Query 005736
Match_columns 680
No_of_seqs 509 out of 2945
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 06:01:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005736.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005736hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 2E-29 6.8E-34 261.3 30.0 225 290-589 14-273 (284)
2 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.1E-28 3.9E-33 255.5 25.9 176 488-677 19-213 (284)
3 1dqv_A Synaptotagmin III; beta 100.0 5.7E-29 2E-33 259.3 15.9 226 290-589 15-276 (296)
4 1dqv_A Synaptotagmin III; beta 100.0 6.9E-28 2.3E-32 251.1 19.3 176 488-677 20-215 (296)
5 2fk9_A Protein kinase C, ETA t 99.8 1.9E-18 6.4E-23 161.0 14.7 112 487-601 28-156 (157)
6 2dmh_A Myoferlin; beta-sandwic 99.8 6.6E-18 2.3E-22 155.2 17.0 116 487-603 6-134 (140)
7 3kwu_A MUNC13-1; calcium bindi 99.8 1.7E-17 5.8E-22 154.0 18.5 113 487-601 16-146 (148)
8 2ep6_A MCTP2 protein; beta san 99.8 4.7E-18 1.6E-22 154.8 14.3 114 486-601 11-131 (133)
9 1rlw_A Phospholipase A2, CALB 99.8 3.9E-18 1.3E-22 153.7 13.4 113 488-600 3-123 (126)
10 1wfj_A Putative elicitor-respo 99.8 6.1E-18 2.1E-22 154.6 13.5 118 487-604 9-132 (136)
11 3b7y_A E3 ubiquitin-protein li 99.8 1.1E-17 3.6E-22 156.3 15.2 117 485-601 17-152 (153)
12 1gmi_A Protein kinase C, epsil 99.7 1.2E-17 4.2E-22 152.6 14.2 113 487-602 5-133 (136)
13 2fk9_A Protein kinase C, ETA t 99.7 9.3E-18 3.2E-22 156.2 11.8 125 293-453 27-155 (157)
14 3m7f_B E3 ubiquitin-protein li 99.7 5E-17 1.7E-21 155.5 16.4 119 486-604 6-143 (176)
15 2ep6_A MCTP2 protein; beta san 99.7 4.5E-17 1.6E-21 148.2 14.0 116 291-453 9-130 (133)
16 1wfj_A Putative elicitor-respo 99.7 2.8E-17 9.6E-22 150.2 12.4 119 293-455 8-130 (136)
17 1gmi_A Protein kinase C, epsil 99.7 3.9E-17 1.3E-21 149.3 13.1 126 294-455 5-133 (136)
18 3kwu_A MUNC13-1; calcium bindi 99.7 1.6E-16 5.6E-21 147.3 16.7 115 294-454 16-146 (148)
19 2b3r_A Phosphatidylinositol-4- 99.7 1.3E-16 4.6E-21 145.3 14.3 104 488-592 20-134 (134)
20 3pyc_A E3 ubiquitin-protein li 99.7 2E-16 6.9E-21 143.7 15.0 112 488-600 5-131 (132)
21 2d8k_A Synaptotagmin VII; exoc 99.7 2.5E-16 8.5E-21 144.8 15.6 103 488-590 26-137 (141)
22 1rsy_A Synaptotagmin I; calciu 99.7 2.2E-16 7.7E-21 147.1 15.5 102 488-589 42-151 (152)
23 3fbk_A RGS3, RGP3, regulator o 99.7 1.9E-16 6.5E-21 147.8 14.5 105 487-592 26-141 (153)
24 1rlw_A Phospholipase A2, CALB 99.7 1.3E-16 4.5E-21 143.6 13.0 112 294-451 2-121 (126)
25 2dmh_A Myoferlin; beta-sandwic 99.7 2.2E-16 7.7E-21 144.9 14.7 117 293-455 5-133 (140)
26 3f04_A Synaptotagmin-1; C2A, c 99.7 2E-16 6.8E-21 145.9 14.1 102 487-588 33-142 (143)
27 2bwq_A Regulating synaptic mem 99.7 3E-16 1E-20 141.9 14.5 99 488-587 18-129 (129)
28 3rdl_A Protein kinase C alpha 99.7 1.3E-16 4.5E-21 145.8 11.8 105 488-593 16-129 (137)
29 1v27_A Regulating synaptic mem 99.7 2E-16 7E-21 145.3 12.9 104 488-592 21-137 (141)
30 2nq3_A Itchy homolog E3 ubiqui 99.7 1.8E-16 6.2E-21 150.7 12.7 117 487-604 35-163 (173)
31 3fdw_A Synaptotagmin-like prot 99.7 2E-16 6.7E-21 146.8 12.3 104 487-590 22-136 (148)
32 2z0u_A WW domain-containing pr 99.7 2.2E-16 7.7E-21 147.3 12.4 100 488-587 43-154 (155)
33 3b7y_A E3 ubiquitin-protein li 99.7 6.1E-16 2.1E-20 144.3 14.8 123 292-453 17-151 (153)
34 1rh8_A Piccolo protein; beta-s 99.7 2.1E-16 7.3E-21 145.4 10.6 103 488-590 18-140 (142)
35 1a25_A CALB, protein kinase C 99.7 1.5E-16 5.2E-21 147.7 9.4 106 488-594 31-145 (149)
36 2chd_A Rabphilin-3A, exophilin 99.7 1.1E-15 3.7E-20 140.7 14.8 102 488-589 29-141 (142)
37 3m7f_B E3 ubiquitin-protein li 99.7 9.3E-16 3.2E-20 146.6 14.9 124 293-455 6-141 (176)
38 1wfm_A Synaptotagmin XIII; C2 99.7 1.1E-15 3.9E-20 139.9 14.0 101 488-591 26-135 (138)
39 2enp_A B/K protein; C2 type 1, 99.6 9.4E-16 3.2E-20 142.0 12.3 104 487-590 25-143 (147)
40 3n5a_A Synaptotagmin-7; calciu 99.6 3.3E-15 1.1E-19 136.6 15.5 101 487-587 15-137 (138)
41 1ugk_A Synaptotagmin IV, KIAA1 99.6 5.1E-15 1.7E-19 135.5 16.5 102 488-589 22-134 (138)
42 2dmg_A KIAA1228 protein; beta- 99.6 1.5E-15 5.2E-20 139.7 13.0 102 488-590 24-137 (142)
43 2q3x_A Regulating synaptic mem 99.6 1E-15 3.5E-20 145.6 11.6 103 488-590 30-141 (171)
44 2b3r_A Phosphatidylinositol-4- 99.6 2.1E-15 7.2E-20 137.3 12.9 105 293-443 18-132 (134)
45 1tjx_A Similar to synaptotagmi 99.6 7.1E-15 2.4E-19 138.0 16.5 104 487-590 24-149 (159)
46 3pyc_A E3 ubiquitin-protein li 99.6 2.9E-15 9.8E-20 136.1 12.5 88 295-406 5-98 (132)
47 2nq3_A Itchy homolog E3 ubiqui 99.6 2.1E-15 7.3E-20 143.3 11.8 119 294-453 35-159 (173)
48 2cm5_A Rabphilin-3A; protein t 99.6 1.2E-14 4.1E-19 137.5 16.7 88 487-574 36-133 (166)
49 1rsy_A Synaptotagmin I; calciu 99.6 2.1E-15 7.3E-20 140.4 11.3 95 290-407 37-138 (152)
50 1a25_A CALB, protein kinase C 99.6 1.1E-15 3.6E-20 142.0 9.1 108 294-447 30-145 (149)
51 2d8k_A Synaptotagmin VII; exoc 99.6 5.3E-15 1.8E-19 135.9 12.6 95 290-407 21-123 (141)
52 3f04_A Synaptotagmin-1; C2A, c 99.6 3E-15 1E-19 137.9 10.5 94 291-407 30-130 (143)
53 3fbk_A RGS3, RGP3, regulator o 99.6 4.1E-15 1.4E-19 138.7 11.2 113 289-445 21-141 (153)
54 3rdl_A Protein kinase C alpha 99.6 2.5E-15 8.5E-20 137.3 9.4 107 294-446 15-129 (137)
55 2z0u_A WW domain-containing pr 99.6 2.5E-15 8.6E-20 140.2 9.4 94 290-406 38-141 (155)
56 1w15_A Synaptotagmin IV; metal 99.6 2.4E-14 8.1E-19 133.5 15.9 86 488-573 30-125 (153)
57 1v27_A Regulating synaptic mem 99.6 4.6E-15 1.6E-19 136.2 10.5 93 291-406 17-121 (141)
58 2bwq_A Regulating synaptic mem 99.6 6E-15 2.1E-19 133.3 10.9 94 291-407 14-119 (129)
59 2chd_A Rabphilin-3A, exophilin 99.6 8.3E-15 2.8E-19 134.7 11.3 94 292-408 26-129 (142)
60 3n5a_A Synaptotagmin-7; calciu 99.6 7E-15 2.4E-19 134.4 10.5 113 292-440 13-137 (138)
61 1ugk_A Synaptotagmin IV, KIAA1 99.6 1.4E-14 4.9E-19 132.5 12.0 94 292-408 19-121 (138)
62 3fdw_A Synaptotagmin-like prot 99.6 4.8E-15 1.6E-19 137.4 8.7 94 290-406 18-121 (148)
63 2cm5_A Rabphilin-3A; protein t 99.6 1.2E-14 4.1E-19 137.4 11.6 118 289-442 31-160 (166)
64 2q3x_A Regulating synaptic mem 99.6 8.9E-15 3E-19 139.0 10.2 91 294-407 29-127 (171)
65 1rh8_A Piccolo protein; beta-s 99.5 3.7E-15 1.3E-19 137.1 6.8 90 294-406 17-125 (142)
66 1tjx_A Similar to synaptotagmi 99.5 1.5E-14 5.2E-19 135.7 10.6 119 290-444 20-150 (159)
67 1wfm_A Synaptotagmin XIII; C2 99.5 3E-14 1E-18 130.4 11.8 91 290-406 21-119 (138)
68 1w15_A Synaptotagmin IV; metal 99.5 2.6E-14 8.7E-19 133.2 11.1 93 289-404 24-125 (153)
69 2dmg_A KIAA1228 protein; beta- 99.5 2.7E-14 9.1E-19 131.3 10.3 94 291-407 20-123 (142)
70 2enp_A B/K protein; C2 type 1, 99.5 2.4E-14 8.2E-19 132.5 10.0 101 290-407 21-129 (147)
71 3jzy_A Intersectin 2; C2 domai 99.5 5.4E-14 1.8E-18 157.4 14.8 116 486-601 385-507 (510)
72 2cjt_A UNC-13 homolog A, MUNC1 99.5 1.5E-13 5.2E-18 124.3 13.7 94 488-587 5-103 (131)
73 3l9b_A Otoferlin; C2-domain, b 99.5 2.7E-13 9.2E-18 121.1 13.7 111 488-603 21-141 (144)
74 3nsj_A Perforin-1; pore formin 99.5 3.3E-13 1.1E-17 149.6 15.6 107 487-601 393-503 (540)
75 2cjt_A UNC-13 homolog A, MUNC1 99.5 1.2E-13 4.1E-18 125.0 9.8 86 293-407 3-90 (131)
76 3nsj_A Perforin-1; pore formin 99.5 5.2E-13 1.8E-17 148.0 15.5 165 229-453 311-502 (540)
77 3jzy_A Intersectin 2; C2 domai 99.4 3.4E-13 1.2E-17 150.9 13.6 121 293-454 385-507 (510)
78 2cjs_A UNC-13 homolog A, MUNC1 99.4 4.9E-13 1.7E-17 126.0 12.5 84 487-576 13-99 (167)
79 2cjs_A UNC-13 homolog A, MUNC1 99.4 8.4E-13 2.9E-17 124.4 9.1 85 294-407 13-99 (167)
80 3l9b_A Otoferlin; C2-domain, b 99.3 5.6E-12 1.9E-16 112.6 11.7 85 296-408 22-111 (144)
81 1cjy_A CPLA2, protein (cytosol 99.3 2.6E-12 9E-17 146.6 10.7 108 487-596 17-132 (749)
82 1djx_A PLC-D1, phosphoinositid 99.3 2.1E-11 7.1E-16 138.2 16.5 112 486-600 495-622 (624)
83 1cjy_A CPLA2, protein (cytosol 99.2 9.8E-12 3.4E-16 141.9 10.1 92 293-408 16-115 (749)
84 3bxj_A RAS GTPase-activating p 99.2 5.2E-13 1.8E-17 147.5 -0.5 97 487-588 10-116 (483)
85 1djx_A PLC-D1, phosphoinositid 99.2 1.1E-10 3.7E-15 132.3 15.1 92 293-407 495-596 (624)
86 3bxj_A RAS GTPase-activating p 99.1 6.5E-12 2.2E-16 138.7 0.5 88 294-408 10-105 (483)
87 3pfq_A PKC-B, PKC-beta, protei 99.0 3.6E-10 1.2E-14 130.4 10.5 104 488-592 172-284 (674)
88 3pfq_A PKC-B, PKC-beta, protei 98.9 9.1E-10 3.1E-14 127.0 8.7 94 294-410 171-272 (674)
89 1yrk_A NPKC-delta, protein kin 98.9 2.6E-08 9E-13 86.2 15.1 108 488-601 6-124 (126)
90 2zkm_X 1-phosphatidylinositol- 98.8 1.9E-08 6.7E-13 116.6 13.2 94 487-590 677-782 (799)
91 3ohm_B 1-phosphatidylinositol- 98.8 1.6E-08 5.5E-13 117.4 12.4 105 487-601 724-844 (885)
92 2enj_A NPKC-theta, protein kin 98.8 5E-08 1.7E-12 85.6 12.3 108 488-601 10-129 (138)
93 3qr0_A Phospholipase C-beta (P 98.8 3E-08 1E-12 114.4 14.1 105 487-601 649-770 (816)
94 3qr0_A Phospholipase C-beta (P 98.7 5.5E-08 1.9E-12 112.3 14.5 82 295-407 650-743 (816)
95 3ohm_B 1-phosphatidylinositol- 98.7 4.8E-08 1.6E-12 113.4 13.3 82 295-407 725-817 (885)
96 2zkm_X 1-phosphatidylinositol- 98.7 7.9E-08 2.7E-12 111.6 14.2 83 294-407 677-771 (799)
97 1yrk_A NPKC-delta, protein kin 98.5 2.9E-06 9.9E-11 73.5 14.2 90 338-452 27-122 (126)
98 2enj_A NPKC-theta, protein kin 98.4 1.5E-06 5.2E-11 76.2 9.9 91 338-453 32-128 (138)
99 3l4c_A Dedicator of cytokinesi 85.1 10 0.00035 36.2 12.2 54 520-573 77-139 (220)
100 2wxf_A Phosphatidylinositol-4, 83.2 5.5 0.00019 46.7 11.5 96 489-598 218-337 (940)
101 3l4c_A Dedicator of cytokinesi 82.4 15 0.00052 34.9 12.2 54 350-403 78-138 (220)
102 3hhm_A Phosphatidylinositol-4, 79.4 8.7 0.0003 45.5 11.3 99 488-598 355-468 (1091)
103 2yrb_A Protein fantom; beta sa 78.6 16 0.00054 32.8 10.4 115 486-601 16-149 (156)
104 2yrb_A Protein fantom; beta sa 70.3 17 0.00058 32.6 8.3 94 294-408 17-119 (156)
105 3hhm_A Phosphatidylinositol-4, 70.0 15 0.00053 43.4 10.2 90 293-405 353-455 (1091)
106 1e7u_A Phosphatidylinositol 3- 66.9 29 0.00098 40.8 11.6 98 489-598 219-343 (961)
107 2y3a_A Phosphatidylinositol-4, 58.6 7.4 0.00025 46.2 4.7 66 488-556 353-429 (1092)
108 2wxf_A Phosphatidylinositol-4, 39.0 31 0.0011 40.4 5.8 56 618-676 216-277 (940)
109 1e7u_A Phosphatidylinositol 3- 35.4 83 0.0028 36.9 8.5 67 339-405 239-330 (961)
110 2y3a_A Phosphatidylinositol-4, 26.5 33 0.0011 40.8 3.2 59 618-679 352-416 (1092)
111 2obd_A Cholesteryl ester trans 25.3 6.2E+02 0.021 26.7 13.8 19 199-217 111-130 (476)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.97 E-value=2e-29 Score=261.29 Aligned_cols=225 Identities=19% Similarity=0.248 Sum_probs=183.7
Q ss_pred ccCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc---eeeeecc-CCCCCCccce
Q 005736 290 KKAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE---LTRRTDA-RPGSDPRWDS 365 (680)
Q Consensus 290 ~~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~---~~~~T~v-~~t~nP~Wne 365 (680)
+....|.|.|+|++|++|++.|..|.+ ||||++.++. ..++|++ ++++||+|||
T Consensus 14 y~~~~~~L~v~v~~a~~L~~~d~~~~~----------------------dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne 71 (284)
T 2r83_A 14 YDFQNNQLLVGIIQAAELPALDMGGTS----------------------DPYVKVFLLPDKKKKFETKVHRKTLNPVFNE 71 (284)
T ss_dssp EETTTTEEEEEEEEEECCCCCSSSSSC----------------------CEEEEEEEETCTTSCEECCCCCSCSSCEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCC----------------------CeEEEEEEEcCCCceEeCCcccCCCCCeeCc
Confidence 334459999999999999999876643 9999999963 4778988 7899999999
Q ss_pred eEEEEEecC---CCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCCC
Q 005736 366 MFNMVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGV 442 (680)
Q Consensus 366 ~f~~~v~~~---~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~ 442 (680)
+|.|.+... ...|.|+|||+|.. ++|++||++.++|.++..+ ...+.|++|...
T Consensus 72 ~f~f~v~~~~~~~~~l~~~V~d~d~~-~~~~~lG~~~i~l~~l~~~----------------------~~~~~w~~L~~~ 128 (284)
T 2r83_A 72 QFTFKVPYSELAGKTLVMAVYDFDRF-SKHDIIGEFKVPMNTVDFG----------------------HVTEEWRDLQSA 128 (284)
T ss_dssp EEEECCCGGGCTTCEEEEEEEECCSS-SCCCEEEEEEEEGGGCCCS----------------------SCEEEEEECBCC
T ss_pred eEEEEechHHhCcCEEEEEEEECCCC-CCCceeEEEEEcchhcccC----------------------CcceeEEEeecc
Confidence 999998753 46899999999986 5899999999999998643 234567777543
Q ss_pred ------ceeeEEEEEEEeeeecCCCCCCCCCCcCCCCCcccccccccCCCCcEEEEEEEEeecCCCCCCCCCCCcEEEEE
Q 005736 443 ------NSGELTVRLVLKEWQFSDGSHSLNNFHSGSQQSLSGSSNFISRTGRKINVTVVEGKDLMPKDKSGKCDPYVKLQ 516 (680)
Q Consensus 443 ------~~G~l~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~ 516 (680)
..|++.+.+.+. +..+.|.|+|++|++|+..+..+.+||||+++
T Consensus 129 ~~~~~~~~G~i~l~l~~~------------------------------p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~ 178 (284)
T 2r83_A 129 EKEEQEKLGDICFSLRYV------------------------------PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIH 178 (284)
T ss_dssp SSCCCCCCCEEEEEEEEE------------------------------TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEE
T ss_pred ccccccccccEEEEEEec------------------------------CcCCceEEEEEEeECCCCcCCCCCcCeEEEEE
Confidence 257877766432 12348999999999999999889999999999
Q ss_pred EC--C---EEEeeecc-CCCCCeeeeEEEEEeeCC---ceEEEEEEEEecCC-CCceeEEEEEEccccc-----------
Q 005736 517 YG--K---IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF-GDENMGSARVNLEGLV----------- 575 (680)
Q Consensus 517 l~--~---~~~~T~~~-~t~nP~wne~f~f~v~~~---~~~L~i~V~d~~~~-~d~~iG~~~i~L~~l~----------- 575 (680)
+. + .+++|+++ ++.||.|||+|.|.+... ...|.|+|||++.. ++++||++.+++..+.
T Consensus 179 ~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~ 258 (284)
T 2r83_A 179 LMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLA 258 (284)
T ss_dssp EEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHH
T ss_pred EEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHH
Confidence 83 2 57899999 999999999999998754 46899999999988 8999999999997631
Q ss_pred -CCCeeeEEEeCCCC
Q 005736 576 -EGSVRDIWVPLEKV 589 (680)
Q Consensus 576 -~~~~~~~w~~L~~~ 589 (680)
.+....+|++|.+.
T Consensus 259 ~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 259 NPRRPIAQWHTLQVE 273 (284)
T ss_dssp STTSCEEEEEECBCH
T ss_pred CCCCchheeeecCCc
Confidence 23466799999864
No 2
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.96 E-value=1.1e-28 Score=255.53 Aligned_cols=176 Identities=26% Similarity=0.405 Sum_probs=159.2
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CEEEeeecc-CCCCCeeeeEEEEEeeC---CceEEEEEEEEecCC-
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYG---KIVQRTRTA-HSPNHVWNQKFELDEIG---GGECLMVKCYNEEIF- 559 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~---~~~~~T~~~-~t~nP~wne~f~f~v~~---~~~~L~i~V~d~~~~- 559 (680)
+.|.|+|++|++|+.++..+.+||||+++++ ++.++|+++ ++.||.|||+|.|.+.. ....|.|+|||++..
T Consensus 19 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~~ 98 (284)
T 2r83_A 19 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFS 98 (284)
T ss_dssp TEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCCCC
Confidence 5899999999999999988999999999994 468899999 99999999999999874 257999999999988
Q ss_pred CCceeEEEEEEcccccCCCeeeEEEeCCCC------CCeEEEEEEEEEEecCCCCCCCccCCCCCceEEEEEEEeecCcc
Q 005736 560 GDENMGSARVNLEGLVEGSVRDIWVPLEKV------NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVA 633 (680)
Q Consensus 560 ~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~------~~G~i~l~l~~~~~~~~~~~~~~~~~~~~~~L~V~I~~a~~L~~ 633 (680)
+|++||++.++|.++..+.....|++|... ..|+|++++.|. +..+.|+|.|++|+||+.
T Consensus 99 ~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~--------------p~~~~l~v~v~~a~~L~~ 164 (284)
T 2r83_A 99 KHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYV--------------PTAGKLTVVILEAKNLKK 164 (284)
T ss_dssp CCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEE--------------TTTTEEEEEEEEEESCCC
T ss_pred CCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEec--------------CcCCceEEEEEEeECCCC
Confidence 899999999999999888888999999753 359999999998 677899999999999999
Q ss_pred ccCCCCCCCEEEEEEC--C---eEEeeeeeecCCCCcccceeEEEecCC
Q 005736 634 ADLRGTSDPYVKVQYG--D---LKKRTKLTVACLSGHIQNSKSSMASNL 677 (680)
Q Consensus 634 ~d~~g~~DPyV~v~lg--~---~~~kT~~~k~tlnP~wnE~f~f~V~n~ 677 (680)
+|..|.+||||+|++. + .++||+++++|+||+|||.|.|.+...
T Consensus 165 ~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 213 (284)
T 2r83_A 165 MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFE 213 (284)
T ss_dssp CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTT
T ss_pred cCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHH
Confidence 9999999999999994 2 478999999999999999999998654
No 3
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.96 E-value=5.7e-29 Score=259.25 Aligned_cols=226 Identities=19% Similarity=0.257 Sum_probs=178.7
Q ss_pred ccCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEE---cceeeeecc-CCCCCCccce
Q 005736 290 KKAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIEL---EELTRRTDA-RPGSDPRWDS 365 (680)
Q Consensus 290 ~~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~---~~~~~~T~v-~~t~nP~Wne 365 (680)
+....|.|+|+|++|++|+++|..|.+ ||||++.+ +.+.++|++ ++++||+|||
T Consensus 15 y~~~~~~L~v~v~~a~~L~~~d~~g~~----------------------dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne 72 (296)
T 1dqv_A 15 YLYGSDQLVVRILQALDLPAKDSNGFS----------------------DPYVKIYLLPDRKKKFQTKVHRKTLNPIFNE 72 (296)
T ss_dssp CCSSSCEEEEEEEEEECCCCCSTTSCC----------------------CEEEEEECTTSTTSCEECCCCCSCSSCEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCcCCCCCc----------------------CeEEEEEEEcCCCeeEeCCccCCCCCCcEee
Confidence 334569999999999999999876653 99999999 567889998 7899999999
Q ss_pred eEEEEEecC---CCeEEEEEEEeCCCCCCCceeEEEEEe-cccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCC
Q 005736 366 MFNMVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVK-MKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEG 441 (680)
Q Consensus 366 ~f~~~v~~~---~~~l~l~v~d~d~~~~~d~~lG~~~i~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~ 441 (680)
+|.|.+... ...|.|+|||+|.. .+|++||++.++ +.++.... .....|+++..
T Consensus 73 ~f~f~v~~~~l~~~~L~~~V~d~d~~-~~~~~iG~~~i~~l~~~~~~~---------------------~~~~~w~~L~~ 130 (296)
T 1dqv_A 73 TFQFSVPLAELAQRKLHFSVYDFDRF-SRHDLIGQVVLDNLLELAEQP---------------------PDRPLWRDILE 130 (296)
T ss_dssp EEEEECCGGGGSSCCCEEEEEECCSS-SCCCEEEEEECCCTTGGGSSC---------------------SSCCCCEECBC
T ss_pred EEEEEecHHHhcCCEEEEEEEEcCCC-CCCceEEEEEeccccccccCC---------------------ccceeeecccc
Confidence 999998643 34799999999986 689999999996 44443211 11234555533
Q ss_pred -----CceeeEEEEEEEeeeecCCCCCCCCCCcCCCCCcccccccccCCCCcEEEEEEEEeecCCCCCCCCCCCcEEEEE
Q 005736 442 -----VNSGELTVRLVLKEWQFSDGSHSLNNFHSGSQQSLSGSSNFISRTGRKINVTVVEGKDLMPKDKSGKCDPYVKLQ 516 (680)
Q Consensus 442 -----~~~G~l~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~ 516 (680)
...|++.+.+.+. +..+.|.|+|++|++|+.++..+.+||||+++
T Consensus 131 ~~~~~~~~G~i~vsl~y~------------------------------~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~ 180 (296)
T 1dqv_A 131 GGSEKADLGELNFSLCYL------------------------------PTAGLLTVTIIKASNLKAMDLTGFSDPYVKAS 180 (296)
T ss_dssp CSSCCSCCCEEEEEEEEE------------------------------TTTTEEEEEEEEEESCCCCSSSSCCCEEEEEC
T ss_pred ccccccccceEEEEEEec------------------------------cccceeEEEEEEeecCCccCCCCCCCcEEEEE
Confidence 2358888776432 12358999999999999999889999999999
Q ss_pred EC--C---EEEeeecc-CCCCCeeeeEEEEEeeCC---ceEEEEEEEEecCC-CCceeEEEEEEcccccC----------
Q 005736 517 YG--K---IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF-GDENMGSARVNLEGLVE---------- 576 (680)
Q Consensus 517 l~--~---~~~~T~~~-~t~nP~wne~f~f~v~~~---~~~L~i~V~d~~~~-~d~~iG~~~i~L~~l~~---------- 576 (680)
+. + .+++|+++ ++.||.|||+|.|.+... ...|.|+|||++.. ++++||.+.+++.++..
T Consensus 181 l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~ 260 (296)
T 1dqv_A 181 LISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEML 260 (296)
T ss_dssp CCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSS
T ss_pred EEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHH
Confidence 94 2 67899999 999999999999998764 45799999999988 89999999999987532
Q ss_pred ---CCeeeEEEeCCCC
Q 005736 577 ---GSVRDIWVPLEKV 589 (680)
Q Consensus 577 ---~~~~~~w~~L~~~ 589 (680)
+....+|++|...
T Consensus 261 ~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 261 ANPRKPVEHWHQLVEE 276 (296)
T ss_dssp SSSSSCSCSCCCCBBC
T ss_pred hCCCCceeEeeeccCc
Confidence 3345677777653
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.95 E-value=6.9e-28 Score=251.09 Aligned_cols=176 Identities=26% Similarity=0.381 Sum_probs=154.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCEEEeeecc-CCCCCeeeeEEEEEeeCC---ceEEEEEEEEecCC-
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY---GKIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF- 559 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l---~~~~~~T~~~-~t~nP~wne~f~f~v~~~---~~~L~i~V~d~~~~- 559 (680)
+.|.|+|++|++|+.++..+.+||||++++ +++.++|+++ +++||.|||+|.|.+... ...|.|+|||++.+
T Consensus 20 ~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~ 99 (296)
T 1dqv_A 20 DQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFS 99 (296)
T ss_dssp CEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSSS
T ss_pred CEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCCC
Confidence 489999999999999998899999999999 5688999999 999999999999998643 45899999999988
Q ss_pred CCceeEEEEEE-cccccC-CCeeeEEEeCCCC-----CCeEEEEEEEEEEecCCCCCCCccCCCCCceEEEEEEEeecCc
Q 005736 560 GDENMGSARVN-LEGLVE-GSVRDIWVPLEKV-----NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLV 632 (680)
Q Consensus 560 ~d~~iG~~~i~-L~~l~~-~~~~~~w~~L~~~-----~~G~i~l~l~~~~~~~~~~~~~~~~~~~~~~L~V~I~~a~~L~ 632 (680)
+|++||++.++ +.++.. ......|++|... ..|+|.+++.|. +..+.|+|.|++|+||+
T Consensus 100 ~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~--------------~~~~~l~v~v~~a~~L~ 165 (296)
T 1dqv_A 100 RHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYL--------------PTAGLLTVTIIKASNLK 165 (296)
T ss_dssp CCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEE--------------TTTTEEEEEEEEEESCC
T ss_pred CCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEec--------------cccceeEEEEEEeecCC
Confidence 89999999996 555443 3455689999653 359999999998 67799999999999999
Q ss_pred cccCCCCCCCEEEEEEC--C---eEEeeeeeecCCCCcccceeEEEecCC
Q 005736 633 AADLRGTSDPYVKVQYG--D---LKKRTKLTVACLSGHIQNSKSSMASNL 677 (680)
Q Consensus 633 ~~d~~g~~DPyV~v~lg--~---~~~kT~~~k~tlnP~wnE~f~f~V~n~ 677 (680)
++|..|.+||||+|++. + .++||+++++|+||+|||.|.|.|...
T Consensus 166 ~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 215 (296)
T 1dqv_A 166 AMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPE 215 (296)
T ss_dssp CCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSG
T ss_pred ccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHH
Confidence 99999999999999995 2 588999999999999999999998753
No 5
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.78 E-value=1.9e-18 Score=160.97 Aligned_cols=112 Identities=21% Similarity=0.337 Sum_probs=98.9
Q ss_pred CcEEEEEEEEeecCCCCCC----------CCCCCcEEEEEECCEE-Eeeecc-CCCCCeeeeEEEEEeeCCceEEEEEEE
Q 005736 487 GRKINVTVVEGKDLMPKDK----------SGKCDPYVKLQYGKIV-QRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCY 554 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~----------~~~~dpyv~v~l~~~~-~~T~~~-~t~nP~wne~f~f~v~~~~~~L~i~V~ 554 (680)
.|.|+|+|++|++|+++|. .+.+||||++.++++. .+|+++ +|+||.|||+|.|.+.+ ...|.|+||
T Consensus 28 ~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~V~ 106 (157)
T 2fk9_A 28 NGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELAVF 106 (157)
T ss_dssp EEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEEEE
T ss_pred ccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEEEE
Confidence 4699999999999998772 3679999999998754 799999 99999999999999874 468999999
Q ss_pred EecCC-CCceeEEEEEEcccccCC----CeeeEEEeCCCCCCeEEEEEEEEE
Q 005736 555 NEEIF-GDENMGSARVNLEGLVEG----SVRDIWVPLEKVNTGELRLQIEAT 601 (680)
Q Consensus 555 d~~~~-~d~~iG~~~i~L~~l~~~----~~~~~w~~L~~~~~G~i~l~l~~~ 601 (680)
|++.. +|++||.+.|+|.++..+ ...+.||+|++ +|+|+++++|.
T Consensus 107 D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--~G~i~l~l~~~ 156 (157)
T 2fk9_A 107 HETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--EGKVFVVITLT 156 (157)
T ss_dssp ECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--SCEEEEEEEEC
T ss_pred ECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--CcEEEEEEEEE
Confidence 99988 799999999999998854 67899999986 89999999873
No 6
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=6.6e-18 Score=155.19 Aligned_cols=116 Identities=22% Similarity=0.285 Sum_probs=104.1
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEeeecc-CCCCCeeeeEEEEEeeC----CceEEEEEEEEecCC-C
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIG----GGECLMVKCYNEEIF-G 560 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~~~~~T~~~-~t~nP~wne~f~f~v~~----~~~~L~i~V~d~~~~-~ 560 (680)
.+.|.|+|++|++|+..+. +.+||||+++++++.++|+++ ++.||.|||+|.|.+.. ....|.|+|||++.. +
T Consensus 6 ~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~ 84 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQ 84 (140)
T ss_dssp CCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSSS
T ss_pred CcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCCC
Confidence 4699999999999999888 999999999999999999999 99999999999999874 367999999999988 8
Q ss_pred CceeEEEEEEcccccCCCeeeEEEe---CCCCC----CeEEEEEEEEEEe
Q 005736 561 DENMGSARVNLEGLVEGSVRDIWVP---LEKVN----TGELRLQIEATRV 603 (680)
Q Consensus 561 d~~iG~~~i~L~~l~~~~~~~~w~~---L~~~~----~G~i~l~l~~~~~ 603 (680)
|++||++.++|.++..+...+.|++ |.+.. .|+|+++++|.+.
T Consensus 85 ~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 85 NKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp CCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred CceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 9999999999999988888889988 65432 4999999999853
No 7
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.76 E-value=1.7e-17 Score=154.03 Aligned_cols=113 Identities=33% Similarity=0.580 Sum_probs=102.5
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEeeecc-CCCCCeeeeEEEEEeeCCceEEEEEEEEecCC------
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF------ 559 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~~~~~T~~~-~t~nP~wne~f~f~v~~~~~~L~i~V~d~~~~------ 559 (680)
.+.|.|+|++|++|+..+..+.+||||+++++++.++|+++ ++.||.|||+|.|.+..+.+.|.|+|||++..
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~~~~ 95 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKSRVK 95 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHHHHH
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCcccccc
Confidence 46999999999999999988999999999999999999999 99999999999999988778999999999973
Q ss_pred ------CCceeEEEEEEcccccCCCeeeEEEeCCCC-----CCeEEEEEEEEE
Q 005736 560 ------GDENMGSARVNLEGLVEGSVRDIWVPLEKV-----NTGELRLQIEAT 601 (680)
Q Consensus 560 ------~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~-----~~G~i~l~l~~~ 601 (680)
+|++||++.++|.++ ......|++|... ..|+|+++++|.
T Consensus 96 ~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 96 QRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp TTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 799999999999998 4456899999853 469999999874
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.76 E-value=4.7e-18 Score=154.77 Aligned_cols=114 Identities=24% Similarity=0.345 Sum_probs=103.5
Q ss_pred CCcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEeeecc-CCCCCeeeeEEEEEeeCCceEEEEEEEEecCC-CCce
Q 005736 486 TGRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-GDEN 563 (680)
Q Consensus 486 ~~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~~~~~T~~~-~t~nP~wne~f~f~v~~~~~~L~i~V~d~~~~-~d~~ 563 (680)
..+.|.|+|++|++|+..+..+.+||||+++++++.++|+++ ++.||.|||+|.|.+.+....|.|+|||++.. +|++
T Consensus 11 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~~~~~ 90 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPDF 90 (133)
T ss_dssp CSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTEEEEE
T ss_pred CceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCCCCCe
Confidence 346999999999999999988999999999999999999999 99999999999999988788999999999988 8999
Q ss_pred eEEEEEEcccccCCCeeeEEEeCCCC-----CCeEEEEEEEEE
Q 005736 564 MGSARVNLEGLVEGSVRDIWVPLEKV-----NTGELRLQIEAT 601 (680)
Q Consensus 564 iG~~~i~L~~l~~~~~~~~w~~L~~~-----~~G~i~l~l~~~ 601 (680)
||++.++|.++..+. ..|++|... ..|+|+++++|.
T Consensus 91 lG~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 91 LGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp CCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred eEEEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEEE
Confidence 999999999987644 589999753 469999999886
No 9
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.76 E-value=3.9e-18 Score=153.72 Aligned_cols=113 Identities=24% Similarity=0.356 Sum_probs=100.9
Q ss_pred cEEEEEEEEeecCCCC---CCCCCCCcEEEEEECC---EEEeeecc-CCCCCeeeeEEEEEeeC-CceEEEEEEEEecCC
Q 005736 488 RKINVTVVEGKDLMPK---DKSGKCDPYVKLQYGK---IVQRTRTA-HSPNHVWNQKFELDEIG-GGECLMVKCYNEEIF 559 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~---~~~~~~dpyv~v~l~~---~~~~T~~~-~t~nP~wne~f~f~v~~-~~~~L~i~V~d~~~~ 559 (680)
+.|.|+|++|++|+.+ +..+.+||||++++++ +.++|+++ ++.||.|||+|.|.+.. ....|.|+|||++..
T Consensus 3 ~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~ 82 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYV 82 (126)
T ss_dssp EEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCSS
T ss_pred cEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCCC
Confidence 5899999999999874 5568899999999964 89999999 99999999999999964 477899999999987
Q ss_pred CCceeEEEEEEcccccCCCeeeEEEeCCCCCCeEEEEEEEE
Q 005736 560 GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGELRLQIEA 600 (680)
Q Consensus 560 ~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~i~l~l~~ 600 (680)
+|++||++.++|.++..+.....|++|.+..+|+|+++++.
T Consensus 83 ~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~le~ 123 (126)
T 1rlw_A 83 MDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEV 123 (126)
T ss_dssp CCEEEEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEEEEC
T ss_pred CCceeEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEEEEe
Confidence 88999999999999998888999999998777888887754
No 10
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.75 E-value=6.1e-18 Score=154.61 Aligned_cols=118 Identities=25% Similarity=0.363 Sum_probs=105.4
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEeeecc--CCCCCeeeeEEEEEeeCCceEEEEEEEEecCC-CCce
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA--HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-GDEN 563 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~~~~~T~~~--~t~nP~wne~f~f~v~~~~~~L~i~V~d~~~~-~d~~ 563 (680)
.+.|.|+|++|++|+..+..+.+||||+++++++.++|+++ ++.||.|||+|.|.+.+....|.|+|||++.. +|++
T Consensus 9 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~~d~~ 88 (136)
T 1wfj_A 9 HGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDA 88 (136)
T ss_dssp EEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTTTCC
T ss_pred cEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCCCCce
Confidence 46999999999999999988999999999998888999988 69999999999999998788999999999988 8999
Q ss_pred eEEEEEEccccc-CCCeeeEEEeCCC--CCCeEEEEEEEEEEec
Q 005736 564 MGSARVNLEGLV-EGSVRDIWVPLEK--VNTGELRLQIEATRVD 604 (680)
Q Consensus 564 iG~~~i~L~~l~-~~~~~~~w~~L~~--~~~G~i~l~l~~~~~~ 604 (680)
||++.++|.++. .+.....||+|.. ...|+|+++++|.+.+
T Consensus 89 lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 89 VGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp SEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEECC
T ss_pred EEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeCC
Confidence 999999999984 4556789999963 2369999999999654
No 11
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.75 E-value=1.1e-17 Score=156.34 Aligned_cols=117 Identities=26% Similarity=0.328 Sum_probs=96.8
Q ss_pred CCCcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------EEEeeecc-CCCCCeeeeEEEEEeeCCceEEEEEEEEec
Q 005736 485 RTGRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK------IVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEE 557 (680)
Q Consensus 485 ~~~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~------~~~~T~~~-~t~nP~wne~f~f~v~~~~~~L~i~V~d~~ 557 (680)
...+.|+|+|++|++|+..+..+.+||||+++++. ..++|+++ ++.||.|||+|.|.+......|.|+|||++
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~d 96 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDEN 96 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEECC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEECC
Confidence 34569999999999999998889999999999952 68899999 999999999999999887889999999999
Q ss_pred CC-CCceeEEEEEEcccccCCCe------eeEEEeCCCC-----CCeEEEEEEEEE
Q 005736 558 IF-GDENMGSARVNLEGLVEGSV------RDIWVPLEKV-----NTGELRLQIEAT 601 (680)
Q Consensus 558 ~~-~d~~iG~~~i~L~~l~~~~~------~~~w~~L~~~-----~~G~i~l~l~~~ 601 (680)
.. +|++||++.++|.++..+.. ...||+|... ..|+|+++++|.
T Consensus 97 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 97 RLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp SSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred CCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 88 89999999999999876443 2599999753 369999999986
No 12
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.75 E-value=1.2e-17 Score=152.62 Aligned_cols=113 Identities=19% Similarity=0.392 Sum_probs=98.4
Q ss_pred CcEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEECCEE-Eeeecc-CCCCCeeeeEEEEEeeCCceEEEEEE
Q 005736 487 GRKINVTVVEGKDLMPKDKSGK-----------CDPYVKLQYGKIV-QRTRTA-HSPNHVWNQKFELDEIGGGECLMVKC 553 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~-----------~dpyv~v~l~~~~-~~T~~~-~t~nP~wne~f~f~v~~~~~~L~i~V 553 (680)
.+.|+|+|++|++|++.+..+. +||||++.+++.. .+|+++ +|+||.|||+|.|.+.+. ..|.|+|
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V 83 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELAV 83 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEEE
Confidence 3689999999999998774333 9999999997654 699999 999999999999998765 8899999
Q ss_pred EEecCC-CCceeEEEEEEcccccCC--CeeeEEEeCCCCCCeEEEEEEEEEE
Q 005736 554 YNEEIF-GDENMGSARVNLEGLVEG--SVRDIWVPLEKVNTGELRLQIEATR 602 (680)
Q Consensus 554 ~d~~~~-~d~~iG~~~i~L~~l~~~--~~~~~w~~L~~~~~G~i~l~l~~~~ 602 (680)
||++.. +|++||++.++|.++..+ ...+.|++|++ +|+|+++++|.+
T Consensus 84 ~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--~G~i~l~l~~~~ 133 (136)
T 1gmi_A 84 FHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--EGKVYVIIDLSG 133 (136)
T ss_dssp EECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--SCEEEEEEEEEE
T ss_pred EeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--CeEEEEEEEEEe
Confidence 999987 899999999999998864 34589999986 799999999974
No 13
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.73 E-value=9.3e-18 Score=156.24 Aligned_cols=125 Identities=15% Similarity=0.282 Sum_probs=96.3
Q ss_pred cCeEEEEEEEecCCCCCCCCCCC--CcccccccCCCCccccccCCCCCCeEEEEEEccee-eeecc-CCCCCCccceeEE
Q 005736 293 VGGIVYVRVISASKLSRSSLRGS--PSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELT-RRTDA-RPGSDPRWDSMFN 368 (680)
Q Consensus 293 ~~G~L~V~v~~a~~L~~~d~~g~--~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~~-~~T~v-~~t~nP~Wne~f~ 368 (680)
..|.|+|+|++|++|+++|..+. .-+ |..+ .+||||++.++++. .+|++ ++|+||+|||+|.
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~-~~~g-------------~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~ 92 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFK-KGHQ-------------LLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFC 92 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSS-SSCC-------------CCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEE
T ss_pred CccEEEEEEEEEECCCCccccccccccc-cCCC-------------CCCeEEEEEECCEeeEEeeecCCCCCCccCcEEE
Confidence 35999999999999999884210 000 0011 24999999999765 68988 7899999999999
Q ss_pred EEEecCCCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCCCceeeEE
Q 005736 369 MVLHEETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGVNSGELT 448 (680)
Q Consensus 369 ~~v~~~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~G~l~ 448 (680)
|.+.+ .+.|.|+|||+|.. ++|++||++.|+|.++..+. ..+...+.|++|+. .|+|+
T Consensus 93 f~v~~-~~~L~~~V~D~d~~-~~dd~iG~~~i~l~~l~~~~------------------~~~~~~~~W~~L~~--~G~i~ 150 (157)
T 2fk9_A 93 ANVTD-GGHLELAVFHETPL-GYDHFVANCTLQFQELLRTT------------------GASDTFEGWVDLEP--EGKVF 150 (157)
T ss_dssp EEEEE-ECEEEEEEEECCSS-SSCEEEEEEEEEHHHHHHHH------------------TTCSEEEEEEECBS--SCEEE
T ss_pred EEcCC-CCEEEEEEEECCCC-CCCCEEEEEEEEHHHhhccc------------------CCCCcccEEEECCC--CcEEE
Confidence 99976 36899999999986 58999999999999985320 01246788999975 69999
Q ss_pred EEEEE
Q 005736 449 VRLVL 453 (680)
Q Consensus 449 ~~l~l 453 (680)
+++.+
T Consensus 151 l~l~~ 155 (157)
T 2fk9_A 151 VVITL 155 (157)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88765
No 14
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.73 E-value=5e-17 Score=155.46 Aligned_cols=119 Identities=25% Similarity=0.361 Sum_probs=97.2
Q ss_pred CCcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------EEEeeecc-CCCCCeeeeEEEEEeeCCceEEEEEEEEecC
Q 005736 486 TGRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK------IVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEI 558 (680)
Q Consensus 486 ~~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~------~~~~T~~~-~t~nP~wne~f~f~v~~~~~~L~i~V~d~~~ 558 (680)
..+.|+|+|++|++|+.++..+.+||||++++++ ..++|+++ ++.||.|||+|.|.+......|.|+|||++.
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~d~ 85 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDENR 85 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEECC-
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEECCC
Confidence 3569999999999999999889999999999954 68899999 9999999999999998777899999999998
Q ss_pred C-CCceeEEEEEEcccccCCCee-e-----EEEeCCCC-----CCeEEEEEEEEEEec
Q 005736 559 F-GDENMGSARVNLEGLVEGSVR-D-----IWVPLEKV-----NTGELRLQIEATRVD 604 (680)
Q Consensus 559 ~-~d~~iG~~~i~L~~l~~~~~~-~-----~w~~L~~~-----~~G~i~l~l~~~~~~ 604 (680)
. +|++||++.++|.++...... + .||+|... ..|+|++++.|.+..
T Consensus 86 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~~ 143 (176)
T 3m7f_B 86 LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPKN 143 (176)
T ss_dssp ---CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC--
T ss_pred CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeCC
Confidence 8 899999999999998865433 2 89999853 369999999999763
No 15
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.72 E-value=4.5e-17 Score=148.23 Aligned_cols=116 Identities=16% Similarity=0.304 Sum_probs=98.0
Q ss_pred cCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcceeeeecc-CCCCCCccceeEEE
Q 005736 291 KAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELTRRTDA-RPGSDPRWDSMFNM 369 (680)
Q Consensus 291 ~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~~~~T~v-~~t~nP~Wne~f~~ 369 (680)
....|.|+|+|++|++|++.|..|.+ ||||++.++++..+|++ ++++||+|||+|.|
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~d~~g~~----------------------dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f 66 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAADFSGKS----------------------DPFCLLELGNDRLQTHTVYKNLNPEWNKVFTF 66 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCSSSSSCC----------------------CEEEEEEETTEEEECCCCSSCSSCCCCEEEEE
T ss_pred cCCceEEEEEEEeeECCCCCCCCCCc----------------------CeEEEEEECCEEEEeeeecCCCCCccccEEEE
Confidence 34569999999999999999876653 99999999999999998 78999999999999
Q ss_pred EEecCCCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCC-----Cce
Q 005736 370 VLHEETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEG-----VNS 444 (680)
Q Consensus 370 ~v~~~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~-----~~~ 444 (680)
.+.+..+.|.|+|||+|.. ++|++||++.++|.++.... ..|++|.. ...
T Consensus 67 ~~~~~~~~l~i~V~d~d~~-~~~~~lG~~~i~l~~l~~~~------------------------~~w~~L~~~~~~~~~~ 121 (133)
T 2ep6_A 67 PIKDIHDVLEVTVFDEDGD-KPPDFLGKVAIPLLSIRDGQ------------------------PNCYVLKNKDLEQAFK 121 (133)
T ss_dssp EESCTTCEEEEEEEEEETT-EEEEECCBCEEEGGGCCSSC------------------------CEECCCBCSCTTSCCS
T ss_pred EecCCCCEEEEEEEECCCC-CCCCeeEEEEEEHHHccCCC------------------------ceEEEeecCCCCCccc
Confidence 9998778899999999986 58999999999999985321 24666643 246
Q ss_pred eeEEEEEEE
Q 005736 445 GELTVRLVL 453 (680)
Q Consensus 445 G~l~~~l~l 453 (680)
|+|++++.+
T Consensus 122 G~i~l~i~~ 130 (133)
T 2ep6_A 122 GVIYLEMDL 130 (133)
T ss_dssp SEEEEEEEE
T ss_pred eEEEEEEEE
Confidence 999988754
No 16
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.72 E-value=2.8e-17 Score=150.19 Aligned_cols=119 Identities=18% Similarity=0.305 Sum_probs=100.2
Q ss_pred cCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcceeeeecc-C-CCCCCccceeEEEE
Q 005736 293 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELTRRTDA-R-PGSDPRWDSMFNMV 370 (680)
Q Consensus 293 ~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~~~~T~v-~-~t~nP~Wne~f~~~ 370 (680)
+.|.|+|+|++|++|++.|..|.+ ||||++.++.+.++|++ + ++.||+|||+|.|.
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~----------------------dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~ 65 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNM----------------------DPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFT 65 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSS----------------------CCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEE
T ss_pred CcEEEEEEEEeccCCCCcccCCCc----------------------CceEEEEECCccceeEeccCCCCCCccCcEEEEE
Confidence 459999999999999999876643 99999999998889998 6 79999999999999
Q ss_pred EecCCCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccC--CCceeeEE
Q 005736 371 LHEETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFE--GVNSGELT 448 (680)
Q Consensus 371 v~~~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~--~~~~G~l~ 448 (680)
+.+....|.|+|||+|.. .+|++||++.++|.++... |.....|++|. +...|+|+
T Consensus 66 v~~~~~~l~~~V~d~~~~-~~d~~lG~~~i~l~~l~~~---------------------~~~~~~w~~L~~~~~~~G~i~ 123 (136)
T 1wfj_A 66 VSEGTTELKAKIFDKDVG-TEDDAVGEATIPLEPVFVE---------------------GSIPPTAYNVVKDEEYKGEIW 123 (136)
T ss_dssp EESSCCEEEEEECCSSSC-TTTCCSEEEEEESHHHHHH---------------------SEEEEEEEEEEETTEEEEEEE
T ss_pred ECCCCCEEEEEEEECCCC-CCCceEEEEEEEHHHhccC---------------------CCCCcEEEEeecCCccCEEEE
Confidence 998778899999999986 5899999999999998421 22446688774 33479999
Q ss_pred EEEEEee
Q 005736 449 VRLVLKE 455 (680)
Q Consensus 449 ~~l~l~~ 455 (680)
+++.+.+
T Consensus 124 l~l~~~p 130 (136)
T 1wfj_A 124 VALSFKP 130 (136)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9887765
No 17
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.72 E-value=3.9e-17 Score=149.32 Aligned_cols=126 Identities=13% Similarity=0.287 Sum_probs=97.7
Q ss_pred CeEEEEEEEecCCCCCCCCCCCC-cccccccCCCCccccccCCCCCCeEEEEEEccee-eeecc-CCCCCCccceeEEEE
Q 005736 294 GGIVYVRVISASKLSRSSLRGSP-SRRQQNYSADSSLEEHYEDKDLTTFVEIELEELT-RRTDA-RPGSDPRWDSMFNMV 370 (680)
Q Consensus 294 ~G~L~V~v~~a~~L~~~d~~g~~-~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~~-~~T~v-~~t~nP~Wne~f~~~ 370 (680)
.|.|+|+|++|++|++.|..+.. .|+++.+ ..+||||++.++++. .+|++ ++|+||+|||+|.|.
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~------------~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~ 72 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQT------------FLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTD 72 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCC------------CCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCC------------cCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEE
Confidence 49999999999999998754320 1111100 124999999998764 58887 789999999999999
Q ss_pred EecCCCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCCCceeeEEEE
Q 005736 371 LHEETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGVNSGELTVR 450 (680)
Q Consensus 371 v~~~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~G~l~~~ 450 (680)
+.+. +.|.|+|||+|.. .+|++||++.+++.++..+. +...+.|++++. .|+++++
T Consensus 73 v~~~-~~L~~~V~d~d~~-~~dd~iG~~~i~l~~l~~~~--------------------~~~~~~w~~L~~--~G~i~l~ 128 (136)
T 1gmi_A 73 VCNG-RKIELAVFHDAPI-GYDDFVANCTIQFEELLQNG--------------------SRHFEDWIDLEP--EGKVYVI 128 (136)
T ss_dssp EEEE-CEEEEEEEECCSS-SSCEEEEEEEEEHHHHTSTT--------------------CSEEEEEEECBS--SCEEEEE
T ss_pred ecCC-CEEEEEEEeCCCC-CCCCEEEEEEEEHHHhcccC--------------------CCCccEEEEcCC--CeEEEEE
Confidence 9876 7899999999986 58999999999999986432 124578998864 6999998
Q ss_pred EEEee
Q 005736 451 LVLKE 455 (680)
Q Consensus 451 l~l~~ 455 (680)
+.+..
T Consensus 129 l~~~~ 133 (136)
T 1gmi_A 129 IDLSG 133 (136)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87653
No 18
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.71 E-value=1.6e-16 Score=147.34 Aligned_cols=115 Identities=15% Similarity=0.351 Sum_probs=97.8
Q ss_pred CeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcceeeeecc-CCCCCCccceeEEEEEe
Q 005736 294 GGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELTRRTDA-RPGSDPRWDSMFNMVLH 372 (680)
Q Consensus 294 ~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~~~~T~v-~~t~nP~Wne~f~~~v~ 372 (680)
.|.|+|+|++|++|++.|..|.+ ||||++.++++.++|++ ++++||.|||+|.|.+.
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~----------------------dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~ 73 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSS----------------------DPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECH 73 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCC----------------------CEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEEC
T ss_pred ccEEEEEEEeeeCCCCCCCCCCc----------------------CeEEEEEECCEEEECCccCCCCCCCcccEEEEEec
Confidence 49999999999999999876653 99999999999999998 78999999999999998
Q ss_pred cCCCeEEEEEEEeCCC----------CCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCCC
Q 005736 373 EETGTVRFNLYECIPG----------HVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGV 442 (680)
Q Consensus 373 ~~~~~l~l~v~d~d~~----------~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~ 442 (680)
...+.|.|+|||+|.. ..+|++||++.++|.++.. ..+.|++|...
T Consensus 74 ~~~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~------------------------~~~~w~~L~~~ 129 (148)
T 3kwu_A 74 NSSDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLSG------------------------EMDVWYNLDKR 129 (148)
T ss_dssp STTCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCCS------------------------EEEEEEECBCS
T ss_pred CCCCEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCcC------------------------CCCEEEEcccC
Confidence 8888999999999873 1489999999999999831 34568887632
Q ss_pred -----ceeeEEEEEEEe
Q 005736 443 -----NSGELTVRLVLK 454 (680)
Q Consensus 443 -----~~G~l~~~l~l~ 454 (680)
..|+|++++.+.
T Consensus 130 ~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 130 TDKSAVSGAIRLHISVE 146 (148)
T ss_dssp STTCCCCCEEEEEEEEE
T ss_pred CCCCCCceEEEEEEEEE
Confidence 359999888653
No 19
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.70 E-value=1.3e-16 Score=145.31 Aligned_cols=104 Identities=16% Similarity=0.213 Sum_probs=90.7
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCEEEeeecc-CCCCCeeeeEEEEE-eeC---CceEEEEEEEEec
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELD-EIG---GGECLMVKCYNEE 557 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l-----~~~~~~T~~~-~t~nP~wne~f~f~-v~~---~~~~L~i~V~d~~ 557 (680)
+.|.|+|++|+||+. +..+.+||||++++ +...++|+++ +++||.|||+|.|. +.. ....|.|+|||++
T Consensus 20 ~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d 98 (134)
T 2b3r_A 20 GTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAE 98 (134)
T ss_dssp TEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECC
T ss_pred CEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECC
Confidence 589999999999987 66789999999999 3578999999 99999999999999 763 3579999999999
Q ss_pred CC-CCceeEEEEEEcccccCCCeeeEEEeCCCCCCe
Q 005736 558 IF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTG 592 (680)
Q Consensus 558 ~~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G 592 (680)
.. ++++||++.++|.++..+.....||+|.+...|
T Consensus 99 ~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~g 134 (134)
T 2b3r_A 99 SLRENFFLGGITLPLKDFNLSKETVKWYQLTAATYL 134 (134)
T ss_dssp SSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC----
T ss_pred CCCCCcEEEEEEEEhhhccCCCCcceeEECCCccCC
Confidence 88 889999999999999887788999999876543
No 20
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.70 E-value=2e-16 Score=143.70 Aligned_cols=112 Identities=21% Similarity=0.282 Sum_probs=96.6
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--CEEEeeecc-CCCCCeeeeEEEEEeeCCceEEEEEEEEecCC-C---
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYG--KIVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-G--- 560 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~--~~~~~T~~~-~t~nP~wne~f~f~v~~~~~~L~i~V~d~~~~-~--- 560 (680)
..|+|+|++|++|+..+..+.+||||+++++ ++.++|+++ +++||.|||+|.|.+.+.. .|.|+|||++.. +
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~~~ 83 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKKQG 83 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSSTT
T ss_pred EEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCCCC
Confidence 3799999999999999989999999999995 489999999 9999999999999998654 499999999987 4
Q ss_pred CceeEEEEEEccccc-CCCeeeEEEeCCCC-------CCeEEEEEEEE
Q 005736 561 DENMGSARVNLEGLV-EGSVRDIWVPLEKV-------NTGELRLQIEA 600 (680)
Q Consensus 561 d~~iG~~~i~L~~l~-~~~~~~~w~~L~~~-------~~G~i~l~l~~ 600 (680)
|++||++.+++.++. ......+|++|... ..|+|++++++
T Consensus 84 d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 84 AGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 799999999999884 34445688999764 26999998865
No 21
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=2.5e-16 Score=144.83 Aligned_cols=103 Identities=21% Similarity=0.419 Sum_probs=92.6
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCEEEeeecc-CCCCCeeeeEEEEEeeC----CceEEEEEEEEecCC
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY---GKIVQRTRTA-HSPNHVWNQKFELDEIG----GGECLMVKCYNEEIF 559 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l---~~~~~~T~~~-~t~nP~wne~f~f~v~~----~~~~L~i~V~d~~~~ 559 (680)
+.|.|+|++|++|+..+..+.+||||++++ +.+.++|+++ ++.||.|||+|.|.+.. ....|.|+|||++..
T Consensus 26 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~ 105 (141)
T 2d8k_A 26 STLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRF 105 (141)
T ss_dssp CCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSS
T ss_pred CEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCC
Confidence 489999999999999998899999999999 3478999999 99999999999998533 357899999999988
Q ss_pred -CCceeEEEEEEcccccCCCeeeEEEeCCCCC
Q 005736 560 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 590 (680)
Q Consensus 560 -~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 590 (680)
++++||++.++|.++..+.....|++|.+..
T Consensus 106 ~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 106 SRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp SSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred CCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 8999999999999998888889999998754
No 22
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=2.2e-16 Score=147.13 Aligned_cols=102 Identities=25% Similarity=0.455 Sum_probs=92.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCEEEeeecc-CCCCCeeeeEEEEEeeC---CceEEEEEEEEecCC-
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY---GKIVQRTRTA-HSPNHVWNQKFELDEIG---GGECLMVKCYNEEIF- 559 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l---~~~~~~T~~~-~t~nP~wne~f~f~v~~---~~~~L~i~V~d~~~~- 559 (680)
+.|.|+|++|+||+..+..+.+||||++++ +++.++|+++ ++.||.|||+|.|.+.. ....|.|+|||++..
T Consensus 42 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~ 121 (152)
T 1rsy_A 42 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS 121 (152)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS
T ss_pred CEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCCC
Confidence 489999999999999998899999999999 4578899999 99999999999998864 357899999999988
Q ss_pred CCceeEEEEEEcccccCCCeeeEEEeCCCC
Q 005736 560 GDENMGSARVNLEGLVEGSVRDIWVPLEKV 589 (680)
Q Consensus 560 ~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~ 589 (680)
++++||++.++|.++..+...+.||+|.+.
T Consensus 122 ~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 122 KHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp CCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred CCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 899999999999999887788999999863
No 23
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.69 E-value=1.9e-16 Score=147.81 Aligned_cols=105 Identities=24% Similarity=0.411 Sum_probs=91.3
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCEEEeeecc-CCCCCeeeeEEEEEee--CCceEEEEEEEEecC
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEI--GGGECLMVKCYNEEI 558 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l-----~~~~~~T~~~-~t~nP~wne~f~f~v~--~~~~~L~i~V~d~~~ 558 (680)
.+.|.|+|++|++|+..+ .+.+||||++++ ....++|+++ ++.||.|||+|.|.+. +....|.|+|||++.
T Consensus 26 ~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 104 (153)
T 3fbk_A 26 DRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRAS 104 (153)
T ss_dssp SSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCC
Confidence 358999999999999988 689999999999 3467999999 9999999999999984 344569999999998
Q ss_pred C-C-CceeEEEEEEcccccC-CCeeeEEEeCCCCCCe
Q 005736 559 F-G-DENMGSARVNLEGLVE-GSVRDIWVPLEKVNTG 592 (680)
Q Consensus 559 ~-~-d~~iG~~~i~L~~l~~-~~~~~~w~~L~~~~~G 592 (680)
. + |++||++.++|.++.. +.....||+|.+...|
T Consensus 105 ~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 105 QSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLG 141 (153)
T ss_dssp SGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGG
T ss_pred CCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhc
Confidence 7 5 8999999999999985 6778899999986654
No 24
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.69 E-value=1.3e-16 Score=143.59 Aligned_cols=112 Identities=18% Similarity=0.310 Sum_probs=94.1
Q ss_pred CeEEEEEEEecCCCCCC---CCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc---eeeeecc-CCCCCCcccee
Q 005736 294 GGIVYVRVISASKLSRS---SLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE---LTRRTDA-RPGSDPRWDSM 366 (680)
Q Consensus 294 ~G~L~V~v~~a~~L~~~---d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~---~~~~T~v-~~t~nP~Wne~ 366 (680)
.|.|+|+|++|++|+++ |..|. +||||++.++. ..++|++ ++++||+|||+
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~----------------------~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~ 59 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDT----------------------PDPYVELFISTTPDSRKRTRHFNNDINPVWNET 59 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCC----------------------CCEEEEEECTTSTTCCEECCCCTTCSSCEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCC----------------------CCCEEEEEEccCCCceEEccccCCCCCCcccce
Confidence 38999999999999984 44443 39999999984 7889998 78999999999
Q ss_pred EEEEEecC-CCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCCCcee
Q 005736 367 FNMVLHEE-TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGVNSG 445 (680)
Q Consensus 367 f~~~v~~~-~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~G 445 (680)
|.|.+... ...|.|+|||+|.. +|++||++.++|.++.. |...+.|++|.+...|
T Consensus 60 f~f~v~~~~~~~l~i~V~d~d~~--~~~~iG~~~i~l~~l~~----------------------~~~~~~~~~L~~~~~g 115 (126)
T 1rlw_A 60 FEFILDPNQENVLEITLMDANYV--MDETLGTATFTVSSMKV----------------------GEKKEVPFIFNQVTEM 115 (126)
T ss_dssp EEEEECTTSCCEEEEEEEECCSS--CCEEEEEEEEEGGGSCT----------------------TCEEEEEEEETTTEEE
T ss_pred EEEEecCCCCCEEEEEEEECCCC--CCceeEEEEEEHHHccC----------------------CCcEEEEEEcCCCceE
Confidence 99999654 67899999999975 69999999999999853 3466789999887777
Q ss_pred eEEEEE
Q 005736 446 ELTVRL 451 (680)
Q Consensus 446 ~l~~~l 451 (680)
++++++
T Consensus 116 ~i~~~l 121 (126)
T 1rlw_A 116 VLEMSL 121 (126)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777665
No 25
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=2.2e-16 Score=144.90 Aligned_cols=117 Identities=14% Similarity=0.274 Sum_probs=95.8
Q ss_pred cCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcceeeeecc-CCCCCCccceeEEEEE
Q 005736 293 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELTRRTDA-RPGSDPRWDSMFNMVL 371 (680)
Q Consensus 293 ~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~~~~T~v-~~t~nP~Wne~f~~~v 371 (680)
..|.|.|+|++|++|+..|. |.+ ||||++.++++.++|++ ++++||+|||+|.|.+
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~----------------------dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v 61 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKP----------------------DPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDL 61 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCC----------------------CEEEEEECSSCEEECCCCCSCSSCEEEEEEEEEC
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCC----------------------CeEEEEEECCEeEEeeeecCCCCCccCcEEEEEe
Confidence 45999999999999999987 543 99999999999999998 7899999999999998
Q ss_pred ecC----CCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeec---cCCC--
Q 005736 372 HEE----TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVP---FEGV-- 442 (680)
Q Consensus 372 ~~~----~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---l~~~-- 442 (680)
... ...|.|+|||+|.. .+|++||++.++|.++..+. ..+.|++ +.+.
T Consensus 62 ~~~~~~~~~~l~i~V~d~d~~-~~~~~lG~~~i~l~~l~~~~----------------------~~~~w~~l~~l~~~~~ 118 (140)
T 2dmh_A 62 RGIPLDFSSSLGIIVKDFETI-GQNKLIGTATVALKDLTGDQ----------------------SRSLPYKLISLLNEKG 118 (140)
T ss_dssp SSCCCCTTCEEEEEEEETTCS-SSCCCCEEEEEEGGGTCSSS----------------------CEEEEEEEEEEECTTC
T ss_pred cccccCCCCEEEEEEEECCCC-CCCceEEEEEEEHHHhccCC----------------------CceeEEeeeeccCCCC
Confidence 752 46899999999986 58999999999999986442 2344554 4332
Q ss_pred --ceeeEEEEEEEee
Q 005736 443 --NSGELTVRLVLKE 455 (680)
Q Consensus 443 --~~G~l~~~l~l~~ 455 (680)
..|+|++++.+.+
T Consensus 119 ~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 119 QDTGATIDLVIGYDP 133 (140)
T ss_dssp CEEEEEEEEEEEECC
T ss_pred CCCCCEEEEEEEEEC
Confidence 3589998887643
No 26
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.69 E-value=2e-16 Score=145.86 Aligned_cols=102 Identities=25% Similarity=0.435 Sum_probs=92.9
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCEEEeeecc-CCCCCeeeeEEEEEeeCC---ceEEEEEEEEecCC
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQY---GKIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF 559 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l---~~~~~~T~~~-~t~nP~wne~f~f~v~~~---~~~L~i~V~d~~~~ 559 (680)
.+.|.|+|++|++|+..+..+.+||||++++ +.+.++|+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 33 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~ 112 (143)
T 3f04_A 33 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRF 112 (143)
T ss_dssp TTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSS
T ss_pred CCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCC
Confidence 3589999999999999888889999999999 5578999999 999999999999998642 47999999999988
Q ss_pred -CCceeEEEEEEcccccCCCeeeEEEeCCC
Q 005736 560 -GDENMGSARVNLEGLVEGSVRDIWVPLEK 588 (680)
Q Consensus 560 -~d~~iG~~~i~L~~l~~~~~~~~w~~L~~ 588 (680)
+|++||++.++|.++..+.....|++|+.
T Consensus 113 ~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 113 SKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp SCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 89999999999999988888899999975
No 27
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.69 E-value=3e-16 Score=141.91 Aligned_cols=99 Identities=24% Similarity=0.443 Sum_probs=85.3
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCEEEeeecc-CCCCCeeeeEEEEEeeC----CceEEEEEEEEec
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEIG----GGECLMVKCYNEE 557 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l-----~~~~~~T~~~-~t~nP~wne~f~f~v~~----~~~~L~i~V~d~~ 557 (680)
+.|.|+|++|+||+..+..+.+||||++++ +...++|+++ ++.||.|||+|.|.+.. ....|.|+|||++
T Consensus 18 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d 97 (129)
T 2bwq_A 18 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQA 97 (129)
T ss_dssp TEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC-
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECC
Confidence 589999999999999998899999999999 4589999999 99999999999999532 3579999999999
Q ss_pred CC-C--CceeEEEEEEcccccCCCeeeEEEeCC
Q 005736 558 IF-G--DENMGSARVNLEGLVEGSVRDIWVPLE 587 (680)
Q Consensus 558 ~~-~--d~~iG~~~i~L~~l~~~~~~~~w~~L~ 587 (680)
.. + +++||++.++|.++.... .+.||+|+
T Consensus 98 ~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 98 RVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp ------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred cCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 88 5 899999999999987654 78999985
No 28
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.68 E-value=1.3e-16 Score=145.82 Aligned_cols=105 Identities=30% Similarity=0.488 Sum_probs=93.6
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCEEEeeecc-CCCCCeeeeEEEEEeeCC--ceEEEEEEEEecCC
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEIGG--GECLMVKCYNEEIF 559 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l-----~~~~~~T~~~-~t~nP~wne~f~f~v~~~--~~~L~i~V~d~~~~ 559 (680)
+.|.|+|++|++|+..+..+.+||||++++ +...++|+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 16 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~~ 95 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRT 95 (137)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCCC
Confidence 489999999999999998899999999999 5678999999 999999999999998753 46899999999988
Q ss_pred -CCceeEEEEEEcccccCCCeeeEEEeCCCCCCeE
Q 005736 560 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGE 593 (680)
Q Consensus 560 -~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~ 593 (680)
++++||++.++|.++..+. ...||+|.+...|+
T Consensus 96 ~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g~ 129 (137)
T 3rdl_A 96 TRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEGE 129 (137)
T ss_dssp SCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHHT
T ss_pred CCCceEEEEEEeHHHhccCc-cCceEECcCccccc
Confidence 8999999999999997665 78999998765553
No 29
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.68 E-value=2e-16 Score=145.29 Aligned_cols=104 Identities=24% Similarity=0.433 Sum_probs=91.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCEEEeeecc-CCCCCeeeeEEEEEe-eC---CceEEEEEEEEec
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDE-IG---GGECLMVKCYNEE 557 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l-----~~~~~~T~~~-~t~nP~wne~f~f~v-~~---~~~~L~i~V~d~~ 557 (680)
+.|.|+|++|++|+.++..+.+||||++++ +.+.++|+++ ++.||.|||+|.|.+ .. ....|.|+|||++
T Consensus 21 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 100 (141)
T 1v27_A 21 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQA 100 (141)
T ss_dssp TEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBC
T ss_pred CEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECC
Confidence 489999999999999998899999999999 4578999999 999999999999995 32 2579999999999
Q ss_pred CC-C--CceeEEEEEEcccccCCCeeeEEEeCCCCCCe
Q 005736 558 IF-G--DENMGSARVNLEGLVEGSVRDIWVPLEKVNTG 592 (680)
Q Consensus 558 ~~-~--d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G 592 (680)
.. + +++||++.++|.++.... ...||+|.+...|
T Consensus 101 ~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~g 137 (141)
T 1v27_A 101 RVREEESEFLGEILIELETALLDD-EPHWYKLQTHDSG 137 (141)
T ss_dssp SSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSSC
T ss_pred CCcCCCCceEEEEEEEccccCCCC-CCceEECcccccC
Confidence 88 5 899999999999987654 7899999986655
No 30
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.68 E-value=1.8e-16 Score=150.75 Aligned_cols=117 Identities=15% Similarity=0.245 Sum_probs=98.9
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEeeecc-CCCCCeeeeEEEEEeeCCceEEEEEEEEecCC-CCcee
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-GDENM 564 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~~~~~T~~~-~t~nP~wne~f~f~v~~~~~~L~i~V~d~~~~-~d~~i 564 (680)
.+.|.|+|++|++|+..+..+.+||||+++++++.++|+++ +++||.|||+|.|.+. +...|.|+|||++.. +|++|
T Consensus 35 ~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~~dd~l 113 (173)
T 2nq3_A 35 KSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLKSDVLL 113 (173)
T ss_dssp CEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSSCCEEE
T ss_pred ceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCCCCceE
Confidence 45899999999999844434559999999998899999999 9999999999999985 588999999999988 89999
Q ss_pred EEEEEEcccccCCC-----eeeEEEeCCCC-----CCeEEEEEEEEEEec
Q 005736 565 GSARVNLEGLVEGS-----VRDIWVPLEKV-----NTGELRLQIEATRVD 604 (680)
Q Consensus 565 G~~~i~L~~l~~~~-----~~~~w~~L~~~-----~~G~i~l~l~~~~~~ 604 (680)
|++.++|.++.... ....|++|... ..|+|.+++.|.+++
T Consensus 114 G~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~~ 163 (173)
T 2nq3_A 114 GTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQLE 163 (173)
T ss_dssp EEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEECC
T ss_pred EEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeecc
Confidence 99999999986421 23679999764 369999999998663
No 31
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.68 E-value=2e-16 Score=146.82 Aligned_cols=104 Identities=17% Similarity=0.249 Sum_probs=91.6
Q ss_pred CcEEEEEEEEeecCCCCC-CCCCCCcEEEEEEC-----CEEEeeecc-CCCCCeeeeEEEEEeeCC---ceEEEEEEEEe
Q 005736 487 GRKINVTVVEGKDLMPKD-KSGKCDPYVKLQYG-----KIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNE 556 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~-~~~~~dpyv~v~l~-----~~~~~T~~~-~t~nP~wne~f~f~v~~~---~~~L~i~V~d~ 556 (680)
.+.|.|+|++|+||+..+ ..+.+||||++++. ...++|+++ ++.||.|||+|.|.+... ...|.|+|||+
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~ 101 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHH 101 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEEC
Confidence 358999999999999887 57899999999994 358999999 999999999999998763 55899999999
Q ss_pred cCC-CCceeEEEEEEcccccCCCeeeEEEeCCCCC
Q 005736 557 EIF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 590 (680)
Q Consensus 557 ~~~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 590 (680)
+.. ++++||++.++|.++..+.....||+|.++.
T Consensus 102 d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 102 GRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp CGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred CCCcCCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 988 8999999999999998776778999998753
No 32
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.67 E-value=2.2e-16 Score=147.34 Aligned_cols=100 Identities=17% Similarity=0.213 Sum_probs=89.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------EEEeeecc-CCCCCeeeeEEEEEeeCC---ceEEEEEEEEec
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK------IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEE 557 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~------~~~~T~~~-~t~nP~wne~f~f~v~~~---~~~L~i~V~d~~ 557 (680)
+.|.|+|++|+||++++..+.+||||++++.. .+++|+++ +|+||+|||+|.|.+... ...|.|+|||++
T Consensus 43 ~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d 122 (155)
T 2z0u_A 43 KQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTD 122 (155)
T ss_dssp TEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEEC
T ss_pred CEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECC
Confidence 48999999999999999899999999999943 37999999 999999999999998752 568999999999
Q ss_pred CC-CCceeEEEEEEcccccC-CCeeeEEEeCC
Q 005736 558 IF-GDENMGSARVNLEGLVE-GSVRDIWVPLE 587 (680)
Q Consensus 558 ~~-~d~~iG~~~i~L~~l~~-~~~~~~w~~L~ 587 (680)
.. ++++||++.++|+++.. +.....||+|.
T Consensus 123 ~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 123 RSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp TTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 88 89999999999999963 66778999985
No 33
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.67 E-value=6.1e-16 Score=144.30 Aligned_cols=123 Identities=16% Similarity=0.298 Sum_probs=92.4
Q ss_pred CcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc------eeeeecc-CCCCCCccc
Q 005736 292 AVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE------LTRRTDA-RPGSDPRWD 364 (680)
Q Consensus 292 ~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~------~~~~T~v-~~t~nP~Wn 364 (680)
...|.|+|+|++|++|++.|..|.+ ||||++.++. ..++|++ ++++||+||
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~----------------------dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wn 74 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGAS----------------------DPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWN 74 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------C----------------------CEEEEEEEEETTTEEEEEEECCCCSSCSSCCCC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCC----------------------CcEEEEEEECCCCccceeeeCccccCCCCCCCC
Confidence 3459999999999999998866643 9999999973 5778998 789999999
Q ss_pred eeEEEEEecCCCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCCC--
Q 005736 365 SMFNMVLHEETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGV-- 442 (680)
Q Consensus 365 e~f~~~v~~~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~-- 442 (680)
|+|.|.+......|.|+|||+|.. ++|++||++.++|.++...... . .......|++|...
T Consensus 75 e~f~f~v~~~~~~l~~~V~d~d~~-~~d~~iG~~~i~l~~l~~~~~~--------------~--~~~~~~~w~~L~~~~~ 137 (153)
T 3b7y_A 75 EEILFRVHPQQHRLLFEVFDENRL-TRDDFLGQVDVPLYPLPTENPR--------------L--ERPYTFKDFVLHPRSH 137 (153)
T ss_dssp EEEEEEECTTTCEEEEEEEECCSS-SCCEEEEEEEEECCSCCBCCTT--------------S--CCCCCCEEEECBCSST
T ss_pred CEEEEEecCCCCEEEEEEEECCCC-cCCCeeEEEEEEHHHcccCCCc--------------c--cccccccccccccccC
Confidence 999999988778899999999986 5899999999999998644210 0 00112467777542
Q ss_pred ---ceeeEEEEEEE
Q 005736 443 ---NSGELTVRLVL 453 (680)
Q Consensus 443 ---~~G~l~~~l~l 453 (680)
..|+|++++.+
T Consensus 138 ~~~~~G~i~l~l~~ 151 (153)
T 3b7y_A 138 KSRVKGYLRLKMTY 151 (153)
T ss_dssp TCCCCSEEEEEEEE
T ss_pred CCCcceEEEEEEEE
Confidence 36999988865
No 34
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.66 E-value=2.1e-16 Score=145.44 Aligned_cols=103 Identities=22% Similarity=0.411 Sum_probs=91.2
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC--------------EEEeeecc-CCCCCeeeeEEEEE-eeC---CceE
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK--------------IVQRTRTA-HSPNHVWNQKFELD-EIG---GGEC 548 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~--------------~~~~T~~~-~t~nP~wne~f~f~-v~~---~~~~ 548 (680)
+.|.|+|++|+||+.++..+.+||||+++++. ..++|+++ ++.||.|||+|.|. +.. ....
T Consensus 18 ~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~ 97 (142)
T 1rh8_A 18 GNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKT 97 (142)
T ss_dssp TEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCE
T ss_pred CEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCE
Confidence 48999999999999999889999999999954 25789999 99999999999997 542 3678
Q ss_pred EEEEEEEecCC-CCceeEEEEEEcccccCCCeeeEEEeCCCCC
Q 005736 549 LMVKCYNEEIF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 590 (680)
Q Consensus 549 L~i~V~d~~~~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 590 (680)
|.|+|||++.. ++++||++.++|.++........||+|.+..
T Consensus 98 l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 98 LEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred EEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 99999999988 8999999999999988766778999998754
No 35
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.66 E-value=1.5e-16 Score=147.74 Aligned_cols=106 Identities=30% Similarity=0.454 Sum_probs=93.9
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CEEEeeecc-CCCCCeeeeEEEEEeeCC--ceEEEEEEEEecCC
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYG-----KIVQRTRTA-HSPNHVWNQKFELDEIGG--GECLMVKCYNEEIF 559 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~-----~~~~~T~~~-~t~nP~wne~f~f~v~~~--~~~L~i~V~d~~~~ 559 (680)
+.|.|+|++|++|+..+..+.+||||++++. ...++|+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 31 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~ 110 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLT 110 (149)
T ss_dssp SEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCCC
Confidence 4899999999999999988999999999994 478999999 999999999999998763 56899999999988
Q ss_pred -CCceeEEEEEEcccccCCCeeeEEEeCCCCCCeEE
Q 005736 560 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGEL 594 (680)
Q Consensus 560 -~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~i 594 (680)
++++||++.++|.++..+ ..+.||+|.+...|++
T Consensus 111 ~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~g~~ 145 (149)
T 1a25_A 111 SRNDFMGSLSFGISELQKA-GVDGWFKLLSQEEGEY 145 (149)
T ss_dssp SCCEEEEEEEEEHHHHTTC-CEEEEEECBCHHHHTT
T ss_pred CCCCEEEEEEEEHHHhCcC-ccCCeEEccCCCCCcc
Confidence 899999999999998765 4779999987655543
No 36
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.66 E-value=1.1e-15 Score=140.68 Aligned_cols=102 Identities=29% Similarity=0.496 Sum_probs=91.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----EEEeeecc-CCCCCeeeeEEEEE-eeCC---ceEEEEEEEEec
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK-----IVQRTRTA-HSPNHVWNQKFELD-EIGG---GECLMVKCYNEE 557 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~-----~~~~T~~~-~t~nP~wne~f~f~-v~~~---~~~L~i~V~d~~ 557 (680)
+.|.|+|++|++|+..+..+.+||||++++.. ..++|+++ ++.||.|||+|.|. +... ...|.|+|||++
T Consensus 29 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 108 (142)
T 2chd_A 29 SNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDED 108 (142)
T ss_dssp TEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEEC
T ss_pred CEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECC
Confidence 48999999999999999889999999999953 78999999 99999999999998 5432 478999999999
Q ss_pred CC-CCceeEEEEEEcccccCCCeeeEEEeCCCC
Q 005736 558 IF-GDENMGSARVNLEGLVEGSVRDIWVPLEKV 589 (680)
Q Consensus 558 ~~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~ 589 (680)
.. ++++||++.++|.++..+.....|++|+..
T Consensus 109 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~p 141 (142)
T 2chd_A 109 KFGHNEFIGETRFSLKKLKANQRKNFNICLERV 141 (142)
T ss_dssp TTSCEEEEEEEEEEGGGCCTTCCEEEEEECBCC
T ss_pred CCCCCcEEEEEEEEHHHcCCCCccEEEEecccC
Confidence 88 789999999999999988888999999863
No 37
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.66 E-value=9.3e-16 Score=146.61 Aligned_cols=124 Identities=15% Similarity=0.276 Sum_probs=92.3
Q ss_pred cCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc------eeeeecc-CCCCCCccce
Q 005736 293 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE------LTRRTDA-RPGSDPRWDS 365 (680)
Q Consensus 293 ~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~------~~~~T~v-~~t~nP~Wne 365 (680)
..|.|+|+|++|++|++.|..|.+ ||||++.++. ..++|++ ++++||+|||
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~----------------------DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne 63 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGAS----------------------DPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNE 63 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCC----------------------CEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEE
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCc----------------------CcEEEEEEECCCCCcccceeCceECCCCCCcccc
Confidence 459999999999999999876653 9999999985 5789998 7999999999
Q ss_pred eEEEEEecCCCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCCC---
Q 005736 366 MFNMVLHEETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGV--- 442 (680)
Q Consensus 366 ~f~~~v~~~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~--- 442 (680)
+|.|.+......|.|+|||+|.. .+|++||++.++|.++...... .+ ......|++|...
T Consensus 64 ~f~f~v~~~~~~L~~~V~d~d~~-~~d~~lG~~~i~l~~l~~~~~~--------------~~--~~~~~~w~~L~~~~~~ 126 (176)
T 3m7f_B 64 EILFRVLPQRHRILFEVFDENRL-TRDDFLGQVDVPLYPLPTENPR--------------ME--RPYTFKDFVLHPRSHK 126 (176)
T ss_dssp EEEEEECTTTCEEEEEEEECC-----CEEEEEEEEESCSCCBC----------------------CCCCEEEECBCSSTT
T ss_pred eEEEEEcCCCCEEEEEEEECCCC-CCCcEEEEEEEEHHHccccCCc--------------cc--ccccccEEEccccCCC
Confidence 99999987778899999999986 5899999999999998643210 00 0001157777542
Q ss_pred --ceeeEEEEEEEee
Q 005736 443 --NSGELTVRLVLKE 455 (680)
Q Consensus 443 --~~G~l~~~l~l~~ 455 (680)
..|+|++++.+.+
T Consensus 127 ~~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 127 SRVKGYLRLKMTYLP 141 (176)
T ss_dssp CCCCSEEEEEEEECC
T ss_pred CccCEEEEEEEEEEe
Confidence 2699999987654
No 38
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.65 E-value=1.1e-15 Score=139.90 Aligned_cols=101 Identities=19% Similarity=0.273 Sum_probs=88.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---C-EEEeeecc-CCCCCeeeeEEEEEeeCC---ceEEEEEEEEecCC
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYG---K-IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF 559 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~---~-~~~~T~~~-~t~nP~wne~f~f~v~~~---~~~L~i~V~d~~~~ 559 (680)
+.|.|+|++|++ ++..+.+||||++++. + ..++|+++ +++||.|||+|.|.+... ...|.|+|||++..
T Consensus 26 ~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~ 102 (138)
T 1wfm_A 26 AELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRF 102 (138)
T ss_dssp TEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSS
T ss_pred CEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCC
Confidence 489999999994 5677899999999992 2 46899999 999999999999998753 56899999999988
Q ss_pred -CCceeEEEEEEcccccCCCeeeEEEeCCCCCC
Q 005736 560 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVNT 591 (680)
Q Consensus 560 -~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~ 591 (680)
+|++||++.++|.++..+.....|++|.+..+
T Consensus 103 ~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 103 SRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP 135 (138)
T ss_dssp CTTSCSEEEEEESSSSSSCTTCCEEEECCCCSC
T ss_pred CCCcEEEEEEEEcccccCcccccceeeCcCCCc
Confidence 89999999999999976667789999987543
No 39
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=9.4e-16 Score=142.00 Aligned_cols=104 Identities=19% Similarity=0.272 Sum_probs=89.6
Q ss_pred CcEEEEEEEEeecCCCC-CC------CCCCCcEEEEEEC---CEEEeeecc-CCCCCeeeeEEEEEeeCC---ceEEEEE
Q 005736 487 GRKINVTVVEGKDLMPK-DK------SGKCDPYVKLQYG---KIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVK 552 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~-~~------~~~~dpyv~v~l~---~~~~~T~~~-~t~nP~wne~f~f~v~~~---~~~L~i~ 552 (680)
.+.|.|+|++|+||+.. +. .+.+||||++++. ++.++|+++ ++.||.|||+|.|.+... ...|.|+
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~ 104 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLT 104 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEE
T ss_pred CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEE
Confidence 35899999999999874 33 3589999999994 468899999 999999999999998642 4689999
Q ss_pred EEEecCC-CCceeEEEEEEcccccCCCeeeEEEeCCCCC
Q 005736 553 CYNEEIF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 590 (680)
Q Consensus 553 V~d~~~~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 590 (680)
|||++.. ++++||++.++|.++........|++|++..
T Consensus 105 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~ 143 (147)
T 2enp_A 105 VVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPSG 143 (147)
T ss_dssp EECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCCC
T ss_pred EEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecCC
Confidence 9999988 8899999999999998777778999998753
No 40
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.64 E-value=3.3e-15 Score=136.57 Aligned_cols=101 Identities=19% Similarity=0.338 Sum_probs=86.3
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----EEEeeecc-CCCCCeeeeEEEEEeeCC---ceEEEEEEEEec
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK-----IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEE 557 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~-----~~~~T~~~-~t~nP~wne~f~f~v~~~---~~~L~i~V~d~~ 557 (680)
.+.|.|+|++|++|+..+..+.+||||++++.. ..++|+++ ++.||.|||+|.|.+... ...|.|+|||++
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~ 94 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKD 94 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECC
T ss_pred CCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECC
Confidence 358999999999999999889999999999942 58899999 999999999999998754 378999999999
Q ss_pred CC-CCceeEEEEEEccccc------------CCCeeeEEEeCC
Q 005736 558 IF-GDENMGSARVNLEGLV------------EGSVRDIWVPLE 587 (680)
Q Consensus 558 ~~-~d~~iG~~~i~L~~l~------------~~~~~~~w~~L~ 587 (680)
.. +|++||++.++|.++. .+....+|++|.
T Consensus 95 ~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~ 137 (138)
T 3n5a_A 95 KLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPVAQWHQLK 137 (138)
T ss_dssp SSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred CCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCeEEEEeecC
Confidence 88 8999999999998643 233556777765
No 41
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=5.1e-15 Score=135.47 Aligned_cols=102 Identities=18% Similarity=0.208 Sum_probs=88.9
Q ss_pred cEEEEEEEEeecCCCCCCC-CCCCcEEEEEEC---CEEEeeecc-CCCCCeeeeEEEEE-eeC---CceEEEEEEEEecC
Q 005736 488 RKINVTVVEGKDLMPKDKS-GKCDPYVKLQYG---KIVQRTRTA-HSPNHVWNQKFELD-EIG---GGECLMVKCYNEEI 558 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~-~~~dpyv~v~l~---~~~~~T~~~-~t~nP~wne~f~f~-v~~---~~~~L~i~V~d~~~ 558 (680)
+.|.|+|++|+||+.++.. +.+||||++++. .+.++|+++ ++.||.|||+|.|. +.. ....|.|+|||++.
T Consensus 22 ~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~ 101 (138)
T 1ugk_A 22 KAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDR 101 (138)
T ss_dssp TEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCC
Confidence 4899999999999999874 889999999994 489999999 99999999999996 654 24689999999998
Q ss_pred C-CCceeEEEEEEcccccCCC-eeeEEEeCCCC
Q 005736 559 F-GDENMGSARVNLEGLVEGS-VRDIWVPLEKV 589 (680)
Q Consensus 559 ~-~d~~iG~~~i~L~~l~~~~-~~~~w~~L~~~ 589 (680)
. +|++||++.++|.++..+. ....|++|...
T Consensus 102 ~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 102 FSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp SCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred CCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 8 8999999999999998644 44678999864
No 42
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=1.5e-15 Score=139.71 Aligned_cols=102 Identities=23% Similarity=0.284 Sum_probs=89.3
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CEEEeeecc-CCCCCeeeeEEEEEeeC---CceEEEEEEEEecC
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYG-----KIVQRTRTA-HSPNHVWNQKFELDEIG---GGECLMVKCYNEEI 558 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~-----~~~~~T~~~-~t~nP~wne~f~f~v~~---~~~~L~i~V~d~~~ 558 (680)
+.|.|+|++|+||+.++..+ +||||++++. ...++|+++ ++.||.|||+|.|.+.. ....|.|+|||++.
T Consensus 24 ~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 102 (142)
T 2dmg_A 24 NKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGG 102 (142)
T ss_dssp TEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCC
T ss_pred CEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCC
Confidence 48999999999999999888 9999999992 268899999 99999999999999864 24589999999997
Q ss_pred C-C--CceeEEEEEEcccccCCCeeeEEEeCCCCC
Q 005736 559 F-G--DENMGSARVNLEGLVEGSVRDIWVPLEKVN 590 (680)
Q Consensus 559 ~-~--d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 590 (680)
. . +++||++.++|.++..+.....||+|.+..
T Consensus 103 ~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 103 FLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS 137 (142)
T ss_dssp SSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred ccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence 6 3 469999999999988766788999998753
No 43
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.63 E-value=1e-15 Score=145.56 Aligned_cols=103 Identities=25% Similarity=0.308 Sum_probs=91.6
Q ss_pred cEEEEEEEEeecCCCCCC-CCCCCcEEEEEEC--C---EEEeeecc-CCCCCeeeeEEEEEeeCCceEEEEEEE-EecCC
Q 005736 488 RKINVTVVEGKDLMPKDK-SGKCDPYVKLQYG--K---IVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCY-NEEIF 559 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~-~~~~dpyv~v~l~--~---~~~~T~~~-~t~nP~wne~f~f~v~~~~~~L~i~V~-d~~~~ 559 (680)
+.|.|+|++|+||+.++. .+.+||||++++. + ..++|+++ ++.||.|||+|.|.+......|.|+|| |++..
T Consensus 30 ~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~~ 109 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRM 109 (171)
T ss_dssp TEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECSTT
T ss_pred CEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCCC
Confidence 489999999999999885 6899999999993 2 48899999 999999999999998777889999999 99888
Q ss_pred -CCceeEEEEEEcccccCCCeeeEEEeCCCCC
Q 005736 560 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 590 (680)
Q Consensus 560 -~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 590 (680)
+|++||++.++|.++..+.....||+|.+..
T Consensus 110 ~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 110 DHKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp CSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred CCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 8899999999999998777889999998753
No 44
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.63 E-value=2.1e-15 Score=137.33 Aligned_cols=105 Identities=12% Similarity=0.187 Sum_probs=85.6
Q ss_pred cCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEE-----cceeeeecc-CCCCCCcccee
Q 005736 293 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIEL-----EELTRRTDA-RPGSDPRWDSM 366 (680)
Q Consensus 293 ~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~-----~~~~~~T~v-~~t~nP~Wne~ 366 (680)
..|.|.|+|++|++|+. +..|. +||||++.+ +...++|++ ++++||+|||+
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~----------------------~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~ 74 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGAD----------------------PNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEM 74 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCC----------------------CCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCC----------------------CCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccE
Confidence 45999999999999997 54444 399999999 356789998 79999999999
Q ss_pred EEEE-Eec---CCCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCCC
Q 005736 367 FNMV-LHE---ETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGV 442 (680)
Q Consensus 367 f~~~-v~~---~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~ 442 (680)
|.|. +.. ....|.|+|||+|.. ++|++||++.++|.++..+ ...+.|++|.+.
T Consensus 75 f~f~~v~~~~l~~~~L~~~V~d~d~~-~~~~~lG~~~i~l~~l~~~----------------------~~~~~W~~L~~~ 131 (134)
T 2b3r_A 75 LVYSGYSKETLRQRELQLSVLSAESL-RENFFLGGITLPLKDFNLS----------------------KETVKWYQLTAA 131 (134)
T ss_dssp EEEESCCHHHHTTCEEEEEEEECCSS-SCCEEEEEEEEEGGGSCTT----------------------SCEEEEEECBC-
T ss_pred EEECCcCHHHhCcCEEEEEEEECCCC-CCCcEEEEEEEEhhhccCC----------------------CCcceeEECCCc
Confidence 9999 764 246899999999986 5899999999999998642 245678888765
Q ss_pred c
Q 005736 443 N 443 (680)
Q Consensus 443 ~ 443 (680)
.
T Consensus 132 ~ 132 (134)
T 2b3r_A 132 T 132 (134)
T ss_dssp -
T ss_pred c
Confidence 4
No 45
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.62 E-value=7.1e-15 Score=138.01 Aligned_cols=104 Identities=20% Similarity=0.317 Sum_probs=89.3
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---EEEeeecc-CCCCCeeeeEEEEEeeCC---ceEEEEEEEEec
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYG--K---IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEE 557 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~--~---~~~~T~~~-~t~nP~wne~f~f~v~~~---~~~L~i~V~d~~ 557 (680)
.+.|.|+|++|+||+..+..+.+||||++++. + ..++|+++ ++.||.|||+|.|.+... ...|.|+|||++
T Consensus 24 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d 103 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYD 103 (159)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECC
Confidence 35899999999999999988999999999994 2 57899999 999999999999998753 468999999999
Q ss_pred CC-CCceeEEEEEEcccc----------c--CCCeeeEEEeCCCCC
Q 005736 558 IF-GDENMGSARVNLEGL----------V--EGSVRDIWVPLEKVN 590 (680)
Q Consensus 558 ~~-~d~~iG~~~i~L~~l----------~--~~~~~~~w~~L~~~~ 590 (680)
.. ++++||++.+++..+ . .+....+|++|....
T Consensus 104 ~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 104 KIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEE 149 (159)
T ss_dssp SSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCHH
T ss_pred CCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCcc
Confidence 88 899999999999853 2 244668999998643
No 46
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.61 E-value=2.9e-15 Score=136.05 Aligned_cols=88 Identities=15% Similarity=0.344 Sum_probs=77.3
Q ss_pred eEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc--eeeeecc-CCCCCCccceeEEEEE
Q 005736 295 GIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE--LTRRTDA-RPGSDPRWDSMFNMVL 371 (680)
Q Consensus 295 G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~--~~~~T~v-~~t~nP~Wne~f~~~v 371 (680)
..|+|+|++|++|++.|..|.+ ||||++.++. +.++|++ ++++||+|||+|.|.+
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~s----------------------Dpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v 62 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRLP----------------------DPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYV 62 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCCC----------------------CEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEE
T ss_pred EEEEEEEEEeECCCCCCCCCCc----------------------CeEEEEEECCCCceEECCccCCCCCCCccCEEEEEe
Confidence 6899999999999999877654 9999999974 7889998 7999999999999999
Q ss_pred ecCCCeEEEEEEEeCCCCCC---CceeEEEEEeccccc
Q 005736 372 HEETGTVRFNLYECIPGHVK---YDYLTSCEVKMKYVA 406 (680)
Q Consensus 372 ~~~~~~l~l~v~d~d~~~~~---d~~lG~~~i~l~~l~ 406 (680)
.+.. .|.|+|||+|.. ++ |++||++.+++.++.
T Consensus 63 ~~~~-~l~~~v~d~d~~-~~~~~d~~lG~~~i~l~~l~ 98 (132)
T 3pyc_A 63 GKTD-SITISVWNHKKI-HKKQGAGFLGCVRLLSNAIS 98 (132)
T ss_dssp ETTC-CEEEEEEEGGGT-TSSTTTTEEEEEEECHHHHH
T ss_pred CCCC-EEEEEEEECCCC-CCCCCCCceEEEEEeHHHhh
Confidence 8753 599999999986 34 899999999998873
No 47
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.61 E-value=2.1e-15 Score=143.34 Aligned_cols=119 Identities=15% Similarity=0.248 Sum_probs=91.8
Q ss_pred CeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcceeeeecc-CCCCCCccceeEEEEEe
Q 005736 294 GGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELTRRTDA-RPGSDPRWDSMFNMVLH 372 (680)
Q Consensus 294 ~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~~~~T~v-~~t~nP~Wne~f~~~v~ 372 (680)
.+.|+|+|++|++|++.+..+. +||||++.++++.++|++ ++++||+|||+|.|.+.
T Consensus 35 ~~~L~V~V~~A~~L~~~~~~~~----------------------sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~ 92 (173)
T 2nq3_A 35 KSQLQITVISAKLKENKKNWFG----------------------PSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT 92 (173)
T ss_dssp CEEEEEEEEEEEECCCC--CCC----------------------CCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC
T ss_pred ceEEEEEEEEeECCCCcccCCC----------------------CCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC
Confidence 4899999999999994432232 299999999999999998 79999999999999985
Q ss_pred cCCCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCCC-----ceeeE
Q 005736 373 EETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGV-----NSGEL 447 (680)
Q Consensus 373 ~~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~-----~~G~l 447 (680)
. .+.|.|+|||+|.. ++|++||++.++|.++...... .......|++|... ..|+|
T Consensus 93 ~-~~~L~~~V~D~d~~-~~dd~lG~~~i~l~~l~~~~~~-----------------~~~~~~~~~~L~~~~~~~~~~G~L 153 (173)
T 2nq3_A 93 P-VSKLHFRVWSHQTL-KSDVLLGTAALDIYETLKSNNM-----------------KLEEVVVTLQLGGDKEPTETIGDL 153 (173)
T ss_dssp T-TCEEEEEEEECCSS-SCCEEEEEEEEEHHHHHHHTTT-----------------EESSEEEEEEEEESSCTTSEEEEE
T ss_pred C-CCEEEEEEEECCCC-CCCceEEEEEEEHHHhcccCCC-----------------CcceeEEEEECccCCCCCcccEEE
Confidence 4 77899999999986 5899999999999998532110 00123557776543 36888
Q ss_pred EEEEEE
Q 005736 448 TVRLVL 453 (680)
Q Consensus 448 ~~~l~l 453 (680)
.+.+.+
T Consensus 154 ~v~l~~ 159 (173)
T 2nq3_A 154 SICLDG 159 (173)
T ss_dssp EEEEES
T ss_pred EEEEee
Confidence 877743
No 48
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.61 E-value=1.2e-14 Score=137.45 Aligned_cols=88 Identities=19% Similarity=0.319 Sum_probs=80.0
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----EEEeeecc-CCCCCeeeeEEEEEeeCC---ceEEEEEEEEec
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK-----IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEE 557 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~-----~~~~T~~~-~t~nP~wne~f~f~v~~~---~~~L~i~V~d~~ 557 (680)
.+.|.|+|++|++|+..+..+.+||||+++++. ..++|+++ ++.||.|||+|.|.+... ...|.|+|||++
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 115 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYD 115 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECC
Confidence 348999999999999999889999999999953 78999999 999999999999998752 569999999999
Q ss_pred CC-CCceeEEEEEEcccc
Q 005736 558 IF-GDENMGSARVNLEGL 574 (680)
Q Consensus 558 ~~-~d~~iG~~~i~L~~l 574 (680)
.. ++++||++.++|.++
T Consensus 116 ~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 116 IGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp SSSCCEEEEEEEEETTCC
T ss_pred CCCCCcEEEeEEEecccC
Confidence 88 899999999999975
No 49
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.61 E-value=2.1e-15 Score=140.44 Aligned_cols=95 Identities=19% Similarity=0.230 Sum_probs=81.3
Q ss_pred ccCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEc---ceeeeecc-CCCCCCccce
Q 005736 290 KKAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE---ELTRRTDA-RPGSDPRWDS 365 (680)
Q Consensus 290 ~~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~---~~~~~T~v-~~t~nP~Wne 365 (680)
+.+..|.|.|+|++|++|++.|..|.+ ||||++.+. ...++|++ ++++||+|||
T Consensus 37 y~~~~~~L~V~v~~a~~L~~~d~~g~~----------------------dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne 94 (152)
T 1rsy_A 37 YDFQNNQLLVGIIQAAELPALDMGGTS----------------------DPYVKVFLLPDKKKKFETKVHRKTLNPVFNE 94 (152)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCC----------------------CEEEEEEEETTCCSCEECCCCTTCSSCEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCccCCCCc----------------------CeEEEEEEEcCCCceEeccccCCCCCCcCcc
Confidence 334569999999999999999876643 999999994 56788998 7899999999
Q ss_pred eEEEEEecC---CCeEEEEEEEeCCCCCCCceeEEEEEecccccC
Q 005736 366 MFNMVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVAD 407 (680)
Q Consensus 366 ~f~~~v~~~---~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~ 407 (680)
+|.|.+... ...|.|+|||+|.. .+|++||++.++|.++..
T Consensus 95 ~f~f~v~~~~l~~~~L~i~V~d~d~~-~~~~~iG~~~i~l~~l~~ 138 (152)
T 1rsy_A 95 QFTFKVPYSELGGKTLVMAVYDFDRF-SKHDIIGEFKVPMNTVDF 138 (152)
T ss_dssp EEEECCCHHHHTTCEEEEEEEECCSS-SCCEEEEEEEEEGGGCCC
T ss_pred cEEEeecHHHcCCCEEEEEEEECCCC-CCCcEEEEEEEEchhccC
Confidence 999988642 57899999999986 589999999999999853
No 50
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.61 E-value=1.1e-15 Score=142.01 Aligned_cols=108 Identities=18% Similarity=0.312 Sum_probs=90.6
Q ss_pred CeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEc-----ceeeeecc-CCCCCCccceeE
Q 005736 294 GGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE-----ELTRRTDA-RPGSDPRWDSMF 367 (680)
Q Consensus 294 ~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~-----~~~~~T~v-~~t~nP~Wne~f 367 (680)
.|.|.|+|++|++|++.|..|.+ ||||++.+. ...++|++ ++++||+|||+|
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~----------------------dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f 87 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLS----------------------DPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETF 87 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCC----------------------CEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCc----------------------CeEEEEEEECCCCCcceEecceeCCCCCCcCCcEE
Confidence 48999999999999999876643 999999997 46788998 789999999999
Q ss_pred EEEEecC--CCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCCCcee
Q 005736 368 NMVLHEE--TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGVNSG 445 (680)
Q Consensus 368 ~~~v~~~--~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~G 445 (680)
.|.+... ...|.|+|||+|.. .+|++||++.++|.++... ..+.|++|...+.|
T Consensus 88 ~f~v~~~~~~~~L~i~V~d~d~~-~~~~~iG~~~i~l~~l~~~-----------------------~~~~W~~L~~~~~g 143 (149)
T 1a25_A 88 RFQLKESDKDRRLSVEIWDWDLT-SRNDFMGSLSFGISELQKA-----------------------GVDGWFKLLSQEEG 143 (149)
T ss_dssp EEECCSGGGGCEEEEEEEECCSS-SCCEEEEEEEEEHHHHTTC-----------------------CEEEEEECBCHHHH
T ss_pred EEEeccccCCCEEEEEEEECCCC-CCCCEEEEEEEEHHHhCcC-----------------------ccCCeEEccCCCCC
Confidence 9998764 45799999999986 5899999999999998632 24678888776656
Q ss_pred eE
Q 005736 446 EL 447 (680)
Q Consensus 446 ~l 447 (680)
++
T Consensus 144 ~~ 145 (149)
T 1a25_A 144 EY 145 (149)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 51
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=5.3e-15 Score=135.88 Aligned_cols=95 Identities=16% Similarity=0.236 Sum_probs=80.5
Q ss_pred ccCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEc---ceeeeecc-CCCCCCccce
Q 005736 290 KKAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE---ELTRRTDA-RPGSDPRWDS 365 (680)
Q Consensus 290 ~~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~---~~~~~T~v-~~t~nP~Wne 365 (680)
+....+.|+|+|++|++|++.|..|.+ ||||++.+. .+.++|++ ++++||+|||
T Consensus 21 y~~~~~~L~v~v~~a~~L~~~d~~g~~----------------------dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne 78 (141)
T 2d8k_A 21 YNFQESTLTVKIMKAQELPAKDFSGTS----------------------DPFVKIYLLPDKKHKLETKVKRKNLNPHWNE 78 (141)
T ss_dssp ECSSSCCEEEEEEEEESCCCCSSSSCC----------------------CEEEEEEEESCCSSEEECCCCTTCSSCCCCE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCCCC----------------------CcEEEEEEECCCCccEeCceEcCCCCCcccc
Confidence 334569999999999999999876653 999999994 46788998 7999999999
Q ss_pred eEEEEEec----CCCeEEEEEEEeCCCCCCCceeEEEEEecccccC
Q 005736 366 MFNMVLHE----ETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVAD 407 (680)
Q Consensus 366 ~f~~~v~~----~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~ 407 (680)
+|.|.+.. ....|.|+|||+|.. .+|++||++.++|.++..
T Consensus 79 ~f~f~~~~~~~~~~~~l~i~V~d~d~~-~~~~~iG~~~i~l~~l~~ 123 (141)
T 2d8k_A 79 TFLFEGFPYEKVVQRILYLQVLDYDRF-SRNDPIGEVSIPLNKVDL 123 (141)
T ss_dssp EEEECSCCHHHHTTSEEEEEEEECCSS-SSCEEEEEEEEETTTSCT
T ss_pred EEEECccCHHHcccCEEEEEEEECCCC-CCCcEEEEEEEEhhhhcC
Confidence 99998532 256899999999986 589999999999999864
No 52
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.59 E-value=3e-15 Score=137.92 Aligned_cols=94 Identities=19% Similarity=0.254 Sum_probs=81.0
Q ss_pred cCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEE---cceeeeecc-CCCCCCcccee
Q 005736 291 KAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIEL---EELTRRTDA-RPGSDPRWDSM 366 (680)
Q Consensus 291 ~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~---~~~~~~T~v-~~t~nP~Wne~ 366 (680)
....|.|.|+|++|++|+..|..+.+ ||||++.+ +...++|++ +++.||+|||+
T Consensus 30 ~~~~~~L~v~v~~a~~L~~~d~~g~~----------------------dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~ 87 (143)
T 3f04_A 30 DFQNNQLLVGIIQAAELPALDMGGTS----------------------DPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQ 87 (143)
T ss_dssp ETTTTEEEEEEEEEECCCCBGGGBCC----------------------CEEEEEEEESCCSCCEECCCCCSCSSCEEEEE
T ss_pred eCCCCEEEEEEEEecCCCCCCCCCCc----------------------CcEEEEEEECCCCccEECccCcCCCCCcCcCe
Confidence 34569999999999999998866543 99999999 456889998 78999999999
Q ss_pred EEEEEecC---CCeEEEEEEEeCCCCCCCceeEEEEEecccccC
Q 005736 367 FNMVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVAD 407 (680)
Q Consensus 367 f~~~v~~~---~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~ 407 (680)
|.|.+... ...|.|+|||+|.. .+|++||++.++|.++..
T Consensus 88 f~f~v~~~~l~~~~L~i~V~d~d~~-~~~~~iG~~~i~l~~l~~ 130 (143)
T 3f04_A 88 FTFKVPYSELGGKTLVMAVYDFDRF-SKHDIIGEFKVPMNTVDF 130 (143)
T ss_dssp EEECCCHHHHTTCEEEEEEEECCSS-SCCEEEEEEEEEGGGCCT
T ss_pred EEEeecHhhcCCCEEEEEEEeCCCC-CCCceEEEEEEEHHHccC
Confidence 99998743 46899999999986 589999999999999864
No 53
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.59 E-value=4.1e-15 Score=138.72 Aligned_cols=113 Identities=13% Similarity=0.208 Sum_probs=89.2
Q ss_pred cccCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEc-----ceeeeecc-CCCCCCc
Q 005736 289 RKKAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE-----ELTRRTDA-RPGSDPR 362 (680)
Q Consensus 289 ~~~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~-----~~~~~T~v-~~t~nP~ 362 (680)
.+....|.|.|+|++|++|++.| .|. +||||++.+. ...++|++ ++++||+
T Consensus 21 ~y~~~~~~L~V~v~~a~~L~~~d-~g~----------------------~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~ 77 (153)
T 3fbk_A 21 SIDAQDRVLLLHIIEGKGLISKQ-PGT----------------------CDPYVKISLIPEDSRLRHQKTQTVPDCRDPA 77 (153)
T ss_dssp EEEESSSEEEEEEEEEESCCCCS-SSC----------------------CCEEEEEEEESCSCCTTCEECCCCTTCSSCE
T ss_pred EEECCCCEEEEEEEEeeCCCCCC-CCC----------------------CCEEEEEEEEcCCCCccEEeccccCCCCCCc
Confidence 34455699999999999999988 454 3999999993 35688988 7999999
Q ss_pred cceeEEEEEe--cCCCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccC
Q 005736 363 WDSMFNMVLH--EETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFE 440 (680)
Q Consensus 363 Wne~f~~~v~--~~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 440 (680)
|||+|.|.+. +....|.|+|||+|..+.+|++||++.++|.++... +.....|++|.
T Consensus 78 wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~---------------------~~~~~~W~~L~ 136 (153)
T 3fbk_A 78 FHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTP---------------------DKEISGWYYLL 136 (153)
T ss_dssp EEEEEEEECCGGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC-----------------------CCEEEEEECB
T ss_pred cccEEEEecccHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCC---------------------CCccccEEECC
Confidence 9999999984 445679999999998632399999999999998631 12456788887
Q ss_pred CCcee
Q 005736 441 GVNSG 445 (680)
Q Consensus 441 ~~~~G 445 (680)
+...|
T Consensus 137 ~~~~g 141 (153)
T 3fbk_A 137 GEHLG 141 (153)
T ss_dssp CTTGG
T ss_pred Chhhc
Confidence 65544
No 54
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.59 E-value=2.5e-15 Score=137.27 Aligned_cols=107 Identities=17% Similarity=0.286 Sum_probs=89.6
Q ss_pred CeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEE-----cceeeeecc-CCCCCCccceeE
Q 005736 294 GGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIEL-----EELTRRTDA-RPGSDPRWDSMF 367 (680)
Q Consensus 294 ~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~-----~~~~~~T~v-~~t~nP~Wne~f 367 (680)
.|.|.|+|++|++|++.|..|.+ ||||++.+ +...++|++ +++.||.|||+|
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~----------------------dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f 72 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLS----------------------DPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESF 72 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCC----------------------CEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCC----------------------CeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEE
Confidence 49999999999999999876653 99999999 466789998 789999999999
Q ss_pred EEEEecC--CCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCCCcee
Q 005736 368 NMVLHEE--TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGVNSG 445 (680)
Q Consensus 368 ~~~v~~~--~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~G 445 (680)
.|.+... ...|.|+|||+|.. ++|++||++.++|.++... ..+.|++|.+...|
T Consensus 73 ~f~~~~~~~~~~l~i~v~d~d~~-~~~~~iG~~~i~l~~l~~~-----------------------~~~~W~~L~~~~~g 128 (137)
T 3rdl_A 73 TFKLKPSDKDRRLSVEIWDWDRT-TRNDFMGSLSFGVSELMKM-----------------------PASGWYKLLNQEEG 128 (137)
T ss_dssp EEECCGGGGGCEEEEEEEECCSS-SCCEEEEEEEEEHHHHHHS-----------------------CEEEEEECBCHHHH
T ss_pred EEEcCchhcCCEEEEEEEECCCC-CCCceEEEEEEeHHHhccC-----------------------ccCceEECcCcccc
Confidence 9998753 35799999999986 5899999999999998532 24678888776555
Q ss_pred e
Q 005736 446 E 446 (680)
Q Consensus 446 ~ 446 (680)
+
T Consensus 129 ~ 129 (137)
T 3rdl_A 129 E 129 (137)
T ss_dssp T
T ss_pred c
Confidence 4
No 55
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.59 E-value=2.5e-15 Score=140.21 Aligned_cols=94 Identities=12% Similarity=0.101 Sum_probs=81.4
Q ss_pred ccCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc------eeeeecc-CCCCCCc
Q 005736 290 KKAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE------LTRRTDA-RPGSDPR 362 (680)
Q Consensus 290 ~~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~------~~~~T~v-~~t~nP~ 362 (680)
+....|.|+|+|++|++|+++|..|.+ ||||++.+.. ..++|++ ++|+||+
T Consensus 38 y~~~~~~L~V~Vi~a~~L~~~d~~g~s----------------------DPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~ 95 (155)
T 2z0u_A 38 YDEKNKQFAILIIQLSNLSALLQQQDQ----------------------KVNIRVAVLPCSESTTCLFRTRPLDASDTLV 95 (155)
T ss_dssp EETTTTEEEEEEEEEECGGGTCCSCCS----------------------EEEEEEEEESCSCHHHHEEECCCEECCSSEE
T ss_pred EcCCCCEEEEEEEEccCcCCcccCCCC----------------------CEEEEEEEecCCCCCccceeCCcCCCCCCCc
Confidence 334569999999999999999976654 9999999964 2689998 7999999
Q ss_pred cceeEEEEEecC---CCeEEEEEEEeCCCCCCCceeEEEEEeccccc
Q 005736 363 WDSMFNMVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVA 406 (680)
Q Consensus 363 Wne~f~~~v~~~---~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~ 406 (680)
|||+|.|.+... ...|.|+|||+|.. ++|++||++.++|.++.
T Consensus 96 wnE~F~f~v~~~~l~~~~L~~~V~d~d~~-~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 96 FNEVFWVSMSYPALHQKTLRVDVCTTDRS-HLEECLGGAQISLAEVC 141 (155)
T ss_dssp EEEEEEEECCHHHHHHCEEEEEEEEECTT-SCEEEEEEEEEECTTSC
T ss_pred cccEEEEEcCHHHhCcCEEEEEEEECCCC-CCCcEEEEEEEEHHHcc
Confidence 999999998753 46799999999987 69999999999999985
No 56
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.58 E-value=2.4e-14 Score=133.48 Aligned_cols=86 Identities=26% Similarity=0.356 Sum_probs=72.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCE---EEeeecc-CCCCCeeeeEEEEEeeCC---ceEEEEEEEEecC
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY--GKI---VQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEI 558 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l--~~~---~~~T~~~-~t~nP~wne~f~f~v~~~---~~~L~i~V~d~~~ 558 (680)
+.|.|+|++|+||+..+..+.+||||++++ ++. .++|+++ ++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 30 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~ 109 (153)
T 1w15_A 30 NTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER 109 (153)
T ss_dssp TEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT
T ss_pred CEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCC
Confidence 589999999999999988899999999999 443 7799999 999999999999998764 4789999999998
Q ss_pred C-CCceeEEEEEEccc
Q 005736 559 F-GDENMGSARVNLEG 573 (680)
Q Consensus 559 ~-~d~~iG~~~i~L~~ 573 (680)
. ++++||++.++|.+
T Consensus 110 ~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 110 GSRNEVIGRLVLGATA 125 (153)
T ss_dssp TSCCEEEEEEEESTTC
T ss_pred CCCCcEEEEEEECCCC
Confidence 8 89999999999988
No 57
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.58 E-value=4.6e-15 Score=136.21 Aligned_cols=93 Identities=17% Similarity=0.346 Sum_probs=79.0
Q ss_pred cCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEE-----cceeeeecc-CCCCCCccc
Q 005736 291 KAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIEL-----EELTRRTDA-RPGSDPRWD 364 (680)
Q Consensus 291 ~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~-----~~~~~~T~v-~~t~nP~Wn 364 (680)
....|.|.|+|++|++|++.|..|.+ ||||++.+ +...++|++ ++++||+||
T Consensus 17 ~~~~~~L~v~v~~a~~L~~~d~~g~~----------------------dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wn 74 (141)
T 1v27_A 17 DKVGHQLIVTILGAKDLPSREDGRPR----------------------NPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWN 74 (141)
T ss_dssp ETTTTEEEEEEEEEESCCCCSSSCCC----------------------CEEEECCCSSCCSSSSCCBCCCCSSCSSCCCC
T ss_pred eCCCCEEEEEEEEccCCCCcCCCCCC----------------------CCEEEEEEecCCCCCcceeCccccCCCCCccc
Confidence 34459999999999999999876653 99999998 356789998 789999999
Q ss_pred eeEEEEE-ec---CCCeEEEEEEEeCCCCCC--CceeEEEEEeccccc
Q 005736 365 SMFNMVL-HE---ETGTVRFNLYECIPGHVK--YDYLTSCEVKMKYVA 406 (680)
Q Consensus 365 e~f~~~v-~~---~~~~l~l~v~d~d~~~~~--d~~lG~~~i~l~~l~ 406 (680)
|+|.|.+ .. ....|.|+|||+|.. .+ |++||++.++|.++.
T Consensus 75 e~f~f~~~~~~~~~~~~l~i~V~d~d~~-~~~~~~~lG~~~i~l~~l~ 121 (141)
T 1v27_A 75 QTFIYSPVHRREFRERMLEITLWDQARV-REEESEFLGEILIELETAL 121 (141)
T ss_dssp CCCEECSCCTTGGGTCEEEEEEEEBCSS-SSCCBCCCEEEEEEGGGCC
T ss_pred cEEEEccCCHHHhcCCEEEEEEEECCCC-cCCCCceEEEEEEEccccC
Confidence 9999984 32 246899999999986 45 999999999999985
No 58
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.58 E-value=6e-15 Score=133.25 Aligned_cols=94 Identities=16% Similarity=0.300 Sum_probs=76.2
Q ss_pred cCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEE-----cceeeeecc-CCCCCCccc
Q 005736 291 KAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIEL-----EELTRRTDA-RPGSDPRWD 364 (680)
Q Consensus 291 ~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~-----~~~~~~T~v-~~t~nP~Wn 364 (680)
.+..|.|.|+|++|++|++.|..|.+ ||||++.+ +...++|++ ++++||+||
T Consensus 14 ~~~~~~L~v~v~~a~~L~~~d~~~~~----------------------dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wn 71 (129)
T 2bwq_A 14 DKVGHQLIVTILGAKDLPSREDGRPR----------------------NPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWN 71 (129)
T ss_dssp ETTTTEEEEEEEEEESCCCCTTSCCB----------------------CEEEEEEEESSCSGGGEEECCCCSSBSSCEEE
T ss_pred ccCCCEEEEEEEEeeCCCCCCCCCCC----------------------CCEEEEEEecCCCCCcceecccccCCCCCccc
Confidence 34459999999999999999876653 99999999 467889998 799999999
Q ss_pred eeEEEEEec----CCCeEEEEEEEeCCCCCC--CceeEEEEEecccccC
Q 005736 365 SMFNMVLHE----ETGTVRFNLYECIPGHVK--YDYLTSCEVKMKYVAD 407 (680)
Q Consensus 365 e~f~~~v~~----~~~~l~l~v~d~d~~~~~--d~~lG~~~i~l~~l~~ 407 (680)
|+|.|.+.. ....|.|+|||+|.. ++ |++||++.++|.++..
T Consensus 72 e~f~f~~~~~~~~~~~~l~~~V~d~d~~-~~~~~~~lG~~~i~l~~l~~ 119 (129)
T 2bwq_A 72 QTFIYSPVHRREFRERMLEITLWDQARV-REEESEFLGEILIELETALL 119 (129)
T ss_dssp EEEEECSCCGGGGGGCEEEEEEEEC--------CEEEEEEEEEGGGCCC
T ss_pred cEEEEccCCHHHhcCCeEEEEEEECCcC-cCcCCceeEEEEEEccccCC
Confidence 999999532 246899999999986 45 9999999999999863
No 59
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.57 E-value=8.3e-15 Score=134.74 Aligned_cols=94 Identities=17% Similarity=0.270 Sum_probs=80.5
Q ss_pred CcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc-----eeeeecc-CCCCCCccce
Q 005736 292 AVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE-----LTRRTDA-RPGSDPRWDS 365 (680)
Q Consensus 292 ~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~-----~~~~T~v-~~t~nP~Wne 365 (680)
...|.|.|+|++|++|++.+..|.+ ||||++.++. ..++|++ ++++||+|||
T Consensus 26 ~~~~~L~V~v~~a~~L~~~d~~g~~----------------------dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne 83 (142)
T 2chd_A 26 QDNSNLQCTIIRAKGLKPMDSNGLA----------------------DPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNE 83 (142)
T ss_dssp GGGTEEEEEEEEEESCCCCCTTSCC----------------------CEEEEEEEESCCSGGGEEECCCCCSCSSCEEEE
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCC----------------------CCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcC
Confidence 4459999999999999999876643 9999999974 6889998 7899999999
Q ss_pred eEEEE-EecC---CCeEEEEEEEeCCCCCCCceeEEEEEecccccCC
Q 005736 366 MFNMV-LHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADD 408 (680)
Q Consensus 366 ~f~~~-v~~~---~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~ 408 (680)
+|.|. +... ...|.|+|||+|.. ++|++||++.++|.++..+
T Consensus 84 ~f~f~~~~~~~~~~~~l~i~V~d~d~~-~~d~~iG~~~i~l~~l~~~ 129 (142)
T 2chd_A 84 TLQYHGITEEDMQRKTLRISVCDEDKF-GHNEFIGETRFSLKKLKAN 129 (142)
T ss_dssp EEEEESCCHHHHHHCEEEEEEEEECTT-SCEEEEEEEEEEGGGCCTT
T ss_pred EEEEcccCHHHccCCEEEEEEEECCCC-CCCcEEEEEEEEHHHcCCC
Confidence 99998 5532 36899999999986 5899999999999998643
No 60
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.57 E-value=7e-15 Score=134.41 Aligned_cols=113 Identities=13% Similarity=0.177 Sum_probs=89.4
Q ss_pred CcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc-----eeeeecc-CCCCCCccce
Q 005736 292 AVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE-----LTRRTDA-RPGSDPRWDS 365 (680)
Q Consensus 292 ~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~-----~~~~T~v-~~t~nP~Wne 365 (680)
+..|.|.|+|++|++|+..|..|.+ ||||++.++. ..++|++ +++.||+|||
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~~g~~----------------------dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne 70 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAMDIGGTS----------------------DPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNE 70 (138)
T ss_dssp TTTTEEEEEEEEEESCCCCBTTTBC----------------------CEEEEEEEEETTEEEEEEECCCCSSCSSCEEEE
T ss_pred CCCCeEEEEEEEeeCCCCcCCCCCc----------------------CeEEEEEEEeCCCccceEeCccccCCCCCcCcc
Confidence 4459999999999999999876543 9999999973 4778888 7899999999
Q ss_pred eEEEEEecCC---CeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhh---ccCceeeeeecc
Q 005736 366 MFNMVLHEET---GTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAE---FCGDEVEMTVPF 439 (680)
Q Consensus 366 ~f~~~v~~~~---~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~l 439 (680)
+|.|.+.... ..|.|+|||+|.. .+|++||++.+++.++... ...|++ ..++...+|++|
T Consensus 71 ~f~f~v~~~~l~~~~l~~~V~d~~~~-~~~~~lG~~~i~l~~~~~~-------------~~~W~~l~~~~~~~~~~Wh~L 136 (138)
T 3n5a_A 71 SFAFDIPTEKLRETTIIITVMDKDKL-SRNDVIGKIYLSWKSGPGE-------------VKHWKDMIARPRQPVAQWHQL 136 (138)
T ss_dssp EEEEECCGGGGGGEEEEEEEEECCSS-SCCEEEEEEEESSSSCHHH-------------HHHHHHHHHSTTCCEEEEEEC
T ss_pred eEEEECChhhcCceEEEEEEEECCCC-CCCcEEEEEEEccccCChH-------------HHHHHHHHhCCCCeEEEEeec
Confidence 9999987643 5799999999986 5899999999999875321 222332 235567788876
Q ss_pred C
Q 005736 440 E 440 (680)
Q Consensus 440 ~ 440 (680)
.
T Consensus 137 ~ 137 (138)
T 3n5a_A 137 K 137 (138)
T ss_dssp B
T ss_pred C
Confidence 4
No 61
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.56 E-value=1.4e-14 Score=132.49 Aligned_cols=94 Identities=12% Similarity=0.138 Sum_probs=79.8
Q ss_pred CcCeEEEEEEEecCCCCCCCCC-CCCcccccccCCCCccccccCCCCCCeEEEEEEc---ceeeeecc-CCCCCCcccee
Q 005736 292 AVGGIVYVRVISASKLSRSSLR-GSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE---ELTRRTDA-RPGSDPRWDSM 366 (680)
Q Consensus 292 ~~~G~L~V~v~~a~~L~~~d~~-g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~---~~~~~T~v-~~t~nP~Wne~ 366 (680)
...|.|.|+|++|++|++.|.. |. +||||++.+. .+.++|++ ++++||+|||+
T Consensus 19 ~~~~~L~v~v~~a~~L~~~d~~~~~----------------------~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~ 76 (138)
T 1ugk_A 19 FERKAFVVNIKEARGLPAMDEQSMT----------------------SDPYIKMTILPEKKHKVKTRVLRKTLDPAFDET 76 (138)
T ss_dssp GGGTEEEEEEEEEESCCCCBTTTTB----------------------CEEEEEEEEETTTCSEEECCCCSSCSSCEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCC----------------------CCCEEEEEEecCCCceEecCcCcCCCCCcEeeE
Confidence 4459999999999999999864 43 3999999996 36889998 79999999999
Q ss_pred EEEE-EecC---CCeEEEEEEEeCCCCCCCceeEEEEEecccccCC
Q 005736 367 FNMV-LHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADD 408 (680)
Q Consensus 367 f~~~-v~~~---~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~ 408 (680)
|.|. +... ...|.|+|||+|.. .+|++||++.++|.++...
T Consensus 77 f~f~~v~~~~~~~~~l~i~V~d~d~~-~~~~~lG~~~i~l~~l~~~ 121 (138)
T 1ugk_A 77 FTFYGIPYTQIQELALHFTILSFDRF-SRDDIIGEVLIPLSGIELS 121 (138)
T ss_dssp EEEECCCSTTGGGCEEEEEEEEECSS-CCCCCCEEEEEECTTCCCT
T ss_pred EEEcCcCHHHhccCEEEEEEEECCCC-CCCcEEEEEEEehhHccCC
Confidence 9995 6542 35899999999986 5899999999999999643
No 62
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.56 E-value=4.8e-15 Score=137.41 Aligned_cols=94 Identities=17% Similarity=0.233 Sum_probs=79.5
Q ss_pred ccCcCeEEEEEEEecCCCCCCC-CCCCCcccccccCCCCccccccCCCCCCeEEEEEEc-----ceeeeecc-CCCCCCc
Q 005736 290 KKAVGGIVYVRVISASKLSRSS-LRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE-----ELTRRTDA-RPGSDPR 362 (680)
Q Consensus 290 ~~~~~G~L~V~v~~a~~L~~~d-~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~-----~~~~~T~v-~~t~nP~ 362 (680)
+....|.|.|+|++|++|++.| ..|. +||||++.+. ...++|++ ++++||+
T Consensus 18 y~~~~~~L~V~v~~a~~L~~~d~~~~~----------------------~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~ 75 (148)
T 3fdw_A 18 YEQQTQSLVVHVKECHQLAYADEAKKR----------------------SNPYVKTYLLPDKSRQGKRKTSIKRDTVNPL 75 (148)
T ss_dssp EETTTTEEEEEEEEEESCCCSBTTTTB----------------------CCEEEEEEEETCCSGGGEEECCCCSSCSSCE
T ss_pred EeCCCCEEEEEEEEecCCCCcccCCCC----------------------CCeEEEEEEEcCCcccCccccccCCCCCCCc
Confidence 3345699999999999999887 3443 3999999997 34778988 7899999
Q ss_pred cceeEEEEEecC---CCeEEEEEEEeCCCCCCCceeEEEEEeccccc
Q 005736 363 WDSMFNMVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVA 406 (680)
Q Consensus 363 Wne~f~~~v~~~---~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~ 406 (680)
|||+|.|.+... ...|.|+|||+|.. ++|++||++.++|.++.
T Consensus 76 wne~f~f~v~~~~~~~~~L~~~V~d~d~~-~~~~~iG~~~i~l~~l~ 121 (148)
T 3fdw_A 76 YDETLRYEIPESLLAQRTLQFSVWHHGRF-GRNTFLGEAEIQMDSWK 121 (148)
T ss_dssp EEEEEEEECCSTTGGGCEEEEEEEEECGG-GCEEEEEEEEEEHHHHH
T ss_pred EeeEEEEEeChhHhCceEEEEEEEECCCC-cCCcEEEEEEEEccccc
Confidence 999999998764 34699999999986 58999999999999985
No 63
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.56 E-value=1.2e-14 Score=137.43 Aligned_cols=118 Identities=14% Similarity=0.264 Sum_probs=92.1
Q ss_pred cccCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc-----eeeeecc-CCCCCCc
Q 005736 289 RKKAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE-----LTRRTDA-RPGSDPR 362 (680)
Q Consensus 289 ~~~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~-----~~~~T~v-~~t~nP~ 362 (680)
.+.+..|.|.|+|++|++|++.|..|.+ ||||++.++. ..++|++ ++++||+
T Consensus 31 ~y~~~~~~L~V~v~~a~~L~~~d~~g~~----------------------DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~ 88 (166)
T 2cm5_A 31 MYSTQQGGLIVGIIRCVHLAAMDANGYS----------------------DPFVKLWLKPDMGKKAKHKTQIKKKTLNPE 88 (166)
T ss_dssp EEETTTTEEEEEEEEEESCCCCSTTSCC----------------------CEEEEEEEETC---CCEEECCCCCSCSSCE
T ss_pred EEECCCCEEEEEEEEeECCCCccCCCCC----------------------CcEEEEEEECCCCccceEeCCcccCCCCCc
Confidence 3334569999999999999999876653 9999999975 6789998 7999999
Q ss_pred cceeEEEEEecC---CCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhh---ccCceeeee
Q 005736 363 WDSMFNMVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAE---FCGDEVEMT 436 (680)
Q Consensus 363 Wne~f~~~v~~~---~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~ 436 (680)
|||+|.|.+... ...|.|+|||+|.. ++|++||++.+++.++... ...|+. ..++....|
T Consensus 89 wne~f~f~v~~~~l~~~~L~i~V~d~d~~-~~~~~iG~~~i~l~~~~~~-------------~~~W~~l~~~~~~~~~~W 154 (166)
T 2cm5_A 89 FNEEFFYDIKHSDLAKKSLDISVWDYDIG-KSNDYIGGCQLGISAKGER-------------LKHWYECLKNKDKKIERW 154 (166)
T ss_dssp EEEEEEEECCGGGGGGCEEEEEEEECCSS-SCCEEEEEEEEETTCCHHH-------------HHHHHHHHHCTTCCEEEE
T ss_pred ccceEEEEcchHhcCCCEEEEEEEECCCC-CCCcEEEeEEEecccCCch-------------hHHHHHHHhCCCCcceEe
Confidence 999999998753 45899999999986 5899999999999876321 222332 235567778
Q ss_pred eccCCC
Q 005736 437 VPFEGV 442 (680)
Q Consensus 437 ~~l~~~ 442 (680)
++|...
T Consensus 155 h~L~~~ 160 (166)
T 2cm5_A 155 HQLQNE 160 (166)
T ss_dssp EECBC-
T ss_pred eECCCc
Confidence 877654
No 64
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.56 E-value=8.9e-15 Score=139.05 Aligned_cols=91 Identities=14% Similarity=0.192 Sum_probs=78.4
Q ss_pred CeEEEEEEEecCCCCCCCC-CCCCcccccccCCCCccccccCCCCCCeEEEEEEcc-----eeeeecc-CCCCCCcccee
Q 005736 294 GGIVYVRVISASKLSRSSL-RGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE-----LTRRTDA-RPGSDPRWDSM 366 (680)
Q Consensus 294 ~G~L~V~v~~a~~L~~~d~-~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~-----~~~~T~v-~~t~nP~Wne~ 366 (680)
.|.|.|+|++|++|+++|. .|. +||||++.+.. ..++|++ ++++||+|||+
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~----------------------~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~ 86 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKST----------------------PAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQS 86 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CC----------------------CEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCcCCCC----------------------CCceEEEEEECCCccccceeCccCCCCCCCCCCcE
Confidence 5999999999999999885 454 39999999863 3778998 78999999999
Q ss_pred EEEEEecCCCeEEEEEE-EeCCCCCCCceeEEEEEecccccC
Q 005736 367 FNMVLHEETGTVRFNLY-ECIPGHVKYDYLTSCEVKMKYVAD 407 (680)
Q Consensus 367 f~~~v~~~~~~l~l~v~-d~d~~~~~d~~lG~~~i~l~~l~~ 407 (680)
|.|.+......|.|+|| |+|.. .+|++||++.++|.++..
T Consensus 87 f~f~v~~~~~~L~~~V~~d~d~~-~~d~~iG~~~i~l~~l~~ 127 (171)
T 2q3x_A 87 LVFDESPQGKVLQVIVWGDYGRM-DHKCFMGVAQILLEELDL 127 (171)
T ss_dssp EECSSCCTTEEEEEEEEEECSTT-CSSEEEEEEEECGGGSCT
T ss_pred EEEEecCCCCEEEEEEEEcCCCC-CCCCEEEEEEEEHHHccc
Confidence 99998766678999999 99986 589999999999999863
No 65
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.55 E-value=3.7e-15 Score=137.06 Aligned_cols=90 Identities=17% Similarity=0.269 Sum_probs=77.4
Q ss_pred CeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcce--------------eeeecc-CCC
Q 005736 294 GGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEEL--------------TRRTDA-RPG 358 (680)
Q Consensus 294 ~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~--------------~~~T~v-~~t 358 (680)
.|.|.|+|++|++|+++|..|.+ ||||++.++.. .++|++ +++
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~----------------------Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t 74 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYS----------------------DPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKS 74 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCS----------------------CCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHH
T ss_pred CCEEEEEEEEecCCCCCCCCCCC----------------------CceEEEEEecCCCcccccccccccceeeccccCCC
Confidence 48999999999999999876653 99999999853 478887 689
Q ss_pred CCCccceeEEEE-Eec---CCCeEEEEEEEeCCCCCCCceeEEEEEeccccc
Q 005736 359 SDPRWDSMFNMV-LHE---ETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVA 406 (680)
Q Consensus 359 ~nP~Wne~f~~~-v~~---~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~ 406 (680)
+||+|||+|.|. +.. ....|.|+|||+|.. ++|++||++.++|.++.
T Consensus 75 ~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~-~~~~~lG~~~i~l~~l~ 125 (142)
T 1rh8_A 75 LNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRF-SSNDFLGEVLIDLSSTS 125 (142)
T ss_dssp HSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSS-SCEEEEEEEEEETTSCG
T ss_pred CCCCCCCEEEECCcCHHHccCCEEEEEEEECCCC-CCCceEEEEEEeccccc
Confidence 999999999996 543 356899999999986 58999999999999885
No 66
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.54 E-value=1.5e-14 Score=135.72 Aligned_cols=119 Identities=13% Similarity=0.163 Sum_probs=92.1
Q ss_pred ccCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc-----eeeeecc-CCCCCCcc
Q 005736 290 KKAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE-----LTRRTDA-RPGSDPRW 363 (680)
Q Consensus 290 ~~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~-----~~~~T~v-~~t~nP~W 363 (680)
+.+..|.|.|+|++|++|++.|..|.+ ||||++.++. ..++|++ ++++||+|
T Consensus 20 y~~~~~~L~V~v~~a~~L~~~d~~g~~----------------------dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~w 77 (159)
T 1tjx_A 20 YVPTAGKLTVVILEAKNLKKMDVGGLS----------------------DPYVKIHLMQNGKRLKKKKTTIKKNTLNPYY 77 (159)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCC----------------------CEEEEEEEEETTEEEEEEECCCCCSCSSCEE
T ss_pred EcCCCCEEEEEEEEeeCCCCccCCCCC----------------------CeEEEEEEEeCCceeceeeCceecCCCCCcc
Confidence 334569999999999999999876653 9999999962 4678888 78999999
Q ss_pred ceeEEEEEecC---CCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhh---ccCceeeeee
Q 005736 364 DSMFNMVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAE---FCGDEVEMTV 437 (680)
Q Consensus 364 ne~f~~~v~~~---~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~ 437 (680)
||+|.|.+... ...|.|+|||+|.. ++|++||++.+++..+... ...|.+ ..+.....|+
T Consensus 78 ne~f~f~v~~~~l~~~~l~i~V~d~d~~-~~~~~iG~~~i~l~~~~~~-------------~~~w~~l~~~~~~~~~~W~ 143 (159)
T 1tjx_A 78 NESFSFEVPFEQIQKVQVVVTVLDYDKI-GKNDAIGKVFVGYNSTGAE-------------LRHWSDMLANPRRPIAQWH 143 (159)
T ss_dssp EEEEEEECCGGGGGGCEEEEEEEECCSS-SCCEEEEEEEEETTCCHHH-------------HHHHHHHHHSTTCCEEEEE
T ss_pred cceEEEEcCHHHhCCcEEEEEEEECCCC-CCCceEEEEEECCCCCCcH-------------HHHHHHHHHCCCCeeeeEE
Confidence 99999998753 35799999999986 5899999999999875211 112221 2345678899
Q ss_pred ccCCCce
Q 005736 438 PFEGVNS 444 (680)
Q Consensus 438 ~l~~~~~ 444 (680)
+|.....
T Consensus 144 ~L~~~~~ 150 (159)
T 1tjx_A 144 TLQVEEE 150 (159)
T ss_dssp ECBCHHH
T ss_pred ECcCccc
Confidence 9876543
No 67
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.54 E-value=3e-14 Score=130.38 Aligned_cols=91 Identities=15% Similarity=0.214 Sum_probs=75.3
Q ss_pred ccCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEc----ceeeeecc-CCCCCCccc
Q 005736 290 KKAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE----ELTRRTDA-RPGSDPRWD 364 (680)
Q Consensus 290 ~~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~----~~~~~T~v-~~t~nP~Wn 364 (680)
+....|.|.|+|++|++ +|..|. +||||++.+. ...++|++ ++++||+||
T Consensus 21 y~~~~~~L~V~v~~a~~---~d~~g~----------------------sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wn 75 (138)
T 1wfm_A 21 YDCQKAELFVTRLEAVT---SNHDGG----------------------CDCYVQGSVANRTGSVEAQTALKKRQLHTTWE 75 (138)
T ss_dssp EETTTTEEEEEEEEEEC---CCCSSC----------------------CCEEEEEEEEETTEEEEEECCCCCCCSSEECS
T ss_pred EeCCCCEEEEEEEEEEc---CCCCCC----------------------cceEEEEEEEcCCCcccEecccCcCCCCCcCC
Confidence 33446999999999993 555554 3999999994 23678998 799999999
Q ss_pred eeEEEEEecC---CCeEEEEEEEeCCCCCCCceeEEEEEeccccc
Q 005736 365 SMFNMVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVA 406 (680)
Q Consensus 365 e~f~~~v~~~---~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~ 406 (680)
|+|.|.+... ...|.|+|||+|.. .+|++||++.++|.++.
T Consensus 76 E~f~f~v~~~~l~~~~L~~~V~d~d~~-~~dd~lG~~~i~l~~l~ 119 (138)
T 1wfm_A 76 EGLVLPLAEEELPTATLTLTLRTCDRF-SRHSVAGELRLGLDGTS 119 (138)
T ss_dssp SCEEEECCTTSSTTCEEEEEEEECCSS-CTTSCSEEEEEESSSSS
T ss_pred ceEEEEecHHHcCCCEEEEEEEECCCC-CCCcEEEEEEEEccccc
Confidence 9999998753 35799999999986 68999999999999985
No 68
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.53 E-value=2.6e-14 Score=133.25 Aligned_cols=93 Identities=15% Similarity=0.255 Sum_probs=73.8
Q ss_pred cccCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEc--ce---eeeecc-CCCCCCc
Q 005736 289 RKKAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE--EL---TRRTDA-RPGSDPR 362 (680)
Q Consensus 289 ~~~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~--~~---~~~T~v-~~t~nP~ 362 (680)
.+....|.|.|+|++|++|++.|..|.+ ||||++.+. +. .++|++ ++++||+
T Consensus 24 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~----------------------dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~ 81 (153)
T 1w15_A 24 CYQSTTNTLTVVVLKARHLPKSDVSGLS----------------------DPYVKVNLYHAKKRISKKKTHVKKCTPNAV 81 (153)
T ss_dssp EEETTTTEEEEEEEEEESCC------CC----------------------CEEEEEEEEETTEEEEEEECCCCCSCSSEE
T ss_pred EEcCCCCEEEEEEEEeECCCCcCCCCCC----------------------CeEEEEEEEeCCeEeceEecCcccCCCCCe
Confidence 3334559999999999999999876653 999999994 32 678888 7899999
Q ss_pred cceeEEEEEecC---CCeEEEEEEEeCCCCCCCceeEEEEEeccc
Q 005736 363 WDSMFNMVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKY 404 (680)
Q Consensus 363 Wne~f~~~v~~~---~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~ 404 (680)
|||+|.|.+... ...|.|+|||+|.. .+|++||++.+++.+
T Consensus 82 wne~f~f~v~~~~l~~~~l~v~V~d~d~~-~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 82 FNELFVFDIPCESLEEISVEFLVLDSERG-SRNEVIGRLVLGATA 125 (153)
T ss_dssp EEEEEEEECCSSSSTTEEEEEEEEECCTT-SCCEEEEEEEESTTC
T ss_pred ecceEEEECCHHHhCceEEEEEEEeCCCC-CCCcEEEEEEECCCC
Confidence 999999998764 25799999999986 589999999999987
No 69
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=2.7e-14 Score=131.33 Aligned_cols=94 Identities=16% Similarity=0.110 Sum_probs=78.5
Q ss_pred cCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc-----eeeeecc-CCCCCCccc
Q 005736 291 KAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE-----LTRRTDA-RPGSDPRWD 364 (680)
Q Consensus 291 ~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~-----~~~~T~v-~~t~nP~Wn 364 (680)
....|.|.|+|++|++|+++|..| + ||||++.+.. ..++|++ ++++||+||
T Consensus 20 ~~~~~~L~v~v~~a~~L~~~d~~g-~----------------------dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wn 76 (142)
T 2dmg_A 20 SSQRNKLIVVVHACRNLIAFSEDG-S----------------------DPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFD 76 (142)
T ss_dssp ETTTTEEEEEEEEEECCCCSSTTC-C----------------------CEEEEEEEESCCCSSSCEECCCCCSCSSCEEE
T ss_pred eCCCCEEEEEEEEeECCCCCCCCC-C----------------------CeeEEEEEEcCCCCCCcccCCccCCCCCCCcC
Confidence 344599999999999999998766 4 9999999942 5778998 799999999
Q ss_pred eeEEEEEecC---CCeEEEEEEEeCCCCC-CCceeEEEEEecccccC
Q 005736 365 SMFNMVLHEE---TGTVRFNLYECIPGHV-KYDYLTSCEVKMKYVAD 407 (680)
Q Consensus 365 e~f~~~v~~~---~~~l~l~v~d~d~~~~-~d~~lG~~~i~l~~l~~ 407 (680)
|+|.|.+... ...|.|+|||+|..+. .|++||++.++|.++..
T Consensus 77 e~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~ 123 (142)
T 2dmg_A 77 QSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEEL 123 (142)
T ss_dssp EEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTT
T ss_pred ceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccc
Confidence 9999998642 3589999999997533 35799999999998853
No 70
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=2.4e-14 Score=132.50 Aligned_cols=101 Identities=18% Similarity=0.161 Sum_probs=79.9
Q ss_pred ccCcCeEEEEEEEecCCCCCC-CCCCCCcccccccCCCCccccccCCCCCCeEEEEEEc---ceeeeecc-CCCCCCccc
Q 005736 290 KKAVGGIVYVRVISASKLSRS-SLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE---ELTRRTDA-RPGSDPRWD 364 (680)
Q Consensus 290 ~~~~~G~L~V~v~~a~~L~~~-d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~---~~~~~T~v-~~t~nP~Wn 364 (680)
+.+..|.|.|+|++|++|++. |..|... . ...+||||++.+. ...++|++ ++++||+||
T Consensus 21 y~~~~~~L~V~v~~a~~L~~~~d~~g~~~---~-------------~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wn 84 (147)
T 2enp_A 21 YDLLHNHLTVRVIEARDLPPPISHDGSRQ---D-------------MAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFE 84 (147)
T ss_dssp EETTTTEEEEEEEEEECCCCSCSSCCSSC---T-------------TCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCC
T ss_pred EcCCCCEEEEEEEEEeCCCCccccccccc---c-------------CCCCCcEEEEEEEeCCCcceEeecccCCCCCeEe
Confidence 334569999999999999984 5433100 0 0024999999997 45788998 799999999
Q ss_pred eeEEEEEecC---CCeEEEEEEEeCCCCCCCceeEEEEEecccccC
Q 005736 365 SMFNMVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVAD 407 (680)
Q Consensus 365 e~f~~~v~~~---~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~ 407 (680)
|+|.|.+... ...|.|+|||+|.. .+|++||++.++|.++..
T Consensus 85 e~f~f~v~~~~l~~~~L~~~V~d~d~~-~~~~~iG~~~i~l~~l~~ 129 (147)
T 2enp_A 85 ERYTFEIPFLEAQRRTLLLTVVDFDKF-SRHCVIGKVSVPLCEVDL 129 (147)
T ss_dssp BCCEECCCHHHHHHSEEEEEEECCSTT-CCSCCCEEEEEETTTSCT
T ss_pred eeEEEEeChHHhccCEEEEEEEECCCC-cCCcEEEEEEEechhcCC
Confidence 9999998752 35899999999986 589999999999999854
No 71
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.52 E-value=5.4e-14 Score=157.39 Aligned_cols=116 Identities=21% Similarity=0.340 Sum_probs=104.4
Q ss_pred CCcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEeeecc-CCCCCeeeeEEEEEeeCC-ceEEEEEEEEecCC-CCc
Q 005736 486 TGRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIGG-GECLMVKCYNEEIF-GDE 562 (680)
Q Consensus 486 ~~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~~~~~T~~~-~t~nP~wne~f~f~v~~~-~~~L~i~V~d~~~~-~d~ 562 (680)
..+.|.|+|++|++|+.++..|.+||||+++++++.++|+++ +|+||.|||+|.|.+... ...|.|+|||++.. +|+
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d 464 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDD 464 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSCC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCCC
Confidence 356999999999999999989999999999999999999999 999999999999999764 57899999999988 899
Q ss_pred eeEEEEEEcccccCCCe----eeEEEeCCCCCCeEEEEEEEEE
Q 005736 563 NMGSARVNLEGLVEGSV----RDIWVPLEKVNTGELRLQIEAT 601 (680)
Q Consensus 563 ~iG~~~i~L~~l~~~~~----~~~w~~L~~~~~G~i~l~l~~~ 601 (680)
+||++.++|.++..+.. ...|++|.+..+|+|.++++..
T Consensus 465 ~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 465 FLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp EEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred ceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 99999999999875433 6799999998899999988654
No 72
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.51 E-value=1.5e-13 Score=124.32 Aligned_cols=94 Identities=20% Similarity=0.272 Sum_probs=75.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEeeecc--CCCCCeeeeEEEEEeeCCceEEEEEEEEecCC-CCcee
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA--HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-GDENM 564 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~~~~~T~~~--~t~nP~wne~f~f~v~~~~~~L~i~V~d~~~~-~d~~i 564 (680)
+.|.|+|++|+++.. .+.+||||++. + +..+|+++ ++.||.|||+|.|.+.+....|.|+|||++ . +|++|
T Consensus 5 ~~L~V~V~~A~~l~~---~g~~DPYv~v~-~-~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~i 78 (131)
T 2cjt_A 5 SLLCVGVKKAKFDGA---QEKFNTYVTLK-V-QNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTMV 78 (131)
T ss_dssp EEEEEEEEEEECSSC---GGGCEEEEEEE-E-TTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEEEE
T ss_pred eEEEEEEEEeECCCC---CCCcCeEEEEE-e-cCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCCeE
Confidence 589999999998852 57899999999 3 33445544 799999999999999877778999999999 6 89999
Q ss_pred EEEEEEcccccCCC--eeeEEEeCC
Q 005736 565 GSARVNLEGLVEGS--VRDIWVPLE 587 (680)
Q Consensus 565 G~~~i~L~~l~~~~--~~~~w~~L~ 587 (680)
|++.++|.++.... ....|.++.
T Consensus 79 G~~~i~l~~l~~~~~~~~~~~~~~~ 103 (131)
T 2cjt_A 79 GTVWIPLRTIRQSNEEGPGEWLTLD 103 (131)
T ss_dssp EEEEEEGGGSCBCSSCCCCEEEECB
T ss_pred EEEEEEHHHhhhcCCCCccccEEcc
Confidence 99999999986432 122565554
No 73
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.49 E-value=2.7e-13 Score=121.12 Aligned_cols=111 Identities=16% Similarity=0.224 Sum_probs=98.2
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEeeecc-C-CCCCeeeeEEEEEeeC---CceEEEEEEEEecCC-CC
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-H-SPNHVWNQKFELDEIG---GGECLMVKCYNEEIF-GD 561 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~~~~~T~~~-~-t~nP~wne~f~f~v~~---~~~~L~i~V~d~~~~-~d 561 (680)
..|+|.|.+|.+|+ +.+|||+++.+.+.+++|+++ + +.||+|||.|+|++.. .+..|.|.|+|++.. ++
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~n 95 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSN 95 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCC
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCC
Confidence 37999999999998 578999999999999999999 4 9999999999999874 478999999999998 99
Q ss_pred ceeEEEEEEcccccCCCeeeEEEeCCCCC----CeEEEEEEEEEEe
Q 005736 562 ENMGSARVNLEGLVEGSVRDIWVPLEKVN----TGELRLQIEATRV 603 (680)
Q Consensus 562 ~~iG~~~i~L~~l~~~~~~~~w~~L~~~~----~G~i~l~l~~~~~ 603 (680)
++||++.++|+++........+-+|.+.+ .+.|.+.++|.++
T Consensus 96 rlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 96 KLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp EEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEET
T ss_pred CEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCC
Confidence 99999999999998777666677776643 4899999999964
No 74
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.47 E-value=3.3e-13 Score=149.56 Aligned_cols=107 Identities=20% Similarity=0.347 Sum_probs=95.2
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEeeecc-CCCCCeeeeEEEEEeeC--CceEEEEEEEEecCC-CCc
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIG--GGECLMVKCYNEEIF-GDE 562 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~~~~~T~~~-~t~nP~wne~f~f~v~~--~~~~L~i~V~d~~~~-~d~ 562 (680)
.+.|+|+|++|++|+. |..+.+||||+|+++++.++|+++ +++||.|||+|.|.+.. ..+.|.|+|||+|.. +|+
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD 471 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDD 471 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCE
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCC
Confidence 4699999999999988 888999999999999999999999 99999999999998643 578899999999988 889
Q ss_pred eeEEEEEEcccccCCCeeeEEEeCCCCCCeEEEEEEEEE
Q 005736 563 NMGSARVNLEGLVEGSVRDIWVPLEKVNTGELRLQIEAT 601 (680)
Q Consensus 563 ~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~i~l~l~~~ 601 (680)
+||++.++|.. ..+..|++|. .|.|+++++..
T Consensus 472 ~LG~~~~~L~~----g~~~~~~~l~---~G~l~~~~~~~ 503 (540)
T 3nsj_A 472 LLGSCDRSPHS----GFHEVTCELN---HGRVKFSYHAK 503 (540)
T ss_dssp EEEEEEECCCS----EEEEEEEECS---SSEEEEEEEEE
T ss_pred EEEEEEEEeeC----CcEEEEEEcC---CeEEEEEEEEE
Confidence 99999999883 3467899986 59999988755
No 75
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.47 E-value=1.2e-13 Score=124.96 Aligned_cols=86 Identities=13% Similarity=0.203 Sum_probs=70.7
Q ss_pred cCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcceeeeec-cC-CCCCCccceeEEEE
Q 005736 293 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELTRRTD-AR-PGSDPRWDSMFNMV 370 (680)
Q Consensus 293 ~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~~~~T~-v~-~t~nP~Wne~f~~~ 370 (680)
+.|.|.|+|++|+++.. .|. +||||+++ + +..+|+ ++ ++.||+|||+|.|.
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~----------------------~DPYv~v~-~-~~~kt~~~~~~t~nP~WnE~f~f~ 55 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEK----------------------FNTYVTLK-V-QNVKSTTIAVRGSQPSWEQDFMFE 55 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGG----------------------CEEEEEEE-E-TTEEEECCCEESSSCEEEEEEEEE
T ss_pred cceEEEEEEEEeECCCC---CCC----------------------cCeEEEEE-e-cCEEEeEecCCCCCceECCEEEEE
Confidence 45999999999998852 232 39999999 3 333444 44 79999999999999
Q ss_pred EecCCCeEEEEEEEeCCCCCCCceeEEEEEecccccC
Q 005736 371 LHEETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVAD 407 (680)
Q Consensus 371 v~~~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~ 407 (680)
+.+....|.|+|||+| . .+|++||++.++|.++..
T Consensus 56 v~~~~~~L~~~V~D~d-~-~~dd~iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 56 INRLDLGLTVEVWNKG-L-IWDTMVGTVWIPLRTIRQ 90 (131)
T ss_dssp ECCCSSEEEEEEEECC-S-SCEEEEEEEEEEGGGSCB
T ss_pred EeCCCCeEEEEEEECC-C-CCCCeEEEEEEEHHHhhh
Confidence 9887778999999999 5 689999999999999864
No 76
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.45 E-value=5.2e-13 Score=148.00 Aligned_cols=165 Identities=15% Similarity=0.155 Sum_probs=121.6
Q ss_pred ecCCCe-EEEEEEEcCCCCCccCcc-cCccHHHHHHHHHHHHHhhcccc-------CcceEEeccc---------cc---
Q 005736 229 FVSIPD-VRIGVAFGSGGSQSLPAT-ELPGVSNWLARLINETLVKTLVE-------PRRRCYSLPA---------VD--- 287 (680)
Q Consensus 229 f~~~P~-id~~~~~~~~~~~~~~i~-~iP~l~~~i~~~i~~~~~~~~v~-------P~~~~~~l~~---------~~--- 287 (680)
+-..|. |+|.+.++.. +. .-+--..-++.+|.+.+...-.. ||-.. ++.. ..
T Consensus 311 v~~~P~~I~~~l~PI~~------Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~~-~l~g~~C~C~C~~~~~t~ 383 (540)
T 3nsj_A 311 LPSNPGLVDYSLEPLHT------LLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQH-KSSHDSCQCECQDSKVTN 383 (540)
T ss_dssp TTTSCEEEEEEEEEGGG------GSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTEE-ECSSCTTCEEESCTTTBC
T ss_pred HhhCCceEEEEEEEHHH------hcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCCc-cCCCCceEeeCCCCCCcc
Confidence 344666 5899986653 22 23567788888888888776555 23321 1311 00
Q ss_pred ---ccccCcCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcceeeeecc-CCCCCCcc
Q 005736 288 ---LRKKAVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELTRRTDA-RPGSDPRW 363 (680)
Q Consensus 288 ---~~~~~~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~~~~T~v-~~t~nP~W 363 (680)
-......|.|+|+|++|++|++ |..|.+ ||||+|.++++..+|++ ++++||+|
T Consensus 384 ~~~C~~~~~~~~L~V~V~~A~~L~~-D~~g~s----------------------DPYV~v~l~~~~~kTkvik~tlNP~W 440 (540)
T 3nsj_A 384 QDCCPRQRGLAHLVVSNFRAEHLWG-DYTTAT----------------------DAYLKVFFGGQEFRTGVVWNNNNPRW 440 (540)
T ss_dssp GGGCBSSTTEEEEEEEEEEEESCCC-SSCSCC----------------------CEEEEEEETTEEEECCCBCSCSSCBC
T ss_pred cccccccCcccEEEEEEEEccCCCc-ccCCCc----------------------CeEEEEEECCEeeeeeeecCCCCCCC
Confidence 0111224899999999999998 876654 99999999999999998 89999999
Q ss_pred ceeEEEEEec--CCCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCC
Q 005736 364 DSMFNMVLHE--ETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEG 441 (680)
Q Consensus 364 ne~f~~~v~~--~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~ 441 (680)
||+|.|.+.+ ..+.|.|+|||+|.. .+||+||++.++|.. | .++.|++++
T Consensus 441 ne~f~f~~~~~~~~~~L~~~V~D~D~~-~~dD~LG~~~~~L~~-------------------------g-~~~~~~~l~- 492 (540)
T 3nsj_A 441 TDKMDFENVLLSTGGPLRVQVWDADYG-WDDDLLGSCDRSPHS-------------------------G-FHEVTCELN- 492 (540)
T ss_dssp CCCEEEEEEETTTCCCEEEEEEECCSS-SCCEEEEEEEECCCS-------------------------E-EEEEEEECS-
T ss_pred CeEEEEEEecCCCCCEEEEEEEECCCC-CCCCEEEEEEEEeeC-------------------------C-cEEEEEEcC-
Confidence 9999998654 467899999999986 589999999999872 1 356788765
Q ss_pred CceeeEEEEEEE
Q 005736 442 VNSGELTVRLVL 453 (680)
Q Consensus 442 ~~~G~l~~~l~l 453 (680)
+|.|++.+.+
T Consensus 493 --~G~l~~~~~~ 502 (540)
T 3nsj_A 493 --HGRVKFSYHA 502 (540)
T ss_dssp --SSEEEEEEEE
T ss_pred --CeEEEEEEEE
Confidence 5888877654
No 77
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.45 E-value=3.4e-13 Score=150.90 Aligned_cols=121 Identities=18% Similarity=0.309 Sum_probs=101.0
Q ss_pred cCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcceeeeecc-CCCCCCccceeEEEEE
Q 005736 293 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELTRRTDA-RPGSDPRWDSMFNMVL 371 (680)
Q Consensus 293 ~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~~~~T~v-~~t~nP~Wne~f~~~v 371 (680)
..|.|+|+|++|++|++.|..|.+ ||||++.+++..++|++ ++|+||+|||+|.|.+
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~s----------------------dpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~ 442 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKS----------------------NPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFI 442 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCC----------------------CEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEE
T ss_pred CCceEEEEeceeecCCCCCCCCCC----------------------CeEEEEEECCeeccCCccCCCCCCccCceEEEEe
Confidence 358999999999999999876654 99999999999999998 7999999999999999
Q ss_pred ecC-CCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCceeeeeCCCcchhhhhhhccCceeeeeeccCCCceeeEEEE
Q 005736 372 HEE-TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGVNSGELTVR 450 (680)
Q Consensus 372 ~~~-~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~G~l~~~ 450 (680)
... .+.|.|+|||+|.. ++|++||++.+++.++..+.. .......|+++.+...|++.+.
T Consensus 443 ~~~~~~~l~~~v~d~d~~-~~~d~lG~~~~~l~~l~~~~~------------------~~~~~~~~~~l~~~~~G~i~l~ 503 (510)
T 3jzy_A 443 KDLYQDVLCLTLFDRDQF-SPDDFLGRTEIPVAKIRTEQE------------------SKGPMTRRLLLHEVPTGEVWVR 503 (510)
T ss_dssp SCTTTCEEEEEEEECCSS-SSCCEEEEEEEEHHHHHHHHH------------------HHCSCCEEEECBSSSSCEEEEE
T ss_pred cCCCCCEEEEEEEeCCCC-CCCCceEEEEEEHHHhccccC------------------CCCceeeeecCCCCCCceEEEE
Confidence 876 46799999999986 589999999999999853210 0013567889988888999988
Q ss_pred EEEe
Q 005736 451 LVLK 454 (680)
Q Consensus 451 l~l~ 454 (680)
+.+.
T Consensus 504 ~~l~ 507 (510)
T 3jzy_A 504 FDLQ 507 (510)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 78
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.44 E-value=4.9e-13 Score=126.04 Aligned_cols=84 Identities=20% Similarity=0.213 Sum_probs=72.2
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEEEeeecc--CCCCCeeeeEEEEEeeCCceEEEEEEEEecCC-CCce
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA--HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-GDEN 563 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~~~~~T~~~--~t~nP~wne~f~f~v~~~~~~L~i~V~d~~~~-~d~~ 563 (680)
.+.|.|+|++|+++. ..+.+||||++. .+..+|+++ ++.||.|||+|.|.+.+....|.|+|||++ . +|++
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~ 86 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTM 86 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCEE
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCce
Confidence 358999999999884 257899999999 334566655 799999999999999877778999999999 6 8999
Q ss_pred eEEEEEEcccccC
Q 005736 564 MGSARVNLEGLVE 576 (680)
Q Consensus 564 iG~~~i~L~~l~~ 576 (680)
||++.++|.++..
T Consensus 87 iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 87 VGTVWIPLRTIRQ 99 (167)
T ss_dssp EEEEEEEGGGSCB
T ss_pred EEEEEEEHHHhcc
Confidence 9999999999864
No 79
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.38 E-value=8.4e-13 Score=124.43 Aligned_cols=85 Identities=12% Similarity=0.185 Sum_probs=70.5
Q ss_pred CeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcceeeeecc-C-CCCCCccceeEEEEE
Q 005736 294 GGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELTRRTDA-R-PGSDPRWDSMFNMVL 371 (680)
Q Consensus 294 ~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~~~~T~v-~-~t~nP~Wne~f~~~v 371 (680)
.|+|+|+|++|+++.. .|. +||||+++ .+..+|++ + ++.||+|||+|.|.+
T Consensus 13 ~~~L~V~V~~A~~l~~---~g~----------------------~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v 65 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGA---QEK----------------------FNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEI 65 (167)
T ss_dssp CCEEEEEEEEEECSSC---GGG----------------------CEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEC
T ss_pred eEEEEEEEEEEECCCC---CCC----------------------CCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEe
Confidence 4899999999998742 232 39999999 33445554 4 699999999999999
Q ss_pred ecCCCeEEEEEEEeCCCCCCCceeEEEEEecccccC
Q 005736 372 HEETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVAD 407 (680)
Q Consensus 372 ~~~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~ 407 (680)
.+....|.|+|||+| . .+|++||++.|+|.++..
T Consensus 66 ~~~~~~L~~~V~D~d-~-~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 66 NRLDLGLTVEVWNKG-L-IWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp CCTTSEEEEEEEECC-S-SCCEEEEEEEEEGGGSCB
T ss_pred eCCCCEEEEEEEECC-C-CCCceEEEEEEEHHHhcc
Confidence 987778999999999 5 589999999999999864
No 80
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.34 E-value=5.6e-12 Score=112.62 Aligned_cols=85 Identities=7% Similarity=0.161 Sum_probs=76.0
Q ss_pred EEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcceeeeecc-C-CCCCCccceeEEEEEec
Q 005736 296 IVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELTRRTDA-R-PGSDPRWDSMFNMVLHE 373 (680)
Q Consensus 296 ~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~~~~T~v-~-~t~nP~Wne~f~~~v~~ 373 (680)
.|+|+|.+|++|+. . .|||+++.+.+.+++|++ + ++.||+|||+|.+.+..
T Consensus 22 sL~V~l~~a~~Lpg-----~----------------------~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~ 74 (144)
T 3l9b_A 22 ALIVHLKTVSELRG-----R----------------------ADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVAS 74 (144)
T ss_dssp EEEEEEEEEESCCS-----C----------------------EEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESS
T ss_pred EEEEEEEEecCCCC-----C----------------------CCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCC
Confidence 79999999999994 2 299999999999999998 6 69999999999999886
Q ss_pred C---CCeEEEEEEEeCCCCCCCceeEEEEEecccccCC
Q 005736 374 E---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADD 408 (680)
Q Consensus 374 ~---~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~ 408 (680)
. ++.|.+.|+|+++. .++++||++.++|+++...
T Consensus 75 ~ld~~e~L~v~V~d~~~v-~~nrlIG~~~i~Lq~lv~~ 111 (144)
T 3l9b_A 75 SIDRNEVLEIQIFNYSKV-FSNKLIGTFRMVLQKVVEE 111 (144)
T ss_dssp CCCTTCEEEEEEEEECTT-SCCEEEEEEEEESHHHHHH
T ss_pred CCCCCCEEEEEEEECccc-cCCCEEEEEEEEhHHhccC
Confidence 3 56899999999998 5999999999999999643
No 81
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.32 E-value=2.6e-12 Score=146.61 Aligned_cols=108 Identities=25% Similarity=0.370 Sum_probs=96.0
Q ss_pred CcEEEEEEEEeecCCC---CCCCCCCCcEEEEEEC---CEEEeeecc-CCCCCeeeeEEEEEeeC-CceEEEEEEEEecC
Q 005736 487 GRKINVTVVEGKDLMP---KDKSGKCDPYVKLQYG---KIVQRTRTA-HSPNHVWNQKFELDEIG-GGECLMVKCYNEEI 558 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~---~~~~~~~dpyv~v~l~---~~~~~T~~~-~t~nP~wne~f~f~v~~-~~~~L~i~V~d~~~ 558 (680)
.+.|.|+|++|++|+. ++..+.+||||+++++ ..+++|+++ +++||+|||+|.|.+.. ....|.|+|||++.
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D~ 96 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 96 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECCS
T ss_pred ccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECCC
Confidence 4699999999999988 7777899999999996 478999999 99999999999999987 46789999999997
Q ss_pred CCCceeEEEEEEcccccCCCeeeEEEeCCCCCCeEEEE
Q 005736 559 FGDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGELRL 596 (680)
Q Consensus 559 ~~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~i~l 596 (680)
..|++||++.++|.++..+.....|++|.+. +++.+
T Consensus 97 ~~ddfIG~v~I~L~~L~~g~~~~~w~~L~~~--~e~~l 132 (749)
T 1cjy_A 97 VMDETLGTATFTVSSMKVGEKKEVPFIFNQV--TEMVL 132 (749)
T ss_dssp SSCEEEEEECCBSTTSCTTCCCCEEEEETTT--EEEEE
T ss_pred CCCceeEEEEEEHHHcCCCCceEEEEecCCC--ceEee
Confidence 7789999999999999888888999999874 55444
No 82
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.30 E-value=2.1e-11 Score=138.18 Aligned_cols=112 Identities=19% Similarity=0.273 Sum_probs=93.4
Q ss_pred CCcEEEEEEEEeecCCCCCC--CCCCCcEEEEEE-C----CEEEeeecc-CC-CCCeeeeEEEEEeeCC-ceEEEEEEEE
Q 005736 486 TGRKINVTVVEGKDLMPKDK--SGKCDPYVKLQY-G----KIVQRTRTA-HS-PNHVWNQKFELDEIGG-GECLMVKCYN 555 (680)
Q Consensus 486 ~~~~L~V~I~~a~~L~~~~~--~~~~dpyv~v~l-~----~~~~~T~~~-~t-~nP~wne~f~f~v~~~-~~~L~i~V~d 555 (680)
..+.|+|+|++|++|+..+. .+.+||||+|.+ + ..+++|+++ ++ .||.|||+|.|.+..+ ...|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 34689999999999998873 688999999999 3 278999999 76 9999999999998865 4789999999
Q ss_pred ecCC-CCceeEEEEEEcccccCCCeeeEEEeCCCCC-----CeEEEEEEEE
Q 005736 556 EEIF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVN-----TGELRLQIEA 600 (680)
Q Consensus 556 ~~~~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~-----~G~i~l~l~~ 600 (680)
++.. ++++||++.++|.++..+ .+|++|.+.. .|.|.+.+++
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G---~r~v~L~d~~g~~~~~~~L~v~i~~ 622 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG---YRHVHLLSKNGDQHPSATLFVKISI 622 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE---EEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCC---cEEEeCCCCCcCCCCceEEEEEEEE
Confidence 9988 899999999999998754 3689997643 2556666655
No 83
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.25 E-value=9.8e-12 Score=141.91 Aligned_cols=92 Identities=16% Similarity=0.335 Sum_probs=80.5
Q ss_pred cCeEEEEEEEecCCCCC---CCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEc---ceeeeecc-CCCCCCccce
Q 005736 293 VGGIVYVRVISASKLSR---SSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE---ELTRRTDA-RPGSDPRWDS 365 (680)
Q Consensus 293 ~~G~L~V~v~~a~~L~~---~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~---~~~~~T~v-~~t~nP~Wne 365 (680)
+.|.|+|+|++|++|++ +|..|.+ ||||++.++ ...++|++ ++++||+|||
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~s----------------------DPYV~V~l~~~~~~k~kTkvik~tlNPvWNE 73 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTP----------------------DPYVELFISTTPDSRKRTRHFNNDINPVWNE 73 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCC----------------------CEEEEEECTTSTTCCEECCCCTTCSSCEEEE
T ss_pred CccEEEEEEEEEECCCCccccCCCCCc----------------------CeEEEEEEecCCCCeEecceEcCCCCCeeee
Confidence 45999999999999998 7765543 999999998 46789998 7999999999
Q ss_pred eEEEEEecC-CCeEEEEEEEeCCCCCCCceeEEEEEecccccCC
Q 005736 366 MFNMVLHEE-TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADD 408 (680)
Q Consensus 366 ~f~~~v~~~-~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~ 408 (680)
+|.|.+... .+.|.|+|||+|.. + |++||++.++|.++..+
T Consensus 74 tF~F~v~~~~~~~L~~~V~D~D~~-~-ddfIG~v~I~L~~L~~g 115 (749)
T 1cjy_A 74 TFEFILDPNQENVLEITLMDANYV-M-DETLGTATFTVSSMKVG 115 (749)
T ss_dssp EEEEEECTTSCCBCEEEEEECCSS-S-CEEEEEECCBSTTSCTT
T ss_pred EEEEEecCCCCCEEEEEEEECCCC-C-CceeEEEEEEHHHcCCC
Confidence 999999874 57899999999986 5 99999999999998643
No 84
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.25 E-value=5.2e-13 Score=147.48 Aligned_cols=97 Identities=20% Similarity=0.410 Sum_probs=14.1
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCE-EEeeecc-CC---CCCeeeeEEEEEeeCCceEEEEEEEEe-cC--
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKI-VQRTRTA-HS---PNHVWNQKFELDEIGGGECLMVKCYNE-EI-- 558 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~~-~~~T~~~-~t---~nP~wne~f~f~v~~~~~~L~i~V~d~-~~-- 558 (680)
.+.|+|+|++|++|++++ ||||+++++++ ..||+++ +| .||.|||+|.|.+.+....|.|+|||+ +.
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~~ 84 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKKR 84 (483)
T ss_dssp EECC--------------------------------------------------CCEECC--------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCccc
Confidence 457999999999998776 99999999764 6799999 99 999999999999765568899999995 42
Q ss_pred -C-CCceeEEEEEEcccccCCCeeeEEEeCCC
Q 005736 559 -F-GDENMGSARVNLEGLVEGSVRDIWVPLEK 588 (680)
Q Consensus 559 -~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~ 588 (680)
. +|++||.+.|++.++..+...+.||+|.+
T Consensus 85 ~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 85 KKDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp ----------------------CCEECC----
T ss_pred cCCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 3 89999999999999988777889999953
No 85
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.20 E-value=1.1e-10 Score=132.33 Aligned_cols=92 Identities=21% Similarity=0.325 Sum_probs=77.9
Q ss_pred cCeEEEEEEEecCCCCCCCC--CCCCcccccccCCCCccccccCCCCCCeEEEEEEcc-----eeeeecc-CCC-CCCcc
Q 005736 293 VGGIVYVRVISASKLSRSSL--RGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE-----LTRRTDA-RPG-SDPRW 363 (680)
Q Consensus 293 ~~G~L~V~v~~a~~L~~~d~--~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~-----~~~~T~v-~~t-~nP~W 363 (680)
..+.|+|+|++|++|+..+. .|. +||||+|.+.+ ..++|++ +++ .||+|
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~----------------------~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~W 552 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSI----------------------VDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRW 552 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSC----------------------CCEEEEEEEESSGGGCEEEECCCCTTCSSSCEE
T ss_pred cceEEEEEEEEcCCCCcccccccCC----------------------CCcEEEEEEecCCCCcceeecccccCCCCCCcc
Confidence 35899999999999998873 232 49999999943 6789997 665 99999
Q ss_pred ceeEEEEEecCC-CeEEEEEEEeCCCCCCCceeEEEEEecccccC
Q 005736 364 DSMFNMVLHEET-GTVRFNLYECIPGHVKYDYLTSCEVKMKYVAD 407 (680)
Q Consensus 364 ne~f~~~v~~~~-~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~ 407 (680)
||+|.|.+.... ..|+|+|||+|.. ++|++||++.++|..|..
T Consensus 553 nE~f~F~v~~~el~~L~~~V~D~D~~-~~dd~iG~~~ipl~~L~~ 596 (624)
T 1djx_A 553 DMEFEFEVTVPDLALVRFMVEDYDSS-SKNDFIGQSTIPWNSLKQ 596 (624)
T ss_dssp EEEEEEEESCGGGCEEEEEEEECCSS-SCCEEEEEEEEEGGGBCC
T ss_pred CceEEEEEecCCCCEEEEEEEEcCCC-CCCceeEEEEEEHHHcCC
Confidence 999999998753 6799999999986 589999999999999853
No 86
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.12 E-value=6.5e-12 Score=138.71 Aligned_cols=88 Identities=18% Similarity=0.288 Sum_probs=9.0
Q ss_pred CeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcce-eeeecc-CCC---CCCccceeEE
Q 005736 294 GGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEEL-TRRTDA-RPG---SDPRWDSMFN 368 (680)
Q Consensus 294 ~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~~-~~~T~v-~~t---~nP~Wne~f~ 368 (680)
.|.|+|+|++|++|+++| ||||++.+++. ..+|++ ++| +||+|||+|.
T Consensus 10 ~~~L~V~VieAk~L~~~d---------------------------dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~ 62 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK---------------------------RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFE 62 (483)
T ss_dssp EECC------------------------------------------------------------------------CCEE
T ss_pred ccEEEEEEEEcCCcCCCC---------------------------CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEE
Confidence 489999999999998865 89999999865 568888 677 9999999999
Q ss_pred EEEecCCCeEEEEEEEe-CC--CCCCCceeEEEEEecccccCC
Q 005736 369 MVLHEETGTVRFNLYEC-IP--GHVKYDYLTSCEVKMKYVADD 408 (680)
Q Consensus 369 ~~v~~~~~~l~l~v~d~-d~--~~~~d~~lG~~~i~l~~l~~~ 408 (680)
|.+....+.|.++|||. |. ...+|++||++.|++.++..+
T Consensus 63 f~~~~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~ 105 (483)
T 3bxj_A 63 FNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGR 105 (483)
T ss_dssp CC-----------------------------------------
T ss_pred EecCCCccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCC
Confidence 98655567899999994 42 125899999999999998643
No 87
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.04 E-value=3.6e-10 Score=130.37 Aligned_cols=104 Identities=30% Similarity=0.477 Sum_probs=91.5
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCEEEeeecc-CCCCCeeeeEEEEEeeC--CceEEEEEEEEecCC
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEIG--GGECLMVKCYNEEIF 559 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l-----~~~~~~T~~~-~t~nP~wne~f~f~v~~--~~~~L~i~V~d~~~~ 559 (680)
+.|.|++.+|++|.+++..+.+||||++++ ...+++|+++ +++||.|||+|.|.+.. ....|.|+|||++..
T Consensus 172 ~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~~ 251 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLT 251 (674)
T ss_dssp SEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCSS
T ss_pred ceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecccc
Confidence 489999999999999999999999999999 3468899999 99999999999999875 356799999999988
Q ss_pred -CCceeEEEEEEcccccCCCeeeEEEeCCCCCCe
Q 005736 560 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTG 592 (680)
Q Consensus 560 -~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G 592 (680)
+|++||++.+++.++.... ...|+.|.....|
T Consensus 252 ~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~~~g 284 (674)
T 3pfq_A 252 SRNDFMGSLSFGISELQKAG-VDGWFKLLSQEEG 284 (674)
T ss_dssp SCCEECCBCCCBTTHHHHCC-EEEEEECBCTTGG
T ss_pred cccccccccccchhhhccCC-cccceeecccccc
Confidence 8999999999999987654 4799999765444
No 88
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.94 E-value=9.1e-10 Score=127.02 Aligned_cols=94 Identities=17% Similarity=0.356 Sum_probs=81.1
Q ss_pred CeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEE-----cceeeeecc-CCCCCCccceeE
Q 005736 294 GGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIEL-----EELTRRTDA-RPGSDPRWDSMF 367 (680)
Q Consensus 294 ~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~-----~~~~~~T~v-~~t~nP~Wne~f 367 (680)
.+.|.|+|.+|++|.++|..|.+ ||||++.+ .....+|++ ++++||.|||+|
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~s----------------------DPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f 228 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLS----------------------DPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETF 228 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSC----------------------CEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEE
T ss_pred cceeeeeeecccccCCCCccccc----------------------CcccccccccCccccccccccccccccCCCcccee
Confidence 48999999999999999977654 99999998 345788998 799999999999
Q ss_pred EEEEecC--CCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCc
Q 005736 368 NMVLHEE--TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDST 410 (680)
Q Consensus 368 ~~~v~~~--~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~ 410 (680)
.|.+... ...|.++|||+|.. .+|++||++.+++.++.....
T Consensus 229 ~f~~~~~~~~~~L~v~v~d~d~~-~~dd~iG~~~i~l~~l~~~~~ 272 (674)
T 3pfq_A 229 RFQLKESDKDRRLSVEIWDWDLT-SRNDFMGSLSFGISELQKAGV 272 (674)
T ss_dssp EEECCSTTTTCEEEEEEEECCSS-SCCEECCBCCCBTTHHHHCCE
T ss_pred eeecccCCccceeeeEEeecccc-cccccccccccchhhhccCCc
Confidence 9998754 45699999999987 699999999999999865433
No 89
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.93 E-value=2.6e-08 Score=86.23 Aligned_cols=108 Identities=9% Similarity=0.217 Sum_probs=85.6
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCEE----Eee-ecc-CCCCCeeeeEEEEEeeCCceEEEEEEEEecCCCC
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIV----QRT-RTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIFGD 561 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~~~----~~T-~~~-~t~nP~wne~f~f~v~~~~~~L~i~V~d~~~~~d 561 (680)
..|+|.+.+..--+........||||.|.++... .+| ..+ +|..|.||+.|.-.+. ....|.|.|++.. .
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a---~ 81 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY-EGRVIQIVLMRAA---E 81 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC-TTCEEEEEEEEET---T
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee-CCEEEEEEEEcCC---C
Confidence 3789998777643322233568999999996532 255 666 9999999999999987 4667999999765 3
Q ss_pred ceeEEEEEEccccc-----CCCeeeEEEeCCCCCCeEEEEEEEEE
Q 005736 562 ENMGSARVNLEGLV-----EGSVRDIWVPLEKVNTGELRLQIEAT 601 (680)
Q Consensus 562 ~~iG~~~i~L~~l~-----~~~~~~~w~~L~~~~~G~i~l~l~~~ 601 (680)
++++.|+|++.+|. .+...+.|+.|++ +|+|++.++|.
T Consensus 82 ~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP--~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP--QAKVLMSVQYF 124 (126)
T ss_dssp EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS--SCEEEEEEEEE
T ss_pred CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEe
Confidence 89999999999988 3457789999997 89999999886
No 90
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.80 E-value=1.9e-08 Score=116.65 Aligned_cols=94 Identities=22% Similarity=0.347 Sum_probs=77.4
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE-C---C--EEEeee-cc--CCCCCeeee-EEEE-EeeCC-ceEEEEEEE
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQY-G---K--IVQRTR-TA--HSPNHVWNQ-KFEL-DEIGG-GECLMVKCY 554 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l-~---~--~~~~T~-~~--~t~nP~wne-~f~f-~v~~~-~~~L~i~V~ 554 (680)
.+.|.|+|++|++|+. +.+||||+|.+ | . ++++|+ ++ ++.||+||| +|.| .+..+ -..|+|+||
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 4689999999999974 46899999999 3 1 368999 77 569999999 6999 77654 458999999
Q ss_pred EecCCCCceeEEEEEEcccccCCCeeeEEEeCCCCC
Q 005736 555 NEEIFGDENMGSARVNLEGLVEGSVRDIWVPLEKVN 590 (680)
Q Consensus 555 d~~~~~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 590 (680)
|++ +++||++.+||..+..+ .+|++|.+..
T Consensus 753 D~d---~d~iG~~~ipl~~L~~G---~r~v~L~~~~ 782 (799)
T 2zkm_X 753 EEG---NKFLGHRIIPINALNSG---YHHLCLHSES 782 (799)
T ss_dssp ETT---TEEEEEEEEEGGGBCCE---EEEEEEECTT
T ss_pred EeC---CCccceEeeehhhcCCC---cEEEeccCCC
Confidence 996 79999999999998654 4678887643
No 91
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.80 E-value=1.6e-08 Score=117.37 Aligned_cols=105 Identities=24% Similarity=0.314 Sum_probs=83.7
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------EEEeeecc-C-CCCCeeee-EEEEE-eeCC-ceEEEEEEEE
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK------IVQRTRTA-H-SPNHVWNQ-KFELD-EIGG-GECLMVKCYN 555 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~------~~~~T~~~-~-t~nP~wne-~f~f~-v~~~-~~~L~i~V~d 555 (680)
...|.|+|++|++|+. ..+||||+|.+.+ .+++|+++ + +.||+||| +|.|. +..+ ...|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~----~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSD----RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCcc----cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 3489999999999975 3589999999943 35799998 5 69999999 69998 6544 5689999999
Q ss_pred ecCCCCceeEEEEEEcccccCCCeeeEEEeCCCCC-----CeEEEEEEEEE
Q 005736 556 EEIFGDENMGSARVNLEGLVEGSVRDIWVPLEKVN-----TGELRLQIEAT 601 (680)
Q Consensus 556 ~~~~~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~-----~G~i~l~l~~~ 601 (680)
++ +++||++.+||..|..+. ++++|.+.. .|.|.+.+.+.
T Consensus 800 ~d---ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 800 EG---GKFVGHRILPVSAIRSGY---HYVCLRNEANQPLCLPALLIYTEAS 844 (885)
T ss_dssp TT---TEEEEEEEEETTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred CC---ccEEeeEEEEHHHcCCCc---eEEEecCCCCCccCceEEEEEEEEE
Confidence 86 799999999999987653 457776643 36677777666
No 92
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.79 E-value=5e-08 Score=85.57 Aligned_cols=108 Identities=11% Similarity=0.204 Sum_probs=85.9
Q ss_pred cEEEEEEEEeecCCCCC-CCCCCCcEEEEEECCE-E---Eee-ecc-CCCCCeeeeEEEEEeeCCceEEEEEEEEecCCC
Q 005736 488 RKINVTVVEGKDLMPKD-KSGKCDPYVKLQYGKI-V---QRT-RTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIFG 560 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~-~~~~~dpyv~v~l~~~-~---~~T-~~~-~t~nP~wne~f~f~v~~~~~~L~i~V~d~~~~~ 560 (680)
..|+|.+.+..-.+... .....||||.|.++.. . .+| ..+ +|..|.||+.|.-.+. ....|.|.|++..
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a--- 85 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN-KGRVMQIIVKGKN--- 85 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC-SSCEEEEEEECSS---
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE-CCeEEEEEEEcCC---
Confidence 36899998877543322 2346899999999643 3 677 666 8999999999998887 4667999999654
Q ss_pred CceeEEEEEEccccc-----CCCeeeEEEeCCCCCCeEEEEEEEEE
Q 005736 561 DENMGSARVNLEGLV-----EGSVRDIWVPLEKVNTGELRLQIEAT 601 (680)
Q Consensus 561 d~~iG~~~i~L~~l~-----~~~~~~~w~~L~~~~~G~i~l~l~~~ 601 (680)
.+++..|+|++.+|. .+...+.|+.|++ +|+|++.++|.
T Consensus 86 ~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--~Gkl~v~i~~~ 129 (138)
T 2enj_A 86 VDLISETTVELYSLAERCRKNNGKTEIWLELKP--QGRMLMNARYF 129 (138)
T ss_dssp CSCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--SCEEEEEEEEC
T ss_pred CCeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEE
Confidence 389999999999998 3456789999997 89999999986
No 93
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.79 E-value=3e-08 Score=114.44 Aligned_cols=105 Identities=17% Similarity=0.263 Sum_probs=83.3
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-------EEEeeecc-C-CCCCeeeeE-EEEE-eeCC-ceEEEEEEE
Q 005736 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK-------IVQRTRTA-H-SPNHVWNQK-FELD-EIGG-GECLMVKCY 554 (680)
Q Consensus 487 ~~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l~~-------~~~~T~~~-~-t~nP~wne~-f~f~-v~~~-~~~L~i~V~ 554 (680)
.+.|.|+|++|++|+.. .+||||+|.+.+ .+++|+++ + +.||+|||+ |.|. +..+ -..|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 35899999999999753 589999999943 67899998 4 699999998 9998 7654 468999999
Q ss_pred EecCCCCceeEEEEEEcccccCCCeeeEEEeCCCCCC-----eEEEEEEEEE
Q 005736 555 NEEIFGDENMGSARVNLEGLVEGSVRDIWVPLEKVNT-----GELRLQIEAT 601 (680)
Q Consensus 555 d~~~~~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~-----G~i~l~l~~~ 601 (680)
|++ +++||++.++|+.+..+. ++++|.+... +.|.+.+...
T Consensus 725 D~d---ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 725 EEN---GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp ETT---SCEEEEEEEESTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred ecC---CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCCCceEEEEEEEEE
Confidence 985 799999999999987653 5677876432 4555555544
No 94
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.75 E-value=5.5e-08 Score=112.27 Aligned_cols=82 Identities=22% Similarity=0.323 Sum_probs=67.9
Q ss_pred eEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc-------eeeeecc-C-CCCCCccce
Q 005736 295 GIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE-------LTRRTDA-R-PGSDPRWDS 365 (680)
Q Consensus 295 G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~-------~~~~T~v-~-~t~nP~Wne 365 (680)
+.|.|+|++|++|+... .||||+|.+.+ .+++|++ + ++.||+|||
T Consensus 650 ~~L~V~Visaq~L~~~~--------------------------~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE 703 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDKQ--------------------------ISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDE 703 (816)
T ss_dssp EEEEEEEEEEECCCSSC--------------------------CCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCC
T ss_pred eEEEEEEEEcccCCCCC--------------------------CCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcC
Confidence 78999999999997531 39999999863 5678987 5 579999999
Q ss_pred e-EEEE-EecC-CCeEEEEEEEeCCCCCCCceeEEEEEecccccC
Q 005736 366 M-FNMV-LHEE-TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVAD 407 (680)
Q Consensus 366 ~-f~~~-v~~~-~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~ 407 (680)
+ |.|. +..+ ...|+|+|||+| |++||++.++|..|..
T Consensus 704 ~~F~F~~v~~pela~Lrf~V~D~d-----ddfiG~~~ipL~~L~~ 743 (816)
T 3qr0_A 704 KVFVFKKVVLPDLAVVRIIVSEEN-----GKFIGHRVMPLDGIKP 743 (816)
T ss_dssp CCEEEEEESCGGGCEEEEEEEETT-----SCEEEEEEEESTTCCC
T ss_pred ceeEEccccCCCccEEEEEEEecC-----CCeeeEEEEEHHHcCC
Confidence 8 9998 7554 357999999963 7999999999999863
No 95
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.73 E-value=4.8e-08 Score=113.40 Aligned_cols=82 Identities=20% Similarity=0.307 Sum_probs=67.0
Q ss_pred eEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc------eeeeecc-C-CCCCCccce-
Q 005736 295 GIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE------LTRRTDA-R-PGSDPRWDS- 365 (680)
Q Consensus 295 G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~------~~~~T~v-~-~t~nP~Wne- 365 (680)
..|.|+|++|++|+.. . .||||+|.+.+ .+++|++ + ++.||+|||
T Consensus 725 ~~L~V~Visaq~L~~~----~----------------------~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe 778 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----K----------------------VGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEE 778 (885)
T ss_dssp EEEEEEEEEEESCCSS----C----------------------CCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCC
T ss_pred eEEEEEEEEeccCccc----C----------------------CCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccc
Confidence 4799999999999753 1 39999999864 2468887 4 579999999
Q ss_pred eEEEE-EecC-CCeEEEEEEEeCCCCCCCceeEEEEEecccccC
Q 005736 366 MFNMV-LHEE-TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVAD 407 (680)
Q Consensus 366 ~f~~~-v~~~-~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~ 407 (680)
+|.|. |... ...|+|+|||+| |++||++.+||..|..
T Consensus 779 ~F~F~~V~~pela~Lrf~V~D~d-----ddfiG~~~lpL~~L~~ 817 (885)
T 3ohm_B 779 PFDFPKVVLPTLASLRIAAFEEG-----GKFVGHRILPVSAIRS 817 (885)
T ss_dssp CEEEEEESCGGGCEEEEEEEETT-----TEEEEEEEEETTTCCC
T ss_pred eeEEeeEEcCCcCEEEEEEEcCC-----ccEEeeEEEEHHHcCC
Confidence 79998 6544 357999999975 7999999999999853
No 96
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.71 E-value=7.9e-08 Score=111.56 Aligned_cols=83 Identities=23% Similarity=0.311 Sum_probs=67.9
Q ss_pred CeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEcc------eeeeec-c-C-CCCCCccc
Q 005736 294 GGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEE------LTRRTD-A-R-PGSDPRWD 364 (680)
Q Consensus 294 ~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~~------~~~~T~-v-~-~t~nP~Wn 364 (680)
.|.|.|+|++|++|+.. . .||||+|.+.+ .+++|+ + + ++.||+||
T Consensus 677 ~~~L~V~Visa~~L~~~----~----------------------~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWn 730 (799)
T 2zkm_X 677 ATTLSITVISGQFLSER----S----------------------VRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWK 730 (799)
T ss_dssp CEEEEEEEEEEESCCSS----C----------------------CCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCC
T ss_pred eeeEEEEEEeccccCcc----C----------------------CCcEEEEEEEecCCCcccceeecccccCCCCCCeee
Confidence 47999999999999852 1 39999999842 357898 6 4 67999999
Q ss_pred e-eEEE-EEecC-CCeEEEEEEEeCCCCCCCceeEEEEEecccccC
Q 005736 365 S-MFNM-VLHEE-TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVAD 407 (680)
Q Consensus 365 e-~f~~-~v~~~-~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~ 407 (680)
| +|.| .|... ...|+|.|||+| |++||++.++|..|..
T Consensus 731 Ee~f~F~~v~~~el~~Lr~~V~D~d-----~d~iG~~~ipl~~L~~ 771 (799)
T 2zkm_X 731 EEPFVFEKILMPELASLRVAVMEEG-----NKFLGHRIIPINALNS 771 (799)
T ss_dssp CCCEEEEEESSGGGCEEEEEEEETT-----TEEEEEEEEEGGGBCC
T ss_pred cceEEEEEEccCCccEEEEEEEEeC-----CCccceEeeehhhcCC
Confidence 9 7999 77654 357999999975 7999999999999953
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.49 E-value=2.9e-06 Score=73.49 Aligned_cols=90 Identities=14% Similarity=0.288 Sum_probs=67.6
Q ss_pred CCeEEEEEEccee----eee-cc-CCCCCCccceeEEEEEecCCCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCce
Q 005736 338 LTTFVEIELEELT----RRT-DA-RPGSDPRWDSMFNMVLHEETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTT 411 (680)
Q Consensus 338 ~dpyv~v~~~~~~----~~T-~v-~~t~nP~Wne~f~~~v~~~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~ 411 (680)
.||||.+.+.... .+| .. ++|..|+|||+|.-.|++. ..|.|.|++.. .+++..|.+++.+|..+
T Consensus 27 lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G-r~l~i~Vfh~a-----~~fvAn~tV~~edL~~~--- 97 (126)
T 1yrk_A 27 NQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEG-RVIQIVLMRAA-----EEPVSEVTVGVSVLAER--- 97 (126)
T ss_dssp CCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTT-CEEEEEEEEET-----TEEEEEEEEEHHHHHHH---
T ss_pred CCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCC-EEEEEEEEcCC-----CCeeeEEEEEHHHHHhh---
Confidence 4999999998543 244 44 5899999999998887764 57888998743 29999999999999632
Q ss_pred eeeeCCCcchhhhhhhccCceeeeeeccCCCceeeEEEEEE
Q 005736 412 FWAIGPDSGIIAKHAEFCGDEVEMTVPFEGVNSGELTVRLV 452 (680)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~G~l~~~l~ 452 (680)
.+..+...+.|+.|+. .|.+++.+.
T Consensus 98 --------------c~~~~g~~e~WvdLeP--~Gkl~~~i~ 122 (126)
T 1yrk_A 98 --------------CKKNNGKAEFWLDLQP--QAKVLMSVQ 122 (126)
T ss_dssp --------------HHTTTTEEEEEEECBS--SCEEEEEEE
T ss_pred --------------hccCCCceEEEEeccc--CcEEEEEEE
Confidence 0112347799998876 688887664
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.38 E-value=1.5e-06 Score=76.22 Aligned_cols=91 Identities=13% Similarity=0.289 Sum_probs=68.2
Q ss_pred CCeEEEEEEcce-e---eee-cc-CCCCCCccceeEEEEEecCCCeEEEEEEEeCCCCCCCceeEEEEEecccccCCCce
Q 005736 338 LTTFVEIELEEL-T---RRT-DA-RPGSDPRWDSMFNMVLHEETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTT 411 (680)
Q Consensus 338 ~dpyv~v~~~~~-~---~~T-~v-~~t~nP~Wne~f~~~v~~~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~~~~ 411 (680)
.||||.|.+... . .+| .. ++|..|+|||+|.-.|++. ..|.|.|++. ..+++..|.+.+.+|..+
T Consensus 32 lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~G-r~l~i~Vfh~-----a~~fVAn~tV~~edL~~~--- 102 (138)
T 2enj_A 32 VNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKG-RVMQIIVKGK-----NVDLISETTVELYSLAER--- 102 (138)
T ss_dssp CCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSS-CEEEEEEECS-----SCSCCEEEEEESHHHHHH---
T ss_pred CCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECC-eEEEEEEEcC-----CCCeeeEEEEEHHHHHhh---
Confidence 499999999854 2 566 44 5799999999998877664 5688899863 239999999999999632
Q ss_pred eeeeCCCcchhhhhhhccCceeeeeeccCCCceeeEEEEEEE
Q 005736 412 FWAIGPDSGIIAKHAEFCGDEVEMTVPFEGVNSGELTVRLVL 453 (680)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~G~l~~~l~l 453 (680)
.+..+...+.|+.|+. .|.+++.+.+
T Consensus 103 --------------ck~~~g~~e~WvdLeP--~Gkl~v~i~~ 128 (138)
T 2enj_A 103 --------------CRKNNGKTEIWLELKP--QGRMLMNARY 128 (138)
T ss_dssp --------------HHHTTTCEEEEEECBS--SCEEEEEEEE
T ss_pred --------------hccCCCceEEEEeccc--CcEEEEEEEE
Confidence 0111346789998876 6899977755
No 99
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=85.10 E-value=10 Score=36.17 Aligned_cols=54 Identities=9% Similarity=-0.006 Sum_probs=40.7
Q ss_pred EEEeeecc-CCCCCeeeeEEEEEeeC---CceEEEEEEEEecCC-----CCceeEEEEEEccc
Q 005736 520 IVQRTRTA-HSPNHVWNQKFELDEIG---GGECLMVKCYNEEIF-----GDENMGSARVNLEG 573 (680)
Q Consensus 520 ~~~~T~~~-~t~nP~wne~f~f~v~~---~~~~L~i~V~d~~~~-----~d~~iG~~~i~L~~ 573 (680)
..++|.+. .+.+|.|+|++.+.++. ....|.|++++.... .+..+|.+.+||-+
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 46788888 99999999999999885 367899999876542 12466777666653
No 100
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=83.16 E-value=5.5 Score=46.69 Aligned_cols=96 Identities=20% Similarity=0.254 Sum_probs=66.5
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCE----EEeeecc-CCCCCeeeeEEEEEee--C--CceEEEEEEEEec
Q 005736 489 KINVTVVEGKDLMPKDKSGKCDPYVKLQY--GKI----VQRTRTA-HSPNHVWNQKFELDEI--G--GGECLMVKCYNEE 557 (680)
Q Consensus 489 ~L~V~I~~a~~L~~~~~~~~~dpyv~v~l--~~~----~~~T~~~-~t~nP~wne~f~f~v~--~--~~~~L~i~V~d~~ 557 (680)
.++|+|.++.++... ...+-||++.+ |++ ...|+.+ ...+|.|||.+.|.+. + ....|.|+||+..
T Consensus 218 ~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 294 (940)
T 2wxf_A 218 PFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVV 294 (940)
T ss_dssp EEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC
T ss_pred ceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEec
Confidence 799999999998653 34577887776 543 4456666 6788999999999875 2 3789999999963
Q ss_pred CC-------------CCceeEEEEEEcccccCCCeeeEEEeCCCCCCeEEEEEE
Q 005736 558 IF-------------GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGELRLQI 598 (680)
Q Consensus 558 ~~-------------~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~i~l~l 598 (680)
.. .+..+|.++++|-+... .| .+|...+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~--------~l---~~G~~~l~l 337 (940)
T 2wxf_A 295 EKAKKARSTKKKSKKADCPIAWANLMLFDYKD--------QL---KTGERCLYM 337 (940)
T ss_dssp ----------------CEEEEEEEEESBCTTS--------BB---CCEEEEEEC
T ss_pred CCccCccccccccccccceEEEEeeeEECCcC--------cc---ccCCEEEEE
Confidence 21 23488988888876432 11 257777766
No 101
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=82.41 E-value=15 Score=34.94 Aligned_cols=54 Identities=15% Similarity=0.204 Sum_probs=39.6
Q ss_pred eeeecc-CCCCCCccceeEEEEEecC---CCeEEEEEEEeCCCCC---CCceeEEEEEecc
Q 005736 350 TRRTDA-RPGSDPRWDSMFNMVLHEE---TGTVRFNLYECIPGHV---KYDYLTSCEVKMK 403 (680)
Q Consensus 350 ~~~T~v-~~t~nP~Wne~f~~~v~~~---~~~l~l~v~d~d~~~~---~d~~lG~~~i~l~ 403 (680)
..+|.+ ..+.+|.|+|++.+.+... ...|.|++++...... .+..+|.+.+||-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 456677 7899999999999988753 3479999987543211 2357898888874
No 102
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=79.38 E-value=8.7 Score=45.48 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=68.2
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CC----EEEeeeccCCCCCeeeeEEEEEee--C--CceEEEEEEEEec
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY--GK----IVQRTRTAHSPNHVWNQKFELDEI--G--GGECLMVKCYNEE 557 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l--~~----~~~~T~~~~t~nP~wne~f~f~v~--~--~~~~L~i~V~d~~ 557 (680)
..++|+|..+.++.... ....+-||++.+ |+ ...+|+.+...+|.|||..+|.+. + ....|.|+||+..
T Consensus 355 ~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~~ 433 (1091)
T 3hhm_A 355 SALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSVK 433 (1091)
T ss_dssp SEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCCTTSCEEEEEEEEEEEGGGCCTTCEEEEEECCCC
T ss_pred CCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccCCCCCCCCeeEEecCccccCChhcEEEEEEEEec
Confidence 47999999999886432 334677888887 54 345565554457889999999875 2 4789999999865
Q ss_pred CC-----CCceeEEEEEEcccccCCCeeeEEEeCCCCCCeEEEEEE
Q 005736 558 IF-----GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGELRLQI 598 (680)
Q Consensus 558 ~~-----~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~i~l~l 598 (680)
.. ....||.++++|-+... .| .+|...+.+
T Consensus 434 ~~~~~~~~~~~lg~~n~~lfd~~~--------~L---~~G~~~L~l 468 (1091)
T 3hhm_A 434 GRKGAKEEHCPLAWGNINLFDYTD--------TL---VSGKMALNL 468 (1091)
T ss_dssp CCC-------CCEEEEEESBCTTC--------BB---CCEEEEEEC
T ss_pred CccCcccccceeEEeeeeeEccCC--------eE---EcCCeEEEe
Confidence 42 23579999999887432 11 257777766
No 103
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=78.63 E-value=16 Score=32.84 Aligned_cols=115 Identities=10% Similarity=0.077 Sum_probs=72.7
Q ss_pred CCcEEEEEEEEeecCCCCC--CCCCCCc--EEEEEE-CCEEEeeeccCCCCCeeeeEEEEEeeCC--------ceEEEEE
Q 005736 486 TGRKINVTVVEGKDLMPKD--KSGKCDP--YVKLQY-GKIVQRTRTAHSPNHVWNQKFELDEIGG--------GECLMVK 552 (680)
Q Consensus 486 ~~~~L~V~I~~a~~L~~~~--~~~~~dp--yv~v~l-~~~~~~T~~~~t~nP~wne~f~f~v~~~--------~~~L~i~ 552 (680)
..+.+.++|.++. +.+.- ..+..+| ||.+.+ +-+.+.|.+....+|.+|-+-.|.+... ...+.++
T Consensus 16 gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lE 94 (156)
T 2yrb_A 16 GENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTITLE 94 (156)
T ss_dssp SCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEECCSHHHHHHHHHCCEEEE
T ss_pred CCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEEEeCHHHHHHHhcCCEEEE
Confidence 3458999999886 22110 0122345 455544 4466666666788999999988887632 3478899
Q ss_pred EEEecCCCCceeEEEEEEcccccCCCe-eeEEEeCCCC-----CCeEEEEEEEEE
Q 005736 553 CYNEEIFGDENMGSARVNLEGLVEGSV-RDIWVPLEKV-----NTGELRLQIEAT 601 (680)
Q Consensus 553 V~d~~~~~d~~iG~~~i~L~~l~~~~~-~~~w~~L~~~-----~~G~i~l~l~~~ 601 (680)
+.......-..||.+.|+|.++.+.+. ...-.+|.+. .-|.|...+++.
T Consensus 95 Lhqa~g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~ 149 (156)
T 2yrb_A 95 VHQAYSTEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLR 149 (156)
T ss_dssp EEEECSSCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEE
T ss_pred EEEeeCCCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEe
Confidence 988754455689999999999874332 2223344432 236666666554
No 104
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=70.30 E-value=17 Score=32.64 Aligned_cols=94 Identities=15% Similarity=0.292 Sum_probs=63.3
Q ss_pred CeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEEc-ceeeeeccCCCCCCccceeEEEEEe
Q 005736 294 GGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE-ELTRRTDARPGSDPRWDSMFNMVLH 372 (680)
Q Consensus 294 ~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~~-~~~~~T~v~~t~nP~Wne~f~~~v~ 372 (680)
.+.+.|+|.++.- .+... . ..+|..+--||...+- -+...|.+-.+.+|.+|.+-.+.|.
T Consensus 17 EnlfEihi~~~~~-~~~~l-~-----------------~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V~ 77 (156)
T 2yrb_A 17 ENLFEIHINKVTF-SSEVL-Q-----------------ASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVH 77 (156)
T ss_dssp CEEEEEEEEEECC-CHHHH-H-----------------HHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEEC
T ss_pred CcEEEEEEeEEEE-cHHHH-h-----------------hccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEEE
Confidence 5899999998862 21111 0 0112222235555443 4567777867999999999888876
Q ss_pred c--------CCCeEEEEEEEeCCCCCCCceeEEEEEecccccCC
Q 005736 373 E--------ETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADD 408 (680)
Q Consensus 373 ~--------~~~~l~l~v~d~d~~~~~d~~lG~~~i~l~~l~~~ 408 (680)
- .+..+.++++.... ..-+.||++.|+|.++.++
T Consensus 78 ~d~~fl~yL~~~~l~lELhqa~g--~~~~tla~~~I~l~~lLe~ 119 (156)
T 2yrb_A 78 VNDLFLQYIQKNTITLEVHQAYS--TEYETIAACQLKFHEILEK 119 (156)
T ss_dssp CSHHHHHHHHHCCEEEEEEEECS--SCEEEEEEEEECCSHHHHC
T ss_pred eCHHHHHHHhcCCEEEEEEEeeC--CCceEEEEEEEEhHHhhCc
Confidence 3 14579999988643 4668999999999998754
No 105
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=69.95 E-value=15 Score=43.40 Aligned_cols=90 Identities=11% Similarity=0.159 Sum_probs=59.0
Q ss_pred cCeEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCCCeEEEEEE--cc----eeeeeccCCCCCCcccee
Q 005736 293 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIEL--EE----LTRRTDARPGSDPRWDSM 366 (680)
Q Consensus 293 ~~G~L~V~v~~a~~L~~~d~~g~~~~~~~~~~s~~~~~~~~~d~~~dpyv~v~~--~~----~~~~T~v~~t~nP~Wne~ 366 (680)
...-++|+|.++.++..... . ..+-||.+.+ |+ ...+|+.....+|.|||.
T Consensus 353 ~~~~f~v~i~~~~~~n~~~~-~----------------------~~~~~V~~~l~hG~~~L~~~~~T~~~~~~~~~Wne~ 409 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVNIR-D----------------------IDKIYVRTGIYHGGEPLCDNVNTQRVPCSNPRWNEW 409 (1091)
T ss_dssp CCSEEEEEEEEESCCCCCCS-S----------------------CCCCCEEEEEESSSCSSCCEECCCCCCTTSCEEEEE
T ss_pred CCCCEEEEEEEecCCCCCcc-c----------------------cceEEEEEEEEECCEEccCceeccccCCCCCCCCee
Confidence 34688999999988764321 1 1256777766 32 244555555678889999
Q ss_pred EEEEEe--cC--CCeEEEEEEEeCCCCC---CCceeEEEEEecccc
Q 005736 367 FNMVLH--EE--TGTVRFNLYECIPGHV---KYDYLTSCEVKMKYV 405 (680)
Q Consensus 367 f~~~v~--~~--~~~l~l~v~d~d~~~~---~d~~lG~~~i~l~~l 405 (680)
..|.+. +. ...|.|.||+...... ....||.+.++|=+-
T Consensus 410 l~f~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 410 LNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp EEEEEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESBCT
T ss_pred EEecCccccCChhcEEEEEEEEecCccCcccccceeEEeeeeeEcc
Confidence 999876 32 5679999998654211 345799999988553
No 106
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=66.86 E-value=29 Score=40.75 Aligned_cols=98 Identities=17% Similarity=0.162 Sum_probs=63.0
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCE---EEeeecc-CCCCCeeeeEEEEEee--C--CceEEEEEEEEecC
Q 005736 489 KINVTVVEGKDLMPKDKSGKCDPYVKLQY--GKI---VQRTRTA-HSPNHVWNQKFELDEI--G--GGECLMVKCYNEEI 558 (680)
Q Consensus 489 ~L~V~I~~a~~L~~~~~~~~~dpyv~v~l--~~~---~~~T~~~-~t~nP~wne~f~f~v~--~--~~~~L~i~V~d~~~ 558 (680)
.++|.|..+....... ....+-||++.+ |++ ..+|..+ -+.+|.|||.+.|.+. + ....|.|+||+...
T Consensus 219 ~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~ 297 (961)
T 1e7u_A 219 KFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAK 297 (961)
T ss_dssp EEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC
T ss_pred ceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEeccc
Confidence 7899999886522111 234567777666 553 2345555 6778999999999865 2 37899999998532
Q ss_pred C-----------------CCceeEEEEEEcccccCCCeeeEEEeCCCCCCeEEEEEE
Q 005736 559 F-----------------GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGELRLQI 598 (680)
Q Consensus 559 ~-----------------~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~i~l~l 598 (680)
. ....+|.++++|-+... .| .+|...+.+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~--------~l---~~G~~~L~l 343 (961)
T 1e7u_A 298 PALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRF--------LL---RHGEYVLHM 343 (961)
T ss_dssp --------------------CEEEEEEEESBCTTS--------BB---CCEEEEEEC
T ss_pred CccccccccccccccccccceeEEEEeeeeecCCC--------cc---ccCCEEEEE
Confidence 1 23478888888876432 11 257777765
No 107
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=58.61 E-value=7.4 Score=46.24 Aligned_cols=66 Identities=20% Similarity=0.301 Sum_probs=49.3
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCE----EEeeecc-CCCCCeeeeEEEEEeeC----CceEEEEEEEEe
Q 005736 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY--GKI----VQRTRTA-HSPNHVWNQKFELDEIG----GGECLMVKCYNE 556 (680)
Q Consensus 488 ~~L~V~I~~a~~L~~~~~~~~~dpyv~v~l--~~~----~~~T~~~-~t~nP~wne~f~f~v~~----~~~~L~i~V~d~ 556 (680)
..++|+|..+.++... ...+-||++.+ |++ ..+|+.+ ...+|.|||.+.|.+.- ....|.|+||+.
T Consensus 353 ~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp SEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred CCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEe
Confidence 4799999999998653 34567776555 653 3446556 67889999999998652 378999999986
No 108
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=38.99 E-value=31 Score=40.38 Aligned_cols=56 Identities=13% Similarity=0.069 Sum_probs=40.9
Q ss_pred CceEEEEEEEeecCccccCCCCCCCEEEEEE--CCe----EEeeeeeecCCCCcccceeEEEecC
Q 005736 618 NGWIELVIVEARDLVAADLRGTSDPYVKVQY--GDL----KKRTKLTVACLSGHIQNSKSSMASN 676 (680)
Q Consensus 618 ~~~L~V~I~~a~~L~~~d~~g~~DPyV~v~l--g~~----~~kT~~~k~tlnP~wnE~f~f~V~n 676 (680)
...++|.|..+.++... ..++-||++.+ |++ ...|+.+.-..+|.|||-++|++.=
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i 277 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISV 277 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEG
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEccccc
Confidence 36799999999998643 35678888877 553 4556666667889999999998753
No 109
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=35.36 E-value=83 Score=36.92 Aligned_cols=67 Identities=16% Similarity=0.229 Sum_probs=41.6
Q ss_pred CeEEEEEE--ccee---eeecc-CCCCCCccceeEEEEEe--cC--CCeEEEEEEEeCCCC---------------CCCc
Q 005736 339 TTFVEIEL--EELT---RRTDA-RPGSDPRWDSMFNMVLH--EE--TGTVRFNLYECIPGH---------------VKYD 393 (680)
Q Consensus 339 dpyv~v~~--~~~~---~~T~v-~~t~nP~Wne~f~~~v~--~~--~~~l~l~v~d~d~~~---------------~~d~ 393 (680)
+-||++.+ |+.. .+|.. .-+.+|.|||.++|.+. +. ...|.|++|+..... .+..
T Consensus 239 ~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (961)
T 1e7u_A 239 TVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKAQ 318 (961)
T ss_dssp EEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC--------------------C
T ss_pred eEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecccCccccccccccccccccccce
Confidence 66877655 4321 22332 24667999999988765 32 567999999854221 1345
Q ss_pred eeEEEEEecccc
Q 005736 394 YLTSCEVKMKYV 405 (680)
Q Consensus 394 ~lG~~~i~l~~l 405 (680)
.+|.+.++|=+-
T Consensus 319 ~lg~~n~~lfd~ 330 (961)
T 1e7u_A 319 LLYYVNLLLIDH 330 (961)
T ss_dssp EEEEEEEESBCT
T ss_pred eEEEEeeeeecC
Confidence 789998887543
No 110
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=26.53 E-value=33 Score=40.81 Aligned_cols=59 Identities=10% Similarity=-0.015 Sum_probs=42.7
Q ss_pred CceEEEEEEEeecCccccCCCCCCCEEEEEE--CCe----EEeeeeeecCCCCcccceeEEEecCCCC
Q 005736 618 NGWIELVIVEARDLVAADLRGTSDPYVKVQY--GDL----KKRTKLTVACLSGHIQNSKSSMASNLRV 679 (680)
Q Consensus 618 ~~~L~V~I~~a~~L~~~d~~g~~DPyV~v~l--g~~----~~kT~~~k~tlnP~wnE~f~f~V~n~~~ 679 (680)
...++|.|..+.++... ..++-||++.+ |++ ...|+.+.-..+|.|||-++|++.=...
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dL 416 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDL 416 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccC
Confidence 36799999999998643 45678888655 653 3456555557889999999998754433
No 111
>2obd_A Cholesteryl ester transfer protein; lipid transfer protein, lipid transport; HET: NDG FU4 2OB PCW EPE 1PE PG4; 2.10A {Homo sapiens}
Probab=25.29 E-value=6.2e+02 Score=26.66 Aligned_cols=19 Identities=5% Similarity=0.179 Sum_probs=16.5
Q ss_pred eeeEEEEE-eEEEEEEEEEe
Q 005736 199 GTAKIVIN-SLHIKGDLLVM 217 (680)
Q Consensus 199 g~~~v~v~-~~~~~g~~Rv~ 217 (680)
|.+.+.++ ++.+.+.+|+.
T Consensus 111 G~~~~~v~~gv~i~~~~~L~ 130 (476)
T 2obd_A 111 QSIDFEIDSAIDLQINTQLT 130 (476)
T ss_dssp EEEEEEEEEEEEEEEEEEEE
T ss_pred eEEEEEEecCEEEEEEEEEe
Confidence 57888999 99999999984
Done!