence 23556788999999999999998 78888889999999999999999 89999999999999999999999 889
Q ss_pred hhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhhhhhhHHhhhhh
Q 005734 161 LELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRKLL 240 (680)
Q Consensus 161 ~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~~~~l~~~~l~ 240 (680)
..|++|++|++|+|++|.++ .+|. .|+.+.++..|+++.|+|++.+|..+... .+..+.+.
T Consensus 287 ~~~~~l~~L~~L~L~~N~l~-~lp~-------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-----~~~~~~l~ 347 (727)
T 4b8c_D 287 AELGSCFQLKYFYFFDNMVT-TLPW-------------EFGNLCNLQFLGVEGNPLEKQFLKILTEK-----SVTGLIFY 347 (727)
T ss_dssp SSGGGGTTCSEEECCSSCCC-CCCS-------------STTSCTTCCCEECTTSCCCSHHHHHHHHH-----HHHHHHHH
T ss_pred hhhcCCCCCCEEECCCCCCC-ccCh-------------hhhcCCCccEEeCCCCccCCCChHHHhhc-----chhhhHHh
Confidence 99999999999999999886 5665 46677888999999999999998877622 12222344
Q ss_pred hcccccCCCC
Q 005734 241 EQSSNLAAEP 250 (680)
Q Consensus 241 ~~~n~l~~~~ 250 (680)
+..|++.+..
T Consensus 348 l~~N~l~~~~ 357 (727)
T 4b8c_D 348 LRDNRPEIPL 357 (727)
T ss_dssp HHHCCCCCCC
T ss_pred hccCcccCcC
Confidence 5667766544
No 272
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.63 E-value=5e-16 Score=162.97 Aligned_cols=152 Identities=16% Similarity=0.194 Sum_probs=117.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCC---------
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISR--------- 141 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~--------- 141 (680)
.+++.|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..++++++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 57888888888888 78888888888888888888888 77888888888888888888888888877654
Q ss_pred CCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCcccc----------ccccCCcccccCCCCCCcccCC
Q 005734 142 LPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSV----------NRKFGQYGFKIGEDSLHTNGDH 211 (680)
Q Consensus 142 l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~----------~~~~~~~~~~~~~~~~~~~l~~ 211 (680)
+++|++|+|++|.++ .+|..++++++|++|++++|.+++..+..... +...+..+..+..+..++.+++
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 888888888888888 78888888888888888888887643322111 1112223346777888899999
Q ss_pred CCCCCCCCcchhhh
Q 005734 212 SCANLPGSSETHLV 225 (680)
Q Consensus 212 s~n~l~~~~~~~~~ 225 (680)
+.|++.+.+|..+.
T Consensus 261 ~~n~~~~~~p~~~~ 274 (328)
T 4fcg_A 261 KDCSNLLTLPLDIH 274 (328)
T ss_dssp TTCTTCCBCCTTGG
T ss_pred CCCCchhhcchhhh
Confidence 99999999987765
No 273
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.63 E-value=1.3e-15 Score=162.00 Aligned_cols=157 Identities=22% Similarity=0.189 Sum_probs=131.9
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccC-CCCCCCEEEccCccCcccCCcccCCCCCCCEEEc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLG-KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDL 126 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 126 (680)
+.|.+..+.|.. ..++.|+|++|.+++..+..+. .+++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 16 C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 16 CLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp CEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEEC
Confidence 347888899953 3578999999999988777787 9999999999999999888889999999999999
Q ss_pred cCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCC
Q 005734 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLH 206 (680)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 206 (680)
++|+|++..+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|.+++..+.. + ..+..+..+
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~------~----~~~~~l~~L 165 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVEL------I----KDGNKLPKL 165 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGG------T----C----CTTC
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHH------h----cCcccCCcC
Confidence 999999777778999999999999999999888999999999999999999998632221 0 112456778
Q ss_pred cccCCCCCCCCCCcchhhh
Q 005734 207 TNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 207 ~~l~~s~n~l~~~~~~~~~ 225 (680)
..++++.|+|++..+..+.
T Consensus 166 ~~L~L~~N~l~~l~~~~~~ 184 (361)
T 2xot_A 166 MLLDLSSNKLKKLPLTDLQ 184 (361)
T ss_dssp CEEECCSSCCCCCCHHHHH
T ss_pred CEEECCCCCCCccCHHHhh
Confidence 8899999999987765554
No 274
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.63 E-value=1.1e-15 Score=174.72 Aligned_cols=142 Identities=17% Similarity=0.158 Sum_probs=125.4
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.|||++|.|++..+.+|.++++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..|..|.+|++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36899999999999887889999999999999999999888889999999999999999999777778999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc-ccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA-EVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++|++++..+..|+++++|++|++++|.+++ .+|. .+..+..++.++++.|++++..+..+.
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~-------------~~~~l~~L~~L~L~~N~l~~~~~~~l~ 194 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE-------------YFSNLTNLEHLDLSSNKIQSIYCTDLR 194 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG-------------GGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCch-------------hhccchhhhhhcccCcccccccccccc
Confidence 9999997666779999999999999999875 3343 345567788899999999988877665
No 275
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.63 E-value=5e-16 Score=170.46 Aligned_cols=154 Identities=20% Similarity=0.253 Sum_probs=134.1
Q ss_pred CCccce--eeeCC----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccC-CcccCCCCCCCEEEc
Q 005734 60 PCLWSG--VRCLN----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVI-PKELGELTKLELLDL 126 (680)
Q Consensus 60 ~c~w~g--v~c~~----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~L 126 (680)
.|.|.+ |.|.. .++++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|
T Consensus 7 ~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~L 86 (455)
T 3v47_A 7 ECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKL 86 (455)
T ss_dssp CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEEC
T ss_pred eeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeC
Confidence 355444 88863 46899999999999988999999999999999999998766 567999999999999
Q ss_pred cCCcCCccCccccCCCCCCcEEEccCCcccccCChh--hcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCC
Q 005734 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLE--LSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDS 204 (680)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~--l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~ 204 (680)
++|++++..|..++++++|++|+|++|.+++.+|.. ++.+++|++|++++|.+++..|.. .+..+.
T Consensus 87 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~------------~~~~l~ 154 (455)
T 3v47_A 87 DYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS------------FFLNMR 154 (455)
T ss_dssp TTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCG------------GGGGCT
T ss_pred CCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccc------------ccCCCC
Confidence 999999888999999999999999999999877765 999999999999999999876651 245667
Q ss_pred CCcccCCCCCCCCCCcchhhh
Q 005734 205 LHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 205 ~~~~l~~s~n~l~~~~~~~~~ 225 (680)
.++.++++.|++++..+..+.
T Consensus 155 ~L~~L~L~~n~l~~~~~~~l~ 175 (455)
T 3v47_A 155 RFHVLDLTFNKVKSICEEDLL 175 (455)
T ss_dssp TCCEEECTTCCBSCCCTTTSG
T ss_pred cccEEeCCCCcccccChhhhh
Confidence 788899999999998887665
No 276
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.62 E-value=1.2e-15 Score=158.20 Aligned_cols=207 Identities=20% Similarity=0.122 Sum_probs=144.6
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcc--cCCcccCCCCCCCEEE
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSG--VIPKELGELTKLELLD 125 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~ 125 (680)
+.|.|+++.|.. .+++.|+|++|.++...+..+..+++|++|+|++|.++. ..|..+..+++|++|+
T Consensus 5 C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 5 CSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 558999999963 368999999999985444457999999999999999983 3467777899999999
Q ss_pred ccCCcCCccCccccCCCCCCcEEEccCCcccccCC-hhhcCCCCCCeeeccCcccccccCCccccc----------cccC
Q 005734 126 LSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIP-LELSRFTLLSELQFDDYLTSAEVAGIRSVN----------RKFG 194 (680)
Q Consensus 126 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P-~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~----------~~~~ 194 (680)
|++|.++ .+|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+++..|...... +.+.
T Consensus 85 Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp CCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred CCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 9999998 578888899999999999999986544 578889999999999998887666522111 1111
Q ss_pred C--cccccCCCCCCcccCCCCCCCCCCcchhhhhhhhhhhhHHhhhhhhcccccCCCCCC-CC-CCCccccccCCCCCCC
Q 005734 195 Q--YGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRKLLEQSSNLAAEPAT-VG-SSSDQVIALPTSRSSG 270 (680)
Q Consensus 195 ~--~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~-~~-~~~~~~~~~~~~~~~g 270 (680)
. .+..+..+..++.++++.|++++..|..+. .+.++. .+.+++|++...+.. .. ...++..+++.|..++
T Consensus 164 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~----~l~~L~--~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 237 (306)
T 2z66_A 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN----SLSSLQ--VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 237 (306)
T ss_dssp GGEECSCCTTCTTCCEEECTTSCCCEECTTTTT----TCTTCC--EEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCB
T ss_pred cccchhHHhhCcCCCEEECCCCCcCCcCHHHhc----CCCCCC--EEECCCCccCccChhhccCcccCCEeECCCCCCcc
Confidence 1 223556667778888888888876665554 122222 334456666544321 11 1234455566665554
Q ss_pred CC
Q 005734 271 TF 272 (680)
Q Consensus 271 ~~ 272 (680)
..
T Consensus 238 ~~ 239 (306)
T 2z66_A 238 SK 239 (306)
T ss_dssp CS
T ss_pred cC
Confidence 43
No 277
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.62 E-value=2.4e-15 Score=154.46 Aligned_cols=142 Identities=19% Similarity=0.153 Sum_probs=120.3
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCc-CCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK-LSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+..+++|++|+|++|. ++...|..+..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 478999999999998777889999999999999999998889999999999999999997 7766688899999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
+++|.+++..|..+.++++|++|++++|.+++..+. .+..+..++.++++.|++++..+..+.
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~l~~n~l~~~~~~~~~ 174 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD-------------TFRDLGNLTHLFLHGNRISSVPERAFR 174 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-------------TTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHh-------------HhccCCCccEEECCCCcccccCHHHhc
Confidence 999999988788899999999999999998864443 345556677778888877765544343
No 278
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=2.1e-15 Score=143.23 Aligned_cols=137 Identities=20% Similarity=0.211 Sum_probs=87.6
Q ss_pred CCCccceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccc
Q 005734 59 TPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE 138 (680)
Q Consensus 59 ~~c~w~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 138 (680)
+.|.|+++.|...+ ++ .+|..+ .++|+.|++++|.+++..+..+..+++|++|+|++|++++..+..
T Consensus 5 C~C~~~~l~~~~~~----------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 5 CSCSGTEIRCNSKG----------LT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp CEEETTEEECCSSC----------CS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred CEeCCCEEEecCCC----------Cc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 45789888886432 32 233322 256777777777777555555677777777777777777544455
Q ss_pred cCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCC
Q 005734 139 ISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 139 ~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
+..+++|+.|+|++|.+++..+..+..+++|++|++++|.+++..+. .+..+..++.++++.|++.+
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-------------~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDG-------------IFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT-------------TTTTCTTCCEEECCSSCBCC
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHH-------------HhcCCcccCEEEecCCCeec
Confidence 66777777777777777755555567777777777777777643222 23445556667777777777
Q ss_pred Ccc
Q 005734 219 SSE 221 (680)
Q Consensus 219 ~~~ 221 (680)
..|
T Consensus 139 ~~~ 141 (177)
T 2o6r_A 139 SCP 141 (177)
T ss_dssp CHH
T ss_pred cCc
Confidence 665
No 279
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.61 E-value=6.1e-16 Score=174.02 Aligned_cols=153 Identities=24% Similarity=0.273 Sum_probs=132.7
Q ss_pred CCccceeeeCC-------------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEc
Q 005734 60 PCLWSGVRCLN-------------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDL 126 (680)
Q Consensus 60 ~c~w~gv~c~~-------------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 126 (680)
.|.|.|+ |+. .+++.|+|++|.+++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5888888 752 37999999999999988899999999999999999999988899999999999999
Q ss_pred cCCcCCccCccccCCCCCCcEEEccCCcccc-cCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCC
Q 005734 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEG-SIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSL 205 (680)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 205 (680)
++|++++..|..++++++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+|. ..+..+..
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~------------~~~~~l~~ 149 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRR------------IDFAGLTS 149 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT------------TTTTTCCE
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCH------------hhhhcccc
Confidence 9999998777779999999999999999986 4678899999999999999997777664 13455666
Q ss_pred CcccCCCCCCCCCCcchhhh
Q 005734 206 HTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 206 ~~~l~~s~n~l~~~~~~~~~ 225 (680)
++.++++.|++++.+|..+.
T Consensus 150 L~~L~L~~n~l~~~~~~~l~ 169 (549)
T 2z81_A 150 LNELEIKALSLRNYQSQSLK 169 (549)
T ss_dssp EEEEEEEETTCCEECTTTTT
T ss_pred cCeeeccCCcccccChhhhh
Confidence 77788888888877776655
No 280
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.61 E-value=2e-15 Score=172.02 Aligned_cols=142 Identities=17% Similarity=0.204 Sum_probs=129.1
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 47899999999999888889999999999999999999988999999999999999999999888999999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc-ccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA-EVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++|.+++..|..++++++|++|++++|.+++ .+|. .+..+.+++.++++.|++++..+..+.
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~-------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 174 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPA-------------YFSNLTNLVHVDLSYNYIQTITVNDLQ 174 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCG-------------GGGTCTTCCEEECCSSCCCEECTTTTH
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechH-------------hHhhcCCCCEEEccCCcceecChhhhh
Confidence 9999998777889999999999999999975 5565 466778888999999999987776655
No 281
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.61 E-value=3.8e-15 Score=162.91 Aligned_cols=162 Identities=20% Similarity=0.233 Sum_probs=127.8
Q ss_pred cceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcC
Q 005734 63 WSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131 (680)
Q Consensus 63 w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 131 (680)
|..|.|.. ..++.|+|++|.+.+..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 67888853 4689999999999998889999999999999999999988889999999999999999999
Q ss_pred CccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCcc-cc----------ccccCCccccc
Q 005734 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIR-SV----------NRKFGQYGFKI 200 (680)
Q Consensus 132 ~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~-~~----------~~~~~~~~~~~ 200 (680)
++..+..+..+++|++|+|++|.++...+..|.++++|+.|++++|...+.++... .. .+.+..+ ..+
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~ 203 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PNL 203 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-CCC
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-ccc
Confidence 96666679999999999999999997767789999999999999976655555411 00 0111111 234
Q ss_pred CCCCCCcccCCCCCCCCCCcchhhh
Q 005734 201 GEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 201 ~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
..+..++.++++.|++++..|..+.
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~ 228 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQ 228 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTT
T ss_pred CCCcccCEEECCCCccCccChhhhc
Confidence 5555666677777777766655544
No 282
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.61 E-value=4.7e-15 Score=149.35 Aligned_cols=139 Identities=20% Similarity=0.183 Sum_probs=122.9
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+..+..+++|++|+|++|.|++..|..|..+++|++|+|++|++++..+..+..+++|+.|+
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 36899999999999998888899999999999999999987778899999999999999999976666689999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
|++|++++..|..++.+++|++|+|++|.+++..+. .+..+..++.++++.|++.+...
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG-------------AFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT-------------TTTTCTTCCEEECCSCCBCTTST
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH-------------HHhCCCCCCEEEeeCCceeCCcc
Confidence 999999976666899999999999999999865553 35566778889999999987643
No 283
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.60 E-value=4.6e-15 Score=143.02 Aligned_cols=127 Identities=21% Similarity=0.292 Sum_probs=116.2
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCc-ccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAP-DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDL 126 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 126 (680)
+.|.|+.+.|.. .+++.|+|++|.+++..+. .++.+++|++|+|++|.|++..|..|.++++|++|+|
T Consensus 6 C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 85 (192)
T 1w8a_A 6 CHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp SEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEEC
Confidence 458899999963 3789999999999877665 4899999999999999999999999999999999999
Q ss_pred cCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCC
Q 005734 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
++|++++..|..|..+++|++|+|++|++++.+|..+..+++|++|++++|.+++..+-
T Consensus 86 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 86 GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 99999998888899999999999999999999999999999999999999999987653
No 284
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=9e-16 Score=179.79 Aligned_cols=183 Identities=16% Similarity=0.208 Sum_probs=143.4
Q ss_pred CCcEeEEEcCCCCCcc-----------------cCCcccC--CCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCc
Q 005734 70 NGKVQMLDMKERSLEG-----------------TLAPDLG--KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK 130 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g-----------------~~p~~~~--~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 130 (680)
..+++.|+|++|.++| .+|+.++ ++++|++|+|++|.+.|.+|..++++++|+.|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 4689999999999999 4999988 99999999999999999999999999999999999998
Q ss_pred -CCc-cCccccCCCC-------CCcEEEccCCcccccCCh--hhcCCCCCCeeeccCcccccccCCccccccccCCcccc
Q 005734 131 -LSG-IIPVEISRLP-------SLKRLLLGNNKFEGSIPL--ELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFK 199 (680)
Q Consensus 131 -l~g-~~p~~~~~l~-------~L~~L~L~~N~l~g~~P~--~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~ 199 (680)
++| .+|..++.++ +|+.|+|++|+++ .+|. .++++++|+.|+|++|.++ .+|.
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~-------------- 590 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEA-------------- 590 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCC--------------
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchh--------------
Confidence 999 8998777665 9999999999999 8999 9999999999999999998 6763
Q ss_pred cCCCCCCcccCCCCCCCCCCcchhhhhhhhhhhh-HHhhhhhhcccccCCCCCCCCCC---CccccccCCCCCCCCCCCC
Q 005734 200 IGEDSLHTNGDHSCANLPGSSETHLVQHSQNLIN-VARRKLLEQSSNLAAEPATVGSS---SDQVIALPTSRSSGTFPAI 275 (680)
Q Consensus 200 ~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~~~~-l~~~~l~~~~n~l~~~~~~~~~~---~~~~~~~~~~~~~g~~p~~ 275 (680)
+..+..++.++++.|+++ .+|..+.+ +.+ +. .+.++.|++...+...... .++..+++.|..+|.+|..
T Consensus 591 ~~~L~~L~~L~Ls~N~l~-~lp~~l~~----l~~~L~--~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l 663 (876)
T 4ecn_A 591 FGTNVKLTDLKLDYNQIE-EIPEDFCA----FTDQVE--GLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNI 663 (876)
T ss_dssp CCTTSEESEEECCSSCCS-CCCTTSCE----ECTTCC--EEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSC
T ss_pred hcCCCcceEEECcCCccc-cchHHHhh----ccccCC--EEECcCCCCCcCchhhhccccCCCCEEECcCCcCCCccccc
Confidence 344556677888888887 56655442 111 22 3445566665433222211 1455667777777766543
No 285
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.59 E-value=3.7e-15 Score=164.65 Aligned_cols=151 Identities=19% Similarity=0.166 Sum_probs=129.5
Q ss_pred ccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCc
Q 005734 62 LWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK 130 (680)
Q Consensus 62 ~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 130 (680)
.|..|.|.. ..++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 367888853 368999999999999888899999999999999999999889999999999999999999
Q ss_pred CCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccC
Q 005734 131 LSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGD 210 (680)
Q Consensus 131 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~ 210 (680)
+++..+..|.++++|++|+|++|.+++..|..+.++++|+.|++++|.+++..|. .|..+..++.++
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~ 158 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR-------------AFSGLNSLEQLT 158 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT-------------SSTTCTTCCEEE
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh-------------hccCCCCCCEEE
Confidence 9965556689999999999999999998899999999999999999999876554 345556677777
Q ss_pred CCCCCCCCCcchhhh
Q 005734 211 HSCANLPGSSETHLV 225 (680)
Q Consensus 211 ~s~n~l~~~~~~~~~ 225 (680)
++.|++++..+..+.
T Consensus 159 l~~n~l~~~~~~~l~ 173 (477)
T 2id5_A 159 LEKCNLTSIPTEALS 173 (477)
T ss_dssp EESCCCSSCCHHHHT
T ss_pred CCCCcCcccChhHhc
Confidence 888877766554443
No 286
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.59 E-value=8.6e-15 Score=149.28 Aligned_cols=139 Identities=18% Similarity=0.165 Sum_probs=124.0
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+..++.+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..+..+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 46899999999999988777889999999999999999988788899999999999999999977777789999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
+++|.+++..|..++.+++|++|++++|.+++..|. .+..+..++.++++.|.+.+..|
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDG-------------VFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT-------------TTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHH-------------HHhCCcCCCEEEccCCCccccCc
Confidence 999999987777789999999999999999976554 35566778889999999988765
No 287
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.59 E-value=5.6e-15 Score=151.66 Aligned_cols=143 Identities=17% Similarity=0.093 Sum_probs=122.9
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCcc-CcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNH-FSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
..+++.|+|++|.+++..|..+..+++|++|+|++|. +....|..+..+++|++|+|++|.+++..|..+..+++|++|
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 3589999999999998888899999999999999997 876668899999999999999999998888889999999999
Q ss_pred EccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 149 LLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 149 ~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++++|.+++..+..++.+++|++|++++|.+++..+. .+..+..++.++++.|++++..|..+.
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~l~~n~l~~~~~~~~~ 198 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER-------------AFRGLHSLDRLLLHQNRVAHVHPHAFR 198 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT-------------TTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHH-------------HhcCccccCEEECCCCcccccCHhHcc
Confidence 9999999976667799999999999999998854433 345566677788888888877666554
No 288
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.59 E-value=8.5e-16 Score=160.07 Aligned_cols=108 Identities=21% Similarity=0.275 Sum_probs=55.9
Q ss_pred EeEEEcCCCCC-cccCCcccC-------CCCCCCEEEccCccCcccCCccc--CCCCCCCEEEccCCcCCccCccccCCC
Q 005734 73 VQMLDMKERSL-EGTLAPDLG-------KLSDLRFLVLQKNHFSGVIPKEL--GELTKLELLDLSNNKLSGIIPVEISRL 142 (680)
Q Consensus 73 l~~L~l~~~~l-~g~~p~~~~-------~l~~L~~L~L~~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~~~l 142 (680)
++.|+|++|.+ .+.+|..+. .+++|++|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..+..+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 44555555555 233444333 45555555555555555555544 5555555555555555543 4444444
Q ss_pred -----CCCcEEEccCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 143 -----PSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 143 -----~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
++|++|+|++|++++..|..++++++|++|++++|.+.+
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 187 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELG 187 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCc
Confidence 555555555555554444555555555555555555444
No 289
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.59 E-value=8.5e-15 Score=160.67 Aligned_cols=162 Identities=19% Similarity=0.192 Sum_probs=128.5
Q ss_pred cceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcC
Q 005734 63 WSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131 (680)
Q Consensus 63 w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 131 (680)
|..|.|.. .+++.|+|++|++++..|..|.++++|++|+|++|.|++..|..|.++++|++|+|++|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 57888853 3689999999999999899999999999999999999998889999999999999999999
Q ss_pred CccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCcc-cc----------ccccCCccccc
Q 005734 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIR-SV----------NRKFGQYGFKI 200 (680)
Q Consensus 132 ~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~-~~----------~~~~~~~~~~~ 200 (680)
++..+..+..+++|++|+|++|.++...+..|.++++|+.|++++|...+.++... .. .+.+... ..+
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~ 214 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNL 214 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCC
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccc
Confidence 97666779999999999999999997666689999999999999976655555411 00 0111111 234
Q ss_pred CCCCCCcccCCCCCCCCCCcchhhh
Q 005734 201 GEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 201 ~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
..+..++.++++.|++++..|..+.
T Consensus 215 ~~l~~L~~L~Ls~N~l~~~~~~~~~ 239 (452)
T 3zyi_A 215 TPLVGLEELEMSGNHFPEIRPGSFH 239 (452)
T ss_dssp TTCTTCCEEECTTSCCSEECGGGGT
T ss_pred cccccccEEECcCCcCcccCccccc
Confidence 4555666777777777766665554
No 290
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.59 E-value=2.1e-14 Score=150.84 Aligned_cols=118 Identities=24% Similarity=0.323 Sum_probs=106.8
Q ss_pred CCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccC
Q 005734 60 PCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSN 128 (680)
Q Consensus 60 ~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 128 (680)
.|.|+.+.|.. .+++.|+|++|.+.+..|..+..+++|++|+|++|.+++..|..+.++++|++|+|++
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 47899999962 3689999999999988888999999999999999999998899999999999999999
Q ss_pred CcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccc
Q 005734 129 NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 129 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~ 180 (680)
|+++ .+|..+. ++|++|++++|.+++..+..++++++|+.|++++|.++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~ 160 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLE 160 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCB
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccc
Confidence 9999 7887765 89999999999999766667999999999999999986
No 291
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=2.8e-15 Score=158.14 Aligned_cols=138 Identities=7% Similarity=0.081 Sum_probs=97.3
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccch-----------------hhHHHHHHHHHHHHHHHHcCCCCccccee
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSK-----------------DWLKSQEMAYRKQVDTLSRINHKNFVNLI 450 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~-----------------~~~~~~~~~f~~E~~~l~~l~H~niv~l~ 450 (680)
...||+|++|.||+|...+|+.||||+.+..... .+.........+|...|.++.+.++....
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 4789999999999999999999999986532110 00011112234566667766544432222
Q ss_pred eEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC--
Q 005734 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-- 528 (680)
Q Consensus 451 g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-- 528 (680)
-+... ..+|||||+++++|.++.... ...+++.|++.+|.|||.. +||||||||.|||+++++
T Consensus 180 p~~~~----~~~LVME~i~G~~L~~l~~~~--------~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 180 PIAQS----RHTIVMSLVDALPMRQVSSVP--------DPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp EEEEE----TTEEEEECCSCEEGGGCCCCS--------CHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECS
T ss_pred eeecc----CceEEEEecCCccHhhhcccH--------HHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCc
Confidence 22222 237999999998887765311 2346789999999999998 999999999999998776
Q ss_pred --------CeEEcccccccc
Q 005734 529 --------AAKVAEICFTTI 540 (680)
Q Consensus 529 --------~~ki~DFGla~~ 540 (680)
.+.|+||+-+..
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEE
T ss_pred ccccccccceEEEEeCCccc
Confidence 388999986654
No 292
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.58 E-value=6.6e-15 Score=174.20 Aligned_cols=153 Identities=18% Similarity=0.143 Sum_probs=134.1
Q ss_pred CccceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccC-CcccCCCCCCCEEEccCCcCCccCcccc
Q 005734 61 CLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVI-PKELGELTKLELLDLSNNKLSGIIPVEI 139 (680)
Q Consensus 61 c~w~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 139 (680)
|.|+.|-+...+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 456666665578999999999999999999999999999999999777776 7889999999999999999999899999
Q ss_pred CCCCCCcEEEccCCcccccCChh--hcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC
Q 005734 140 SRLPSLKRLLLGNNKFEGSIPLE--LSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 140 ~~l~~L~~L~L~~N~l~g~~P~~--l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
.++++|++|+|++|.+++.+|.. ++++++|++|+|++|.+++..+. ..|+.+.+++.++++.|+++
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~------------~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLH------------PSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCC------------GGGGTCSSCCEEEEESSCCC
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccc------------hhHhhCCCCCEEECCCCcCC
Confidence 99999999999999999888776 99999999999999999876553 24566778888899999998
Q ss_pred CCcchhhh
Q 005734 218 GSSETHLV 225 (680)
Q Consensus 218 ~~~~~~~~ 225 (680)
+..+..+.
T Consensus 162 ~~~~~~l~ 169 (844)
T 3j0a_A 162 LVCEHELE 169 (844)
T ss_dssp CCCSGGGH
T ss_pred eeCHHHcc
Confidence 88877665
No 293
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.58 E-value=9.6e-15 Score=150.39 Aligned_cols=138 Identities=22% Similarity=0.196 Sum_probs=111.8
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.|+|++|.+++..+..+..+++|++|+|++|.|++. |.. +.+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 4688999999999888788889999999999999999864 333 78899999999999998 78888888999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHL 224 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~ 224 (680)
++|++++..|..|.++++|++|+|++|.+++..+. .|..+..++.++++.|+|++..+..+
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~L~~N~l~~l~~~~~ 168 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPG-------------LLTPTPKLEKLSLANNNLTELPAGLL 168 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTT-------------TTTTCTTCCEEECTTSCCSCCCTTTT
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChh-------------hcccccCCCEEECCCCcCCccCHHHh
Confidence 99999976667788999999999999988864443 34556677778888888886555443
No 294
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.57 E-value=9.7e-15 Score=143.97 Aligned_cols=143 Identities=19% Similarity=0.216 Sum_probs=122.3
Q ss_pred ceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCC
Q 005734 64 SGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLP 143 (680)
Q Consensus 64 ~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 143 (680)
.+-.|.. +.+++++++++ .+|..+. +.|+.|+|++|.|++..|..|..+++|+.|+|++|++++..|..|..++
T Consensus 7 ~~C~C~~---~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~ 80 (220)
T 2v9t_B 7 AACTCSN---NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLR 80 (220)
T ss_dssp TTSEEET---TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCS
T ss_pred CCCEECC---CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCc
Confidence 3456654 47899999998 5676654 6899999999999988788999999999999999999988899999999
Q ss_pred CCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchh
Q 005734 144 SLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETH 223 (680)
Q Consensus 144 ~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~ 223 (680)
+|++|+|++|.++...+..|..+++|++|+|++|.+++..|. .|..+..++.++++.|++++..+..
T Consensus 81 ~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~L~~N~l~~~~~~~ 147 (220)
T 2v9t_B 81 SLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD-------------AFQDLHNLNLLSLYDNKLQTIAKGT 147 (220)
T ss_dssp SCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-------------TTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred CCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHH-------------HcCCCCCCCEEECCCCcCCEECHHH
Confidence 999999999999954445579999999999999999886664 4566778889999999999887765
Q ss_pred hh
Q 005734 224 LV 225 (680)
Q Consensus 224 ~~ 225 (680)
+.
T Consensus 148 ~~ 149 (220)
T 2v9t_B 148 FS 149 (220)
T ss_dssp TT
T ss_pred Hh
Confidence 54
No 295
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.57 E-value=2.2e-15 Score=172.58 Aligned_cols=152 Identities=16% Similarity=0.188 Sum_probs=125.2
Q ss_pred CCcEeEEEcCCCCCccc-----------------CCcccC--CCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCc
Q 005734 70 NGKVQMLDMKERSLEGT-----------------LAPDLG--KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK 130 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~-----------------~p~~~~--~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 130 (680)
..+++.|+|++|.++|. +|+.++ ++++|++|+|++|.+.|.+|..++++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 46899999999999996 999999 99999999999999999999999999999999999998
Q ss_pred -CCc-cCccccCCC------CCCcEEEccCCcccccCCh--hhcCCCCCCeeeccCcccccccCCcccc---------cc
Q 005734 131 -LSG-IIPVEISRL------PSLKRLLLGNNKFEGSIPL--ELSRFTLLSELQFDDYLTSAEVAGIRSV---------NR 191 (680)
Q Consensus 131 -l~g-~~p~~~~~l------~~L~~L~L~~N~l~g~~P~--~l~~l~~L~~L~l~~N~~~g~~p~~~~~---------~~ 191 (680)
++| .+|..++.+ ++|++|+|++|+++ .+|. .++++++|++|++++|.++|.+|.+... .+
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYN 363 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCC
Confidence 999 899999887 99999999999999 8998 9999999999999999999999842111 01
Q ss_pred ccCCcccccCCCCC-CcccCCCCCCCCCCcchh
Q 005734 192 KFGQYGFKIGEDSL-HTNGDHSCANLPGSSETH 223 (680)
Q Consensus 192 ~~~~~~~~~~~~~~-~~~l~~s~n~l~~~~~~~ 223 (680)
.+..++..+..+.. ++.++++.|+++ .+|..
T Consensus 364 ~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~ 395 (636)
T 4eco_A 364 QITEIPANFCGFTEQVENLSFAHNKLK-YIPNI 395 (636)
T ss_dssp EEEECCTTSEEECTTCCEEECCSSCCS-SCCSC
T ss_pred ccccccHhhhhhcccCcEEEccCCcCc-ccchh
Confidence 11122233444555 666666666665 44443
No 296
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.57 E-value=2.5e-15 Score=159.35 Aligned_cols=154 Identities=24% Similarity=0.274 Sum_probs=122.6
Q ss_pred CCCCccceeeeCC-------------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEE
Q 005734 58 STPCLWSGVRCLN-------------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELL 124 (680)
Q Consensus 58 ~~~c~w~gv~c~~-------------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 124 (680)
.++|.|.++ |+. .+++.|++++|.+++..+..+..+++|++|+|++|.+++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 356888887 641 378999999999998777789999999999999999998888899999999999
Q ss_pred EccCCcCCccCccccCCCCCCcEEEccCCcccccCCh--hhcCCCCCCeeeccCcccccccCCccccccccCCcccccCC
Q 005734 125 DLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPL--ELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGE 202 (680)
Q Consensus 125 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~--~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~ 202 (680)
+|++|++++..+..+..+++|++|+|++|.+++ +|. .+.++++|++|++++|...+.++. ..+..
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~------------~~~~~ 172 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQR------------KDFAG 172 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECT------------TTTTT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCH------------HHccC
Confidence 999999996544558999999999999999994 665 789999999999999954333332 13444
Q ss_pred CCCCcccCCCCCCCCCCcchhhh
Q 005734 203 DSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 203 ~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
+..++.++++.|++++..|..+.
T Consensus 173 l~~L~~L~l~~n~l~~~~~~~l~ 195 (353)
T 2z80_A 173 LTFLEELEIDASDLQSYEPKSLK 195 (353)
T ss_dssp CCEEEEEEEEETTCCEECTTTTT
T ss_pred CCCCCEEECCCCCcCccCHHHHh
Confidence 55566666777776666555444
No 297
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.57 E-value=4.2e-15 Score=169.01 Aligned_cols=113 Identities=13% Similarity=0.139 Sum_probs=67.6
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
+++.+++++|.+....+..+..+++|++|+|++|.|++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 34566666666554433345556666666666666666555566666666666666666665555555666666666666
Q ss_pred CCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
+|.+++..+..|+++++|++|+|++|.+++..|
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 164 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED 164 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCCh
Confidence 666664333334666666666666666655444
No 298
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.57 E-value=1.3e-14 Score=139.89 Aligned_cols=128 Identities=24% Similarity=0.332 Sum_probs=94.8
Q ss_pred EEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCc
Q 005734 75 MLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154 (680)
Q Consensus 75 ~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~ 154 (680)
.+++++|+++ .+|..+. +.|+.|+|++|.|+ .+|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 3455556665 4555443 57888888888887 677888888888888888888887666778888888888888888
Q ss_pred ccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 155 FEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 155 l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
+++..|..|..+++|++|+|++|.+++..+. .|..+..+..++++.|.+...
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEG-------------AFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTT-------------TTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChh-------------hhhcCccccEEEeCCCCeecC
Confidence 8877677788888888888888888753332 344556677788888888754
No 299
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.56 E-value=6.2e-15 Score=167.89 Aligned_cols=160 Identities=16% Similarity=0.120 Sum_probs=132.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.|+|++|.+++..|..|+++++|++|+|++|.+.+..|..|.++++|++|+|++|++++..|..++.+++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 47899999999999988999999999999999999999999999999999999999999999989999999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc-ccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA-EVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQ 229 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~ 229 (680)
++|.+++..|..++++++|++|++++|.+++ .+|. +..+..++.++++.|++++..+..+.
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~--------------~~~l~~L~~L~L~~n~l~~~~~~~~~---- 174 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPK--------------GFPTEKLKVLDFQNNAIHYLSKEDMS---- 174 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCT--------------TCCCTTCCEEECCSSCCCEECHHHHH----
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCccc--------------ccCCcccCEEEcccCcccccChhhhh----
Confidence 9999998667889999999999999999987 3343 22256677788888888877666555
Q ss_pred hhhhHHhhhhhhcccccCC
Q 005734 230 NLINVARRKLLEQSSNLAA 248 (680)
Q Consensus 230 ~~~~l~~~~l~~~~n~l~~ 248 (680)
.+.++..+.+..+.|++..
T Consensus 175 ~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 175 SLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TTTTCCSEEEECTTCCCCE
T ss_pred hhcccceeEEecCCCccCc
Confidence 2223332234455555544
No 300
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.56 E-value=1.9e-14 Score=146.47 Aligned_cols=162 Identities=20% Similarity=0.226 Sum_probs=131.2
Q ss_pred CCCCCCCCCCCC--ccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccC
Q 005734 50 FSNWNKNDSTPC--LWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELG 116 (680)
Q Consensus 50 l~~W~~~~~~~c--~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~ 116 (680)
...|.+. .+.| .|..+.|.. ..++.|+|++|.+++..+..|..+++|++|+|++|.++...+..|.
T Consensus 4 ~C~~~~~-~C~c~~~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~ 82 (270)
T 2o6q_A 4 LCKKDGG-VCSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFK 82 (270)
T ss_dssp CBGGGTC-SBEEETTTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTS
T ss_pred cCCCCCC-CCEeCCCCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhc
Confidence 4567543 2334 478888853 3589999999999977777899999999999999999966566678
Q ss_pred CCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCc
Q 005734 117 ELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQY 196 (680)
Q Consensus 117 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~ 196 (680)
.+++|++|+|++|++++..+..+..+++|++|+|++|.+++..|..++.+++|++|++++|.+++..+.
T Consensus 83 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~----------- 151 (270)
T 2o6q_A 83 ELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKG----------- 151 (270)
T ss_dssp SCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-----------
T ss_pred CCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHh-----------
Confidence 999999999999999976667789999999999999999987778899999999999999998864433
Q ss_pred ccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 197 GFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 197 ~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
.|..+..++.++++.|++++..+..+.
T Consensus 152 --~~~~l~~L~~L~L~~n~l~~~~~~~~~ 178 (270)
T 2o6q_A 152 --VFDKLTSLKELRLYNNQLKRVPEGAFD 178 (270)
T ss_dssp --TTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred --HccCCcccceeEecCCcCcEeChhHhc
Confidence 245556677788888888776655443
No 301
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.56 E-value=6.5e-15 Score=143.72 Aligned_cols=136 Identities=20% Similarity=0.190 Sum_probs=117.3
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+..+..+++|++|+|++|.|++..+..+..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 36899999999999976666789999999999999999977677789999999999999999976666789999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
|++|.+++..+..+..+++|+.|++++|.+.+..|. +..++++.|+++|.+|..++
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~--------------------l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG--------------------IRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTT--------------------THHHHHHHHHCTTTBBCTTS
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecCCCC--------------------HHHHHHHHHhCCceeeccCc
Confidence 999999976666689999999999999988876554 34466777888888887665
No 302
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.55 E-value=1.5e-14 Score=147.59 Aligned_cols=187 Identities=20% Similarity=0.195 Sum_probs=137.6
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+.++++|++|++++|++++..+..+..+++|++|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 36899999999999988778899999999999999999988889999999999999999999977776899999999999
Q ss_pred ccCCcccc-cCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCc-ccCCCCCCCCCCcchhhhhh
Q 005734 150 LGNNKFEG-SIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHT-NGDHSCANLPGSSETHLVQH 227 (680)
Q Consensus 150 L~~N~l~g-~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~l~~s~n~l~~~~~~~~~~~ 227 (680)
+++|.+++ .+|..++++++|++|++++|.+++..+.... .+..+..+. .++++.|++++..+..+..
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~----------~l~~L~~l~l~L~ls~n~l~~~~~~~~~~- 199 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR----------VLHQMPLLNLSLDLSLNPMNFIQPGAFKE- 199 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH----------HHHTCTTCCEEEECCSSCCCEECTTSSCS-
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhh----------hhhhccccceeeecCCCcccccCccccCC-
Confidence 99999986 4799999999999999999999876543211 111111121 4677777777655443331
Q ss_pred hhhhhhHHhhhhhhcccccCCCCCCC-C-CCCccccccCCCCCCCCCC
Q 005734 228 SQNLINVARRKLLEQSSNLAAEPATV-G-SSSDQVIALPTSRSSGTFP 273 (680)
Q Consensus 228 ~~~~~~l~~~~l~~~~n~l~~~~~~~-~-~~~~~~~~~~~~~~~g~~p 273 (680)
.++. .+.++.|++...+... . ...++..++..|..++..|
T Consensus 200 ----~~L~--~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 200 ----IRLK--ELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp ----CCEE--EEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ----Cccc--EEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 0111 3344556665544321 1 1234455666666555543
No 303
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.55 E-value=2.6e-14 Score=141.81 Aligned_cols=143 Identities=19% Similarity=0.193 Sum_probs=120.0
Q ss_pred cceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCC
Q 005734 63 WSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRL 142 (680)
Q Consensus 63 w~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 142 (680)
|..-.|.. +.++++++.++ .+|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|++++..+..|..+
T Consensus 14 ~~~~~Cs~---~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 87 (229)
T 3e6j_A 14 PSQCSCSG---TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSL 87 (229)
T ss_dssp CTTCEEET---TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCEEeC---CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccC
Confidence 45567764 46899999887 6676554 899999999999999889999999999999999999985555667999
Q ss_pred CCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcch
Q 005734 143 PSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSET 222 (680)
Q Consensus 143 ~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~ 222 (680)
++|++|+|++|++++..+..+..+++|++|+|++|.++ .+|. .+..+..++.++++.|++++..+.
T Consensus 88 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~-------------~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 88 TQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPR-------------GIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCT-------------TGGGCTTCSEEECCSSCCCCCCTT
T ss_pred CCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCc-------------ccccCCCCCEEECCCCcCCccCHH
Confidence 99999999999999766677899999999999999998 5554 345567788899999999987765
Q ss_pred hhh
Q 005734 223 HLV 225 (680)
Q Consensus 223 ~~~ 225 (680)
.+.
T Consensus 154 ~~~ 156 (229)
T 3e6j_A 154 AFD 156 (229)
T ss_dssp TTT
T ss_pred HHh
Confidence 444
No 304
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.55 E-value=4.5e-15 Score=154.58 Aligned_cols=183 Identities=19% Similarity=0.182 Sum_probs=133.4
Q ss_pred CCcEeEEEcCCCCCcccCCccc--CCCCCCCEEEccCccCcccCCcccCCC-----CCCCEEEccCCcCCccCccccCCC
Q 005734 70 NGKVQMLDMKERSLEGTLAPDL--GKLSDLRFLVLQKNHFSGVIPKELGEL-----TKLELLDLSNNKLSGIIPVEISRL 142 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~--~~l~~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l 142 (680)
..+++.|+|++|.+++.+|..+ +.+++|++|+|++|.+++. |..++.+ ++|++|+|++|++++..|..++.+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 3579999999999999999876 8999999999999999977 8888877 999999999999998888899999
Q ss_pred CCCcEEEccCCccccc--CChhh--cCCCCCCeeeccCccccc--ccCCccccccccCCcccccCCCCCCcccCCCCCCC
Q 005734 143 PSLKRLLLGNNKFEGS--IPLEL--SRFTLLSELQFDDYLTSA--EVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANL 216 (680)
Q Consensus 143 ~~L~~L~L~~N~l~g~--~P~~l--~~l~~L~~L~l~~N~~~g--~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l 216 (680)
++|++|+|++|++.|. +|..+ +.+++|++|++++|.+++ .++. ..+..+..++.++++.|++
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~------------~~~~~l~~L~~L~Ls~N~l 240 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCS------------ALAAARVQLQGLDLSHNSL 240 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHH------------HHHHTTCCCSEEECTTSCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHH------------HHHhcCCCCCEEECCCCcC
Confidence 9999999999998876 34455 889999999999999874 2221 1123345667778888888
Q ss_pred CCCcchhhhhhhhhhhhHHhhhhhhcccccCCCCCCCCCCCccccccCCCCCCCC
Q 005734 217 PGSSETHLVQHSQNLINVARRKLLEQSSNLAAEPATVGSSSDQVIALPTSRSSGT 271 (680)
Q Consensus 217 ~~~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~g~ 271 (680)
++.+|..... .+.++. .+.+++|++...+.... ..++..+++.|..++.
T Consensus 241 ~~~~~~~~~~---~l~~L~--~L~Ls~N~l~~ip~~~~-~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 241 RDAAGAPSCD---WPSQLN--SLNLSFTGLKQVPKGLP-AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CSSCCCSCCC---CCTTCC--EEECTTSCCSSCCSSCC-SEEEEEECCSSCCCSC
T ss_pred Ccccchhhhh---hcCCCC--EEECCCCccChhhhhcc-CCceEEECCCCCCCCC
Confidence 7766432111 111122 34455666664443332 3345566666666554
No 305
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.55 E-value=4.9e-14 Score=147.83 Aligned_cols=119 Identities=22% Similarity=0.352 Sum_probs=103.1
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEcc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS 127 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 127 (680)
+.|.|+.+.|.. ..++.|+|++|.+++..+..|+.+++|++|+|++|.+++..|..+..+++|++|+|+
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 347899999962 468999999999998877789999999999999999998889999999999999999
Q ss_pred CCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccc
Q 005734 128 NNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~ 180 (680)
+|+++ .+|..+. ++|+.|++++|.+++..+..+.++++|+.|++++|.++
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 158 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLK 158 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCC
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCC
Confidence 99998 6777654 78888888888888766677888888888888888775
No 306
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.54 E-value=2.3e-14 Score=162.93 Aligned_cols=112 Identities=20% Similarity=0.209 Sum_probs=103.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+|+.|+|++|.+++..|..|+.+++|++|+|++|.|++..|..|+++++|++|+|++|.+++..+..|+.+++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 47899999999999988889999999999999999999988888999999999999999999555555799999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAE 182 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~ 182 (680)
++|.+++..|..++.+++|++|++++|.+++.
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 99999998888999999999999999998864
No 307
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.54 E-value=1.8e-14 Score=166.37 Aligned_cols=141 Identities=18% Similarity=0.147 Sum_probs=120.3
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+++..+..|+++++|++|+|++|.+++..|..++++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47999999999999887778999999999999999999988999999999999999999999544457999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHL 224 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~ 224 (680)
++|.+++..|..|+++++|++|++++|.+++..|. .+..+.+++.++++.|++++..+..+
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-------------~~~~l~~L~~L~L~~n~l~~~~~~~~ 165 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLG-------------TQVQLENLQELLLSNNKIQALKSEEL 165 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCC-------------SSSCCTTCCEEECCSSCCCCBCHHHH
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCch-------------hhcccccCCEEEccCCcccccCHHHh
Confidence 99999977778899999999999999999887665 23445566667777777766655543
No 308
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.54 E-value=2.5e-14 Score=156.87 Aligned_cols=139 Identities=20% Similarity=0.141 Sum_probs=118.8
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.|++++|.+.+.+|..++.+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..+..+++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 57888999999998888888899999999999999999888888999999999999999998877888889999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcch
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSET 222 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~ 222 (680)
++|++++..|..+..+++|++|++++|.+++..+. .+..+..++.+++++|++++..|.
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDG-------------IFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT-------------TTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHh-------------HhccCCcccEEEccCCCcccCCCc
Confidence 99999888888899999999999999988864333 345667778889999999888773
No 309
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.54 E-value=1.3e-14 Score=150.47 Aligned_cols=142 Identities=17% Similarity=0.143 Sum_probs=117.4
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCC-cccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP-KELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
..+++.|+|++|.+. .+|..+..+++|++|++++|.+++..+ ..+..+++|++|+|++|.+++..|..+..+++|+.|
T Consensus 77 ~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 468999999999988 467778899999999999999986554 578899999999999999998888889999999999
Q ss_pred EccCCcccc-cCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 149 LLGNNKFEG-SIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 149 ~L~~N~l~g-~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++++|.+++ .+|..+..+++|++|++++|.+++..|. .+..+..++.++++.|++++..+..+.
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-------------~~~~l~~L~~L~L~~N~l~~~~~~~~~ 220 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT-------------AFNSLSSLQVLNMSHNNFFSLDTFPYK 220 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT-------------TTTTCTTCCEEECTTSCCSBCCSGGGT
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHH-------------HhcCCCCCCEEECCCCccCccChhhcc
Confidence 999999987 5788899999999999999998876554 344556667777888887766554443
No 310
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.53 E-value=2.8e-14 Score=140.67 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=108.8
Q ss_pred CCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 69 LNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 69 ~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
...+++.|+|++|.+++..+..|..+++|++|+|++|.|++..|..|..+++|++|+|++|++++..|..+..+++|++|
T Consensus 55 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 134 (220)
T 2v70_A 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 134 (220)
T ss_dssp GCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE
T ss_pred cCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE
Confidence 34689999999999998888899999999999999999998888889999999999999999999889999999999999
Q ss_pred EccCCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 149 LLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 149 ~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
+|++|++++..|..|..+++|+.|++++|.+++..+
T Consensus 135 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 135 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp ECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999999999889999999999999999999987654
No 311
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.53 E-value=1.4e-14 Score=136.16 Aligned_cols=135 Identities=22% Similarity=0.205 Sum_probs=115.0
Q ss_pred CcEeEEEcCCCCCc-ccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLE-GTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|++++|.++ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57899999999998 88898889999999999999999975 7899999999999999999988888888899999999
Q ss_pred ccCCcccccCC--hhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCC
Q 005734 150 LGNNKFEGSIP--LELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 150 L~~N~l~g~~P--~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
|++|.+++ +| ..++.+++|++|++++|.+++..+.. ...+..+..++.++++.|.+..
T Consensus 102 Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~----------~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYR----------ESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHH----------HHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHH----------HHHHHhCccCcEecCCCCChhh
Confidence 99999996 44 78999999999999999998654410 0134556677888888887754
No 312
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.53 E-value=1.1e-14 Score=134.05 Aligned_cols=112 Identities=24% Similarity=0.317 Sum_probs=101.3
Q ss_pred CcEeEEEcCCCCCc-ccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLE-GTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 47899999999998 88999899999999999999999975 7899999999999999999988998888899999999
Q ss_pred ccCCccccc-CChhhcCCCCCCeeeccCcccccccC
Q 005734 150 LGNNKFEGS-IPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 150 L~~N~l~g~-~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
+++|.+++. .|..++.+++|++|++++|.+++..+
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 999999973 45789999999999999999987544
No 313
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.52 E-value=1.2e-14 Score=162.91 Aligned_cols=199 Identities=20% Similarity=0.242 Sum_probs=132.9
Q ss_pred CCCCCCCCCCCC-----cccee-eeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCE
Q 005734 50 FSNWNKNDSTPC-----LWSGV-RCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLEL 123 (680)
Q Consensus 50 l~~W~~~~~~~c-----~w~gv-~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~ 123 (680)
+.+|.. +..|| .|.|+ .|..++++.|+|++|++++ +|..+. ++|++|+|++|.|+ .+| ..+++|+.
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHHHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 445643 34577 79999 7987899999999999997 787664 78999999999999 678 56899999
Q ss_pred EEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccc-------cccccCCc
Q 005734 124 LDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRS-------VNRKFGQY 196 (680)
Q Consensus 124 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~-------~~~~~~~~ 196 (680)
|+|++|+|++ +|. +.. +|++|+|++|.+++ +|. .+++|+.|++++|.+++ +|.... ..+.+..+
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L~~l 175 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQLTFL 175 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCCCCCc
Confidence 9999999996 887 665 99999999999997 787 68899999999999987 554110 01122222
Q ss_pred ccccCCCCCCcccCCCCCCCCCCcchhhhhhhhhh-hhHHh-hhhhhcccccCCCCCCCC-CCCccccccCCCCCCCCCC
Q 005734 197 GFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNL-INVAR-RKLLEQSSNLAAEPATVG-SSSDQVIALPTSRSSGTFP 273 (680)
Q Consensus 197 ~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~~-~~l~~-~~l~~~~n~l~~~~~~~~-~~~~~~~~~~~~~~~g~~p 273 (680)
+. |. .++..+++++|+|+ .+|. +.. ++ ..... ..+.+++|++...+.... ...+...++..|.+++.+|
T Consensus 176 p~-l~--~~L~~L~Ls~N~L~-~lp~-~~~---~L~~~~~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 176 PE-LP--ESLEALDVSTNLLE-SLPA-VPV---RNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC-CC--TTCCEEECCSSCCS-SCCC-CC-----------CCEEEECCSSCCCCCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ch-hh--CCCCEEECcCCCCC-chhh-HHH---hhhcccccceEEecCCCcceecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 22 32 45666777777777 3333 331 11 00000 133455666654443221 1124455566665555443
No 314
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.52 E-value=2.8e-14 Score=168.81 Aligned_cols=111 Identities=21% Similarity=0.240 Sum_probs=98.6
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+.+..|..+..+++|+.|+|++|.+++..|..|..+++|++|+|++|++++..|..+..+++|+.|+|
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 47889999999999888888899999999999999999888888999999999999999998888888999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
++|.+++..|..+..+++|++|++++|.+++
T Consensus 346 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 346 QKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp CSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 9999987777778889999999999888765
No 315
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.52 E-value=7.8e-15 Score=152.59 Aligned_cols=185 Identities=15% Similarity=0.144 Sum_probs=128.6
Q ss_pred cEeEEEcCCCCCcccCCccc--CCCCCCCEEEccCccCcccCC----cccCCCCCCCEEEccCCcCCccCccccCCCCCC
Q 005734 72 KVQMLDMKERSLEGTLAPDL--GKLSDLRFLVLQKNHFSGVIP----KELGELTKLELLDLSNNKLSGIIPVEISRLPSL 145 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~--~~l~~L~~L~L~~N~l~g~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 145 (680)
+++.|++++|.+.+..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..++.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 48889999999988888887 888899999999999887665 345578889999999999987777888889999
Q ss_pred cEEEccCCccccc--CC--hhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 146 KRLLLGNNKFEGS--IP--LELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 146 ~~L~L~~N~l~g~--~P--~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
++|+|++|++.+. ++ ..++.+++|++|++++|.++. ++.... ..+..+..++.+++++|++++..|
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~---------~l~~~l~~L~~L~Ls~N~l~~~~p 241 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCA---------ALAAAGVQPHSLDLSHNSLRATVN 241 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHH---------HHHHHTCCCSSEECTTSCCCCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHH---------HHHhcCCCCCEEECCCCCCCccch
Confidence 9999999987653 22 234688889999999988863 121000 012445667788899999988877
Q ss_pred hhhhhhhhhhhhHHhhhhhhcccccCCCCCCCCCCCccccccCCCCCCC
Q 005734 222 THLVQHSQNLINVARRKLLEQSSNLAAEPATVGSSSDQVIALPTSRSSG 270 (680)
Q Consensus 222 ~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~g 270 (680)
..+.... ...++. .+.+++|++...+.... ..++..+++.|..++
T Consensus 242 ~~~~~~~-~~~~L~--~L~Ls~N~l~~lp~~~~-~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 242 PSAPRCM-WSSALN--SLNLSFAGLEQVPKGLP-AKLRVLDLSSNRLNR 286 (310)
T ss_dssp SCCSSCC-CCTTCC--CEECCSSCCCSCCSCCC-SCCSCEECCSCCCCS
T ss_pred hhHHhcc-CcCcCC--EEECCCCCCCchhhhhc-CCCCEEECCCCcCCC
Confidence 6654211 001222 34456777765443332 345566677776654
No 316
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.52 E-value=2.3e-14 Score=142.99 Aligned_cols=136 Identities=17% Similarity=0.170 Sum_probs=116.6
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCcc-CcccCCcccCCCCCCCEEEccC-CcCCccCccccCCCCCCcEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNH-FSGVIPKELGELTKLELLDLSN-NKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L 148 (680)
..++.|++++|++++..+..|..+++|++|++++|. +++..+..|.++++|++|+|++ |++++..+..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 579999999999998777789999999999999997 8876677899999999999999 99997667789999999999
Q ss_pred EccCCcccccCChhhcCCCCCC---eeeccCc-ccccccCCccccccccCCcccccCCCCCCc-ccCCCCCCCCCCcch
Q 005734 149 LLGNNKFEGSIPLELSRFTLLS---ELQFDDY-LTSAEVAGIRSVNRKFGQYGFKIGEDSLHT-NGDHSCANLPGSSET 222 (680)
Q Consensus 149 ~L~~N~l~g~~P~~l~~l~~L~---~L~l~~N-~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~l~~s~n~l~~~~~~ 222 (680)
++++|.+++ +|. ++.+++|+ +|++++| .+++..+. .|..+..++ .++++.|+++ .+|.
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~-------------~~~~l~~L~~~L~l~~n~l~-~i~~ 173 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVN-------------AFQGLCNETLTLKLYNNGFT-SVQG 173 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTT-------------TTTTTBSSEEEEECCSCCCC-EECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcc-------------cccchhcceeEEEcCCCCCc-ccCH
Confidence 999999996 887 88999998 9999999 77654332 355667777 8899999988 4443
No 317
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.51 E-value=2.6e-14 Score=162.69 Aligned_cols=111 Identities=17% Similarity=0.108 Sum_probs=78.6
Q ss_pred CcEeEEEcCCCCCccc--CCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCc-cccCCCCCCcE
Q 005734 71 GKVQMLDMKERSLEGT--LAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIP-VEISRLPSLKR 147 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~--~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 147 (680)
.+++.|++++|.+++. +|..+..+++|++|++++|.+.+ +|..+..+++|+.|+|++|++++..| ..+..+++|++
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 5677777777777755 36666777777777777777764 55667777777777777777776655 46677777777
Q ss_pred EEccCCcccccCChhhcCCCCCCeeeccCcccccc
Q 005734 148 LLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAE 182 (680)
Q Consensus 148 L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~ 182 (680)
|++++|.+++.+|..++.+++|++|++++|.+++.
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 463 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDN 463 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGG
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCc
Confidence 77777777776777777777777777777777663
No 318
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.50 E-value=1e-13 Score=133.61 Aligned_cols=122 Identities=25% Similarity=0.308 Sum_probs=110.3
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEcc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS 127 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 127 (680)
+.|.|..+.|.. ..++.|+|++|.++ .+|..|..+++|++|+|++|.|++..|..|.++++|++|+|+
T Consensus 8 C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls 86 (193)
T 2wfh_A 8 CTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILS 86 (193)
T ss_dssp CEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECC
Confidence 457788888853 36899999999998 778899999999999999999998888899999999999999
Q ss_pred CCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 128 NNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
+|++++..|..|..+++|++|+|++|.+++..+..|..+++|+.|++++|.+..
T Consensus 87 ~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 87 YNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999998888889999999999999999996555679999999999999998875
No 319
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.50 E-value=1.7e-13 Score=130.02 Aligned_cols=115 Identities=23% Similarity=0.273 Sum_probs=103.2
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+++..+..+..+++|++|+|++|.|++..+..+..+++|++|+|++|++++..+..+..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 57999999999999776677899999999999999999776777899999999999999999777777899999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCC
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
++|.+++..+..+..+++|++|++++|.+++..|.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99999965555578999999999999999987764
No 320
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.49 E-value=5.3e-14 Score=151.13 Aligned_cols=136 Identities=15% Similarity=0.172 Sum_probs=114.0
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+++++.++...+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..+..+++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 46788999999887554445788999999999999999887889999999999999999999877888999999999999
Q ss_pred cCCcccccCChh-hcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCc
Q 005734 151 GNNKFEGSIPLE-LSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSS 220 (680)
Q Consensus 151 ~~N~l~g~~P~~-l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~ 220 (680)
++|.++ .+|.. ++++++|++|++++|.+++..|. .+..+..++.++++.|++++..
T Consensus 125 ~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~-------------~~~~l~~L~~L~l~~n~l~~~~ 181 (390)
T 3o6n_A 125 ERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDD-------------TFQATTSLQNLQLSSNRLTHVD 181 (390)
T ss_dssp CSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTT-------------TTSSCTTCCEEECCSSCCSBCC
T ss_pred CCCccC-cCCHHHhcCCCCCcEEECCCCccCccChh-------------hccCCCCCCEEECCCCcCCccc
Confidence 999999 45654 68999999999999998875554 3556667778888888887653
No 321
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.49 E-value=1.3e-13 Score=148.06 Aligned_cols=111 Identities=21% Similarity=0.247 Sum_probs=101.1
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccc-cCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE-ISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~ 149 (680)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..++++++|++|+|++|+++ .+|.. +..+++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 57999999999999887889999999999999999999888888999999999999999999 55554 68999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccc
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAE 182 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~ 182 (680)
+++|.+++..|..++.+++|++|++++|.+++.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 999999987788899999999999999998753
No 322
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.48 E-value=8.1e-14 Score=134.78 Aligned_cols=132 Identities=11% Similarity=0.138 Sum_probs=111.2
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+. .+| .+..+++|++|++++|.++ .++.+..+++|++|+|++|++++..|..++.+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 46889999999998 556 6889999999999999775 3457899999999999999999888889999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSS 220 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~ 220 (680)
++|.+++..|..++.+++|++|++++|.+.+.+|. +..+..++.+++++|++++..
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~--------------l~~l~~L~~L~l~~n~i~~~~ 175 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP--------------LKTLPELKSLNIQFDGVHDYR 175 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGG--------------GGGCSSCCEEECTTBCCCCCT
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHh--------------hcCCCCCCEEECCCCCCcChH
Confidence 99999988888999999999999999984444442 345566788889999888743
No 323
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.48 E-value=2.4e-13 Score=139.88 Aligned_cols=134 Identities=21% Similarity=0.165 Sum_probs=113.0
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+ .+.+++|++|+|++|.|+ .+|..+..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 54 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp CTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 4689999999999986533 378999999999999998 7888899999999999999999977678899999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
|++|++++..|..|..+++|+.|+|++|++++..+. .|..+..++.++++.|+++..
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~-------------~~~~l~~L~~L~L~~N~l~~i 187 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAG-------------LLNGLENLDTLLLQENSLYTI 187 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTT-------------TTTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHH-------------HhcCcCCCCEEECCCCcCCcc
Confidence 999999976666788999999999999999853332 345567778888999988843
No 324
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.48 E-value=2.3e-14 Score=158.59 Aligned_cols=171 Identities=20% Similarity=0.149 Sum_probs=113.6
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
+|+.|+|++|.+++..|..|+.+++|++|+|++|.|++..| +..+++|++|+|++|.+++. |. .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~~----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-LV----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEE-EE----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCC-CC----CCCcCEEECc
Confidence 78999999999998878889999999999999999987665 88899999999999998853 32 2777888888
Q ss_pred CCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhhhh
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNL 231 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~~ 231 (680)
+|.+++..+. .+++|+.|++++|.+++..|. .++.+..+..+++++|++++.+|..+....
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l--- 168 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDL-------------DEGCRSRVQYLDLKLNEIDTVNFAELAASS--- 168 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGB-------------CGGGGSSEEEEECTTSCCCEEEGGGGGGGT---
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCch-------------hhcCCCCCCEEECCCCCCCCcChHHHhhhC---
Confidence 8887765443 356777888888877776554 233445566677777777776665543211
Q ss_pred hhHHhhhhhhcccccCCCCCCCCCCCccccccCCCCCCC
Q 005734 232 INVARRKLLEQSSNLAAEPATVGSSSDQVIALPTSRSSG 270 (680)
Q Consensus 232 ~~l~~~~l~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~g 270 (680)
.++. .+.+++|++.+.++......+...+++.|.+++
T Consensus 169 ~~L~--~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~ 205 (487)
T 3oja_A 169 DTLE--HLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF 205 (487)
T ss_dssp TTCC--EEECTTSCCCEEECCCCCTTCCEEECCSSCCCE
T ss_pred Cccc--EEecCCCccccccccccCCCCCEEECCCCCCCC
Confidence 1111 233445555443322222234445555555444
No 325
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.47 E-value=1.3e-13 Score=155.59 Aligned_cols=142 Identities=17% Similarity=0.158 Sum_probs=124.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46899999999999888889999999999999999999888888999999999999999999888889999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc-ccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA-EVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++|.+++..+..++++++|++|++++|.+++ .+|. .+..+.+++.++++.|++++..+..+.
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~-------------~~~~l~~L~~L~l~~n~l~~~~~~~~~ 170 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE-------------YFSNLTNLEHLDLSSNKIQSIYCTDLR 170 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCG-------------GGGGCTTCCEEECTTSCCCEECGGGGH
T ss_pred cccccccCCCccccccccccEEecCCCccceecChh-------------hhcccCCCCEEeCcCCccceecHHHcc
Confidence 9999996555579999999999999999876 4564 456677888899999999887776555
No 326
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.47 E-value=1.3e-13 Score=156.86 Aligned_cols=144 Identities=19% Similarity=0.147 Sum_probs=116.4
Q ss_pred CcEeEEEcCCCCCcccC--CcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccc-cCCCCCCcE
Q 005734 71 GKVQMLDMKERSLEGTL--APDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE-ISRLPSLKR 147 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~--p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~ 147 (680)
.+++.|++++|.+.+.. +..+..+++|++|++++|.+.+..|..+..+++|+.|+|++|++++..|.. +..+++|+.
T Consensus 350 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 429 (606)
T 3t6q_A 350 ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKV 429 (606)
T ss_dssp TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCE
T ss_pred CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCE
Confidence 57899999999998765 778899999999999999999888999999999999999999998877654 889999999
Q ss_pred EEccCCcccccCChhhcCCCCCCeeeccCcccccc-cCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 148 LLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAE-VAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 148 L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
|++++|.+++..|..++.+++|+.|++++|.+++. +|.. ..+..+..++.++++.|++++..|..+.
T Consensus 430 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-----------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 497 (606)
T 3t6q_A 430 LNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKT-----------NSLQTLGRLEILVLSFCDLSSIDQHAFT 497 (606)
T ss_dssp EECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSS-----------CGGGGCTTCCEEECTTSCCCEECTTTTT
T ss_pred EECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccc-----------hhhccCCCccEEECCCCccCccChhhhc
Confidence 99999999988888899999999999999998763 2221 1234445556666666666665555443
No 327
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.47 E-value=6.1e-14 Score=145.79 Aligned_cols=161 Identities=18% Similarity=0.109 Sum_probs=121.8
Q ss_pred CCcEeEEEcCCCCCcccCC----cccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCcc--Cc--cccCC
Q 005734 70 NGKVQMLDMKERSLEGTLA----PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGI--IP--VEISR 141 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p----~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--~p--~~~~~ 141 (680)
..+++.|+|++|.+++..+ ..+..+++|++|+|++|.+.+..|..++.+++|++|+|++|++.+. ++ ..+..
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 4578999999999998655 3456799999999999999988889999999999999999998753 32 23478
Q ss_pred CCCCcEEEccCCcccccCCh----hhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC
Q 005734 142 LPSLKRLLLGNNKFEGSIPL----ELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 142 l~~L~~L~L~~N~l~g~~P~----~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
+++|++|+|++|+++ .+|. .++.+++|++|+|++|.+++.+|... . .+..+..++.+++++|+++
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~------~----~~~~~~~L~~L~Ls~N~l~ 264 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSA------P----RCMWSSALNSLNLSFAGLE 264 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCC------S----SCCCCTTCCCEECCSSCCC
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhH------H----hccCcCcCCEEECCCCCCC
Confidence 999999999999997 3343 25788999999999999998877521 1 1222357788999999998
Q ss_pred CCcchhhhhhhhhhhhHHhhhhhhcccccCCCC
Q 005734 218 GSSETHLVQHSQNLINVARRKLLEQSSNLAAEP 250 (680)
Q Consensus 218 ~~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~ 250 (680)
.+|..+. .++. .+.+++|++.+.+
T Consensus 265 -~lp~~~~------~~L~--~L~Ls~N~l~~~~ 288 (310)
T 4glp_A 265 -QVPKGLP------AKLR--VLDLSSNRLNRAP 288 (310)
T ss_dssp -SCCSCCC------SCCS--CEECCSCCCCSCC
T ss_pred -chhhhhc------CCCC--EEECCCCcCCCCc
Confidence 4555442 1122 4556777777643
No 328
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.47 E-value=2.2e-13 Score=144.82 Aligned_cols=142 Identities=19% Similarity=0.155 Sum_probs=120.7
Q ss_pred ceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccC-CCCCCCEEEccCCcCCccCccccCCC
Q 005734 64 SGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELG-ELTKLELLDLSNNKLSGIIPVEISRL 142 (680)
Q Consensus 64 ~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l 142 (680)
..-.|.. +.+++++++|+. +|..+. ..++.|+|++|+|++..+..+. .+++|+.|+|++|++++..|..|..+
T Consensus 14 ~~C~C~~---~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l 87 (361)
T 2xot_A 14 ANCLCAS---NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPV 87 (361)
T ss_dssp TTCEEET---TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCCEECC---CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCC
Confidence 4556653 478999999984 676554 4689999999999988788887 99999999999999998777889999
Q ss_pred CCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcch
Q 005734 143 PSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSET 222 (680)
Q Consensus 143 ~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~ 222 (680)
++|++|+|++|++++..+..|..+++|+.|+|++|.+++..|. .|..+..++.|+++.|+|++..+.
T Consensus 88 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~-------------~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 88 PNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRN-------------AFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT-------------TTTTCTTCCEEECCSSCCCSCCGG
T ss_pred CCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHH-------------HhCCcccCCEEECCCCcCCeeCHH
Confidence 9999999999999987777899999999999999999876554 466677888999999999986655
Q ss_pred hh
Q 005734 223 HL 224 (680)
Q Consensus 223 ~~ 224 (680)
.+
T Consensus 155 ~~ 156 (361)
T 2xot_A 155 LI 156 (361)
T ss_dssp GT
T ss_pred Hh
Confidence 44
No 329
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=3.3e-13 Score=127.19 Aligned_cols=108 Identities=20% Similarity=0.287 Sum_probs=93.8
Q ss_pred eEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCC
Q 005734 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153 (680)
Q Consensus 74 ~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 153 (680)
+.+++++|.++. +|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 356677788774 676653 89999999999999988999999999999999999999766667899999999999999
Q ss_pred cccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 154 KFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 154 ~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
++++..|..|..+++|++|+|++|.++...+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9997666679999999999999999887654
No 330
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.45 E-value=1.8e-13 Score=152.78 Aligned_cols=112 Identities=21% Similarity=0.254 Sum_probs=74.0
Q ss_pred cEeEEEcCCCCCcccCCccc-----CCCCCCCEEEccCccCcccCCc-c-------------------------cCCCCC
Q 005734 72 KVQMLDMKERSLEGTLAPDL-----GKLSDLRFLVLQKNHFSGVIPK-E-------------------------LGELTK 120 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~-----~~l~~L~~L~L~~N~l~g~~p~-~-------------------------~~~l~~ 120 (680)
+++.|++++|.++|.+|..+ +.++.|+.+++++|.+ .+|. . +..+++
T Consensus 248 ~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~ 325 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISP 325 (520)
T ss_dssp SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCC
T ss_pred cccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCc
Confidence 67777777777777777766 5555555555555554 2331 0 156677
Q ss_pred CCEEEccCCcCCccCccccCCCCCCcEEEccCCcccc--cCChhhcCCCCCCeeeccCcccccccCC
Q 005734 121 LELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEG--SIPLELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 121 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~P~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
|++|+|++|++++.+|..++.+++|+.|+|++|++++ .+|..++.+++|++|++++|.+++.+|.
T Consensus 326 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~ 392 (520)
T 2z7x_B 326 FLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKK 392 (520)
T ss_dssp CCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGG
T ss_pred ccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccccc
Confidence 7777777777776677777777777777777777775 5556677777777777777777665554
No 331
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.45 E-value=9.3e-14 Score=147.16 Aligned_cols=115 Identities=22% Similarity=0.237 Sum_probs=102.1
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCcc--ccCCCCCCcE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPV--EISRLPSLKR 147 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~ 147 (680)
..+++.|+|++|.+++..|..++.+++|++|+|++|.+++..+..+.++++|++|+|++|+++ .+|. .+..+++|++
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 468999999999999888888999999999999999999655555999999999999999999 4665 7899999999
Q ss_pred EEccCC-cccccCChhhcCCCCCCeeeccCcccccccCC
Q 005734 148 LLLGNN-KFEGSIPLELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 148 L~L~~N-~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
|++++| .+.+..|..++++++|+.|++++|.+++..|.
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 192 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPK 192 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHH
Confidence 999999 47766677899999999999999999887665
No 332
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.45 E-value=1.7e-13 Score=154.61 Aligned_cols=93 Identities=18% Similarity=0.209 Sum_probs=53.1
Q ss_pred CCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCc--cCccccCCCCCCcEEEccCCcccccCChh-hcCCCC
Q 005734 92 GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG--IIPVEISRLPSLKRLLLGNNKFEGSIPLE-LSRFTL 168 (680)
Q Consensus 92 ~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~P~~-l~~l~~ 168 (680)
..+++|++|++++|.+++.+|..++.+++|+.|+|++|++++ .+|..+..+++|+.|++++|.+++.+|.. +..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 445556666666666665555556666666666666666654 22344555666666666666665544443 455556
Q ss_pred CCeeeccCcccccccC
Q 005734 169 LSELQFDDYLTSAEVA 184 (680)
Q Consensus 169 L~~L~l~~N~~~g~~p 184 (680)
|+.|++++|.+++.+|
T Consensus 430 L~~L~l~~n~l~~~~~ 445 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVF 445 (562)
T ss_dssp CCEEECCSSCCCGGGG
T ss_pred CCEEECCCCCCCcchh
Confidence 6666666666555444
No 333
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.45 E-value=3e-13 Score=148.32 Aligned_cols=174 Identities=20% Similarity=0.150 Sum_probs=131.0
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+..|.++++|++|+|++|.|++..+..|..+++|++|+|++|++++..+..+.++++|+.|+
T Consensus 98 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 36899999999999998888999999999999999999977777799999999999999999976666888899999999
Q ss_pred ccCCcccccCCh-hhcCCCCCCeeeccCcccccccCCcccc---------ccccCCc-ccccCCCCCCcccCCCCCCCCC
Q 005734 150 LGNNKFEGSIPL-ELSRFTLLSELQFDDYLTSAEVAGIRSV---------NRKFGQY-GFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 150 L~~N~l~g~~P~-~l~~l~~L~~L~l~~N~~~g~~p~~~~~---------~~~~~~~-~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
|++|+..+.+|. .+..+++|++|++++|.+++. |..... .+.+... +..|..+..++.++++.|++++
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 988544445554 588888999999998888753 432111 1111111 2456777888889999999988
Q ss_pred CcchhhhhhhhhhhhHHhhhhhhcccccCCCC
Q 005734 219 SSETHLVQHSQNLINVARRKLLEQSSNLAAEP 250 (680)
Q Consensus 219 ~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~ 250 (680)
..+..+. .+.++. .+.+++|++...+
T Consensus 257 ~~~~~~~----~l~~L~--~L~L~~N~l~~~~ 282 (452)
T 3zyi_A 257 IERNAFD----GLASLV--ELNLAHNNLSSLP 282 (452)
T ss_dssp ECTTTTT----TCTTCC--EEECCSSCCSCCC
T ss_pred ECHHHhc----CCCCCC--EEECCCCcCCccC
Confidence 7776655 222222 3445667766544
No 334
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.45 E-value=3.6e-13 Score=147.13 Aligned_cols=174 Identities=18% Similarity=0.169 Sum_probs=129.2
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+
T Consensus 87 l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 166 (440)
T 3zyj_A 87 LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLD 166 (440)
T ss_dssp CSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeC
Confidence 36899999999999988888899999999999999999976667899999999999999999976667888899999999
Q ss_pred ccCCcccccCCh-hhcCCCCCCeeeccCcccccccCCcccc---------ccccCCc-ccccCCCCCCcccCCCCCCCCC
Q 005734 150 LGNNKFEGSIPL-ELSRFTLLSELQFDDYLTSAEVAGIRSV---------NRKFGQY-GFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 150 L~~N~l~g~~P~-~l~~l~~L~~L~l~~N~~~g~~p~~~~~---------~~~~~~~-~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
|++|+..+.+|. .|.++++|++|++++|.++ .+|..... .+.+... ...|..+..++.++++.|++++
T Consensus 167 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 245 (440)
T 3zyj_A 167 LGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV 245 (440)
T ss_dssp CCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred CCCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeE
Confidence 988554445554 6888888999998888887 34542111 0111111 2456777888889999999988
Q ss_pred CcchhhhhhhhhhhhHHhhhhhhcccccCCCC
Q 005734 219 SSETHLVQHSQNLINVARRKLLEQSSNLAAEP 250 (680)
Q Consensus 219 ~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~ 250 (680)
..+..+. .+.++. .+.+++|++...+
T Consensus 246 ~~~~~~~----~l~~L~--~L~L~~N~l~~~~ 271 (440)
T 3zyj_A 246 IERNAFD----NLQSLV--EINLAHNNLTLLP 271 (440)
T ss_dssp ECTTSST----TCTTCC--EEECTTSCCCCCC
T ss_pred EChhhhc----CCCCCC--EEECCCCCCCccC
Confidence 7776554 222222 3445666666544
No 335
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.45 E-value=1.2e-13 Score=152.49 Aligned_cols=115 Identities=21% Similarity=0.237 Sum_probs=105.6
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..+..+++|+.|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 46899999999999998899999999999999999999976666789999999999999999998899999999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
|++|.+++..|..|.++++|+.|++++|.+++..+
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 99999998888899999999999999999886443
No 336
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.45 E-value=2e-14 Score=166.63 Aligned_cols=141 Identities=19% Similarity=0.185 Sum_probs=121.6
Q ss_pred CCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 69 LNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 69 ~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
....|+.|+|++|.+. .+|..++.+++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|+.|++|++|
T Consensus 222 ~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred cCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 3468999999999998 78888899999999999999999 89999999999999999999999 899999999999999
Q ss_pred EccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 149 LLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 149 ~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
+|++|.|+ .+|..|+.+++|++|+|++|.+++.+|........ ....++++.|.+++.+|..+.
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~------------~~~~l~l~~N~l~~~~p~~l~ 362 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSV------------TGLIFYLRDNRPEIPLPHERR 362 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHH------------HHHHHHHHHCCCCCCCCCC--
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcch------------hhhHHhhccCcccCcCccccc
Confidence 99999998 89999999999999999999999988873221100 011256788999998887665
No 337
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.45 E-value=2.2e-13 Score=131.63 Aligned_cols=131 Identities=19% Similarity=0.145 Sum_probs=110.4
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|++++|.+. .++.+..+++|++|++++|.+++..|..++.+++|++|+|++|++++..|..+..+++|++|+
T Consensus 65 l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 65 AHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp CTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 358999999999665 345789999999999999999988899999999999999999999988899999999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
+++|.+.+.+| .+..+++|+.|++++|.+++ ++ .+..+..++.+++++|++.+
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~--------------~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR--------------GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT--------------TGGGCSSCCEEEECBC----
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH--------------HhccCCCCCEEEeeCcccCC
Confidence 99998444677 69999999999999999875 22 23455677888999998754
No 338
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.45 E-value=1.3e-13 Score=152.50 Aligned_cols=29 Identities=7% Similarity=-0.019 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHcCCCCcccceeeEEecCC
Q 005734 429 MAYRKQVDTLSRINHKNFVNLIGYCEDDE 457 (680)
Q Consensus 429 ~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 457 (680)
++|..|++++++++|+|+|+++|||....
T Consensus 324 ~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 324 ETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 46999999999999999999999998765
No 339
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.44 E-value=8.8e-13 Score=138.34 Aligned_cols=189 Identities=18% Similarity=0.168 Sum_probs=134.8
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..|..++.+++|++|+|++|.++ .+|..+. ++|++|+|++|++++..+..+..+++|+.|+
T Consensus 77 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 153 (332)
T 2ft3_A 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIE 153 (332)
T ss_dssp CTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEE
T ss_pred CCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEE
Confidence 468999999999999988999999999999999999998 6777665 8999999999999976666799999999999
Q ss_pred ccCCccc--ccCChhhcCCCCCCeeeccCcccccccCCcccc--------ccccCCcc-cccCCCCCCcccCCCCCCCCC
Q 005734 150 LGNNKFE--GSIPLELSRFTLLSELQFDDYLTSAEVAGIRSV--------NRKFGQYG-FKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 150 L~~N~l~--g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~--------~~~~~~~~-~~~~~~~~~~~l~~s~n~l~~ 218 (680)
+++|.++ +..|..+..+ +|+.|++++|.+++ +|..... .+.+.... ..+..+..++.++++.|++++
T Consensus 154 l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~ 231 (332)
T 2ft3_A 154 MGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM 231 (332)
T ss_dssp CCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCC
T ss_pred CCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCc
Confidence 9999996 4778888888 99999999999886 4431110 11111111 345666777778888888877
Q ss_pred CcchhhhhhhhhhhhHHhhhhhhcccccCCCCCCCCC-CCccccccCCCCCC
Q 005734 219 SSETHLVQHSQNLINVARRKLLEQSSNLAAEPATVGS-SSDQVIALPTSRSS 269 (680)
Q Consensus 219 ~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~~~~-~~~~~~~~~~~~~~ 269 (680)
..+..+. .+.++. .+.++.|++...+..... ..++..++..|..+
T Consensus 232 ~~~~~~~----~l~~L~--~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l~ 277 (332)
T 2ft3_A 232 IENGSLS----FLPTLR--ELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNIT 277 (332)
T ss_dssp CCTTGGG----GCTTCC--EEECCSSCCCBCCTTGGGCTTCCEEECCSSCCC
T ss_pred CChhHhh----CCCCCC--EEECCCCcCeecChhhhcCccCCEEECCCCCCC
Confidence 6665544 112222 334455666544332211 12344455555433
No 340
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.43 E-value=2.4e-13 Score=151.84 Aligned_cols=177 Identities=20% Similarity=0.159 Sum_probs=119.4
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCc--cCccccCCCCCCcEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG--IIPVEISRLPSLKRL 148 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L 148 (680)
.+++.|++++|.+.+.. .+..+++|++|++++|.+++.+|..++.+++|++|+|++|++++ .+|..+..+++|++|
T Consensus 302 ~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L 379 (520)
T 2z7x_B 302 MNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQL 379 (520)
T ss_dssp CCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEE
T ss_pred CceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEE
Confidence 45888888888876432 12677888888888888888888888888888888888888886 566778888888888
Q ss_pred EccCCcccccCChh-hcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhh
Q 005734 149 LLGNNKFEGSIPLE-LSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQH 227 (680)
Q Consensus 149 ~L~~N~l~g~~P~~-l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~ 227 (680)
++++|.+++.+|.. +..+++|+.|++++|.+++.+|.. +. ..++.++++.|+++ .+|..+.
T Consensus 380 ~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-------------l~--~~L~~L~Ls~N~l~-~ip~~~~-- 441 (520)
T 2z7x_B 380 DISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRC-------------LP--PRIKVLDLHSNKIK-SIPKQVV-- 441 (520)
T ss_dssp ECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGS-------------CC--TTCCEEECCSSCCC-CCCGGGG--
T ss_pred ECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhh-------------hc--ccCCEEECCCCccc-ccchhhh--
Confidence 88888888767764 777888888888888888766641 11 34556777777776 4444433
Q ss_pred hhhhhhHHhhhhhhcccccCCCCCC-CC-CCCccccccCCCCCCCC
Q 005734 228 SQNLINVARRKLLEQSSNLAAEPAT-VG-SSSDQVIALPTSRSSGT 271 (680)
Q Consensus 228 ~~~~~~l~~~~l~~~~n~l~~~~~~-~~-~~~~~~~~~~~~~~~g~ 271 (680)
.+.++. .+.+++|++...+.. .. ...++..++..|..++.
T Consensus 442 --~l~~L~--~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 442 --KLEALQ--ELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp --GCTTCC--EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred --cCCCCC--EEECCCCcCCccCHHHhccCCcccEEECcCCCCccc
Confidence 111222 333455666544332 11 11244455566655443
No 341
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=6.2e-13 Score=125.85 Aligned_cols=107 Identities=19% Similarity=0.274 Sum_probs=93.8
Q ss_pred eEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCC
Q 005734 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153 (680)
Q Consensus 74 ~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 153 (680)
+.+++++|.++ .+|..+. +.|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57899999986 6777664 89999999999999988999999999999999999999755556789999999999999
Q ss_pred cccccCChhhcCCCCCCeeeccCccccccc
Q 005734 154 KFEGSIPLELSRFTLLSELQFDDYLTSAEV 183 (680)
Q Consensus 154 ~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~ 183 (680)
++++..+..|..+++|++|+|++|.+....
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 999655556999999999999999887543
No 342
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.43 E-value=1.3e-13 Score=137.47 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=116.5
Q ss_pred CCcEeEEEcCCCC-CcccCCcccCCCCCCCEEEccC-ccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCc-
Q 005734 70 NGKVQMLDMKERS-LEGTLAPDLGKLSDLRFLVLQK-NHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLK- 146 (680)
Q Consensus 70 ~~~l~~L~l~~~~-l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~- 146 (680)
..+++.|++++|. +++..+..|..+++|++|++++ |.+++..+..|.++++|++|+|++|++++ +|. +..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 3689999999997 8876666899999999999998 99998777889999999999999999996 887 88999998
Q ss_pred --EEEccCC-cccccCChhhcCCCCCC-eeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCC-CCCCcc
Q 005734 147 --RLLLGNN-KFEGSIPLELSRFTLLS-ELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCAN-LPGSSE 221 (680)
Q Consensus 147 --~L~L~~N-~l~g~~P~~l~~l~~L~-~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~-l~~~~~ 221 (680)
+|++++| .+++..+..|.++++|+ .|++++|.++ .+|.. .+.. ..++.++++.|. +++..+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~------------~~~~-~~L~~L~L~~n~~l~~i~~ 197 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY------------AFNG-TKLDAVYLNKNKYLTVIDK 197 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT------------TTTT-CEEEEEECTTCTTCCEECT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh------------hcCC-CCCCEEEcCCCCCcccCCH
Confidence 9999999 99976667799999999 9999999998 66652 1222 456678888884 876555
Q ss_pred hhhh
Q 005734 222 THLV 225 (680)
Q Consensus 222 ~~~~ 225 (680)
..+.
T Consensus 198 ~~~~ 201 (239)
T 2xwt_C 198 DAFG 201 (239)
T ss_dssp TTTT
T ss_pred HHhh
Confidence 4444
No 343
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.43 E-value=6.3e-13 Score=153.44 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=84.1
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCC-cccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP-KELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.++.|++++|.+++..|..+..+++|++|+|++|.+++.+| ..+..+++|++|+|++|++++..|..+..+++|+.|++
T Consensus 382 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l 461 (680)
T 1ziw_A 382 PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLML 461 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEEC
T ss_pred cCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchh
Confidence 56777777777877777778888888888888888877666 56778888888888888877666666777777777777
Q ss_pred cCCccc--ccCChhhcCCCCCCeeeccCcccccccC
Q 005734 151 GNNKFE--GSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 151 ~~N~l~--g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
++|.++ +.+|..++++++|+.|++++|.+++..|
T Consensus 462 ~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~ 497 (680)
T 1ziw_A 462 RRVALKNVDSSPSPFQPLRNLTILDLSNNNIANIND 497 (680)
T ss_dssp TTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCT
T ss_pred ccccccccccCCcccccCCCCCEEECCCCCCCcCCh
Confidence 777665 4566777777777777777777765444
No 344
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.40 E-value=6e-13 Score=150.13 Aligned_cols=142 Identities=15% Similarity=0.140 Sum_probs=120.9
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCC-cccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP-KELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
..+++.|++++|.+.+..+ .+..+++|++|++++|.+.+..| ..+..+++|++|+|++|.+++..|..+..+++|+.|
T Consensus 372 ~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 372 TTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp CSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred cCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 3689999999999986544 48999999999999999988766 568899999999999999998889899999999999
Q ss_pred EccCCccc-ccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 149 LLGNNKFE-GSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 149 ~L~~N~l~-g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++++|.++ +.+|..++.+++|+.|++++|.+++..|. .+..+..++.+++++|++++.++..+.
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~l~~n~l~~~~~~~~~ 515 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT-------------AFNSLSSLQVLNMASNQLKSVPDGIFD 515 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT-------------TTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChh-------------hhhcccCCCEEeCCCCcCCCCCHHHhh
Confidence 99999997 67899999999999999999999887665 345566777888888888887776655
No 345
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.40 E-value=6.2e-13 Score=150.02 Aligned_cols=135 Identities=17% Similarity=0.187 Sum_probs=113.4
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcc--cCCcccCCCCCCCEEEccCCcCCccCccc-cCCCCCCc
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSG--VIPKELGELTKLELLDLSNNKLSGIIPVE-ISRLPSLK 146 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~ 146 (680)
..+++.|++++|.+++.+|..++.+++|++|+|++|++++ .+|..+..+++|+.|+|++|++++.+|.. +..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 4689999999999999999999999999999999999997 34577999999999999999999867764 78899999
Q ss_pred EEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCc
Q 005734 147 RLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSS 220 (680)
Q Consensus 147 ~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~ 220 (680)
.|+|++|.+++.+|..+. ++|+.|++++|.++ .+|. .+..+..++.++++.|++++..
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~-------------~~~~l~~L~~L~L~~N~l~~l~ 489 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPK-------------DVTHLQALQELNVASNQLKSVP 489 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCT-------------TTTSSCCCSEEECCSSCCCCCC
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccCh-------------hhcCCCCCCEEECCCCCCCCCC
Confidence 999999999988877654 78999999999888 4554 2235566777888888887533
No 346
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.39 E-value=6.9e-13 Score=149.10 Aligned_cols=109 Identities=28% Similarity=0.375 Sum_probs=100.7
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
.++.|+|++|.|++ +|. ++.+++|+.|+|++|.|+ .+|..++.+++|+.|+|++|+|++ +| .++.|++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 57899999999997 665 999999999999999999 889999999999999999999996 78 89999999999999
Q ss_pred CCcccccC-ChhhcCCCCCCeeeccCcccccccCC
Q 005734 152 NNKFEGSI-PLELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 152 ~N~l~g~~-P~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
+|++++.. |..++.+++|+.|+|++|.+++.+|.
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99999876 99999999999999999999987665
No 347
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.39 E-value=1e-12 Score=137.66 Aligned_cols=174 Identities=19% Similarity=0.239 Sum_probs=120.9
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCC--ccCccccCCCCCCcEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS--GIIPVEISRLPSLKRL 148 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L 148 (680)
.+++.|+|++|.++ .+|..+. ++|++|++++|.+++..+..+.++++|+.|+|++|.++ +..|..+..+++|++|
T Consensus 100 ~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L 176 (330)
T 1xku_A 100 VKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 176 (330)
T ss_dssp TTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEE
T ss_pred CCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEE
Confidence 57899999999988 5666554 78999999999998777777888999999999999885 3677788888899999
Q ss_pred EccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhh
Q 005734 149 LLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHS 228 (680)
Q Consensus 149 ~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~ 228 (680)
++++|.++ .+|..+. ++|+.|++++|.+++..|. .+..+..++.++++.|++++..+..+.
T Consensus 177 ~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~--- 237 (330)
T 1xku_A 177 RIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAA-------------SLKGLNNLAKLGLSFNSISAVDNGSLA--- 237 (330)
T ss_dssp ECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTG-------------GGTTCTTCCEEECCSSCCCEECTTTGG---
T ss_pred ECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHH-------------HhcCCCCCCEEECCCCcCceeChhhcc---
Confidence 99988888 4676554 7888888888888765543 344556677777888877776654443
Q ss_pred hhhhhHHhhhhhhcccccCCCCCCCCC-CCccccccCCCCCC
Q 005734 229 QNLINVARRKLLEQSSNLAAEPATVGS-SSDQVIALPTSRSS 269 (680)
Q Consensus 229 ~~~~~l~~~~l~~~~n~l~~~~~~~~~-~~~~~~~~~~~~~~ 269 (680)
.+.++. .+.+++|++...+..... ..++..++..|..+
T Consensus 238 -~l~~L~--~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~ 276 (330)
T 1xku_A 238 -NTPHLR--ELHLNNNKLVKVPGGLADHKYIQVVYLHNNNIS 276 (330)
T ss_dssp -GSTTCC--EEECCSSCCSSCCTTTTTCSSCCEEECCSSCCC
T ss_pred -CCCCCC--EEECCCCcCccCChhhccCCCcCEEECCCCcCC
Confidence 111222 334455666544332221 12445555555444
No 348
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.39 E-value=1.2e-12 Score=149.41 Aligned_cols=140 Identities=18% Similarity=0.174 Sum_probs=66.7
Q ss_pred cEeEEEcCCCCCcccCC-cccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCC-ccCccccCCCCCCcEEE
Q 005734 72 KVQMLDMKERSLEGTLA-PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS-GIIPVEISRLPSLKRLL 149 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~ 149 (680)
.++.+++..++.....+ ..+..+..++.++++.|.+.+..|..+..+++|+.|+|++|.+. +.+|..+..+++|++|+
T Consensus 421 ~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~ 500 (635)
T 4g8a_A 421 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 500 (635)
T ss_dssp TCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEE
Confidence 44555555444443332 23444555555555555555444444555555555555555422 23344445555555555
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhh
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHL 224 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~ 224 (680)
|++|++++..|..|+++++|++|+|++|++++..|. .|..+..++.++++.|+|++.+|..+
T Consensus 501 Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~-------------~~~~l~~L~~L~Ls~N~l~~~~~~~l 562 (635)
T 4g8a_A 501 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF-------------PYKCLNSLQVLDYSLNHIMTSKKQEL 562 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCG-------------GGTTCTTCCEEECTTSCCCBCCSSCT
T ss_pred CCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChh-------------HHhCCCCCCEEECCCCcCCCCCHHHH
Confidence 555555544444555555555555555554443332 23333444445555555555444444
No 349
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.37 E-value=2.9e-13 Score=141.11 Aligned_cols=131 Identities=22% Similarity=0.176 Sum_probs=89.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+++..|..+..+++|++|+|++|.+++..| +..+++|++|+|++|++++ +| .+++|+.|++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~-l~----~~~~L~~L~l 106 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----VGPSIETLHA 106 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEE-EE----ECTTCCEEEC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccc-cc----CCCCcCEEEC
Confidence 367888888888887766778888888888888888876544 7788888888888888874 33 2367777777
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHL 224 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~ 224 (680)
++|.+++..+. .+++|+.|++++|.+++..|. .+..+..++.++++.|++++..+..+
T Consensus 107 ~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~-------------~~~~l~~L~~L~Ls~N~l~~~~~~~~ 164 (317)
T 3o53_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDL-------------DEGCRSRVQYLDLKLNEIDTVNFAEL 164 (317)
T ss_dssp CSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGB-------------CTGGGSSEEEEECTTSCCCEEEGGGG
T ss_pred CCCccCCcCcc---ccCCCCEEECCCCCCCCccch-------------hhhccCCCCEEECCCCCCCcccHHHH
Confidence 77777754333 356677777777777664443 23334455666666666666555444
No 350
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.37 E-value=2.6e-13 Score=152.47 Aligned_cols=116 Identities=22% Similarity=0.290 Sum_probs=106.4
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCc-cCccccCCCCCCcEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG-IIPVEISRLPSLKRL 148 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L 148 (680)
..++++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|++++ .+|..++++++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 4689999999999999888899999999999999999998877789999999999999999996 467889999999999
Q ss_pred EccCCcccccCC-hhhcCCCCCCeeeccCcccccccCC
Q 005734 149 LLGNNKFEGSIP-LELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 149 ~L~~N~l~g~~P-~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
++++|.+.+.+| ..++++++|++|++++|.+++.+|.
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 999999666676 5799999999999999999988776
No 351
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.37 E-value=2.2e-12 Score=133.91 Aligned_cols=128 Identities=20% Similarity=0.267 Sum_probs=81.4
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+.+..+ +..+++|++|+|++|.+++ +| .+..+++|+.|+|++|++++ +|. +..+++|+.|++
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 466777777777764333 6777777777777777764 33 56677777777777777764 443 667777777777
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
++|.+++ +|. ++.+++|+.|++++|.+++..+ +..+..++.++++.|++++..+
T Consensus 137 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~---------------l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 137 DLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP---------------LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp CSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG---------------GTTCTTCCEEECCSSCCCCCGG
T ss_pred CCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh---------------hcCCCCCCEEECCCCccCcChh
Confidence 7777764 333 6677777777777776654211 3344555666666666665443
No 352
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.35 E-value=1.4e-12 Score=135.90 Aligned_cols=136 Identities=17% Similarity=0.115 Sum_probs=66.6
Q ss_pred EeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccC-CCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELG-ELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 73 l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
++.|++++|.+++..+..++.+++|++|+|++|.+++..|..+. .+++|++|+|++|++++. |. ...+++|+.|+|+
T Consensus 122 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls 199 (317)
T 3o53_A 122 KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLS 199 (317)
T ss_dssp CEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECC
T ss_pred CCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECC
Confidence 44444444444444444444445555555555555444444332 345555555555555422 22 2234555555555
Q ss_pred CCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC-CCcchhhh
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP-GSSETHLV 225 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~-~~~~~~~~ 225 (680)
+|.+++ +|..+..+++|+.|++++|.++. +|. .+..+..++.+++++|++. +.+|..+.
T Consensus 200 ~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~-------------~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 200 SNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEK-------------ALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp SSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECT-------------TCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred CCcCCc-chhhhcccCcccEEECcCCcccc-hhh-------------HhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 555553 33335555555555555555442 222 3445566777788888877 44444433
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.35 E-value=3e-12 Score=131.78 Aligned_cols=102 Identities=21% Similarity=0.315 Sum_probs=51.9
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
+++.|++++|.+... +.+..+++|++|+|++|.+++. +. +..+++|+.|+|++|++++ +| .+..+++|++|+|+
T Consensus 47 ~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 47 SIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLE 120 (291)
T ss_dssp TCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECT
T ss_pred cccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECC
Confidence 445555555555432 2245555555555555555532 22 5555555555555555553 22 25555555555555
Q ss_pred CCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
+|.+++ + ..+..+++|+.|++++|.+++
T Consensus 121 ~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~ 148 (291)
T 1h6t_A 121 HNGISD-I-NGLVHLPQLESLYLGNNKITD 148 (291)
T ss_dssp TSCCCC-C-GGGGGCTTCCEEECCSSCCCC
T ss_pred CCcCCC-C-hhhcCCCCCCEEEccCCcCCc
Confidence 555553 2 235555555555555555543
No 354
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.35 E-value=4.4e-12 Score=131.59 Aligned_cols=169 Identities=19% Similarity=0.205 Sum_probs=127.0
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+++++.+.. ++ .+..+++|++|+|++|.+++ +|. +..+++|++|+|++|++++ +| .+..+++|+.|+|
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 478999999999985 44 68999999999999999996 444 9999999999999999995 55 6999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQN 230 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~ 230 (680)
++|.+++ +|. +..+++|++|++++|.+++..+ +..+..++.++++.|++++..+ +. .
T Consensus 115 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~---------------l~~l~~L~~L~l~~n~l~~~~~--l~----~ 171 (308)
T 1h6u_A 115 TSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP---------------LAGLTNLQYLSIGNAQVSDLTP--LA----N 171 (308)
T ss_dssp TTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG---------------GGGCTTCCEEECCSSCCCCCGG--GT----T
T ss_pred CCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc---------------ccCCCCccEEEccCCcCCCChh--hc----C
Confidence 9999996 554 9999999999999999876322 3456678889999999987554 33 2
Q ss_pred hhhHHhhhhhhcccccCCCCCCCCCCCccccccCCCCCCC
Q 005734 231 LINVARRKLLEQSSNLAAEPATVGSSSDQVIALPTSRSSG 270 (680)
Q Consensus 231 ~~~l~~~~l~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~g 270 (680)
+.++. .+.++.|++...+.-.....++..++..|..++
T Consensus 172 l~~L~--~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~ 209 (308)
T 1h6u_A 172 LSKLT--TLKADDNKISDISPLASLPNLIEVHLKNNQISD 209 (308)
T ss_dssp CTTCC--EEECCSSCCCCCGGGGGCTTCCEEECTTSCCCB
T ss_pred CCCCC--EEECCCCccCcChhhcCCCCCCEEEccCCccCc
Confidence 22222 344556666654432122234445555554443
No 355
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.35 E-value=8.1e-13 Score=121.43 Aligned_cols=114 Identities=20% Similarity=0.257 Sum_probs=100.1
Q ss_pred CCCCCCEEEccCccCc-ccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCe
Q 005734 93 KLSDLRFLVLQKNHFS-GVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSE 171 (680)
Q Consensus 93 ~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~ 171 (680)
..++|+.|++++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..++.+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 88999999999999999999999965 78999999999999999999889998999999999
Q ss_pred eeccCcccccc-cCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 172 LQFDDYLTSAE-VAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 172 L~l~~N~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
|++++|.+++. .+. .+..+..++.++++.|++++..+
T Consensus 93 L~ls~N~i~~~~~~~-------------~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 93 LNLSGNKIKDLSTIE-------------PLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp EECTTSCCCSHHHHG-------------GGGGCTTCCEEECTTCGGGGSTT
T ss_pred EECCCCcCCChHHHH-------------HHhhCCCCCEEeCcCCcccchHH
Confidence 99999998863 222 35566778889999999987665
No 356
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.34 E-value=1.5e-12 Score=123.27 Aligned_cols=132 Identities=19% Similarity=0.171 Sum_probs=104.2
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCC-CCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLS-DLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|++++|.++. +| .+..+. +|++|+|++|.|++. ..+..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 478999999999984 44 455555 999999999999975 6899999999999999999965445558999999999
Q ss_pred ccCCcccccCCh--hhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC
Q 005734 150 LGNNKFEGSIPL--ELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 150 L~~N~l~g~~P~--~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
|++|.++ .+|. .++.+++|+.|++++|.++. +|... ...+..+..++.++++.|.+.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~---------~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYR---------LYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHH---------HHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHH---------HHHHHHCCccceeCCCcCCHH
Confidence 9999996 5776 79999999999999999873 34310 002344566777888777653
No 357
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=2.7e-12 Score=135.50 Aligned_cols=109 Identities=25% Similarity=0.312 Sum_probs=93.7
Q ss_pred CCccceeeeCCCcEeEEEcCCC-CCcccCCcccCCCCCCCEEEccC-ccCcccCCcccCCCCCCCEEEccCCcCCccCcc
Q 005734 60 PCLWSGVRCLNGKVQMLDMKER-SLEGTLAPDLGKLSDLRFLVLQK-NHFSGVIPKELGELTKLELLDLSNNKLSGIIPV 137 (680)
Q Consensus 60 ~c~w~gv~c~~~~l~~L~l~~~-~l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 137 (680)
.|.|..|.|. ++ +|+ .+|. +..+++|+.|+|++ |.|++..|..|.+|++|+.|+|++|+|++..|.
T Consensus 7 ~C~~~~v~~~----------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 7 PHGSSGLRCT----------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp CSSSSCEECC----------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred cccCCEEEcC----------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 4888777665 44 566 3787 99999999999996 999988888999999999999999999998899
Q ss_pred ccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 138 EISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 138 ~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
.|.+|++|+.|+|++|+|++..|..+..++ |+.|+|.+|.+..
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 999999999999999999965555566665 9999999998864
No 358
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.32 E-value=3.8e-12 Score=142.50 Aligned_cols=134 Identities=17% Similarity=0.202 Sum_probs=86.7
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.|+ .+| ..+++|++|+|++|.|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 46788888888887 566 456788888888888876 666 554 78888888888875 665 5677777777
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccc-------cccccCCcccccCCCCCC-------cccCCCCCCC
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRS-------VNRKFGQYGFKIGEDSLH-------TNGDHSCANL 216 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~-------~~~~~~~~~~~~~~~~~~-------~~l~~s~n~l 216 (680)
++|.+++ +|. .+++|+.|+|++|.+++ +|.+.. ..+.+..++. +.. ++ ..+++++|+|
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l~~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPELPESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRI 219 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCC
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCC-cchhhCCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcc
Confidence 7777775 665 45677777777777766 554210 0111222222 222 44 7788888888
Q ss_pred CCCcchhhh
Q 005734 217 PGSSETHLV 225 (680)
Q Consensus 217 ~~~~~~~~~ 225 (680)
+. +|..+.
T Consensus 220 ~~-lp~~l~ 227 (571)
T 3cvr_A 220 TH-IPENIL 227 (571)
T ss_dssp CC-CCGGGG
T ss_pred ee-cCHHHh
Confidence 75 555444
No 359
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.32 E-value=4.4e-12 Score=119.43 Aligned_cols=102 Identities=24% Similarity=0.323 Sum_probs=90.5
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEcc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS 127 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 127 (680)
+-|.|+.+.|.. ..++.|+|++|.+++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 7 C~C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 7 CSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp CEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 447888888853 468999999999999889999999999999999999997777778999999999999
Q ss_pred CCcCCccCccccCCCCCCcEEEccCCcccccCC
Q 005734 128 NNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIP 160 (680)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P 160 (680)
+|+|++..|..|..+++|++|+|++|.+++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999997666679999999999999999986543
No 360
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.32 E-value=2.2e-12 Score=141.51 Aligned_cols=138 Identities=18% Similarity=0.159 Sum_probs=90.3
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+++ +| ++.+++|+.|++++|.+++. .++.+++|+.|+|++|++++ +| ++.+++|+.|++
T Consensus 170 ~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l 240 (457)
T 3bz5_A 170 TQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDC 240 (457)
T ss_dssp TTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEEC
T ss_pred CcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEe
Confidence 568888888888886 44 77788888888888888764 37778888888888888886 66 777888888888
Q ss_pred cCCcccccCChhhcCCC-------CCCeeeccCcccccccCCcccc---------c----------cccCCcccccCCCC
Q 005734 151 GNNKFEGSIPLELSRFT-------LLSELQFDDYLTSAEVAGIRSV---------N----------RKFGQYGFKIGEDS 204 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~-------~L~~L~l~~N~~~g~~p~~~~~---------~----------~~~~~~~~~~~~~~ 204 (680)
++|++++..+..+.++. +|+.|++++|.+.|.+|..... + ..+.. ..+....
T Consensus 241 ~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~--L~l~~~~ 318 (457)
T 3bz5_A 241 SVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITE--LDLSQNP 318 (457)
T ss_dssp CSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEECTTCCCSC--CCCTTCT
T ss_pred eCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceeccCCCcceE--echhhcc
Confidence 88888765444444443 4455555555555555431100 0 00111 1344556
Q ss_pred CCcccCCCCCCCCCC
Q 005734 205 LHTNGDHSCANLPGS 219 (680)
Q Consensus 205 ~~~~l~~s~n~l~~~ 219 (680)
.++.++++.|++++.
T Consensus 319 ~L~~L~L~~N~l~~l 333 (457)
T 3bz5_A 319 KLVYLYLNNTELTEL 333 (457)
T ss_dssp TCCEEECTTCCCSCC
T ss_pred cCCEEECCCCccccc
Confidence 667777888888774
No 361
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.31 E-value=4e-12 Score=119.33 Aligned_cols=109 Identities=26% Similarity=0.231 Sum_probs=98.1
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCc--cccCCCCCCcE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIP--VEISRLPSLKR 147 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p--~~~~~l~~L~~ 147 (680)
..+++.|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+|++|++++ +| ..+..+++|++
T Consensus 48 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~ 124 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKS 124 (168)
T ss_dssp GGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCE
T ss_pred CCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCE
Confidence 46899999999999976 789999999999999999998889888889999999999999995 44 78999999999
Q ss_pred EEccCCcccccCC---hhhcCCCCCCeeeccCccccc
Q 005734 148 LLLGNNKFEGSIP---LELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 148 L~L~~N~l~g~~P---~~l~~l~~L~~L~l~~N~~~g 181 (680)
|++++|.+++..+ ..+..+++|++|++++|.+..
T Consensus 125 L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 125 LDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp EECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred EEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 9999999996554 479999999999999998764
No 362
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.30 E-value=1.9e-12 Score=141.82 Aligned_cols=46 Identities=11% Similarity=-0.000 Sum_probs=12.5
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCC
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGEL 118 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l 118 (680)
+++.|++++|.+ |.+|++++++++|++|++++|.+.|.+|..++++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l 57 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQ 57 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCC
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccc
Confidence 445555555555 4555555555555555555555555555544443
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.30 E-value=3.9e-12 Score=143.83 Aligned_cols=127 Identities=30% Similarity=0.363 Sum_probs=102.3
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+|+.|+|++|.+.+..| +..+++|+.|+|++|.|++ +| .+..+++|+.|+|++|++++ +| .+..|++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEE
Confidence 4678899999998886544 8888999999999999885 34 68888999999999999885 43 588889999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
|++|.+++. ..++.+++|+.|+|++|.+++..| +..+..|..|++++|+|++.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~---------------l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP---------------LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG---------------GTTCTTCCEEECCSSCCCBC
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchh---------------hccCCCCCEEECcCCCCCCC
Confidence 999998864 568888999999999998876544 34456677889999998874
No 364
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.28 E-value=1.6e-11 Score=134.54 Aligned_cols=104 Identities=17% Similarity=0.166 Sum_probs=93.5
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|++++|...+.+ .++.+++|+.|++++|++++ +| ++.+++|+.|++++|++++. .++.+++|+.|+
T Consensus 147 l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~ 218 (457)
T 3bz5_A 147 NTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLD 218 (457)
T ss_dssp CTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEE
T ss_pred CCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEE
Confidence 468999999999777776 48899999999999999997 56 89999999999999999964 389999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
+++|++++ +| ++.+++|+.|++++|.+++..+
T Consensus 219 Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~ 250 (457)
T 3bz5_A 219 CSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV 250 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC
T ss_pred CcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH
Confidence 99999997 77 8999999999999999998644
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.28 E-value=1.8e-11 Score=125.94 Aligned_cols=127 Identities=30% Similarity=0.361 Sum_probs=109.7
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ + +.+..+++|+.|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 4689999999999997544 9999999999999999986 34 59999999999999999996 4 4689999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
+++|.+++. ..++.+++|+.|++++|.+++..| +..+..++.++++.|++++.
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~---------------l~~l~~L~~L~L~~N~i~~l 193 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP---------------LAGLTKLQNLYLSKNHISDL 193 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG---------------GTTCTTCCEEECCSSCCCBC
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchh---------------hcCCCccCEEECCCCcCCCC
Confidence 999999964 579999999999999999886433 34566788899999999874
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.27 E-value=1e-11 Score=140.47 Aligned_cols=128 Identities=17% Similarity=0.240 Sum_probs=103.4
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..|+.|+|++|.+.. ++ .+..|++|+.|+|++|.|++..| +..+++|+.|+|++|.+++ +| .+..|++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 467888899888874 33 58889999999999999986544 8889999999999999985 44 6888999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
++|.+++ +| .+..+++|+.|+|++|.+++. + .+..+..|+.|+++.|++++..|
T Consensus 117 s~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l-~--------------~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 117 EHNGISD-IN-GLVHLPQLESLYLGNNKITDI-T--------------VLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp TTSCCCC-CG-GGGGCTTCSEEECCSSCCCCC-G--------------GGGSCTTCSEEECCSSCCCCCGG
T ss_pred cCCCCCC-Cc-cccCCCccCEEECCCCccCCc-h--------------hhcccCCCCEEECcCCcCCCchh
Confidence 9999985 43 588899999999999988753 2 34556778888999999988766
No 367
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.26 E-value=2e-11 Score=134.34 Aligned_cols=141 Identities=27% Similarity=0.347 Sum_probs=82.8
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+.+. +.+..+++|++|++++|.+.+..| ++.+++|+.|+|++|++++ ++ .+..+++|+.|++
T Consensus 177 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l 250 (466)
T 1o6v_A 177 TTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IG-TLASLTNLTDLDL 250 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEEC
T ss_pred CCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-ch-hhhcCCCCCEEEC
Confidence 4677777777776643 236667777777777777765444 5566677777777777663 33 4566666777777
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCcccc---------ccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSV---------NRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
++|.+++..| +..+++|+.|++++|.+++..+ .... .+.+... ..+..+..++.++++.|++++..|
T Consensus 251 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 251 ANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDI-SPISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCC-GGGGGCTTCSEEECCSSCCSCCGG
T ss_pred CCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCc-hhhcCCCCCCEEECcCCcCCCchh
Confidence 7776665433 6666667777776666655332 1000 0001111 123445566667777777776654
No 368
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.26 E-value=1.3e-11 Score=130.38 Aligned_cols=152 Identities=16% Similarity=0.080 Sum_probs=90.3
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCC-cccCCCCCCCE-EE
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP-KELGELTKLEL-LD 125 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~-L~ 125 (680)
|-|.|+.|.|.. .+++.|+|++|.|+...+..|.++++|++|+|++|.+.+.+| ..|.++++|.. +.
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 347899999963 246667777777764434456677777777777777655554 34566666554 45
Q ss_pred ccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCC-C
Q 005734 126 LSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGED-S 204 (680)
Q Consensus 126 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~-~ 204 (680)
++.|++++..|..|..+++|++|++++|.+++..+..+....++..|++.++.....+|.. .|..+ .
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~------------~f~~~~~ 154 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERN------------SFVGLSF 154 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTT------------SSTTSBS
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccccc------------chhhcch
Confidence 5566776555666667777777777777776544444555555666666554332333321 12222 2
Q ss_pred CCcccCCCCCCCCCCcch
Q 005734 205 LHTNGDHSCANLPGSSET 222 (680)
Q Consensus 205 ~~~~l~~s~n~l~~~~~~ 222 (680)
.+..++++.|+++...+.
T Consensus 155 ~l~~L~L~~N~i~~i~~~ 172 (350)
T 4ay9_X 155 ESVILWLNKNGIQEIHNS 172 (350)
T ss_dssp SCEEEECCSSCCCEECTT
T ss_pred hhhhhccccccccCCChh
Confidence 345677888888754433
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.25 E-value=2.5e-11 Score=122.85 Aligned_cols=125 Identities=24% Similarity=0.279 Sum_probs=102.4
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.++. ++ .+..+++|++|+|++|.|++. |. +..+++|+.|+|++|++++ +|... . ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEc
Confidence 578999999999884 45 688899999999999999864 44 8999999999999999985 55433 3 89999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
++|++++ +| .++.+++|+.|++++|.+++. + .+..+..++.++++.|++++.
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~--------------~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V--------------MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G--------------GGGGCTTCCEEECTTSCCCBC
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h--------------HHccCCCCCEEECCCCcCcch
Confidence 9999996 44 588999999999999988763 2 244566778889999998876
No 370
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.24 E-value=3.2e-11 Score=113.99 Aligned_cols=109 Identities=17% Similarity=0.177 Sum_probs=93.4
Q ss_pred CCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccC
Q 005734 97 LRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176 (680)
Q Consensus 97 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~ 176 (680)
-+.+++++|.+. .+|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999996 7888775 8999999999999988899999999999999999999975555679999999999999
Q ss_pred cccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 177 YLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 177 N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
|.+++..+. .|..+..++.++++.|++....+
T Consensus 91 N~l~~l~~~-------------~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRG-------------AFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTT-------------TTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHH-------------HhccccCCCEEEeCCCCcccccc
Confidence 999864433 35667788889999999986543
No 371
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.24 E-value=5.7e-11 Score=130.07 Aligned_cols=134 Identities=22% Similarity=0.314 Sum_probs=97.7
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+++ +|.. .++|++|++++|.+++ +| .++++++|++|++++|++++ +|..+ .+|++|++
T Consensus 111 ~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 456777777776664 2221 1689999999999996 78 59999999999999999995 77644 58999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccc-------cccccCCcccccCCCCCCcccCCCCCCCCC
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRS-------VNRKFGQYGFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~-------~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
++|.+++ +| .++++++|++|++++|.+++ +|.... ..+.+..++ .+..+..++.++++.|++++
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLPLSLESIVAGNNILEELP-ELQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCCTTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCcCcccEEECcCCcCCccc-ccCCCCCCCEEECCCCcCCc
Confidence 9999996 77 68999999999999999887 443211 011222222 35566667777777777775
No 372
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.24 E-value=1e-11 Score=139.49 Aligned_cols=108 Identities=20% Similarity=0.232 Sum_probs=83.7
Q ss_pred CCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeecc
Q 005734 96 DLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFD 175 (680)
Q Consensus 96 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~ 175 (680)
.|+.|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|..++.|++|+.|+|++|.+++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 46778888888875 665 888888888888888888 778888888888888888888885 67 78888888888888
Q ss_pred Cccccccc-CCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 176 DYLTSAEV-AGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 176 ~N~~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
+|.+++.+ |. .+..+..+..+++++|++++.+|
T Consensus 517 ~N~l~~~~~p~-------------~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQ-------------PLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTG-------------GGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcH-------------HHhcCCCCCEEEecCCcCCCCcc
Confidence 88887765 54 34556677778888888877655
No 373
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.24 E-value=1.7e-11 Score=134.87 Aligned_cols=107 Identities=29% Similarity=0.352 Sum_probs=87.9
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|++++|.+.+. +.+..+++|+.|++++|.+++..| +..+++|+.|+|++|.+++. |. +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEE
Confidence 35788999999988753 457888999999999999986544 88899999999999999854 44 88899999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
+++|.+++..| ++.+++|+.|++++|.+++..|
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh
Confidence 99999986443 7888999999999998887654
No 374
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.23 E-value=8.8e-12 Score=141.21 Aligned_cols=117 Identities=26% Similarity=0.384 Sum_probs=92.2
Q ss_pred CCCCCCCCCCCCCccceee--------eCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCC
Q 005734 49 VFSNWNKNDSTPCLWSGVR--------CLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTK 120 (680)
Q Consensus 49 ~l~~W~~~~~~~c~w~gv~--------c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~ 120 (680)
....|.. +.+||.|+|.. |...+++.|++++|+++ .+|..+. ++|++|+|++|.|+ .+|. .+++
T Consensus 11 ~w~~W~~-~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~ 82 (622)
T 3g06_A 11 VWSAWRR-AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPE 82 (622)
T ss_dssp HHHHHHH-TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTT
T ss_pred HHHHHHh-cCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCC
Confidence 3456753 34678997643 33456899999999998 7787665 79999999999998 5676 5789
Q ss_pred CCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 121 LELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 121 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
|++|+|++|+++ .+|. .+++|++|+|++|.+++ +|. .+++|+.|++++|.+++
T Consensus 83 L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~ 135 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS 135 (622)
T ss_dssp CCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc
Confidence 999999999998 5776 67889999999999885 665 56788888888888875
No 375
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.23 E-value=2.4e-11 Score=122.93 Aligned_cols=127 Identities=18% Similarity=0.172 Sum_probs=107.1
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+ +..+++|++|+|++|++++ +|... . ++|+.|+|++|++++ +| .+..+++|+.|+
T Consensus 62 l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 4689999999999997544 9999999999999999996 55433 3 999999999999996 55 599999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCc
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSS 220 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~ 220 (680)
|++|++++ +| .++.+++|+.|++++|.+++. + .+..+..++.+++++|++++..
T Consensus 135 Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~--------------~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 135 IRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-G--------------GLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp CTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-T--------------TSTTCCCCCEEEEEEEEEECCC
T ss_pred CCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-H--------------HhccCCCCCEEeCCCCcccCCc
Confidence 99999996 55 699999999999999999864 2 3455667788888888887653
No 376
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.22 E-value=1e-11 Score=117.60 Aligned_cols=107 Identities=18% Similarity=0.193 Sum_probs=95.1
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCcc--ccCCCCCCcEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPV--EISRLPSLKRL 148 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L 148 (680)
.+++.|+|++|.+++. +.++.+++|++|+|++|.|++..|..+..+++|++|+|++|+++ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999976 67999999999999999999755555699999999999999997 6776 88999999999
Q ss_pred EccCCcccccCChh----hcCCCCCCeeeccCccccc
Q 005734 149 LLGNNKFEGSIPLE----LSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 149 ~L~~N~l~g~~P~~----l~~l~~L~~L~l~~N~~~g 181 (680)
++++|.++ .+|.. +..+++|+.|++++|....
T Consensus 119 ~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 119 CILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp ECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 99999998 57775 8999999999999987653
No 377
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.22 E-value=3.4e-11 Score=126.80 Aligned_cols=103 Identities=25% Similarity=0.400 Sum_probs=70.1
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+.+..+ +..+++|+.|++++|.+.+ ++. +..+++|+.|++++|.+++..+ +..+++|+.|++
T Consensus 155 ~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l 228 (347)
T 4fmz_A 155 TGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKI 228 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEc
Confidence 467777887777765433 6777777777777777764 333 6677777777777777764333 666777777777
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
++|.+++ +|. +..+++|+.|++++|.+++
T Consensus 229 ~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~ 257 (347)
T 4fmz_A 229 GNNKITD-LSP-LANLSQLTWLEIGTNQISD 257 (347)
T ss_dssp CSSCCCC-CGG-GTTCTTCCEEECCSSCCCC
T ss_pred cCCccCC-Ccc-hhcCCCCCEEECCCCccCC
Confidence 7777764 333 6677777777777776654
No 378
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.21 E-value=2.2e-12 Score=135.35 Aligned_cols=108 Identities=23% Similarity=0.299 Sum_probs=95.9
Q ss_pred CcEeEEEcCCCCCccc-CCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCC-cCCcc-CccccCCCCCCcE
Q 005734 71 GKVQMLDMKERSLEGT-LAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNN-KLSGI-IPVEISRLPSLKR 147 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~ 147 (680)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. +|..+..+++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5799999999998876 7888899999999999999999888999999999999999999 78863 7777888999999
Q ss_pred EEccCC-ccccc-CChhhcCCC-CCCeeeccCcc
Q 005734 148 LLLGNN-KFEGS-IPLELSRFT-LLSELQFDDYL 178 (680)
Q Consensus 148 L~L~~N-~l~g~-~P~~l~~l~-~L~~L~l~~N~ 178 (680)
|++++| .+++. +|..+..++ +|++|++++|.
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 999999 88864 677889999 99999999983
No 379
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.20 E-value=4.4e-14 Score=136.79 Aligned_cols=134 Identities=17% Similarity=0.186 Sum_probs=97.1
Q ss_pred cEeEEEcCCCCCcccCCc------ccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCC
Q 005734 72 KVQMLDMKERSLEGTLAP------DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSL 145 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~------~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 145 (680)
.++.++++.+.++|.+|+ .++.+++|++|+|++|.+++ +| .+..+++|+.|+|++|.++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 445556666666666665 77888888888888888876 66 7788888888888888887 677777777888
Q ss_pred cEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcch
Q 005734 146 KRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSET 222 (680)
Q Consensus 146 ~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~ 222 (680)
+.|+|++|.+++ +| .++.+++|++|++++|.+++..+. ..+..+..+..+++++|.+++.+|.
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~------------~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEI------------DKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHH------------HHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHH------------HHHhcCCCCCEEEecCCcccccccc
Confidence 888888888885 55 577888888888888877642110 1244556677788888877665543
No 380
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.19 E-value=5.9e-11 Score=124.98 Aligned_cols=131 Identities=19% Similarity=0.254 Sum_probs=108.1
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|++++|.+.+..+ +..+++|+.|++++|.+++. |. +..+++|+.|+|++|.+++ + +.+..+++|+.|+
T Consensus 198 l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~ 271 (347)
T 4fmz_A 198 LTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLN 271 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEE
T ss_pred CCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEE
Confidence 3578999999999886544 78899999999999999854 44 8899999999999999985 4 4688999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
+++|.+++ +| .+..+++|+.|++++|.+++..|. .+..+..++.+++++|++++..|
T Consensus 272 l~~n~l~~-~~-~~~~l~~L~~L~L~~n~l~~~~~~-------------~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 272 VGSNQISD-IS-VLNNLSQLNSLFLNNNQLGNEDME-------------VIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp CCSSCCCC-CG-GGGGCTTCSEEECCSSCCCGGGHH-------------HHHTCTTCSEEECCSSSCCCCGG
T ss_pred ccCCccCC-Ch-hhcCCCCCCEEECcCCcCCCcChh-------------HhhccccCCEEEccCCccccccC
Confidence 99999986 44 588899999999999998876554 34456677888999999988877
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.16 E-value=1.9e-12 Score=135.85 Aligned_cols=111 Identities=20% Similarity=0.158 Sum_probs=100.7
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCccc-CCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGV-IPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 6799999999999987665 67899999999999999876 888899999999999999999999999999999999999
Q ss_pred ccCC-cccc-cCChhhcCCCCCCeeeccCc-ccccc
Q 005734 150 LGNN-KFEG-SIPLELSRFTLLSELQFDDY-LTSAE 182 (680)
Q Consensus 150 L~~N-~l~g-~~P~~l~~l~~L~~L~l~~N-~~~g~ 182 (680)
|++| .+++ .+|..+.++++|++|++++| .+++.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~ 184 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK 184 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH
Confidence 9999 7886 37888999999999999999 88753
No 382
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.13 E-value=5.2e-12 Score=134.20 Aligned_cols=146 Identities=18% Similarity=0.119 Sum_probs=97.7
Q ss_pred CcEeEEEcCCCCCcccCC----cccCCCC-CCCEEEccCccCcccCCcccCCC-----CCCCEEEccCCcCCccCccccC
Q 005734 71 GKVQMLDMKERSLEGTLA----PDLGKLS-DLRFLVLQKNHFSGVIPKELGEL-----TKLELLDLSNNKLSGIIPVEIS 140 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p----~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~ 140 (680)
.+++.|+|++|.+++..+ ..+..++ +|++|+|++|.|++..+..+..+ ++|++|+|++|++++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 457888888888876655 5666777 78888888888887767666664 7888888888888866665443
Q ss_pred ----CC-CCCcEEEccCCcccccCChhhc----C-CCCCCeeeccCcccccccCCccccccccCCcccccCCC-CCCccc
Q 005734 141 ----RL-PSLKRLLLGNNKFEGSIPLELS----R-FTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGED-SLHTNG 209 (680)
Q Consensus 141 ----~l-~~L~~L~L~~N~l~g~~P~~l~----~-l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~l 209 (680)
.+ ++|+.|+|++|.+++..+..++ . .++|++|+|++|.++...+.. + ...+... ..++.+
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~------l---~~~l~~~~~~L~~L 172 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDE------L---IQILAAIPANVNSL 172 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHH------H---HHHHHTSCTTCCEE
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHH------H---HHHHhcCCccccEe
Confidence 33 7888888888888766554443 3 257888888888777532221 0 0011222 256667
Q ss_pred CCCCCCCCCCcchhhh
Q 005734 210 DHSCANLPGSSETHLV 225 (680)
Q Consensus 210 ~~s~n~l~~~~~~~~~ 225 (680)
+++.|++++..+..+.
T Consensus 173 ~Ls~n~l~~~~~~~l~ 188 (362)
T 3goz_A 173 NLRGNNLASKNCAELA 188 (362)
T ss_dssp ECTTSCGGGSCHHHHH
T ss_pred eecCCCCchhhHHHHH
Confidence 7788877766665554
No 383
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.10 E-value=1e-11 Score=132.98 Aligned_cols=146 Identities=21% Similarity=0.249 Sum_probs=101.8
Q ss_pred CCcEeEEEcCCCCCcc----cCCcccCCC---------CCCCEEEccCccCc-ccCC---cccCCCCCCCEEEccCCcCC
Q 005734 70 NGKVQMLDMKERSLEG----TLAPDLGKL---------SDLRFLVLQKNHFS-GVIP---KELGELTKLELLDLSNNKLS 132 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g----~~p~~~~~l---------~~L~~L~L~~N~l~-g~~p---~~~~~l~~L~~L~Ls~N~l~ 132 (680)
..+++.|+|++|.+++ .++..+..+ ++|++|+|++|.++ +.+| ..+..+++|+.|+|++|+++
T Consensus 121 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 121 HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp CTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred CCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 4678888888888863 345556555 78888888888887 4455 45667888888888888887
Q ss_pred --c---cCccccCCCCCCcEEEccCCccc----ccCChhhcCCCCCCeeeccCcccccccCCccccccccCCccccc--C
Q 005734 133 --G---IIPVEISRLPSLKRLLLGNNKFE----GSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKI--G 201 (680)
Q Consensus 133 --g---~~p~~~~~l~~L~~L~L~~N~l~----g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~--~ 201 (680)
| .+|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++..... +...+ .
T Consensus 201 ~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~---------l~~~l~~~ 271 (386)
T 2ca6_A 201 PEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA---------VVDAFSKL 271 (386)
T ss_dssp HHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH---------HHHHHHTC
T ss_pred HhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH---------HHHHHhhc
Confidence 3 34547778888888888888886 667888888888888888888877641110 00011 2
Q ss_pred CCCCCcccCCCCCCCCC----Ccchhh
Q 005734 202 EDSLHTNGDHSCANLPG----SSETHL 224 (680)
Q Consensus 202 ~~~~~~~l~~s~n~l~~----~~~~~~ 224 (680)
.+..+..+++++|++++ .+|..+
T Consensus 272 ~~~~L~~L~L~~n~i~~~g~~~l~~~l 298 (386)
T 2ca6_A 272 ENIGLQTLRLQYNEIELDAVRTLKTVI 298 (386)
T ss_dssp SSCCCCEEECCSSCCBHHHHHHHHHHH
T ss_pred cCCCeEEEECcCCcCCHHHHHHHHHHH
Confidence 24556667777777776 355554
No 384
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.10 E-value=3.4e-12 Score=136.81 Aligned_cols=111 Identities=23% Similarity=0.337 Sum_probs=73.6
Q ss_pred CCcEeEEEcCCC---CCcccCCccc-------CCCCCCCEEEccCccCcc----cCCcccCCCCCCCEEEccCCcCCccC
Q 005734 70 NGKVQMLDMKER---SLEGTLAPDL-------GKLSDLRFLVLQKNHFSG----VIPKELGELTKLELLDLSNNKLSGII 135 (680)
Q Consensus 70 ~~~l~~L~l~~~---~l~g~~p~~~-------~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~ 135 (680)
..+++.|+|++| .+.+.+|..+ ..+++|++|+|++|.|++ .+|..+..+++|++|+|++|.+++..
T Consensus 59 ~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~ 138 (386)
T 2ca6_A 59 KKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQA 138 (386)
T ss_dssp CTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHH
T ss_pred CCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHH
Confidence 356777777774 4455555544 567777777777777776 46667777777777777777776433
Q ss_pred ccccC----CC---------CCCcEEEccCCccc-ccCC---hhhcCCCCCCeeeccCcccc
Q 005734 136 PVEIS----RL---------PSLKRLLLGNNKFE-GSIP---LELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 136 p~~~~----~l---------~~L~~L~L~~N~l~-g~~P---~~l~~l~~L~~L~l~~N~~~ 180 (680)
+..+. .+ ++|++|+|++|.++ +.+| ..+..+++|+.|++++|.++
T Consensus 139 ~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 139 GAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred HHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 33332 33 67777777777776 4455 35667777777777777765
No 385
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.10 E-value=1.5e-10 Score=116.98 Aligned_cols=137 Identities=12% Similarity=0.112 Sum_probs=104.6
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..++.|+++.||+.... |..+++|+....... ....+.+|+++++.++ |..+.++++++.+.+ ..++||||
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--~~~lv~e~ 91 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG-----TTYDVEREKDMMLWLEGKLPVPKVLHFERHDG--WSNLLMSE 91 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT-----STTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEEC
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCC-----CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC--ceEEEEEe
Confidence 56777888899999865 678999987542111 1224788999999884 677888999988766 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE---------------------------------------- 507 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~---------------------------------------- 507 (680)
+++.+|.+.+.. ......++.+++++|+.||+.
T Consensus 92 i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (263)
T 3tm0_A 92 ADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF 164 (263)
T ss_dssp CSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSS
T ss_pred cCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccC
Confidence 999999876421 122457889999999999981
Q ss_pred ----------------CCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 508 ----------------LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 508 ----------------~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
..+.++|||++|.||+++++..+.|.||+.+..
T Consensus 165 ~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred CCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766678999987654
No 386
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.09 E-value=2.3e-10 Score=120.58 Aligned_cols=106 Identities=16% Similarity=0.040 Sum_probs=90.8
Q ss_pred CEEEccCc-cCcccCCcccCCCCCCCEEEccC-CcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeecc
Q 005734 98 RFLVLQKN-HFSGVIPKELGELTKLELLDLSN-NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFD 175 (680)
Q Consensus 98 ~~L~L~~N-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~ 175 (680)
..++++++ .|+ .+|. +..+++|+.|+|++ |+|++..|..|..|++|+.|+|++|+|++..|..|+++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45688888 898 5888 99999999999996 99998888899999999999999999999989999999999999999
Q ss_pred CcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 176 DYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 176 ~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
+|+|++..+.. +..+. +..+++..|++...
T Consensus 89 ~N~l~~~~~~~-------------~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKT-------------VQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTT-------------TCSCC-CCEEECCSSCCCCC
T ss_pred CCccceeCHHH-------------cccCC-ceEEEeeCCCccCC
Confidence 99999654431 22222 67789999998754
No 387
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.08 E-value=1.6e-11 Score=130.47 Aligned_cols=142 Identities=14% Similarity=0.050 Sum_probs=114.0
Q ss_pred EEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCC----cccCCCC-CCCEEEccCCcCCccCccccCCC-----CC
Q 005734 75 MLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP----KELGELT-KLELLDLSNNKLSGIIPVEISRL-----PS 144 (680)
Q Consensus 75 ~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p----~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~ 144 (680)
.++++.|+++|.+|..+...++|++|+|++|.|++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46789999999998877777889999999999997766 7788898 99999999999998888877775 99
Q ss_pred CcEEEccCCcccccCChhhc----CC-CCCCeeeccCcccccccCCccccccccCCcccccCC-CCCCcccCCCCCCCCC
Q 005734 145 LKRLLLGNNKFEGSIPLELS----RF-TLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGE-DSLHTNGDHSCANLPG 218 (680)
Q Consensus 145 L~~L~L~~N~l~g~~P~~l~----~l-~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~l~~s~n~l~~ 218 (680)
|++|+|++|.+++..+..++ .+ ++|+.|++++|.+++..+... . ..+.. ...++.+++++|+++.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l------~---~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEF------K---QAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH------H---HHHTTSCTTCCEEECTTSCGGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHH------H---HHHHhCCCceeEEEccCCcCCH
Confidence 99999999999987776544 44 899999999999976544311 0 11222 2467889999999987
Q ss_pred Ccchhhh
Q 005734 219 SSETHLV 225 (680)
Q Consensus 219 ~~~~~~~ 225 (680)
..+..+.
T Consensus 153 ~~~~~l~ 159 (362)
T 3goz_A 153 KSSDELI 159 (362)
T ss_dssp SCHHHHH
T ss_pred HHHHHHH
Confidence 6655554
No 388
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.07 E-value=5.2e-10 Score=112.41 Aligned_cols=131 Identities=8% Similarity=0.064 Sum_probs=97.5
Q ss_pred ccC-CCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc--ccceeeEEecCCCCceEEEEE
Q 005734 390 IID-TQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN--FVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 390 ~iG-~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~~~lV~e 466 (680)
.++ .|..+.||+....+|..++||...... ...+.+|+++++.+++.+ +.+++++...++ ..++|||
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~--------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~--~~~~v~e 95 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA--------LNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLG 95 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT--------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEE
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCccc--------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCC--CCEEEEE
Confidence 344 556689999988888889999864321 134778899998886545 455888877665 5799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL-------------------------------------- 508 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~-------------------------------------- 508 (680)
|+++.+|. ... .+ ...++.++++.|+.||+..
T Consensus 96 ~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 96 EVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp CCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred ecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 99998884 211 12 2367888889999999742
Q ss_pred -----------------CCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 509 -----------------NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 509 -----------------~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.+.++|||++|.||+++++..+.|.||+.+..
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876678999998754
No 389
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.05 E-value=4.1e-10 Score=127.51 Aligned_cols=76 Identities=22% Similarity=0.250 Sum_probs=38.0
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccC-----------------CCCCCCEEEccCCcCCcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELG-----------------ELTKLELLDLSNNKLSGI 134 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~-----------------~l~~L~~L~Ls~N~l~g~ 134 (680)
+++.|++++|.+++ +|.. +++|++|+|++|.|++ +|..+. .+++|+.|+|++|.+++
T Consensus 122 ~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~- 195 (622)
T 3g06_A 122 GLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS- 195 (622)
T ss_dssp TCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-
T ss_pred CcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-
Confidence 45555555555543 3332 2555555555555553 222222 12677777777777774
Q ss_pred CccccCCCCCCcEEEccCCccc
Q 005734 135 IPVEISRLPSLKRLLLGNNKFE 156 (680)
Q Consensus 135 ~p~~~~~l~~L~~L~L~~N~l~ 156 (680)
+|..+ ++|+.|++++|.++
T Consensus 196 l~~~~---~~L~~L~L~~N~l~ 214 (622)
T 3g06_A 196 LPTLP---SELYKLWAYNNRLT 214 (622)
T ss_dssp CCCCC---TTCCEEECCSSCCS
T ss_pred CCCcc---chhhEEECcCCccc
Confidence 44332 34444444444444
No 390
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.03 E-value=5.3e-10 Score=118.06 Aligned_cols=113 Identities=17% Similarity=0.195 Sum_probs=93.8
Q ss_pred eeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCcc-ccCCCCC
Q 005734 66 VRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPV-EISRLPS 144 (680)
Q Consensus 66 v~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~ 144 (680)
-.|.. +.++.++++|+ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++
T Consensus 7 C~C~~---~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~ 80 (350)
T 4ay9_X 7 CHCSN---RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80 (350)
T ss_dssp SEEET---TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTT
T ss_pred cEeeC---CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchh
Confidence 35654 35778899998 678766 36899999999999965556799999999999999999877775 5788998
Q ss_pred CcE-EEccCCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 145 LKR-LLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 145 L~~-L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
|+. +.++.|+++...|..|..+++|++|++++|.++...+
T Consensus 81 l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~ 121 (350)
T 4ay9_X 81 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 121 (350)
T ss_dssp CCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC
T ss_pred hhhhhcccCCcccccCchhhhhccccccccccccccccCCc
Confidence 775 6777899998778889999999999999999986544
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.99 E-value=5.2e-12 Score=122.08 Aligned_cols=112 Identities=21% Similarity=0.257 Sum_probs=99.4
Q ss_pred CCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 69 LNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 69 ~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
...+++.|+|++|.+++ +| .+..+++|++|++++|.|+ .+|..+..+++|+.|+|++|++++ +| .+..+++|++|
T Consensus 46 ~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L 120 (198)
T 1ds9_A 46 TLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVL 120 (198)
T ss_dssp HTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEE
T ss_pred cCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEE
Confidence 34689999999999997 66 8999999999999999998 688888888999999999999996 66 68899999999
Q ss_pred EccCCcccccCC-hhhcCCCCCCeeeccCcccccccCC
Q 005734 149 LLGNNKFEGSIP-LELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 149 ~L~~N~l~g~~P-~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
++++|.+++..+ ..+..+++|++|++++|.+++.+|.
T Consensus 121 ~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 121 YMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp EESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred ECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 999999995322 4789999999999999999887765
No 392
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.94 E-value=3.8e-09 Score=111.85 Aligned_cols=144 Identities=10% Similarity=0.149 Sum_probs=105.7
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEee--eccchhhHHHHHHHHHHHHHHHHcCC--CCcccceeeEEecCCC-CceEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATA--ITSSKDWLKSQEMAYRKQVDTLSRIN--HKNFVNLIGYCEDDEP-FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~--~~~~~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~-~~~~l 463 (680)
+.++.|.++.||+....+ ..+++|+.. .... ......+.+|.++++.++ +..+.++++++.+... ...++
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~----~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL----LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC--------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC----CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 578899999999998765 467777654 2110 112346788999999987 4567889999876531 14689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL----------------------------------- 508 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~----------------------------------- 508 (680)
||||+++..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 119 vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp EEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 99999998875422 124788899999999999999999731
Q ss_pred --------------------CCCeeecCCCCCCeeecCCCC--eEEccccccccc
Q 005734 509 --------------------NPPVAHSNLSSHCIYLTDDYA--AKVAEICFTTIA 541 (680)
Q Consensus 509 --------------------~~~ivHrDlKp~NILld~~~~--~ki~DFGla~~~ 541 (680)
.+.++|||+++.||++++++. +.|.||+.+...
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 257999999999999997753 689999988653
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.79 E-value=2.6e-10 Score=124.94 Aligned_cols=147 Identities=18% Similarity=0.118 Sum_probs=107.1
Q ss_pred CCcEeEEEcCCCCCcccC----Cc-ccCCCCCCCEEEccCccCccc----CCcccCCCCCCCEEEccCCcCCccCccccC
Q 005734 70 NGKVQMLDMKERSLEGTL----AP-DLGKLSDLRFLVLQKNHFSGV----IPKELGELTKLELLDLSNNKLSGIIPVEIS 140 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~----p~-~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 140 (680)
..+++.|+|++|.+++.- .+ .+..+++|++|++++|.+++. ++..+..+++|+.|+|++|.+++..+..+.
T Consensus 226 ~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 226 KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHH
Confidence 468999999999987542 22 234688999999999999864 677788899999999999999765444443
Q ss_pred -----CCCCCcEEEccCCccccc----CChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccC-CCCCCcccC
Q 005734 141 -----RLPSLKRLLLGNNKFEGS----IPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIG-EDSLHTNGD 210 (680)
Q Consensus 141 -----~l~~L~~L~L~~N~l~g~----~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~l~ 210 (680)
..++|+.|++++|.+++. +|..+..+++|+.|++++|.+++..+.... ..+. ....++.++
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~---------~~l~~~~~~L~~L~ 376 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC---------QGLGQPGSVLRVLW 376 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHH---------HHHTSTTCCCCEEE
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHH---------HHHcCCCCceEEEE
Confidence 236999999999999865 677788889999999999988765332100 0111 134566677
Q ss_pred CCCCCCCC----Ccchhhh
Q 005734 211 HSCANLPG----SSETHLV 225 (680)
Q Consensus 211 ~s~n~l~~----~~~~~~~ 225 (680)
+++|++++ .+|..+.
T Consensus 377 L~~n~i~~~~~~~l~~~l~ 395 (461)
T 1z7x_W 377 LADCDVSDSSCSSLAATLL 395 (461)
T ss_dssp CTTSCCCHHHHHHHHHHHH
T ss_pred CCCCCCChhhHHHHHHHHH
Confidence 78887775 5565554
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.75 E-value=2.7e-10 Score=124.76 Aligned_cols=146 Identities=17% Similarity=0.141 Sum_probs=112.6
Q ss_pred CcEeEEEcCCCCCccc----CCcccCCCCCCCEEEccCccCcccC-----CcccCCCCCCCEEEccCCcCCcc----Ccc
Q 005734 71 GKVQMLDMKERSLEGT----LAPDLGKLSDLRFLVLQKNHFSGVI-----PKELGELTKLELLDLSNNKLSGI----IPV 137 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~-----p~~~~~l~~L~~L~Ls~N~l~g~----~p~ 137 (680)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++.- +..+..+++|+.|+|++|.+++. ++.
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 4899999999999874 5777888999999999999997642 33344689999999999999964 678
Q ss_pred ccCCCCCCcEEEccCCcccccCChhhcC-----CCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCC
Q 005734 138 EISRLPSLKRLLLGNNKFEGSIPLELSR-----FTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHS 212 (680)
Q Consensus 138 ~~~~l~~L~~L~L~~N~l~g~~P~~l~~-----l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s 212 (680)
.+..+++|++|+|++|.+++..+..+.. .++|+.|++++|.+++..... +...+..+..++.++++
T Consensus 279 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~---------l~~~l~~~~~L~~L~Ls 349 (461)
T 1z7x_W 279 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSH---------FSSVLAQNRFLLELQIS 349 (461)
T ss_dssp HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH---------HHHHHHHCSSCCEEECC
T ss_pred HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHH---------HHHHHhhCCCccEEEcc
Confidence 8888999999999999998655544443 369999999999987642110 01134455677889999
Q ss_pred CCCCCCCcchhhh
Q 005734 213 CANLPGSSETHLV 225 (680)
Q Consensus 213 ~n~l~~~~~~~~~ 225 (680)
+|++++..+..+.
T Consensus 350 ~n~i~~~~~~~l~ 362 (461)
T 1z7x_W 350 NNRLEDAGVRELC 362 (461)
T ss_dssp SSBCHHHHHHHHH
T ss_pred CCccccccHHHHH
Confidence 9998876555444
No 395
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.66 E-value=1.5e-08 Score=104.68 Aligned_cols=181 Identities=15% Similarity=0.173 Sum_probs=118.5
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCc--ccceeeEEecCCC-CceEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKN--FVNLIGYCEDDEP-FNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~n--iv~l~g~~~~~~~-~~~~lV 464 (680)
+.++.|....||+.. ..+++|..... .....+.+|.++++.+. +.. +.+++++....+. ...++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 457889999999863 45777764321 23456889999998884 333 3344444433221 124789
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE------------------------------------- 507 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~------------------------------------- 507 (680)
|||+++.+|.+... ..++..++..++.++++.|+.||..
T Consensus 95 m~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp EECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred EcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 99999988875432 2467778888889999998888861
Q ss_pred ------------------CCCCeeecCCCCCCeeecC--CCCeEEcccccccccCCCCCc----cc---cccc---CCC-
Q 005734 508 ------------------LNPPVAHSNLSSHCIYLTD--DYAAKVAEICFTTIALPKSKV----SD---DIEN---SVL- 556 (680)
Q Consensus 508 ------------------~~~~ivHrDlKp~NILld~--~~~~ki~DFGla~~~~~~~~~----~~---~~~~---~~~- 556 (680)
..+.++|+|++|.||++++ ...+.|.||+.+....+.... .. ..+. ...
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 1245899999999999998 456789999988764321100 00 0000 000
Q ss_pred -CCCCC-C--------CCCeeehhHHHHHHHhCCCCCC
Q 005734 557 -PPLAD-P--------ETNIYSFGILMLEIISGKLPYC 584 (680)
Q Consensus 557 -~~~~s-~--------~sDVySfGvvllElltG~~p~~ 584 (680)
.+..+ + ..+.|+++++++++.+|+.+|.
T Consensus 251 ~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 251 HYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 01111 1 1578999999999999998764
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.60 E-value=6.9e-10 Score=118.02 Aligned_cols=141 Identities=11% Similarity=0.045 Sum_probs=94.8
Q ss_pred CcEeEEEcCCCCCcccCCcccC-----CCCCCCEEEccCccCcccCCccc-CCCCCCCEEEccCCcCCccCcccc-----
Q 005734 71 GKVQMLDMKERSLEGTLAPDLG-----KLSDLRFLVLQKNHFSGVIPKEL-GELTKLELLDLSNNKLSGIIPVEI----- 139 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~-----~l~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~----- 139 (680)
..++.|+|++|.++......+. ..++|+.|+|++|.|+..-...+ ..+++|+.|+|++|.++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 5688999999988754333322 23689999999998865333232 345688999999999875433333
Q ss_pred CCCCCCcEEEccCCcccc----cCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCC
Q 005734 140 SRLPSLKRLLLGNNKFEG----SIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCAN 215 (680)
Q Consensus 140 ~~l~~L~~L~L~~N~l~g----~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~ 215 (680)
...++|+.|+|++|.++. .++..+..+++|++|+|++|.++..-.. .+...+.....++.+++++|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~---------~L~~~L~~~~~L~~L~Ls~N~ 222 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE---------LLAAQLDRNRQLQELNVAYNG 222 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH---------HHHHHGGGCSCCCEEECCSSC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH---------HHHHHHhcCCCcCeEECCCCC
Confidence 346789999999998864 3455567888899999999987642111 001123344567788888888
Q ss_pred CCCCc
Q 005734 216 LPGSS 220 (680)
Q Consensus 216 l~~~~ 220 (680)
++...
T Consensus 223 i~~~g 227 (372)
T 3un9_A 223 AGDTA 227 (372)
T ss_dssp CCHHH
T ss_pred CCHHH
Confidence 87543
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.57 E-value=4.2e-09 Score=111.91 Aligned_cols=140 Identities=19% Similarity=0.116 Sum_probs=103.6
Q ss_pred CcEeEEEcCCCCCcccCCccc-CCCCCCCEEEccCccCcccCCccc-----CCCCCCCEEEccCCcCCc----cCccccC
Q 005734 71 GKVQMLDMKERSLEGTLAPDL-GKLSDLRFLVLQKNHFSGVIPKEL-----GELTKLELLDLSNNKLSG----IIPVEIS 140 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~-~~l~~L~~L~L~~N~l~g~~p~~~-----~~l~~L~~L~Ls~N~l~g----~~p~~~~ 140 (680)
.+++.|+|++|.++..-...+ ..+++|+.|+|++|.|+..-...+ ...++|+.|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 589999999999975433333 345689999999999975433443 356899999999999974 2455567
Q ss_pred CCCCCcEEEccCCcccc----cCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCC
Q 005734 141 RLPSLKRLLLGNNKFEG----SIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANL 216 (680)
Q Consensus 141 ~l~~L~~L~L~~N~l~g----~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l 216 (680)
.+++|++|+|++|.++. .++..+...++|+.|+|++|.++..-... +...+.....+..+++++|.+
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~---------l~~~L~~~~~L~~L~Ls~N~i 251 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA---------LARAAREHPSLELLHLYFNEL 251 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH---------HHHHHHHCSSCCEEECTTSSC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH---------HHHHHHhCCCCCEEeccCCCC
Confidence 89999999999999975 34566788899999999999987532210 001233345678899999998
Q ss_pred CCC
Q 005734 217 PGS 219 (680)
Q Consensus 217 ~~~ 219 (680)
+..
T Consensus 252 ~~~ 254 (372)
T 3un9_A 252 SSE 254 (372)
T ss_dssp CHH
T ss_pred CHH
Confidence 753
No 398
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.55 E-value=3.6e-09 Score=106.15 Aligned_cols=66 Identities=29% Similarity=0.374 Sum_probs=37.4
Q ss_pred CCCCCCEEEccCCcCCc--cCccccCCCCCCcEEEccCCcccccCChhhcCCC--CCCeeeccCcccccccC
Q 005734 117 ELTKLELLDLSNNKLSG--IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFT--LLSELQFDDYLTSAEVA 184 (680)
Q Consensus 117 ~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~--~L~~L~l~~N~~~g~~p 184 (680)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|++++. ..+..+. +|+.|+|++|.+++.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 45566666666666665 3444555566666666666666643 2233333 56666666666665544
No 399
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.39 E-value=1.2e-06 Score=91.00 Aligned_cols=132 Identities=9% Similarity=0.149 Sum_probs=96.3
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC----CcccceeeEEecCCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH----KNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H----~niv~l~g~~~~~~~~~~~lV 464 (680)
+.++.|....||+. |..+++|+.... .....+.+|.+++..+++ -.+.+++++ + ..++|
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~-------~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~--~~~lv 105 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRD-------SVRISQKRELELYRFLENCKLSYQIPAVVYQ----S--DRFNI 105 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH-------HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----C--SSCEE
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcH-------HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----C--CcEEE
Confidence 67889999999998 566788765321 223458899999988866 223445554 2 34899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-----------------------------------
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELN----------------------------------- 509 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~----------------------------------- 509 (680)
|||+++.++.+... ..++..++..++.++++.|+.||+...
T Consensus 106 me~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 106 MKYIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp EECCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EeecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 99999988874331 235677778888888888888885321
Q ss_pred -------------------------CCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 510 -------------------------PPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 510 -------------------------~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
+.++|+|++|.||+++++..+.|.||+.+...
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 24599999999999999766799999987653
No 400
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.37 E-value=2.5e-07 Score=92.70 Aligned_cols=81 Identities=23% Similarity=0.301 Sum_probs=68.0
Q ss_pred CCCCCCCEEEccCccCcc--cCCcccCCCCCCCEEEccCCcCCccCccccCCCC--CCcEEEccCCcccccCCh------
Q 005734 92 GKLSDLRFLVLQKNHFSG--VIPKELGELTKLELLDLSNNKLSGIIPVEISRLP--SLKRLLLGNNKFEGSIPL------ 161 (680)
Q Consensus 92 ~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~L~~N~l~g~~P~------ 161 (680)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 357899999999999998 5677788999999999999999965 3444455 999999999999988873
Q ss_pred -hhcCCCCCCeeec
Q 005734 162 -ELSRFTLLSELQF 174 (680)
Q Consensus 162 -~l~~l~~L~~L~l 174 (680)
.+..+++|+.||-
T Consensus 245 ~il~~~P~L~~LDg 258 (267)
T 3rw6_A 245 AIRERFPKLLRLDG 258 (267)
T ss_dssp HHHHHCTTCCEESS
T ss_pred HHHHHCcccCeECC
Confidence 3778899998863
No 401
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.36 E-value=4.8e-07 Score=92.41 Aligned_cols=138 Identities=14% Similarity=0.213 Sum_probs=91.4
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCC---cccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK---NFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.|+.|.++.||+.+..+|..++||+...... .....|.+|++.|+.++|. .+.+++++. ..++||
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~-----~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~------~~~lvm 89 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAP-----ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------DRTLAM 89 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCC-----CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------TTEEEE
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCc-----chhHHHHHHHHHHHHHHhcCCCCcCeEEEec------CcEEEE
Confidence 67899999999999999999999998643211 1124588999999999876 477777763 238999
Q ss_pred EecCCCChhh-----------hhccCCCC-------------------CCCHHHH-----HHH---------------HH
Q 005734 466 EYAPNGTVFE-----------HLHIKEMD-------------------HLDWNAR-----MRI---------------IM 495 (680)
Q Consensus 466 ey~~~GsL~~-----------~l~~~~~~-------------------~l~~~~r-----l~i---------------a~ 495 (680)
||++++++.. .||..... .-+|..- +.- ..
T Consensus 90 e~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~ 169 (288)
T 3d1u_A 90 EWVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVR 169 (288)
T ss_dssp ECCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHH
T ss_pred EecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 9999987642 13321110 1245422 111 11
Q ss_pred HHHHHHHHHh----cCCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 005734 496 GTAYCLQYMH----HELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT 539 (680)
Q Consensus 496 ~ia~gL~yLH----~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~ 539 (680)
.+.+.++.+. ....+.++|+|+.+.||+++++ .+.|.|| .+.
T Consensus 170 ~~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 170 LVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 1122233332 2346789999999999999984 5889999 654
No 402
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.30 E-value=3.1e-08 Score=111.92 Aligned_cols=136 Identities=8% Similarity=0.025 Sum_probs=85.6
Q ss_pred CcEeEEEcCC-----------CCCccc-CCcccCCCCCCCEEEccCccCcccCCcccCC-CCCCCEEEcc----CCcCCc
Q 005734 71 GKVQMLDMKE-----------RSLEGT-LAPDLGKLSDLRFLVLQKNHFSGVIPKELGE-LTKLELLDLS----NNKLSG 133 (680)
Q Consensus 71 ~~l~~L~l~~-----------~~l~g~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~-l~~L~~L~Ls----~N~l~g 133 (680)
++++.|++++ +.+++. ++.-...+++|++|+++.|.+++..+..++. +++|+.|+|+ .|.+++
T Consensus 342 ~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 342 KQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp TTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred CCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 5688888883 555543 2222345778888888888887766666665 7788888885 667775
Q ss_pred c-----CccccCCCCCCcEEEccCC--cccccCChhhc-CCCCCCeeeccCcccccc-cCCccccccccCCcccccCCCC
Q 005734 134 I-----IPVEISRLPSLKRLLLGNN--KFEGSIPLELS-RFTLLSELQFDDYLTSAE-VAGIRSVNRKFGQYGFKIGEDS 204 (680)
Q Consensus 134 ~-----~p~~~~~l~~L~~L~L~~N--~l~g~~P~~l~-~l~~L~~L~l~~N~~~g~-~p~~~~~~~~~~~~~~~~~~~~ 204 (680)
. ++..+..+++|+.|+|+++ .+++..+..++ .+++|+.|++++|.+++. ++. .+..+.
T Consensus 422 ~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~-------------~~~~~~ 488 (592)
T 3ogk_B 422 LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLME-------------FSRGCP 488 (592)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHH-------------HHTCCT
T ss_pred chHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHH-------------HHhcCc
Confidence 3 3444566778888888643 35555555554 367788888887776642 221 123345
Q ss_pred CCcccCCCCCCCCCC
Q 005734 205 LHTNGDHSCANLPGS 219 (680)
Q Consensus 205 ~~~~l~~s~n~l~~~ 219 (680)
.++.+++++|++++.
T Consensus 489 ~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 489 NLQKLEMRGCCFSER 503 (592)
T ss_dssp TCCEEEEESCCCBHH
T ss_pred ccCeeeccCCCCcHH
Confidence 566677777776543
No 403
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.27 E-value=5.5e-06 Score=85.30 Aligned_cols=136 Identities=11% Similarity=0.045 Sum_probs=92.2
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCC---cccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK---NFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~~~lV~ 465 (680)
..++.|....||+. |..++||+-. . ......+.+|.++|..+++. .+.+.++++..... ..++||
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g-~~~~v~ 92 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--S-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDG-NPFVGY 92 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--S-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTS-CEEEEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--C-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCC-ceEEEE
Confidence 45678888899987 4567777632 1 12345788999999999753 35566777753222 468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE-------------------------------------- 507 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~-------------------------------------- 507 (680)
||+++.++.+... ..++..++..++.++++.|+.||+.
T Consensus 93 e~i~G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 93 RKVQGQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp ECCCSEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred eccCCeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9999988876321 1234455555555555555555532
Q ss_pred -------------------CCCCeeecCCCCCCeeecC---CCC-eEEcccccccc
Q 005734 508 -------------------LNPPVAHSNLSSHCIYLTD---DYA-AKVAEICFTTI 540 (680)
Q Consensus 508 -------------------~~~~ivHrDlKp~NILld~---~~~-~ki~DFGla~~ 540 (680)
..+.++|+|+++.||++++ ++. ..|.||+.+..
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2345799999999999987 455 48999998765
No 404
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.26 E-value=5e-06 Score=83.77 Aligned_cols=136 Identities=13% Similarity=0.116 Sum_probs=92.7
Q ss_pred cccCCCCCC-eEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGC-TIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g-~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.+..|..+ .||+-... ++..+.||+-... ...++.+|...|+.+. +--+.++++++.+++ ..++||
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--~~~lvm 99 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS--------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--DAWLLT 99 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH--------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC--------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--eEEEEE
Confidence 445555555 69998765 4567888875421 2346788999988874 334667889988776 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE-------------------------------------- 507 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~-------------------------------------- 507 (680)
|++++.++.+..... ...+..++.++++.|+-||..
T Consensus 100 e~l~G~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (272)
T 4gkh_A 100 TAIPGKTAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNG 173 (272)
T ss_dssp ECCCSEEHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTT
T ss_pred EeeCCccccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccc
Confidence 999998877654211 112334455555555555531
Q ss_pred -----------------CCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 508 -----------------LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 508 -----------------~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
..+.++|+|+.+.||+++++..+-|.||+.+..
T Consensus 174 ~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 174 WPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112379999999999999887778999988764
No 405
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.20 E-value=3.3e-06 Score=87.85 Aligned_cols=57 Identities=11% Similarity=0.252 Sum_probs=39.0
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccC
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSN 128 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 128 (680)
.+++.|+|+. ++...-+..|.++++|+.|++++|.+...-+..|..+.++..+.++.
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~ 157 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGS 157 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTC
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcc
Confidence 5788888888 77755556788888888888888887655555566555555554443
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.18 E-value=3.4e-07 Score=87.03 Aligned_cols=111 Identities=14% Similarity=0.145 Sum_probs=67.6
Q ss_pred CCcEeEEEcCCC-CCccc----CCcccCCCCCCCEEEccCccCccc----CCcccCCCCCCCEEEccCCcCCcc----Cc
Q 005734 70 NGKVQMLDMKER-SLEGT----LAPDLGKLSDLRFLVLQKNHFSGV----IPKELGELTKLELLDLSNNKLSGI----IP 136 (680)
Q Consensus 70 ~~~l~~L~l~~~-~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 136 (680)
...++.|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.++.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 456777777777 66532 334455566777777777777532 233344556677777777777642 34
Q ss_pred cccCCCCCCcEEEc--cCCccccc----CChhhcCCCCCCeeeccCcccc
Q 005734 137 VEISRLPSLKRLLL--GNNKFEGS----IPLELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 137 ~~~~~l~~L~~L~L--~~N~l~g~----~P~~l~~l~~L~~L~l~~N~~~ 180 (680)
..+...++|++|+| ++|.+... +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 45566667777777 66776542 3334455566777777766553
No 407
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.13 E-value=5.5e-06 Score=86.18 Aligned_cols=101 Identities=12% Similarity=0.049 Sum_probs=57.9
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCC-EEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLE-LLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|+|++|+++..-+..|.++++|+.|+|.+| +...-+..|.++++|+ .++|++ +++..-+..|.+|++|+.++
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 35666666666665444445666666666666665 5544445566666666 666665 45433345566666666666
Q ss_pred ccCCcccccCChhhcCCCCCCeee
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQ 173 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~ 173 (680)
+++|+++..-+..|.++++|+.++
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEE
T ss_pred eCCCccCccchhhhcCCcchhhhc
Confidence 666666543344566666666554
No 408
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.13 E-value=5.7e-07 Score=101.51 Aligned_cols=105 Identities=14% Similarity=0.142 Sum_probs=83.8
Q ss_pred cEeEEEcCCCC-Ccc-cCCcccCCCCCCCEEEccCccCccc----CCcccCCCCCCCEEEccCCcCC----ccCccccCC
Q 005734 72 KVQMLDMKERS-LEG-TLAPDLGKLSDLRFLVLQKNHFSGV----IPKELGELTKLELLDLSNNKLS----GIIPVEISR 141 (680)
Q Consensus 72 ~l~~L~l~~~~-l~g-~~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~----g~~p~~~~~ 141 (680)
+++.|+|+++. ++. .++.....+++|++|+|++|.+++. ++..+..+++|+.|+|++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 49999999886 221 1223334789999999999998765 4445567899999999999997 345556678
Q ss_pred CCCCcEEEccCCcccccCChhhcCCCCCCeeeccCc
Q 005734 142 LPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 142 l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N 177 (680)
+++|+.|++++|.+.+ +|..+..+++|+.|+++.+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~ 253 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSL 253 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccc
Confidence 9999999999999986 7888999999999999864
No 409
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.01 E-value=1.4e-05 Score=84.38 Aligned_cols=141 Identities=7% Similarity=0.080 Sum_probs=88.1
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc--ccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN--FVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~~~lV~e 466 (680)
..++.|....+|+... +|..+++|..... ..+.+|..++..+.... +.++++++..... ..++|||
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g-~~~lv~e 114 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA----------DGFYKDRYVYRHFASAALPIPEVLDIGEFSES-LTYCISR 114 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC----------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSS-CEEEEEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch----------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCC-CeEEEEE
Confidence 5678888999999886 4777888866321 14778888888886543 4567777765432 5699999
Q ss_pred ecCCCChhhh------------------hccCCCC---------------CCCHHHHH---------------------H
Q 005734 467 YAPNGTVFEH------------------LHIKEMD---------------HLDWNARM---------------------R 492 (680)
Q Consensus 467 y~~~GsL~~~------------------l~~~~~~---------------~l~~~~rl---------------------~ 492 (680)
|+++.++.+. ||..... .-+|...+ .
T Consensus 115 ~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~ 194 (362)
T 3ovc_A 115 RAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSAS 194 (362)
T ss_dssp CCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHH
T ss_pred ecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 9997665421 1111000 00122111 1
Q ss_pred HHHHHHHHHHHHhcC-CCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 493 IIMGTAYCLQYMHHE-LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 493 ia~~ia~gL~yLH~~-~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
....+..-++++... ..+.++|+|+.+.||+++++..+.|.||+.+..-
T Consensus 195 ~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 195 VAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 111222223333221 1257899999999999988777889999987654
No 410
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.00 E-value=1.5e-05 Score=83.79 Aligned_cols=149 Identities=6% Similarity=0.028 Sum_probs=88.0
Q ss_pred ccc-CCCCCCeEEEEEeC-------CCCEEEEEEeeeccc-hhhHHHHHHHHHHHHHHHHcCC-C--CcccceeeEEecC
Q 005734 389 NII-DTQSGCTIYKGTLS-------SGVEIAVAATAITSS-KDWLKSQEMAYRKQVDTLSRIN-H--KNFVNLIGYCEDD 456 (680)
Q Consensus 389 ~~i-G~G~~g~Vyk~~~~-------~g~~vaVK~~~~~~~-~~~~~~~~~~f~~E~~~l~~l~-H--~niv~l~g~~~~~ 456 (680)
+.| +.|....+|+.... ++..+++|....... ... ....+.+|+++++.++ + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~---~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~ 102 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVF---PTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG 102 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSS---SCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccC---chhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC
Confidence 456 78888899998765 256778876543210 000 0124667788887774 2 3467788887654
Q ss_pred CC-CceEEEEEecCCCChhhhhcc----CCCCCCCHHHHHHHHHHHHHHH------------------------------
Q 005734 457 EP-FNRMMVFEYAPNGTVFEHLHI----KEMDHLDWNARMRIIMGTAYCL------------------------------ 501 (680)
Q Consensus 457 ~~-~~~~lV~ey~~~GsL~~~l~~----~~~~~l~~~~rl~ia~~ia~gL------------------------------ 501 (680)
.. ...++||||+++..+.+.+.. .....++..++..++.++++.|
T Consensus 103 ~~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~ 182 (357)
T 3ats_A 103 DVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHF 182 (357)
T ss_dssp TTTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHHHTGGGC-----CCHHHHHH
T ss_pred CccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccCChhhccCCCCCCchHHHHH
Confidence 21 135899999998776543200 0000122222333333333333
Q ss_pred ------------------------HHHhcCC-------CCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 502 ------------------------QYMHHEL-------NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 502 ------------------------~yLH~~~-------~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.+|.... .+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 183 NWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred HHHHHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 3332211 35789999999999999654578999998764
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.86 E-value=5.9e-07 Score=101.36 Aligned_cols=86 Identities=10% Similarity=0.054 Sum_probs=38.7
Q ss_pred CCCCCEEEccCccCcccCCcccC-CCCCCCEEEcc--C----CcCCcc-----CccccCCCCCCcEEEccCCcccccCCh
Q 005734 94 LSDLRFLVLQKNHFSGVIPKELG-ELTKLELLDLS--N----NKLSGI-----IPVEISRLPSLKRLLLGNNKFEGSIPL 161 (680)
Q Consensus 94 l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls--~----N~l~g~-----~p~~~~~l~~L~~L~L~~N~l~g~~P~ 161 (680)
+++|+.|.+..|.+++..+..+. .+++|+.|+|+ + |.+++. ++..+..+++|+.|+|++ .+++..+.
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 45555555555555544333333 35555555555 2 333311 111133445555555544 33333333
Q ss_pred hhcC-CCCCCeeeccCcccc
Q 005734 162 ELSR-FTLLSELQFDDYLTS 180 (680)
Q Consensus 162 ~l~~-l~~L~~L~l~~N~~~ 180 (680)
.++. +++|+.|++++|.++
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~ 469 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDS 469 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSS
T ss_pred HHHHhchhccEeeccCCCCc
Confidence 3333 445555555555443
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.86 E-value=1.6e-06 Score=82.37 Aligned_cols=122 Identities=15% Similarity=0.056 Sum_probs=89.5
Q ss_pred CCcccCCCCCCCEEEccCc-cCccc----CCcccCCCCCCCEEEccCCcCCcc----CccccCCCCCCcEEEccCCcccc
Q 005734 87 LAPDLGKLSDLRFLVLQKN-HFSGV----IPKELGELTKLELLDLSNNKLSGI----IPVEISRLPSLKRLLLGNNKFEG 157 (680)
Q Consensus 87 ~p~~~~~l~~L~~L~L~~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g 157 (680)
+...+...+.|+.|+|++| .|... +...+...++|++|+|++|.+... +...+...++|++|+|++|.+..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4445677899999999999 88642 445567789999999999999742 34455667899999999999985
Q ss_pred c----CChhhcCCCCCCeeec--cCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC
Q 005734 158 S----IPLELSRFTLLSELQF--DDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 158 ~----~P~~l~~l~~L~~L~l--~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
. +...+...++|++|+| ++|.++..-... + ...+.....+..++++.|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~------l---~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEME------I---ANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH------H---HHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHH------H---HHHHHhCCCcCEEeccCCCCC
Confidence 3 5567788889999999 889886532210 0 112333456778889888764
No 413
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.80 E-value=1.9e-06 Score=97.20 Aligned_cols=107 Identities=15% Similarity=0.161 Sum_probs=65.0
Q ss_pred CcEeEEEcCCCCCcccCCcccC-CCCCCCEEEccCc-cCccc-CCcccCCCCCCCEEEccCCcCCccCcccc----CCCC
Q 005734 71 GKVQMLDMKERSLEGTLAPDLG-KLSDLRFLVLQKN-HFSGV-IPKELGELTKLELLDLSNNKLSGIIPVEI----SRLP 143 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~-~l~~L~~L~L~~N-~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~----~~l~ 143 (680)
++++.|+|+++.+++..+..+. .+++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4677777777777665555554 5677777777777 44432 34444467777777777777665443333 2556
Q ss_pred CCcEEEccCCc--ccc-cCChhhcCCCCCCeeeccCc
Q 005734 144 SLKRLLLGNNK--FEG-SIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 144 ~L~~L~L~~N~--l~g-~~P~~l~~l~~L~~L~l~~N 177 (680)
+|+.|++++|. ++. .++..+.++++|++|++++|
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 77777777775 221 11222345677777777776
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.68 E-value=1e-05 Score=85.23 Aligned_cols=40 Identities=13% Similarity=0.141 Sum_probs=19.6
Q ss_pred CCCCcEEEccCCcccccCChhhc---CCCCCCeeeccCccccc
Q 005734 142 LPSLKRLLLGNNKFEGSIPLELS---RFTLLSELQFDDYLTSA 181 (680)
Q Consensus 142 l~~L~~L~L~~N~l~g~~P~~l~---~l~~L~~L~l~~N~~~g 181 (680)
+++|++|+|.+|.+.+..+..+. .+++|++|+|+.|.++.
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 45555555555555433322222 34555555555555443
No 415
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.63 E-value=9.9e-05 Score=78.77 Aligned_cols=79 Identities=10% Similarity=-0.053 Sum_probs=47.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccc-hhhH-HHHHHHHHHHHHHHHcCCC--Cccc-ceeeEEecCCCCceE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSS-KDWL-KSQEMAYRKQVDTLSRINH--KNFV-NLIGYCEDDEPFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~-~~~~-~~~~~~f~~E~~~l~~l~H--~niv-~l~g~~~~~~~~~~~ 462 (680)
+.+|.|..+.||+++.. ++..++||....... .... ......+..|.+++..+.. +..+ +++.+. .+ ..+
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~--~~~ 111 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TE--MAV 111 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TT--TTE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CC--ccE
Confidence 67899999999999864 467899997643211 0000 0012345678888887742 4444 455443 33 348
Q ss_pred EEEEecCCC
Q 005734 463 MVFEYAPNG 471 (680)
Q Consensus 463 lV~ey~~~G 471 (680)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999764
No 416
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.62 E-value=0.00038 Score=71.52 Aligned_cols=136 Identities=15% Similarity=0.174 Sum_probs=89.6
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC---CCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN---HKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.|+.|....+|+.... +..++||+.... ....|..|.+.|+.+. ...+.++++++...+ ..++||
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g--~~~lvm 110 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS--------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG--HSFLLL 110 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG--------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS--EEEEEE
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc--------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC--ceEEEE
Confidence 56789999999998864 567888876422 1345788888888874 356888888887665 679999
Q ss_pred EecCCCChhh-----------hhccCCC-C-------------------CCCHHH-----HHHHHHH-------------
Q 005734 466 EYAPNGTVFE-----------HLHIKEM-D-------------------HLDWNA-----RMRIIMG------------- 496 (680)
Q Consensus 466 ey~~~GsL~~-----------~l~~~~~-~-------------------~l~~~~-----rl~ia~~------------- 496 (680)
||+++..+.. .||.... . .-+|.. |+.-..+
T Consensus 111 e~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~ 190 (312)
T 3jr1_A 111 EALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNID 190 (312)
T ss_dssp ECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHH
T ss_pred EeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 9999876532 1332111 0 125653 2221111
Q ss_pred -HH-HHHHHHh-cCCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 497 -TA-YCLQYMH-HELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 497 -ia-~gL~yLH-~~~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
+. +....|. ....|.++|+|+.+.|++++.++ +.|.||.
T Consensus 191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 1123343 23467899999999999999887 8899974
No 417
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.60 E-value=0.00029 Score=73.12 Aligned_cols=44 Identities=9% Similarity=0.117 Sum_probs=34.2
Q ss_pred HHHHHHHHhc----------CCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 497 TAYCLQYMHH----------ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 497 ia~gL~yLH~----------~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
+.+++++|+. ...+.++|||+++.||+++.+..+.|.||+.+..
T Consensus 199 ~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 199 GLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 3446677763 1245899999999999998888899999997653
No 418
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.57 E-value=1.5e-05 Score=83.78 Aligned_cols=110 Identities=14% Similarity=0.213 Sum_probs=71.2
Q ss_pred cEeEEEcCCCCCcccCCcccC--CCCCCCEEEccC--ccCccc-----CCccc--CCCCCCCEEEccCCcCCccCcccc-
Q 005734 72 KVQMLDMKERSLEGTLAPDLG--KLSDLRFLVLQK--NHFSGV-----IPKEL--GELTKLELLDLSNNKLSGIIPVEI- 139 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~--~l~~L~~L~L~~--N~l~g~-----~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~- 139 (680)
+|+.|+|..+++.......++ .+++|+.|+|+. |...|. +...+ ..+++|++|+|++|.+.+..+..+
T Consensus 194 ~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la 273 (362)
T 2ra8_A 194 NLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFL 273 (362)
T ss_dssp TCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHH
T ss_pred CCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHH
Confidence 445555544444322222232 678888888753 222111 11122 247899999999999875444333
Q ss_pred --CCCCCCcEEEccCCccccc----CChhhcCCCCCCeeeccCccccc
Q 005734 140 --SRLPSLKRLLLGNNKFEGS----IPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 140 --~~l~~L~~L~L~~N~l~g~----~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
..+++|++|+|+.|.+.+. ++..+.++++|+.|++++|.++.
T Consensus 274 ~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 274 ESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp HCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred hCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 3588999999999999863 45555678999999999997764
No 419
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.51 E-value=0.00019 Score=72.94 Aligned_cols=75 Identities=16% Similarity=0.251 Sum_probs=51.7
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCC---cccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK---NFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~~~lV~ 465 (680)
..+|.|..+.||+.++.||+.+.||+-...... ....|..|.+.|+.+.-. -+.+++++ +. .++||
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~-----~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~----~~lv~ 89 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPA-----LDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD----RTLAM 89 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCC-----CTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET----TEEEE
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc-----hhhHHHHHHHHHHHHHhhCCCCcceEEec--cC----ceEEE
Confidence 567899999999999999999999975432211 122477898888887422 23444443 22 27999
Q ss_pred EecCCCChh
Q 005734 466 EYAPNGTVF 474 (680)
Q Consensus 466 ey~~~GsL~ 474 (680)
||++.+...
T Consensus 90 e~l~~~~~~ 98 (288)
T 3f7w_A 90 EWVDERPPT 98 (288)
T ss_dssp ECCCCCCCC
T ss_pred EeecccCCC
Confidence 999876543
No 420
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.14 E-value=0.0013 Score=70.15 Aligned_cols=103 Identities=16% Similarity=0.188 Sum_probs=70.0
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.+.|..+ +...-...|.++++|+.+++..| ++..-...|.+ .+|+.++|. |.++..-+..|.+|++|+.+++
T Consensus 203 ~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 203 AGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEE
T ss_pred cccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEe
Confidence 46778888744 66555567888888888888865 55344455666 678888884 4455344567778888888888
Q ss_pred cCCccc-----ccCChhhcCCCCCCeeeccCc
Q 005734 151 GNNKFE-----GSIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 151 ~~N~l~-----g~~P~~l~~l~~L~~L~l~~N 177 (680)
.+|.+. ..-+..|.+|++|+.+.|.++
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~~ 310 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIPES 310 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCCTT
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeCCc
Confidence 777664 223356778888888877643
No 421
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.06 E-value=0.0016 Score=69.83 Aligned_cols=32 Identities=19% Similarity=0.337 Sum_probs=27.8
Q ss_pred CCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 509 NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 509 ~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
.+.++|||+++.||+++++. ++|.||+.+...
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 45899999999999998876 999999887654
No 422
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.97 E-value=0.0016 Score=69.38 Aligned_cols=135 Identities=10% Similarity=0.073 Sum_probs=95.4
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCC-----ccCccccCCCCCC
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS-----GIIPVEISRLPSL 145 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-----g~~p~~~~~l~~L 145 (680)
.+|+.++|..+ +...-...|.+ .+|+.+.| .|.++..-+..|.++++|+.+++.+|.+. ..-+..|.+|++|
T Consensus 226 ~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 226 SQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 46888888864 55344446666 78999999 45566555788999999999999998875 2345678899999
Q ss_pred cEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhh
Q 005734 146 KRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHL 224 (680)
Q Consensus 146 ~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~ 224 (680)
+.++|.+ .++-.-...|.+|++|+.+.|.+|. + .|+. ..|..+ .+..+.++.|.++......|
T Consensus 303 ~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~l-~-~I~~------------~aF~~~-~L~~l~l~~n~~~~l~~~~F 365 (401)
T 4fdw_A 303 ARFEIPE-SIRILGQGLLGGNRKVTQLTIPANV-T-QINF------------SAFNNT-GIKEVKVEGTTPPQVFEKVW 365 (401)
T ss_dssp CEECCCT-TCCEECTTTTTTCCSCCEEEECTTC-C-EECT------------TSSSSS-CCCEEEECCSSCCBCCCSSC
T ss_pred CeEEeCC-ceEEEhhhhhcCCCCccEEEECccc-c-EEcH------------HhCCCC-CCCEEEEcCCCCcccccccc
Confidence 9999984 4664445678899999999987662 1 1221 245555 67778888887766544333
No 423
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.86 E-value=0.003 Score=65.33 Aligned_cols=33 Identities=6% Similarity=0.112 Sum_probs=28.0
Q ss_pred CCCeeecCCCCCCeeecCC----CCeEEccccccccc
Q 005734 509 NPPVAHSNLSSHCIYLTDD----YAAKVAEICFTTIA 541 (680)
Q Consensus 509 ~~~ivHrDlKp~NILld~~----~~~ki~DFGla~~~ 541 (680)
.+.++|||+.+.||+++.+ ..+.|.||+.+...
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 4579999999999999875 67899999987654
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.81 E-value=0.00052 Score=63.76 Aligned_cols=82 Identities=13% Similarity=0.112 Sum_probs=41.0
Q ss_pred CCCEEEccCccCcccCCcccCCCCCCCEEEccCCc-CCccCccccCCC----CCCcEEEccCCc-ccccCChhhcCCCCC
Q 005734 96 DLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK-LSGIIPVEISRL----PSLKRLLLGNNK-FEGSIPLELSRFTLL 169 (680)
Q Consensus 96 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~L~~N~-l~g~~P~~l~~l~~L 169 (680)
.|+.|||+++.++..--..+.++++|+.|+|+++. ++..-=..+..+ ++|++|+|+++. ++..-=..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555543322334556666666666653 443222223332 356666666653 443222235566666
Q ss_pred CeeeccCc
Q 005734 170 SELQFDDY 177 (680)
Q Consensus 170 ~~L~l~~N 177 (680)
+.|++++.
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666654
No 425
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.77 E-value=0.0035 Score=64.36 Aligned_cols=142 Identities=8% Similarity=0.067 Sum_probs=77.2
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc--ccceeeEE------ecCCCCc
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN--FVNLIGYC------EDDEPFN 460 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~------~~~~~~~ 460 (680)
+.|+.|....+|+....+| .+++|...... ...++..|++++..++... +.+++... ...+ .
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~-------~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g--~ 97 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV-------EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSG--R 97 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETT--E
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC-------CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECC--E
Confidence 4466777789999988766 46777765321 1123445666666653222 23333211 1112 4
Q ss_pred eEEEEEecCCCChhh--------------hhccC--C--CC------CCCHHHHHHH------------HHHHHHHHHHH
Q 005734 461 RMMVFEYAPNGTVFE--------------HLHIK--E--MD------HLDWNARMRI------------IMGTAYCLQYM 504 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~--------------~l~~~--~--~~------~l~~~~rl~i------------a~~ia~gL~yL 504 (680)
.+++++|+++..+.. .+|.. . .. ...|...+.- ...+.+.++++
T Consensus 98 ~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l 177 (322)
T 2ppq_A 98 PAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYL 177 (322)
T ss_dssp EEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHH
T ss_pred EEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 589999998865421 12211 0 00 0124432211 11244455565
Q ss_pred hcC----CCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 505 HHE----LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 505 H~~----~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
+.. ..+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 178 ~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 178 AAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 532 234789999999999999876668999987653
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.73 E-value=0.00047 Score=64.04 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=64.7
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCcc-CcccCCcccCCC----CCCCEEEccCCc-CCccCccccCCCCC
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNH-FSGVIPKELGEL----TKLELLDLSNNK-LSGIIPVEISRLPS 144 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 144 (680)
-+++.||++++.++..--..+..+++|+.|+|+++. |+..-=..+..+ ++|++|+|+++. ++..-=..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999876544567899999999999985 664323345554 479999999974 77433345778999
Q ss_pred CcEEEccCCc
Q 005734 145 LKRLLLGNNK 154 (680)
Q Consensus 145 L~~L~L~~N~ 154 (680)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999874
No 427
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.73 E-value=0.0023 Score=65.25 Aligned_cols=30 Identities=3% Similarity=0.046 Sum_probs=25.0
Q ss_pred CCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 510 PPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 510 ~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
+.++|+|+.+.||+ .+++.+.+.||..+..
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 45899999999999 5666789999987654
No 428
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.56 E-value=0.0049 Score=66.29 Aligned_cols=72 Identities=13% Similarity=0.140 Sum_probs=46.9
Q ss_pred cccCCCCCCeEEEEEeCC--------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcc-cceeeEEecCCCC
Q 005734 389 NIIDTQSGCTIYKGTLSS--------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNF-VNLIGYCEDDEPF 459 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~--------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~ 459 (680)
..|+.|....||+...++ +..+.+|+...... ...+.+|..++..+...++ .++++.+. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~-------~~~li~E~~~l~~L~~~g~~P~l~~~~~--~-- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET-------ESHLVAESVIFTLLSERHLGPKLYGIFS--G-- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC-------HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc-------HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--
Confidence 567788888999998763 46788887632110 1234578888887753344 56666543 2
Q ss_pred ceEEEEEecCCCCh
Q 005734 460 NRMMVFEYAPNGTV 473 (680)
Q Consensus 460 ~~~lV~ey~~~GsL 473 (680)
.+|+||+++.++
T Consensus 148 --g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 --GRLEEYIPSRPL 159 (429)
T ss_dssp --EEEECCCCEEEC
T ss_pred --CEEEEEeCCccc
Confidence 389999986444
No 429
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.45 E-value=0.038 Score=56.59 Aligned_cols=140 Identities=7% Similarity=0.020 Sum_probs=77.3
Q ss_pred ccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCC--cccceeeE-----EecCCCCceE
Q 005734 390 IIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK--NFVNLIGY-----CEDDEPFNRM 462 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~--niv~l~g~-----~~~~~~~~~~ 462 (680)
.++ |....||+....+|+.+++|....... ....+..|..++..++.. .+.+++.. ....+ ..+
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~------~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g--~~~ 103 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW------TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG--FYF 103 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS------CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT--EEE
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC------CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECC--EEE
Confidence 355 777899998887787788888752211 122455677777666322 24445443 11122 457
Q ss_pred EEEEecCCCChhh-----h---------hccC-------CCCCCCHHHH----HHH---------------HHHHHHHHH
Q 005734 463 MVFEYAPNGTVFE-----H---------LHIK-------EMDHLDWNAR----MRI---------------IMGTAYCLQ 502 (680)
Q Consensus 463 lV~ey~~~GsL~~-----~---------l~~~-------~~~~l~~~~r----l~i---------------a~~ia~gL~ 502 (680)
+|+||+++..+.. . +|.. .....++... ..+ ...+.+.++
T Consensus 104 ~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 183 (328)
T 1zyl_A 104 AVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIA 183 (328)
T ss_dssp EEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHH
Confidence 8999998754421 0 1210 0112333211 001 011112233
Q ss_pred HHhc----CCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 503 YMHH----ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 503 yLH~----~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.+.. ...+.++|||+++.||+++ + .+.|.||+.+..
T Consensus 184 ~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 184 AVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 3321 1234689999999999999 4 899999987654
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.37 E-value=0.0053 Score=54.07 Aligned_cols=53 Identities=28% Similarity=0.389 Sum_probs=20.6
Q ss_pred EEEcCCCCCc-ccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCC
Q 005734 75 MLDMKERSLE-GTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNN 129 (680)
Q Consensus 75 ~L~l~~~~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 129 (680)
.++.++++|+ ..+|..+. .+|++|+|++|+|+..-+..|..+++|+.|+|++|
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 65 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGAN 65 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSS
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCC
Confidence 4445555554 23333211 23444444444444222223333333443333333
No 431
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.23 E-value=0.011 Score=62.24 Aligned_cols=140 Identities=9% Similarity=0.094 Sum_probs=79.4
Q ss_pred cccCCCCCCeEEEEEeCC--------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc-ccceeeEEecCCCC
Q 005734 389 NIIDTQSGCTIYKGTLSS--------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN-FVNLIGYCEDDEPF 459 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~--------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~~ 459 (680)
+.+..|-...+|+...++ +..+.+|+-.... .....+.+|.++++.+.-.+ ..++++++. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~------~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~-- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL------QGVDSLVLESVMFAILAERSLGPQLYGVFP--E-- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---------CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc------chHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--
Confidence 456667778899998753 4678887642211 01234568888888774223 355666653 2
Q ss_pred ceEEEEEecCCCChhhh-----------------hccCC---CCCCC--HHHHHHHHHHHH-------------------
Q 005734 460 NRMMVFEYAPNGTVFEH-----------------LHIKE---MDHLD--WNARMRIIMGTA------------------- 498 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~-----------------l~~~~---~~~l~--~~~rl~ia~~ia------------------- 498 (680)
.+|+||+++.+|..- ||... ..... |.+..++..++.
T Consensus 126 --g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 203 (379)
T 3feg_A 126 --GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLK 203 (379)
T ss_dssp --EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHH
T ss_pred --ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHH
Confidence 389999988665421 12111 11222 444444443332
Q ss_pred HHHHHHh----c-CCCCCeeecCCCCCCeeecCC----CCeEEcccccccc
Q 005734 499 YCLQYMH----H-ELNPPVAHSNLSSHCIYLTDD----YAAKVAEICFTTI 540 (680)
Q Consensus 499 ~gL~yLH----~-~~~~~ivHrDlKp~NILld~~----~~~ki~DFGla~~ 540 (680)
+.+.+|. . .....++|+|+.+.||+++++ +.+.+.||..+..
T Consensus 204 ~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 204 DEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1233332 2 123468999999999999876 6899999987754
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.17 E-value=0.0082 Score=52.83 Aligned_cols=57 Identities=21% Similarity=0.385 Sum_probs=46.7
Q ss_pred CEEEccCccCc-ccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCccc
Q 005734 98 RFLVLQKNHFS-GVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFE 156 (680)
Q Consensus 98 ~~L~L~~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 156 (680)
..++.+++.|+ ..+|..+. .+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47889999986 35676543 47999999999999655566788999999999999886
No 433
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.07 E-value=0.0081 Score=63.07 Aligned_cols=73 Identities=5% Similarity=0.034 Sum_probs=41.5
Q ss_pred cccCCCCCCeEEEEEeCC---------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcc-cceeeEEecCCC
Q 005734 389 NIIDTQSGCTIYKGTLSS---------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNF-VNLIGYCEDDEP 458 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~---------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~ 458 (680)
..++.|....+|+....+ +..+.+|+..... .. ..+...|.+++..+...++ .++++.. .+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~-----~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~- 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DE-----LYNTISEFEVYKTMSKYKIAPQLLNTF--NG- 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GG-----TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT-
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cc-----eecHHHHHHHHHHHHhcCCCCceEEec--CC-
Confidence 466778888999998764 2577777653221 11 0123567777777743343 3566543 22
Q ss_pred CceEEEEEecCCCCh
Q 005734 459 FNRMMVFEYAPNGTV 473 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL 473 (680)
++||||+++..+
T Consensus 110 ---~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 ---GRIEEWLYGDPL 121 (369)
T ss_dssp ---EEEEECCCSEEC
T ss_pred ---cEEEEEecCCcC
Confidence 689999987544
No 434
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.90 E-value=0.031 Score=60.38 Aligned_cols=73 Identities=10% Similarity=0.049 Sum_probs=45.8
Q ss_pred cccCCCCCCeEEEEEeCC-CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcc-cceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSS-GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNF-VNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~-g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~~lV~e 466 (680)
..|+.|-...+|+....+ +..+.+|+........ -+-.+|..++..+...++ .++++++. + .+|+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~------idR~~E~~vl~~L~~~gl~P~ll~~~~--~----G~v~e 181 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI------INREREKKISCILYNKNIAKKIYVFFT--N----GRIEE 181 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC------SCHHHHHHHHHHHTTSSSBCCEEEEET--T----EEEEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh------cCHHHHHHHHHHHHhcCCCCCEEEEeC--C----eEEEE
Confidence 567788888999998875 4677787653221110 012478888888865555 45777662 2 35999
Q ss_pred ecCCCCh
Q 005734 467 YAPNGTV 473 (680)
Q Consensus 467 y~~~GsL 473 (680)
|+++.+|
T Consensus 182 ~I~G~~l 188 (458)
T 2qg7_A 182 FMDGYAL 188 (458)
T ss_dssp CCCSEEC
T ss_pred eeCCccC
Confidence 9987554
No 435
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.73 E-value=0.037 Score=57.31 Aligned_cols=33 Identities=9% Similarity=0.144 Sum_probs=28.2
Q ss_pred CCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 509 NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 509 ~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
.+.++|+|+.+.||++++++.+.|.||+.+...
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 357999999999999998888999999876543
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.72 E-value=0.0033 Score=59.42 Aligned_cols=84 Identities=11% Similarity=0.131 Sum_probs=39.9
Q ss_pred CCcEeEEEcCCC-CCcc----cCCcccCCCCCCCEEEccCccCccc----CCcccCCCCCCCEEEccCCcCCcc----Cc
Q 005734 70 NGKVQMLDMKER-SLEG----TLAPDLGKLSDLRFLVLQKNHFSGV----IPKELGELTKLELLDLSNNKLSGI----IP 136 (680)
Q Consensus 70 ~~~l~~L~l~~~-~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 136 (680)
+..++.|+|++| .+.. .+-..+..-+.|+.|+|++|.|... +-..+..-+.|+.|+|++|.|+.. +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 345666666654 5432 1223344445566666666666421 112233345566666666666521 11
Q ss_pred cccCCCCCCcEEEccCC
Q 005734 137 VEISRLPSLKRLLLGNN 153 (680)
Q Consensus 137 ~~~~~l~~L~~L~L~~N 153 (680)
..+..-+.|+.|+|++|
T Consensus 120 ~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHTTTTCCCSEEECCCC
T ss_pred HHHhhCCceeEEECCCC
Confidence 12333344555555543
No 437
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.91 E-value=0.078 Score=55.52 Aligned_cols=103 Identities=14% Similarity=0.143 Sum_probs=69.5
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
.++.+.+..+ +...-...+.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|..|.+|+.+.+.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 4566666443 33333446677888888888765 55444567778888888888654 442334567788888888888
Q ss_pred CCcccccCChhhcCCCCCCeeeccCc
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N 177 (680)
++.++..-...|.++++|+.+.|.++
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ccccceehhhhhcCCCCCCEEEcCcc
Confidence 88777433456788888888887654
No 438
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=94.80 E-value=0.12 Score=54.62 Aligned_cols=84 Identities=10% Similarity=0.103 Sum_probs=42.4
Q ss_pred ccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCC
Q 005734 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLL 169 (680)
Q Consensus 90 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L 169 (680)
.|.++..|+.+.+.++... .-...|.++.+|+.+.+. +.++..-...|.+|.+|+.+++..| ++-.-...|.+|++|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 4555666666666544332 333455556666666664 2333222334555666666666543 332222345566666
Q ss_pred CeeeccC
Q 005734 170 SELQFDD 176 (680)
Q Consensus 170 ~~L~l~~ 176 (680)
+.+.+.+
T Consensus 337 ~~i~ip~ 343 (394)
T 4gt6_A 337 ERIAIPS 343 (394)
T ss_dssp CEEEECT
T ss_pred CEEEECc
Confidence 6665543
No 439
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=94.77 E-value=0.055 Score=57.17 Aligned_cols=105 Identities=10% Similarity=0.158 Sum_probs=78.7
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.+.+..+-.. .-...|.+++.|+.+.+. +.+...-...|.++.+|+.++|..| ++..-...|.+|.+|+.+.+
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 46778888765432 334568889999999996 4565455577899999999999865 55344567899999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLT 179 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~ 179 (680)
..+ ++-.-...|.+|++|+.+++.+|..
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 765 5522245799999999999988754
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=94.29 E-value=0.019 Score=54.20 Aligned_cols=87 Identities=17% Similarity=0.148 Sum_probs=60.8
Q ss_pred cCCCCCCCEEEccCc-cCcc----cCCcccCCCCCCCEEEccCCcCCcc----CccccCCCCCCcEEEccCCccccc---
Q 005734 91 LGKLSDLRFLVLQKN-HFSG----VIPKELGELTKLELLDLSNNKLSGI----IPVEISRLPSLKRLLLGNNKFEGS--- 158 (680)
Q Consensus 91 ~~~l~~L~~L~L~~N-~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~--- 158 (680)
+.+-+.|+.|+|++| .|.. .+-..+..-+.|+.|+|++|++... +-..+..-+.|+.|+|++|.+...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 445578999999985 7753 1334566778899999999998732 222344457899999999998742
Q ss_pred -CChhhcCCCCCCeeeccCc
Q 005734 159 -IPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 159 -~P~~l~~l~~L~~L~l~~N 177 (680)
+-..+..-+.|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 3334555567999998765
No 441
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=93.94 E-value=0.077 Score=56.01 Aligned_cols=86 Identities=13% Similarity=0.021 Sum_probs=67.9
Q ss_pred cccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCC
Q 005734 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTL 168 (680)
Q Consensus 89 ~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~ 168 (680)
..+..+.+|+.+.+.++ +...-...|.++++|+.++|.++ ++..-...|.+|.+|+.+++..| ++-.-...|.++++
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 367 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCIN 367 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTT
T ss_pred ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCC
Confidence 35778899999999765 65455678999999999999765 66344567899999999999877 66333457999999
Q ss_pred CCeeeccCc
Q 005734 169 LSELQFDDY 177 (680)
Q Consensus 169 L~~L~l~~N 177 (680)
|+.+++.++
T Consensus 368 L~~i~lp~~ 376 (394)
T 4fs7_A 368 LKKVELPKR 376 (394)
T ss_dssp CCEEEEEGG
T ss_pred CCEEEECCC
Confidence 999998765
No 442
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=93.47 E-value=0.5 Score=49.24 Aligned_cols=90 Identities=13% Similarity=0.119 Sum_probs=62.3
Q ss_pred CcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCC
Q 005734 88 APDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFT 167 (680)
Q Consensus 88 p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~ 167 (680)
...+.....|+.+.+..+ +...-...+.++.+|+.+.+..+ ++..-...+.++.+|+.+.+..+ +...-...|.+++
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 345666778888888655 33344567788889999988776 55344556778888998888654 4422334678888
Q ss_pred CCCeeeccCcccc
Q 005734 168 LLSELQFDDYLTS 180 (680)
Q Consensus 168 ~L~~L~l~~N~~~ 180 (680)
+|+.+.+.++.++
T Consensus 287 ~L~~i~l~~~~i~ 299 (379)
T 4h09_A 287 NLTKVVMDNSAIE 299 (379)
T ss_dssp TCCEEEECCTTCC
T ss_pred ccccccccccccc
Confidence 9999888776543
No 443
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=93.31 E-value=0.13 Score=54.13 Aligned_cols=100 Identities=15% Similarity=0.065 Sum_probs=72.6
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
.++.+.+..+... .-...+..+..|+.+.+..+.+. ...+..+.+|+.+.+..+ ++..-...|.+|.+|+.+++.
T Consensus 254 ~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 254 DLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp SCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeC
Confidence 3455555544322 33456778889999988776543 356888999999999876 653445678899999999997
Q ss_pred CCcccccCChhhcCCCCCCeeeccCc
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N 177 (680)
++ ++-.-...|.++++|+.+.+..|
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc
Confidence 55 65333467899999999999766
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.28 E-value=0.24 Score=52.20 Aligned_cols=146 Identities=8% Similarity=0.067 Sum_probs=80.0
Q ss_pred cccCCCCCCeEEEEEeCC--------CCEEEEEEeeeccch---------hhHHH----HHHHHHHHHHHHHcCCCCc-c
Q 005734 389 NIIDTQSGCTIYKGTLSS--------GVEIAVAATAITSSK---------DWLKS----QEMAYRKQVDTLSRINHKN-F 446 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~--------g~~vaVK~~~~~~~~---------~~~~~----~~~~f~~E~~~l~~l~H~n-i 446 (680)
..|..|-...+|+...++ +..+.+++-...... ..+.. .......|.++++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 455567777899988764 356777765332100 00000 0112335888888885333 4
Q ss_pred cceeeEEecCCCCceEEEEEecCCCChhhh-----------------hccC---CCCCCC--HHHHHHHHHHHH------
Q 005734 447 VNLIGYCEDDEPFNRMMVFEYAPNGTVFEH-----------------LHIK---EMDHLD--WNARMRIIMGTA------ 498 (680)
Q Consensus 447 v~l~g~~~~~~~~~~~lV~ey~~~GsL~~~-----------------l~~~---~~~~l~--~~~rl~ia~~ia------ 498 (680)
.++++++. + .+|+||+++-+|... +|.. ...... |....++..++.
T Consensus 138 Pkl~~~~~--~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~ 211 (401)
T 3f2s_A 138 PKLYGIFP--Q----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTE 211 (401)
T ss_dssp CCEEEEET--T----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCS
T ss_pred CeEEEEeC--C----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcc
Confidence 55666653 2 389999986554321 1111 112223 223333333221
Q ss_pred ----------------HHH----HHHhcC-CCCCeeecCCCCCCeeecCC------CCeEEcccccccc
Q 005734 499 ----------------YCL----QYMHHE-LNPPVAHSNLSSHCIYLTDD------YAAKVAEICFTTI 540 (680)
Q Consensus 499 ----------------~gL----~yLH~~-~~~~ivHrDlKp~NILld~~------~~~ki~DFGla~~ 540 (680)
+-+ .+|... ....++|+|+.+.||+++++ +.+.+.||..+..
T Consensus 212 ~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 212 ESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223222 23468999999999999877 7899999987654
No 445
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.33 E-value=0.1 Score=35.74 Aligned_cols=27 Identities=15% Similarity=0.194 Sum_probs=14.9
Q ss_pred EeehhHHHHHHHHHHHHHHHhhhcccc
Q 005734 325 FLIIPGLFAVLIIAAAAFFTCQTRAVR 351 (680)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (680)
++++++++++++++++.++++|||+.+
T Consensus 15 ~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 15 TGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred eehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 344555555555555556666665543
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=91.08 E-value=0.68 Score=44.03 Aligned_cols=162 Identities=15% Similarity=0.086 Sum_probs=82.4
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCccccc
Q 005734 472 TVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI 551 (680)
Q Consensus 472 sL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~~~~~ 551 (680)
||.++|... +.+++..+.+.++.|.+.+|.-+-....+. .+=+-|..|++..+|.+...+ ..+.. .......
T Consensus 34 SL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~--~~i~~~~~i~l~~dG~V~f~~-~~s~~----~~~~~~~ 105 (229)
T 2yle_A 34 SLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQPR--HRVRSAAQIRVWRDGAVTLAP-AADDA----GEPPPVA 105 (229)
T ss_dssp EHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCC--CCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred cHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccCC--ceecCCcceEEecCCceeccc-ccccc----cccCCCC
Confidence 788888643 458999999999999999987762110011 122346889999999888764 11110 0000111
Q ss_pred ccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc--ccHHHHHHHHhcCCCCcccccCcccCCCCHHH-HHHHHHHH
Q 005734 552 ENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE--LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE-LEAICEVI 628 (680)
Q Consensus 552 ~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~-~~~~~~l~ 628 (680)
|+. .+...+.+.=|||+|+++|.-+-=..|-+.... ..+...+..+... ..-....|..+....++. -++
T Consensus 106 pe~-~~~~~te~~~IysLG~tLY~ALDygL~e~eE~eLS~~LE~LL~~Mt~~-~~d~~~~DeG~~~~~eg~~d~~----- 178 (229)
T 2yle_A 106 GKL-GYSQCMETEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDHMANT-VEADGSNDEGYEAAEEGLGDED----- 178 (229)
T ss_dssp -CC-SSSSSCHHHHHHHHHHHHHHHHTTTCCTTEEECCCHHHHHHHHHHTTC-CC-------------------------
T ss_pred hhh-ccccchHHHHHHHHHHHHHHHhhcCCCcccchhhCHHHHHHHHHHHhc-cccccccccccccccccccccc-----
Confidence 111 122345677899999999998873333222111 2334444333322 111112222222100000 000
Q ss_pred HHccccCCCCCCCHHHHHHHHHH
Q 005734 629 KECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 629 ~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
. ...+..|++.++|++.=..
T Consensus 179 -~--~~~~~~~~sl~~Vi~~C~~ 198 (229)
T 2yle_A 179 -E--KRKISAIRSYRDVMKLCAA 198 (229)
T ss_dssp -C--CSCCCCCCSHHHHHHHHHT
T ss_pred -c--cccccCcCCHHHHHHHHHh
Confidence 0 3467899999999876554
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.93 E-value=0.43 Score=50.43 Aligned_cols=29 Identities=10% Similarity=0.260 Sum_probs=24.2
Q ss_pred eeecCCCCCCeee------cCCCCeEEcccccccc
Q 005734 512 VAHSNLSSHCIYL------TDDYAAKVAEICFTTI 540 (680)
Q Consensus 512 ivHrDlKp~NILl------d~~~~~ki~DFGla~~ 540 (680)
++|+|+.+.|||+ +++..+++.||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4566799999987754
No 448
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=90.67 E-value=0.66 Score=49.29 Aligned_cols=139 Identities=12% Similarity=0.128 Sum_probs=80.0
Q ss_pred cccCCCCCCeEEEEEeCC--------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcc-cceeeEEecCCCC
Q 005734 389 NIIDTQSGCTIYKGTLSS--------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNF-VNLIGYCEDDEPF 459 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~--------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~ 459 (680)
..+..|-...+|+....+ +..+.+|+-...... .-+-.+|.++++.+.-.++ .++++.+ .+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~------~idR~~E~~~l~~L~~~gi~P~l~~~~--~~-- 145 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK------FYDSKVELDVFRYLSNINIAPNIIADF--PE-- 145 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C------CCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch------hcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--
Confidence 456677888999998763 567888775332111 0123467777777642233 4455533 22
Q ss_pred ceEEEEEecCCCChhhh-----------------hccC-----------CCCCCCHHHHHHHHHHH--------------
Q 005734 460 NRMMVFEYAPNGTVFEH-----------------LHIK-----------EMDHLDWNARMRIIMGT-------------- 497 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~-----------------l~~~-----------~~~~l~~~~rl~ia~~i-------------- 497 (680)
++|+||+++..|..- +|.. ...+--|.+..++..++
T Consensus 146 --~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~ 223 (424)
T 3mes_A 146 --GRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKE 223 (424)
T ss_dssp --EEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHH
T ss_pred --CEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccc
Confidence 689999998664321 1110 11111244433333222
Q ss_pred -----HHHHHHHhc---------------------CCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 498 -----AYCLQYMHH---------------------ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 498 -----a~gL~yLH~---------------------~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
...+.+|.. .....++|+|+.+.||+ ++++.+.+.||..+..
T Consensus 224 ~~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 224 LYSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred cHHHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 223334321 11236899999999999 8888899999987754
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=89.38 E-value=0.13 Score=35.16 Aligned_cols=27 Identities=19% Similarity=0.380 Sum_probs=15.1
Q ss_pred EeehhHHHHHHHHHHHHHHHhhhcccc
Q 005734 325 FLIIPGLFAVLIIAAAAFFTCQTRAVR 351 (680)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (680)
.+++++++++++++++.++++|||+.+
T Consensus 14 ~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 14 AGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred EeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 344555555555555556666665544
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=85.26 E-value=1.3 Score=42.03 Aligned_cols=116 Identities=10% Similarity=0.120 Sum_probs=77.6
Q ss_pred CCCcccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 005734 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHC 521 (680)
Q Consensus 442 ~H~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~N 521 (680)
.||+.+.. ..-.+.+ -++..|-...+...+-. -..++-..|++++..|+.--.+++.. +|--|.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD----~v~~~y~~~~~~~~f~~---ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRD----SFQIHYDINDNHTPFDN---IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSS----EEEEEECCCTTSEEGGG---GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEccc----EEEEEEEcCcccCCHHH---HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 68888766 3333333 34444444333333322 12478899999999999887666643 677899999
Q ss_pred eeecCCCCeEEcccccccccCCCCCcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCC
Q 005734 522 IYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYC 584 (680)
Q Consensus 522 ILld~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~ 584 (680)
+++|.++.+++.=.|+...+.+ ...+++.=.-.+=+++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~P--------------~~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVDP--------------LPVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTBSC--------------CCCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCCCC--------------CCCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999998877544322 122222234467788999999998875
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=77.12 E-value=0.75 Score=31.37 Aligned_cols=20 Identities=10% Similarity=0.182 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHhhhccc
Q 005734 331 LFAVLIIAAAAFFTCQTRAV 350 (680)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~ 350 (680)
++++++++++++++.|||+.
T Consensus 21 vll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 21 ILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHhheehhhh
Confidence 44444444444455555443
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.81 E-value=0.39 Score=51.80 Aligned_cols=62 Identities=3% Similarity=-0.012 Sum_probs=17.5
Q ss_pred ccccCCCCCCeEEEEEeCC-CCEEEE------EEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 388 SNIIDTQSGCTIYKGTLSS-GVEIAV------AATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~-g~~vaV------K~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
.+.+| ||.||+|.+.. ..+||| |..... ...++...+|.+|..++...+|+|+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~---~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQD---GVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC--------------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccc---cccccccccccccccccccccccccCCCcceEEe
Confidence 35565 99999999864 356887 543221 1223344578899999999999999999988753
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=74.51 E-value=11 Score=35.83 Aligned_cols=115 Identities=8% Similarity=0.023 Sum_probs=72.9
Q ss_pred CCCcccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCeeecCCCCC
Q 005734 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQ-YMHHELNPPVAHSNLSSH 520 (680)
Q Consensus 442 ~H~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~-yLH~~~~~~ivHrDlKp~ 520 (680)
.||++ . ...-.+.+ ...+.|+--+++-=...+ ..++-..|++++..++.-.. +++. -+|--+.|+
T Consensus 48 ~~~~f-~-~~I~~~eD--~~~i~y~~~~~~~~f~~i-----~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI-V-RDIDVSED--EVKVVIKPPSSFLTFAAI-----RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPE 113 (219)
T ss_dssp SCSSS-E-EEEEECSS--EEEEEEECCTTCEEHHHH-----HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGG
T ss_pred cCCCC-C-eEEEEeCC--EEEEEEEcCcccCcHHHH-----HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCc
Confidence 57776 2 22223333 334444443333222233 24788999999999988766 5554 467788999
Q ss_pred CeeecCCCCeEEcccccccccCCCCCcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCC
Q 005734 521 CIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYC 584 (680)
Q Consensus 521 NILld~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~ 584 (680)
|+++|.++.++|.-.|+-..+.+. ..+++-=.-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~lpP~--------------e~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESLPPD--------------EWDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTBSSC--------------SCCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccCCCC--------------CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999988875443221 12222223467778888888887764
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=74.05 E-value=0.88 Score=30.10 Aligned_cols=18 Identities=11% Similarity=0.228 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 005734 330 GLFAVLIIAAAAFFTCQT 347 (680)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~ 347 (680)
.++.+++++.+.++++||
T Consensus 20 ~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 20 LLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHeec
Confidence 333344444444555444
No 455
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=22.72 E-value=24 Score=22.69 Aligned_cols=14 Identities=21% Similarity=0.254 Sum_probs=5.7
Q ss_pred HHHHHHHHHHhhhc
Q 005734 335 LIIAAAAFFTCQTR 348 (680)
Q Consensus 335 ~~~~~~~~~~~~~~ 348 (680)
++++..+.++.|||
T Consensus 21 vii~l~~~~~iRRr 34 (35)
T 1iij_A 21 LILVVVVGILIKRR 34 (35)
T ss_dssp HHHTTTTTHHHHHC
T ss_pred HHHHHHhheEEeec
Confidence 33333334444444
No 456
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=21.97 E-value=67 Score=20.27 Aligned_cols=21 Identities=19% Similarity=0.512 Sum_probs=10.0
Q ss_pred hHHHHHHHHHHHHHHHhhhcc
Q 005734 329 PGLFAVLIIAAAAFFTCQTRA 349 (680)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~ 349 (680)
+++++++.++...|+++|-|+
T Consensus 14 ~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 14 AGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCceeEEEcccc
Confidence 344444444444555555443
Done!