Your job contains 1 sequence.
>005738
MDTIGFFPFPILCSLIVFLTCFTFSQISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKST
PRSTNETNDDFTQSPVNGSPDKRNLSQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIP
VTYENEVNWYQELMRFAPTALLFGALWFMGRKMQSGLGVGGPGGRGGRGIFNIGKATITK
MDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTL
LAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIGRAR
GRGGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITI
DKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNES
AQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV
PRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKM
TYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIE
EHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGFLEDDKESKETKE
GGTAEDDNSSSPLEPEVVPT
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005738
(680 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 2638 2.1e-274 1
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 2618 2.8e-272 1
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 1557 1.9e-164 2
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 1596 5.5e-164 1
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 1551 8.3e-164 2
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 1541 3.6e-163 2
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 1540 4.6e-163 2
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 1540 1.2e-162 2
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 1538 1.2e-162 2
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 1535 1.2e-162 2
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 1535 2.5e-162 2
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 1534 3.2e-162 2
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 1520 1.1e-161 2
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 1512 3.6e-161 2
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 1567 6.5e-161 1
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 1522 9.6e-161 2
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 1520 2.0e-160 2
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 892 1.3e-158 2
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 892 1.3e-158 2
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 1498 8.8e-158 2
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 1496 1.8e-157 2
WB|WBGene00004978 - symbol:spg-7 species:6239 "Caenorhabd... 1465 1.6e-156 2
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 1477 3.9e-155 2
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 1501 6.5e-154 1
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 1469 1.6e-150 1
ZFIN|ZDB-GENE-030131-5391 - symbol:spg7 "spastic parapleg... 1314 4.2e-134 1
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 1304 4.8e-133 1
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 1304 4.8e-133 1
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 1303 6.2e-133 1
UNIPROTKB|E2R4F3 - symbol:SPG7 "Uncharacterized protein" ... 1287 3.1e-131 1
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 1278 2.8e-130 1
MGI|MGI:2385906 - symbol:Spg7 "spastic paraplegia 7 homol... 1278 2.8e-130 1
UNIPROTKB|A7E2Z6 - symbol:SPG7 "SPG7 protein" species:991... 1275 5.7e-130 1
RGD|727940 - symbol:Spg7 "spastic paraplegia 7 homolog (h... 722 4.7e-118 2
UNIPROTKB|Q7TT47 - symbol:Spg7 "Paraplegin" species:10116... 722 4.7e-118 2
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 1136 3.1e-115 1
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 1120 1.5e-113 1
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 1120 1.5e-113 1
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 1117 3.2e-113 1
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 1108 2.9e-112 1
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 1069 3.4e-111 2
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 1082 1.6e-109 1
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 1057 7.2e-107 1
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 1057 7.2e-107 1
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 1054 1.5e-106 1
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 1054 1.5e-106 1
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 1054 1.5e-106 1
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 1052 2.5e-106 1
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 1049 5.1e-106 1
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 1043 2.2e-105 1
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 1041 3.6e-105 1
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 1041 3.6e-105 1
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 1040 4.6e-105 1
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 1035 1.6e-104 1
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 1034 2.0e-104 1
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 1033 2.5e-104 1
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 1017 1.3e-102 1
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 1015 2.0e-102 1
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 1009 8.8e-102 1
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 1009 8.8e-102 1
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 998 1.3e-100 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 979 1.3e-98 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 943 8.7e-95 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 943 8.7e-95 1
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 917 5.4e-94 2
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 927 4.3e-93 1
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 899 4.8e-93 2
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 900 6.2e-93 2
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 925 7.0e-93 1
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 906 7.9e-93 2
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 906 7.3e-91 1
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 903 1.5e-90 1
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 884 1.7e-90 2
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 898 5.1e-90 1
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 895 1.1e-89 1
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 891 2.8e-89 1
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 891 2.8e-89 1
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 886 9.6e-89 1
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 886 9.6e-89 1
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 884 1.6e-88 1
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 883 2.0e-88 1
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 880 4.1e-88 1
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 874 1.8e-87 1
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 870 4.7e-87 1
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 848 1.0e-84 1
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 845 2.1e-84 1
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 842 4.4e-84 1
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 821 7.4e-82 1
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 793 6.8e-79 1
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 793 6.8e-79 1
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 650 6.8e-67 2
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 646 2.6e-63 1
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 622 8.8e-63 2
TAIR|locus:2138146 - symbol:FtsHi1 "FTSH inactive proteas... 642 1.5e-62 1
TIGR_CMR|CPS_1798 - symbol:CPS_1798 "ATP-dependent peptid... 629 2.0e-61 2
TIGR_CMR|CPS_1795 - symbol:CPS_1795 "ATP-dependent peptid... 621 1.6e-59 1
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 575 1.9e-55 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 540 1.1e-54 2
WB|WBGene00021615 - symbol:Y47C4A.1 species:6239 "Caenorh... 510 6.7e-49 1
WB|WBGene00022429 - symbol:Y108F1.1 species:6239 "Caenorh... 510 6.7e-49 1
WARNING: Descriptions of 613 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 2638 (933.7 bits), Expect = 2.1e-274, P = 2.1e-274
Identities = 522/676 (77%), Positives = 574/676 (84%)
Query: 10 PILCSLIVFLTCFTFS-----QISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRST 64
P+L +L VF + F+F QISFQEFKNKLLEPGLVD I V+NKSVAKV+V+STP+
Sbjct: 138 PLL-ALAVFFSTFSFGSGEQQQISFQEFKNKLLEPGLVDHIDVSNKSVAKVYVRSTPKDQ 196
Query: 65 NETNDDFTQSPVNGSPDKRNLSQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYE 124
T D NG P KR Q KYYFNIGSV+SFEEKLEEAQEALG+D H+Y+PVTY
Sbjct: 197 QTT--DVVHGNGNGIPAKRTGGQYKYYFNIGSVDSFEEKLEEAQEALGVDRHEYVPVTYV 254
Query: 125 NEVNWYQELMRFAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMN 184
+E+ WYQE MRFAPT LL G L + R+MQ IFNIGKATIT+ D +
Sbjct: 255 SEMVWYQEFMRFAPTLLLLGTLIYGARRMQGGLGVGGTGGKNGRGIFNIGKATITRADKH 314
Query: 185 AKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKA 244
+K+K++FKDVAGCDEAKQEIMEFVHFLKNPKKYE+LGAKIPKGALLVGPPGTGKTLLAKA
Sbjct: 315 SKNKIYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKA 374
Query: 245 TAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXX 304
TAGESGVPFLS+SGSDFMEMFVGVGPSRVR LFQEARQ APSI+FIDEIDAI
Sbjct: 375 TAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGG 434
Query: 305 XXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPD 364
NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPD
Sbjct: 435 LGG-NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPD 493
Query: 365 IKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQIT 424
IKGRDQIF+IYLKK+KLD+EPS+YSQRLAALTPGFAGADIANVCNEAALIAAR+E A +T
Sbjct: 494 IKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVT 553
Query: 425 MQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGT 484
M HFE+AIDRVIGGLEKKN+VISKLERRTVAYHESGHAV GWFLEHAEPLLKVTIVPRGT
Sbjct: 554 MAHFESAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGT 613
Query: 485 AALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQ 544
AALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVL+GKISTGAQNDLEKVTKMTYAQ
Sbjct: 614 AALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGKISTGAQNDLEKVTKMTYAQ 673
Query: 545 VAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHRE 604
VAVYGFSDKVGLLSFP RDD ++ +KPYS+KTGAIID EVR+WV KAY+ TV+L+EEH+
Sbjct: 674 VAVYGFSDKVGLLSFPPRDDGYDFSKPYSNKTGAIIDEEVRDWVAKAYERTVELVEEHKV 733
Query: 605 HVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGFLEDDKESKETKEGGTA 664
VA+IAE LLEKEVLHQDDL+++LGERPFK +E TNYDRFK GF E +K+S T
Sbjct: 734 KVAEIAELLLEKEVLHQDDLLKILGERPFKSAEVTNYDRFKSGFEETEKDSAATPTVEPV 793
Query: 665 EDDNSSSPLEPEVVPT 680
DD + P EP+VVPT
Sbjct: 794 VDDGAPPPFEPQVVPT 809
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 2618 (926.6 bits), Expect = 2.8e-272, P = 2.8e-272
Identities = 518/657 (78%), Positives = 567/657 (86%)
Query: 26 QISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNETNDDFTQSPVNGSPDKRNL 85
QISFQEFKNKLLE GLVD I V+NK VAKV+V+S+P+S +T ++ Q P NG P K
Sbjct: 162 QISFQEFKNKLLEAGLVDHIDVSNKEVAKVYVRSSPKS--QTTEEVVQGPGNGVPAKGRG 219
Query: 86 SQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGA 145
Q KYYFNIGSVESFEEKLEEAQEA+G++ HD++PVTY +E WYQEL+RFAPT LL
Sbjct: 220 GQYKYYFNIGSVESFEEKLEEAQEAIGVNSHDFVPVTYVSETIWYQELLRFAPTLLLVAT 279
Query: 146 LWFMGRKMQSXXXXXXX-XXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEI 204
L F R+MQ IFNIGKA IT+ D N+K+K++FKDVAGC+EAKQEI
Sbjct: 280 LIFGARRMQGGLGGLGGPGGKAGRGIFNIGKAQITRADKNSKNKIYFKDVAGCEEAKQEI 339
Query: 205 MEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEM 264
MEFVHFL+NPKKYE+LGAKIPKGALLVGPPGTGKTLLAKATAGES VPFLS+SGSDFMEM
Sbjct: 340 MEFVHFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEM 399
Query: 265 FVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMD 324
FVGVGPSRVR+LFQEARQCAPSI+FIDEIDAI NDERESTLNQLLVEMD
Sbjct: 400 FVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGGNDERESTLNQLLVEMD 459
Query: 325 GFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNE 384
GFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKK+KLD+E
Sbjct: 460 GFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHE 519
Query: 385 PSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNK 444
PS+YSQRLAALTPGFAGADIANVCNEAALIAAR+E A +TM HF++AIDRVIGGLEKKN+
Sbjct: 520 PSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFDSAIDRVIGGLEKKNR 579
Query: 445 VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQ 504
VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQ
Sbjct: 580 VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQ 639
Query: 505 LFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDD 564
LFDMTCMTLGGRAAEQVL+G+ISTGAQNDLEKVTKMTYAQVAVYGFSDK+GLLSFPQR+D
Sbjct: 640 LFDMTCMTLGGRAAEQVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKIGLLSFPQRED 699
Query: 565 TFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDL 624
F +KPYS++TGA+ID EVREWVGKAY TV+LIEEH+E VAQIAE LLEKEVLHQDDL
Sbjct: 700 EF--SKPYSNRTGAMIDEEVREWVGKAYKRTVELIEEHKEQVAQIAELLLEKEVLHQDDL 757
Query: 625 VRVLGERPFKHSEPTNYDRFKKGFLEDDKES-KETKEGGTAEDDNSSSPLEPEVVPT 680
+VLGERPFK E TNYDRFK GF E +KES KE+ EDD PLEP+VVPT
Sbjct: 758 TKVLGERPFKSGETTNYDRFKSGFEESEKESQKESVPVKPVEDDGIP-PLEPQVVPT 813
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 1557 (553.2 bits), Expect = 1.9e-164, Sum P(2) = 1.9e-164
Identities = 324/595 (54%), Positives = 422/595 (70%)
Query: 91 YFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFMG 150
+FNIGSV++FE LE Q+ LGI+ + +PV Y E + L+ PT L+ G+L +
Sbjct: 213 WFNIGSVDTFERNLETVQQDLGIEVENRLPVVYSTESDG-SFLLSLLPTILIIGSLLYTL 271
Query: 151 RKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF 210
R+ + +F++G+ T K+ + D V FKDVAGC+EAK EIMEFV+F
Sbjct: 272 RRGPAGLGRGGRGMGG---LFSVGETT-AKVLKDEID-VKFKDVAGCEEAKLEIMEFVNF 326
Query: 211 LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGP 270
LKNPK+YE+LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF++++GS+F+EMFVGVGP
Sbjct: 327 LKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGP 386
Query: 271 SRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTA 330
+RVR LF AR+ AP I+FIDEIDA+ + E+E+TLNQLLVEMDGF TT
Sbjct: 387 ARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENTLNQLLVEMDGFNTTT 445
Query: 331 GVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDN--EPSFY 388
VV+LAGTNRPDILD AL+RPGRFDRQI I PDIKGR IF+++L+ LKLD +
Sbjct: 446 NVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNL 505
Query: 389 SQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISK 448
+++LA+LTPGF+GADIANVCNEAALIAAR+ S I +HFE AI+RVIGGLEKK +V+
Sbjct: 506 ARKLASLTPGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVIGGLEKKTQVLQP 565
Query: 449 LERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDM 508
E++TVAYHE+GHAVAGWFLEHA+PLLKV+I+PRG LG+AQY+P E L TKEQL D
Sbjct: 566 EEKKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGKG-LGYAQYLPKEQYLYTKEQLLDR 624
Query: 509 TCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSF--PQRDDTF 566
CMTLGGR +EQ+ G+I+TGAQ+DL+KVT+ YAQ+ +G ++KVG +SF P++ D
Sbjct: 625 MCMTLGGRVSEQIFFGRITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMV 684
Query: 567 EMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVR 626
+ KPYS T +ID EVR + AYD T+ L+ E + V ++A LLEKEVL + D+V
Sbjct: 685 -LEKPYSEATARMIDEEVRSLINIAYDRTLSLLTEKKAEVEKVALRLLEKEVLDKSDMVD 743
Query: 627 VLGERPFKHSEPTNYDRFKKGF--LEDDKESKE-TKEGGTAEDDNSSSPLEPEVV 678
+LG RPF +E + Y+ F +G L++D E K+ + + EVV
Sbjct: 744 LLGPRPF--AEKSTYEEFVEGTGSLDEDTSLPEGLKDWNKKREKEKEETTDEEVV 796
Score = 65 (27.9 bits), Expect = 1.9e-164, Sum P(2) = 1.9e-164
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 26 QISFQEFKNKLLEPGLVDRIVVTNKSVAKV-FV 57
+I++++F N L G+VDR+ V NK +V FV
Sbjct: 170 EITWKDFVNNYLSKGVVDRLEVVNKRFVRVIFV 202
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 1596 (566.9 bits), Expect = 5.5e-164, P = 5.5e-164
Identities = 320/557 (57%), Positives = 407/557 (73%)
Query: 92 FNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFMGR 151
F IG + FEE++E+ Q LGI +IP++Y + L++ P A++ G L F R
Sbjct: 215 FKIGDKKVFEEQVEKVQSDLGIPKSQFIPISYHEYFDPRVALIQVIPYAII-GYLIF--R 271
Query: 152 KMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFL 211
+S +F+ GK+T K + + V F DVAG EAK EI EFV+FL
Sbjct: 272 TFRSIKSNK---------MFSQGKSTANKFEKSTST-VKFSDVAGLGEAKVEIEEFVNFL 321
Query: 212 KNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPS 271
KNPKK+ ++GAKIP+GA+LVGPPGTGKTL+AKATAGE+ VPF S SGSDF+EMFVGVGPS
Sbjct: 322 KNPKKFHDIGAKIPRGAILVGPPGTGKTLIAKATAGEANVPFYSTSGSDFVEMFVGVGPS 381
Query: 272 RVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAG 331
RVR LF++AR+ AP IVFIDEIDA+ NDERE+TLNQLLVEMDGF
Sbjct: 382 RVRDLFEQARKNAPCIVFIDEIDAVGRARGKGGFSGSNDERENTLNQLLVEMDGFKPLKN 441
Query: 332 VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQR 391
VVVLA TNRPDILDKALLRPGRFDRQITID PD+K R++IF+++L L LD + Y++R
Sbjct: 442 VVVLAATNRPDILDKALLRPGRFDRQITIDNPDLKSREEIFRVHLAALLLDKSIN-YAER 500
Query: 392 LAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLER 451
L+ LTPGF+GADIANVCNEAALIAAR + IT++HF+AA+DRVIGGLEKKNKV+S E+
Sbjct: 501 LSKLTPGFSGADIANVCNEAALIAARRHAEIITLEHFDAAVDRVIGGLEKKNKVLSPTEK 560
Query: 452 RTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCM 511
RTVAYHE+GHAV WFL+H PLLKV+IVPRG AALG+AQY+P E L +EQ+FDM CM
Sbjct: 561 RTVAYHEAGHAVVSWFLKHCHPLLKVSIVPRGVAALGYAQYLPKEQFLQNQEQIFDMMCM 620
Query: 512 TLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEMTKP 571
LGGR AEQ+ G I+TGAQ+DLEK+TKM Y+QV++YG ++K+G LS+ + D ++TKP
Sbjct: 621 ALGGRVAEQLTFGTITTGAQDDLEKITKMAYSQVSIYGMNEKIGPLSYQKGQDGSDLTKP 680
Query: 572 YSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVLGER 631
YS +T ++D EVR+ + AYD T ++++EHRE + +A LLEKEV+H +++ VLG R
Sbjct: 681 YSEETAEVMDEEVRKLLKSAYDRTTQVLQEHREGLISVANLLLEKEVIHFEEVEAVLGPR 740
Query: 632 PF--KHSEPTNYDRFKK 646
PF K EP N + K
Sbjct: 741 PFNNKTEEPKNINNQPK 757
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 1551 (551.0 bits), Expect = 8.3e-164, Sum P(2) = 8.3e-164
Identities = 320/573 (55%), Positives = 415/573 (72%)
Query: 91 YFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFMG 150
+FNIGSV++FE LE Q+ LGI+ + +PV Y E + L+ PT L+ G+L +
Sbjct: 57 WFNIGSVDTFERNLETVQQDLGIEVENRLPVVYSTESDG-SFLLSLLPTILIIGSLLYTL 115
Query: 151 RKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF 210
R+ + +F++G+ T K+ + D V FKDVAGC+EAK EIMEFV+F
Sbjct: 116 RRGPAGLGRGGRGMGG---LFSVGETT-AKVLKDEID-VKFKDVAGCEEAKLEIMEFVNF 170
Query: 211 LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGP 270
LKNPK+YE+LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF++++GS+F+EMFVGVGP
Sbjct: 171 LKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGP 230
Query: 271 SRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTA 330
+RVR LF AR+ AP I+FIDEIDA+ + E+E+TLNQLLVEMDGF TT
Sbjct: 231 ARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENTLNQLLVEMDGFNTTT 289
Query: 331 GVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDN--EPSFY 388
VV+LAGTNRPDILD AL+RPGRFDRQI I PDIKGR IF+++L+ LKLD +
Sbjct: 290 NVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNL 349
Query: 389 SQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISK 448
+++LA+LTPGF+GADIANVCNEAALIAAR+ S I +HFE AI+RVIGGLEKK +V+
Sbjct: 350 ARKLASLTPGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVIGGLEKKTQVLQP 409
Query: 449 LERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDM 508
E++TVAYHE+GHAVAGWFLEHA+PLLKV+I+PRG LG+AQY+P E L TKEQL D
Sbjct: 410 EEKKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGKG-LGYAQYLPKEQYLYTKEQLLDR 468
Query: 509 TCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSF--PQRDDTF 566
CMTLGGR +EQ+ G+I+TGAQ+DL+KVT+ YAQ+ +G ++KVG +SF P++ D
Sbjct: 469 MCMTLGGRVSEQIFFGRITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMV 528
Query: 567 EMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVR 626
+ KPYS T +ID EVR + AYD T+ L+ E + V ++A LLEKEVL + D+V
Sbjct: 529 -LEKPYSEATARMIDEEVRSLINIAYDRTLSLLTEKKAEVEKVALRLLEKEVLDKSDMVD 587
Query: 627 VLGERPFKHSEPTNYDRFKKGF--LEDDKESKE 657
+LG RPF +E + Y+ F +G L++D E
Sbjct: 588 LLGPRPF--AEKSTYEEFVEGTGSLDEDTSLPE 618
Score = 65 (27.9 bits), Expect = 8.3e-164, Sum P(2) = 8.3e-164
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 26 QISFQEFKNKLLEPGLVDRIVVTNKSVAKV-FV 57
+I++++F N L G+VDR+ V NK +V FV
Sbjct: 15 EITWKDFVNNYLSKGVVDRLEVVNKRFVRVIFV 47
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 1541 (547.5 bits), Expect = 3.6e-163, Sum P(2) = 3.6e-163
Identities = 322/603 (53%), Positives = 424/603 (70%)
Query: 76 VNGSPDKRNLSQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMR 135
V +P K + +FNIGSV++FE LE Q+ LGI+ + +PV Y E + L+
Sbjct: 199 VTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG-SFLLS 257
Query: 136 FAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVA 195
PT L+ L + R+ + +F++G+ T K+ + D V FKDVA
Sbjct: 258 MLPTVLIIAFLLYTIRRGPAGIGRTGRGMGG---LFSVGETT-AKVLKDEID-VKFKDVA 312
Query: 196 GCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLS 255
GC+EAK EIMEFV+FLKNPK+Y++LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF++
Sbjct: 313 GCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFIT 372
Query: 256 MSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDEREST 315
+SGS+F+EMFVGVGP+RVR LF AR+ AP I+FIDEIDA+ + E+E+T
Sbjct: 373 VSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENT 431
Query: 316 LNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIY 375
LNQLLVEMDGF TT VV+LAGTNRPDILD AL+RPGRFDRQI I PDIKGR IF+++
Sbjct: 432 LNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVH 491
Query: 376 LKKLKLDN--EPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAID 433
L+ LKLD+ E +++LA+LTPGF+GAD+ANVCNEAALIAAR+ S I +HFE AI+
Sbjct: 492 LRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIE 551
Query: 434 RVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYV 493
RVIGGLEKK +V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY+
Sbjct: 552 RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQYL 610
Query: 494 PNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDK 553
P E L T+EQL D CMTLGGR +E++ G+I+TGAQ+DL KVT+ YAQ+ +G ++K
Sbjct: 611 PREQYLYTREQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEK 670
Query: 554 VGLLSF--PQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAE 611
VG +SF P++ D + KPYS T +ID+EVR + AY TV L+ E + V ++A
Sbjct: 671 VGQISFDLPRQGDMV-LEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVAL 729
Query: 612 ELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGF--LEDDKESKETKEGGTAEDDNS 669
LLEKEVL ++D+V +LG RPF +E + Y+ F +G L++D E + E + S
Sbjct: 730 LLLEKEVLDKNDMVELLGPRPF--AEKSTYEEFVEGTGSLDEDTSLPEGLKDWNREREGS 787
Query: 670 SSP 672
P
Sbjct: 788 EEP 790
Score = 69 (29.3 bits), Expect = 3.6e-163, Sum P(2) = 3.6e-163
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 15 LIVFLTCFTFSQISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRST 64
L FL + +I++++F N L G+VDR+ V NK +V TP T
Sbjct: 159 LFYFLFKSSGREITWKDFANNYLSKGVVDRLEVVNKRFVRVTF--TPGKT 206
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 1540 (547.2 bits), Expect = 4.6e-163, Sum P(2) = 4.6e-163
Identities = 321/609 (52%), Positives = 428/609 (70%)
Query: 79 SPDKRNLSQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAP 138
+P K + +FNIGSV++FE LE AQ LGI+ + +PV Y E + L+ P
Sbjct: 196 TPGKTPVDGQYVWFNIGSVDTFERNLETAQLELGIEGENRLPVVYSAESDG-SFLLSMLP 254
Query: 139 TALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCD 198
T L+ G L FM R+ + +F++ + T K+ + D V FKDVAGC+
Sbjct: 255 TVLIIGFLLFMLRRGPAGAGRPGRGMGG---LFSVSETT-AKVLRDEID-VKFKDVAGCE 309
Query: 199 EAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSG 258
EAK EIMEFV+FLKNPK+Y++LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF++++G
Sbjct: 310 EAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNG 369
Query: 259 SDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQ 318
S+F+EMFVGVGP+RVR LF AR+ AP I+FIDEIDA+ + E+E+TLNQ
Sbjct: 370 SEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENTLNQ 428
Query: 319 LLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKK 378
LLVEMDGF T VVVLAGTNRPDILD AL+RPGRFDRQI I PDIKGR IF+++L+
Sbjct: 429 LLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRP 488
Query: 379 LKLDNE--PSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVI 436
LKL+ E ++++AALTPGF+GADIANVCNEAALIAAR+ S I +HFE AI+RVI
Sbjct: 489 LKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVI 548
Query: 437 GGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNE 496
GGLEKK +V+ E++TVAYHE+GHAVAGWFLEHA+PLLKV+I+PRG LG+AQY+P E
Sbjct: 549 GGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGKG-LGYAQYLPKE 607
Query: 497 NLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGL 556
L TKEQL D CMTLGGR +E++ G+I+TGAQ+DL+KVT+ YAQ+ +G ++KVG
Sbjct: 608 QYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQ 667
Query: 557 LSFP-QRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLE 615
+SF R + KPYS T +ID EVR + AY+ T +L+ + + V ++A LLE
Sbjct: 668 VSFDLPRQGELVLEKPYSEATARLIDTEVRNLISTAYERTQQLLSDKKPEVEKVALRLLE 727
Query: 616 KEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGF--LEDDKESKE-----TKEGGTAEDDN 668
KEVL ++D+V +LG+RPF +E + Y+ F +G +++D E KE G+ ++++
Sbjct: 728 KEVLDKNDMVELLGKRPF--AEKSTYEEFVEGTGSVDEDTSLPEGLKDWNKERGSEKEES 785
Query: 669 SSSPLEPEV 677
+ + ++
Sbjct: 786 TEEQVARQI 794
Score = 69 (29.3 bits), Expect = 4.6e-163, Sum P(2) = 4.6e-163
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 26 QISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNETNDDFTQSPVNGSPD--KR 83
++++++F N L G+VDR+ V NK KV TP T + + + GS D +R
Sbjct: 164 EVTWKDFVNSYLAKGVVDRLEVVNKRYVKVIF--TPGKT-PVDGQYVWFNI-GSVDTFER 219
Query: 84 NLSQCKYYFNI 94
NL + I
Sbjct: 220 NLETAQLELGI 230
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 1540 (547.2 bits), Expect = 1.2e-162, Sum P(2) = 1.2e-162
Identities = 326/608 (53%), Positives = 426/608 (70%)
Query: 76 VNGSPDKRNLSQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMR 135
V +P K + +FNIGSV++FE LE Q+ LGI+ + +PV Y E + L+
Sbjct: 198 VTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG-SFLLS 256
Query: 136 FAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVA 195
PT L+ L + R+ + +F++G+ T K+ + D V FKDVA
Sbjct: 257 MLPTVLIIAFLLYTIRRGPAGIGRTGRGMGG---LFSVGETT-AKVLKDEID-VKFKDVA 311
Query: 196 GCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLS 255
GC+EAK EIMEFV+FLKNPK+Y++LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF++
Sbjct: 312 GCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFIT 371
Query: 256 MSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDEREST 315
+SGS+F+EMFVGVGP+RVR LF AR+ AP I+FIDEIDA+ + E+E+T
Sbjct: 372 VSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENT 430
Query: 316 LNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIY 375
LNQLLVEMDGF TT VV+LAGTNRPDILD ALLRPGRFDRQI I PDIKGR IF+++
Sbjct: 431 LNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVH 490
Query: 376 LKKLKLDN--EPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAID 433
L+ LKLD+ E +++LA+LTPGF+GAD+ANVCNEAALIAAR+ S I +HFE AI+
Sbjct: 491 LRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIE 550
Query: 434 RVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYV 493
RVIGGLEKK +V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY+
Sbjct: 551 RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQYL 609
Query: 494 PNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDK 553
P E L TKEQL D CMTLGGR +E++ G+I+TGAQ+DL KVT+ YAQ+ +G ++K
Sbjct: 610 PKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEK 669
Query: 554 VGLLSF--PQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAE 611
VG +SF P++ D + KPYS T +ID+EVR + AY TV L+ E + V ++A
Sbjct: 670 VGQISFDLPRQGDMV-LEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVAL 728
Query: 612 ELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGFLEDDKESKETKEGGTAEDDNSSS 671
LLEKEVL ++D+V +LG RPF +E + Y+ F +G D+++ EG +D N
Sbjct: 729 LLLEKEVLDKNDMVELLGPRPF--AEKSTYEEFVEGTGSLDEDTS-LPEG--LKDWNKER 783
Query: 672 PLEPEVVP 679
E E P
Sbjct: 784 EKEKEEPP 791
Score = 65 (27.9 bits), Expect = 1.2e-162, Sum P(2) = 1.2e-162
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 26 QISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRST 64
+I++++F N L G+VDR+ V NK +V TP T
Sbjct: 169 EITWKDFVNNYLSKGVVDRLEVVNKRFVRVTF--TPGKT 205
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 1538 (546.5 bits), Expect = 1.2e-162, Sum P(2) = 1.2e-162
Identities = 323/609 (53%), Positives = 426/609 (69%)
Query: 76 VNGSPDKRNLSQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMR 135
V +P K + +FNIGSV++FE LE Q+ LGI+ + +PV Y E + L+
Sbjct: 199 VTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG-SFLLS 257
Query: 136 FAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVA 195
PT L+ L + R+ + +F++G+ T K+ + D V FKDVA
Sbjct: 258 MLPTVLIIAFLLYTIRRGPAGIGRTGRGMGG---LFSVGETT-AKVLKDEID-VKFKDVA 312
Query: 196 GCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLS 255
GC+EAK EIMEFV+FLKNPK+Y++LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF++
Sbjct: 313 GCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFIT 372
Query: 256 MSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDEREST 315
+SGS+F+EMFVGVGP+RVR LF AR+ AP I+FIDEIDA+ + E+E+T
Sbjct: 373 VSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENT 431
Query: 316 LNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIY 375
LNQLLVEMDGF TT VV+LAGTNRPDILD AL+RPGRFDRQI I PDIKGR IF+++
Sbjct: 432 LNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVH 491
Query: 376 LKKLKLDN--EPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAID 433
L+ LKLD+ E +++LA+LTPGF+GAD+ANVCNEAALIAAR+ S I +HFE AI+
Sbjct: 492 LRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIE 551
Query: 434 RVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYV 493
RVIGGLEKK +V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY+
Sbjct: 552 RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQYL 610
Query: 494 PNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDK 553
P E L TKEQL D CMTLGGR +E++ G+I+TGAQ+DL KVT+ YAQ+ +G ++K
Sbjct: 611 PKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEK 670
Query: 554 VGLLSF--PQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAE 611
VG +SF P++ D + KPYS T +ID+EVR + AY TV L+ E + V ++A
Sbjct: 671 VGQISFDLPRQGDMV-LEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVAL 729
Query: 612 ELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGF--LEDDKESKE-TKEGGTAEDDN 668
LLEKEVL ++D+V +LG RPF E + Y+ F +G L++D E K+ + +
Sbjct: 730 LLLEKEVLDKNDMVELLGPRPFV--EKSTYEEFVEGTGSLDEDTSLPEGLKDWNKEREKD 787
Query: 669 SSSPLEPEV 677
P + +V
Sbjct: 788 KEEPQDEKV 796
Score = 67 (28.6 bits), Expect = 1.2e-162, Sum P(2) = 1.2e-162
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 16 IVFLTCFTFS--QISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRST 64
++F F S +I++++F N L G+VDR+ V NK +V TP T
Sbjct: 158 VMFYFLFKSSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTF--TPGKT 206
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 1535 (545.4 bits), Expect = 1.2e-162, Sum P(2) = 1.2e-162
Identities = 321/588 (54%), Positives = 420/588 (71%)
Query: 76 VNGSPDKRNLSQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMR 135
V +P K + +FNIGSV++FE LE Q+ LGI+ + +PV Y E + L+
Sbjct: 197 VTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG-SFLLS 255
Query: 136 FAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVA 195
PT L+ L + R+ + +F++G+ T K+ + D V FKDVA
Sbjct: 256 MLPTVLIIAFLLYTIRRGPAGIGRTGRGMGG---LFSVGETT-AKVLKDEID-VKFKDVA 310
Query: 196 GCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLS 255
GC+EAK EIMEFV+FLKNPK+Y++LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF++
Sbjct: 311 GCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFIT 370
Query: 256 MSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDEREST 315
+SGS+F+EMFVGVGP+RVR LF AR+ AP I+FIDEIDA+ + E+E+T
Sbjct: 371 VSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENT 429
Query: 316 LNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIY 375
LNQLLVEMDGF TT VV+LAGTNRPDILD ALLRPGRFDRQI I PDIKGR IF+++
Sbjct: 430 LNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVH 489
Query: 376 LKKLKLDN--EPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAID 433
L+ LKLD+ E +++LA+LTPGF+GAD+ANVCNEAALIAAR+ S I +HFE AI+
Sbjct: 490 LRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIE 549
Query: 434 RVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYV 493
RVIGGLEKK +V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY+
Sbjct: 550 RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQYL 608
Query: 494 PNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDK 553
P E L TKEQL D CMTLGGR +E++ G+I+TGAQ+DL KVT+ YAQ+ +G ++K
Sbjct: 609 PKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEK 668
Query: 554 VGLLSF--PQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAE 611
VG +SF P++ D + KPYS T +ID+EVR + +AY TV L+ E + V ++A
Sbjct: 669 VGQISFDLPRQGDMV-LEKPYSEATARMIDDEVRILISEAYKRTVALLTEKKADVEKVAL 727
Query: 612 ELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGF--LEDDKESKE 657
LLEKEVL ++D+V +LG RPF +E + Y+ F +G L++D E
Sbjct: 728 LLLEKEVLDKNDMVELLGPRPF--TEKSTYEEFVEGTGSLDEDTSLPE 773
Score = 70 (29.7 bits), Expect = 1.2e-162, Sum P(2) = 1.2e-162
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 15 LIVFLTCFTFSQISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRST 64
+I FL + +I++++F N L G+VDR+ V NK +V TP T
Sbjct: 157 MIYFLFKSSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTF--TPGKT 204
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 1535 (545.4 bits), Expect = 2.5e-162, Sum P(2) = 2.5e-162
Identities = 321/599 (53%), Positives = 415/599 (69%)
Query: 91 YFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFMG 150
+FNIGSV+SFE LE AQ G + +++PV Y NEV L PT L+ G L +M
Sbjct: 230 WFNIGSVDSFERNLEAAQTEQGTESINFVPVIYRNEVE-AASLTGLLPTLLIIGFLVYMM 288
Query: 151 RKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF 210
RK S +F + K+ + V FKDVAGC+EAK EIMEFV+F
Sbjct: 289 RK--SADMMGGGRGRKGGGLFGGVMQSTAKLTNPNEIGVGFKDVAGCEEAKIEIMEFVNF 346
Query: 211 LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGP 270
LKNP++Y +LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMFVGVGP
Sbjct: 347 LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGP 406
Query: 271 SRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTA 330
SRVR +F AR+ AP I+FIDEIDA+ + E+E+TLNQLLVEMDGF TT
Sbjct: 407 SRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGG-HSEQENTLNQLLVEMDGFNTTT 465
Query: 331 GVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQ 390
VVVLA TNR DILDKAL+RPGRFDRQI + PDIKGR IF+++L LK + + S+
Sbjct: 466 NVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKVHLGNLKTSLDKNELSR 525
Query: 391 RLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLE 450
++AALTPGF GADIANVCNEAALIAAR+ I ++HFE AI+RVI G+EKK V++ E
Sbjct: 526 KMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQAIERVIAGMEKKTNVLAPEE 585
Query: 451 RRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTC 510
+RTVA+HE+GHAVAGWFLEHA+PLLKV+I+PRG LG+AQY+P ++ L++KEQLFD C
Sbjct: 586 KRTVAHHEAGHAVAGWFLEHADPLLKVSIIPRGKG-LGYAQYLPKDHYLLSKEQLFDRMC 644
Query: 511 MTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFP--QRDDTFEM 568
MTLGGR AE++ +I+TGAQ+DL+K+T + Y+QV +G ++KVG +SF Q D
Sbjct: 645 MTLGGRVAEELFFNRITTGAQDDLKKITDIAYSQVVRFGMNEKVGQVSFDVGQAGDPV-F 703
Query: 569 TKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVL 628
+KPYS T +IDNEVR + A++ T L+ +H+E+V ++AE LL+ EVL +DD++ +L
Sbjct: 704 SKPYSEDTAQLIDNEVRSIIKCAHEATTSLLTKHKENVQKVAERLLQNEVLSRDDMIELL 763
Query: 629 GERPFKHSEPTNYDRFKKGF--LEDDKESKE-----TKEGGTAED-DNSSSPLEPEVVP 679
G RPFK E + Y+ F +G E+D E KE E D S+P P P
Sbjct: 764 GPRPFK--EKSTYEEFVEGTGSFEEDTTLPEGLKSWNKEKERTEPLDAGSTPSSPPTKP 820
Score = 67 (28.6 bits), Expect = 2.5e-162, Sum P(2) = 2.5e-162
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 24 FSQISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRS 63
+ +IS++EF N L G+V+++ V NK +V ++ S
Sbjct: 185 YKEISWKEFVNSYLSKGVVEKLEVVNKKWVRVRLQQNSNS 224
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 1534 (545.1 bits), Expect = 3.2e-162, Sum P(2) = 3.2e-162
Identities = 328/616 (53%), Positives = 429/616 (69%)
Query: 76 VNGSPDKRNLSQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMR 135
V +P K + +FNIGSV++FE LE Q+ LGI+ + +PV Y E + L+
Sbjct: 197 VTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG-SFLLS 255
Query: 136 FAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVA 195
PT L+ L + R+ + +F++G+ T K+ + D V FKDVA
Sbjct: 256 MLPTVLIIAFLLYTIRRGPAGIGRTGRGMGG---LFSVGETT-AKVLKDEID-VKFKDVA 310
Query: 196 GCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLS 255
GC+EAK EIMEFV+FLKNPK+Y++LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF++
Sbjct: 311 GCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFIT 370
Query: 256 MSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDEREST 315
+SGS+F+EMFVGVGP+RVR LF AR+ AP I+FIDEIDA+ + E+E+T
Sbjct: 371 VSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENT 429
Query: 316 LNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIY 375
LNQLLVEMDGF TT VV+LAGTNRPDILD ALLRPGRFDRQI I PDIKGR IF+++
Sbjct: 430 LNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVH 489
Query: 376 LKKLKLDN--EPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAID 433
L+ LKLD+ E +++LA+LTPGF+GAD+ANVCNEAALIAAR+ S I +HFE AI+
Sbjct: 490 LRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIE 549
Query: 434 RVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYV 493
RVIGGLEKK +V+ E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY+
Sbjct: 550 RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQYL 608
Query: 494 PNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDK 553
P E L TKEQL D CMTLGGR +E++ G+I+TGAQ+DL KVT+ YAQ+ +G ++K
Sbjct: 609 PKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEK 668
Query: 554 VGLLSF--PQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAE 611
VG +SF P++ D + KPYS T +ID+EVR + AY TV L+ E + V ++A
Sbjct: 669 VGQISFDLPRQGDMV-LEKPYSEATARMIDDEVRILISDAYRRTVALLTEKKADVEKVAL 727
Query: 612 ELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGF--LEDDKESKE-----TKEGGTA 664
LLEKEVL ++D+V++LG RPF +E + Y+ F +G L++D E KE
Sbjct: 728 LLLEKEVLDKNDMVQLLGPRPF--TEKSTYEEFVEGTGSLDEDTSLPEGLQDWNKEREKE 785
Query: 665 E--DDNSSSPLEPEVV 678
E + PL +VV
Sbjct: 786 EKKEKEKEEPLNEKVV 801
Score = 67 (28.6 bits), Expect = 3.2e-162, Sum P(2) = 3.2e-162
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 15 LIVFLTCFTFSQISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRST 64
+I F+ + +I++++F N L G+VDR+ V NK +V TP T
Sbjct: 157 MIYFVFKSSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTF--TPGKT 204
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 1520 (540.1 bits), Expect = 1.1e-161, Sum P(2) = 1.1e-161
Identities = 310/579 (53%), Positives = 403/579 (69%)
Query: 92 FNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFMGR 151
F IGSV+ FEE++++ Q+ L I P D IP+ Y + + L F PT +L G L+F+ R
Sbjct: 187 FTIGSVDIFEEQMDQIQDLLNIPPRDRIPIKYIERSSPFTFLFPFLPTIILLGGLYFITR 246
Query: 152 KMQSXX-XXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF 210
K+ S +FN+GK+ + K+ FK+VAGCDEAKQEIMEFVHF
Sbjct: 247 KINSSPPNANGGGGGGLGGMFNVGKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHF 306
Query: 211 LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGP 270
LKNP KY +LGAKIP+GA+L GPPGTGKTLLAKATAGE+ VPFLS+SGS+F+EMFVGVG
Sbjct: 307 LKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGA 366
Query: 271 SRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX-XNDERESTLNQLLVEMDGFGTT 329
SRVR LF +AR APSI+FIDEIDAI NDERE+TLNQLLVEMDGF T+
Sbjct: 367 SRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTS 426
Query: 330 AGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLD----NEP 385
VVVLAGTNRPD+LD AL+RPGRFDR I ID PD+ GR QI+ ++LK+L LD ++
Sbjct: 427 DQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDM 486
Query: 386 SFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKV 445
+ S +LA LTPGF GADIAN CNEAALIAAR+ IT+ HFE AI+RVI GLEKK +V
Sbjct: 487 NNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRV 546
Query: 446 ISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQL 505
+SK E+R+VAYHE+GHAV GWFL++A+PLLKV+I+PRG ALG+AQY+P + L+++EQ
Sbjct: 547 LSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQF 606
Query: 506 FDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDT 565
M LGGR +E++ +++GA +D +KVT+M A V G S K+G LSF Q D
Sbjct: 607 RHRMIMALGGRVSEELHFPSVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGN 666
Query: 566 FEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLV 625
F++ KP+S+KT ID EV+ V A+ +L+ ++ + V +A+ELL KE + ++D++
Sbjct: 667 FKVNKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMI 726
Query: 626 RVLGERPFKHSEPTNYDRFKKGFLEDDKESKETKEGGTA 664
R+LG RPFK + F+K +L D K + E E A
Sbjct: 727 RLLGPRPFKERN----EAFEK-YL-DPKSNTEPPEAPAA 759
Score = 76 (31.8 bits), Expect = 1.1e-161, Sum P(2) = 1.1e-161
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 27 ISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNET 67
++FQ+FK K LE GLV +I V NK + + + +T + + T
Sbjct: 148 LTFQDFKTKYLEKGLVSKIYVVNKFLVEAELVNTKQVVSFT 188
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 1512 (537.3 bits), Expect = 3.6e-161, Sum P(2) = 3.6e-161
Identities = 302/552 (54%), Positives = 395/552 (71%)
Query: 89 KYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWF 148
+YYF+IGS++SF+ KLE+AQ LGI P +++PV Y +EV+ L+ FAPT L+ G++ +
Sbjct: 199 QYYFSIGSIDSFDRKLEDAQRQLGIPPSEFVPVAYHDEVSVLATLLSFAPTLLIIGSVIY 258
Query: 149 MGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFV 208
+ R+ IF IGK+ + K+ F DVAG DEAK+EIMEFV
Sbjct: 259 LSRRASGAAGGGQGG------IFGIGKSRAKMFNHETDIKIKFADVAGVDEAKEEIMEFV 312
Query: 209 HFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGV 268
FLKNPK YE LGAKIP+GA+L GPPGTGKTLLAKATAGE+ VPFLS+SGS+F+EMFVGV
Sbjct: 313 KFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGV 372
Query: 269 GPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGT 328
GPSRVR LF AR+ AP I+FIDEIDAI NDERESTLNQLLVEMDGF +
Sbjct: 373 GPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTS 432
Query: 329 TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFY 388
+ +VV AGTNRPD+LD ALLRPGRFDRQITID+PDI GR+QIF+++LK +K +
Sbjct: 433 SEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLI 492
Query: 389 SQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISK 448
++RLA LT GF GADI NVCNE ALIAAR+ S ++ M HFE AI+RV GLEKK++V+S
Sbjct: 493 AKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERVTAGLEKKSRVLSP 552
Query: 449 LERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDM 508
E+ TVA+HE+GHAVAGWF+E+ +PLLKV+I+PR A LG+A Y+P + LM++ Q+ D
Sbjct: 553 EEKNTVAHHEAGHAVAGWFMEYVDPLLKVSIIPRAQA-LGYASYLPKDQYLMSRGQILDQ 611
Query: 509 TCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTF 566
M L GR +E++ G KI++GA +D +KVT+M A V YG S VG +++P DT
Sbjct: 612 MGMALAGRVSEEIFFGPEKITSGASDDFQKVTRMAQAYVTQYGMSPTVGTIAYPI--DTR 669
Query: 567 E-MTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLV 625
E + KP+S T +ID E+R+ V AY+ T KL+ EH++ + IA+ LL+KEV+ +++
Sbjct: 670 ETVQKPFSEATAQMIDEEIRKLVKHAYERTKKLLLEHKQGLENIAQRLLQKEVITYNEVE 729
Query: 626 RVLGERPF--KH 635
+LG RP+ KH
Sbjct: 730 TILGPRPYAYKH 741
Score = 79 (32.9 bits), Expect = 3.6e-161, Sum P(2) = 3.6e-161
Identities = 12/33 (36%), Positives = 27/33 (81%)
Query: 26 QISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVK 58
+I++Q+F+ + L+ GLV+R+VV N+++ +V ++
Sbjct: 158 EITWQDFRQQFLDKGLVERLVVVNRNMVRVILR 190
Score = 39 (18.8 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 62 RSTNETNDDFTQSPVNGSPDKR 83
R + NDD + +NG+ K+
Sbjct: 104 RKNGQKNDDSKKKGLNGNDPKK 125
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 1567 (556.7 bits), Expect = 6.5e-161, P = 6.5e-161
Identities = 331/665 (49%), Positives = 441/665 (66%)
Query: 10 PILCSLIVFLTCFTFSQISFQ-EFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNETN 68
P+ ++ +F TF +SF + N L E + K +AK +V N++
Sbjct: 173 PVSKNVNLFQIGLTFFLLSFLLDLLNSLEEQSEITWQDFREKLLAKGYVAKLI-VVNKSM 231
Query: 69 DDFTQSPVNGSPDKRNLSQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVN 128
+ NG N + YYF IGS++SFE KL++AQ+ L ID IPV Y E N
Sbjct: 232 VKVMLND-NGKNQADNYGRNFYYFTIGSIDSFEHKLQKAQDELDIDKDFRIPVLYVQEGN 290
Query: 129 WYQELMRFAPTALLF-GALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKD 187
W + + + PT L+ G +W R Q+ IF + ++ K +
Sbjct: 291 WAKAMFQILPTVLMIAGIIWLTRRSAQAAGGSRGG-------IFGLSRSKAKKFNTETDV 343
Query: 188 KVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
K+ FKDVAGCDEAK+EIMEFV FLK P +YE++GAKIP+GA+L GPPGTGKTLLAKATAG
Sbjct: 344 KIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAG 403
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
E+GVPF +SGS+F+EMFVGVG +RVR LF+ AR+ APSIVFIDEIDAI
Sbjct: 404 EAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSG 463
Query: 308 XNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 367
NDERE+TLNQ+LVEMDGF VVVLAGTNRPDILDKALLRPGRFDR I IDKP+++G
Sbjct: 464 ANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEG 523
Query: 368 RDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQH 427
R IF ++L LKL E RLAALTPGF+GADIANVCNEAALIAAR++ + + H
Sbjct: 524 RKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNH 583
Query: 428 FEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAAL 487
FE AI+RVIGG+E+K+K++S E++ VAYHE+GHAV GW+L++A+PLLKV+I+PRG AL
Sbjct: 584 FEQAIERVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGAL 643
Query: 488 GFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAV 547
G+AQY+P + L+T++QL D M+LGGR +E++ +++GA +D +KVT M A V
Sbjct: 644 GYAQYLPGDIFLLTEQQLKDRMTMSLGGRVSEELHFPSVTSGASDDFKKVTSMATAMVTE 703
Query: 548 YGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVA 607
G SDK+G +++ +RDD+ ++TKP+S +TG IID+EV V + +D KL++E E V
Sbjct: 704 LGMSDKIGWVNYQKRDDS-DLTKPFSDETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVE 762
Query: 608 QIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGFLEDDKESKETKEGGTAEDD 667
+IA+ LL+KEVL ++D++ +LG+RPF P D F K +L D + K KE E
Sbjct: 763 KIAQVLLKKEVLTREDMIDLLGKRPF----PERNDAFDK-YLNDYETEKIRKEEEKNEKR 817
Query: 668 NSSSP 672
N P
Sbjct: 818 NEPKP 822
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 1522 (540.8 bits), Expect = 9.6e-161, Sum P(2) = 9.6e-161
Identities = 331/621 (53%), Positives = 428/621 (68%)
Query: 68 NDDFTQS-PVNGSPDKRNLSQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENE 126
N F + PV G+ +R + +FNIGSV++FE LE AQ LGI+P + V Y E
Sbjct: 187 NKQFVRVIPVPGTTSERFV-----WFNIGSVDTFERNLESAQWELGIEPTNQAAVVYTTE 241
Query: 127 VNWYQELMRFAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAK 186
+ L PT +L L + R+ +F++G+ T K+ N
Sbjct: 242 SDG-SFLRSLVPTLVLVSILLYAMRR----GPMGTGRGGRGGGLFSVGETT-AKILKNNI 295
Query: 187 DKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 246
D V F DVAGC+EAK EIMEFV+FLKNPK+Y++LGAKIPKGA+L GPPGTGKTLLAKATA
Sbjct: 296 D-VRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATA 354
Query: 247 GESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXX 306
GE+ VPF++++GS+F+EMFVGVGP+RVR +F AR+ AP I+FIDEIDAI
Sbjct: 355 GEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLG 414
Query: 307 XXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 366
+ E+E+TLNQ+LVEMDGF ++ VVVLAGTNRPDILD AL RPGRFDRQI I PDIK
Sbjct: 415 GQS-EQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIK 473
Query: 367 GRDQIFQIYLKKLKLDNEPS--FYSQRLAALTPGFAGADIANVCNEAALIAARNESAQIT 424
GR IF+++L+ LKLD S S++LAALTPGF GADI+NVCNEAALIAAR+ S +
Sbjct: 474 GRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQ 533
Query: 425 MQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGT 484
+HFE AI+RVIGGLEKK +V+ E+ TVAYHE+GHAV GWFLEHA+PLLKV+I+PRG
Sbjct: 534 ERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGK 593
Query: 485 AALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQ 544
LG+AQY+P E L T+EQLFD CM LGGR AEQ+ G+I+TGAQ+DL KVT+ YAQ
Sbjct: 594 G-LGYAQYLPREQFLYTREQLFDRMCMMLGGRVAEQLFFGQITTGAQDDLRKVTQSAYAQ 652
Query: 545 VAVYGFSDKVGLLSF--PQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEH 602
+ +G S+K+G +SF P++ +T + KPYS T +ID EVR V AY+ T++L+ +
Sbjct: 653 IVQFGMSEKLGQVSFDFPRQGETM-VEKPYSEATAQLIDEEVRCLVRSAYNRTLELLTQC 711
Query: 603 REHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGF--LEDD-------K 653
RE V ++ LLEKEVL + D++ +LG RPF +E + Y+ F +G LE+D K
Sbjct: 712 REQVEKVGRRLLEKEVLEKADMIELLGPRPF--AEKSTYEEFVEGTGSLEEDTSLPEGLK 769
Query: 654 E-SKETKEGGTAEDDNSSSPL 673
+ +K +EGGT E SP+
Sbjct: 770 DWNKGREEGGT-ERGLQESPV 789
Score = 65 (27.9 bits), Expect = 9.6e-161, Sum P(2) = 9.6e-161
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 26 QISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNETNDDFTQSPVNGSPD--KR 83
+I+++ F L GLVDR+ V NK +V P +T+E F + GS D +R
Sbjct: 164 EITWKHFVQYYLARGLVDRLEVVNKQFVRVI--PVPGTTSER---FVWFNI-GSVDTFER 217
Query: 84 NLSQCKYYFNI 94
NL ++ I
Sbjct: 218 NLESAQWELGI 228
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 1520 (540.1 bits), Expect = 2.0e-160, Sum P(2) = 2.0e-160
Identities = 317/574 (55%), Positives = 410/574 (71%)
Query: 91 YFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMR-FAPTALLFGALWFM 149
+FNIGSV++FE LE AQ LG++P + + V Y E + L+R PT +L G L +
Sbjct: 178 WFNIGSVDTFERNLESAQWELGVEPTNQVSVVYTTESDG--SLLRSLVPTLVLVGILLYA 235
Query: 150 GRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVH 209
++ +F++G+ T K+ N D V F DVAGC+EAK EIMEFV+
Sbjct: 236 MKR----GPMGTGRGGRGGGLFSVGETT-AKILKNNID-VRFADVAGCEEAKLEIMEFVN 289
Query: 210 FLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVG 269
FLKNPK+Y++LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF++++GS+F+EMFVGVG
Sbjct: 290 FLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEAKVPFITVNGSEFLEMFVGVG 349
Query: 270 PSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTT 329
P+RVR +F AR+ AP I+FIDEIDAI + E+E+TLNQ+LVEMDGF +T
Sbjct: 350 PARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQS-EQENTLNQMLVEMDGFNST 408
Query: 330 AGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPS--F 387
VVVLAGTNRPDILD AL RPGRFDRQI I PDIKGR IF+++L+ LKLD +
Sbjct: 409 TNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDESLTRDA 468
Query: 388 YSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVIS 447
S++LAALTPGF GADI+NVCNEAALIAAR+ S + +HFE AI+RVIGGLEKK +V+
Sbjct: 469 LSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQ 528
Query: 448 KLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFD 507
E+ TVAYHE+GHAV GWFLEHA+PLLKV+I+PRG LG+AQY+P E L T+EQLFD
Sbjct: 529 PSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKG-LGYAQYLPREQYLYTREQLFD 587
Query: 508 MTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSF--PQRDDT 565
CM LGGR AEQ+ G+I+TGAQ+DL KVT+ YAQ+ +G S+K+G +SF P++ +T
Sbjct: 588 RMCMMLGGRVAEQLFFGQITTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDFPRQGET 647
Query: 566 FEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLV 625
+ KPYS T +ID EVR V AY+ T++L+ + RE V ++ LLEKEVL + D++
Sbjct: 648 M-VEKPYSEATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMI 706
Query: 626 RVLGERPFKHSEPTNYDRFKKGF--LEDDKESKE 657
+LG RPF +E + Y+ F +G LE+D E
Sbjct: 707 ELLGPRPF--AEKSTYEEFVEGTGSLEEDTSLPE 738
Score = 64 (27.6 bits), Expect = 2.0e-160, Sum P(2) = 2.0e-160
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 26 QISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNETNDDFTQSPVNGSPD--KR 83
+I+++ F L GLVDR+ V NK +V P +T+E F + GS D +R
Sbjct: 136 EITWKHFVQYYLARGLVDRLEVVNKQFVRVI--PVPGTTSEK---FVWFNI-GSVDTFER 189
Query: 84 NLSQCKYYFNI 94
NL ++ +
Sbjct: 190 NLESAQWELGV 200
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 892 (319.1 bits), Expect = 1.3e-158, Sum P(2) = 1.3e-158
Identities = 186/356 (52%), Positives = 242/356 (67%)
Query: 26 QISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNETNDDFTQSPVNGSPDKRNL 85
Q++FQ+F +E GLV ++ V NK+V + + P + + + + NG P
Sbjct: 136 QLTFQDFITNYIEKGLVTKLTVVNKAVVEA--ELIPGAVSNISHNR-----NGKP----- 183
Query: 86 SQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGA 145
F IGS+E FE+++ + Q+ L I ++ +PV YE+ +W +M PT LL G
Sbjct: 184 ---YVVFTIGSLEFFEDEMNKVQDRLKIPINERLPVVYEDHTSWLSYIMPILPTVLLIGG 240
Query: 146 LWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIM 205
L+++ + IF IGK+ + + K+ FKDVAGCDE+K+EIM
Sbjct: 241 LYYLTMRRMPGGAGGAGGAGGPGGIFKIGKSKAKLFNQENEVKIKFKDVAGCDESKEEIM 300
Query: 206 EFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMF 265
EFV FL++P KYE+LGAKIP+GA+L GPPGTGKTLLAKATAGE+GVPFLS+SGS+F+EMF
Sbjct: 301 EFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMF 360
Query: 266 VGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDG 325
VGVG SRVR LF+ AR+ AP+I+F+DEIDAI NDERE+TLNQLLVEMDG
Sbjct: 361 VGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGRMGG-NDERENTLNQLLVEMDG 419
Query: 326 FGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKL 381
F TT VVVLAGTNRPDILDKALLRPGRFDR I+ID PD++GR QIF+++L KLKL
Sbjct: 420 FDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKL 475
Score = 675 (242.7 bits), Expect = 1.3e-158, Sum P(2) = 1.3e-158
Identities = 138/317 (43%), Positives = 206/317 (64%)
Query: 364 DIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQI 423
D K +D F Y ++LK + E + RLAALTPGFAGADIAN CNE ALIAAR ++ +
Sbjct: 482 DAKQKDVDFSKY-QQLK-NEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAV 539
Query: 424 TMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRG 483
HFE AI+RVI GLEKK++++S E++TVAYHE+GHA+ GWFL++A+PL+KV+I+PRG
Sbjct: 540 DTYHFEQAIERVIAGLEKKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRG 599
Query: 484 TAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYA 543
ALG+AQY+P + L ++EQ MTLGGR +E++ +++GA +D +K+T+M
Sbjct: 600 QGALGYAQYLPKDQYLTSQEQFKHRMIMTLGGRVSEELHFDTVTSGASDDFKKITQMAQQ 659
Query: 544 QVAVYGFSDKVGLLSFPQRDDT---FEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIE 600
+ G SDK+G + + D F++ YS T IID EV+ + ++Y+ KL+
Sbjct: 660 MILKLGMSDKLGQICYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLT 719
Query: 601 EHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGFLEDDKESKETKE 660
E + V ++AEEL +KEVL ++D++++ G RPF +D++ +G ED + K +
Sbjct: 720 EKLDLVDKVAEELFKKEVLTREDMIKICGPRPFPERNDA-FDKYLQG--EDAFKGKPKSK 776
Query: 661 GGTAEDDNSSSPLE-PE 676
+ DD +SSP PE
Sbjct: 777 DQNSNDDGASSPSSAPE 793
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 892 (319.1 bits), Expect = 1.3e-158, Sum P(2) = 1.3e-158
Identities = 186/356 (52%), Positives = 242/356 (67%)
Query: 26 QISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNETNDDFTQSPVNGSPDKRNL 85
Q++FQ+F +E GLV ++ V NK+V + + P + + + + NG P
Sbjct: 136 QLTFQDFITNYIEKGLVTKLTVVNKAVVEA--ELIPGAVSNISHNR-----NGKP----- 183
Query: 86 SQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGA 145
F IGS+E FE+++ + Q+ L I ++ +PV YE+ +W +M PT LL G
Sbjct: 184 ---YVVFTIGSLEFFEDEMNKVQDRLKIPINERLPVVYEDHTSWLSYIMPILPTVLLIGG 240
Query: 146 LWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIM 205
L+++ + IF IGK+ + + K+ FKDVAGCDE+K+EIM
Sbjct: 241 LYYLTMRRMPGGAGGAGGAGGPGGIFKIGKSKAKLFNQENEVKIKFKDVAGCDESKEEIM 300
Query: 206 EFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMF 265
EFV FL++P KYE+LGAKIP+GA+L GPPGTGKTLLAKATAGE+GVPFLS+SGS+F+EMF
Sbjct: 301 EFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMF 360
Query: 266 VGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDG 325
VGVG SRVR LF+ AR+ AP+I+F+DEIDAI NDERE+TLNQLLVEMDG
Sbjct: 361 VGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGRMGG-NDERENTLNQLLVEMDG 419
Query: 326 FGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKL 381
F TT VVVLAGTNRPDILDKALLRPGRFDR I+ID PD++GR QIF+++L KLKL
Sbjct: 420 FDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKL 475
Score = 675 (242.7 bits), Expect = 1.3e-158, Sum P(2) = 1.3e-158
Identities = 138/317 (43%), Positives = 206/317 (64%)
Query: 364 DIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQI 423
D K +D F Y ++LK + E + RLAALTPGFAGADIAN CNE ALIAAR ++ +
Sbjct: 482 DAKQKDVDFSKY-QQLK-NEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAV 539
Query: 424 TMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRG 483
HFE AI+RVI GLEKK++++S E++TVAYHE+GHA+ GWFL++A+PL+KV+I+PRG
Sbjct: 540 DTYHFEQAIERVIAGLEKKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRG 599
Query: 484 TAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYA 543
ALG+AQY+P + L ++EQ MTLGGR +E++ +++GA +D +K+T+M
Sbjct: 600 QGALGYAQYLPKDQYLTSQEQFKHRMIMTLGGRVSEELHFDTVTSGASDDFKKITQMAQQ 659
Query: 544 QVAVYGFSDKVGLLSFPQRDDT---FEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIE 600
+ G SDK+G + + D F++ YS T IID EV+ + ++Y+ KL+
Sbjct: 660 MILKLGMSDKLGQICYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLT 719
Query: 601 EHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGFLEDDKESKETKE 660
E + V ++AEEL +KEVL ++D++++ G RPF +D++ +G ED + K +
Sbjct: 720 EKLDLVDKVAEELFKKEVLTREDMIKICGPRPFPERNDA-FDKYLQG--EDAFKGKPKSK 776
Query: 661 GGTAEDDNSSSPLE-PE 676
+ DD +SSP PE
Sbjct: 777 DQNSNDDGASSPSSAPE 793
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 1498 (532.4 bits), Expect = 8.8e-158, Sum P(2) = 8.8e-158
Identities = 302/613 (49%), Positives = 418/613 (68%)
Query: 52 VAKVFVKSTPRSTNETNDDFTQSPVNGSPDKRNLSQCKYYFNIGSVESFEEKLEEAQEAL 111
V K+ + N+ + +N + ++ Q + YF IGSVESFE L EAQ+
Sbjct: 241 VTDYLTKNLVKKVTVINNSVVEVELNENGASQHNQQKRLYFTIGSVESFERNLREAQDKY 300
Query: 112 GIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIF 171
I P +P+ Y + N + L+ F PT L GA+++M +K S
Sbjct: 301 DIPPQLRVPIHYTTKGNMARFLINFLPTLLFLGAIYWMTKKAASSMGGMGP--------M 352
Query: 172 NIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLV 231
GK+T K + K+ FKDVAG EAKQE+MEFV FL+NP+KYE+LGAKIP+GA+L
Sbjct: 353 GFGKSTAKKFNQETDVKIKFKDVAGMAEAKQEVMEFVKFLQNPEKYEKLGAKIPRGAILS 412
Query: 232 GPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFID 291
GPPGTGKTLLAKATAGE+GVPF S+SGS+F+EMFVGVG SRVR LF+ AR+ APSIVF+D
Sbjct: 413 GPPGTGKTLLAKATAGEAGVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVD 472
Query: 292 EIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRP 351
EIDAI NDERE+TLNQLLVEMDGF T+ VVVLAGTNRPDILD+AL+RP
Sbjct: 473 EIDAIGKQRSKGNATGANDERETTLNQLLVEMDGFDTSDHVVVLAGTNRPDILDRALMRP 532
Query: 352 GRFDRQITIDKPDIKGRDQIFQIYLKKLKL--DNEPSFYSQRLAALTPGFAGADIANVCN 409
GRFDR + ID P++ GR +IF ++L+K+ L D +P S RLAALTPGF+GADIANVCN
Sbjct: 533 GRFDRHVHIDNPELLGRKEIFDVHLQKITLQKDIDPDL-SGRLAALTPGFSGADIANVCN 591
Query: 410 EAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 469
EAALIAAR + +T++HFE AI+RVIGG+EKK+K+++ E++ VAYHE+GHA+ GW+L+
Sbjct: 592 EAALIAARYNAEFVTLRHFELAIERVIGGVEKKSKLLNPEEQKIVAYHEAGHAICGWYLK 651
Query: 470 HAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTG 529
+A PLLKV+I+PRG ALG+AQY+P + LM+ QL+D MTLGGR +E++ +++G
Sbjct: 652 YAHPLLKVSIIPRGQGALGYAQYLPPDQYLMSTLQLYDRMIMTLGGRVSEELHFASVTSG 711
Query: 530 AQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVG 589
A +D +KVT + + V +G S VG++++ ++TKP+S +T IID+EV+ V
Sbjct: 712 AHDDFKKVTGIAQSMVLRFGMSKTVGMVNYYDTRSQDDLTKPFSDETSRIIDSEVQRIVS 771
Query: 590 KAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKG-- 647
Y +L+ E + V +A+ELL+KE + ++D++R+LG+RPF + +D++ G
Sbjct: 772 DCYQKCKQLLTEKSKEVELVAQELLKKEFITREDMIRLLGKRPFPETNDA-FDKYLDGKP 830
Query: 648 FLEDDKESKETKE 660
++++ E K+
Sbjct: 831 AFKNEQPENEKKD 843
Score = 61 (26.5 bits), Expect = 8.8e-158, Sum P(2) = 8.8e-158
Identities = 24/89 (26%), Positives = 41/89 (46%)
Query: 9 FPILCSLIVFL-TCFTFSQISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNET 67
F + SLI+ + + ++I+FQ F L LV ++ V N SV +V + S +
Sbjct: 216 FSLATSLILGMGSSNDDTEINFQSFVTDYLTKNLVKKVTVINNSVVEVELNENGASQHNQ 275
Query: 68 NDD--FTQSPVNGSPDKRNLSQCKYYFNI 94
FT V +RNL + + ++I
Sbjct: 276 QKRLYFTIGSVESF--ERNLREAQDKYDI 302
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 1496 (531.7 bits), Expect = 1.8e-157, Sum P(2) = 1.8e-157
Identities = 319/618 (51%), Positives = 411/618 (66%)
Query: 64 TNETND--DFTQSPVNGSPDKRNLSQCKYY-FNIGSVESFEEKLEEAQEALGIDPHDYIP 120
TN T + + Q V GS + K + I S E F+ KL+E Q+ALGI + +
Sbjct: 238 TNTTAEVVEKVQPEVGGS----GIGSLKVHTITIISPEDFQRKLQEDQDALGIPLNKQVF 293
Query: 121 VTYENEVNWYQELMRFAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITK 180
T+ + +EL+ +PT L+ G L + R + S +F K+ K
Sbjct: 294 ATFNHTNKILRELVAISPTLLMIGLLIYFSRGINSSLTKGASS------LFK-SKSKAVK 346
Query: 181 MDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTL 240
A FKDVAG DEAK+EIMEFV FLK+P +Y++LGA+IPKGA+L GPPGTGKTL
Sbjct: 347 ----ATSTTTFKDVAGMDEAKEEIMEFVSFLKDPSRYKKLGARIPKGAILSGPPGTGKTL 402
Query: 241 LAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXX 300
LAKATAGE+GV F ++SGSDF+EMFVGVGPSRVR LF+EAR P IVFIDEIDA+
Sbjct: 403 LAKATAGEAGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEIDAVGRAR 462
Query: 301 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITI 360
NDERE+TLNQLLVEMDGF +T+GVVV AGTNR D+LD ALLRPGRFDRQI +
Sbjct: 463 SRGGFH--NDERENTLNQLLVEMDGFSSTSGVVVFAGTNRSDVLDPALLRPGRFDRQIYV 520
Query: 361 DKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNES 420
KPDIKGR IF ++LK +KLD E +++LA LTPGF+GADIANVCNE AL+AAR ++
Sbjct: 521 GKPDIKGRKDIFMVHLKNIKLDGEMEEIAKKLATLTPGFSGADIANVCNEGALVAARKDA 580
Query: 421 AQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 480
HFE AI+RV+ GL+++N+V+S ER VA+HE+GHAV GWFLEH +PLLKV+IV
Sbjct: 581 TSANFDHFEEAIERVLVGLKRENRVLSPEERTIVAHHEAGHAVVGWFLEHTDPLLKVSIV 640
Query: 481 PRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKM 540
PRG+ LGFAQY P + L T+EQLFD C++LGGR AE ++ +ISTGA +DL+KVTKM
Sbjct: 641 PRGSGTLGFAQYQPKDQYLYTREQLFDRICVSLGGRIAESIIFDRISTGAMDDLDKVTKM 700
Query: 541 TYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIE 600
A V YG S+KVG+ SF + D + KPYS T +ID E+R V AY T +L+
Sbjct: 701 ASASVVNYGMSEKVGVASFRKEGDDITVVKPYSQATARMIDEEIRRMVNDAYSKTTQLLH 760
Query: 601 EHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGFLEDDK--ESKET 658
E +E + ++A LLEKEV+ +DDL +LG RP+ E T + G E++K E++ +
Sbjct: 761 EKKELLIKLATILLEKEVIQRDDLRTILGPRPY--GEQTTWAELT-GETENEKIKEAELS 817
Query: 659 KEGGTAEDDNSSSPLEPE 676
E E D S P +P+
Sbjct: 818 TESQQKEVD-SIEPQQPK 834
Score = 60 (26.2 bits), Expect = 1.8e-157, Sum P(2) = 1.8e-157
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 11 ILCSLIVFLTCFTF-----SQISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTP 61
IL + + FTF +I +Q F+NK+L + I++TN + A+V K P
Sbjct: 196 ILAIVAANILIFTFIKPQNDEIDYQTFRNKILPNAEIHSILLTN-TTAEVVEKVQP 250
Score = 53 (23.7 bits), Expect = 1.0e-156, Sum P(2) = 1.0e-156
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 48 TNKSVAKVFVKSTPRSTNETNDDFTQSPV-NGSPDKRNLSQCKYY--FNIGSVESFEEKL 104
T KS ++ + + NE N+ QS + N + RN+ +C Y FN +E+ + +
Sbjct: 24 TKKSRLISYLNRSLINNNE-NNKIPQSIIDNNNNSNRNILKCNIYSSFNNNKIENNKLFI 82
Query: 105 EEAQ 108
E Q
Sbjct: 83 SEIQ 86
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 1465 (520.8 bits), Expect = 1.6e-156, Sum P(2) = 1.6e-156
Identities = 305/594 (51%), Positives = 410/594 (69%)
Query: 91 YFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTA--LLFGALWF 148
YFNIGSV+SFE L AQ L D IPV Y++E N+ +E+ A LLFG ++
Sbjct: 189 YFNIGSVDSFERSLGAAQHHLQYDADRQIPVLYKSEFNFKREIPNLISVAFPLLFG--YY 246
Query: 149 MGRKMQSXXXXXXXXXXXXXXIFNI--GKATITKMDMNAKD-KVFFKDVAGCDEAKQEIM 205
+ R ++ + + G T +N +D KV F DVAGC+EAK EIM
Sbjct: 247 IYRMLKGGGAAGGAGRAGGGGLGGMFGGFGQSTARVINREDIKVKFADVAGCEEAKIEIM 306
Query: 206 EFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMF 265
EFV+FLKNP++Y++LGAKIPKGA+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMF
Sbjct: 307 EFVNFLKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMF 366
Query: 266 VGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDG 325
VGVGP+RVR +F AR+ +P I+FIDEIDA+ + E+E+TLNQLLVEMDG
Sbjct: 367 VGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGMGGHSEQENTLNQLLVEMDG 426
Query: 326 FGTT-AGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNE 384
F T + V+V+A TNR DILD ALLRPGRFDRQI + PDIKGR IF+++L L+ +
Sbjct: 427 FTTDESSVIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIKGRASIFRVHLGPLRTSLD 486
Query: 385 PSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNK 444
+ S++LAA TPGF+GADI+NVCNEAALIAAR+ + +I+ +HFE AI+RV+ G+EKK +
Sbjct: 487 KTVLSRKLAAHTPGFSGADISNVCNEAALIAARDANHEISNKHFEQAIERVVAGMEKKTQ 546
Query: 445 VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQ 504
V+ K E++TVAYHE+GHA+AGWFL+HA+PLLKV+I+PRG LG+AQY+P E L +K+Q
Sbjct: 547 VLQKEEKKTVAYHEAGHAIAGWFLQHADPLLKVSIIPRGKG-LGYAQYLPKEQYLYSKDQ 605
Query: 505 LFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDD 564
L D CMTLGGR AE++ G+I+TGAQ+DL+KVT+M Y+QV +G S+KVG LSF +
Sbjct: 606 LLDRMCMTLGGRVAEEIFFGRITTGAQDDLQKVTQMAYSQVVKFGMSEKVGPLSF-ETPA 664
Query: 565 TFEMT--KPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQD 622
EM KPYS T +ID EVR+ V A T L+ E R + ++A LLEKE+L+++
Sbjct: 665 PGEMAFDKPYSEATAQLIDQEVRDLVMNALRRTRDLLLEKRSDIERVALRLLEKEILNRE 724
Query: 623 DLVRVLGERPFKHSEPTNYDRFKKGF--LEDDKESKETKEGGTAEDDNSSSPLE 674
D++ ++G+RPF E Y+ G L+++ E + E E + E
Sbjct: 725 DMIELVGKRPFV--EKNTYEEMVSGTGGLDENVELPKGLENWNKESEKKKKDEE 776
Score = 82 (33.9 bits), Expect = 1.6e-156, Sum P(2) = 1.6e-156
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 11 ILCSLIVFLTCFTFSQISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNET 67
IL +L F+ ++ +IS++EF + LE GLV+R+ V +K ++ V S+ + +T
Sbjct: 132 ILLALYAFMDYQSYREISWKEFYSDFLEAGLVERLEVVDKRWVRI-VSSSGKYAGQT 187
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 1477 (525.0 bits), Expect = 3.9e-155, Sum P(2) = 3.9e-155
Identities = 320/598 (53%), Positives = 410/598 (68%)
Query: 89 KY-YFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALW 147
KY +F+IGSV++FE LE AQ LGI+P + V Y E + L PT LL G
Sbjct: 206 KYAWFSIGSVDTFERNLETAQWELGIEPPNQTAVVYTTESDG-TFLRSLVPTLLLIGIFL 264
Query: 148 FMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDK--VFFKDVAGCDEAKQEIM 205
+ R+ +F IG+ TI K+ KD V F DVAGC+EAK EIM
Sbjct: 265 YAMRR----GPMGAGRGGRGGRLFGIGE-TIAKI---IKDDIGVRFADVAGCEEAKLEIM 316
Query: 206 EFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMF 265
EFV+FLKNPK+Y++LGAKIPKGALL GPPGTGKTLLAKATAGE+GVPF++++GS+F+EMF
Sbjct: 317 EFVNFLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKATAGEAGVPFITVNGSEFLEMF 376
Query: 266 VGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDG 325
VGVGP+RVR +F AR+ AP I+F+DEIDAI + E+E+TLNQLLVEMDG
Sbjct: 377 VGVGPARVRDMFALARKNAPCILFVDEIDAIGRKRGRGHFGGQS-EQENTLNQLLVEMDG 435
Query: 326 FGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEP 385
F +T VVVLAGTNRPD+LD AL+RPGRFDRQI I PDIKGR IF+++L+ LKLD
Sbjct: 436 FNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYIGPPDIKGRSSIFRVHLRPLKLDESL 495
Query: 386 S--FYSQRLAALTPGF--AGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEK 441
S +++LAALTPGF +GADI+NVCNEAALIAAR+ + + +HFE AI+RVIGGLEK
Sbjct: 496 SKDALARKLAALTPGFTGSGADISNVCNEAALIAARHLNPSVGEKHFEQAIERVIGGLEK 555
Query: 442 KNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMT 501
K +V+ E+ TVAYHE+GHAV GWFLEHA+PLLKV+IVPRG LG+AQ +P E L T
Sbjct: 556 KTQVLQPGEKMTVAYHEAGHAVVGWFLEHADPLLKVSIVPRGKG-LGYAQCLPREQYLYT 614
Query: 502 KEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSF-- 559
+EQLFD C LGGR AEQ+ G+++TGAQ+DL KVT+ YAQ+ +G S+K+G +SF
Sbjct: 615 REQLFDRMCAMLGGRVAEQLFFGRVTTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDL 674
Query: 560 PQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVL 619
P+ + + KP+S T +ID EVR +G A+ T+ L+ RE V ++ LLEKEVL
Sbjct: 675 PRPGEAL-VEKPFSEATAQLIDEEVRRLIGSAHARTLDLLTRCREQVDKVGRRLLEKEVL 733
Query: 620 HQDDLVRVLGERPFKHSEPTNYDRFKKGF--LEDDK---ESKETKEGGTAEDDNSSSP 672
+ D+V +LG RPF +E Y+ +G LE+D E + GG + S +P
Sbjct: 734 ERADMVELLGPRPF--AEKVTYEELVEGTGGLEEDTALPEGLQGWRGGPTAGEPSLAP 789
Score = 57 (25.1 bits), Expect = 3.9e-155, Sum P(2) = 3.9e-155
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 26 QISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNETNDDFTQSPVNGSPDKRNL 85
+I+++ F L GLVDR+ V NK +V P ++ E F+ V+ +RNL
Sbjct: 167 EITWKHFVQYYLARGLVDRLEVVNKQFVRVI--PAPGTSLEKYAWFSIGSVDTF--ERNL 222
Query: 86 SQCKYYFNI 94
++ I
Sbjct: 223 ETAQWELGI 231
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 1501 (533.4 bits), Expect = 6.5e-154, P = 6.5e-154
Identities = 313/623 (50%), Positives = 410/623 (65%)
Query: 52 VAKVFVKSTPRSTNETNDDFTQSPVNGSPDKRNLSQCKYYFNIGSVESFEEKLEEAQEAL 111
V ++ V + R E N D SP YYF +GSVESFE KL++AQ L
Sbjct: 271 VERLTVTNRTRVRVELNRDAVARTYPDSPAAS--PNFYYYFTVGSVESFERKLDQAQFEL 328
Query: 112 GIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIF 171
GI + IPV+Y +EV W ++ F PT L G L+++ R+ S IF
Sbjct: 329 GIPTSERIPVSYVDEVPWMATVLSFGPTLLFMGGLFYLSRRAGSASAGRNG-------IF 381
Query: 172 NIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLV 231
IGK+ + + K+ F DVAG DEAK EIMEFV FLK+P+++++LGAKIP+GA+L
Sbjct: 382 GIGKSRARRFNHETDVKIKFSDVAGMDEAKVEIMEFVSFLKSPERFQKLGAKIPRGAILS 441
Query: 232 GPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFID 291
GPPGTGKTLLAKATAGESGVPF S+SGS+F+EMFVGVGPSRVR LF AR+ P I+FID
Sbjct: 442 GPPGTGKTLLAKATAGESGVPFFSVSGSEFVEMFVGVGPSRVRDLFANARKNTPCIIFID 501
Query: 292 EIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRP 351
EIDAI NDERESTLNQ+L EMDGF T+ VVVLAGTNRPD+LDKAL+RP
Sbjct: 502 EIDAIGKSRSAKNFSGGNDERESTLNQILTEMDGFNTSDQVVVLAGTNRPDVLDKALMRP 561
Query: 352 GRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEA 411
GRFDR I+ID+P + GR QIF+++LKK+ + + + RL+ALTPGFAGADIAN NEA
Sbjct: 562 GRFDRHISIDRPTMDGRKQIFRVHLKKIVTKEDMDYLTGRLSALTPGFAGADIANCVNEA 621
Query: 412 ALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHA 471
AL+AAR + +TM+HFE AI+RV+GGLEKK+ V+S E+RTVAYHE+GHA+ GW+ A
Sbjct: 622 ALVAARENAESVTMKHFERAIERVVGGLEKKSLVLSPEEKRTVAYHEAGHAICGWYFRWA 681
Query: 472 EPLLKVTIVPRGTAALGFAQYVP--NENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTG 529
+PLLKV+I+PRG ALG+AQY+P + LMT Q+ D MTLGGR +E++ +++G
Sbjct: 682 DPLLKVSIIPRGQGALGYAQYLPANGDTYLMTANQMMDRMAMTLGGRVSEELHFDTVTSG 741
Query: 530 AQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVG 589
A +D KVT++ A V +G S K+ + + + D + ++ KP+S +T ID EVR V
Sbjct: 742 ASDDFNKVTRLATAMVTKFGMSPKLKYIYY-EEDPSSQLHKPFSEETAKDIDIEVRRIVN 800
Query: 590 KAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHS-EPTNYDRFKKGF 648
+AY L+ ++ V +AEELL KEVL +DD+VR+LG R + S E Y K G
Sbjct: 801 EAYKQCRDLLTAKKKEVGLVAEELLAKEVLSRDDMVRLLGPREWPESGEFAKYFDGKHGQ 860
Query: 649 LEDDKESKETKEGGTAEDDNSSS 671
E + E G ++ SS
Sbjct: 861 TIAPPEPEVGPEAGPETRESPSS 883
Score = 219 (82.2 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 52/129 (40%), Positives = 78/129 (60%)
Query: 27 ISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNETNDDFTQSPVNGSPDKRNLS 86
I+++EF++K L+ GLV+R+ VTN++ +V V+ + T D SP SP+
Sbjct: 256 ITWEEFRSKFLDKGLVERLTVTNRT--RVRVELNRDAVARTYPD---SPA-ASPN----- 304
Query: 87 QCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGAL 146
YYF +GSVESFE KL++AQ LGI + IPV+Y +EV W ++ F PT L G L
Sbjct: 305 -FYYYFTVGSVESFERKLDQAQFELGIPTSERIPVSYVDEVPWMATVLSFGPTLLFMGGL 363
Query: 147 WFMGRKMQS 155
+++ R+ S
Sbjct: 364 FYLSRRAGS 372
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 1469 (522.2 bits), Expect = 1.6e-150, P = 1.6e-150
Identities = 317/593 (53%), Positives = 414/593 (69%)
Query: 91 YFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFMG 150
+FNIGSV++FE LE Q+ LGI+ + +PV Y E + L+ PTAL+ L +
Sbjct: 4 WFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG-SFLLSMLPTALIIAFLLYTI 62
Query: 151 RKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF 210
R+ + +F++G+ T K+ + D V FKDVAGC+EAK EIMEFV+F
Sbjct: 63 RRGPAGIGRSGRGMGG---LFSVGETT-AKVLKDEID-VKFKDVAGCEEAKLEIMEFVNF 117
Query: 211 LKNPKKYEELGAKIPK-GALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVG 269
LKNPK+Y++LGAKIPK GA+L GPPGTGKTLLAKATAGE+ VPF+++SGS+F+EMFVGVG
Sbjct: 118 LKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVG 177
Query: 270 PSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTT 329
P+RVR LF AR+ AP I+FIDEIDA+ + E+E+TLNQLLVEMDGF TT
Sbjct: 178 PARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQS-EQENTLNQLLVEMDGFNTT 236
Query: 330 AGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDN--EPSF 387
VV+LAGTNRPDILD ALLRPGRFDRQI I PDIKGR IF+++L+ LKLD+ E
Sbjct: 237 TNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEK 296
Query: 388 YSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVIS 447
+++LA+LTPGF+GAD+ANVCNEAALIAAR+ S I +HFE AI+RVIGGLEKK +V+
Sbjct: 297 LARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQ 356
Query: 448 KLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFD 507
E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG LG+AQY+P E L TKEQL D
Sbjct: 357 PEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQYLPKEQYLYTKEQLLD 415
Query: 508 MTCMTLGGRAA-EQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSF--PQRDD 564
CMT G + G+I+TGAQ+D KVT+ YAQ+ +G ++KVG +SF P++ D
Sbjct: 416 RMCMTPGWPCGPRKSSFGRITTGAQDD-RKVTQSAYAQIVQFGMNEKVGQISFDLPRQGD 474
Query: 565 TFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDL 624
+ KPYS T +ID+EVR + AY TV L+ E + V ++A LLEKEVL ++++
Sbjct: 475 MV-LEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNNM 533
Query: 625 VRVLGERPFKHSEPTNYDRFKKGF--LEDDKESKETKEGGTAEDDNSSSPLEP 675
V +LG RPF +E + Y+ F +G L++D E + E + S EP
Sbjct: 534 VELLGPRPF--AEKSTYEEFVEGTGSLDEDTSLPEGLKDWNREREGSGE--EP 582
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 1314 (467.6 bits), Expect = 4.2e-134, P = 4.2e-134
Identities = 281/591 (47%), Positives = 373/591 (63%)
Query: 90 YYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFM 149
Y + +++ FEEKL A+E L ID D IPVTY+ + L A+ LW++
Sbjct: 203 YRMQVANIDKFEEKLRAAEEELNIDAKDRIPVTYKRTGFFGNALYALGMAAIGVAILWYI 262
Query: 150 GRKMQSXXXXXXXXXXXXXXIFN-IGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFV 208
R FN + A T +D + V FKDVAG EAK E+ EFV
Sbjct: 263 FR------LAGMGGRDGGFSAFNQLKMAKFTIVDGKSGKGVSFKDVAGMREAKMEVKEFV 316
Query: 209 HFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGV 268
+LKNP +Y +LGAK+PKG+LL+GPPG GKTLLAKA A E+ VPFL+M+GS+F+E+ G+
Sbjct: 317 DYLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGL 376
Query: 269 GPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGT 328
G +RVRSLF+EAR AP IV+IDEIDA+ N E E TLNQLLVEMDG GT
Sbjct: 377 GAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTNMSGFSNTEEEQTLNQLLVEMDGMGT 436
Query: 329 TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFY 388
T V+VLA TNR DILD AL+RPGR DR I ID P ++ R +IF+ +LK LKL FY
Sbjct: 437 TDHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTLQERKEIFEQHLKILKLTQPADFY 496
Query: 389 SQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISK 448
S RLA LTPGF+GADIAN+CNEAAL AAR I FE A++RVI G KK+K++SK
Sbjct: 497 SLRLAELTPGFSGADIANICNEAALHAAREGFKSIDTFSFEYAVERVIAGSVKKSKILSK 556
Query: 449 LERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDM 508
E+R VA+HESGHA+ GW LEH E ++KV+I PR AALGFAQ +P + L TKEQLF+
Sbjct: 557 EEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQILPRDQFLFTKEQLFER 616
Query: 509 TCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEM 568
CM LGGRA+E + K++TGAQ+DL KVT++ Y+ V YG D VG +SFP ++ +
Sbjct: 617 MCMALGGRASEAITFNKVTTGAQDDLRKVTRVAYSMVKQYGMVDSVGQVSFPDSENQSGI 676
Query: 569 -TKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRV 627
+P+S +D E + + KAY HT KL+ ++R+ + +A LLE+EV++ +D+ +
Sbjct: 677 GRRPFSQGLQQQMDLEAKMLIAKAYRHTEKLLLDNRDKLILLANALLEREVVNYNDIEAL 736
Query: 628 LGERPF---KHSEPTNY---DRFKKGFLEDDKESKETKEGGTAEDDNSSSP 672
LG PF + P ++ +R + ED+ + +DD + SP
Sbjct: 737 LGPPPFGPKRMIAPQSWVEAERDLQDTGEDEPRRPQRPSKDNKDDDINLSP 787
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 1304 (464.1 bits), Expect = 4.8e-133, P = 4.8e-133
Identities = 270/593 (45%), Positives = 380/593 (64%)
Query: 90 YYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFM 149
Y + +++ FEEKL A++ L ID + IPV+Y++ + +++ T + LW +
Sbjct: 185 YTMRVANIDKFEEKLRAAEDELNIDERERIPVSYKHPGFYGNDVISLLVTLVAVSMLWSI 244
Query: 150 GRKMQSXXXXXXXXXXXXXXIFN-IGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFV 208
R ++ FN + A T +D + + FKDVAG EAK E+ EFV
Sbjct: 245 FRLIRVAGRAGGFNA------FNQLKMARFTIVDGKSGKGIGFKDVAGMHEAKMEVKEFV 298
Query: 209 HFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGV 268
+LKNP +Y +LGAK+PKGALL+GPPG GKTLLAKA A E+ VPFL+M+GS+F+E+ G+
Sbjct: 299 DYLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGL 358
Query: 269 GPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGT 328
G +RVRSLF+EA+ AP IV+IDEIDA+ N E E TLNQLLVEMDG GT
Sbjct: 359 GAARVRSLFREAQARAPCIVYIDEIDAVGKKRSTNVSGFANAEEEQTLNQLLVEMDGMGT 418
Query: 329 TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFY 388
T V+VLA TNR D+LD AL+RPGR DR I ID P ++ R +IF+ +LK LKL + SFY
Sbjct: 419 TDHVIVLASTNRADVLDNALMRPGRLDRHIFIDLPTLQERREIFEQHLKGLKLIQDASFY 478
Query: 389 SQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISK 448
SQ LA LTPGF+GADIAN+CNEAAL AAR I +FE A++RVI G K+NK++S
Sbjct: 479 SQHLAELTPGFSGADIANICNEAALHAAREGHKSIDTFNFEYAVERVIAGTAKRNKILSP 538
Query: 449 LERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDM 508
ER+ VA+HESGHA+ GW LEH E ++KV+I PR AALGFAQ +P E L TKEQL +
Sbjct: 539 EERKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQILPREQYLFTKEQLLER 598
Query: 509 TCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEM 568
CM LGGR +E + K++TGAQ+DL++VTK+ Y+ V YG +G +SFP + T +
Sbjct: 599 MCMALGGRVSEAITFNKVTTGAQDDLKRVTKIAYSMVKQYGMVPSIGQISFPDGESTVGI 658
Query: 569 -TKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRV 627
+P+S ++D+E + V +AY T KL+ ++R+ + ++ LLEKEV++ DD+ +
Sbjct: 659 GRRPFSQGLQQMMDHEAKVLVAQAYRRTEKLLLDNRDKLQTLSNALLEKEVINYDDIEAL 718
Query: 628 LGERPFKHSEPTNYDRFKKGFLEDDKESKETK-EGGTAEDDNSSSPLEPEVVP 679
+G P+ + + +L+ +++ ++T+ E + N EP + P
Sbjct: 719 IGPPPYGPKKMIA----PQSWLQAERDKQDTRDEEMPQQPPNHEEEEEPRLRP 767
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 1304 (464.1 bits), Expect = 4.8e-133, P = 4.8e-133
Identities = 292/623 (46%), Positives = 386/623 (61%)
Query: 23 TFSQISFQEFKNKLLEPGLVDRIVVT-NKSVAKVFVKSTPRSTNETNDDFTQSPVNGSPD 81
T +IS+ EF N+LL G V RI++ K VA ++ T N +
Sbjct: 134 TADKISWSEFINELLPTGQVYRIIILPEKDVAYLYCYDTGAK-------------NSRGE 180
Query: 82 KRNLSQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTAL 141
K L+ Y I SV FE ++ A+ ALG+ P + + Y N Q L
Sbjct: 181 K--LASM-YRVGIPSVARFETEVRAAEAALGLPPEHWTQIEYRRSENVAQWFTIIVLGGL 237
Query: 142 LFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKD--KVFFKDVAGCDE 199
L G + + RK + F I I + K K+ FKDVAGC E
Sbjct: 238 LLGG-FVLFRKFKGSFNMSDMMSNMTKGKFTI----IDPHSVEGKKQLKIKFKDVAGCSE 292
Query: 200 AKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGS 259
AK EI EFV +LKNP ++ +LGAK+P+GALL GPPG GKTLLAKA A ES VPF+SM+GS
Sbjct: 293 AKVEIREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMNGS 352
Query: 260 DFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX-----NDERES 314
+F+E+ G+G SR+R LF+EAR AP I++IDEIDAI + E E
Sbjct: 353 EFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGGGFGGGSGEEEQ 412
Query: 315 TLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQI 374
TLNQLLVEMDG G+ GVVVLA TNR D+LDKALLRPGRFDR I+ID P + R +F++
Sbjct: 413 TLNQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMFEL 472
Query: 375 YLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDR 434
Y++K+KLD+ P YSQRLAALTPGF GADI NVCNE+A+ AA N+ +T + E A+DR
Sbjct: 473 YMRKIKLDHAPQEYSQRLAALTPGFTGADIMNVCNESAIRAASNKCHVVTHKDMEYALDR 532
Query: 435 VIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP 494
V+ G EK+++ + + ER VAYHE+GHA+ GW LEH + LLKVTI+PR +AALGFAQY P
Sbjct: 533 VLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKVTIIPRTSAALGFAQYSP 592
Query: 495 NENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKV 554
+ L +K++LFD CM LGGR AE + G+ ++GAQ+DL+KVTK YAQV +YG S V
Sbjct: 593 RDKHLFSKDELFDRMCMMLGGRCAENLKFGRATSGAQDDLQKVTKSAYAQVKLYGMSSIV 652
Query: 555 GLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELL 614
G LSFP + F++ KPYS K + D E V KA + T LI+ + + + IA+ LL
Sbjct: 653 GPLSFPNTEG-FQI-KPYSKKFASTFDQEATLIVAKANEATTDLIKNNMDKLETIAQALL 710
Query: 615 EKEVLHQDDLVRVLGERPF--KH 635
++EVL+ +D+ +++G F KH
Sbjct: 711 KREVLNYEDVKKLIGTPKFGDKH 733
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 1303 (463.7 bits), Expect = 6.2e-133, P = 6.2e-133
Identities = 275/589 (46%), Positives = 382/589 (64%)
Query: 83 RNLSQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALL 142
R +S ++ + FEEKL + ++ LGI D +PVTY+ + + ++ L+
Sbjct: 241 RKVSSTIFHMAVADANKFEEKLRDVEKRLGIK--DGVPVTYDRQTDTTGRILMLL---LV 295
Query: 143 FGALWFMGRKMQSXXXXXXXXXXXXXXIFN-IGKATITKMD-MNAKDKVFFKDVAGCDEA 200
L + +M+S FN +G+A T +D + V F+DVAG EA
Sbjct: 296 CALLMSIATRMKSIKSPLSMDS------FNQMGRAKFTLVDPFDGGRGVLFRDVAGLSEA 349
Query: 201 KQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSD 260
KQE+ EFV +LK+P+KY+ LGAK+P+GALL+GPPG GKTLLAKA A E+ VPFLSM+GS+
Sbjct: 350 KQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSE 409
Query: 261 FMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX--XNDERESTLNQ 318
F+EM G+G +RVR LF+E ++ AP I++IDEIDAI + E E TLNQ
Sbjct: 410 FIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGSSGESEQTLNQ 469
Query: 319 LLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKK 378
LLVEMDG T GV++LA TNR DILDKALLRPGRFDR I ID P + R +IF+ +L
Sbjct: 470 LLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIFEKHLSS 529
Query: 379 LKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGG 438
+KL++ P+ +SQRLA LTPGF+GADIANVCNEAAL AARN +++ ++ E A++R++GG
Sbjct: 530 VKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNLEYAVERLVGG 589
Query: 439 LEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL 498
EK++ +S ER+ +AYHESGHA+ GW L +++ LLKVTIVPR + ALGFAQY P+E
Sbjct: 590 TEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSLALGFAQYTPSEQH 649
Query: 499 LMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLS 558
L +KE+LFD CM LGGRAAE ++ +I+TGAQNDLEKVTK+ Y+Q+ +G +D +G +
Sbjct: 650 LYSKEELFDKMCMALGGRAAENLVFNRITTGAQNDLEKVTKIAYSQIKKFGMNDTLGPIY 709
Query: 559 FPQRDDTF---EM----TKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAE 611
D+T M KP+S ++IDNE R V AY T ++ HR+ + ++AE
Sbjct: 710 VRDADETEGGGAMGSGGKKPFSRAMESMIDNEARHVVASAYQTTEGILTTHRDKLEKLAE 769
Query: 612 ELLEKEVLHQDDLVRVLGERPF----KHSEPTNYDRFKKGFLEDDKESK 656
LLEKE L D +V+++G P+ + E +++ K D +K
Sbjct: 770 ALLEKETLDYDQVVQLIGPPPYDLGKRQVESVEFEQSLKNLSTDTDATK 818
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
Identities = 270/587 (45%), Positives = 371/587 (63%)
Query: 90 YYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFM 149
Y + +++ FEEKL A++ L I+ D IPV+Y+ + L TA+ LW++
Sbjct: 212 YRMQVANIDRFEEKLRAAEDMLNIEGKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYV 271
Query: 150 GRKMQSXXXXXXXXXXXXXXIFN-IGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFV 208
R FN + A T +D V FKDVAG EAK E+ EFV
Sbjct: 272 FR------LAGMTGREGGLSAFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVKEFV 325
Query: 209 HFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGV 268
+LK+P+++ +LGAK+PKGALL+GPPG GKTLLAKA A E+ VPFL+M+G +F+E+ G+
Sbjct: 326 DYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGL 385
Query: 269 GPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGT 328
G +RVRSLF+EAR AP IV+IDEIDA+ N E E TLNQLLVEMDG GT
Sbjct: 386 GAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGT 445
Query: 329 TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFY 388
T V+VLA TNR DILD ALLRPGR DR + ID P ++ R +IF+ +LK LKL SFY
Sbjct: 446 TDHVIVLASTNRADILDNALLRPGRLDRHVFIDLPTLQERREIFEHHLKSLKLTQASSFY 505
Query: 389 SQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISK 448
SQRLA LTPGF+GADIAN+CNEAAL AAR + +FE A++RVI G KK+K++SK
Sbjct: 506 SQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFEYAVERVIAGTAKKSKILSK 565
Query: 449 LERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDM 508
E++ VA+HESGHA+ GW LEH E ++KV+I PR AALGFAQ +P + L TKEQLF+
Sbjct: 566 EEQKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQMLPRDQHLFTKEQLFER 625
Query: 509 TCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDD--TF 566
CM LGGR +E + K+++GAQ+DL KVT++ Y+ V +G + +G +SFP+ + T
Sbjct: 626 MCMALGGRVSETISFNKVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPISFPEVQEGLTG 685
Query: 567 EMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVR 626
+P+S ++D+E + V KAY HT K+++++ + + +A LLEKEV++ +D+
Sbjct: 686 IGRRPFSQGLQQMMDHEAKLLVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEA 745
Query: 627 VLGERPFKHSEPTNYDRFKKGFLE-DDKESKETKEGGTAEDDNSSSP 672
++G P + R+ + E D +E + D S P
Sbjct: 746 LIGPPPHGPKKMIAPQRWSEAEREKQDAGEEEAPQQPPLRGDEPSWP 792
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 1278 (454.9 bits), Expect = 2.8e-130, P = 2.8e-130
Identities = 268/583 (45%), Positives = 375/583 (64%)
Query: 90 YYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFM 149
Y + +++ FEEKL A++ L I+ D IPV+Y+ + L TA+ LW++
Sbjct: 212 YRMQVANIDKFEEKLRAAEDELNIEAKDRIPVSYKRTGFFGNALYSVGMTAVGLAILWYV 271
Query: 150 GRKMQSXXXXXXXXXXXXXXIFN-IGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFV 208
R FN + A T +D V FKDVAG EAK E+ EFV
Sbjct: 272 FR------LAGMTGREGGFSAFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVREFV 325
Query: 209 HFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGV 268
+LK+P+++ +LGAK+PKGALL+GPPG GKTLLAKA A E+ VPFL+M+G +F+E+ G+
Sbjct: 326 DYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGL 385
Query: 269 GPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGT 328
G +RVRSLF+EAR AP IV+IDEIDA+ N E E TLNQLLVEMDG GT
Sbjct: 386 GAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGT 445
Query: 329 TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFY 388
T V+VLA TNR DILD AL+RPGR DR + ID P ++ R +IF+ +LK LKL +FY
Sbjct: 446 TDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFY 505
Query: 389 SQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISK 448
SQRLA LTPGF+GADIAN+CNEAAL AAR + +FE A++RV+ G KK+K++SK
Sbjct: 506 SQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILSK 565
Query: 449 LERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDM 508
E++ VA+HESGHA+ GW LEH E ++KV+I PR AALGFAQ +P + L TKEQLF+
Sbjct: 566 EEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTKEQLFER 625
Query: 509 TCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEM 568
CM LGGRA+E + ++++GAQ+DL KVT++ Y+ V +G + +G +SFP+ +
Sbjct: 626 MCMALGGRASEALSFNEVTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPEAQEGLMG 685
Query: 569 T--KPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVR 626
+P+S ++D+E R V KAY HT K+++++ + + +A LLEKEV++ +D+
Sbjct: 686 IGRRPFSQGLQQMMDHEARLLVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEA 745
Query: 627 VLGERPF---KHSEPTNY---DRFKKGFLEDD-KESKETKEGG 662
++G P K P + R K+ E++ +E+++ GG
Sbjct: 746 LIGPPPHGPKKMIAPQRWIDAQREKQDLGEEETEETQQPPLGG 788
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 1278 (454.9 bits), Expect = 2.8e-130, P = 2.8e-130
Identities = 260/546 (47%), Positives = 358/546 (65%)
Query: 90 YYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFM 149
Y + +++ FEEKL A++ L I+ D IPV+Y+ + L TA+ LW++
Sbjct: 212 YRMQVANIDKFEEKLRAAEDELNIESKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYV 271
Query: 150 GRKMQSXXXXXXXXXXXXXXIFN-IGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFV 208
R FN + A T +D V F+DVAG EAK E+ EFV
Sbjct: 272 FR------LAGMTGREGGFSAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFV 325
Query: 209 HFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGV 268
+LK+P+++ +LGAK+PKGALL+GPPG GKTLLAKA A E+ VPFL+M+G +F+E+ G+
Sbjct: 326 DYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGL 385
Query: 269 GPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGT 328
G +RVRSLF+EAR AP IV+IDEIDA+ N E E TLNQLLVEMDG GT
Sbjct: 386 GAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGT 445
Query: 329 TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFY 388
T V+VLA TNR D+LD AL+RPGR DR + ID P ++ R +IF+ +LK LKL SFY
Sbjct: 446 TDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFY 505
Query: 389 SQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISK 448
SQRLA LTPGF+GADIAN+CNEAAL AAR + +FE A++RVI G KK+K++SK
Sbjct: 506 SQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFEYAVERVIAGTAKKSKILSK 565
Query: 449 LERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDM 508
E+R VA+HESGHA+ GW LEH E ++KV+I PR AALGF+Q +P + L TKEQLF+
Sbjct: 566 EEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQLFER 625
Query: 509 TCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEM 568
CM LGGRAAE + ++++GAQ+DL KVT++ Y+ V +G + +G +SFP+ +
Sbjct: 626 MCMALGGRAAEAISFSRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEGLMG 685
Query: 569 T--KPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVR 626
+P+S ++D+E + V KAY HT K++ ++ + + +A LLEKEV++ +D+
Sbjct: 686 IGRRPFSQGLQQMMDHEAKLLVAKAYRHTEKVLLDNLDKLQALANALLEKEVINYEDIEA 745
Query: 627 VLGERP 632
++G P
Sbjct: 746 LIGPPP 751
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
Identities = 265/575 (46%), Positives = 366/575 (63%)
Query: 90 YYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFM 149
Y + +++ FEEKL A++ L I+ D IPV+Y+ + L TA+ LW++
Sbjct: 212 YRMQVANIDKFEEKLRAAEDELNIEGKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYV 271
Query: 150 GRKMQSXXXXXXXXXXXXXXIFN-IGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFV 208
R FN + A T +D V FKDVAG EAK E+ EFV
Sbjct: 272 FR------LAGMTGREGGFSAFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVKEFV 325
Query: 209 HFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGV 268
+LK+P+++ +LGAK+PKGALL+GPPG GKTLLAKA A E+ VPFL+M+G +F+E+ G+
Sbjct: 326 DYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGL 385
Query: 269 GPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGT 328
G +RVRSLF+EAR AP IV+IDEIDA+ N E E TLNQLLVEMDG GT
Sbjct: 386 GAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTAVSGFSNTEEEQTLNQLLVEMDGMGT 445
Query: 329 TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFY 388
T V+VLA TNR DILD ALLRPGR DR + ID P ++ R +IF+ +LK LKL SFY
Sbjct: 446 TDHVIVLAATNRADILDNALLRPGRLDRHVFIDLPTLQERKEIFEQHLKSLKLTRASSFY 505
Query: 389 SQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISK 448
SQRLA LTPGF+GADIAN+CNEAAL AAR + + + A++RV+ G KK+KV+SK
Sbjct: 506 SQRLAELTPGFSGADIANICNEAALHAAREGHTAVHTSNLDYAVERVVAGTAKKSKVLSK 565
Query: 449 LERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDM 508
E++ VA+HESGHA+ GW LEH E ++KV+I PR AALGFAQ +P + L T+EQLF+
Sbjct: 566 EEQKVVAFHESGHALVGWLLEHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTREQLFER 625
Query: 509 TCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDD--TF 566
CM LGGRA+E + ++++GAQ+DL KVT++ Y+ V +G + +G +SFP+ + T
Sbjct: 626 MCMALGGRASESISFNRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEGVTG 685
Query: 567 EMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVR 626
+P+S +ID+E R V AY HT +++ ++ + + +A LLEKEV++ +D+
Sbjct: 686 IGRRPFSQGLQQMIDHEARLLVATAYRHTEQVLRDNLDKLHALASALLEKEVINYEDIEA 745
Query: 627 VLGERPFKHSEPTNYDRFKKGFLEDDKESKETKEG 661
++G P H K + +K+ +EG
Sbjct: 746 LIGPPP--HGPKKKIAPQKWSDAQREKQDSGEEEG 778
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 722 (259.2 bits), Expect = 4.7e-118, Sum P(2) = 4.7e-118
Identities = 161/350 (46%), Positives = 215/350 (61%)
Query: 90 YYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFM 149
Y + +++ FEEKL A++ L I+ D IPV+Y+ + L TA+ LW++
Sbjct: 212 YRMQVANIDKFEEKLRAAEDELNIESKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYV 271
Query: 150 GRKMQSXXXXXXXXXXXXXXIFN-IGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFV 208
R FN + A T +D V F+DVAG EAK E+ EFV
Sbjct: 272 FR------LAGMTGREGGFSAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFV 325
Query: 209 HFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGV 268
+LK+P+++ +LGAK+PKGALL+GPPG GKTLLAKA A E+ VPFL+M+G +F+E+ G+
Sbjct: 326 DYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGL 385
Query: 269 GPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGT 328
G +RVRSLF+EAR AP IV+IDEIDA+ N E E TLNQLLVEMDG GT
Sbjct: 386 GAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGT 445
Query: 329 TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFY 388
V+VLA TNR D+LD AL+RPGR DR + ID P ++ R +IF+ +LK LKL SFY
Sbjct: 446 ADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFY 505
Query: 389 SQRLAALTPGFAG-ADIANVCN-EAALIAARNESAQIT----MQHFEAAI 432
SQRLA LTPGF+G A + + + E + A +ES ++H EA +
Sbjct: 506 SQRLAELTPGFSGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVM 555
Score = 461 (167.3 bits), Expect = 4.7e-118, Sum P(2) = 4.7e-118
Identities = 92/225 (40%), Positives = 146/225 (64%)
Query: 438 GLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN 497
G KK+K++SK E+R VA+HESGHA+ GW LEH E ++KV+I PR AALGF+Q +P +
Sbjct: 518 GTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQ 577
Query: 498 LLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLL 557
L TKEQLF+ CM LGGRAAE + ++++GAQ+DL KVT++ Y+ V +G + +G +
Sbjct: 578 YLFTKEQLFERMCMALGGRAAEAISFSRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPV 637
Query: 558 SFPQRDDTFEMT--KPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLE 615
SFP+ + +P+S ++D+E R V +AY HT K++ ++ + + +A LLE
Sbjct: 638 SFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLDKLQALANALLE 697
Query: 616 KEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGFLEDDKESKETKE 660
KEV++ +D+ ++G P H P +K +++ +KE + + E
Sbjct: 698 KEVINYEDIEALIGPPP--HG-PKKMIAPQK-WIDAEKEKQASGE 738
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 722 (259.2 bits), Expect = 4.7e-118, Sum P(2) = 4.7e-118
Identities = 161/350 (46%), Positives = 215/350 (61%)
Query: 90 YYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENEVNWYQELMRFAPTALLFGALWFM 149
Y + +++ FEEKL A++ L I+ D IPV+Y+ + L TA+ LW++
Sbjct: 212 YRMQVANIDKFEEKLRAAEDELNIESKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYV 271
Query: 150 GRKMQSXXXXXXXXXXXXXXIFN-IGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFV 208
R FN + A T +D V F+DVAG EAK E+ EFV
Sbjct: 272 FR------LAGMTGREGGFSAFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFV 325
Query: 209 HFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGV 268
+LK+P+++ +LGAK+PKGALL+GPPG GKTLLAKA A E+ VPFL+M+G +F+E+ G+
Sbjct: 326 DYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGL 385
Query: 269 GPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGT 328
G +RVRSLF+EAR AP IV+IDEIDA+ N E E TLNQLLVEMDG GT
Sbjct: 386 GAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGT 445
Query: 329 TAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFY 388
V+VLA TNR D+LD AL+RPGR DR + ID P ++ R +IF+ +LK LKL SFY
Sbjct: 446 ADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFY 505
Query: 389 SQRLAALTPGFAG-ADIANVCN-EAALIAARNESAQIT----MQHFEAAI 432
SQRLA LTPGF+G A + + + E + A +ES ++H EA +
Sbjct: 506 SQRLAELTPGFSGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVM 555
Score = 461 (167.3 bits), Expect = 4.7e-118, Sum P(2) = 4.7e-118
Identities = 92/225 (40%), Positives = 146/225 (64%)
Query: 438 GLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN 497
G KK+K++SK E+R VA+HESGHA+ GW LEH E ++KV+I PR AALGF+Q +P +
Sbjct: 518 GTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQ 577
Query: 498 LLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLL 557
L TKEQLF+ CM LGGRAAE + ++++GAQ+DL KVT++ Y+ V +G + +G +
Sbjct: 578 YLFTKEQLFERMCMALGGRAAEAISFSRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPV 637
Query: 558 SFPQRDDTFEMT--KPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLE 615
SFP+ + +P+S ++D+E R V +AY HT K++ ++ + + +A LLE
Sbjct: 638 SFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLDKLQALANALLE 697
Query: 616 KEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGFLEDDKESKETKE 660
KEV++ +D+ ++G P H P +K +++ +KE + + E
Sbjct: 698 KEVINYEDIEALIGPPP--HG-PKKMIAPQK-WIDAEKEKQASGE 738
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 1136 (405.0 bits), Expect = 3.1e-115, P = 3.1e-115
Identities = 259/632 (40%), Positives = 369/632 (58%)
Query: 52 VAKVFVKSTPRSTNETNDDFTQSPVNGSPDKRNLSQCKYYFNI-GSVESFEEK---LEEA 107
V F S P++ N + F ++ +G D ++ + + + G ++++++ L
Sbjct: 21 VVSYFQTSNPKTENMSYSTFIKNLDDGKVDSVSVQPVRGVYEVKGQLKNYDKDQYFLTHV 80
Query: 108 QEALGIDP------HDYIPVTYENEVN-WYQELMRFAPTALLFGALWFMGRKMQSXXXXX 160
E G D + V E + W L P ++F +F+ + Q
Sbjct: 81 PEGKGADQIFNALKKTDVKVEPAQETSGWVTFLTTIIPFVIIFILFFFLLNQAQGGGSR- 139
Query: 161 XXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL 220
+ N GK+ K+ K +V FKDVAG DE KQE++E V FLK+P+K+ EL
Sbjct: 140 ---------VMNFGKSK-AKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAEL 189
Query: 221 GAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEA 280
GA+IPKG LLVGPPGTGKTLLAKA AGE+GVPF S+SGSDF+EMFVGVG SRVR LF+ A
Sbjct: 190 GARIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA 249
Query: 281 RQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNR 340
++ AP ++FIDEIDA+ +DERE TLNQLLVEMDGF G++++A TNR
Sbjct: 250 KKNAPCLIFIDEIDAVGRQRGAGLGGG-HDEREQTLNQLLVEMDGFSANEGIIIIAATNR 308
Query: 341 PDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFA 400
DILD ALLRPGRFDRQIT+D+PD+ GR+ + +++ + LD + S +A TPGF+
Sbjct: 309 ADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKS--IAMRTPGFS 366
Query: 401 GADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESG 460
GAD+ N+ NEAAL+AAR +I + + A DRVI G KK++VISK ER VAYHE G
Sbjct: 367 GADLENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGG 426
Query: 461 HAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAE 519
H V G L+ A+ + KVTIVPRG A G+A +P E+ TK +L D LGGR AE
Sbjct: 427 HTVIGLVLDEADMVHKVTIVPRGQAG-GYAVMLPREDRYFQTKPELLDKIVGLLGGRVAE 485
Query: 520 QVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDD-------TFEMTKPY 572
+++ G++STGA ND ++ T + V +G S+K+G L F Q F + Y
Sbjct: 486 EIIFGEVSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNY 545
Query: 573 SSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVL--GE 630
S + ID E++ + + Y+ +++ E+R+ + IA+ LL+ E L + + ++ G
Sbjct: 546 SDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHGT 605
Query: 631 RPFKH-SEPTNYDRFKKGFLEDDKESKE-TKE 660
P ++ S+ D K L +E K+ TKE
Sbjct: 606 LPERNFSDDEKNDDVKVNILTKTEEKKDDTKE 637
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
Identities = 237/509 (46%), Positives = 325/509 (63%)
Query: 129 WYQELMRFAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDK 188
W L P L+ G +F ++ Q + + GK+ K+ + K +
Sbjct: 106 WANLLSSLLPVLLMVGLFFFFMQQAQGGGNR----------VMSFGKSR-AKLHTDEKKR 154
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F DVAG DE K+E+ E V FLKNP+KY ELGA+IPKG LL G PGTGKTLLA+A AGE
Sbjct: 155 VTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+GVPF S+SGSDF+EMFVGVG SRVR LF++A++ AP IVFIDEIDA+
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGG- 273
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+DERE TLNQLLVEMDGF + G++++A TNRPDILD ALLRPGRFDR I +D PDI GR
Sbjct: 274 HDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGR 333
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I ++++K L ++ LA TPGF GAD+AN+ NEAAL+AAR I M+
Sbjct: 334 KEILKVHVKGKPLGDDVDL--DVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEM 391
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
E AI+RVI G EKK+KVIS+ E+R VAYHE+GHA+ G+ L H +P+ K++I+PRG A G
Sbjct: 392 EEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPVHKISIIPRGRAG-G 450
Query: 489 FAQYVPNENL-LMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAV 547
+ +P E+ MTK QL D M LGGR AE ++L ISTGA+NDLE+ T+ V
Sbjct: 451 YTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVLEDISTGARNDLERATETARRMVME 510
Query: 548 YGFSDKVGLLSFPQRDDTFEMTKP------YSSKTGAIIDNEVREWVGKAYDHTVKLIEE 601
YG S+++G L+F + + + + YS + ID EVR+ + Y +++++
Sbjct: 511 YGMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRKIIDSCYSRAEEILKK 570
Query: 602 HREHVAQIAEELLEKEVLHQDDLVRVLGE 630
+ + +A +L+E E + ++ +++ E
Sbjct: 571 NINVLHLVATKLMEVETMEGEEFEKLMKE 599
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
Identities = 237/509 (46%), Positives = 325/509 (63%)
Query: 129 WYQELMRFAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDK 188
W L P L+ G +F ++ Q + + GK+ K+ + K +
Sbjct: 106 WANLLSSLLPVLLMVGLFFFFMQQAQGGGNR----------VMSFGKSR-AKLHTDEKKR 154
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F DVAG DE K+E+ E V FLKNP+KY ELGA+IPKG LL G PGTGKTLLA+A AGE
Sbjct: 155 VTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+GVPF S+SGSDF+EMFVGVG SRVR LF++A++ AP IVFIDEIDA+
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGG- 273
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+DERE TLNQLLVEMDGF + G++++A TNRPDILD ALLRPGRFDR I +D PDI GR
Sbjct: 274 HDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGR 333
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I ++++K L ++ LA TPGF GAD+AN+ NEAAL+AAR I M+
Sbjct: 334 KEILKVHVKGKPLGDDVDL--DVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEM 391
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
E AI+RVI G EKK+KVIS+ E+R VAYHE+GHA+ G+ L H +P+ K++I+PRG A G
Sbjct: 392 EEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPVHKISIIPRGRAG-G 450
Query: 489 FAQYVPNENL-LMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAV 547
+ +P E+ MTK QL D M LGGR AE ++L ISTGA+NDLE+ T+ V
Sbjct: 451 YTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVLEDISTGARNDLERATETARRMVME 510
Query: 548 YGFSDKVGLLSFPQRDDTFEMTKP------YSSKTGAIIDNEVREWVGKAYDHTVKLIEE 601
YG S+++G L+F + + + + YS + ID EVR+ + Y +++++
Sbjct: 511 YGMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRKIIDSCYSRAEEILKK 570
Query: 602 HREHVAQIAEELLEKEVLHQDDLVRVLGE 630
+ + +A +L+E E + ++ +++ E
Sbjct: 571 NINVLHLVATKLMEVETMEGEEFEKLMKE 599
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 262/632 (41%), Positives = 367/632 (58%)
Query: 52 VAKVFVKSTPRSTNETNDDFTQSPVNGS------PDKRNLSQCKYYFNIGSV-ESF---E 101
+ F ST ++T+ + D F G K + + K FN S E F
Sbjct: 21 IVSYFNGSTQKTTSVSYDKFITKLEKGEVRNVQLQPKNGVFEVKGQFNNSSQGEQFVTYA 80
Query: 102 EKLEEAQEALGIDPHDYIPVTYE--NEVN-WYQELMRFAPTALLFGALWFMGRKMQSXXX 158
EE Q+ + D V Y+ E + W P ++F +F+ + Q
Sbjct: 81 PNTEELQKKIN-DKAQGAEVKYQPAEETSAWVTFFTSIIPFVIIFILFFFLLNQAQGGGS 139
Query: 159 XXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYE 218
+ N GK+ K+ + K KV F+DVAG DE KQE++E V FLK+P+K+
Sbjct: 140 R----------VMNFGKSK-AKLYNDEKKKVRFRDVAGADEEKQELVEVVEFLKDPRKFA 188
Query: 219 ELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQ 278
E+GA+IPKG LLVGPPGTGKTLLA+A AGE+GVPF S+SGSDF+EMFVGVG SRVR LF+
Sbjct: 189 EVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFE 248
Query: 279 EARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGT 338
A++ AP I+FIDEIDA+ +DERE TLNQLLVEMDGFG G++++A T
Sbjct: 249 NAKKNAPCIIFIDEIDAVGRQRGAGLGGG-HDEREQTLNQLLVEMDGFGANEGIIIIAAT 307
Query: 339 NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPG 398
NRPDILD ALLRPGRFDRQIT+D+PD+ GR+ + +++ + LD + + +A TPG
Sbjct: 308 NRPDILDPALLRPGRFDRQITVDRPDVNGREAVLKVHARNKPLDENINL--RAIATRTPG 365
Query: 399 FAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHE 458
F+GAD+ N+ NEAAL+AAR + +I M + A DRVI G KK++VIS+ ER VA+HE
Sbjct: 366 FSGADLENLLNEAALVAARQDKKKIDMSDIDEATDRVIAGPAKKSRVISEKERNIVAFHE 425
Query: 459 SGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRA 517
+GH V G L+ A+ + KVTIVPRG A G+A +P E+ MTK +L D LGGR
Sbjct: 426 AGHTVIGVVLDEADVVHKVTIVPRGQAG-GYAVMLPKEDRYFMTKPELLDKITGLLGGRV 484
Query: 518 AEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDD-------TFEMTK 570
AE+++ G++STGA ND ++ T + V +G SDK+G + F F +
Sbjct: 485 AEEIVFGEVSTGAHNDFQRATGIARRMVTEFGMSDKLGPMQFGSSQGGQVFLGRDFHSEQ 544
Query: 571 PYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRV--- 627
YS ID E++ + + Y +++ ++R+ + IA+ LLE E L + + +
Sbjct: 545 NYSDAIAHEIDMEMQTIMKECYARAKQILTDNRDKLDLIAKTLLEVETLDAEQINHLCDY 604
Query: 628 --LGERPFKHSEPTNYDRFKKGFLEDDKESKE 657
L ERP ++ KK DD+ES++
Sbjct: 605 GRLPERPTSSADVKVNINMKK----DDEESED 632
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 236/531 (44%), Positives = 333/531 (62%)
Query: 125 NEVNWYQELMRFA---PTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKM 181
+E NW+ +++ F+ P + FG F+ +MQ I IG + K+
Sbjct: 120 SETNWFTDIL-FSWVLPVFIFFGIWMFLASRMQKNMGSS---------ILGIGSSK--KL 167
Query: 182 DMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLL 241
+ K KV F DVAG +EAK+E+ E V FLK P++Y +LGAKIPKG LLVGPPGTGKTLL
Sbjct: 168 VNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVGPPGTGKTLL 227
Query: 242 AKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXX 301
AKA AGE+ VPF S+SGS F+EMFVGVG SRVR LF+ A++ AP+IVFIDEIDAI
Sbjct: 228 AKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIGKSRA 287
Query: 302 XXXXXXXNDERESTLNQLLVEMDGFGTTAG-VVVLAGTNRPDILDKALLRPGRFDRQITI 360
NDERE TLNQLL EMDGFGT + V+VLA TNRP++LD ALLRPGRFDRQ+ +
Sbjct: 288 ASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDRQVLV 347
Query: 361 DKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNES 420
DKPD KGR I ++++K +K+ P + +A LT G AGAD+AN+ NEAAL+A R+
Sbjct: 348 DKPDFKGRCDILKVHMKDVKIS--PKVKVEDIARLTAGLAGADLANIINEAALLAGRDSK 405
Query: 421 AQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 480
+ A++R I GLEKK++ I++ E++ V YHE GHA+ + A+ + KV+++
Sbjct: 406 KYVEQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIAETTKGAKRVSKVSVI 465
Query: 481 PRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTK 539
PRG AALG+ P EN LM K +L + LGGRAAE+V +G+ISTGA NDLE+ T
Sbjct: 466 PRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEVFIGEISTGASNDLERATD 525
Query: 540 MTYAQVAVYGFSDKVGLLSFPQRDDTF----EMTKPYSSKTGAIIDNEVREWVGKAYDHT 595
+ A +++YG S+ GL+ ++ +TF + K YS K +D+ V++ + + Y
Sbjct: 526 IIKAMISMYGMSEIAGLMVLEKQRNTFLSGGQTIKDYSEKMAESLDDYVKKTLDERYKDV 585
Query: 596 VKLIEEHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKK 646
+ ++ + + L E+E + + + ++ E ++S PT ++
Sbjct: 586 KDTLNTYKGAIETMVAALYEEETIEGNKVREIIKEFEDQNSLPTRLQELEE 636
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 1069 (381.4 bits), Expect = 3.4e-111, Sum P(2) = 3.4e-111
Identities = 236/533 (44%), Positives = 334/533 (62%)
Query: 133 LMRFAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFK 192
L+ + P LL G F ++MQ+ F KA + + +KV F
Sbjct: 109 LISWFPMLLLIGVWIFFMKQMQAGGNKTMT--------FGKSKARLLS---DRSNKVTFH 157
Query: 193 DVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 252
DVAG DEAK+E+ E V FL+ PKK+++LG KIPKG LL+GPPGTGKTLLAKA AGE+ VP
Sbjct: 158 DVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEAKVP 217
Query: 253 FLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDER 312
F S+SGSDF+EMFVGVG SRVR +F++ ++ AP ++FIDEIDA+ NDER
Sbjct: 218 FFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGG-NDER 276
Query: 313 ESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 372
E TLNQLLVEMDGF GV+++A TNRPD+LD ALLRPGRFDRQITI PDI GR +I
Sbjct: 277 EQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQKIL 336
Query: 373 QIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAI 432
+++LKK+ P+ +A TPGF+GAD+AN+ NE+ALIAAR +T + FE A
Sbjct: 337 EVHLKKIP--TAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVTNEDFEYAR 394
Query: 433 DRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQY 492
D+++ G+E+K+ V+ + E+ AYHE+GHA+ LE ++P+ K TI+PRG A LG
Sbjct: 395 DKILMGMERKSLVMREEEKLLTAYHEAGHAITSLKLEASDPIHKATIIPRGRA-LGLVMR 453
Query: 493 VP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYG 549
+P ++ + T+ ++ + +GGRAAEQV+ G K ++GA +D+++ T + + V +G
Sbjct: 454 LPEHDRVSFTRAKMHADLIVAMGGRAAEQVIFGDDKTTSGAASDIKQATHLARSMVTKWG 513
Query: 550 FSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQI 609
S+KVG L + +++D S + +ID+EV++ V A K++ E+ E + ++
Sbjct: 514 MSEKVGPLLYGEQNDPNNHI--LSIEMSNLIDSEVKQLVTDALKEATKILNENIESLHRV 571
Query: 610 AEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGFL--EDDKESKETKE 660
A+ LLE E L +L +L + F P + K L EDD KET E
Sbjct: 572 AKALLEYETLTGQELSDLLEGKSFLKKAPDDKKVVSKSSLDVEDDTVDKETLE 624
Score = 49 (22.3 bits), Expect = 3.4e-111, Sum P(2) = 3.4e-111
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 26 QISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNET 67
+I F EF + L+E G V +IV+ ++ V T T T
Sbjct: 37 KIQFSEFLD-LVEKGEVQKIVIEGYDISGVLKSGTHFYTKAT 77
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 1082 (385.9 bits), Expect = 1.6e-109, P = 1.6e-109
Identities = 224/512 (43%), Positives = 333/512 (65%)
Query: 124 ENEVNWYQELMRFAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDM 183
E +V+W+ + + P L G F R+MQ GK+ K+
Sbjct: 96 EEKVSWFSIFISWFPLLFLVGVWIFFMRQMQGGGGKAMA----------FGKSR-AKLLT 144
Query: 184 NAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAK 243
A+ +V F+DVAG DEAK+E+ E + FLK+PKK+ +LG +IPKG LLVGPPGTGKTLLA+
Sbjct: 145 EAQGRVTFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLAR 204
Query: 244 ATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXX 303
A AGE+GVPF S+SGSDF+EMFVGVG SRVR LF + ++ AP I+FIDEIDA+
Sbjct: 205 AVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGAG 264
Query: 304 XXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKP 363
+DERE TLNQLLVEMDGF + GV+++A TNRPD+LD ALLRPGRFDRQ+ + +P
Sbjct: 265 LGGG-HDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQP 323
Query: 364 DIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQI 423
D+KGR+ I +++ KK L ++ +A TPGF+GAD++NV NEAAL+AAR + + +
Sbjct: 324 DVKGREMILKVHTKKTPLASDVDLGV--IARGTPGFSGADLSNVVNEAALLAARKDKSFV 381
Query: 424 TMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRG 483
M+ F+ A D+V+ G+E+++ VIS+ E++ AYHE+GH + + +P+ KV+I+PRG
Sbjct: 382 EMKDFDDAKDKVLMGVERRSMVISEEEKKNTAYHEAGHTLVAKLIPGTDPVHKVSIIPRG 441
Query: 484 TAALGFAQYVPNENL-LMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTY 542
A LG +P E+ KE L + + +GGRAAE+++ +++TGA ND+E+ T++
Sbjct: 442 RA-LGVTMQLPIEDKHSYNKESLLNRIAVLMGGRAAEEIIFNELTTGAGNDIERATEIAR 500
Query: 543 AQVAVYGFSDKVGLLSFPQRDDTF------EMTKPYSSKTGAIIDNEVREWVGKAYDHTV 596
V +G S+K+G ++F +++++ M K YS T ID E+R+ + +Y
Sbjct: 501 KMVCEWGMSEKMGPVTFGKKEESIFLGRDMSMHKNYSEATAVEIDEEIRKIIDGSYSRVK 560
Query: 597 KLIEEHREHVAQIAEELLEKEVLHQDDLVRVL 628
+L+ E+ + +A +L+EKE L D++ R++
Sbjct: 561 QLLNENLSVLHCLATQLIEKENLTGDEVDRII 592
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 228/545 (41%), Positives = 341/545 (62%)
Query: 138 PTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGC 197
P LL G F R+MQ F KA + D + K F DVAGC
Sbjct: 112 PMILLIGVWIFFMRQMQGGGGKGAMS-------FGKSKARMMSED---QIKTTFSDVAGC 161
Query: 198 DEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMS 257
DEAK+++ E V +L++P ++++LG KIP G L+VGPPGTGKTLLAKA AGE+ VPF ++S
Sbjct: 162 DEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTIS 221
Query: 258 GSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLN 317
GSDF+EMFVGVG SRVR +F++A++ +P I+FIDEIDA+ +DERE TLN
Sbjct: 222 GSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGG-HDEREQTLN 280
Query: 318 QLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLK 377
Q+LVEMDGF G++V+A TNRPD+LD ALLRPGRFDRQ+ + PD++GR+QI +++++
Sbjct: 281 QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMR 340
Query: 378 KLKLDN--EPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRV 435
K+ L N EPS +A TPGF+GAD+AN+ NEAAL AAR ++M FE A D++
Sbjct: 341 KVPLANDVEPSL----IARGTPGFSGADLANLVNEAALFAARGNKRNVSMVEFELAKDKI 396
Query: 436 IGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPN 495
+ G E+++ V+S+ + + AYHE+GHAV G + +P+ KV+I+PRG A LG Y+P
Sbjct: 397 MMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYKVSIIPRGRA-LGVTMYLPE 455
Query: 496 ENLL-MTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVYGFSD 552
++ + M+K+ L M GGR AE+++ GK +STGA ND+E+ T++ V +GFS+
Sbjct: 456 QDRVSMSKQHLESMISSLYGGRLAEELIYGKEKVSTGASNDIERATEIARKMVTQWGFSE 515
Query: 553 KVGLLSFPQRD-DTF-----EMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHV 606
K+G + + + + + F TK S T +ID+EVR+ + + Y+ ++I ++ + +
Sbjct: 516 KLGPMLYAEDEGEVFLGRSVTQTKHMSDDTAKLIDDEVRQIIDRNYERARQIIMDNMDIM 575
Query: 607 AQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNY-DRFKKGFLEDDKESKETK-EGGTA 664
+ + L++ E + + ++ +P EP + ++ K + K E K E TA
Sbjct: 576 HAMKDALMKYETIDAGQIDDLMARKPVIR-EPAGWGEQSKTPSAPEVKAEPEAKAEESTA 634
Query: 665 EDDNS 669
E +S
Sbjct: 635 ETASS 639
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 228/545 (41%), Positives = 341/545 (62%)
Query: 138 PTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGC 197
P LL G F R+MQ F KA + D + K F DVAGC
Sbjct: 112 PMILLIGVWIFFMRQMQGGGGKGAMS-------FGKSKARMMSED---QIKTTFSDVAGC 161
Query: 198 DEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMS 257
DEAK+++ E V +L++P ++++LG KIP G L+VGPPGTGKTLLAKA AGE+ VPF ++S
Sbjct: 162 DEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTIS 221
Query: 258 GSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLN 317
GSDF+EMFVGVG SRVR +F++A++ +P I+FIDEIDA+ +DERE TLN
Sbjct: 222 GSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGG-HDEREQTLN 280
Query: 318 QLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLK 377
Q+LVEMDGF G++V+A TNRPD+LD ALLRPGRFDRQ+ + PD++GR+QI +++++
Sbjct: 281 QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMR 340
Query: 378 KLKLDN--EPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRV 435
K+ L N EPS +A TPGF+GAD+AN+ NEAAL AAR ++M FE A D++
Sbjct: 341 KVPLANDVEPSL----IARGTPGFSGADLANLVNEAALFAARGNKRNVSMVEFELAKDKI 396
Query: 436 IGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPN 495
+ G E+++ V+S+ + + AYHE+GHAV G + +P+ KV+I+PRG A LG Y+P
Sbjct: 397 MMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYKVSIIPRGRA-LGVTMYLPE 455
Query: 496 ENLL-MTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVYGFSD 552
++ + M+K+ L M GGR AE+++ GK +STGA ND+E+ T++ V +GFS+
Sbjct: 456 QDRVSMSKQHLESMISSLYGGRLAEELIYGKEKVSTGASNDIERATEIARKMVTQWGFSE 515
Query: 553 KVGLLSFPQRD-DTF-----EMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHV 606
K+G + + + + + F TK S T +ID+EVR+ + + Y+ ++I ++ + +
Sbjct: 516 KLGPMLYAEDEGEVFLGRSVTQTKHMSDDTAKLIDDEVRQIIDRNYERARQIIMDNMDIM 575
Query: 607 AQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNY-DRFKKGFLEDDKESKETK-EGGTA 664
+ + L++ E + + ++ +P EP + ++ K + K E K E TA
Sbjct: 576 HAMKDALMKYETIDAGQIDDLMARKPVIR-EPAGWGEQSKTPSAPEVKAEPEAKAEESTA 634
Query: 665 EDDNS 669
E +S
Sbjct: 635 ETASS 639
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 227/495 (45%), Positives = 312/495 (63%)
Query: 171 FNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALL 230
F GK+ ++ + K F DVAG DEA +E+ E FL+NP +Y+ LGAKIPKG LL
Sbjct: 143 FGFGKSRAKQLSKDMP-KTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLL 201
Query: 231 VGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFI 290
GPPGTGKTLLA+A AGE+GVPF ++SGSDF+EMFVGVG SRVR LF++A+Q +P I+F+
Sbjct: 202 YGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFV 261
Query: 291 DEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLR 350
DEIDA+ +DERE TLNQLLVEMDGFG AGV+++A TNRPDILD ALLR
Sbjct: 262 DEIDAVGRQRGAGLGGG-HDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLR 320
Query: 351 PGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNE 410
PGRFDRQI + PD+ GR + +++ K + + LA T G GAD+ANV NE
Sbjct: 321 PGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADL--DGLAKRTVGMTGADLANVINE 378
Query: 411 AALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEH 470
AAL+ AR IT E A+DRVIGG +K ++IS+ E++ AYHE GH +A W +
Sbjct: 379 AALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPD 438
Query: 471 AEPLLKVTIVPRGTAALGFAQYVPNENL-LMTKEQLFDMTCMTLGGRAAEQVLLGKISTG 529
EP+ KVTI+ RG G A VP E+ L T+ ++ +GGRAAE+++ + +TG
Sbjct: 439 IEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVFREPTTG 497
Query: 530 AQNDLEKVTKMTYAQVAVYGFSDKVGLLSF-PQRDDTF---EM-TKP-YSSKTGAIIDNE 583
A +D+E+ TK+ + V +G S K+G + + + D F M T+P YS + ID E
Sbjct: 498 AVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEE 557
Query: 584 VREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDR 643
VR+ + A+ +++ E+R+ + +A ELLEKE LH+ +L + + K T +D
Sbjct: 558 VRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFADVE-KRPRLTMFDD 616
Query: 644 FKKGFLEDDKESKET 658
F G + DK +T
Sbjct: 617 FG-GRIPSDKPPIKT 630
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 222/482 (46%), Positives = 319/482 (66%)
Query: 172 NIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLV 231
N K+ M N ++KV F DVAG DEAK+E++E V FLK+ +++++LG KIPKG LL+
Sbjct: 137 NFSKSRAKLMTEN-RNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLI 195
Query: 232 GPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFID 291
G PGTGKTLLA+A AGE+ VPF S+SGSDF+EMFVGVG SRVR +F++ ++ AP I+FID
Sbjct: 196 GSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFID 255
Query: 292 EIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRP 351
EIDA+ NDERE TLNQLLVEMDGF + GV+++A TNRPD+LD ALLRP
Sbjct: 256 EIDAVGRHRGIGLGGG-NDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRP 314
Query: 352 GRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEA 411
GRFDRQ+TI PDI GR++I +++KK+ P + +A TPGF+GAD+AN+ NEA
Sbjct: 315 GRFDRQVTISIPDINGREKIINVHIKKVP--TAPDVNIRTIARGTPGFSGADLANLVNEA 372
Query: 412 ALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHA 471
ALIAAR +TM FE A D+V+ G E+K+ ++++ ERR AYHE+GHA+ +F E +
Sbjct: 373 ALIAARLNKKIVTMSDFEYARDKVMMGAERKSLMMTEEERRLTAYHEAGHAIIAFFTEAS 432
Query: 472 EPLLKVTIVPRGTAALGFAQYVP-NENLLMTKEQLF-DMTCMTLGGRAAEQVLLG--KIS 527
+P+ K TI+PRG + LG +P ++ + T+E++ D+T + +GGRAAE+++ G K++
Sbjct: 433 DPIHKATIIPRGRS-LGLVMRLPESDRVSHTREKMIADLT-VAMGGRAAEELIFGYHKVT 490
Query: 528 TGAQNDLEKVTKMTYAQVAVYGFSDKVG-LLSFPQRDDTFEMTKPYSSKTGAIIDNEVRE 586
+GA +D+++ T + A V +G SDKVG L ++DT S+ +ID EV+
Sbjct: 491 SGASSDIKQATDLAKAMVMKWGMSDKVGPLYHNDDKNDTI------SNNLANLIDEEVKL 544
Query: 587 WVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKK 646
V A + L+ EH E + +A+ LLE E L +D+ ++ + + K+
Sbjct: 545 IVTSALERAKSLLNEHLESLHIVAKNLLEFETLTGEDIKNIINGKELTKDDIEESQVLKR 604
Query: 647 GF 648
F
Sbjct: 605 SF 606
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 222/482 (46%), Positives = 319/482 (66%)
Query: 172 NIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLV 231
N K+ M N ++KV F DVAG DEAK+E++E V FLK+ +++++LG KIPKG LL+
Sbjct: 137 NFSKSRAKLMTEN-RNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLI 195
Query: 232 GPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFID 291
G PGTGKTLLA+A AGE+ VPF S+SGSDF+EMFVGVG SRVR +F++ ++ AP I+FID
Sbjct: 196 GSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFID 255
Query: 292 EIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRP 351
EIDA+ NDERE TLNQLLVEMDGF + GV+++A TNRPD+LD ALLRP
Sbjct: 256 EIDAVGRHRGIGLGGG-NDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRP 314
Query: 352 GRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEA 411
GRFDRQ+TI PDI GR++I +++KK+ P + +A TPGF+GAD+AN+ NEA
Sbjct: 315 GRFDRQVTISIPDINGREKIINVHIKKVP--TAPDVNIRTIARGTPGFSGADLANLVNEA 372
Query: 412 ALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHA 471
ALIAAR +TM FE A D+V+ G E+K+ ++++ ERR AYHE+GHA+ +F E +
Sbjct: 373 ALIAARLNKKIVTMSDFEYARDKVMMGAERKSLMMTEEERRLTAYHEAGHAIIAFFTEAS 432
Query: 472 EPLLKVTIVPRGTAALGFAQYVP-NENLLMTKEQLF-DMTCMTLGGRAAEQVLLG--KIS 527
+P+ K TI+PRG + LG +P ++ + T+E++ D+T + +GGRAAE+++ G K++
Sbjct: 433 DPIHKATIIPRGRS-LGLVMRLPESDRVSHTREKMIADLT-VAMGGRAAEELIFGYHKVT 490
Query: 528 TGAQNDLEKVTKMTYAQVAVYGFSDKVG-LLSFPQRDDTFEMTKPYSSKTGAIIDNEVRE 586
+GA +D+++ T + A V +G SDKVG L ++DT S+ +ID EV+
Sbjct: 491 SGASSDIKQATDLAKAMVMKWGMSDKVGPLYHNDDKNDTI------SNNLANLIDEEVKL 544
Query: 587 WVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKK 646
V A + L+ EH E + +A+ LLE E L +D+ ++ + + K+
Sbjct: 545 IVTSALERAKSLLNEHLESLHIVAKNLLEFETLTGEDIKNIINGKELTKDDIEESQVLKR 604
Query: 647 GF 648
F
Sbjct: 605 SF 606
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 234/520 (45%), Positives = 328/520 (63%)
Query: 171 FNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALL 230
F KA + D + KV F DVAG DEAK+E+ E V FL++P K++ LG K+P G LL
Sbjct: 138 FGRSKARLLSQD---QVKVTFDDVAGVDEAKEEVKELVEFLRDPGKFQRLGGKMPCGVLL 194
Query: 231 VGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFI 290
VGPPGTGKTLLAKA AGE+ VPF ++SGSDF+EMFVGVG SRVR +F +A++ AP I+FI
Sbjct: 195 VGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFI 254
Query: 291 DEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLR 350
DEIDA+ +DERE TLNQLLVEMDGF G++V+A TNRPD+LD ALLR
Sbjct: 255 DEIDAVGRHRGAGLGGG-HDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLR 313
Query: 351 PGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNE 410
PGRFDRQ+ + PDIKGR+ I ++++ KL L + + +A TPGF+GAD+AN+ NE
Sbjct: 314 PGRFDRQVVVPLPDIKGREYILKVHMNKLPLAKDVK--ASVIARGTPGFSGADLANIVNE 371
Query: 411 AALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGW-FLE 469
AAL AAR ++M FE A D+++ G E+++ V+S E++ AYHE+GHA+ G LE
Sbjct: 372 AALFAARENKKDVSMSEFERAKDKIMMGAERRSMVMSDDEKKLTAYHEAGHAIVGLHMLE 431
Query: 470 HAEPLLKVTIVPRGTAALGFAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--I 526
H +P+ KVTI+PRG A LG ++P ++ MTK +L GGR AE+++ G +
Sbjct: 432 H-DPVYKVTIIPRGRA-LGVTMFLPEHDRYSMTKRRLECQLAGLFGGRIAEEIIFGPDLV 489
Query: 527 STGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRD-DTF---EMT--KPYSSKTGAII 580
+TGA ND+EK T++ V +G S K+G L++ + + + F +T K S T I
Sbjct: 490 TTGASNDIEKATEIARNMVTKWGLSQKLGPLTYREEEGEVFLGRSVTQRKDISDATNKEI 549
Query: 581 DNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVL-GERPFKHSEPT 639
D+EVR V AY + +EEH E + +A+ L++ E + + + +L G+ P S P
Sbjct: 550 DSEVRRIVDTAYTTAKQTLEEHIEQLHLMAKALIKYETIGEAQIKEILAGKEP---SPPP 606
Query: 640 NYDRFKKGFLEDDKESKE---TKEGGTAEDDNSSSPLEPE 676
++ + G KE+ E ++E G + N S P E
Sbjct: 607 DWKE-ENGSASAHKENSEKELSEEKGEEKTVNPSRPRPAE 645
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
Identities = 215/449 (47%), Positives = 295/449 (65%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F DVAG D+AK E+ E V FLKNP KY LGAKIPKG LLVGPPGTGKTLLA+A AGE
Sbjct: 259 VSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 318
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+GVPF S + S+F+E+FVGVG SRVR LF++A+ AP IVFIDEIDA+
Sbjct: 319 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGG- 377
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
NDERE T+NQLL EMDGF +GV+VLA TNRPD+LD ALLRPGRFDRQ+T+D+PD+ GR
Sbjct: 378 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 437
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I Q++ + L + F ++A TPGF GAD+ N+ NEAA++AAR E +I+
Sbjct: 438 VKILQVHSRGKALGKDVDF--DKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEI 495
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
A++R+I G EKKN V+S+ ++R VAYHE+GHA+ G + +P+ K++I+PRG A G
Sbjct: 496 SDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-G 554
Query: 489 FAQYVPNENLL----MTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTY 542
+ P+E L ++ L + + LGGR AE+V+ G ++TGA ND +V+++
Sbjct: 555 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVAR 614
Query: 543 AQVAVYGFSDKVGLLSF------PQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTV 596
+ +GFS K+G ++ P K YS T I+D EVRE V KAY
Sbjct: 615 QMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYKRAT 674
Query: 597 KLIEEHREHVAQIAEELLEKEVLHQDDLV 625
++I H + + ++A+ L+EKE + ++ +
Sbjct: 675 EIITTHIDILHKLAQLLIEKETVDGEEFM 703
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
Identities = 233/549 (42%), Positives = 334/549 (60%)
Query: 97 VESFEEKLEEAQEALGIDPHDY-IPVTYENEVNWYQELMRFAPTALLFGALWFMGRKMQS 155
+ + +E + + G+D D + + ++W ++ + P + G L F+ + +
Sbjct: 74 LSTVKEYIASIYDIEGLDLTDVKVNIQPAGGLDWGTMILTYLPFLIFGGLLIFIFTQARG 133
Query: 156 XXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPK 215
+FN+ K TIT F +VAG DEAKQE+ E V FLK+ +
Sbjct: 134 ANNQAVSFGRSKAKLFNMDKPTIT-----------FANVAGVDEAKQEVGEVVEFLKSRE 182
Query: 216 KYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRS 275
K++ LGA+IPKG LL+GPPGTGKTLLAKA AGE+GVPF S+SGS+F+EMFVGVG SRVR
Sbjct: 183 KFQALGARIPKGILLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRD 242
Query: 276 LFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVL 335
LF +A++ AP I+FIDEIDA+ +DERE TLNQ+LVEMDGF T V+V+
Sbjct: 243 LFDQAKKNAPCIIFIDEIDAVGRQRGAGLGGG-HDEREQTLNQILVEMDGFDTDTSVIVI 301
Query: 336 AGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAAL 395
A TNRPDILD ALLRPGRFDR++ +DKPDI GR+ I +I+ K L + + + LA
Sbjct: 302 AATNRPDILDPALLRPGRFDRRVVLDKPDITGREAILKIHAKGKPLADTVNL--ENLAKQ 359
Query: 396 TPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVA 455
T GF+GAD+AN+ NEAA++AAR + + E +IDRVI G E+K++ IS E+ A
Sbjct: 360 TVGFSGADLANLLNEAAILAARKNRKVVETEDLEESIDRVIAGPERKSRRISTQEKEVTA 419
Query: 456 YHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLG 514
YHE+GH + ++ A+P+ K++IV RG LG + +PNE+ LMT+ Q M L
Sbjct: 420 YHETGHGLVLRLVQGADPVHKISIVARGMT-LGHTRQLPNEDRYLMTRSQFKAMMAGLLA 478
Query: 515 GRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDD-TF---EMT- 569
G AE++ ++STGA +DL + T + + V YG SDK+G +F +++ F E++
Sbjct: 479 GYVAEELTFKELSTGASDDLRRATDIAHKMVTSYGMSDKLGPRTFGNKEEMVFLGREISE 538
Query: 570 -KPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRV- 627
K Y K +ID EVR + +A+ ++ E++ + IAE+L EKE L +L +
Sbjct: 539 QKDYGEKVADMIDEEVRGLIEEAHQKAKTILTENKNRLKFIAEKLFEKETLEGAELENLF 598
Query: 628 LGERPFKHS 636
+GE P S
Sbjct: 599 VGEFPVSES 607
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 248/586 (42%), Positives = 355/586 (60%)
Query: 60 TPRSTNETNDDFTQSPVNGSPDKRNLS--QCKYYFNIGSVESFEEKLEEAQ-EALGIDPH 116
T +S +T +F + G+ K L Q +Y + G + K +A+ L ID +
Sbjct: 32 TLQSQEKTYSEFVSAVDEGNVTKVILDGEQIRYRTSDGR-DFVTIKPGDAEVTTLLIDKN 90
Query: 117 DYIPVTYENEV-NWYQE-LMRFAPTALLFGA-LWFMGRKMQSXXXXXXXXXXXXXXIFNI 173
IPV E + + +Q ++ P LL G ++FM R MQ
Sbjct: 91 --IPVRAEKQQQSGFQSFIITLLPFLLLIGVWVYFMNR-MQGGGRGGA---------MGF 138
Query: 174 GKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGP 233
GK+ KM +V F DVAG DEAK+E+ E V FL+NP+K+ LG KIPKGALLVGP
Sbjct: 139 GKSK-AKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGP 197
Query: 234 PGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEI 293
PGTGKTLLA+A AGE+GVPF ++SGSDF+EMFVGVG SRVR +F++A++ AP IVFIDEI
Sbjct: 198 PGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEI 257
Query: 294 DAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGR 353
DA+ NDERE TLNQLLVEMDGF GV++LA TNR D+LD ALLRPGR
Sbjct: 258 DAVGRHRGAGYGGG-NDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGR 316
Query: 354 FDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAAL 413
FDR +T+ PDIKGR++I ++ +K L P + +A TPGF+GAD+AN+ NEAAL
Sbjct: 317 FDRNVTVGNPDIKGREKILGVHARKTPLG--PDVDLRIIARGTPGFSGADLANLVNEAAL 374
Query: 414 IAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEP 473
+AAR +TM+ FE A D+V+ G E+++ V+++ ++ AYHE+GHAV G L +P
Sbjct: 375 MAARVGRRFVTMEDFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGLALPMCDP 434
Query: 474 LLKVTIVPRGTAALGFAQYVPN-ENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGA 530
+ K TI+PRG ALG +P + L +++ MT+ G+AAE + G+ +S G
Sbjct: 435 VYKATIIPRG-GALGMVVSLPEMDRLNWHRDECQQKLAMTMAGKAAEILKYGEDHVSNGP 493
Query: 531 QNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFE-MTKPYS--SKTGAIIDNEVREW 587
D+++ +++ A V +G SDKVG + + + + + T +S + T +I+ EV+ +
Sbjct: 494 AGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIEEEVKRF 553
Query: 588 VGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVL-GERP 632
+ + YD ++ E RE ++A+ LLE E L +++ RV+ GE P
Sbjct: 554 IQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVMKGEPP 599
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 248/586 (42%), Positives = 355/586 (60%)
Query: 60 TPRSTNETNDDFTQSPVNGSPDKRNLS--QCKYYFNIGSVESFEEKLEEAQ-EALGIDPH 116
T +S +T +F + G+ K L Q +Y + G + K +A+ L ID +
Sbjct: 32 TLQSQEKTYSEFVSAVDEGNVTKVILDGEQIRYRTSDGR-DFVTIKPGDAEVTTLLIDKN 90
Query: 117 DYIPVTYENEV-NWYQE-LMRFAPTALLFGA-LWFMGRKMQSXXXXXXXXXXXXXXIFNI 173
IPV E + + +Q ++ P LL G ++FM R MQ
Sbjct: 91 --IPVRAEKQQQSGFQSFIITLLPFLLLIGVWVYFMNR-MQGGGRGGA---------MGF 138
Query: 174 GKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGP 233
GK+ KM +V F DVAG DEAK+E+ E V FL+NP+K+ LG KIPKGALLVGP
Sbjct: 139 GKSK-AKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGP 197
Query: 234 PGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEI 293
PGTGKTLLA+A AGE+GVPF ++SGSDF+EMFVGVG SRVR +F++A++ AP IVFIDEI
Sbjct: 198 PGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEI 257
Query: 294 DAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGR 353
DA+ NDERE TLNQLLVEMDGF GV++LA TNR D+LD ALLRPGR
Sbjct: 258 DAVGRHRGAGYGGG-NDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGR 316
Query: 354 FDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAAL 413
FDR +T+ PDIKGR++I ++ +K L P + +A TPGF+GAD+AN+ NEAAL
Sbjct: 317 FDRNVTVGNPDIKGREKILGVHARKTPLG--PDVDLRIIARGTPGFSGADLANLVNEAAL 374
Query: 414 IAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEP 473
+AAR +TM+ FE A D+V+ G E+++ V+++ ++ AYHE+GHAV G L +P
Sbjct: 375 MAARVGRRFVTMEDFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGLALPMCDP 434
Query: 474 LLKVTIVPRGTAALGFAQYVPN-ENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGA 530
+ K TI+PRG ALG +P + L +++ MT+ G+AAE + G+ +S G
Sbjct: 435 VYKATIIPRG-GALGMVVSLPEMDRLNWHRDECQQKLAMTMAGKAAEILKYGEDHVSNGP 493
Query: 531 QNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFE-MTKPYS--SKTGAIIDNEVREW 587
D+++ +++ A V +G SDKVG + + + + + T +S + T +I+ EV+ +
Sbjct: 494 AGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIEEEVKRF 553
Query: 588 VGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVL-GERP 632
+ + YD ++ E RE ++A+ LLE E L +++ RV+ GE P
Sbjct: 554 IQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVMKGEPP 599
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 219/468 (46%), Positives = 306/468 (65%)
Query: 172 NIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLV 231
N GK+ + M+AK V F DVAG DEAK+E+ E V FLK P+++ +GAKIPKG LLV
Sbjct: 153 NFGKSK-ARFQMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLV 211
Query: 232 GPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFID 291
GPPGTGKTLLAKA AGE+GVPF S+SGS+F+EMFVGVG SRVR LF++A++ AP ++FID
Sbjct: 212 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFID 271
Query: 292 EIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRP 351
EIDA+ NDERE TLNQLL EMDGF G++++A TNRPD+LD AL+RP
Sbjct: 272 EIDAVGRQRGAGIGGG-NDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRP 330
Query: 352 GRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEA 411
GRFDRQ+ +D PD GR +I +++ + KL E S S +A TPGF+GAD+AN+ NEA
Sbjct: 331 GRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDS--IARRTPGFSGADLANLLNEA 388
Query: 412 ALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHA 471
A++ AR + IT+ + A+DRV+ G+E V SK +R +AYHE GHA+ G L+
Sbjct: 389 AILTARRRKSAITLLEIDDAVDRVVAGMEGTPLVDSK-SKRLIAYHEVGHAIVGTLLKDH 447
Query: 472 EPLLKVTIVPRGTAALGFAQYVPNENL-LMTKEQLFDMTCMTLGGRAAEQVLLG--KIST 528
+P+ KVT++PRG A G + PNE L TK QL +GGRAAE+ + G +++T
Sbjct: 448 DPVQKVTLIPRGQAQ-GLTWFTPNEEQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTT 506
Query: 529 GAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRD-DTFE----MTKP-YSSKTGAIIDN 582
GA DL++VT+M V +G S+ +G +S + F M + YS + ID
Sbjct: 507 GAGGDLQQVTEMARQMVTRFGMSN-LGPISLESSGGEVFLGGGLMNRSEYSEEVATRIDA 565
Query: 583 EVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVLGE 630
+VR+ + + K+++E RE V ++ + L+EKE + ++ +++ E
Sbjct: 566 QVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIVAE 613
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 221/556 (39%), Positives = 341/556 (61%)
Query: 131 QELMRFAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVF 190
Q + + P LL G F R+MQ F KA + D + K
Sbjct: 106 QIFISWFPMLLLIGVWIFFMRQMQGGGGKGAMS-------FGKSKAKLMSED---QIKTT 155
Query: 191 FKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESG 250
F DVAGCDEAK+E+ E V +L++P K+++LG +IP G L+VGPPGTGKTLLAKA AGES
Sbjct: 156 FADVAGCDEAKEEVKELVDYLRDPTKFQKLGGRIPTGVLMVGPPGTGKTLLAKAIAGESK 215
Query: 251 VPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXND 310
VPF ++SGSDF+EMFVGVG SRVR +F++A++ AP I+FIDEIDA+ +D
Sbjct: 216 VPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQRGAGLGGG-HD 274
Query: 311 ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQ 370
ERE TLNQ+LVEMDGF G++V+A TNRPD+LD ALLRPGRFDRQ+ + PD++GR+Q
Sbjct: 275 EREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQVVVGLPDVRGREQ 334
Query: 371 IFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEA 430
I +++++K+ L + + +A TPGF+GAD+AN+ NEAAL AAR + M+ FE
Sbjct: 335 ILKVHMRKVPLSEDVK--ASVIARGTPGFSGADLANLVNEAALFAARGNRRVVGMEEFER 392
Query: 431 AIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFA 490
A D+++ G E+++ V+S+ E+ AYHE+GHA+ G + +P+ KVTI+PRG A LG
Sbjct: 393 AKDKIMMGAERRSMVMSEAEKEMTAYHEAGHAIVGCLVPEHDPVHKVTIIPRGRA-LGVT 451
Query: 491 QYVPNENLL-MTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAV 547
++P + + ++ +L + GGR AE+++ G K+STGA D++ T + V
Sbjct: 452 FFLPEADAISQSRRKLESQISVAYGGRLAEELIYGTEKVSTGASQDIKYATSIARNMVTQ 511
Query: 548 YGFSDKVGLLSFPQRD-DTF---EM--TKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEE 601
+GFSDK+G L + + + + F M K S +T +ID EV+ ++ K Y +++++
Sbjct: 512 WGFSDKLGPLLYAEEEGEVFLGRSMGKAKAMSDETATLIDTEVKAFIDKNYSRAKQILQD 571
Query: 602 HREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGFLEDDKESKETKEG 661
+ + + + + L++ E + + ++ R + +P ++ + G +DK + + +
Sbjct: 572 NVDILHSMKDALMKYETIDSLQIDDLMNRREVR--QPADWQADENG--SNDKGNGKGEPA 627
Query: 662 GTAEDDNSSSPLEPEV 677
++ S+P E E+
Sbjct: 628 VKVDEVVKSAPAEAEL 643
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
Identities = 212/449 (47%), Positives = 296/449 (65%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F DVAG D+AK E+ E V FLKNP KY LGAKIPKG LLVGPPGTGKTLLA+A AGE
Sbjct: 247 VTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 306
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+GVPF S + S+F+E+FVGVG SRVR LF++A+ AP IVFIDEIDA+
Sbjct: 307 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGG- 365
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
NDERE T+NQLL EMDGF +GV+VLA TNRPD+LD ALLRPGRFDRQ+T+D+PD+ GR
Sbjct: 366 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 425
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
QI +++ + + + + +++A TPGF GAD+ N+ NEAA++AAR E +I+
Sbjct: 426 VQILKVHSRGKAIGKDVDY--EKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEI 483
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
A++R+I G EKKN V+S+ ++R VAYHE+GHA+ G + +P+ K++I+PRG A G
Sbjct: 484 SDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-G 542
Query: 489 FAQYVPNENLL----MTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTY 542
+ P+E L ++ L + + LGGR AE+V+ G ++TGA ND +V+++
Sbjct: 543 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVAR 602
Query: 543 AQVAVYGFSDKVGLLSF------PQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTV 596
V +GFS K+G ++ P + K YS T ++D EVRE V KAY
Sbjct: 603 QMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAK 662
Query: 597 KLIEEHREHVAQIAEELLEKEVLHQDDLV 625
++I + + ++A+ L+EKE + ++ +
Sbjct: 663 EIITTQIDILHKLAQLLIEKETVDGEEFM 691
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 1033 (368.7 bits), Expect = 2.5e-104, P = 2.5e-104
Identities = 229/556 (41%), Positives = 338/556 (60%)
Query: 138 PTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGC 197
P LL G F R+MQ + GK+ ++ + K F DVAGC
Sbjct: 110 PMILLIGVWIFFMRQMQGGGGKGA---------MSFGKSKARQLS-EEQIKTTFADVAGC 159
Query: 198 DEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMS 257
DEAK+++ E V +L+ P ++++LG +IP G LLVG PGTGKTLLAKA AGE+ VPF ++S
Sbjct: 160 DEAKEDVAELVDYLREPSRFQKLGGRIPSGILLVGQPGTGKTLLAKAIAGEAKVPFFTIS 219
Query: 258 GSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLN 317
GSDF+EMFVGVG SRVR +F++A++ AP I+FIDEIDA+ +DERE TLN
Sbjct: 220 GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGMGGG-HDEREQTLN 278
Query: 318 QLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLK 377
Q+LVEMDGF GV+V+A TNRPD+LD ALLRPGRFDRQ+T+ PDI+GR+QI +++++
Sbjct: 279 QMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVTVGLPDIRGREQILKVHMR 338
Query: 378 KLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIG 437
K+ L ++ ++ +A TPGF+GAD+AN+ NEAAL AAR ++M+ F+AA D+++
Sbjct: 339 KVPLGDDVK--AEVIARGTPGFSGADLANLVNEAALCAARTARRVVSMKEFDAAKDKIMM 396
Query: 438 GLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN 497
G E+K+ V+S+ ER AYHE+GHA+ G + +P+ KV+I+PRG A LG Y+P ++
Sbjct: 397 GSERKSMVMSESEREMTAYHEAGHAIIGRLVPDHDPVYKVSIIPRGRA-LGVTMYLPEQD 455
Query: 498 LLMTKEQLFDMTCMTL-GGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSDKV 554
+Q + +L GGR AE+V+ G K+STGA ND+E+ T + V +G S+K+
Sbjct: 456 RFSHSKQHLESNISSLYGGRVAEEVIYGSDKVSTGASNDIERATNIARKMVTQWGLSEKM 515
Query: 555 GLLSFPQRDD------TFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQ 608
G + F + + T + S +T ID E++ + + Y LI+ + + +
Sbjct: 516 GPMLFAEEEGEVFLGRTSAKSLHMSDETAKTIDEEIKSVISRNYQRAEDLIKANMDVLHA 575
Query: 609 IAEELLEKEV---LHQDDLVRVLGERP-----FKHSEPTNYDRFKKGFLEDDKESKETKE 660
+ + L++ E L DDL+ RP K +N D KG D E+ + K+
Sbjct: 576 MKDCLMKYETIDALQIDDLMARTSVRPPAGWEDKGGSSSNSDD-SKGDKAADVEATD-KD 633
Query: 661 GGTAEDDNSSSPLEPE 676
T D +S ++P+
Sbjct: 634 AETTSDPEETSQVKPD 649
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 230/510 (45%), Positives = 312/510 (61%)
Query: 140 ALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGCDE 199
ALL G L+ + R+ S F KA K M V F DVAG DE
Sbjct: 180 ALLIGGLFLLSRR--SGGGMGGPGGPGNPLQFGQSKA---KFQMEPNTGVTFDDVAGVDE 234
Query: 200 AKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGS 259
AKQ+ ME V FLK P+++ +GAKIPKG LL+GPPGTGKTLLAKA AGE+GVPF S+SGS
Sbjct: 235 AKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGS 294
Query: 260 DFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQL 319
+F+EMFVGVG SRVR LF++A++ AP IVF+DEIDA+ NDERE TLNQL
Sbjct: 295 EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGG-NDEREQTLNQL 353
Query: 320 LVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKL 379
L EMDGF GV+V+A TNR DILD ALLRPGRFDRQ+++D PD+KGR I +++
Sbjct: 354 LTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNK 413
Query: 380 KLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIGGL 439
K DN+ S + +A TPGF+GAD+AN+ NEAA++A R I+ + + +IDR++ G+
Sbjct: 414 KFDNDVSL--EIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDRIVAGM 471
Query: 440 EKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-L 498
E K + VAYHE GHAV G + + KVT++PRG A G ++P+++
Sbjct: 472 EGTVMTDGK-SKSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQAR-GLTWFIPSDDPT 529
Query: 499 LMTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQVAVYGFSDKVG- 555
L++K+QLF LGGRAAE+++ G +++TGA DL+++T + V +G SD +G
Sbjct: 530 LISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLARQMVTTFGMSD-IGP 588
Query: 556 --LL-SFPQRDDTFEMT--KPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQIA 610
L+ S Q D M S K ID+ V++ AY+ + I+ +RE + ++
Sbjct: 589 WSLMDSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAMDKLV 648
Query: 611 EELLEKEVLHQDDLVRVLGERPFKHSEPTN 640
E LLEKE + D+ +L E F P N
Sbjct: 649 EVLLEKETIGGDEFRAILSE--FTEIPPEN 676
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 215/507 (42%), Positives = 317/507 (62%)
Query: 138 PTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFKDVAGC 197
P LL G F R+MQ F KA + D + K F DVAGC
Sbjct: 108 PMLLLIGVWIFFMRQMQGGGGKGAMS-------FGKSKARMLTED---QIKTTFADVAGC 157
Query: 198 DEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMS 257
DEAK+E+ E V +L+ P ++++LG KIPKG L+VGPPGTGKTLLAKA AGE+ VPF ++S
Sbjct: 158 DEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTIS 217
Query: 258 GSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLN 317
GSDF+EMFVGVG SRVR +F++A++ AP I+FIDEIDA+ +DERE TLN
Sbjct: 218 GSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGG-HDEREQTLN 276
Query: 318 QLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLK 377
Q+LVEMDGF G++V+A TNRPD+LD ALLRPGRFDRQ+ + PD++GR+QI +++++
Sbjct: 277 QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMR 336
Query: 378 KLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAIDRVIG 437
++ L P + +A TPGF+GAD+AN+ NEAAL AAR ++M FE A D+++
Sbjct: 337 RVPL--APDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMM 394
Query: 438 GLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN 497
G E+++ V+++ ++ + AYHE+GHA+ G + +P+ KVTI+PRG A LG ++P +
Sbjct: 395 GAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRA-LGVTFFLPEGD 453
Query: 498 LLMTKEQLFDMTCMTL-GGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVYGFSDKV 554
+ Q + TL GGR AE+++ G +STGA ND++ T + V +GFS+K+
Sbjct: 454 AISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKL 513
Query: 555 GLLSFPQRD-DTF-----EMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQ 608
G L + + + + F K S +T IID EV+ + + Y+ +L+ ++ + +
Sbjct: 514 GPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHA 573
Query: 609 IAEELLEKEVLHQ---DDLVRVLGERP 632
+ + L++ E + DDL+ RP
Sbjct: 574 MKDALMKYETIDAPQIDDLMARRDVRP 600
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
Identities = 214/449 (47%), Positives = 303/449 (67%)
Query: 184 NAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAK 243
+++ KV F DVAG +EAK+E++E V FLK+ +K+ +LG KIPKG LL+G PGTGKTLLA+
Sbjct: 150 DSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLAR 209
Query: 244 ATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXX 303
A AGE+ VPF S+SGSDF+EMFVGVG SRVR +F++ ++ AP I+F+DEIDA+
Sbjct: 210 AIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIG 269
Query: 304 XXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKP 363
NDERE TLNQLLVEMDGF + GVV++A TNRPD+LD ALLRPGRFDRQ+TI P
Sbjct: 270 LGGG-NDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIP 328
Query: 364 DIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQI 423
DI GR++I ++ KK+ L P + +A TPGF+GAD+AN+ NEAALIAAR + +
Sbjct: 329 DINGREKIIAVHAKKVPL--APDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIV 386
Query: 424 TMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRG 483
TM FE A D+V+ G E+K+ V+ + ERR AYHE+GHAV + ++P+ K TI+PRG
Sbjct: 387 TMCDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATIIPRG 446
Query: 484 TAALGFAQYVPN-ENLLMTKEQLF-DMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTK 539
+ LG +P + + T+E++ D+T + +GGRAAE+++ G K+++GA +D+++ T
Sbjct: 447 RS-LGLVMRLPETDRVSHTREKMLADLT-VAMGGRAAEELIFGYNKVTSGASSDIKQATD 504
Query: 540 MTYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLI 599
+ + V +G SD VG L D+ E S+ +ID+EV+ V A ++
Sbjct: 505 LAKSMVMKWGMSDSVGPLY--HSDEAHERI---STNLANLIDDEVKSIVSTALAEAKDVL 559
Query: 600 EEHREHVAQIAEELLEKEVLHQDDLVRVL 628
+H + + IA LLE E L DD+ ++
Sbjct: 560 TKHSDALHAIAANLLEFETLTGDDIADII 588
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
Identities = 214/449 (47%), Positives = 303/449 (67%)
Query: 184 NAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAK 243
+++ KV F DVAG +EAK+E++E V FLK+ +K+ +LG KIPKG LL+G PGTGKTLLA+
Sbjct: 150 DSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLAR 209
Query: 244 ATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXX 303
A AGE+ VPF S+SGSDF+EMFVGVG SRVR +F++ ++ AP I+F+DEIDA+
Sbjct: 210 AIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIG 269
Query: 304 XXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKP 363
NDERE TLNQLLVEMDGF + GVV++A TNRPD+LD ALLRPGRFDRQ+TI P
Sbjct: 270 LGGG-NDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIP 328
Query: 364 DIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQI 423
DI GR++I ++ KK+ L P + +A TPGF+GAD+AN+ NEAALIAAR + +
Sbjct: 329 DINGREKIIAVHAKKVPL--APDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIV 386
Query: 424 TMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRG 483
TM FE A D+V+ G E+K+ V+ + ERR AYHE+GHAV + ++P+ K TI+PRG
Sbjct: 387 TMCDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATIIPRG 446
Query: 484 TAALGFAQYVPN-ENLLMTKEQLF-DMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTK 539
+ LG +P + + T+E++ D+T + +GGRAAE+++ G K+++GA +D+++ T
Sbjct: 447 RS-LGLVMRLPETDRVSHTREKMLADLT-VAMGGRAAEELIFGYNKVTSGASSDIKQATD 504
Query: 540 MTYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLI 599
+ + V +G SD VG L D+ E S+ +ID+EV+ V A ++
Sbjct: 505 LAKSMVMKWGMSDSVGPLY--HSDEAHERI---STNLANLIDDEVKSIVSTALAEAKDVL 559
Query: 600 EEHREHVAQIAEELLEKEVLHQDDLVRVL 628
+H + + IA LLE E L DD+ ++
Sbjct: 560 TKHSDALHAIAANLLEFETLTGDDIADII 588
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 998 (356.4 bits), Expect = 1.3e-100, P = 1.3e-100
Identities = 219/477 (45%), Positives = 302/477 (63%)
Query: 173 IGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVG 232
IG++ K M V F DVAG DEAKQ+ ME V FLK P+++ +GA+IPKG LLVG
Sbjct: 202 IGQSK-AKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVG 260
Query: 233 PPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDE 292
PPGTGKTLLAKA AGE+GVPF S+SGS+F+EMFVGVG SRVR LF++A++ AP IVF+DE
Sbjct: 261 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 320
Query: 293 IDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPG 352
IDA+ NDERE TLNQLL EMDGF GV+V+A TNR DILD ALLRPG
Sbjct: 321 IDAVGRQRGTGIGGG-NDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPG 379
Query: 353 RFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAA 412
RFDRQ+++D PD+KGR I +++ K ++ S + +A TPGF+GAD+AN+ NEAA
Sbjct: 380 RFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSL--EVIAMRTPGFSGADLANLLNEAA 437
Query: 413 LIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAE 472
++A R I+ + + +IDR++ G+E K + VAYHE GHA+ G +
Sbjct: 438 ILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGK-SKSLVAYHEVGHAICGTLTPGHD 496
Query: 473 PLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTG 529
+ KVT++PRG A G ++P+++ L++K+QLF LGGRAAE+V+ G+ ++TG
Sbjct: 497 AVQKVTLIPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTG 555
Query: 530 AQNDLEKVTKMTYAQVAVYGFSDKVG---LLSFPQRDDTFE--MTK-PYSSKTGAIIDNE 583
A +DL+++T + V +G S+ +G L+ ++ D M + S K ID
Sbjct: 556 AVSDLQQITGLAKQMVTTFGMSE-IGPWSLMDSSEQSDVIMRMMARNSMSEKLANDIDTA 614
Query: 584 VREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTN 640
V+ KAY+ + I +RE + +I E LLEKE + D+ +L E F P N
Sbjct: 615 VKTLSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSE--FTEIPPEN 669
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
Identities = 213/507 (42%), Positives = 301/507 (59%)
Query: 133 LMRFAPTALLFGALWFMGRKMQSXXXXXXXXXXXXXXIFNIGKATITKMDMNAKDKVFFK 192
L+ P L+ G W R M+ N K+ +AK KV F
Sbjct: 124 LLYVLPWILIIGVWWLAMRGMRGQGPTSVMG--------NFSKSGAKMYTPSAKVKVTFD 175
Query: 193 DVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 252
DVAG + K E+ E V +L++PKK++ +G K+PKG LLVGPPGTGKTLLA+A AGE+ V
Sbjct: 176 DVAGMENPKMELKEIVDYLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGEADVT 235
Query: 253 FLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDER 312
FLS+S S F+EMFVGVG RVR LF A++ APSI+FIDE+DA+ +DER
Sbjct: 236 FLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGGG-HDER 294
Query: 313 ESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 372
E TLNQLL EMDGF + V+V+A TNRPD+LD ALLRPGRFDR + ID+PD + R++I
Sbjct: 295 EQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRDREKIL 354
Query: 373 QIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAI 432
++ +K+ LD + +A TPG AGAD+ N+ NEAA++AAR +A +TM+H E A
Sbjct: 355 HVHTRKIPLDKDVDLAV--IARGTPGMAGADLENLVNEAAILAARENAATVTMEHMERAK 412
Query: 433 DRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQY 492
D+V+ G E+K I++ E+R AYHE+GH + L +P+ KVTI+PRG A LG Q
Sbjct: 413 DKVLMGGERK-MFITEQEKRITAYHEAGHTIVAKLLPGTDPVHKVTIIPRGQA-LGVTQQ 470
Query: 493 VPNENLL-MTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFS 551
+P ++ K L + + LGGR AE+ + G +STGAQNDL+ V + V +G S
Sbjct: 471 LPEDDRYHYPKSYLMNRLSVALGGRQAERAVFGDLSTGAQNDLKMVNDLAEKMVCQWGMS 530
Query: 552 DKVGLLSFPQRDD------TFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREH 605
DK+G ++F + ++ K +S + +ID E+ + +A +I +R
Sbjct: 531 DKIGAMTFSRGEEHPFLGRKLAEEKTFSEQMAWLIDQEIAAIIKEAEQKADNVIANNRGK 590
Query: 606 VAQIAEELLEKEVLHQDDLVRVLGERP 632
+ + + L+E+E L + VL P
Sbjct: 591 LDALVDALMEEETLDGKRIDEVLASVP 617
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 200/487 (41%), Positives = 304/487 (62%)
Query: 191 FKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESG 250
F+++AG DE+K E++E V F+KN +KY E+GA++PKG LLVGPPG+GKT+LA+A A E+
Sbjct: 148 FEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATEAN 207
Query: 251 VPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXND 310
VP++ SG +F+E++VG G R+R LF AR APSIVFIDEIDAI
Sbjct: 208 VPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQ 267
Query: 311 -ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + TLNQLLVEMDGF T ++V+ TNR D LD ALLRPGRFDR + + PDI GR
Sbjct: 268 REHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRK 327
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
+I +IY+KK+K D + +++A LTPGF+GAD+ NV NEA ++A RN + +T+
Sbjct: 328 KILEIYIKKIKSDLKLEDI-EKIARLTPGFSGADLENVVNEATILATRNNKSLVTINELY 386
Query: 430 AAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE-HAEPLLKVTIVPRGTAALG 488
A D+V G E+K+ S +RR AYHE+GHA+ +FL+ +P+ K TI+ RG A LG
Sbjct: 387 EARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNA-LG 445
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQV 545
+ + +P ++ K Q+ + +GGR AE+++ GK S+GA +D+ + T++ Y V
Sbjct: 446 YVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKMV 505
Query: 546 AVYGFSDKVGLLSFPQR-DDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHRE 604
+G SDK+G L++ +R D + + S++T + I+ EV+ V K + +++ HR+
Sbjct: 506 TEWGMSDKLGPLNYKKRMGDGYSSNR-LSAQTVSSIEVEVKSLVEKGKSLSEEILRRHRK 564
Query: 605 HVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGFLEDDKESKETKEGGTA 664
+ +A LL+KE L +++ ++ K NY K L++D + E K +
Sbjct: 565 ELDNLAFALLDKETLSGEEIKNIIDPNNSK-----NYSG-KVEMLKNDTKKNEKKSNSVS 618
Query: 665 EDDNSSS 671
++ ++ S
Sbjct: 619 KNKSTIS 625
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 200/487 (41%), Positives = 304/487 (62%)
Query: 191 FKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESG 250
F+++AG DE+K E++E V F+KN +KY E+GA++PKG LLVGPPG+GKT+LA+A A E+
Sbjct: 148 FEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATEAN 207
Query: 251 VPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXND 310
VP++ SG +F+E++VG G R+R LF AR APSIVFIDEIDAI
Sbjct: 208 VPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQ 267
Query: 311 -ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + TLNQLLVEMDGF T ++V+ TNR D LD ALLRPGRFDR + + PDI GR
Sbjct: 268 REHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRK 327
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
+I +IY+KK+K D + +++A LTPGF+GAD+ NV NEA ++A RN + +T+
Sbjct: 328 KILEIYIKKIKSDLKLEDI-EKIARLTPGFSGADLENVVNEATILATRNNKSLVTINELY 386
Query: 430 AAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE-HAEPLLKVTIVPRGTAALG 488
A D+V G E+K+ S +RR AYHE+GHA+ +FL+ +P+ K TI+ RG A LG
Sbjct: 387 EARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNA-LG 445
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQV 545
+ + +P ++ K Q+ + +GGR AE+++ GK S+GA +D+ + T++ Y V
Sbjct: 446 YVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKMV 505
Query: 546 AVYGFSDKVGLLSFPQR-DDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHRE 604
+G SDK+G L++ +R D + + S++T + I+ EV+ V K + +++ HR+
Sbjct: 506 TEWGMSDKLGPLNYKKRMGDGYSSNR-LSAQTVSSIEVEVKSLVEKGKSLSEEILRRHRK 564
Query: 605 HVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKGFLEDDKESKETKEGGTA 664
+ +A LL+KE L +++ ++ K NY K L++D + E K +
Sbjct: 565 ELDNLAFALLDKETLSGEEIKNIIDPNNSK-----NYSG-KVEMLKNDTKKNEKKSNSVS 618
Query: 665 EDDNSSS 671
++ ++ S
Sbjct: 619 KNKSTIS 625
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 917 (327.9 bits), Expect = 5.4e-94, Sum P(2) = 5.4e-94
Identities = 207/509 (40%), Positives = 297/509 (58%)
Query: 125 NEVNWYQELMRFAPTALLFGALWFMGRK-MQSXXXXXXXXXXXXX-XIFNIGKATITKMD 182
N+ + QEL+ + G +W MG +Q + + K
Sbjct: 293 NKSRFAQELVSTILFTVAVGLVWIMGAAALQKYIGSLGGIGTSGVGSSSSYSPKELNKEI 352
Query: 183 MNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLA 242
K+ FKDV GCD+AKQE+ E V +LKNP K+ LG K+PKG LL G PGTGKTLLA
Sbjct: 353 TPEKNVKTFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLA 412
Query: 243 KATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXX 302
KA AGE+GVPF +GS+F EMFVGVG RVRSLFQ A++ AP I+FIDEIDA+
Sbjct: 413 KAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ 472
Query: 303 XXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDK 362
+ TL+QLLVEMDGF G++V+A TN PDILD AL RPGRFDR I +
Sbjct: 473 W-----EGHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPS 527
Query: 363 PDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQ 422
PD++GR++I ++YL+ + + + +A TPGF GAD+AN+ N AA+ AA + +
Sbjct: 528 PDVRGREEILELYLQGKPMSEDVDV--KAIARGTPGFNGADLANLVNIAAIKAAVEGAEK 585
Query: 423 ITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPR 482
++ + E A DR++ G E+K +S+ ++ AYHESGHA+ + A P+ K TI+PR
Sbjct: 586 LSSEQLEFAKDRIVMGTERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPR 645
Query: 483 GTAALGFAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTK 539
G+A LG +P N+ ++K QL + +GGR AE+++ G I+TGA +DL + T+
Sbjct: 646 GSA-LGMVTQLPSNDETSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATE 704
Query: 540 MTYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLI 599
+ V+ G S+ +G + +R P SS + ID EV + + +AY+ L+
Sbjct: 705 LAQYMVSSCGMSEAIGPVHIKER--------P-SSDMQSRIDAEVVKLLREAYERVKSLL 755
Query: 600 EEHREHVAQIAEELLEKEVLHQDDLVRVL 628
+ H + + +A LLE E L +D+ R+L
Sbjct: 756 KRHEKQLHTLANALLEYETLTAEDIKRIL 784
Score = 38 (18.4 bits), Expect = 5.4e-94, Sum P(2) = 5.4e-94
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 47 VTNKSVAKVFVKSTPRSTNETNDDF 71
VT+ + + V T S ETND F
Sbjct: 82 VTDSAESNRLVSDTEVSELETNDRF 106
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 201/483 (41%), Positives = 300/483 (62%)
Query: 170 IFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGAL 229
IF + + +D++ + V FKDV GCDEA+ E+ E V FLK+P K+ LG K+PKG L
Sbjct: 204 IFRNSETSDKSVDVS-QSTVRFKDVQGCDEARAELEEIVDFLKDPSKFTGLGGKLPKGVL 262
Query: 230 LVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVF 289
L GPPGTGKTLLA+ATAGE+GVPF MSGS+F E++VGVG R+R LF +AR AP+I+F
Sbjct: 263 LTGPPGTGKTLLARATAGEAGVPFFFMSGSEFDELYVGVGAKRIRELFSQARDKAPAIIF 322
Query: 290 IDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALL 349
IDE+DAI + TLNQLLVE+DGF T G++++ TN P+ LDKAL
Sbjct: 323 IDELDAIGGKRNPKDQAYA----KQTLNQLLVELDGFSQTEGIIIIGATNFPESLDKALT 378
Query: 350 RPGRFDRQITIDKPDIKGRDQIFQIYLKKLKL--DNEPSFYSQRLAALTPGFAGADIANV 407
RPGRFD+++ +D PD++GR I + +++ ++ D +PS +A TPG +GA++ N+
Sbjct: 379 RPGRFDKEVIVDLPDVRGRIDILKHHMQNVETADDVDPSI----IARGTPGLSGAELMNL 434
Query: 408 CNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWF 467
N+AA+ A++ + + M HFE A D+++ G KK VI++ R AYHE+GHA+ F
Sbjct: 435 VNQAAVHASQLSAPAVDMNHFEWAKDKILMGAAKKKMVITEESRINTAYHEAGHAIMAMF 494
Query: 468 LEHAEPLLKVTIVPRGTAALGFAQYVPN-ENLLMTKEQLFDMTCMTLGGRAAEQVLLGK- 525
+ A PL K TI+PRG A LG +P + + M+K++ F + +GG+ AE+++ GK
Sbjct: 495 SKGATPLYKATILPRGRA-LGITFQLPEMDKVDMSKQECFARLDVCMGGKIAEEMINGKE 553
Query: 526 -ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQR-DDTFEMTKPYSSKTGAIIDNE 583
+++G +DL T + A V YG SDK+G P R D +E P + DNE
Sbjct: 554 NVTSGCASDLSNATSVARAMVTSYGMSDKIG----PVRLSDDWESWSPQIRN---MADNE 606
Query: 584 VREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDR 643
VR+++ + T KL+ + R + ++AE LLE E L ++++ +V+ P ++ +
Sbjct: 607 VRDYLLDSEKRTRKLLYDKRLELKRLAEGLLEYETLTKEEMEKVVKGEPINKAKTMSNTV 666
Query: 644 FKK 646
KK
Sbjct: 667 IKK 669
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 899 (321.5 bits), Expect = 4.8e-93, Sum P(2) = 4.8e-93
Identities = 199/458 (43%), Positives = 280/458 (61%)
Query: 187 DKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 246
+ + F DVAG DEAK+E+ E V FLKNP +Y LGA+ P+G LLVG PGTGKTLLAKA A
Sbjct: 324 ETITFADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVA 383
Query: 247 GESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXX 306
GES VPF+S S S+F+E++VG+G SRVR LF A++ APSI+FIDEIDA+
Sbjct: 384 GESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRM 443
Query: 307 XXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 366
NDERE TLNQLL EMDGF +++ V+VL TNR D+LD AL RPGRFDR +T++ PD
Sbjct: 444 VSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKV 503
Query: 367 GRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQ 426
GR+ I ++++ K +L +A++T GF GAD+AN+ NEAAL+A R +
Sbjct: 504 GRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKI 563
Query: 427 HFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGW----FLEHAEPLLKVTIVPR 482
F A++R I G+EKK + E+ VA HE+GHAV G L + K++I+PR
Sbjct: 564 DFIHAVERSIAGIEKKTARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPR 623
Query: 483 GTAALGFAQYVP---NENLLMTKEQLFDMTCMTLGGRAAEQVLL-GKISTGAQNDLEKVT 538
ALGF Y+P + L+ ++L LGGRAAE+V+ G+ISTGA +D+ + T
Sbjct: 624 SGGALGFT-YIPPTHEDRYLLFIDELHGRLVTLLGGRAAEEVVYSGRISTGALDDIRRAT 682
Query: 539 KMTYAQVAVYGFSDKVG-----LLSFPQRDDTFEMTKPYSSKTGAIID---NEVREWVGK 590
M Y VA YG ++K+G LS DD+ P+ G ++D EV +
Sbjct: 683 DMAYKAVAEYGLNEKIGPVSVATLSAGGIDDSGG--SPWGRDQGHLVDLVQREVTNLLQS 740
Query: 591 AYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVL 628
A D + ++ + + + + +L ++E + ++L + L
Sbjct: 741 ALDVALTVVRANPDVLEGLGAQLEDEEKVEGEELQKWL 778
Score = 47 (21.6 bits), Expect = 4.8e-93, Sum P(2) = 4.8e-93
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 44 RIVVTNKSVAKVFVKSTPRSTNETNDDFTQSPVN-GSPDKRNLSQCKYYFNIGSVESF 100
R V K V V+ + PR + ++ V GSPDKR+ +FN G + F
Sbjct: 231 RSVAPTKRV--VYSTTRPRDIKTPYEKMLENNVEFGSPDKRSGG----FFNSGLIVLF 282
Score = 38 (18.4 bits), Expect = 4.3e-92, Sum P(2) = 4.3e-92
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 91 YFNIGSVESFEEKLEEAQEALGIDPHDYI 119
+ ++ V+ +E+LEE E L +P Y+
Sbjct: 328 FADVAGVDEAKEELEEIVEFLK-NPDRYV 355
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 900 (321.9 bits), Expect = 6.2e-93, Sum P(2) = 6.2e-93
Identities = 199/458 (43%), Positives = 283/458 (61%)
Query: 187 DKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 246
+ + F DVAG DEAK+E+ E V FL+NP+KY LGA+ P+G LLVG PGTGKTLLAKA A
Sbjct: 320 ETITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVA 379
Query: 247 GESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXX 306
GE+ VPF+S S S+F+E++VG+G SRVR LF A++ APSI+FIDEIDA+
Sbjct: 380 GEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRM 439
Query: 307 XXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 366
NDERE TLNQLL EMDGF + + V+VL TNR D+LD AL RPGRFDR +T++ PD
Sbjct: 440 GSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKI 499
Query: 367 GRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQ 426
GR+ I ++++ K +L +A++T GF GAD+AN+ NEAAL+A R +
Sbjct: 500 GRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKI 559
Query: 427 HFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEH---AEPLL-KVTIVPR 482
F A++R I G+EKK+ + E+ VA HE+GHAV G + + +P + K++I+PR
Sbjct: 560 DFIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPR 619
Query: 483 GTAALGFAQYVP---NENLLMTKEQLFDMTCMTLGGRAAEQVLL-GKISTGAQNDLEKVT 538
ALGF Y+P + L+ ++L LGGRAAE+V+ G+ISTGA +D+ + T
Sbjct: 620 TGGALGFT-YIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSGRISTGAFDDIRRAT 678
Query: 539 KMTYAQVAVYGFSDKVGLLSFPQR-----DDTFEMTKPYSSKTGAIID---NEVREWVGK 590
M Y VA YG + K+G +S DD+ P+ G ++D EV +
Sbjct: 679 DMAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGG--SPWGRDQGKLVDLVQKEVTILLQS 736
Query: 591 AYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVL 628
A D + ++ + + + + +L EKE + ++L + L
Sbjct: 737 ALDVALSVVRANPDVLEGLGAQLEEKEKVEGEELQKWL 774
Score = 45 (20.9 bits), Expect = 6.2e-93, Sum P(2) = 6.2e-93
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 63 STNETNDDFTQSPVNGSPDKRNLS---QCKYYFNIGSVESFEEKLEEAQEALGIDPHDYI 119
ST+ T T+ G PD +S + + ++ V+ +E+LEE E L +P Y+
Sbjct: 295 STSSTGQLRTRKA--GGPDGGKVSGGGETITFADVAGVDEAKEELEEIVEFLR-NPEKYV 351
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
Identities = 200/452 (44%), Positives = 290/452 (64%)
Query: 181 MDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTL 240
MD + K F DV G DEAK E+ E VH+L++PK++ LG K+PKG LLVGPPGTGKT+
Sbjct: 220 MDSSTK----FSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTM 275
Query: 241 LAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXX 300
LA+A AGE+GVPF S SGS+F EMFVGVG RVR LF A++C+P I+FIDEIDAI
Sbjct: 276 LARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSR 335
Query: 301 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITI 360
+ TLNQ+LVE+DGF G++V+A TN P+ LDKAL+RPGRFDR I +
Sbjct: 336 NPKD----QQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVV 391
Query: 361 DKPDIKGRDQIFQIYLKK-LKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNE 419
PD++GR QI + ++ K LK ++ +A TPGF+GAD+AN+ N AAL AA +
Sbjct: 392 PNPDVEGRRQILESHMSKVLKAEDVDLMI---IARGTPGFSGADLANLVNVAALKAAMDG 448
Query: 420 SAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTI 479
S +TM E A DR++ G E+K+ VIS R+ A+HE GHA+ E A P+ K TI
Sbjct: 449 SKDVTMSDLEFAKDRIMMGSERKSAVISDESRKLTAFHEGGHALVAIHTEGALPVHKATI 508
Query: 480 VPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEK 536
VPRG A LG +P+++ ++++Q+ + +GGR AE+++ G+ +++GA +DLE+
Sbjct: 509 VPRGMA-LGMVSQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLEQ 567
Query: 537 VTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTV 596
TK+ A V +G S +VGL++ DD K S++T +I++EV++ + KAY++
Sbjct: 568 ATKLARAMVTKFGMSKEVGLVAH-NYDDN---GKSMSTETRLLIESEVKQLLEKAYNNAK 623
Query: 597 KLIEEHREHVAQIAEELLEKEVLHQDDLVRVL 628
++ + + + +A LL+ E L + +L
Sbjct: 624 TILTVYNKELHALANALLQHETLSGKQIKELL 655
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 906 (324.0 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 196/462 (42%), Positives = 287/462 (62%)
Query: 185 AKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKA 244
AK V F DV GCDEA+ E+ E V FLK+P KYE LG K+PKG LL GPPGTGKTLLA+A
Sbjct: 274 AKTNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARA 333
Query: 245 TAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXX 304
TAGE+GV F MSGS+F E++VGVG R+R LF +AR AP+I+FIDE+DAI
Sbjct: 334 TAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKD 393
Query: 305 XXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPD 364
+ TLNQLLVE+DGF T+G++++ TN P+ LDKAL RPGRFD+ + +D PD
Sbjct: 394 QAYA----KQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPD 449
Query: 365 IKGRDQIFQIYLKKLKL-DN-EPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQ 422
++GR I + ++KK+ L DN +P+ +A TPG +GA++AN+ N+AA+ A + +
Sbjct: 450 VRGRADILKHHMKKITLADNVDPTI----IARGTPGLSGAELANLVNQAAVYACQKNAVS 505
Query: 423 ITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPR 482
+ M HFE A D+++ G E+K V++ R+ A+HE+GHA+ + A PL K TI+PR
Sbjct: 506 VDMSHFEWAKDKILMGAERKTMVLTDAARKATAFHEAGHAIMAKYTNGATPLYKATILPR 565
Query: 483 GTAALGFAQYVPN-ENLLMTKEQLFDMTCMTLGGRAAEQVLLGKIST--GAQNDLEKVTK 539
G A LG +P + + +TK + + +GG+ AE+++ GK +T G +DL+ T
Sbjct: 566 GRA-LGITFQLPEMDKVDITKRECQARLDVCMGGKIAEELIYGKDNTTSGCGSDLQSATG 624
Query: 540 MTYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLI 599
A V YG SD VG ++ + ++ +S+K I DNEV E + + + +L+
Sbjct: 625 TARAMVTQYGMSDDVGPVNLSENWES------WSNKIRDIADNEVIELLKDSEERARRLL 678
Query: 600 EEHREHVAQIAEELLEKEVLHQDDLVRVL-GERPFKHSEPTN 640
+ + ++A+ L+E E L ++ +V GE+ K TN
Sbjct: 679 TKKNVELHRLAQGLIEYETLDAHEIEQVCKGEKLDKLKTSTN 720
Score = 38 (18.4 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 48 TNKSVAKVFVKSTPRSTNETNDDFTQSPV 76
+NKS S P + TND Q+ V
Sbjct: 69 SNKSTISSIDNSQPPPPSNTNDKTKQANV 97
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 906 (324.0 bits), Expect = 7.3e-91, P = 7.3e-91
Identities = 198/464 (42%), Positives = 283/464 (60%)
Query: 182 DMNAKD-KVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTL 240
++N +D +V F DV G DEAK E+ E V +LK+P+KY LG ++PKG LLVGPPGTGKTL
Sbjct: 237 EVNPEDVQVTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTL 296
Query: 241 LAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXX 300
LA+A AGE+ VPF +GS+F E+ VG G RVR LF +A+ AP I+FIDEID++
Sbjct: 297 LARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKR 356
Query: 301 XXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITI 360
++ T+NQLL EMDGF G++V+A TNR D LDKALLRPGRFD ++T+
Sbjct: 357 VSNSIHPYANQ---TINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTV 413
Query: 361 DKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNES 420
KPD+ GR IF YL K+ + + LA + GF GADI N+ N+AAL AA + +
Sbjct: 414 PKPDLAGRVDIFNFYLSKIV--HSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNA 471
Query: 421 AQITMQHFEAAIDRVIGGLEKKNKVISKLE-RRTVAYHESGHAVAGWFLEHAEPLLKVTI 479
++TM + + A DRV+ G + I E R AYHE+GH + + + A PL KVTI
Sbjct: 472 VEVTMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTI 531
Query: 480 VPRGTAALGFAQYVPN-ENLLMTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEK 536
+PRG + LG +P ++ +TK Q+ + +GGR AE+++ G K++TGA +DL K
Sbjct: 532 IPRGQS-LGHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSK 590
Query: 537 VTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEMTK--PYSSKTGAIIDNEVREWVGKAYDH 594
T++ V V+G SDKVGL F +D+ + K + +T +ID E+ + ++Y
Sbjct: 591 ATQLAVQMVKVFGMSDKVGLRDFTAQDNESALVKVSDLAPQTAELIDAEINRVLQESYKR 650
Query: 595 TVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEP 638
++E ++ +AE LLE E L D++ RV+ + K P
Sbjct: 651 AKVILETKKKEHQLLAEALLEYETLSADEVKRVISGQKIKRPTP 694
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
Identities = 200/465 (43%), Positives = 282/465 (60%)
Query: 170 IFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGAL 229
+F I ++D + V F+DV GCDEAKQE+ E V FLK+P+K+ LG K+PKG L
Sbjct: 279 VFRIQLGNQVEVDPE-EINVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVL 337
Query: 230 LVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVF 289
LVGPPGTGKTLLA+A AGE+ VPF +G +F E+ VG G RVR LF+ A+ AP ++F
Sbjct: 338 LVGPPGTGKTLLARAVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIF 397
Query: 290 IDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALL 349
IDEID++ ++ T+NQLL EMDGF AGV+VL TNR D LD+ALL
Sbjct: 398 IDEIDSVGAKRTNSVLHPYANQ---TINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALL 454
Query: 350 RPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCN 409
RPGRFD ++ + PD GR +I +YL K+ L +E LA T GF GAD+ N+ N
Sbjct: 455 RPGRFDVEVMVSTPDFTGRKEILSLYLTKI-LHDEIDL--DMLARGTSGFTGADLENMIN 511
Query: 410 EAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLE 469
+AAL AA + + ++M+H E A D+V+ G E+K ++ + AYHE GHA+ ++ +
Sbjct: 512 QAALRAAIDGAETVSMKHLETARDKVLMGPERKARLPDEEANTITAYHEGGHAIVAFYTK 571
Query: 470 HAEPLLKVTIVPRGTAALGFAQYVPN-ENLLMTKEQLFDMTCMTLGGRAAEQVLLG--KI 526
+ PL KVTI+PRG + LG Y+P E +TK QL M +GGRAAE+++ G KI
Sbjct: 572 ESHPLHKVTIMPRGPS-LGHTAYIPEKERYHVTKAQLLAMMDTMMGGRAAEELVFGTDKI 630
Query: 527 STGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVRE 586
++GA +DL++ T + V +G SDKVGL + + T +D E++
Sbjct: 631 TSGASSDLKQATSIATHMVRDWGMSDKVGLRTI-EASKGLGTGDTLGPNTIEAVDAEIKR 689
Query: 587 WVGKAYDHTVKLIEEH-REHVAQIAEELLEKEVLHQDDLVRVLGE 630
+ +Y+ ++ +H REH A +AE LL+ E L DD+ +L E
Sbjct: 690 ILSDSYERAKAILRKHTREHKA-LAEALLKYETLDADDIKAILNE 733
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 884 (316.2 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
Identities = 186/443 (41%), Positives = 279/443 (62%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F+ V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTLLA+A AGE
Sbjct: 331 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 390
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+ VPF SGS+F EMFVGVG SR+R+LF+EA+ AP ++FIDE+D++
Sbjct: 391 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 450
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+ + T+NQLL EMDGF GV+++ TN P+ LD AL+RPGRFD Q+T+ +PD+KGR
Sbjct: 451 SRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 507
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I + YL K+K D S + +A T GF+GA++ N+ N+AAL AA + +TM+
Sbjct: 508 TEILKWYLNKIKFDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKEL 565
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+PRG LG
Sbjct: 566 EFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPT-LG 624
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQV 545
+P N+ T+ QL +++GGR AE+++ G I+TGA +D + TK+ V
Sbjct: 625 HVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMV 684
Query: 546 AVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREH 605
+G S+K+G++++ DT ++ S +T + I+ E+R + +Y+ +++ H +
Sbjct: 685 TKFGMSEKLGVMTY---SDTGKL----SPETQSAIEQEIRILLRDSYERAKHILKTHAKE 737
Query: 606 VAQIAEELLEKEVLHQDDLVRVL 628
+AE LL E L ++ VL
Sbjct: 738 HKNLAEALLTYETLDAKEIQIVL 760
Score = 38 (18.4 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 129 WYQELMRFAPTALLFGALWFMG 150
WY EL+ +L+F F G
Sbjct: 57 WYSELITVLVFSLIFKKHLFFG 78
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 184/447 (41%), Positives = 285/447 (63%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F DV GCDEAK E+ E V FL NP+++ LG K+PKG LLVGPPGTGKTLLA+A AGE
Sbjct: 312 VRFSDVHGCDEAKDELQELVEFLLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGE 371
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+GVPF MSGS+F E++VGVG RVR LF +AR +P+I+FIDE+DAI
Sbjct: 372 AGVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELDAIGAKRNERDAAYV 431
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+ TLNQLL E+DGF + GV++LA TN P++LDKAL RPGRFDR++ +D PD++GR
Sbjct: 432 ----KQTLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRPGRFDRKVVVDLPDVRGR 487
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
I + ++K +++ + +A T GF+GAD+ N+ N+AA+ A+RN+ +++T + F
Sbjct: 488 MDILKHHMKNVQISTDVDVAV--IARGTSGFSGADLENLVNQAAIFASRNKQSKVTPKDF 545
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
+ A D++I G E ++++I ++ AYHE+GHA+ +F + PL K+TI+PRG + LG
Sbjct: 546 DYAKDKIIMGAEARSRIIQDKDKLLTAYHEAGHALVAYFSPSSMPLYKITIMPRGMS-LG 604
Query: 489 FAQYVPNENLLMTK--EQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQ 544
++P +++ + L D+ +++GG+ AE+++ G K+++G DL T+ +
Sbjct: 605 STHFLPEMDMVSKNYVQYLSDID-VSMGGKVAEELIYGEDKVTSGISADLASATRTAFTL 663
Query: 545 VAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHRE 604
V +G+S K+G + D+ SS+T I+ EVR V +A ++ E R
Sbjct: 664 VTRFGYSKKLGNVDLYANYDSL------SSETKQEIEAEVRRLVEEARQRATNILTERRH 717
Query: 605 HVAQIAEELLEKEVLHQDDLVRVL-GE 630
+ + + L++ E L ++++ +VL GE
Sbjct: 718 ELELLTKALIKYETLTKEEMEKVLRGE 744
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 188/443 (42%), Positives = 283/443 (63%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F+ V G +EAK E+ E V FL+NP+K+ LG K+PKG LLVGPPGTGKTLLA+A AGE
Sbjct: 285 VTFEHVKGVEEAKNELQEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 344
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+ VPF SGS+F EMFVGVG SR+R+LF+EA+ AP ++FIDE+D++
Sbjct: 345 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGGKRIESPMHPY 404
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+ + T+NQLL EMDGF GV+++ TN P+ LD AL+RPGRFD Q+T+ +PD+KGR
Sbjct: 405 SRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 461
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I + YLKK+K+D+ + ++ +A T GF+GA++ N+ N+AAL AA + +TM+
Sbjct: 462 TEILKWYLKKIKVDS--AVEAEVIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKEL 519
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
E A D+++ G E+++ I K + AYHESGHA+ ++ + A P+ K TI+PRG LG
Sbjct: 520 EFAKDKILMGPERRSAEIDKRNKEITAYHESGHAIIAYYTKDAMPINKATIMPRGPT-LG 578
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQV 545
+P N+ T+ QL +++GGR AE+++ G I+TGA +D + TK+ V
Sbjct: 579 HVSMLPENDRWSETRAQLLAQMDVSMGGRVAEELIFGNENITTGASSDFDSATKIAKMMV 638
Query: 546 AVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREH 605
+G S+K+G++++ ++TK S +T A I++EVR + +Y+ L++ +
Sbjct: 639 TRFGMSEKLGVMTYS------DLTKQ-SPETQAAIEHEVRILLRDSYERAKALLKSRAKE 691
Query: 606 VAQIAEELLEKEVLHQDDLVRVL 628
+AE LL E L ++ VL
Sbjct: 692 HRNLAEALLRYETLDAKEIQLVL 714
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 190/443 (42%), Positives = 280/443 (63%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F+ V G +EAKQE+ E V FLKNP K+ LG K+PKG LLVGPPGTGKTLLA+A AGE
Sbjct: 275 VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 334
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+ VPF SGS+F EMFVGVG SR+RSLF+EA+ AP ++FIDE+D++
Sbjct: 335 ADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 394
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+ + T+NQLL EMDGF GVV++ TN P+ LD AL+RPGRFD Q+T+ KPD++GR
Sbjct: 395 SRQ---TINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGR 451
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I + YL K+K D S + +A T GF+GA++ N+ N+AAL AA + +TM+
Sbjct: 452 TEILKWYLNKIKYDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKEL 509
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
E + D+++ G E+++ I + + AYHESGHA+ ++ + A P+ K TI+ RGT LG
Sbjct: 510 EFSKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTT-LG 568
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQV 545
+P N+ T+ QL + +GGRAAE+++ G I+TGA +D + TK+ V
Sbjct: 569 HVSLLPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLMV 628
Query: 546 AVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREH 605
+G S+K+G++++ DT ++ S +T + I+ EVR + +Y+ +++ H +
Sbjct: 629 TRFGMSEKLGVMTYT---DTGKV----SPETQSAIEQEVRTLLRDSYERAKNILKTHAKE 681
Query: 606 VAQIAEELLEKEVLHQDDLVRVL 628
+AE LL+ E L ++ VL
Sbjct: 682 HKNLAEALLKYETLDAKEIQIVL 704
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 190/443 (42%), Positives = 280/443 (63%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F+ V G +EAKQE+ E V FLKNP K+ LG K+PKG LLVGPPGTGKTLLA+A AGE
Sbjct: 280 VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 339
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+ VPF SGS+F EMFVGVG SR+RSLF+EA+ AP ++FIDE+D++
Sbjct: 340 ADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 399
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+ + T+NQLL EMDGF GVV++ TN P+ LD AL+RPGRFD Q+T+ KPD++GR
Sbjct: 400 SRQ---TINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGR 456
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I + YL K+K D S + +A T GF+GA++ N+ N+AAL AA + +TM+
Sbjct: 457 TEILKWYLNKIKYDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKEL 514
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
E + D+++ G E+++ I + + AYHESGHA+ ++ + A P+ K TI+ RGT LG
Sbjct: 515 EFSKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTT-LG 573
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQV 545
+P N+ T+ QL + +GGRAAE+++ G I+TGA +D + TK+ V
Sbjct: 574 HVSLLPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLMV 633
Query: 546 AVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREH 605
+G S+K+G++++ DT ++ S +T + I+ EVR + +Y+ +++ H +
Sbjct: 634 TRFGMSEKLGVMTYT---DTGKV----SPETQSAIEQEVRTLLRDSYERAKNILKTHAKE 686
Query: 606 VAQIAEELLEKEVLHQDDLVRVL 628
+AE LL+ E L ++ VL
Sbjct: 687 HKNLAEALLKYETLDAKEIQIVL 709
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
Identities = 186/443 (41%), Positives = 280/443 (63%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F+ V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTLLA+A AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+ VPF SGS+F EMFVGVG SR+R+LF+EA+ AP ++FIDE+D++
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 397
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+ + T+NQLL EMDGF GV+++ TN P+ LD AL+RPGRFD Q+T+ +PD+KGR
Sbjct: 398 SRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I + YL K+K D S + +A T GF+GA++ N+ N+AAL AA + +TM+
Sbjct: 455 TEILKWYLNKIKFDK--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKEL 512
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+PRG LG
Sbjct: 513 EFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPT-LG 571
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQV 545
+P N+ T+ QL +++GGR AE+++ G I+TGA +D + TK+ V
Sbjct: 572 HVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMV 631
Query: 546 AVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREH 605
+G S+K+G++++ DT ++ S +T + I+ E+R + ++Y+ +++ H +
Sbjct: 632 TKFGMSEKLGVMTY---SDTGKL----SPETQSAIEQEIRILLRESYERAKHILKTHAKE 684
Query: 606 VAQIAEELLEKEVLHQDDLVRVL 628
+AE LL E L ++ VL
Sbjct: 685 HKNLAEALLTYETLDAKEIQIVL 707
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
Identities = 186/443 (41%), Positives = 280/443 (63%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F+ V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTLLA+A AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+ VPF SGS+F EMFVGVG SR+R+LF+EA+ AP ++FIDE+D++
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 397
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+ + T+NQLL EMDGF GV+++ TN P+ LD AL+RPGRFD Q+T+ +PD+KGR
Sbjct: 398 SRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I + YL K+K D S + +A T GF+GA++ N+ N+AAL AA + +TM+
Sbjct: 455 TEILKWYLNKIKFDK--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKEL 512
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+PRG LG
Sbjct: 513 EFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPT-LG 571
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQV 545
+P N+ T+ QL +++GGR AE+++ G I+TGA +D + TK+ V
Sbjct: 572 HVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMV 631
Query: 546 AVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREH 605
+G S+K+G++++ DT ++ S +T + I+ E+R + ++Y+ +++ H +
Sbjct: 632 TKFGMSEKLGVMTY---SDTGKL----SPETQSAIEQEIRILLRESYERAKHILKTHAKE 684
Query: 606 VAQIAEELLEKEVLHQDDLVRVL 628
+AE LL E L ++ VL
Sbjct: 685 HKNLAEALLTYETLDAKEIQIVL 707
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 186/443 (41%), Positives = 279/443 (62%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F+ V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTLLA+A AGE
Sbjct: 312 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 371
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+ VPF SGS+F EMFVGVG SR+R+LF+EA+ AP ++FIDE+D++
Sbjct: 372 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 431
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+ + T+NQLL EMDGF GV+++ TN P+ LD AL+RPGRFD Q+T+ +PD+KGR
Sbjct: 432 SRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 488
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I + YL K+K D S + +A T GF+GA++ N+ N+AAL AA + +TM+
Sbjct: 489 TEILKWYLNKIKFDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKEL 546
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+PRG LG
Sbjct: 547 EFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPT-LG 605
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQV 545
+P N+ T+ QL +++GGR AE+++ G I+TGA +D + TK+ V
Sbjct: 606 HVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMV 665
Query: 546 AVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREH 605
+G S+K+G++++ DT ++ S +T + I+ E+R + +Y+ +++ H +
Sbjct: 666 TKFGMSEKLGVMTY---SDTGKL----SPETQSAIEQEIRILLRDSYERAKHILKTHAKE 718
Query: 606 VAQIAEELLEKEVLHQDDLVRVL 628
+AE LL E L ++ VL
Sbjct: 719 HKNLAEALLTYETLDAKEIQIVL 741
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 186/443 (41%), Positives = 279/443 (62%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F+ V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTLLA+A AGE
Sbjct: 336 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 395
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+ VPF SGS+F EMFVGVG SR+R+LF+EA+ AP ++FIDE+D++
Sbjct: 396 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 455
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+ + T+NQLL EMDGF GV+++ TN P+ LD AL+RPGRFD Q+T+ +PD+KGR
Sbjct: 456 SRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 512
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I + YL K+K D S + +A T GF+GA++ N+ N+AAL AA + +TM+
Sbjct: 513 TEILKWYLNKIKFDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKEL 570
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+PRG LG
Sbjct: 571 EFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPT-LG 629
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQV 545
+P N+ T+ QL +++GGR AE+++ G I+TGA +D + TK+ V
Sbjct: 630 HVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMV 689
Query: 546 AVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREH 605
+G S+K+G++++ DT ++ S +T + I+ E+R + +Y+ +++ H +
Sbjct: 690 TKFGMSEKLGVMTY---SDTGKL----SPETQSAIEQEIRILLRDSYERAKHILKTHAKE 742
Query: 606 VAQIAEELLEKEVLHQDDLVRVL 628
+AE LL E L ++ VL
Sbjct: 743 HKNLAEALLTYETLDAKEIQIVL 765
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 181/443 (40%), Positives = 286/443 (64%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
+ F+ V G +EAK E+ + V FL+NP+K+ LG K+PKG LLVGPPGTGKTLLA+A AGE
Sbjct: 292 ITFEHVKGVEEAKNELQDVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 351
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+ VPF SGS+F EMFVGVG SR+R+LF+EA+ AP ++FIDE+D++
Sbjct: 352 ADVPFYYASGSEFDEMFVGVGASRIRNLFKEAKASAPCVIFIDELDSVGGKRIESPMHPY 411
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+ + T+NQLL EMDGF GV+V+ TN + LD AL+RPGRFD Q+T+ PD+KGR
Sbjct: 412 SRQ---TINQLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQVTVPIPDVKGR 468
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I + YLKK+K+D+ + ++ +A T GF+GA++ N+ N+AAL AA + +TM+
Sbjct: 469 TEILEWYLKKIKVDS--AIDAEIIARGTVGFSGAELENLVNQAALKAAADGKDLVTMKEL 526
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
+ A D+++ G E+++ I K + AYHESGHA+ ++ + A P+ K TI+PRG + LG
Sbjct: 527 KFAKDKILMGPERRSVEIDKRNKTITAYHESGHAIVAYYTKDAMPINKATIMPRGPS-LG 585
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLG--KISTGAQNDLEKVTKMTYAQV 545
+P N+ T+ QL +++GGR AE+++ G +I++GA +D + TK+ V
Sbjct: 586 HVSLLPENDRWSETRAQLLAQMDVSMGGRVAEELVFGNDQITSGASSDFDGATKIAQMMV 645
Query: 546 AVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREH 605
+G SDK+G++++ ++TK +S +T A ++ E+R + +Y+ K+++ + +
Sbjct: 646 TRFGMSDKLGVMTYS------DLTK-HSPETRAAVEQEIRVLLQSSYERAKKILKTYSKE 698
Query: 606 VAQIAEELLEKEVLHQDDLVRVL 628
+A+ LL E L+ ++ +L
Sbjct: 699 HKLLADALLTYETLNAKEIQMIL 721
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 186/445 (41%), Positives = 279/445 (62%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F+ V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTLLA+A AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+ VPF SGS+F EMFVGVG SR+R+LF+EA+ AP ++FIDE+D++
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 397
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+ + T+NQLL EMDGF GV+++ TN P+ LD AL+RPGRFD Q+T+ +PD+KGR
Sbjct: 398 SRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I + YL K+K D S + +A T GF+GA++ N+ N+AAL AA + +TM+
Sbjct: 455 TEILKWYLNKIKFDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKEL 512
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+PRG LG
Sbjct: 513 EFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPT-LG 571
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTG--AQNDLEKVTKMTYA 543
+P N+ T+ QL +++GGR AE+++ G I+TG A +D + TK+
Sbjct: 572 HVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGSDHITTGYCASSDFDNATKIAKR 631
Query: 544 QVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHR 603
V +G S+K+G++++ DT ++ S +T + I+ E+R + +Y+ +++ H
Sbjct: 632 MVTKFGMSEKLGVMTY---SDTGKL----SPETQSAIEQEIRILLRDSYERAKHILKTHA 684
Query: 604 EHVAQIAEELLEKEVLHQDDLVRVL 628
+ +AE LL E L ++ VL
Sbjct: 685 KEHKNLAEALLTYETLDAKEIQIVL 709
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 184/443 (41%), Positives = 278/443 (62%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F+ V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTLLA+A AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+ VPF SGS+F EMFVGVG SR+R+LF+EA+ AP ++FIDE+D++
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIEFPMHPY 397
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+ + T+ QLL EMDGF GV+++ TN P+ LD AL+RPGRFD Q+T+ +PD+KGR
Sbjct: 398 SRQ---TIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I + YL K+K D S + +A T GF+GA++ N+ N+AAL AA + +TM+
Sbjct: 455 TEILKWYLNKIKFDK--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKEL 512
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+PRG LG
Sbjct: 513 EFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPT-LG 571
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQV 545
+P N+ + QL +++GGR AE+++ G I+TGA +D + TK+ V
Sbjct: 572 HVSLLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMV 631
Query: 546 AVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREH 605
+G S+K+G++++ DT ++ S +T + I+ E+R + ++Y+ +++ H +
Sbjct: 632 TKFGMSEKLGVMTY---SDTGKL----SPETQSAIEQEIRILLRESYERAKHILKTHAKE 684
Query: 606 VAQIAEELLEKEVLHQDDLVRVL 628
+AE LL E L ++ VL
Sbjct: 685 HKNLAEALLTYETLDAKEIQIVL 707
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 176/400 (44%), Positives = 259/400 (64%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F+ V G +EAKQE+ E V FLKNP+K+ LG K+PKG LLVGPPGTGKTLLA+A AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+ VPF SGS+F EMFVGVG SR+R+LF+EA+ AP ++FIDE+D++
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPY 397
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
+ + T+NQLL EMDGF GV+++ TN P+ LD AL+RPGRFD Q+T+ +PD+KGR
Sbjct: 398 SRQ---TINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I + YL K+K D S + +A T GF+GA++ N+ N+AAL AA + +TM+
Sbjct: 455 TEILKWYLNKIKFDQ--SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKEL 512
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
E + D+++ G E+++ I + AYHESGHA+ ++ + A P+ K TI+PRG LG
Sbjct: 513 EFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPT-LG 571
Query: 489 FAQYVP-NENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQV 545
+P N+ T+ QL +++GGR AE+++ G I+TGA +D + TK+ V
Sbjct: 572 HVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMV 631
Query: 546 AVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVR 585
+G S+K+G++++ DT ++ S +T + I+ E+R
Sbjct: 632 TKFGMSEKLGVMTY---SDTGKL----SPETQSAIEQEIR 664
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 183/456 (40%), Positives = 277/456 (60%)
Query: 191 FKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESG 250
F DV G E K+E+ E V +L +P KY +GAK+PKG LL G PGTGKTLLA+A AGE+G
Sbjct: 299 FDDVKGIQEVKEELEEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKTLLARAIAGEAG 358
Query: 251 VPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXND 310
V FL +GS F E +VGVG RVR LF AR+ P I+FIDEIDA+
Sbjct: 359 VSFLYTTGSSFDEKYVGVGSRRVRELFNAAREKQPCIIFIDEIDAVGKSRNTA------- 411
Query: 311 ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQ 370
TL QLL EMDGF + ++++ TN P+ LD ALLRPGRFDR I++ PD+KGR +
Sbjct: 412 HHNETLLQLLTEMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKGRSE 471
Query: 371 IFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEA 430
I YLKK+K E + +A TPGF GAD++N+ N AA+ A +N I+++ +
Sbjct: 472 IIDHYLKKVKHTVEVK--ADTIARATPGFTGADLSNLINTAAIKAVQNGKETISIKQIDD 529
Query: 431 AIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFA 490
A D ++ G + N V+S+ RR AYHE+GHA+ E A+P+ K TIV RG A LG
Sbjct: 530 ARDDILMGRARLNAVMSEEARRNTAYHEAGHALVAAMTEAADPIHKATIVQRGQA-LGMV 588
Query: 491 QYVPN-ENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAV 547
+P +++ T++Q+ + L GRAAE++ G +++GA +D ++ + + ++ +
Sbjct: 589 SQLPEMDHVQYTRKQMMARLAICLAGRAAEEIFFGVDGVTSGASSDFQQASSLAFSMITK 648
Query: 548 YGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVA 607
+G SDKVG + + T P K II++EV++ + K Y ++ +LI ++R+++
Sbjct: 649 WGMSDKVGFIYHKDK------TSPEVQK---IIEDEVKDLLDKQYQYSKELIIKNRDNME 699
Query: 608 QIAEELLEKEVLHQDDLVRVLGER---PFKHSEPTN 640
++ +LLEKE L ++++++L + P +++ N
Sbjct: 700 KLVGQLLEKETLTGEEILKILNPKVTLPIQNNNNNN 735
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 185/451 (41%), Positives = 276/451 (61%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F DV G DEAK+E+ E V FL++P + LG K+P+G LL GPPGTGKT+LA+A AGE
Sbjct: 264 VRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGE 323
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+ VPF MSGS F EM+VGVG RVR LF AR+ APSI+FIDE+DAI
Sbjct: 324 ANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRNARDAA-- 381
Query: 309 NDERESTLNQLLVEMDGFGTTAG----VVVLAGTNRPDILDKALLRPGRFDRQITIDKPD 364
TLNQLLV++DGF VV + TN P+ LD AL RPGRFDR I + PD
Sbjct: 382 --HMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPD 439
Query: 365 IKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQIT 424
++GR I + + + L + +A T GFAGAD+AN+ N+AA+ A++N S ++
Sbjct: 440 VRGRLAILLQHTRHVPLGKDVDL--SIIARGTSGFAGADLANLINQAAVYASKNLSTAVS 497
Query: 425 MQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGT 484
M+ E + DR++ G E+K+ I+ + AYHE GHA+ F ++A K TI+PRG+
Sbjct: 498 MRDLEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMRPYKATIMPRGS 557
Query: 485 AALGFAQYVPN-ENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMT 541
+ LG +P+ + T+E+ M +T+GGRAAE++L GK I++GA ND++K T++
Sbjct: 558 S-LGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGKDKITSGAHNDIDKATQVA 616
Query: 542 YAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEE 601
V +G SD++G +S D S T A++++E++ + +Y+ ++ L++
Sbjct: 617 RRMVTEFGMSDRIGPVSLEAEMDNL------SPATRALVESEIKSLLEASYERSLSLLKS 670
Query: 602 HREHVAQIAEELLEKEVLHQDDLVRVL-GER 631
H++ + +A L++ E L +++ RV+ G+R
Sbjct: 671 HKKELDALATALVDYEFLTAEEMNRVVKGDR 701
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 194/476 (40%), Positives = 279/476 (58%)
Query: 191 FKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESG 250
F DV G +EAK E+ + V FL+NP+KY +PKG LLVGPPGTGKTLLAK+ AGE+
Sbjct: 163 FADVMGAEEAKGELQDLVDFLRNPEKYYRRNIVMPKGILLVGPPGTGKTLLAKSLAGEAR 222
Query: 251 VPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXND 310
V F++++GS+F E FVGVG RVR LF+ AR+ +P IVFIDEID++ N
Sbjct: 223 VSFITINGSEFEEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVGGSRTKRV----NY 278
Query: 311 ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQ 370
LNQLLVE+DGF GV+V+A TN D LD AL+R GRFDR I + PD K R
Sbjct: 279 HPSEALNQLLVELDGFDGREGVMVMAATNYQDSLDTALIRSGRFDRIIQVPLPDGKARKS 338
Query: 371 IFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEA 430
I YLK + + + + +A TPGF+GAD+ N+ N AAL ++ +ITM+ E
Sbjct: 339 IIDHYLKDKPIASHVN--TTTIAQSTPGFSGADLFNLVNWAALETTKHNLPEITMEQLEN 396
Query: 431 AIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFA 490
A + ++ G E+ + ++S R+ A+HE+GHA+ A + K TI+PRG A LG
Sbjct: 397 AKENLMMGKERHSLLMSDEARKICAFHEAGHALVAIMTPGARTVHKATIMPRGDA-LGLV 455
Query: 491 QYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQVAVY 548
+ E +TK+QL + +GGRAAE+++LGK IS GA +D++K T + A V+ Y
Sbjct: 456 SMLEKEETFVTKKQLIAQMDVAMGGRAAEELILGKENISQGASSDIQKATSIAKAMVSNY 515
Query: 549 GFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHVAQ 608
G S+KVG + + Q + K SS ++D+EV+ + +Y +L++++ +
Sbjct: 516 GMSEKVGQI-YIQSE------KKLSSAQRELVDSEVKSLLDSSYIRATQLLKKYSKEHHL 568
Query: 609 IAEELLEKEVLHQDDLVRVLGERPF---KHSEPTNYDR--FKKGFLEDDKESKETK 659
IA LLE E L D++ ++ + K+ E +R KK ED K+ K K
Sbjct: 569 IANALLEYETLSLDEIKDIIASKSLANKKNREQLIKEREELKKKRDEDFKKQKVFK 624
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 174/440 (39%), Positives = 258/440 (58%)
Query: 188 KVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
KV F DV GCDE KQE+ E + +LKN K+ ++GAK+PKG LL G PGTGKTL+A+A AG
Sbjct: 250 KVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAG 309
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
E+ VPFL SGS+F EMFVGVG R+R LFQ A++ AP IVFIDEIDA+
Sbjct: 310 EANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSSRD--- 366
Query: 308 XNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 367
N TLNQLLVE+DGF G+VV+ TN P LDKAL+RPGR D+ I + PDIKG
Sbjct: 367 -NSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKG 425
Query: 368 RDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQH 427
R +I ++Y K+ L + + L+ T G GAD+ N+ N AA+ + + M
Sbjct: 426 RYEILKMYSNKIVLSKDVDLHV--LSRRTVGMTGADLNNILNIAAIKCSVEGKKSVDMNS 483
Query: 428 FEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAAL 487
E A DRV+ GL++K+ +++ E+ AYHE GH + ++ + ++P+ K TI+PRG + L
Sbjct: 484 IEQAFDRVVVGLQRKSP-LNEEEKNITAYHEGGHTLVNFYTKGSDPVHKATIMPRGMS-L 541
Query: 488 GFAQYVPNENLLMTK-EQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQ 544
G +P + K + + + +GG +E+++ GK ++TG +DL+K T + +
Sbjct: 542 GVTWKIPISDKYSQKIKDVQSEIDILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQSL 601
Query: 545 VAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHRE 604
V YG +S D +++ K ID ++ + +Y+ ++ +H +
Sbjct: 602 VMNYGVGINEDNISMFLHDKQ-NISEEMKIK----IDKSIQRILLDSYNRAKNVLNQHID 656
Query: 605 HVAQIAEELLEKEVLHQDDL 624
+ +IA L+E E L D++
Sbjct: 657 ELHRIASALVEYETLTSDEI 676
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 174/440 (39%), Positives = 258/440 (58%)
Query: 188 KVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
KV F DV GCDE KQE+ E + +LKN K+ ++GAK+PKG LL G PGTGKTL+A+A AG
Sbjct: 250 KVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAG 309
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
E+ VPFL SGS+F EMFVGVG R+R LFQ A++ AP IVFIDEIDA+
Sbjct: 310 EANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSSRD--- 366
Query: 308 XNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 367
N TLNQLLVE+DGF G+VV+ TN P LDKAL+RPGR D+ I + PDIKG
Sbjct: 367 -NSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLPDIKG 425
Query: 368 RDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQH 427
R +I ++Y K+ L + + L+ T G GAD+ N+ N AA+ + + M
Sbjct: 426 RYEILKMYSNKIVLSKDVDLHV--LSRRTVGMTGADLNNILNIAAIKCSVEGKKSVDMNS 483
Query: 428 FEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAAL 487
E A DRV+ GL++K+ +++ E+ AYHE GH + ++ + ++P+ K TI+PRG + L
Sbjct: 484 IEQAFDRVVVGLQRKSP-LNEEEKNITAYHEGGHTLVNFYTKGSDPVHKATIMPRGMS-L 541
Query: 488 GFAQYVPNENLLMTK-EQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMTYAQ 544
G +P + K + + + +GG +E+++ GK ++TG +DL+K T + +
Sbjct: 542 GVTWKIPISDKYSQKIKDVQSEIDILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQSL 601
Query: 545 VAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHRE 604
V YG +S D +++ K ID ++ + +Y+ ++ +H +
Sbjct: 602 VMNYGVGINEDNISMFLHDKQ-NISEEMKIK----IDKSIQRILLDSYNRAKNVLNQHID 656
Query: 605 HVAQIAEELLEKEVLHQDDL 624
+ +IA L+E E L D++
Sbjct: 657 ELHRIASALVEYETLTSDEI 676
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 650 (233.9 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
Identities = 135/292 (46%), Positives = 192/292 (65%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
+ F DVAG DE K E+ E V FL+NPKKY+E G K+PKG L+VGPPG GKTL+AKA AGE
Sbjct: 149 ITFNDVAGVDEVKMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGE 208
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+GVPF SGS F+E++VG+G RVR LF +A+ APSIVFIDEIDA+
Sbjct: 209 AGVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMS---- 264
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
N ER+STLNQLL +MDGF +GV+V+A TN+ +++D ALLR GRFDR+I + PD K R
Sbjct: 265 NVERDSTLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDR 324
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I +IY+K D + ++A + GF+GA + + NEAA+ A R SA + F
Sbjct: 325 LKILEIYMK----DKNNNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDF 380
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIV 480
A +++V+ G +KK + E++ A +++ A++ ++L+ K+T++
Sbjct: 381 YAVLNKVLLG-KKKILSFNNEEKKIQATYQAAKALSAYYLDIG--FEKITLI 429
Score = 318 (117.0 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 77/232 (33%), Positives = 135/232 (58%)
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
N ER+STLNQLL +MDGF +GV+V+A TN+ +++D ALLR GRFDR+I + PD K R
Sbjct: 265 NVERDSTLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDR 324
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I +IY+K D + ++A + GF+GA + + NEAA+ A R SA + F
Sbjct: 325 LKILEIYMK----DKNNNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDF 380
Query: 429 EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 488
A +++V+ G +KK + E++ A +++ A++ ++L+ K+T++
Sbjct: 381 YAVLNKVLLG-KKKILSFNNEEKKIQATYQAAKALSAYYLDIG--FEKITLIEDR----- 432
Query: 489 FAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKM 540
F +Y E+ + +K +L + + L G A +++ + T +Q+D K+ ++
Sbjct: 433 FKEY---EHNIRSKSELINRIKVYLAGSRAMKLIYNESYTNSQDDFLKIKEL 481
Score = 48 (22.0 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
Identities = 8/32 (25%), Positives = 20/32 (62%)
Query: 597 KLIEEHREHVAQIAEELLEKEVLHQDDLVRVL 628
+ + ++ + +++E LLEKE + DD+ ++
Sbjct: 505 EFLNSMKDKILKLSELLLEKEKIEYDDVKDIM 536
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 128/254 (50%), Positives = 174/254 (68%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F DV G D AK E++E V L+ Y++LGA++P+G LLVGPPGTGKTLLA+A AGE
Sbjct: 331 VGFDDVEGVDSAKDELVEIVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTLLARAVAGE 390
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+GVPF S+S S+F+E+FVG G +R+R LF AR+ +PSI+FIDE+DA+
Sbjct: 391 AGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKRGRSF---- 446
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
NDER+ TLNQLL EMDGF + V+V+A TNRP+ LD AL RPGRF R++ + +PD +GR
Sbjct: 447 NDERDQTLNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGR 506
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I I+L+ + L+ + +A+LTPGF GAD+AN+ NEAAL+AAR + +
Sbjct: 507 RKILAIHLRDVPLEEDAFLICDLVASLTPGFVGADLANIVNEAALLAARRGGEAVAREDI 566
Query: 429 EAAIDRVIGGLEKK 442
AI+R G+ K
Sbjct: 567 MEAIERAKFGINDK 580
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 622 (224.0 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
Identities = 162/460 (35%), Positives = 255/460 (55%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F DVAG + + E+ E V F + + Y G KIP G LL GPPG GKTLLAKA AGE
Sbjct: 407 VKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGE 466
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXX 308
+GV F S+S S F+E++VGVG SRVR+L+QEAR+ APS+VFIDE+DA+
Sbjct: 467 AGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGSG- 525
Query: 309 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 368
ER++TLNQLLV +DGF V+ +A TNRPDILD AL+RPGRFDR+I I KP + GR
Sbjct: 526 GQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 585
Query: 369 DQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHF 428
+I Q++ +K + + + + +A++T G GA++AN+ AA+ R+ ++T
Sbjct: 586 MEILQVHARKKPMAEDLDYMA--VASMTDGMVGAELANIVEIAAINMMRDGRTELTTDDL 643
Query: 429 -EAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAAL 487
+AA G L++K++ + R VA +E+ AV + + +TI PR L
Sbjct: 644 LQAAQIEERGMLDRKDRSLETW--RQVAINEAAMAVVAVNFPDMKNIEFLTINPRAGREL 701
Query: 488 GFAQ----YVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLGK--ISTGAQNDLEKVTKMT 541
G+ + ++ + +++++ + D + L RAA+++ G+ +ST + +
Sbjct: 702 GYVRVKMDHIKFKEGMLSRQSILDHITVQLAPRAADELWYGEDQLST-IWAETSDNARSA 760
Query: 542 YAQVAVYGFSDKV-GLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIE 600
+ + G SDK GL +F D + ID E + Y+ +++
Sbjct: 761 ARSLVLGGLSDKHHGLNNFWVADRIND------------IDVEALRILNMCYERAKEILG 808
Query: 601 EHREHVAQIAEELLEKEVLHQDD---LVRVLGE-RPFKHS 636
+R + ++ E+L++K+ L + + LV + G +P S
Sbjct: 809 RNRTLMDEVVEKLVQKKSLTKQEFFTLVELYGSSKPMPPS 848
Score = 37 (18.1 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 97 VESFEEKLEEAQEALGIDPHDYIPVTYE 124
+E EE+ EE +E G + + Y+ + +
Sbjct: 355 MEGIEEEDEEVEEGTG-EKNPYLQMAMQ 381
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 642 (231.1 bits), Expect = 1.5e-62, P = 1.5e-62
Identities = 151/359 (42%), Positives = 211/359 (58%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGE 248
V F DVAG DEA E+ E V +LKNP ++++G K P G LL GPPG GKTL+AKA AGE
Sbjct: 427 VKFADVAGIDEAVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 486
Query: 249 SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXX-------X 301
+GVPF M+GS+F+E+ VGVG +R+R LF+ A+ PS++FIDEIDA+
Sbjct: 487 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENS 546
Query: 302 XXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITID 361
ERE+TLNQLL+E+DGF T GV+ L TNR D+LD ALLRPGRFDR+I +
Sbjct: 547 DQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVR 606
Query: 362 KPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESA 421
P+ KGR I +I+ K+K+ + S A+ PG++GA +A + EAAL+A R
Sbjct: 607 PPNAKGRLDILKIHASKVKMSDSVDLSSY--ASNLPGWSGAKLAQLVQEAALVAVRKTHN 664
Query: 422 QITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFL---EHA--EPLLK 476
I + A+DR+ G + + + A E G A+ L E+A E +
Sbjct: 665 SILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLLLRYENAKIERCDR 724
Query: 477 VTIVPRG-TAALGFAQYVPNENLLMTK-EQLFDMTCMTLGGRAAEQVLLGKISTGAQND 533
V+I+PRG T + + +E+ + + QL + LGGRAAE+V+ G ++ A D
Sbjct: 725 VSIIPRGQTLSQVVFHRLDDESYMFGRLPQLLHRLQVLLGGRAAEEVIYGSDTSKASVD 783
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 629 (226.5 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 159/439 (36%), Positives = 233/439 (53%)
Query: 193 DVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 252
DV G + AK+ ++E V +LK P+K G KIP G L GPPGTGKTLLAKA AGE +P
Sbjct: 852 DVIGLERAKRRLIEVVSWLKAPEKLLNFGIKIPTGFLFSGPPGTGKTLLAKAVAGECELP 911
Query: 253 FLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDER 312
F S++ S+ G ++ LF AR+ APSI+FIDEIDAI D +
Sbjct: 912 FFSVAASELSTPHSGGTTENIKQLFATARKYAPSIIFIDEIDAIAAQRTDNSDGSSRD-K 970
Query: 313 ESTLNQLLVEMDGFGTT-AGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQI 371
T+N LL EMDGF V V+A TN P +LD A+ RPGRFD I D P+ R
Sbjct: 971 NLTVNALLTEMDGFSIAEVPVFVMAATNHPQLLDSAITRPGRFDETIYCDLPNKNARLIF 1030
Query: 372 FQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAA 431
F+ + K KL N Q+L + G + A+I V E+ + A E+ Q+T +H +
Sbjct: 1031 FKRFASKHKL-NWQETELQQLVSSAQGMSSAEIDQVLRES-IYQAVGENQQLTTEHIKQT 1088
Query: 432 IDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGF-A 490
+ R++ G + + E+R AYHE+ H +A L +P+ +TI PR A LGF A
Sbjct: 1089 MIRIVYGAPSDHIFLGAEEKRRTAYHEAAHLLAYKLLFPKQPIDFITIEPRNQA-LGFVA 1147
Query: 491 QYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLG---KISTGAQNDLEKVTKMTYAQVAV 547
E +K ++ + L GR AE++ G ++STGA ND+EK T++ A A+
Sbjct: 1148 TRASEEYESYSKRRVMHKLQVLLAGRVAEKLCTGDCEEVSTGASNDIEKATQL--AMHAI 1205
Query: 548 Y--GFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREH 605
Y G VG ++ +TK S A V++W+ ++ +L+++H +
Sbjct: 1206 YEGGIEPTVGPVNIAM------LTKFEESDLLANAQQAVKQWLDQSEQQVEQLLKDHYQQ 1259
Query: 606 VAQIAEELLEKEVLHQDDL 624
+ +AE LL+KE L +++
Sbjct: 1260 LTLVAETLLDKESLLGEEI 1278
Score = 38 (18.4 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 111 LGIDPHDYIPVTYENEVNWYQELMRF 136
L I+ Y+ N++N YQE++ F
Sbjct: 575 LQINHFVYLAEKELNKINDYQEMLDF 600
>TIGR_CMR|CPS_1795 [details] [associations]
symbol:CPS_1795 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 HOGENOM:HOG000133952 ProtClustDB:CLSK741075
RefSeq:YP_268526.1 ProteinModelPortal:Q484I9 STRING:Q484I9
GeneID:3521104 KEGG:cps:CPS_1795 PATRIC:21466745
BioCyc:CPSY167879:GI48-1865-MONOMER Uniprot:Q484I9
Length = 1301
Score = 621 (223.7 bits), Expect = 1.6e-59, P = 1.6e-59
Identities = 159/439 (36%), Positives = 233/439 (53%)
Query: 193 DVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 252
DV G AK +++ + ++K P K + KIP G L GPPGTGKT LAKA AGE G+P
Sbjct: 869 DVIGLQRAKNRLLDVIEWMKFPDKLQNFDVKIPTGFLFAGPPGTGKTFLAKAVAGECGLP 928
Query: 253 FLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDER 312
F S+S S+ +G ++ +LF AR+ APSIVFIDEIDAI ER
Sbjct: 929 FFSVSASELSSTIIGGSSEKIMALFSVARKYAPSIVFIDEIDAIASQRSEDSQGNSR-ER 987
Query: 313 ESTLNQLLVEMDGFGTTAG-VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQI 371
+ +N LL EMDGF ++ V V+A TN P +LDKA+LRPGRFD I D P+ + R
Sbjct: 988 NAIVNTLLTEMDGFSSSESPVFVMAATNYPQLLDKAILRPGRFDETIFCDLPNSEARTIF 1047
Query: 372 FQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAA 431
F+ + +K L + S + L + + G + A+I V EA A E +T++H +
Sbjct: 1048 FEKFAQKQNLQWQQSDLTA-LVSSSQGMSSAEIDQVLREAIYQAVGTEKP-LTIEHIKQT 1105
Query: 432 IDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGF-A 490
I RV+ G +N + K E+R A+HE+ H + L + + TI PR + LGF A
Sbjct: 1106 IVRVVYGSPSENIKLGKEEKRRTAFHEAAHLLTYKLLFPNQIIDFATIEPRNQS-LGFVA 1164
Query: 491 QYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLG---KISTGAQNDLEKVTKMTYAQVAV 547
E +K ++ + + L GR AE++ +ISTGA ND+EK T++ A A+
Sbjct: 1165 TRASEEYESYSKTRVMNKLQVLLAGRVAEKLCTNNADEISTGASNDIEKATQL--AMHAI 1222
Query: 548 Y--GFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREH 605
Y G + VG ++ +TK S+ A V++W+ A KL+ ++
Sbjct: 1223 YDGGIEESVGPVNVGI------LTKFEESELLAKAQKAVQQWLITAEQSVEKLLNDNCHQ 1276
Query: 606 VAQIAEELLEKEVLHQDDL 624
+ +A LLEKE L D++
Sbjct: 1277 LELVANTLLEKESLLSDEI 1295
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 575 (207.5 bits), Expect = 1.9e-55, P = 1.9e-55
Identities = 158/473 (33%), Positives = 242/473 (51%)
Query: 172 NIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLV 231
++GK+ + K V F D AG + K+E+ E V LKN ++++ G PKG LL
Sbjct: 296 SLGKSRAKFISAEEKTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 355
Query: 232 GPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFID 291
GPPGTGKTLLAKA AGE+G+PF + +G+DF+EMFVGV SRV+ LF +R APSI+FID
Sbjct: 356 GPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFID 415
Query: 292 EIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFG-TTAGVVVLAGTNRPDILDKALLR 350
EIDAI ERE L Q+L EMDGF TT+ V+V+ TNR DILD ALLR
Sbjct: 416 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLR 475
Query: 351 PGRFDRQITIDKPDIKGRDQIFQIYLKK--LKLDNEPSFYSQRLAALTPGFAGADIANVC 408
GRFD+ I + P GR I +++ + + ++E Q +A T F GA++ NV
Sbjct: 476 KGRFDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVL 535
Query: 409 NEAALIAARNESAQITMQHFEAAIDRVIG----GLEKKNKVISKLERRTVAYHESGHAVA 464
NEA ++ AR + I + A+ R G G E +V +L+ R +AY E+ AV
Sbjct: 536 NEAGILTARKDLDYIGREELLEALKRQKGTFETGQEDSTEVPEELKLR-LAYREAAVAVL 594
Query: 465 GWFL-EHAEPLLKVTIVP-RGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVL 522
+L + P+ + I R + +++ + + K + R E+ +
Sbjct: 595 ACYLPDQYRPISETDINSIRSQPNMRYSE--TSGRVFARKSDYVNSIIRACAPRVVEEEM 652
Query: 523 LGKIST---GAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAI 579
G + A++ LE + + + G + G + + D P K A+
Sbjct: 653 FGIENLCWISAKSTLEASQRAEFL-ILQTGMT-AFGKAYYRNQRDLVPNLVP---KLEAL 707
Query: 580 IDNEVREWVGKAYDHTVKLIEEHREHVAQIAEELLEKEVLHQDDLVRVLGERP 632
D E++ A + +++E++ + +I + LLEK + D++ + P
Sbjct: 708 RD----EYMRFAVEKCSSILQEYQSALEEITDVLLEKGEIKADEIWNIYNTAP 756
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 540 (195.1 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 114/277 (41%), Positives = 169/277 (61%)
Query: 181 MDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKT 239
M+++ + V ++D+ G ++ QEI E V LK+P+ +E++G + PKG LL GPPGTGKT
Sbjct: 159 MEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKT 218
Query: 240 LLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXX 299
LLAKA A E+ F+ + GS+ ++ F+G G S V+ +F+ A++ APSI+FIDEIDAI
Sbjct: 219 LLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAK 278
Query: 300 XXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQIT 359
E + TL QLL EMDGF V ++ TNRPDILD A+LRPGRFDR I
Sbjct: 279 RTDALTGGDR-EVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIE 337
Query: 360 IDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNE 419
+ PD KGR +I +I+ +K+ L + + + +A +T G GA++ +C EA + A R
Sbjct: 338 VPAPDEKGRLEILKIHTRKMNLAEDVNL--EEIAKMTEGCVGAELKAICTEAGMNAIREL 395
Query: 420 SAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAY 456
+TM F A++++ +EKK + + V Y
Sbjct: 396 RDYVTMDDFRKAVEKI---MEKKKVKVKEPAHLDVLY 429
Score = 42 (19.8 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 22/92 (23%), Positives = 38/92 (41%)
Query: 34 NKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNETNDDFTQSPVNGSPDKRNLSQCKYYFN 93
+++ P L+ VV KV VKS+ + N +P + +P KR C
Sbjct: 85 DRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKR---VCLNQQT 141
Query: 94 IGSVESFEEKLEEAQEALGIDPHDYIPVTYEN 125
+ V+ E + +A+ +D V YE+
Sbjct: 142 LTVVDVLPENKDYRAKAMEVDERPN--VRYED 171
>WB|WBGene00021615 [details] [associations]
symbol:Y47C4A.1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR000642 InterPro:IPR003959 Pfam:PF00004
Pfam:PF01434 GO:GO:0005524 GO:GO:0006508 GO:GO:0004222
GeneTree:ENSGT00530000063070 HSSP:Q9LCZ4 EMBL:FO080095
EMBL:FO081691 RefSeq:NP_508083.1 RefSeq:NP_872265.1
UniGene:Cel.28965 UniGene:Cel.33161 ProteinModelPortal:G5EGR7
SMR:G5EGR7 EnsemblMetazoa:Y108F1.1 EnsemblMetazoa:Y47C4A.1
GeneID:189973 GeneID:353491 KEGG:cel:CELE_Y108F1.1
KEGG:cel:CELE_Y47C4A.1 CTD:189973 CTD:353491 WormBase:Y108F1.1
WormBase:Y47C4A.1 NextBio:944244 Uniprot:G5EGR7
Length = 238
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 99/168 (58%), Positives = 126/168 (75%)
Query: 311 ERESTLNQLLVEMDGFGTTAG-VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E E TLNQLLVEMD G+ G VVVLA TNR D+LDKALLRPGRFDR I+ID P + R
Sbjct: 54 EEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERK 113
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
+F++Y++K+KLD+ P YSQRLA LTP F GADI NVCNE+A+ AA N+ +T++ E
Sbjct: 114 DMFELYMRKIKLDHAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASNKCHVVTIKDME 173
Query: 430 AAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKV 477
A+DRV+ G EK+++ + + ER VAYHE+GHA+ GW LEH + LLKV
Sbjct: 174 YALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKV 221
>WB|WBGene00022429 [details] [associations]
symbol:Y108F1.1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR000642 InterPro:IPR003959 Pfam:PF00004
Pfam:PF01434 GO:GO:0005524 GO:GO:0006508 GO:GO:0004222
GeneTree:ENSGT00530000063070 HSSP:Q9LCZ4 EMBL:FO080095
EMBL:FO081691 RefSeq:NP_508083.1 RefSeq:NP_872265.1
UniGene:Cel.28965 UniGene:Cel.33161 ProteinModelPortal:G5EGR7
SMR:G5EGR7 EnsemblMetazoa:Y108F1.1 EnsemblMetazoa:Y47C4A.1
GeneID:189973 GeneID:353491 KEGG:cel:CELE_Y108F1.1
KEGG:cel:CELE_Y47C4A.1 CTD:189973 CTD:353491 WormBase:Y108F1.1
WormBase:Y47C4A.1 NextBio:944244 Uniprot:G5EGR7
Length = 238
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 99/168 (58%), Positives = 126/168 (75%)
Query: 311 ERESTLNQLLVEMDGFGTTAG-VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E E TLNQLLVEMD G+ G VVVLA TNR D+LDKALLRPGRFDR I+ID P + R
Sbjct: 54 EEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERK 113
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
+F++Y++K+KLD+ P YSQRLA LTP F GADI NVCNE+A+ AA N+ +T++ E
Sbjct: 114 DMFELYMRKIKLDHAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASNKCHVVTIKDME 173
Query: 430 AAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKV 477
A+DRV+ G EK+++ + + ER VAYHE+GHA+ GW LEH + LLKV
Sbjct: 174 YALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKV 221
>WB|WBGene00022222 [details] [associations]
symbol:Y73B3A.21 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR000642 Pfam:PF01434 GO:GO:0005524
GO:GO:0006898 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 EMBL:FO081721 RefSeq:NP_508082.2
ProteinModelPortal:Q95XE1 SMR:Q95XE1 STRING:Q95XE1 PaxDb:Q95XE1
EnsemblMetazoa:Y73B3A.21 GeneID:190639 KEGG:cel:CELE_Y73B3A.21
UCSC:Y73B3A.21 CTD:190639 WormBase:Y73B3A.21 OMA:GEAYERT
NextBio:946466 Uniprot:Q95XE1
Length = 242
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 102/210 (48%), Positives = 143/210 (68%)
Query: 406 NVCNEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAG 465
NVCNE+A+ AA N+ +T++ E A+DRV+ G EK+++ + + ER VAYHE+GHA+ G
Sbjct: 2 NVCNESAIRAAFNKCHVVTIKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVG 61
Query: 466 WFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL-LMTKEQLFDMTCMTLGGRAAEQVLLG 524
W LEH + LLKVTI+P+ +AALGFAQY P ++ L +K++LFD CM LGGR AE + G
Sbjct: 62 WMLEHTDALLKVTIIPQTSAALGFAQYSPRDDKHLYSKDELFDRMCMMLGGRCAENLKFG 121
Query: 525 KISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEV 584
+I++GAQ+DL+KVTK YAQV +YG S VG LSFP + F++ KPYS K + D E
Sbjct: 122 RITSGAQDDLQKVTKSAYAQVKLYGMSSIVGPLSFPNTEG-FQI-KPYSKKFASTFDQEA 179
Query: 585 REWVGKAYDHTVKLIEEHREHVAQIAEELL 614
V KA + T LI+ + + + + LL
Sbjct: 180 TLIVAKANEATTDLIKNNMDKLETVCARLL 209
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 468 (169.8 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 106/284 (37%), Positives = 158/284 (55%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
++ K+D + + + D+ G + QEI E V L +P+ YEE+G K PKG +L G PG
Sbjct: 173 SVMKLDKSPTES--YADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPG 230
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTLLAKA A ++ FL + GS+ ++ ++G GP R +FQ A APSIVFIDEIDA
Sbjct: 231 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDA 290
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I E + T+ +LL ++DGF + V+ TN+ + LD AL+RPGR D
Sbjct: 291 IGTKRYESTSGGER-EIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRID 349
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I + PD + +I I+ K+ L ++ + + +GADI +C EA L+A
Sbjct: 350 RKILFENPDANTKKKILTIHTSKMSLADDVNL--DEIVTGKDDLSGADIKAICTEAGLLA 407
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTVAYHES 459
R Q+ + F++A +RV+ KNKV LE + H +
Sbjct: 408 LRERRMQVKAEDFKSAKERVL-----KNKVEENLEGLNLQVHRN 446
Score = 51 (23.0 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 29/95 (30%), Positives = 47/95 (49%)
Query: 16 IVFLTCFTFSQISFQEFKNK-LLEPGLVDRIVVTNKSVAKVFVKSTPRSTNETNDDFTQS 74
IV T + +S F +K LLEPG +++ +K+VA V V DD
Sbjct: 123 IVSSTASSEYYVSIMSFVDKGLLEPGC--SVLLHHKTVAVVGV---------LQDD--AD 169
Query: 75 PVNGSPDKRNLSQCKYYFNIGSVESFEEKLEEAQE 109
P+ S K + S + Y +IG +ES ++++E+ E
Sbjct: 170 PMV-SVMKLDKSPTESYADIGGLESQIQEIKESVE 203
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 477 (173.0 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 108/275 (39%), Positives = 157/275 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
++ KMD + + + D+ G + QEI E V L +P+ YEE+G K PKG +L G PG
Sbjct: 169 SVMKMDKSPTES--YSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPG 226
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTLLAKA A ++ FL + GS+ ++ ++G GP R +F+ A + APSIVFIDEIDA
Sbjct: 227 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDA 286
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I E + T+ +LL ++DGF V V+ TN+ + LD AL+RPGR D
Sbjct: 287 IGTKRYDSNSGGER-EIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRID 345
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I + PD+ + +I I+ K+ L + + + L +GADI +C EA L+A
Sbjct: 346 RKILFENPDLSTKKKILGIHTSKMNLSEDVNL--ETLVTTKDDLSGADIQAMCTEAGLLA 403
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLE 450
R Q+T + F+ A +RV+ KNKV LE
Sbjct: 404 LRERRMQVTAEDFKQAKERVM-----KNKVEENLE 433
Score = 41 (19.5 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 27 ISFQEFKNK-LLEPGLVDRIVVTNKSVAKVFVKSTPRSTNETNDDFTQSPVNGSPDKRNL 85
+S F +K LLEPG +++ +K+++ V V DD P+ S K +
Sbjct: 130 VSILSFVDKELLEPGC--SVLLHHKTMSIVGV---------LQDD--ADPMV-SVMKMDK 175
Query: 86 SQCKYYFNIGSVESFEEKLEEAQE 109
S + Y +IG +ES ++++E+ E
Sbjct: 176 SPTESYSDIGGLESQIQEIKESVE 199
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 494 (179.0 bits), Expect = 6.5e-48, Sum P(2) = 6.5e-48
Identities = 103/258 (39%), Positives = 157/258 (60%)
Query: 188 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 246
KVF+ D+ G + KQ++ E + + LK P+ + +G K PKG LL GPPG KTLLAKA A
Sbjct: 618 KVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALA 677
Query: 247 GESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXX 306
ESG+ F+++ G + + +VG VR +F++ARQ +PSI+F DEID +
Sbjct: 678 TESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAISRSGEGSG 737
Query: 307 XXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 366
E ++QLL EMDG V ++ TNRPDI+DKA+LR GR DR + I PD+
Sbjct: 738 AV----ERVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYISPPDLD 793
Query: 367 GRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNE--SAQIT 424
R +IF I+LKK+ ++ +L+ LT G++GA++ ++C EA++ A + + + +I
Sbjct: 794 ARKEIFNIHLKKVPHSSDIDI--NQLSILTDGYSGAEVTSICREASIAAMKEDINAKEIN 851
Query: 425 MQHFEAAIDRVIGGLEKK 442
M HF +AI V G+ ++
Sbjct: 852 MSHFISAIGNVKKGITQE 869
Score = 357 (130.7 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 97/288 (33%), Positives = 150/288 (52%)
Query: 180 KMDMNAKDKVFFKDVAGCDEAKQEIMEFVH--FLKNPKKYEELGAKIPKGALLVGPPGTG 237
K+D N + F+ + G D ++I E + F K + G K PKG LL GPPGTG
Sbjct: 300 KIDNNKNINLNFQSIGGLDLQVKQIRELIDLSFYKLDL-LKSFGVKPPKGILLYGPPGTG 358
Query: 238 KTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIX 297
KTLLA+ A ++ +++G+D ++ F G+ ++ +F++A Q +PSI+FIDE+DA+
Sbjct: 359 KTLLARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALC 418
Query: 298 XXXXXXXXXXXNDERESTLNQLLVEMDGF------------------GTTAG--VVVLAG 337
++ + + LL MDG G G V+V+
Sbjct: 419 PKREDNS----SEVEKRIVGSLLTLMDGVVSTSDQNDGGGGDNGNGNGNCGGDKVIVIGC 474
Query: 338 TNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTP 397
TNRPD +D AL RPGRFD +I I P+ +GR+QI I+L K+ + S +A+ T
Sbjct: 475 TNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIP-NQLTSQEIAMIASKTH 533
Query: 398 GFAGADIANVCNEAALIAARNESAQITMQHFEAA-IDRVIGGLEKKNK 444
GF GADI ++C EA+L N + F++ I++ G E+K +
Sbjct: 534 GFVGADIESLCKEASL-KCFNRIKNENQKLFQSINIEKEEKGKEEKQE 580
Score = 39 (18.8 bits), Expect = 6.5e-48, Sum P(2) = 6.5e-48
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 90 YYFNIGSVESFEEKLEEAQE 109
++ +IG E ++KL+EA E
Sbjct: 620 FWGDIGGQEHIKQKLKEAIE 639
Score = 39 (18.8 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 603 REHVAQIAEELLEKEVLHQDDLVRVLGERPFK 634
+EH+ Q +E +E + + +R +G +P K
Sbjct: 627 QEHIKQKLKEAIEWPLKYPQSFIR-MGIKPPK 657
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 479 (173.7 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 104/256 (40%), Positives = 147/256 (57%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
+ D+ G + QEI E V L +P+ YE++G K PKG +L GPPGTGKTLLAKA A E+
Sbjct: 192 YADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANET 251
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
FL + GS+ ++ ++G GP VR +F+ A + APSIVFIDEIDA+
Sbjct: 252 SATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGER 311
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF + V V+ TNR D LD AL+RPGR DR+I + PD K +
Sbjct: 312 -EIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKR 370
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
+IFQI+ K+ + P + +GADI +C EA L+A R +IT
Sbjct: 371 RIFQIHTSKMTMS--PDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLR 428
Query: 430 AAIDRVIGGLEKKNKV 445
A D+ + +KK +
Sbjct: 429 KARDKAL--FQKKGNI 442
Score = 38 (18.4 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 91 YFNIGSVESFEEKLEEAQE 109
Y +IG +ES ++++EA E
Sbjct: 192 YADIGGLESQIQEIKEAVE 210
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 479 (173.7 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 104/256 (40%), Positives = 147/256 (57%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
+ D+ G + QEI E V L +P+ YE++G K PKG +L GPPGTGKTLLAKA A E+
Sbjct: 192 YADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANET 251
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
FL + GS+ ++ ++G GP VR +F+ A + APSIVFIDEIDA+
Sbjct: 252 SATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGER 311
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF + V V+ TNR D LD AL+RPGR DR+I + PD K +
Sbjct: 312 -EIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKR 370
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
+IFQI+ K+ + P + +GADI +C EA L+A R +IT
Sbjct: 371 RIFQIHTSKMTMS--PDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLR 428
Query: 430 AAIDRVIGGLEKKNKV 445
A D+ + +KK +
Sbjct: 429 KARDKAL--FQKKGNI 442
Score = 38 (18.4 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 91 YFNIGSVESFEEKLEEAQE 109
Y +IG +ES ++++EA E
Sbjct: 192 YADIGGLESQIQEIKEAVE 210
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 108/267 (40%), Positives = 151/267 (56%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
A++T M + K + +KDV GC E +++ E V L +P+K+ LG PKG L+ GPP
Sbjct: 154 ASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPP 213
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
GTGKTL A+A A + F+ + GS+ ++ +VG G VR LFQ AR I+F DE+D
Sbjct: 214 GTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVD 273
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI N E + T+ +L+ ++DGF + VL TNRPD LD ALLRPGR
Sbjct: 274 AIGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRL 332
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR++ PD++GR IF I+ K + + F + LA L P GADI +VC EA +
Sbjct: 333 DRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRF--ELLARLCPNSTGADIRSVCTEAGMF 390
Query: 415 AARNESAQITMQHFEAAIDRVIGGLEK 441
A R ++ + F AID+VI K
Sbjct: 391 AIRARRKVVSEKDFLEAIDKVIKSYAK 417
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 106/266 (39%), Positives = 154/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
++T M + K V + DV GC E +++ E V + +P+K+ +LG PKG L GPPG
Sbjct: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTLLA+A A + F+ + GS+ ++ +VG G VR LFQ AR IVF DE+DA
Sbjct: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +++ ++DGF + VL TNRPD LD ALLRPGR D
Sbjct: 273 IGGARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLD 331
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R++ PD++ R QIF+I+ + + + + F + LA L P GADI +VC EA + A
Sbjct: 332 RKVEFGLPDLESRTQIFKIHTRTMNCERDIRF--ELLARLCPNSTGADIRSVCTEAGMYA 389
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R +T + F A+++VI G +K
Sbjct: 390 IRARRKTVTEKDFLDAVNKVIKGYQK 415
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 107/260 (41%), Positives = 154/260 (59%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ V G D +EI E + +K+P+ ++ LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 233
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 234 ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGG-D 292
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I PD K R
Sbjct: 293 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARA 352
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
QI +I+ +K+ L ++A PG +GA++ +VC EA + A R +T + FE
Sbjct: 353 QILKIHSRKMNLMR--GIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFE 410
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 411 MAVGKVMQKDSEKNMSIKKL 430
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 471 (170.9 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 101/275 (36%), Positives = 155/275 (56%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
++T M + K V + DV GC E +++ E V L +P+++ LG PKGALL GPPG
Sbjct: 170 SVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPG 229
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR I+F DEIDA
Sbjct: 230 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDA 289
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
+ N E + T+ +L+ ++DGF + V+ TNRP LD AL+RPGR D
Sbjct: 290 VGGARFDDGAGGDN-EVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRID 348
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR I +I+ K + ++ + + + ++ L P GA++ +V EA + A
Sbjct: 349 RKIEFSLPDVEGRANILRIHAKSMSVERDIRW--ELISRLCPNATGAELRSVATEAGMFA 406
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLE 450
R T + F AA+D+VI G K N + ++
Sbjct: 407 IRARRKVATEKDFLAAVDKVIKGNLKFNSTATYMQ 441
Score = 37 (18.1 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 81 DKRNLSQCKYYFNIGSVESFEEKLEE 106
D+++ + KY N+ + F L E
Sbjct: 108 DEKDSDKSKYVINVKQIAKFVVNLGE 133
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 106/260 (40%), Positives = 154/260 (59%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ V G D+ +EI E + +K+P+ ++ LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHT 217
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 218 ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGG-D 276
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I PD K R
Sbjct: 277 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARA 336
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L ++A PG +GA++ +VC EA + A R +T + FE
Sbjct: 337 DILKIHSRKMNLMR--GINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFE 394
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 395 MAVGKVMQKDSEKNMSIKKL 414
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 105/260 (40%), Positives = 156/260 (60%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 154 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 213
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 214 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-D 272
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I P+ + R
Sbjct: 273 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 332
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L + +++A L PG +GA++ VC EA + A R +T + FE
Sbjct: 333 DILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 390
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 391 MAVAKVMQKDSEKNMSIKKL 410
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 105/260 (40%), Positives = 156/260 (60%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-D 266
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I P+ + R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L + +++A L PG +GA++ VC EA + A R +T + FE
Sbjct: 327 DILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 385 MAVAKVMQKDSEKNMSIKKL 404
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 105/260 (40%), Positives = 156/260 (60%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-D 266
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I P+ + R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L + +++A L PG +GA++ VC EA + A R +T + FE
Sbjct: 327 DILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 385 MAVAKVMQKDSEKNMSIKKL 404
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 105/260 (40%), Positives = 156/260 (60%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-D 266
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I P+ + R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L + +++A L PG +GA++ VC EA + A R +T + FE
Sbjct: 327 DILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 385 MAVAKVMQKDSEKNMSIKKL 404
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 105/260 (40%), Positives = 156/260 (60%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-D 266
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I P+ + R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L + +++A L PG +GA++ VC EA + A R +T + FE
Sbjct: 327 DILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 385 MAVAKVMQKDSEKNMSIKKL 404
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 105/260 (40%), Positives = 156/260 (60%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 156 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 215
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 216 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-D 274
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I P+ + R
Sbjct: 275 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 334
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L + +++A L PG +GA++ VC EA + A R +T + FE
Sbjct: 335 DILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 392
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 393 MAVAKVMQKDSEKNMSIKKL 412
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 105/260 (40%), Positives = 156/260 (60%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 156 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 215
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 216 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-D 274
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I P+ + R
Sbjct: 275 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 334
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L + +++A L PG +GA++ VC EA + A R +T + FE
Sbjct: 335 DILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 392
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 393 MAVAKVMQKDSEKNMSIKKL 412
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 105/260 (40%), Positives = 156/260 (60%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-D 266
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I P+ + R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L + +++A L PG +GA++ VC EA + A R +T + FE
Sbjct: 327 DILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 385 MAVAKVMQKDSEKNMSIKKL 404
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 105/260 (40%), Positives = 156/260 (60%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-D 266
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I P+ + R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L + +++A L PG +GA++ VC EA + A R +T + FE
Sbjct: 327 DILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 385 MAVAKVMQKDSEKNMSIKKL 404
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 105/260 (40%), Positives = 156/260 (60%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG-D 266
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I P+ + R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L + +++A L PG +GA++ VC EA + A R +T + FE
Sbjct: 327 DILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 385 MAVAKVMQKDSEKNMSIKKL 404
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 105/260 (40%), Positives = 156/260 (60%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ + G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 143 YEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 202
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 203 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGG--D 260
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I P+ + R
Sbjct: 261 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 320
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L + +++A L PG +GA++ VC EA + A R +T + FE
Sbjct: 321 DILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 378
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 379 MAVAKVMQKDSEKNMSIKKL 398
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 105/260 (40%), Positives = 156/260 (60%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ V G D+ +EI E + +K+P+ ++ LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 147 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 206
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 207 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGG-D 265
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I P+ + R
Sbjct: 266 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARL 325
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L + +++A L PG +GA++ VC EA + A R +T + FE
Sbjct: 326 DILKIHSRKMNLTRGINL--RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 383
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN I KL
Sbjct: 384 MAVAKVMQKDSEKNMSIKKL 403
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 280 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 397 IRARRKVATEKDFLEAVNKVIKSYAK 422
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 151 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 210
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 211 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 270
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 271 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 329
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 330 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 387
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 388 IRARRKIATEKDFLEAVNKVIKSYAK 413
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 159 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 218
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 219 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 278
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 279 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 337
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 338 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 395
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 396 IRARRKIATEKDFLEAVNKVIKSYAK 421
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 280 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAK 422
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 280 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAK 422
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 23 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 82
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 83 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 142
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 143 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 201
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 202 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 259
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 260 IRARRKIATEKDFLEAVNKVIKSYAK 285
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 280 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAK 422
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 202 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 261
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 262 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 321
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 322 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 380
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 381 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 438
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 439 IRARRKIATEKDFLEAVNKVIKSYAK 464
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 161 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 220
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 221 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 280
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 281 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 339
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 340 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 397
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 398 IRARRKIATEKDFLEAVNKVIKSYAK 423
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 280 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAK 422
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 280 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAK 422
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 220 TGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 280 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAK 422
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 220 TGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 280 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAK 422
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 280 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAK 422
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 105/260 (40%), Positives = 152/260 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+T M + + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPGT
Sbjct: 170 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 229
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSIVFIDEIDAI
Sbjct: 230 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 289
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 290 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 348
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IFQI+ ++ L ++ + L +GADI +C EA L+A
Sbjct: 349 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DELIMAKDDLSGADIKAICTEAGLMAL 406
Query: 417 RNESAQITMQHFEAAIDRVI 436
R ++T + F+ + + V+
Sbjct: 407 RERRMKVTNEDFKKSKENVL 426
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 105/260 (40%), Positives = 152/260 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+T M + + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPGT
Sbjct: 169 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 228
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSIVFIDEIDAI
Sbjct: 229 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 288
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 289 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 347
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IFQI+ ++ L ++ + L +GADI +C EA L+A
Sbjct: 348 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DELIMAKDDLSGADIKAICTEAGLMAL 405
Query: 417 RNESAQITMQHFEAAIDRVI 436
R ++T + F+ + + V+
Sbjct: 406 RERRMKVTNEDFKKSKENVL 425
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 457 (165.9 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 96/259 (37%), Positives = 154/259 (59%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ M+++ K + D+ G ++ QE++E + + + +++E+LG + PKG LL GPPGT
Sbjct: 157 VKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGT 216
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTL+A+A A ++ FL ++G ++MF+G G VR FQ A++ AP I+FIDEIDAI
Sbjct: 217 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAI 276
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + + V+A TNR DILD AL+R GR DR
Sbjct: 277 GTKRFDSEVSGDR-EVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDR 335
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P + R +I QI+ +K+ + + +F + LA T F GA + VC EA ++A
Sbjct: 336 KIEFPHPTEEARARILQIHSRKMNVHPDVNF--EELARSTDDFNGAQLKAVCVEAGMLAL 393
Query: 417 RNESAQITMQHFEAAIDRV 435
R ++ ++ + F I +V
Sbjct: 394 RRDATEVNHEDFNEGIIQV 412
Score = 38 (18.4 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 98 ESFEEKLEEAQEALGID 114
+S++EK++E QE + ++
Sbjct: 51 DSYKEKIKENQEKIKLN 67
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 103/259 (39%), Positives = 155/259 (59%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ V G D+ QEI E + +K+P+ ++ LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 142 YEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHT 201
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ F+G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 202 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTG--D 259
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR D+LD+ALLRPGR DR+I P+ + R
Sbjct: 260 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARL 319
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
I +I+ +K+ L + +++A PG +GA++ VC EA + A R +T + FE
Sbjct: 320 DILKIHSRKMNLTRGINL--RKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 377
Query: 430 AAIDRVIGGLEKKNKVISK 448
A+ +V+ +KN I K
Sbjct: 378 MAVSKVMMKDSEKNMSIRK 396
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 105/260 (40%), Positives = 152/260 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+T M + + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSIVFIDEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IFQI+ ++ L ++ + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 417 RNESAQITMQHFEAAIDRVI 436
R ++T + F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 105/260 (40%), Positives = 152/260 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+T M + + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSIVFIDEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IFQI+ ++ L ++ + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 417 RNESAQITMQHFEAAIDRVI 436
R ++T + F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 105/260 (40%), Positives = 152/260 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+T M + + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPGT
Sbjct: 98 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 157
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSIVFIDEIDAI
Sbjct: 158 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 217
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 218 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 276
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IFQI+ ++ L ++ + L +GADI +C EA L+A
Sbjct: 277 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 334
Query: 417 RNESAQITMQHFEAAIDRVI 436
R ++T + F+ + + V+
Sbjct: 335 RERRMKVTNEDFKKSKENVL 354
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 105/260 (40%), Positives = 152/260 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+T M + + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSIVFIDEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IFQI+ ++ L ++ + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 417 RNESAQITMQHFEAAIDRVI 436
R ++T + F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 105/260 (40%), Positives = 152/260 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+T M + + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSIVFIDEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IFQI+ ++ L ++ + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 417 RNESAQITMQHFEAAIDRVI 436
R ++T + F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 105/260 (40%), Positives = 152/260 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+T M + + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSIVFIDEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IFQI+ ++ L ++ + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 417 RNESAQITMQHFEAAIDRVI 436
R ++T + F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 105/260 (40%), Positives = 152/260 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+T M + + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSIVFIDEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IFQI+ ++ L ++ + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 417 RNESAQITMQHFEAAIDRVI 436
R ++T + F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 103/266 (38%), Positives = 151/266 (56%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+++ LG + PKG LL GPPG
Sbjct: 160 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 279
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 280 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR I +I+ + + ++ + F + LA L P GA+I +VC EA + A
Sbjct: 339 RKIEFSLPDLEGRTHILKIHARSMSVERDIRF--ELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+++VI K
Sbjct: 397 IRARRKIATEKDFLEAVNKVIKSYAK 422
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 101/266 (37%), Positives = 151/266 (56%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
++T M + K + + D+ GC E +++ E V L P+++ LG PKG LL GPPG
Sbjct: 147 SVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPG 206
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LFQ A+ I+FIDE+DA
Sbjct: 207 TGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDA 266
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I + E + T+ +++ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 267 IGGSRGDESAHGDH-EVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRID 325
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + + F + LA L P G+DI +VC EA + A
Sbjct: 326 RRIEFSLPDLEGRTHIFKIHANTMNMSRDVRF--ELLARLCPNSTGSDIRSVCTEAGMFA 383
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R IT + AI++VI G ++
Sbjct: 384 IRARRKTITEKDLLLAINKVIHGCKQ 409
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 101/266 (37%), Positives = 151/266 (56%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
++T M + K + + D+ GC E +++ E V L P+++ LG PKG LL GPPG
Sbjct: 147 SVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPG 206
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LFQ A+ I+FIDE+DA
Sbjct: 207 TGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDA 266
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I + E + T+ +++ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 267 IGGSRGDESAHGDH-EVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRID 325
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I PD++GR IF+I+ + + + F + LA L P G+DI +VC EA + A
Sbjct: 326 RRIEFSLPDLEGRTHIFKIHANTMNMSRDVRF--ELLARLCPNSTGSDIRSVCTEAGMFA 383
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R IT + AI++VI G ++
Sbjct: 384 IRARRKTITEKDLLLAINKVIHGCKQ 409
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 102/266 (38%), Positives = 151/266 (56%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC + +++ E V L +P++Y LG + PKG LL GPPG
Sbjct: 162 TVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPG 221
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 281
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
+ N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 282 VGGARFDDGQGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 340
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R++ PD+ GR I +I+ K++ ++ + + LA L P GA+I +VC EA + A
Sbjct: 341 RKVEFALPDLAGRAHILKIHAKQMSVERDIRY--DLLARLCPNSTGAEIRSVCTEAGMFA 398
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F AI++V+ G K
Sbjct: 399 IRARRKVATEKDFLEAINKVVKGYAK 424
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 102/266 (38%), Positives = 151/266 (56%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC + +++ E V L +P++Y LG + PKG LL GPPG
Sbjct: 162 TVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPG 221
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 222 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDA 281
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
+ N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 282 VGGARFDDGQGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 340
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R++ PD+ GR I +I+ K++ ++ + + LA L P GA+I +VC EA + A
Sbjct: 341 RKVEFALPDLAGRAHILKIHAKQMSVERDIRY--DLLARLCPNSTGAEIRSVCTEAGMFA 398
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F AI++V+ G K
Sbjct: 399 IRARRKVATEKDFLEAINKVVKGYAK 424
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 104/266 (39%), Positives = 148/266 (55%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
T+T M + K V + DV GC E +++ E V L +P+K+ LG + PKG LL GPPG
Sbjct: 160 TVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPG 219
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR ++F DEIDA
Sbjct: 220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDA 279
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRPD LD AL+RPGR D
Sbjct: 280 IGGARFDDGAGGDN-EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R++ PD GR IF+I+ + + ++ + F LA L P GA+I +VC EA + A
Sbjct: 339 RKVEFGLPDQDGRSHIFKIHARSMSVERDIRF--DLLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+ +VI K
Sbjct: 397 IRARRKVATEKDFLEAVKKVIKSYAK 422
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 100/266 (37%), Positives = 151/266 (56%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
++T M + K V + DV GC + +++ E V L +P+++ LG PKG LL GPPG
Sbjct: 194 SVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPG 253
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR I+F DEIDA
Sbjct: 254 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDA 313
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
+ N E + T+ +L+ ++DGF + V+ TNRP+ LD ALLRPGR D
Sbjct: 314 VGGARFDDGAGGDN-EVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRID 372
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R++ PD++GR IF+I+ K + + E + ++ L P GA++ +VC EA + A
Sbjct: 373 RKVEFSLPDLEGRANIFRIHSKSMSV--ERGIRWELISRLCPNSTGAELRSVCTEAGMFA 430
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+D+VI G +K
Sbjct: 431 IRARRKVATEKDFLKAVDKVISGYKK 456
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 104/260 (40%), Positives = 152/260 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
++ M + + + DV G D+ QEI E V L +P+ YEE+G + PKG +L G PGT
Sbjct: 174 VSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGT 233
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSIVFIDEIDA+
Sbjct: 234 GKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAV 293
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V VL TNR + LD AL+RPGR DR
Sbjct: 294 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDR 352
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IFQI+ ++ L E + + +GADI +C EA L+A
Sbjct: 353 KIEFPLPDEKTKRRIFQIHTSRMTLGKEVNL--EEFITAKDELSGADIKAMCTEAGLLAL 410
Query: 417 RNESAQITMQHFEAAIDRVI 436
R ++TM+ F+ + + V+
Sbjct: 411 RERRMRVTMEDFQKSKENVL 430
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 99/247 (40%), Positives = 146/247 (59%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
+ D+ G + QE+ E + L +P+ YEE+G K PKG +L G PGTGKTLLAKA A ++
Sbjct: 183 YSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQT 242
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
FL + GS+ ++ ++G GP VR LF+ A +CAPSIVFIDEIDA+
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGER 302
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF V V+ TNR + LD AL+RPGR DR+I PDIK +
Sbjct: 303 -EIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKR 361
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
+IF+I+ K+ L + + + +GADI +C E+ L+A R ++T F+
Sbjct: 362 KIFEIHTAKMNLSEDVNL--EEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFK 419
Query: 430 AAIDRVI 436
A ++V+
Sbjct: 420 KAKEKVL 426
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 106/256 (41%), Positives = 149/256 (58%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
+ D+ G + QEI E V L +P+ YE++G K PKG +L G PGTGKTLLAKA A +
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANST 246
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
FL + GS+ ++ ++G GP VR LF+ A +PSIVFIDEIDA+
Sbjct: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGER 306
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF + V V+ TNR + LD ALLRPGR DR+I PDIK R
Sbjct: 307 -EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR 365
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
+IFQI+ K+ L + + + F+GADI +C EA L+A R ++T F+
Sbjct: 366 RIFQIHTSKMTLSEDVNL--EEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFK 423
Query: 430 AAIDRVIGGLEKKNKV 445
A ++V+ +KK V
Sbjct: 424 KAKEKVM--FKKKEGV 437
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 452 (164.2 bits), Expect = 6.2e-45, Sum P(2) = 6.2e-45
Identities = 95/244 (38%), Positives = 145/244 (59%)
Query: 194 VAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 252
V G D+ +EI E + +K+P+ +E LG PKG +L GPPGTGKTLLA+A A +
Sbjct: 146 VGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECK 205
Query: 253 FLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDER 312
F+ +SGS+ ++ ++G G VR LF AR+ APSI+F+DEID+I + E
Sbjct: 206 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGG-DSEV 264
Query: 313 ESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 372
+ T+ +LL ++DGF ++ + ++ TNR DILD ALLRPGR DR+I P + R I
Sbjct: 265 QRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAARTDIL 324
Query: 373 QIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAI 432
+I+ + + L + +++A G +GAD+ VC EA + A R +T + FE A+
Sbjct: 325 KIHSRSMNLTRGINL--RKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAV 382
Query: 433 DRVI 436
+V+
Sbjct: 383 AKVM 386
Score = 39 (18.8 bits), Expect = 6.2e-45, Sum P(2) = 6.2e-45
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 599 IEEHREHVAQIAEELLEKEVLHQDDLVRVLGERPFK 634
+ E R HV Q EL +V+ ++D V ++ FK
Sbjct: 366 LRERRIHVTQEDFELAVAKVMSKNDDGAVSLQKLFK 401
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 103/253 (40%), Positives = 147/253 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+T M + + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPGT
Sbjct: 171 VTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + PSIVFIDEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAI 290
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IFQI+ ++ L ++ + L +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKKRIFQIHTSRMTLADDVTL--DELIMAKDDLSGADIKAICTEAGLMAL 407
Query: 417 RNESAQITMQHFE 429
R ++T + F+
Sbjct: 408 RERRMKVTNEDFK 420
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 104/260 (40%), Positives = 153/260 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+T M + + + D+ G D QEI E V L +P+ YEE+G K PKG +L GPPGT
Sbjct: 170 VTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 229
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSIVFIDEIDA+
Sbjct: 230 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAV 289
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 290 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 348
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IF I+ ++ L + + S+ + A +GADI +C EA L+A
Sbjct: 349 KIEFPLPDEKTKRRIFTIHTSRMTLAEDVNL-SELIMA-KDDLSGADIKAICTEAGLMAL 406
Query: 417 RNESAQITMQHFEAAIDRVI 436
R ++T + F+ + + V+
Sbjct: 407 RERRMKVTNEDFKKSKESVL 426
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 102/257 (39%), Positives = 153/257 (59%)
Query: 194 VAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 252
V G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 147 VGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 206
Query: 253 FLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDER 312
F+ +SGS+ ++ ++G G VR LF AR+ APSI+F+DEID+I + E
Sbjct: 207 FIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEV 266
Query: 313 ESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 372
+ T+ +LL ++DGF +T + VL TNR DILD ALLRPGR DR+I P GR I
Sbjct: 267 QRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDIL 326
Query: 373 QIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAI 432
+I+ +K+ L + ++++ G +GA++ VC EA + A R ++ + FE A+
Sbjct: 327 KIHSRKMNLTRGINL--KKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAV 384
Query: 433 DRVIGGLEKKNKVISKL 449
+V+ ++N I+KL
Sbjct: 385 SKVMKKDSEQNMSINKL 401
>UNIPROTKB|H3BTY6 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR000642 Pfam:PF01434 GO:GO:0005524
GO:GO:0006508 GO:GO:0004222 EMBL:AC092123 HGNC:HGNC:11237
ChiTaRS:SPG7 Ensembl:ENST00000561911 Bgee:H3BTY6 Uniprot:H3BTY6
Length = 210
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 88/159 (55%), Positives = 118/159 (74%)
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
+IF+ +LK LKL +FYSQRLA LTPGF+GADIAN+CNEAAL AAR + +FE
Sbjct: 2 EIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFE 61
Query: 430 AAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGF 489
A++RV+ G KK+K++SK E++ VA+HESGHA+ GW LEH E ++KV+I PR AALGF
Sbjct: 62 YAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGF 121
Query: 490 AQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLLGKIST 528
AQ +P + L TKEQLF+ CM LGGRA+E + ++++
Sbjct: 122 AQMLPRDQHLFTKEQLFERMCMALGGRASEALSFNEVTS 160
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 99/266 (37%), Positives = 152/266 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
++T M + K V + DV GC E + + E V L +P+++ +LG PKG +L GPPG
Sbjct: 164 SVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPG 223
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR I+F DEIDA
Sbjct: 224 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDA 283
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + VL TNRP+ LD+AL+RPGR D
Sbjct: 284 IGGARFDDGAGGDN-EVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRID 342
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R++ PD++GR I +I+ K + +D + + + +A L P GA++ +VC EA + A
Sbjct: 343 RKVEFGLPDLEGRAHILRIHAKSMAIDKDIRW--ELIARLCPSQTGAELRSVCTEAGMFA 400
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEK 441
R T + F A+ +V+ G +K
Sbjct: 401 IRARRRVATEKDFLDAVQKVVKGNQK 426
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 106/256 (41%), Positives = 149/256 (58%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
+ D+ G + QEI E V L +P+ YE++G K PKG +L G PGTGKTLLAKA A +
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANST 246
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
FL + GS+ ++ ++G GP VR LF+ A +PSIVFIDEIDA+
Sbjct: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGER 306
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF + V V+ TNR + LD ALLRPGR DR+I PDIK R
Sbjct: 307 -EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR 365
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
+IFQI+ K+ L + + + F+GADI +C EA L+A R ++T F+
Sbjct: 366 RIFQIHTSKMTLAEDVNL--EEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFK 423
Query: 430 AAIDRVIGGLEKKNKV 445
A ++V+ +KK V
Sbjct: 424 KAKEKVM--FKKKEGV 437
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 101/257 (39%), Positives = 152/257 (59%)
Query: 194 VAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 252
+ G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
Query: 253 FLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDER 312
F+ +SGS+ ++ ++G G VR LF AR+ APSI+F+DEID+I + E
Sbjct: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
Query: 313 ESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 372
+ T+ +LL ++DGF + + VL TNR DILD+ALLRPGR DR+I P+ + R I
Sbjct: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDIL 342
Query: 373 QIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAI 432
+I+ +K+ L +++A G +GA++ VC EA + A R +T + FE A+
Sbjct: 343 KIHSRKMNLMRGIDL--KKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAV 400
Query: 433 DRVIGGLEKKNKVISKL 449
+V+ +KN + KL
Sbjct: 401 AKVMKKDTEKNMSLRKL 417
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 101/257 (39%), Positives = 152/257 (59%)
Query: 194 VAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 252
+ G D+ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
Query: 253 FLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDER 312
F+ +SGS+ ++ ++G G VR LF AR+ APSI+F+DEID+I + E
Sbjct: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
Query: 313 ESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 372
+ T+ +LL ++DGF + + VL TNR DILD+ALLRPGR DR+I P+ + R I
Sbjct: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDIL 342
Query: 373 QIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAI 432
+I+ +K+ L +++A G +GA++ VC EA + A R +T + FE A+
Sbjct: 343 KIHSRKMNLMRGIDL--KKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAV 400
Query: 433 DRVIGGLEKKNKVISKL 449
+V+ +KN + KL
Sbjct: 401 AKVMKKDTEKNMSLRKL 417
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 98/263 (37%), Positives = 151/263 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
++T M + K V + DV GC E +++ E V L +P+++ +LG PKG LL GPPG
Sbjct: 171 SVTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPG 230
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTL A+A A + F+ + GS+ ++ +VG G VR LF+ AR I+F DE+DA
Sbjct: 231 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDA 290
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I N E + T+ +L+ ++DGF + V+ TNRP+ LD ALLRPGR D
Sbjct: 291 IGGARFDDGAGGDN-EVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRID 349
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R++ PD++GR IF+I+ K + ++ + + + ++ L P GA++ +VC EA + A
Sbjct: 350 RKVEFSLPDLEGRANIFRIHSKTMSVEKDIRW--ELISRLCPNATGAELRSVCTEAGMFA 407
Query: 416 ARNESAQITMQHFEAAIDRVIGG 438
R + F A+D+VI G
Sbjct: 408 IRARRKVANEKDFLKAVDKVIKG 430
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 105/260 (40%), Positives = 151/260 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+T M + + + D+ G D QEI E V L +P+ YEE+G K PKG +L G PGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGT 230
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSIVFIDEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IFQI+ ++ + + S LA +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDLILAK--DDLSGADIKAICTEAGLMAL 407
Query: 417 RNESAQITMQHFEAAIDRVI 436
R ++T + F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 447 (162.4 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 94/259 (36%), Positives = 154/259 (59%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ M+++ K + D+ G ++ QE++E + + + +++E+LG + PKG LL GPPGT
Sbjct: 156 VKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGT 215
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTL+A+A A ++ FL ++G ++MF+G G VR F A++ +P I+FIDEIDAI
Sbjct: 216 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAI 275
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + + V+A TNR DILD AL+R GR DR
Sbjct: 276 GTKRFDSEVSGDR-EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDR 334
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P + R +I QI+ +K+ ++ + +F + LA T F GA + VC EA ++A
Sbjct: 335 KIEFPHPTEEARGRILQIHSRKMNVNADVNF--EELARSTDDFNGAQLKAVCVEAGMLAL 392
Query: 417 RNESAQITMQHFEAAIDRV 435
R ++ ++ + F I +V
Sbjct: 393 RRDATEVNHEDFNEGIIQV 411
Score = 41 (19.5 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 67 TNDDFTQSPVNGSPDKRNLSQCKYYFNIGSVESFEEKLEEAQEALGIDPHDYIPVTYENE 126
T DD ++ + + R L + N+ +ES +EK++E QE + ++ +P N
Sbjct: 20 TTDDIGRASRLLANEIRILKEESQRTNL-DLESVKEKIKENQEKIKLNKQ--LPYLVGNI 76
Query: 127 VNWYQELMRFAP 138
V E++ +P
Sbjct: 77 V----EILEMSP 84
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 104/260 (40%), Positives = 152/260 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+T M + + + D+ G D QEI E V L +P+ YEE+G K PKG +L G PGT
Sbjct: 171 VTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGT 230
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF+ A + APSIVFIDEIDAI
Sbjct: 231 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAI 290
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+ TNR + LD AL+RPGR DR
Sbjct: 291 GTKRYDSNSGGER-EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDR 349
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I PD K + +IFQI+ ++ + ++ + LA +GADI +C EA L+A
Sbjct: 350 KIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAK--DDLSGADIKAICTEAGLMAL 407
Query: 417 RNESAQITMQHFEAAIDRVI 436
R ++T + F+ + + V+
Sbjct: 408 RERRMKVTNEDFKKSKENVL 427
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 98/257 (38%), Positives = 149/257 (57%)
Query: 194 VAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 252
+ G D+ +EI E + LK+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 134 IGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCR 193
Query: 253 FLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDER 312
F+ +SGS+ ++ ++G G VR LF AR+ APSI+F+DEID+I + E
Sbjct: 194 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGSG-DSEV 252
Query: 313 ESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 372
+ T+ +LL ++DGF T + ++ TNR DILD ALLRPGR DR+I P ++ R I
Sbjct: 253 QRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARADIL 312
Query: 373 QIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAI 432
+I+ + + L + ++A G +GA++ VC EA + A R +T + F+ A
Sbjct: 313 RIHSRSMNLTRGINL--TKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDFDLAT 370
Query: 433 DRVIGGLEKKNKVISKL 449
+++ + K +SKL
Sbjct: 371 AKILNKHDDKEVAVSKL 387
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 106/259 (40%), Positives = 150/259 (57%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ M+++ K + D+ G D+ +E++E V +K K++ LG K PKGAL+ GPPGT
Sbjct: 186 VKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPPGT 245
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A +SG FL ++ ++MF+G G VR F A++ AP+I+FIDE+DAI
Sbjct: 246 GKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAI 305
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGFG+ V VLA TNR D LD ALLR GR DR
Sbjct: 306 GTKRFDSDKSGDR-EVQRTMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLDR 364
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P + R+ + +I+ +KL DN S + LA T F GA + V EA +IA
Sbjct: 365 KIEFPLPSEEARESVLKIHARKLHCDNN-SVNWRELARSTDEFNGAQLKAVTVEAGMIAL 423
Query: 417 RNESAQITMQHFEAAIDRV 435
RN + I + F AI V
Sbjct: 424 RNGKSIIKHEDFVEAISEV 442
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 99/260 (38%), Positives = 149/260 (57%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ V G ++ +EI E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 144 YEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHT 203
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ ++G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 204 DCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGD 263
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF T + V+ TNR DILD ALLRPGR DR+I P + R
Sbjct: 264 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARA 323
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
+I +I+ + + L S +A G +GA++ VC EA + A R +T + FE
Sbjct: 324 EILRIHSRSMNLTRGIDLKS--IAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFE 381
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ + + KL
Sbjct: 382 LAVAKVLNKGDSGEMSLQKL 401
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 100/260 (38%), Positives = 155/260 (59%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ V G D+ +E+ E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 178 YEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHT 237
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ ++G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 238 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHG--D 295
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF +T + V+ TNR DILD+ALLRPGR DR+I P+++ R
Sbjct: 296 SEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARM 355
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
+I +I+ +K+ L ++A +GA++ VC EA + A R +T + FE
Sbjct: 356 EILKIHSRKMNLMRGIDML--KIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFE 413
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN + KL
Sbjct: 414 MAVAKVMKQDAEKNFTLRKL 433
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 102/271 (37%), Positives = 158/271 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ M++ K + D+ G D+ ++++E + + + +K+E++G K PKG L+ GPPGT
Sbjct: 172 VKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGT 231
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ AP+I+FIDE+DAI
Sbjct: 232 GKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAI 291
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF T V V+A TNRPD LD ALLR GR DR
Sbjct: 292 GTKRFDSELSGDR-EVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDR 350
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I + P+ + R +I QI+ +K+ + + +F + LA T F GA + VC EA +IA
Sbjct: 351 KIELPHPNEESRARILQIHSRKMNVHKDVNF--EELARSTDDFNGAQLKAVCVEAGMIAL 408
Query: 417 RNESAQITMQHFEAAIDRVIGGLEKKNKVIS 447
R + +I + F I V L KK ++
Sbjct: 409 RRGATEIDHEDFVEGITSV---LSKKKSTLN 436
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 100/260 (38%), Positives = 155/260 (59%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
++ V G D+ +E+ E + +K+P+ +E LG PKG LL GPPGTGKTLLA+A A +
Sbjct: 178 YEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHT 237
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
F+ +SGS+ ++ ++G G VR LF AR+ APSI+F+DEID+I +
Sbjct: 238 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHG--D 295
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
E + T+ +LL ++DGF +T + V+ TNR DILD+ALLRPGR DR+I P+++ R
Sbjct: 296 SEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARM 355
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFE 429
+I +I+ +K+ L ++A +GA++ VC EA + A R +T + FE
Sbjct: 356 EILKIHSRKMNLMRGIDML--KIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFE 413
Query: 430 AAIDRVIGGLEKKNKVISKL 449
A+ +V+ +KN + KL
Sbjct: 414 MAVAKVMKQDAEKNFTLRKL 433
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 102/271 (37%), Positives = 158/271 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ M++ K + D+ G D+ ++++E + + + +K+E++G K PKG L+ GPPGT
Sbjct: 172 VKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGT 231
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ AP+I+FIDE+DAI
Sbjct: 232 GKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAI 291
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF T V V+A TNRPD LD ALLR GR DR
Sbjct: 292 GTKRFDSELSGDR-EVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDR 350
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I + P+ + R +I QI+ +K+ + + +F + LA T F GA + VC EA +IA
Sbjct: 351 KIELPHPNEESRARILQIHSRKMNVHKDVNF--EELARSTDDFNGAQLKAVCVEAGMIAL 408
Query: 417 RNESAQITMQHFEAAIDRVIGGLEKKNKVIS 447
R + +I + F I V L KK ++
Sbjct: 409 RRGATEIDHEDFVEGITSV---LSKKKSTLN 436
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 100/259 (38%), Positives = 156/259 (60%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ M+++ K + D+ G D+ +EI+E + + +K +++++LG K PKGAL+ GPPGT
Sbjct: 197 VKAMEVDEKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGT 256
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A E+ FL ++G ++MF+G G VR F A++ APSI+FIDE+DA+
Sbjct: 257 GKTLLARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAV 316
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + + VLA TNR D+LD ALLR GR DR
Sbjct: 317 GTKRFDSEKSGDR-EVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDR 375
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R I QI+ +K+ +++ ++ LA T F GA + VC EA +IA
Sbjct: 376 KIEFPLPNEEARANILQIHSRKMTVEDSVNW--AELARSTDEFGGAQLKAVCVEAGMIAL 433
Query: 417 RNESAQITMQHFEAAIDRV 435
R ++I +++ AI V
Sbjct: 434 RKGHSKIGHENYVDAIAEV 452
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 103/256 (40%), Positives = 145/256 (56%)
Query: 188 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 246
K F D+ GC+ QE+ E V L +P+ YEE+G PKG +L G PGTGKTLLAKA A
Sbjct: 179 KETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVA 238
Query: 247 GESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXX 306
+ F+ +GSD ++ G G VR +FQ A++ APSIVFIDEIDA+
Sbjct: 239 NSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSR 298
Query: 307 XXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 366
E + TL +LL ++DGF + V ++ TNR D LD AL+RPGR DR+I + KPD K
Sbjct: 299 G-EQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPKPDEK 357
Query: 367 GRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQ 426
R +IF I+ + + ++ + + +GA+I VC EA ++A R + +
Sbjct: 358 TRQKIFTIHTSGMTIQKAVTY--ENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTD 415
Query: 427 HFEAAIDRVIGGLEKK 442
FE A+ V+ L KK
Sbjct: 416 DFEKAVKSVM--LSKK 429
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 477 (173.0 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 101/251 (40%), Positives = 154/251 (61%)
Query: 188 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 246
KV ++DV G +E K ++ME V + K+ ++ +G + P G L+ GPPG KTL+A+A A
Sbjct: 720 KVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVA 779
Query: 247 GESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXX 306
E+ + FL++ G + +VG VRSLF +AR APSI+F DEID++
Sbjct: 780 SEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDG 839
Query: 307 XXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 366
+R ++QLLVE+DG GV V+A TNRPD +D ALLRPGRFDR + + P+
Sbjct: 840 VSVSDR--VMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNET 897
Query: 367 GRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARN--ESAQIT 424
R+ I +I+L+K+ ++ + LA++T G+ GADI+ +C EAA+ A E +I+
Sbjct: 898 DREAILKIHLRKIPCSSDICL--KELASITKGYTGADISLICREAAIAALEESLEMEEIS 955
Query: 425 MQHFEAAIDRV 435
M+H +AAI ++
Sbjct: 956 MRHLKAAISQI 966
Score = 346 (126.9 bits), Expect = 5.5e-27, Sum P(2) = 5.5e-27
Identities = 81/212 (38%), Positives = 115/212 (54%)
Query: 211 LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGP 270
+KN LG + KG L+ GPPGTGKT LA+ A SGV F S++G + + ++G
Sbjct: 406 IKN--SLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESE 463
Query: 271 SRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTA 330
+ +F+ A P++VFID++DAI + +TL L MDG T
Sbjct: 464 KALDEVFRSASNATPAVVFIDDLDAIAPARKEGGEEL-SQRMVATLLNL---MDGISRTD 519
Query: 331 GVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQ 390
GVVV+A TNRPD ++ AL RPGR DR+I I P R I I L+ ++ + + +
Sbjct: 520 GVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMR-HSLSNIQVE 578
Query: 391 RLAALTPGFAGADIANVCNEAALIAARNESAQ 422
+LA T GF GAD++ +C EAA + R Q
Sbjct: 579 QLAMATHGFVGADLSALCCEAAFVCLRRHLDQ 610
Score = 38 (18.4 bits), Expect = 5.5e-27, Sum P(2) = 5.5e-27
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 568 MTKPYSSKTGAIIDNEVREWVGKAYDHTVKLIEEHREHV-AQIAE----ELLEKEVLHQ- 621
+TK Y TGA I RE A + ++++ E H+ A I++ E+L + L +
Sbjct: 924 ITKGY---TGADISLICREAAIAALEESLEMEEISMRHLKAAISQIEPTEILSYKALSEK 980
Query: 622 -DDLVRVLGERPFKHSEPTNYDR 643
LV +R + ++P N R
Sbjct: 981 FQRLVHTDPQREEEVTQPGNKSR 1003
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 102/264 (38%), Positives = 152/264 (57%)
Query: 177 TITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPG 235
++ K+D + + D+ G + QE+ E V L +P+ YEE+G K PKG +L G PG
Sbjct: 191 SVMKLDKAPTES--YADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPG 248
Query: 236 TGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDA 295
TGKTLLAKA A ++ FL + GS+ ++ ++G GP VR +FQ A + APSIVFIDEIDA
Sbjct: 249 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDA 308
Query: 296 IXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
I E + T+ +LL ++DGF V V+ TN+ + LD AL+RPGR D
Sbjct: 309 IGTKRYDSTSGGER-EIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRID 367
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNE---PSFYSQRLAALTPGFAGADIANVCNEAA 412
R+I + PD + +IF ++ K+ L ++ F +Q+ +GADI +C EA
Sbjct: 368 RKILFENPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQK-----DDLSGADIRAICTEAG 422
Query: 413 LIAARNESAQITMQHFEAAIDRVI 436
L+A R ++ M F AA +R++
Sbjct: 423 LMALRERRMRVQMDDFRAARERIM 446
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 99/255 (38%), Positives = 146/255 (57%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I+ + + K V + D+ GCD KQEI E V L + + Y+++G P+G LL GPP
Sbjct: 139 SSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPP 198
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
GTGKT+LAKA A + F+ + GS+F++ ++G GP VR +F+ A++ AP+I+FIDE+D
Sbjct: 199 GTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVD 258
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF T V V+ TNR D LD ALLRPGR
Sbjct: 259 AIATARFDAQTGADR-EVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRL 317
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD + + +FQ+ K+ L +E + + + A+IA +C EA +
Sbjct: 318 DRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDL--EDYVSRPDKISAAEIAAICQEAGMH 375
Query: 415 AARNESAQITMQHFE 429
A R I + FE
Sbjct: 376 AVRKNRYVILPKDFE 390
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 97/257 (37%), Positives = 152/257 (59%)
Query: 194 VAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVP 252
V G + +EI E + +K+P+ +E LG PKG +L GPPGTGKTLLA+A A +
Sbjct: 150 VGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCK 209
Query: 253 FLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDER 312
F+ +SG++ ++ ++G G VR LF AR+ APSI+F+DEID+I + E
Sbjct: 210 FIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGG-DSEV 268
Query: 313 ESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIF 372
+ T+ +LL ++DGF T+ + ++ TNR DILD ALLRPGR DR+I P + R +I
Sbjct: 269 QRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEIL 328
Query: 373 QIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAI 432
+I+ +K+ L + +++A G +GAD+ VC EA + A R +T + FE A+
Sbjct: 329 RIHSRKMNLTRGINL--RKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAV 386
Query: 433 DRVIGGLEKKNKVISKL 449
+V+ ++ ++KL
Sbjct: 387 GKVMNKNQETAISVAKL 403
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 438 (159.2 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 103/276 (37%), Positives = 153/276 (55%)
Query: 182 DMNAKD--KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGK 238
+M+ +D V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGTGK
Sbjct: 121 NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK 180
Query: 239 TLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXX 298
TLLA+A A + FL + S ++ ++G +R +F AR P I+F+DEIDAI
Sbjct: 181 TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 240
Query: 299 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQI 358
E + TL +LL +MDGF T V ++ TNRPD LD ALLRPGR DR+I
Sbjct: 241 RRFSEGTSADR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
Query: 359 TIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARN 418
ID P+ + R I +I+ + E + + + L+ GF GAD+ NVC EA + A R
Sbjct: 300 HIDLPNEQARLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLGNVCTEAGMFAIRA 357
Query: 419 ESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTV 454
+ + + F A+ +V + K K+ SKL+ + V
Sbjct: 358 DHDFVVQEDFMKAVRKVA---DSK-KLESKLDYKPV 389
Score = 40 (19.1 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 28 SFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNE 66
+ Q+++ KLLE +D + + K K +S N+
Sbjct: 8 ALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND 46
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 437 (158.9 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 103/276 (37%), Positives = 153/276 (55%)
Query: 182 DMNAKD--KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGK 238
+M+ +D V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGTGK
Sbjct: 121 NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK 180
Query: 239 TLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXX 298
TLLA+A A + FL + S ++ ++G +R +F AR P I+F+DEIDAI
Sbjct: 181 TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 240
Query: 299 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQI 358
E + TL +LL +MDGF T V ++ TNRPD LD ALLRPGR DR+I
Sbjct: 241 RRFSEGTSADR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
Query: 359 TIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARN 418
ID P+ + R I +I+ + E + + + L+ GF GAD+ NVC EA + A R
Sbjct: 300 HIDLPNEQARLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRA 357
Query: 419 ESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTV 454
+ + + F A+ +V + K K+ SKL+ + V
Sbjct: 358 DHDFVVQEDFMKAVRKVA---DSK-KLESKLDYKPV 389
Score = 40 (19.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 28 SFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNE 66
+ Q+++ KLLE +D + + K K +S N+
Sbjct: 8 ALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND 46
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 437 (158.9 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 103/276 (37%), Positives = 153/276 (55%)
Query: 182 DMNAKD--KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGK 238
+M+ +D V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGTGK
Sbjct: 127 NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK 186
Query: 239 TLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXX 298
TLLA+A A + FL + S ++ ++G +R +F AR P I+F+DEIDAI
Sbjct: 187 TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 246
Query: 299 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQI 358
E + TL +LL +MDGF T V ++ TNRPD LD ALLRPGR DR+I
Sbjct: 247 RRFSEGTSADR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 305
Query: 359 TIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARN 418
ID P+ + R I +I+ + E + + + L+ GF GAD+ NVC EA + A R
Sbjct: 306 HIDLPNEQARLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRA 363
Query: 419 ESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTV 454
+ + + F A+ +V + K K+ SKL+ + V
Sbjct: 364 DHDFVVQEDFMKAVRKVA---DSK-KLESKLDYKPV 395
Score = 40 (19.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 28 SFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNE 66
+ Q+++ KLLE +D + + K K +S N+
Sbjct: 14 ALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND 52
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 437 (158.9 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 103/276 (37%), Positives = 153/276 (55%)
Query: 182 DMNAKD--KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGK 238
+M+ +D V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGTGK
Sbjct: 121 NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK 180
Query: 239 TLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXX 298
TLLA+A A + FL + S ++ ++G +R +F AR P I+F+DEIDAI
Sbjct: 181 TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 240
Query: 299 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQI 358
E + TL +LL +MDGF T V ++ TNRPD LD ALLRPGR DR+I
Sbjct: 241 RRFSEGTSADR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
Query: 359 TIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARN 418
ID P+ + R I +I+ + E + + + L+ GF GAD+ NVC EA + A R
Sbjct: 300 HIDLPNEQARLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRA 357
Query: 419 ESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTV 454
+ + + F A+ +V + K K+ SKL+ + V
Sbjct: 358 DHDFVVQEDFMKAVRKVA---DSK-KLESKLDYKPV 389
Score = 40 (19.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 28 SFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNE 66
+ Q+++ KLLE +D + + K K +S N+
Sbjct: 8 ALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND 46
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 437 (158.9 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 103/276 (37%), Positives = 153/276 (55%)
Query: 182 DMNAKD--KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGK 238
+M+ +D V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGTGK
Sbjct: 135 NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK 194
Query: 239 TLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXX 298
TLLA+A A + FL + S ++ ++G +R +F AR P I+F+DEIDAI
Sbjct: 195 TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 254
Query: 299 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQI 358
E + TL +LL +MDGF T V ++ TNRPD LD ALLRPGR DR+I
Sbjct: 255 RRFSEGTSADR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 313
Query: 359 TIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARN 418
ID P+ + R I +I+ + E + + + L+ GF GAD+ NVC EA + A R
Sbjct: 314 HIDLPNEQARLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRA 371
Query: 419 ESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTV 454
+ + + F A+ +V + K K+ SKL+ + V
Sbjct: 372 DHDFVVQEDFMKAVRKVA---DSK-KLESKLDYKPV 403
Score = 40 (19.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 28 SFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNE 66
+ Q+++ KLLE +D + + K K +S N+
Sbjct: 22 ALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND 60
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 437 (158.9 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 103/276 (37%), Positives = 153/276 (55%)
Query: 182 DMNAKD--KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGK 238
+M+ +D V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGTGK
Sbjct: 121 NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK 180
Query: 239 TLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXX 298
TLLA+A A + FL + S ++ ++G +R +F AR P I+F+DEIDAI
Sbjct: 181 TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 240
Query: 299 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQI 358
E + TL +LL +MDGF T V ++ TNRPD LD ALLRPGR DR+I
Sbjct: 241 RRFSEGTSADR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
Query: 359 TIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARN 418
ID P+ + R I +I+ + E + + + L+ GF GAD+ NVC EA + A R
Sbjct: 300 HIDLPNEQARLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRA 357
Query: 419 ESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTV 454
+ + + F A+ +V + K K+ SKL+ + V
Sbjct: 358 DHDFVVQEDFMKAVRKVA---DSK-KLESKLDYKPV 389
Score = 40 (19.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 28 SFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNE 66
+ Q+++ KLLE +D + + K K +S N+
Sbjct: 8 ALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND 46
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 437 (158.9 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 103/276 (37%), Positives = 153/276 (55%)
Query: 182 DMNAKD--KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGK 238
+M+ +D V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGTGK
Sbjct: 121 NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK 180
Query: 239 TLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXX 298
TLLA+A A + FL + S ++ ++G +R +F AR P I+F+DEIDAI
Sbjct: 181 TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 240
Query: 299 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQI 358
E + TL +LL +MDGF T V ++ TNRPD LD ALLRPGR DR+I
Sbjct: 241 RRFSEGTSADR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
Query: 359 TIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARN 418
ID P+ + R I +I+ + E + + + L+ GF GAD+ NVC EA + A R
Sbjct: 300 HIDLPNEQARLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRA 357
Query: 419 ESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTV 454
+ + + F A+ +V + K K+ SKL+ + V
Sbjct: 358 DHDFVVQEDFMKAVRKVA---DSK-KLESKLDYKPV 389
Score = 40 (19.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 28 SFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNE 66
+ Q+++ KLLE +D + + K K +S N+
Sbjct: 8 ALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND 46
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 437 (158.9 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 103/276 (37%), Positives = 153/276 (55%)
Query: 182 DMNAKD--KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGK 238
+M+ +D V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGTGK
Sbjct: 135 NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK 194
Query: 239 TLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXX 298
TLLA+A A + FL + S ++ ++G +R +F AR P I+F+DEIDAI
Sbjct: 195 TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 254
Query: 299 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQI 358
E + TL +LL +MDGF T V ++ TNRPD LD ALLRPGR DR+I
Sbjct: 255 RRFSEGTSADR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 313
Query: 359 TIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARN 418
ID P+ + R I +I+ + E + + + L+ GF GAD+ NVC EA + A R
Sbjct: 314 HIDLPNEQARLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRA 371
Query: 419 ESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTV 454
+ + + F A+ +V + K K+ SKL+ + V
Sbjct: 372 DHDFVVQEDFMKAVRKVA---DSK-KLESKLDYKPV 403
Score = 40 (19.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 28 SFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNE 66
+ Q+++ KLLE +D + + K K +S N+
Sbjct: 22 ALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND 60
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 437 (158.9 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
Identities = 103/276 (37%), Positives = 153/276 (55%)
Query: 182 DMNAKD--KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGK 238
+M+ +D V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGTGK
Sbjct: 113 NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK 172
Query: 239 TLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXX 298
TLLA+A A + FL + S ++ ++G +R +F AR P I+F+DEIDAI
Sbjct: 173 TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 232
Query: 299 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQI 358
E + TL +LL +MDGF T V ++ TNRPD LD ALLRPGR DR+I
Sbjct: 233 RRFSEGTSADR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 291
Query: 359 TIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARN 418
ID P+ + R I +I+ + E + + + L+ GF GAD+ NVC EA + A R
Sbjct: 292 HIDLPNEQARLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRA 349
Query: 419 ESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTV 454
+ + + F A+ +V + K K+ SKL+ + V
Sbjct: 350 DHDFVVQEDFMKAVRKVA---DSK-KLESKLDYKPV 381
Score = 39 (18.8 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 30 QEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNE 66
Q+++ KLLE +D + + K K +S N+
Sbjct: 2 QDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND 38
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 437 (158.9 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
Identities = 102/276 (36%), Positives = 154/276 (55%)
Query: 182 DMNAKD--KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGK 238
+M+ +D V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGTGK
Sbjct: 121 NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK 180
Query: 239 TLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXX 298
TLLA+A A + FL + S ++ ++G +R +F AR P I+F+DEIDAI
Sbjct: 181 TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG 240
Query: 299 XXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQI 358
E + TL +LL +MDGF T V ++ TNRPD LD ALLRPGR DR+I
Sbjct: 241 RRFSEGTSADR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKI 299
Query: 359 TIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARN 418
I+ P+ + R I +I+ + + + + + L+ GF GAD+ NVC EA + A R
Sbjct: 300 HIELPNEQARLDILKIHSGPITKHGDIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRA 357
Query: 419 ESAQITMQHFEAAIDRVIGGLEKKNKVISKLERRTV 454
+ +T + F A+ +V + K K+ SKL+ + V
Sbjct: 358 DHEYVTQEDFMKAVRKVA---DSK-KLESKLDYKPV 389
Score = 39 (18.8 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 30 QEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNE 66
Q+++ KLLE +D + + K K +S N+
Sbjct: 10 QDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND 46
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 436 (158.5 bits), Expect = 5.3e-43, Sum P(2) = 5.3e-43
Identities = 101/267 (37%), Positives = 148/267 (55%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
+ FL + S ++ ++G +R +F AR P I+F+DEIDAI
Sbjct: 204 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 308 XNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 367
E + TL +LL +MDGF T V ++ TNRPD LD ALLRPGR DR+I ID P+ +
Sbjct: 264 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 368 RDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQH 427
R I +I+ + E + + + L+ GF GAD+ NVC EA + A R + + +
Sbjct: 323 RLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 380
Query: 428 FEAAIDRVIGGLEKKNKVISKLERRTV 454
F A+ +V + K K+ SKL+ + V
Sbjct: 381 FMKAVRKVA---DSK-KLESKLDYKPV 403
Score = 40 (19.1 bits), Expect = 5.3e-43, Sum P(2) = 5.3e-43
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 28 SFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNE 66
+ Q+++ KLLE +D + + K K +S N+
Sbjct: 22 ALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND 60
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 436 (158.5 bits), Expect = 5.3e-43, Sum P(2) = 5.3e-43
Identities = 101/267 (37%), Positives = 148/267 (55%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
V + ++ G E +E+ E + L NP+ ++ +G PKG LL GPPGTGKTLLA+A A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
+ FL + S ++ ++G +R +F AR P I+F+DEIDAI
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 308 XNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 367
E + TL +LL +MDGF T V ++ TNRPD LD ALLRPGR DR+I ID P+ +
Sbjct: 250 DR-EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 368 RDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQH 427
R I +I+ + E + + + L+ GF GAD+ NVC EA + A R + + +
Sbjct: 309 RLDILKIHAGPITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Query: 428 FEAAIDRVIGGLEKKNKVISKLERRTV 454
F A+ +V + K K+ SKL+ + V
Sbjct: 367 FMKAVRKVA---DSK-KLESKLDYKPV 389
Score = 40 (19.1 bits), Expect = 5.3e-43, Sum P(2) = 5.3e-43
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 28 SFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNE 66
+ Q+++ KLLE +D + + K K +S N+
Sbjct: 8 ALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND 46
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 454 (164.9 bits), Expect = 6.5e-43, P = 6.5e-43
Identities = 100/256 (39%), Positives = 150/256 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT
Sbjct: 137 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 196
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ APSI+FIDE+DAI
Sbjct: 197 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAI 256
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF T V V+A TNR DILD ALLR GR DR
Sbjct: 257 GNKRFDSEKAGDR-EVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDR 315
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R +I QI+ +K+ + + ++ + LA T F GA VC EA +IA
Sbjct: 316 KIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGIIAL 373
Query: 417 RNESAQITMQHFEAAI 432
R + ++T + + I
Sbjct: 374 RRGATELTHEDYMEGI 389
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 436 (158.5 bits), Expect = 6.8e-43, Sum P(2) = 6.8e-43
Identities = 96/255 (37%), Positives = 142/255 (55%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
+TI+ + + K + + D+ G D KQEI E V L + + Y+++G P+G LL GPP
Sbjct: 136 STISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPP 195
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
G GKT+LAKA A + F+ + GS+F++ ++G GP VR LF+ A+Q +PSI+FIDEID
Sbjct: 196 GCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEID 255
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF T + V+ TNR D LD ALLRPGR
Sbjct: 256 AIATKRFDAQTGADR-EVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRL 314
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I + PD + + +F K+ + + + + A + ADI +C EA +
Sbjct: 315 DRKIELPLPDRRQKRLVFTTITSKMNVGEDVDL--EDIIARPDKISNADINAICQEAGMH 372
Query: 415 AARNESAQITMQHFE 429
A R + + FE
Sbjct: 373 AVRENRYVVNAKDFE 387
Score = 39 (18.8 bits), Expect = 6.8e-43, Sum P(2) = 6.8e-43
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 97 VESFEEKLEEAQEALGIDPHD-YI 119
+ F E+ E + G+DPHD Y+
Sbjct: 8 IAQFHEQSLEKYD--GLDPHDLYV 29
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 452 (164.2 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 102/271 (37%), Positives = 156/271 (57%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ M+++ K + DV G D+ +E++E + +K K++++G + PKGAL+ GPPGT
Sbjct: 167 VKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGT 226
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++ ++M++G G VR F A++ AP+I+FIDE+DAI
Sbjct: 227 GKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAI 286
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V VLA TNR D+LD ALLR GR DR
Sbjct: 287 GTKRFDSEKSGDR-EVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDR 345
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P R QI QI+ +K+ D++ ++ Q LA T F GA + V EA +IA
Sbjct: 346 KIEFPLPSEDSRAQILQIHSRKMTTDDDINW--QELARSTDEFNGAQLKAVTVEAGMIAL 403
Query: 417 RNESAQITMQHFEAAIDRVIGGLEKKNKVIS 447
RN + + + F I V +K+K +S
Sbjct: 404 RNGQSSVKHEDFVEGISEVQA---RKSKSVS 431
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 451 (163.8 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 101/255 (39%), Positives = 145/255 (56%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I + + + V + D+ G D KQE+ E V L P+ YE++G + P G L+ GPP
Sbjct: 122 SSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPP 181
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
GTGKT+L KA A E+ V F+ + GS+F++ ++G GP VR +F+ AR+ +PSI+FIDE+D
Sbjct: 182 GTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVD 241
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF + V V+ TNR D LD ALLRPGR
Sbjct: 242 AIATKRFDAQTGADR-EVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRL 300
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD K + IFQ + K+ + ++ + S T + ADIA + EA +
Sbjct: 301 DRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIES--FVVRTDKISAADIAAIAQEAGMQ 358
Query: 415 AARNESAQITMQHFE 429
A R IT FE
Sbjct: 359 AIRKNRYIITANDFE 373
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 451 (163.8 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 101/255 (39%), Positives = 145/255 (56%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I + + + V + D+ G D KQE+ E V L P+ YE++G + P G L+ GPP
Sbjct: 122 SSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPP 181
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
GTGKT+L KA A E+ V F+ + GS+F++ ++G GP VR +F+ AR+ +PSI+FIDE+D
Sbjct: 182 GTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVD 241
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF + V V+ TNR D LD ALLRPGR
Sbjct: 242 AIATKRFDAQTGADR-EVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRL 300
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD K + IFQ + K+ + ++ + S T + ADIA + EA +
Sbjct: 301 DRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIES--FVVRTDKISAADIAAIAQEAGMQ 358
Query: 415 AARNESAQITMQHFE 429
A R IT FE
Sbjct: 359 AIRKNRYIITANDFE 373
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 449 (163.1 bits), Expect = 2.6e-42, P = 2.6e-42
Identities = 99/256 (38%), Positives = 149/256 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT
Sbjct: 118 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 177
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ APSI+FIDE+DAI
Sbjct: 178 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAI 237
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF V V+A TNR DILD ALLR GR DR
Sbjct: 238 GTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 296
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R +I QI+ +K+ + + ++ + LA T F GA VC EA +IA
Sbjct: 297 KIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIAL 354
Query: 417 RNESAQITMQHFEAAI 432
R + ++T + + I
Sbjct: 355 RRGATELTHEDYMEGI 370
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 449 (163.1 bits), Expect = 2.6e-42, P = 2.6e-42
Identities = 99/256 (38%), Positives = 149/256 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT
Sbjct: 122 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 181
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ APSI+FIDE+DAI
Sbjct: 182 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAI 241
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF V V+A TNR DILD ALLR GR DR
Sbjct: 242 GTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 300
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R +I QI+ +K+ + + ++ + LA T F GA VC EA +IA
Sbjct: 301 KIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIAL 358
Query: 417 RNESAQITMQHFEAAI 432
R + ++T + + I
Sbjct: 359 RRGATELTHEDYMEGI 374
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 449 (163.1 bits), Expect = 2.6e-42, P = 2.6e-42
Identities = 99/256 (38%), Positives = 149/256 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT
Sbjct: 172 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 231
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ APSI+FIDE+DAI
Sbjct: 232 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAI 291
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF V V+A TNR DILD ALLR GR DR
Sbjct: 292 GTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 350
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R +I QI+ +K+ + + ++ + LA T F GA VC EA +IA
Sbjct: 351 KIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIAL 408
Query: 417 RNESAQITMQHFEAAI 432
R + ++T + + I
Sbjct: 409 RRGATELTHEDYMEGI 424
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 449 (163.1 bits), Expect = 2.6e-42, P = 2.6e-42
Identities = 99/256 (38%), Positives = 149/256 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT
Sbjct: 130 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 189
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ APSI+FIDE+DAI
Sbjct: 190 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAI 249
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF V V+A TNR DILD ALLR GR DR
Sbjct: 250 GTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 308
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R +I QI+ +K+ + + ++ + LA T F GA VC EA +IA
Sbjct: 309 KIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIAL 366
Query: 417 RNESAQITMQHFEAAI 432
R + ++T + + I
Sbjct: 367 RRGATELTHEDYMEGI 382
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 449 (163.1 bits), Expect = 2.6e-42, P = 2.6e-42
Identities = 99/256 (38%), Positives = 149/256 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT
Sbjct: 172 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 231
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ APSI+FIDE+DAI
Sbjct: 232 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAI 291
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF V V+A TNR DILD ALLR GR DR
Sbjct: 292 GTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 350
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R +I QI+ +K+ + + ++ + LA T F GA VC EA +IA
Sbjct: 351 KIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIAL 408
Query: 417 RNESAQITMQHFEAAI 432
R + ++T + + I
Sbjct: 409 RRGATELTHEDYMEGI 424
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 449 (163.1 bits), Expect = 2.6e-42, P = 2.6e-42
Identities = 99/256 (38%), Positives = 149/256 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT
Sbjct: 179 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 238
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ APSI+FIDE+DAI
Sbjct: 239 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAI 298
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF V V+A TNR DILD ALLR GR DR
Sbjct: 299 GTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 357
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R +I QI+ +K+ + + ++ + LA T F GA VC EA +IA
Sbjct: 358 KIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIAL 415
Query: 417 RNESAQITMQHFEAAI 432
R + ++T + + I
Sbjct: 416 RRGATELTHEDYMEGI 431
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 449 (163.1 bits), Expect = 2.6e-42, P = 2.6e-42
Identities = 99/256 (38%), Positives = 149/256 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT
Sbjct: 175 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 234
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ APSI+FIDE+DAI
Sbjct: 235 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAI 294
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF V V+A TNR DILD ALLR GR DR
Sbjct: 295 GTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 353
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R +I QI+ +K+ + + ++ + LA T F GA VC EA +IA
Sbjct: 354 KIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIAL 411
Query: 417 RNESAQITMQHFEAAI 432
R + ++T + + I
Sbjct: 412 RRGATELTHEDYMEGI 427
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 449 (163.1 bits), Expect = 2.6e-42, P = 2.6e-42
Identities = 99/256 (38%), Positives = 149/256 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT
Sbjct: 172 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 231
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ APSI+FIDE+DAI
Sbjct: 232 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAI 291
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF V V+A TNR DILD ALLR GR DR
Sbjct: 292 GTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 350
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R +I QI+ +K+ + + ++ + LA T F GA VC EA +IA
Sbjct: 351 KIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIAL 408
Query: 417 RNESAQITMQHFEAAI 432
R + ++T + + I
Sbjct: 409 RRGATELTHEDYMEGI 424
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 449 (163.1 bits), Expect = 2.6e-42, P = 2.6e-42
Identities = 99/256 (38%), Positives = 149/256 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT
Sbjct: 175 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 234
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ APSI+FIDE+DAI
Sbjct: 235 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAI 294
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF V V+A TNR DILD ALLR GR DR
Sbjct: 295 GTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 353
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R +I QI+ +K+ + + ++ + LA T F GA VC EA +IA
Sbjct: 354 KIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCTDDFNGAQCKAVCVEAGMIAL 411
Query: 417 RNESAQITMQHFEAAI 432
R + ++T + + I
Sbjct: 412 RRGATELTHEDYMEGI 427
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 448 (162.8 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 101/261 (38%), Positives = 154/261 (59%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
A + M+++ + F D+ G D+ QE++E V + + +K++ LG PKG +L GPP
Sbjct: 163 ARVKAMEVDERPTEQFSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPP 222
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
GTGKTLLA+A A ++ FL ++G ++MF+G G VR F A++ AP+I+FIDE+D
Sbjct: 223 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 282
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + T+ +LL +++GF +TA + V+A TNR DIL ALLR GR
Sbjct: 283 AIGTKRFDSEKAGDR-EVQRTMLELLNQLNGFSSTADIKVIAATNRVDILP-ALLRSGRL 340
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I P+ + R +I QI+ +K+ + N+ +F + L+ T F GA VC EA +I
Sbjct: 341 DRKIEFPHPNEEARARIMQIHSRKMNVSNDVNF--EELSRSTDDFNGAQCKAVCVEAGMI 398
Query: 415 AARNESAQITMQHFEAAIDRV 435
A R + +T + F AI V
Sbjct: 399 ALRRSANSVTHEDFMDAIMEV 419
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 463 (168.0 bits), Expect = 9.8e-42, P = 9.8e-42
Identities = 104/259 (40%), Positives = 157/259 (60%)
Query: 184 NAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLA 242
N+ ++V + D+ GC + +I E V L++P+ ++ +G K PKG L+ GPPGTGKT++A
Sbjct: 207 NSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMA 266
Query: 243 KATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXX 302
+A A E+G F ++G + M G S +R F+EA + +PSI+FIDEID+I
Sbjct: 267 RAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDK 326
Query: 303 XXXXXXNDERES-TLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITID 361
N E E ++QLL MDG + VVV+A TNRP+ +D AL R GRFDR++ I
Sbjct: 327 T-----NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIG 381
Query: 362 KPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESA 421
PD +GR +I +I+ K +KL ++ + +A+ T GF GADIA++C+EAA+ R +
Sbjct: 382 VPDAEGRLEILRIHTKNMKLADDVDL--EAIASETHGFVGADIASLCSEAAMQQIREKMD 439
Query: 422 QITMQHFEAAID-RVIGGL 439
I ++ E ID V+ L
Sbjct: 440 LIDLE--EETIDTEVLNSL 456
Score = 429 (156.1 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 93/249 (37%), Positives = 136/249 (54%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
V + D+ G D K E+ E V + + +P +Y++ G KG L GPPGTGKTLLAKA A
Sbjct: 485 VTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVAT 544
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
E F+S+ G + + M+ G S +R +F +AR AP++VF+DE+D+I
Sbjct: 545 EVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDA 604
Query: 308 XNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 367
+ +NQLL EMDG V V+ TNRPD +D ALLRPGR D+ I + PD
Sbjct: 605 GGAS-DRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPA 663
Query: 368 RDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNE-SAQITMQ 426
R I Q L+ L EP +A +T GF+GAD++ + +A A ++ AQ+ +
Sbjct: 664 RLSILQAQLRNTPL--EPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVKIN 721
Query: 427 HFEAAIDRV 435
+ ++V
Sbjct: 722 KIKEEKEKV 730
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 463 (168.0 bits), Expect = 9.8e-42, P = 9.8e-42
Identities = 104/259 (40%), Positives = 157/259 (60%)
Query: 184 NAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLA 242
N+ ++V + D+ GC + +I E V L++P+ ++ +G K PKG L+ GPPGTGKT++A
Sbjct: 207 NSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMA 266
Query: 243 KATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXX 302
+A A E+G F ++G + M G S +R F+EA + +PSI+FIDEID+I
Sbjct: 267 RAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDK 326
Query: 303 XXXXXXNDERES-TLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITID 361
N E E ++QLL MDG + VVV+A TNRP+ +D AL R GRFDR++ I
Sbjct: 327 T-----NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIG 381
Query: 362 KPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESA 421
PD +GR +I +I+ K +KL ++ + +A+ T GF GADIA++C+EAA+ R +
Sbjct: 382 VPDAEGRLEILRIHTKNMKLADDVDL--EAIASETHGFVGADIASLCSEAAMQQIREKMD 439
Query: 422 QITMQHFEAAID-RVIGGL 439
I ++ E ID V+ L
Sbjct: 440 LIDLE--EETIDTEVLNSL 456
Score = 429 (156.1 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 93/249 (37%), Positives = 136/249 (54%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
V + D+ G D K E+ E V + + +P +Y++ G KG L GPPGTGKTLLAKA A
Sbjct: 485 VTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVAT 544
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
E F+S+ G + + M+ G S +R +F +AR AP++VF+DE+D+I
Sbjct: 545 EVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDA 604
Query: 308 XNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 367
+ +NQLL EMDG V V+ TNRPD +D ALLRPGR D+ I + PD
Sbjct: 605 GGAS-DRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPA 663
Query: 368 RDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNE-SAQITMQ 426
R I Q L+ L EP +A +T GF+GAD++ + +A A ++ AQ+ +
Sbjct: 664 RLSILQAQLRNTPL--EPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVKIN 721
Query: 427 HFEAAIDRV 435
+ ++V
Sbjct: 722 KIKEEKEKV 730
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 451 (163.8 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 100/250 (40%), Positives = 142/250 (56%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
V + D+ G + K ++ + V + LK+P+ + +G + PKG LL GPPG KT++AKA A
Sbjct: 624 VSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALAN 683
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
ESG+ FL++ G + M +VG VR F++AR APSI+F DE+DA+
Sbjct: 684 ESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAG 743
Query: 308 XNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 367
+R L QLL EMDG V +LA TNRPD +DKAL+RPGR DR I + PD
Sbjct: 744 NVADR--VLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAAT 801
Query: 368 RDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNE-SAQITMQ 426
R +IF++ + + NE L T ++GA+I VC EAAL+A + A + M+
Sbjct: 802 RREIFKLQFHSMPVSNEVDL--DELILQTDAYSGAEIVAVCREAALLALEEDIQANLIMK 859
Query: 427 -HFEAAIDRV 435
HF A+ V
Sbjct: 860 RHFTQALSTV 869
Score = 372 (136.0 bits), Expect = 6.6e-31, Sum P(3) = 6.6e-31
Identities = 92/253 (36%), Positives = 135/253 (53%)
Query: 175 KATITKMDMNAKD-----KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGA 228
+ T++D N+K+ KV + + G + I E + LK P+ ++ G P+G
Sbjct: 331 RVNFTEIDKNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGV 390
Query: 229 LLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIV 288
LL GPPGTGKT++A+A A E G ++G + + F G +++R +F EA PSI+
Sbjct: 391 LLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSII 450
Query: 289 FIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAG---VVVLAGTNRPDILD 345
FIDE+DA+ N+ + + LL MDG G+ V+VL TNRP LD
Sbjct: 451 FIDELDALCPKREGAQ----NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALD 506
Query: 346 KALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLK-LDNEPSFYSQRLAALTPGFAGADI 404
AL RPGRFD++I I P+ + R I Q L+++ L E +LA G+ GAD+
Sbjct: 507 AALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELL--QLANSAHGYVGADL 564
Query: 405 ANVCNEAALIAAR 417
+CNEA L A R
Sbjct: 565 KVLCNEAGLCALR 577
Score = 48 (22.0 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 26 QISFQEFKNKLLEPGLVDRIVVTNKSVAKVFVKSTPRSTNETND---DFTQSPVNGS 79
+ S E +L + L D + T++S + R TN+ +D D TQSP +GS
Sbjct: 225 ETSSLELSLQLSQLDLEDTQIPTSRSTP--YKPIDDRITNKASDVLLDVTQSPGDGS 279
Score = 42 (19.8 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 93 NIGSVESFEEKLEEAQE 109
+IG +ES + KLE+A E
Sbjct: 628 DIGGLESIKLKLEQAVE 644
Score = 37 (18.1 bits), Expect = 6.6e-31, Sum P(3) = 6.6e-31
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 466 WFLEHAEPLLKVTIVP-RGTAALG 488
W L+H E +++ I P +G G
Sbjct: 645 WPLKHPESFIRMGIQPPKGVLLYG 668
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 443 (161.0 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 95/256 (37%), Positives = 150/256 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ GCD+ QE++E V + + ++ LG PKG L+ GPPGT
Sbjct: 163 VKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGT 222
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKT++A+A A ++ FL ++G ++MF+G G VR F A++ AP+I+FIDE+DAI
Sbjct: 223 GKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 282
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V+A TNR D+LD ALLR GR DR
Sbjct: 283 GTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDR 341
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I + P+ R +I QI+ +K+ ++ + +F + LA T F GA VC EA +IA
Sbjct: 342 KIELPHPNEDARARIMQIHSRKMNVNKDVNF--EELARCTDDFNGAQCKAVCVEAGMIAL 399
Query: 417 RNESAQITMQHFEAAI 432
R ++ +I + F AI
Sbjct: 400 RRDATEILHEDFMDAI 415
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 443 (161.0 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 95/256 (37%), Positives = 150/256 (58%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ GCD+ QE++E V + + ++ LG PKG L+ GPPGT
Sbjct: 163 VKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGT 222
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKT++A+A A ++ FL ++G ++MF+G G VR F A++ AP+I+FIDE+DAI
Sbjct: 223 GKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI 282
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V+A TNR D+LD ALLR GR DR
Sbjct: 283 GTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDR 341
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I + P+ R +I QI+ +K+ ++ + +F + LA T F GA VC EA +IA
Sbjct: 342 KIELPHPNEDARARIMQIHSRKMNVNKDVNF--EELARCTDDFNGAQCKAVCVEAGMIAL 399
Query: 417 RNESAQITMQHFEAAI 432
R ++ +I + F AI
Sbjct: 400 RRDATEILHEDFMDAI 415
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 443 (161.0 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 99/256 (38%), Positives = 148/256 (57%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT
Sbjct: 160 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 219
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ APSI+FIDE+DAI
Sbjct: 220 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAI 279
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF V V+A TNR DILD ALLR GR DR
Sbjct: 280 GTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDR 338
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R +I QI+ +K+ + + +F + LA T F GA VC EA +IA
Sbjct: 339 KIEFPMPNEEARARIMQIHSRKMNVCPDVNF--EELARCTDDFNGAQCKAVCVEAGMIAL 396
Query: 417 RNESAQITMQHFEAAI 432
R + ++ + + I
Sbjct: 397 RRGATELNHEDYMEGI 412
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 442 (160.7 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 100/261 (38%), Positives = 148/261 (56%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ K+D + + D+ G + QEI E V L +P+ YEE+G K PKG +L G PGT
Sbjct: 179 VMKLDKAPTES--YADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGT 236
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLAKA A ++ FL + GS+ ++ ++G GP VR LF A + +PSIVFIDEIDAI
Sbjct: 237 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAI 296
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTA-GVVVLAGTNRPDILDKALLRPGRFD 355
E + T+ +LL ++DGF T+ + V+ TNR LD AL+RPGR D
Sbjct: 297 GTKRYDAQSGAER-EIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRID 355
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R+I + PD + +IF I+ K+ L + + + L +GA+I + +EA L+A
Sbjct: 356 RKILFENPDEATKRKIFTIHTSKMNLGEDVNL--EELIQCKDDLSGAEIKAIVSEAGLLA 413
Query: 416 ARNESAQITMQHFEAAIDRVI 436
R ++ M F A ++V+
Sbjct: 414 LRERRMRVVMDDFRQAREKVL 434
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 452 (164.2 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 100/248 (40%), Positives = 149/248 (60%)
Query: 184 NAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLA 242
N ++V + D+ GC + +I E V L++P+ ++ +G K P+G L+ GPPGTGKTL+A
Sbjct: 206 NNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMA 265
Query: 243 KATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXX 302
+A A E+G F ++G + M G S +R F+EA + AP+I+FIDEID+I
Sbjct: 266 RAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDK 325
Query: 303 XXXXXXNDERES-TLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITID 361
N E E ++QLL MDG + VVV+A TNRP+ +D AL R GRFDR++ I
Sbjct: 326 T-----NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIG 380
Query: 362 KPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESA 421
PD GR ++ +I+ K +KL ++ + LAA T G+ GADIA++C+EAA+ R +
Sbjct: 381 IPDATGRLEVLRIHTKNMKLADDVDL--EALAAETHGYVGADIASLCSEAAMQQIREKMD 438
Query: 422 QITMQHFE 429
I + E
Sbjct: 439 LIDLDEDE 446
Score = 431 (156.8 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 95/240 (39%), Positives = 131/240 (54%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
V + DV G DE K+E+ E V + + +P +Y + G KG L GPPGTGKTLLAKA A
Sbjct: 484 VTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVAT 543
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
E F+S+ G + + M+ G S +R +F +AR AP++VF+DE+D+I
Sbjct: 544 EVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDA 603
Query: 308 XNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 367
+ +NQLL EMDG V V+ TNRPD +D A+LRPGR D+ I + PD
Sbjct: 604 GGAS-DRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENA 662
Query: 368 RDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQH 427
R I L+K L EP +A T GF+GAD+ + AA A + +S + QH
Sbjct: 663 RLSILNAQLRKTPL--EPGLELTAIAKATQGFSGADLLYIVQRAAKYAIK-DSIEAHRQH 719
Score = 47 (21.6 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 588 VGKAYDHTVK-LIEEHREHVAQIAEELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKK 646
V +A + +K IE HR+H A+ E +E E + D + P +P Y K+
Sbjct: 701 VQRAAKYAIKDSIEAHRQHEAE-KEVKVEGEDVEMTDEGAKAEQEP--EVDPVPYIT-KE 756
Query: 647 GFLEDDKESKET 658
F E K +K +
Sbjct: 757 HFAEAMKTAKRS 768
Score = 44 (20.5 bits), Expect = 3.6e-41, Sum P(3) = 3.6e-41
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 623 DLVRVLGERPFKHSEPTNYDRFKKGFLEDDKESKETKEGGTAEDDNSSSPLEPEVVP 679
DL+ ++ +R K++ + + ++ E +KE K E D+ + + EPEV P
Sbjct: 696 DLLYIV-QRAAKYAIKDSIEAHRQH--EAEKEVKVEGEDVEMTDEGAKAEQEPEVDP 749
Score = 42 (19.8 bits), Expect = 5.9e-41, Sum P(3) = 5.9e-41
Identities = 22/87 (25%), Positives = 38/87 (43%)
Query: 516 RAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPY--- 572
RAA+ + I Q++ EK K+ V + K P+ D +TK +
Sbjct: 703 RAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAE--QEPEVDPVPYITKEHFAE 760
Query: 573 SSKTG--AIIDNEVREWVGKAYDHTVK 597
+ KT ++ D E+R + +AY +K
Sbjct: 761 AMKTAKRSVSDAELRRY--EAYSQQMK 785
Score = 37 (18.1 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 5/24 (20%), Positives = 13/24 (54%)
Query: 109 EALGIDPHDYIPVTYENEVNWYQE 132
+ + ++P +Y V + ++W E
Sbjct: 174 KVVDVEPEEYAVVAQDTIIHWEGE 197
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 441 (160.3 bits), Expect = 2.3e-41, P = 2.3e-41
Identities = 97/270 (35%), Positives = 154/270 (57%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ M+++ K + D+ G D+ QE++E V + + +++E +G K PKG L+ GPPGT
Sbjct: 154 VKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGT 213
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ +L ++G ++MF+G G VR F A++ P+I+FIDE+DAI
Sbjct: 214 GKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAI 273
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + A + V+A TNR DILD ALLR GR DR
Sbjct: 274 GTKRFDSEVSGDR-EVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDR 332
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R I QI+ +K+ + + +F LA + F GA + VC EA +IA
Sbjct: 333 KIEFPLPNEEARAHILQIHSRKMNVSADVNF--DELARSSEDFNGAQLKAVCVEAGMIAL 390
Query: 417 RNESAQITMQHFEAAIDRVIGGLEKKNKVI 446
R ++ F ++ + + KK K +
Sbjct: 391 RRGGTELIHNDF---VEGCVEVMAKKKKTL 417
>TAIR|locus:2206380 [details] [associations]
symbol:FTSH12 "FTSH protease 12" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS;IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009658 "chloroplast
organization" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 HSSP:Q01853
eggNOG:COG0465 GO:GO:0009535 EMBL:AC007202 GO:GO:0004176 KO:K03798
EMBL:AY035166 IPI:IPI00518515 PIR:A96827 RefSeq:NP_565212.1
UniGene:At.48395 UniGene:At.66914 ProteinModelPortal:Q9SAJ3
SMR:Q9SAJ3 STRING:Q9SAJ3 MEROPS:M41.A06 PaxDb:Q9SAJ3 PRIDE:Q9SAJ3
EnsemblPlants:AT1G79560.1 GeneID:844294 KEGG:ath:AT1G79560
GeneFarm:1828 TAIR:At1g79560 HOGENOM:HOG000090030 InParanoid:Q9SAJ3
OMA:QAVIFIC PhylomeDB:Q9SAJ3 ProtClustDB:CLSN2689328
Genevestigator:Q9SAJ3 Uniprot:Q9SAJ3
Length = 1008
Score = 452 (164.2 bits), Expect = 3.0e-41, Sum P(2) = 3.0e-41
Identities = 124/396 (31%), Positives = 202/396 (51%)
Query: 185 AKDKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKA 244
++ K +K+V + + E + ++ NP +Y E +G LL GPPGTGKTL A+
Sbjct: 486 SETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFART 545
Query: 245 TAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXX 304
A ESG+PF+ SG++F + G +++ +F AR+ AP+ VF+DEIDAI
Sbjct: 546 LAKESGLPFVFASGAEFTDSEKS-GAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARK- 603
Query: 305 XXXXNDERESTLNQLLVEMDG---------FGTTAGVVVLAGTNRPDILDKALLRPGRFD 355
+ R +T L+ ++DG F V+ + TNRPD LD +R GR D
Sbjct: 604 ----DPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRID 659
Query: 356 RQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIA 415
R++ I PD K R QIF ++ L + F +L T GF+GADI N+ NEAA+++
Sbjct: 660 RRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDF--GKLVFRTVGFSGADIRNLVNEAAIMS 717
Query: 416 ARNESAQITMQHFEAAIDR-VIGGL------EKKNKV---ISKLERRTVAYHESGHAVAG 465
R + I Q +D+ ++ G+ E++ K +S ++R +A HE+GH V
Sbjct: 718 VRKGRSYIYQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLA 777
Query: 466 WFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTL----GGRAAEQV 521
+ ++P G + + P E+++ F M + GGR AE+V
Sbjct: 778 HLFPRFDWHAFSQLLPGGKET-AVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERV 836
Query: 522 LLG-KISTGAQNDLEKVTKMTYAQVAVYGFSDKVGL 556
+ G ++ G ++DLEK+TK+ ++ + S ++GL
Sbjct: 837 VFGDNVTDGGKDDLEKITKIA-REMVISPQSARLGL 871
Score = 53 (23.7 bits), Expect = 3.0e-41, Sum P(2) = 3.0e-41
Identities = 32/149 (21%), Positives = 61/149 (40%)
Query: 535 EKVTKMTYAQVAVYGFSDKVGLLSFPQRDDTFEMTKPYSSKTGAIIDNEVREWVGKAYDH 594
E V A++ + K+G++ P D E+ K Y ++ E+ V + +
Sbjct: 859 EMVISPQSARLGLTQLVKKIGMVDLPDNPDG-ELIK-YRWDHPHVMPAEMSVEVSELFTR 916
Query: 595 TVKLIEEHREHVAQIAE-------ELLEKEVLHQDDLVRVLGERPFKHSEPTNYDRFKKG 647
+ E E +A A +L+ +E+L + + + E K P ++ F K
Sbjct: 917 ELTRYIEETEELAMNALRANRHILDLITRELLEKSRITGLEVEEKMKDLSPLMFEDFVKP 976
Query: 648 FL--EDDKESKETKEGGTAED-DNSSSPL 673
F DD+E K+ + + D ++PL
Sbjct: 977 FQINPDDEELLPHKDRVSYQPVDLRAAPL 1005
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 439 (159.6 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 99/270 (36%), Positives = 149/270 (55%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I + + K V + D+ G D KQE+ E V L + + Y+++G P+G L+ GPP
Sbjct: 148 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 207
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
G GKT+LAKA A + F+ + GS+F++ ++G GP VR +F+ A++ AP+I+FIDEID
Sbjct: 208 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID 267
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF V V+ TNR D LD ALLRPGR
Sbjct: 268 AIATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRL 326
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD + + IF K+ L E + A +GADI ++C E+ ++
Sbjct: 327 DRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGML 384
Query: 415 AARNESAQITMQHFEAAIDRVIGGLEKKNK 444
A R + + FE A VI E++++
Sbjct: 385 AVRENRYIVLAKDFEKAYKTVIKKDEQEHE 414
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 439 (159.6 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 99/270 (36%), Positives = 149/270 (55%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I + + K V + D+ G D KQE+ E V L + + Y+++G P+G L+ GPP
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
G GKT+LAKA A + F+ + GS+F++ ++G GP VR +F+ A++ AP+I+FIDEID
Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID 268
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF V V+ TNR D LD ALLRPGR
Sbjct: 269 AIATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRL 327
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD + + IF K+ L E + A +GADI ++C E+ ++
Sbjct: 328 DRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGML 385
Query: 415 AARNESAQITMQHFEAAIDRVIGGLEKKNK 444
A R + + FE A VI E++++
Sbjct: 386 AVRENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 439 (159.6 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 99/270 (36%), Positives = 149/270 (55%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I + + K V + D+ G D KQE+ E V L + + Y+++G P+G L+ GPP
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
G GKT+LAKA A + F+ + GS+F++ ++G GP VR +F+ A++ AP+I+FIDEID
Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID 268
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF V V+ TNR D LD ALLRPGR
Sbjct: 269 AIATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRL 327
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD + + IF K+ L E + A +GADI ++C E+ ++
Sbjct: 328 DRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGML 385
Query: 415 AARNESAQITMQHFEAAIDRVIGGLEKKNK 444
A R + + FE A VI E++++
Sbjct: 386 AVRENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 439 (159.6 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 99/270 (36%), Positives = 149/270 (55%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I + + K V + D+ G D KQE+ E V L + + Y+++G P+G L+ GPP
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
G GKT+LAKA A + F+ + GS+F++ ++G GP VR +F+ A++ AP+I+FIDEID
Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID 268
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF V V+ TNR D LD ALLRPGR
Sbjct: 269 AIATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRL 327
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD + + IF K+ L E + A +GADI ++C E+ ++
Sbjct: 328 DRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGML 385
Query: 415 AARNESAQITMQHFEAAIDRVIGGLEKKNK 444
A R + + FE A VI E++++
Sbjct: 386 AVRENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 439 (159.6 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 99/270 (36%), Positives = 149/270 (55%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I + + K V + D+ G D KQE+ E V L + + Y+++G P+G L+ GPP
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
G GKT+LAKA A + F+ + GS+F++ ++G GP VR +F+ A++ AP+I+FIDEID
Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID 268
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF V V+ TNR D LD ALLRPGR
Sbjct: 269 AIATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRL 327
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD + + IF K+ L E + A +GADI ++C E+ ++
Sbjct: 328 DRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGML 385
Query: 415 AARNESAQITMQHFEAAIDRVIGGLEKKNK 444
A R + + FE A VI E++++
Sbjct: 386 AVRENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 439 (159.6 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 99/270 (36%), Positives = 149/270 (55%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I + + K V + D+ G D KQE+ E V L + + Y+++G P+G L+ GPP
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
G GKT+LAKA A + F+ + GS+F++ ++G GP VR +F+ A++ AP+I+FIDEID
Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID 268
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF V V+ TNR D LD ALLRPGR
Sbjct: 269 AIATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRL 327
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD + + IF K+ L E + A +GADI ++C E+ ++
Sbjct: 328 DRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGML 385
Query: 415 AARNESAQITMQHFEAAIDRVIGGLEKKNK 444
A R + + FE A VI E++++
Sbjct: 386 AVRENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 439 (159.6 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 99/270 (36%), Positives = 149/270 (55%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I + + K V + D+ G D KQE+ E V L + + Y+++G P+G L+ GPP
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
G GKT+LAKA A + F+ + GS+F++ ++G GP VR +F+ A++ AP+I+FIDEID
Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID 268
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF V V+ TNR D LD ALLRPGR
Sbjct: 269 AIATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRL 327
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD + + IF K+ L E + A +GADI ++C E+ ++
Sbjct: 328 DRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQESGML 385
Query: 415 AARNESAQITMQHFEAAIDRVIGGLEKKNK 444
A R + + FE A VI E++++
Sbjct: 386 AVRENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 438 (159.2 bits), Expect = 5.1e-41, P = 5.1e-41
Identities = 100/259 (38%), Positives = 142/259 (54%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ KM + + DV G E +E+ E V L NP+ ++ +G PKG LL GPPGT
Sbjct: 136 VYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGT 195
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A + FL + S ++ ++G +R +F AR P IVF+DEIDAI
Sbjct: 196 GKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAI 255
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + TL +LL ++DGF + V V+ TNRPD LD ALLRPGR DR
Sbjct: 256 GGRRFSEGTSADR-EIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDR 314
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I I P+ + R +I +I+ K+ E F + + L+ GF+ AD+ NVC EA + A
Sbjct: 315 KIEIGLPNEQSRLEILKIHSNKITKHGEIDF--EAVVKLSDGFSAADLRNVCTEAGMFAI 372
Query: 417 RNESAQITMQHFEAAIDRV 435
R E + + F A+ +V
Sbjct: 373 RAEREFVIDEDFMKAVRKV 391
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 438 (159.2 bits), Expect = 5.1e-41, P = 5.1e-41
Identities = 100/259 (38%), Positives = 142/259 (54%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ KM + + DV G E +E+ E V L NP+ ++ +G PKG LL GPPGT
Sbjct: 136 VYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGT 195
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A + FL + S ++ ++G +R +F AR P IVF+DEIDAI
Sbjct: 196 GKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAI 255
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + TL +LL ++DGF + V V+ TNRPD LD ALLRPGR DR
Sbjct: 256 GGRRFSEGTSADR-EIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDR 314
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I I P+ + R +I +I+ K+ E F + + L+ GF+ AD+ NVC EA + A
Sbjct: 315 KIEIGLPNEQSRLEILKIHSNKITKHGEIDF--EAVVKLSDGFSAADLRNVCTEAGMFAI 372
Query: 417 RNESAQITMQHFEAAIDRV 435
R E + + F A+ +V
Sbjct: 373 RAEREFVIDEDFMKAVRKV 391
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 416 (151.5 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 90/222 (40%), Positives = 132/222 (59%)
Query: 211 LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGP 270
+ + +K+E LG + PKG L+ GPPGTGKTLLA+A A ++ FL ++G ++MF+G G
Sbjct: 223 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGA 282
Query: 271 SRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTA 330
VR F A++ APSI+FIDE+DAI E + T+ +LL ++DGF
Sbjct: 283 KLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR-EVQRTMLELLNQLDGFQPNT 341
Query: 331 GVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQ 390
V V+A TNR DILD ALLR GR DR+I P+ + R +I QI+ +K+ + + ++ +
Sbjct: 342 QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNY--E 399
Query: 391 RLAALTPGFAGADIANVCNEAALIAARNESAQITMQHFEAAI 432
LA T F GA VC EA +IA R + ++T + + I
Sbjct: 400 ELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGI 441
Score = 44 (20.5 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVH 209
+ M+++ + + D+ G D+ QE+ E H
Sbjct: 173 VKAMEVDERPTEQYSDIGGLDKQIQEVREARH 204
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 455 (165.2 bits), Expect = 8.1e-41, P = 8.1e-41
Identities = 99/255 (38%), Positives = 141/255 (55%)
Query: 188 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 246
KV++ D+ G +E K ++ E + L+ + + LG PKG LL GPPG KTL AKA A
Sbjct: 512 KVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALA 571
Query: 247 GESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXX 306
ESG+ FL++ G + +VG +R +F++AR APSI+F DEIDA+
Sbjct: 572 TESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTS 631
Query: 307 XXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 366
N L LL E+DG GVV++A TNRPD +D ALLRPGR DR I + PD+
Sbjct: 632 AANH----VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVN 687
Query: 367 GRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNES--AQIT 424
R +I + KK + E LA T G++GA++ +C EA L A + A++
Sbjct: 688 ARLEILKKCTKKFNTE-ESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVE 746
Query: 425 MQHFEAAIDRVIGGL 439
++HFE A + G+
Sbjct: 747 LRHFEKAFKGIARGI 761
Score = 356 (130.4 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 81/242 (33%), Positives = 122/242 (50%)
Query: 175 KATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGP 233
K T N + + + V G D+ + + + L P + G P+G LL GP
Sbjct: 228 KETQANRKYNLPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGP 287
Query: 234 PGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEI 293
PGTGKT+L + A S L+++G + ++G + +R +F EAR+ PSI+FIDEI
Sbjct: 288 PGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEI 347
Query: 294 DAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGR 353
D+I +TL L MDG G VVV+A TNRP+ +D AL RPGR
Sbjct: 348 DSIAPNRANDDSGEVESRVVATL---LTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGR 404
Query: 354 FDRQITIDKPDIKGRDQIFQIYLKKLKLDNE--PSFYSQRLAALTPGFAGADIANVCNEA 411
FD+++ I PD+ R I ++ D S + +A+ T G+ GAD+ +C E+
Sbjct: 405 FDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRES 464
Query: 412 AL 413
+
Sbjct: 465 VM 466
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 435 (158.2 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 96/256 (37%), Positives = 148/256 (57%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHFLKNPK-KYEELGAKIPKGALLVGPPGT 236
+ M+++ + + D+ G D+ QE++E + N K K+E LG + PKG L+ GPPGT
Sbjct: 167 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 226
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A ++ FL ++G ++MF+G G VR F A++ APSI+FIDE+DA
Sbjct: 227 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA- 285
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
+ E + T+ +LL ++DGF V V+A TNR DILD ALLR GR D+
Sbjct: 286 TGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQ 345
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I P+ + R +I QI+ +K+ + + ++ + LA F GA VC EA +IA
Sbjct: 346 KIEFPMPNEEARARIMQIHSRKMNVSPDVNY--EELARCMDDFNGAQCKAVCVEAGMIAL 403
Query: 417 RNESAQITMQHFEAAI 432
R + ++T + + I
Sbjct: 404 RRGTTELTHEDYMEGI 419
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 435 (158.2 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 100/265 (37%), Positives = 144/265 (54%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ M + + F V G +E +E+ E + LKNP+ + +G K PKG LL GPPGT
Sbjct: 118 VYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGT 177
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A GV FL + S ++ ++G +R +F A++ P ++F+DEIDAI
Sbjct: 178 GKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAI 237
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + TL +LL +MDGF ++ TNRPD LD ALLRPGR DR
Sbjct: 238 GGRRFSEGTSADR-EIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDR 296
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
+I I P+ GR +I +I+L+K+ E + + L LT G GAD+ NV EA IA
Sbjct: 297 KIEIPLPNEVGRMEILKIHLEKVSKQGEIDY--EALVKLTDGTNGADLRNVVTEAGFIAI 354
Query: 417 RNESAQITMQHFEAAIDRVIGGLEK 441
+ + + +A R + L+K
Sbjct: 355 KEDRDYVIQSDLMSAA-RKVADLKK 378
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 435 (158.2 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 95/249 (38%), Positives = 136/249 (54%)
Query: 188 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 246
++ F + G E +E+ E + LKNP+ ++ +G K PKG LL GPPGTGKTLLAKA A
Sbjct: 177 EITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVA 236
Query: 247 GESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXX 306
G F+ S ++ ++G +R +F A++ P I+F+DE+DAI
Sbjct: 237 ATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTS 296
Query: 307 XXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 366
E + TL +LL +MDGF ++ TNRPD LD ALLRPGR DR++ I P+
Sbjct: 297 ADR-EIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEA 355
Query: 367 GRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQ 426
GR +IF+I+ K+K E F + ++ GF GADI N EA A R++ I
Sbjct: 356 GRLEIFKIHTAKVKKTGEFDF--EAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPD 413
Query: 427 HFEAAIDRV 435
A+ +V
Sbjct: 414 DLMKAVRKV 422
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 434 (157.8 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 98/270 (36%), Positives = 148/270 (54%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I + + K V + D+ G D KQE+ E V L + + Y+++G P+G L+ GPP
Sbjct: 149 SSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPP 208
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
G GKT+LAKA A + F+ + GS+F++ ++G GP VR +F+ A++ AP+I+FIDEID
Sbjct: 209 GCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID 268
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF V V+ TNR D LD ALL PGR
Sbjct: 269 AIATKRFDAQTGADR-EVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRL 327
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD + + +F K+ L E + A +GADI ++C EA ++
Sbjct: 328 DRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDL--EDYVARPDKISGADINSICQEAGML 385
Query: 415 AARNESAQITMQHFEAAIDRVIGGLEKKNK 444
A R + + FE A VI E++++
Sbjct: 386 AVRENRYIVLAKDFEKAYKTVIKKDEQEHE 415
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 433 (157.5 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 97/255 (38%), Positives = 143/255 (56%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I + + K + D+ G D KQE+ E V L + Y+++G P+G LL GPP
Sbjct: 134 SSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPP 193
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
GTGKT+LAKA A + F+ + GS+F++ ++G GP VR +F+ AR+ +P+I+FIDEID
Sbjct: 194 GTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEID 253
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF + V V+ TNR D LD ALLRPGR
Sbjct: 254 AIATKRFDAQTGADR-EVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRL 312
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD + + IFQ+ K+ L +E + + +GA+I ++C EA +
Sbjct: 313 DRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDL--EDYVSRPDKLSGAEIQSICQEAGMH 370
Query: 415 AARNESAQITMQHFE 429
A R I + FE
Sbjct: 371 AIRKNRYVILPKDFE 385
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 450 (163.5 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 101/256 (39%), Positives = 143/256 (55%)
Query: 188 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 246
KV + D+ G +E K++++E V L+ ++ LG PKG LL GPPG KTL AKA A
Sbjct: 495 KVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALA 554
Query: 247 GESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXX 306
ESG+ FL++ G + +VG +R +F++AR +PSI+F DEIDAI
Sbjct: 555 TESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIAGDRDGDSST 614
Query: 307 XXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 366
+ L LL E+DG GVV++ TN+P +D ALLRPGR DR I + PD
Sbjct: 615 TA---ASNVLTSLLNEIDGVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYD 671
Query: 367 GRDQIFQIYLKKLKLDN-EPSFYSQRLAALTPGFAGADIANVCNEAALIAA--RNESAQI 423
R QI Q +K L + + S Q+LA LT G +GA++ +C EA L A E+ +
Sbjct: 672 ARLQILQKCSRKFNLQSGDESVDLQKLAELTDGCSGAEVTLLCQEAGLAAIMENKEATTV 731
Query: 424 TMQHFEAAIDRVIGGL 439
T +HFE A+ + G+
Sbjct: 732 TNKHFEHALKGISRGI 747
Score = 354 (129.7 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 82/263 (31%), Positives = 137/263 (52%)
Query: 184 NAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLA 242
N ++ + V G + + + + L NP + + G P+G LL GPPGTGKT+L
Sbjct: 221 NLPQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLL 280
Query: 243 KATAGE-SGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXX 301
+ A + L+++G + ++G + +R +F EA++ PSI+F+DEID+I
Sbjct: 281 RCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRT 340
Query: 302 XXXXXXXNDERES-TLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITI 360
+ E ES + QLL MDG G +VV+ TNRP+ +D AL RPGRFD+++ I
Sbjct: 341 SDD----SGETESRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEI 396
Query: 361 DKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAAL---TPGFAGADIANVCNEAALIAA- 416
PD++ R++I K+ + + + +A++ T G+ GAD+ +C E+ + A
Sbjct: 397 GIPDVEAREEILTKQFAKMNSE-KCQITKEEIASIASKTHGYVGADLTALCRESVMKAIN 455
Query: 417 RNESAQITMQHFEAAIDRVIGGL 439
R + I + +D V L
Sbjct: 456 RGLTVGIPQTAIKVTVDDVYHAL 478
Score = 40 (19.1 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 45 IVVTNKSVAKVFVKSTPRSTNETND 69
+ NKSVA V++ S E N+
Sbjct: 39 VPTNNKSVANVYINPEILSAMELNN 63
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 453 (164.5 bits), Expect = 2.4e-40, P = 2.4e-40
Identities = 102/250 (40%), Positives = 140/250 (56%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
V + D+ G + K ++ + V + LK+PK + +G + PKG LL GPPG KT++AKA A
Sbjct: 624 VSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALAN 683
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
ESG+ FL++ G + M +VG VR +F++AR APSI+F DE+DA+
Sbjct: 684 ESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAG 743
Query: 308 XNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 367
+R L QLL EMDG V VLA TNRPD +DKAL+RPGR DR I + PD
Sbjct: 744 NVADR--VLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAAT 801
Query: 368 RDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAAR-NESAQITMQ 426
R +I + + + NE L T ++GA+I VC EAAL+A N A M+
Sbjct: 802 RREILNLQFHSMPISNEVDL--DELVLQTDTYSGAEIIAVCKEAALLALEENIKADCIMK 859
Query: 427 -HFEAAIDRV 435
HF A+ V
Sbjct: 860 RHFTQALSIV 869
Score = 366 (133.9 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 90/251 (35%), Positives = 134/251 (53%)
Query: 172 NIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALL 230
N+ K + +++ KV + + G + + I E + LK P+ ++ G P+G LL
Sbjct: 333 NLRKICTNSKEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLL 392
Query: 231 VGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFI 290
GPPGTGKT++A+A A E G ++G + + F G +R+R +F EA PSI+FI
Sbjct: 393 YGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFI 452
Query: 291 DEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAG---VVVLAGTNRPDILDKA 347
DE+DA+ ++ + + LL MDG G+ V+VL TNRP LD A
Sbjct: 453 DELDALCPKREGAQ----SEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAA 508
Query: 348 LLRPGRFDRQITIDKPDIKGRDQIFQIYLKKLK-LDNEPSFYSQRLAALTPGFAGADIAN 406
L RPGRFD++I I P+ + R I Q L+++ L + RLA G+ GAD+
Sbjct: 509 LRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELL--RLANNAHGYVGADLKA 566
Query: 407 VCNEAALIAAR 417
+CNEA L A R
Sbjct: 567 LCNEAGLHALR 577
Score = 37 (18.1 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 15/51 (29%), Positives = 21/51 (41%)
Query: 436 IGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAA 486
I G E NK + + ER AVA + E L V RG+++
Sbjct: 692 IKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDE--LDALAVERGSSS 740
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 451 (163.8 bits), Expect = 2.8e-40, P = 2.8e-40
Identities = 99/251 (39%), Positives = 145/251 (57%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
V + D+ G E + + + + + L + K++ LG K P+G L+ GPPG KT++AKA A
Sbjct: 532 VQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALAT 591
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
ES + FLS+ G + M+VG VR +F++ARQ AP+IVF DEIDAI
Sbjct: 592 ESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSS 651
Query: 308 XNDE-RESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 366
+E L QLL E+DG V ++A TNRPD++DKALLRPGR DR + + P +
Sbjct: 652 SGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCE 711
Query: 367 GRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARN--ESAQIT 424
R +I +I L+ + + N+ ++L LT G++GA+I VC+EAAL A E+ +
Sbjct: 712 ARREILKIKLRAMPISNDVDM--EKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAEDVK 769
Query: 425 MQHFEAAIDRV 435
FE A+ V
Sbjct: 770 WTDFEHALKAV 780
Score = 156 (60.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 57/253 (22%), Positives = 116/253 (45%)
Query: 194 VAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG------ 247
+ G D Q + E + + + G ++ +G LL G G GK+++ +A
Sbjct: 274 IGGLDRQLQLVEESMEYALGFRTLPA-GLRVSRGLLLYGATGCGKSMVLEAMCAVAEERS 332
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEA--RQCAPSIVFIDEIDAIX-XXXXXXX 304
+ V + ++ + F+G ++ ++F+ A P+++ I+++ +
Sbjct: 333 QGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQENSDL 392
Query: 305 XXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPD 364
+ S L+QL G+ VLA +++ D L ++ R GR D ++ + P
Sbjct: 393 VKRVSLAFLSLLDQLSSPSQLKGSKT--FVLATSSQIDTLHPSIRRAGRLDNEVELGAPS 450
Query: 365 IKGRDQIFQIYLKKLK--LDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQ 422
+ R +I + +K ++ L +E + +A++T G+ GAD+AN+ A L A N
Sbjct: 451 SQARLEIVRCLIKSVEHQLSDEEV---EHVASITHGYVGADLANLVYAAMLQAQPNP--- 504
Query: 423 ITMQHFEAAIDRV 435
+ M H +AA+ R+
Sbjct: 505 LQMPHLQAALTRI 517
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 431 (156.8 bits), Expect = 3.2e-40, P = 3.2e-40
Identities = 91/236 (38%), Positives = 135/236 (57%)
Query: 188 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 246
+V ++D+ G ++ K+E+ E V + +++P K+ + G KG L GPPG GKTLLAKA A
Sbjct: 205 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 264
Query: 247 GESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXX 306
E F+S+ G + + M+ G + VR +F +ARQ AP ++F DE+D+I
Sbjct: 265 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD 324
Query: 307 XXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 366
+ +NQ+L EMDG T V ++ TNRPDI+D A+LRPGR D+ I I PD K
Sbjct: 325 GGG-AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 383
Query: 367 GRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQ 422
R I + L+K + + LA +T GF+GAD+ +C A +A R ES +
Sbjct: 384 SRVAILKANLRKSPVAKDVDL--DFLAKMTNGFSGADLTEICQRACKLAIR-ESIE 436
Score = 288 (106.4 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 69/170 (40%), Positives = 98/170 (57%)
Query: 257 SGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXNDERESTL 316
SG + M G S +R F+EA + AP+I+FIDE+DAI ER +
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEV---ERR-IV 57
Query: 317 NQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYL 376
+QLL MDG A V+V+A TNRP+ +D AL R GRFDR++ I PD GR +I QI+
Sbjct: 58 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT 117
Query: 377 KKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQ 426
K +KL ++ +++ T G GAD+A +C+EAAL A R + I ++
Sbjct: 118 KNMKLADDVDL--EQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLE 165
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 431 (156.8 bits), Expect = 3.2e-40, P = 3.2e-40
Identities = 96/255 (37%), Positives = 141/255 (55%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I+ + + K V + D+ G D KQEI E V L + + Y+++G P+G L+ GPP
Sbjct: 144 SSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPP 203
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
G GKT+LAKA A + F+ + GS+F++ ++G GP VR +F+ A++ AP+I+FIDEID
Sbjct: 204 GCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID 263
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF T V V+ TNR D LD ALLRPGR
Sbjct: 264 AIATKRFDAQTGADR-EVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRL 322
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD + + +F K+ L + + A +GADI +C EA +
Sbjct: 323 DRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDL--EEFVARPDKISGADINAICQEAGMH 380
Query: 415 AARNESAQITMQHFE 429
A R + + FE
Sbjct: 381 AVRENRYIVLAKDFE 395
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 430 (156.4 bits), Expect = 4.3e-40, P = 4.3e-40
Identities = 95/270 (35%), Positives = 156/270 (57%)
Query: 178 ITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGT 236
+ M+++ K + D+ G + +E+ E + ++ K+ +LG K PKG L+ GPPGT
Sbjct: 171 VKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGT 230
Query: 237 GKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAI 296
GKTLLA+A A +S FL ++ ++MF+G G VR F A++ +P+I+FIDE+DAI
Sbjct: 231 GKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAI 290
Query: 297 XXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 356
E + T+ +LL ++DGF + V V+A TNR D LD ALLR GR DR
Sbjct: 291 GTKRFDSEKAGDR-EVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDR 349
Query: 357 QITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAA 416
++ P+ + R I +I+ +K+ +D++ ++ + LA T + GA + +VC EA +IA
Sbjct: 350 KLEFPLPNEEARVGILRIHSRKMAIDDDINW--EELARSTDEYNGAMLKSVCVEAGMIAL 407
Query: 417 RNESAQITMQHFEAAIDRVIGGLEKKNKVI 446
R +I +HF +D ++ +K+K +
Sbjct: 408 RQGDTKINHEHF---MDGILEVQMRKSKTL 434
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 449 (163.1 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 96/241 (39%), Positives = 143/241 (59%)
Query: 187 DKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKAT 245
++V + D+ GC + +I E V L++P ++ +G K P+G LL GPPGTGKTL+A+A
Sbjct: 199 NEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAV 258
Query: 246 AGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXX 305
A E+G F ++G + M G S +R F+E + AP+I+FIDE+DAI
Sbjct: 259 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPSP 318
Query: 306 XXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDI 365
+ ++QLL MDG A V+V+A TNRP+ +D AL R GRFDR++ I PD
Sbjct: 319 QTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDA 378
Query: 366 KGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITM 425
GR +I QI+ K +KL ++ +++A T G GAD+A +C+EAAL A R + I +
Sbjct: 379 TGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL 436
Query: 426 Q 426
+
Sbjct: 437 E 437
Score = 431 (156.8 bits), Expect = 7.3e-38, P = 7.3e-38
Identities = 91/236 (38%), Positives = 135/236 (57%)
Query: 188 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 246
+V ++D+ G ++ K+E+ E V + +++P K+ + G KG L GPPG GKTLLAKA A
Sbjct: 477 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 536
Query: 247 GESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXX 306
E F+S+ G + + M+ G + VR +F +ARQ AP ++F DE+D+I
Sbjct: 537 NECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD 596
Query: 307 XXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 366
+ +NQ+L EMDG T V ++ TNRPDI+D A+LRPGR D+ I I PD K
Sbjct: 597 GGG-AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEK 655
Query: 367 GRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQ 422
R I + L+K + + LA +T GF+GAD+ +C A +A R ES +
Sbjct: 656 SRVAILKANLRKSPVAKDVDL--DFLAKMTNGFSGADLTEICQRACKLAIR-ESIE 708
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 429 (156.1 bits), Expect = 5.5e-40, P = 5.5e-40
Identities = 96/249 (38%), Positives = 135/249 (54%)
Query: 188 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 246
++ F + G E +E+ E + LKNP+ + +G K PKG LL GPPGTGKTLLAKA A
Sbjct: 168 EISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVA 227
Query: 247 GESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXX 306
G F+ S ++ ++G +R +F A++ P I+F+DE+DAI
Sbjct: 228 ATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTS 287
Query: 307 XXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 366
E + TL +LL +MDGF T ++ TNRPD LD ALLR GR DR+I I P+
Sbjct: 288 ADR-EIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEA 346
Query: 367 GRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQ 426
GR +IF+I+ K+ E F + ++ GF GADI NV EA A R++ I
Sbjct: 347 GRLEIFKIHTSKVAKQGEFDF--EAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQN 404
Query: 427 HFEAAIDRV 435
A+ +V
Sbjct: 405 DLMKAVRKV 413
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 449 (163.1 bits), Expect = 8.0e-40, Sum P(2) = 8.0e-40
Identities = 101/252 (40%), Positives = 151/252 (59%)
Query: 184 NAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLA 242
N ++V + D+ GC + +I E V L++P+ ++ +G K P+G LL GPPGTGKTL+A
Sbjct: 214 NNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMA 273
Query: 243 KATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXX 302
+A A E+G F ++G + M G S +R F+EA + +P+I+FIDEID+I
Sbjct: 274 RAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK 333
Query: 303 XXXXXXNDERES-TLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITID 361
N E E ++QLL MDG + VVV+A TNRP+ +D AL R GRFDR++ I
Sbjct: 334 T-----NGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIG 388
Query: 362 KPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESA 421
PD GR +I QI+ K +KL ++ +++AA T G+ G+D+A +C+EAA+ R +
Sbjct: 389 IPDPTGRLEILQIHTKNMKLGDDVDL--EQIAAETHGYVGSDVAALCSEAAMQQIREKMD 446
Query: 422 QITMQHFEAAID 433
I + E ID
Sbjct: 447 LIDLD--EDTID 456
Score = 414 (150.8 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 94/246 (38%), Positives = 136/246 (55%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
V ++D+ G DE KQ++ E V + + +P+K+ + G +G L GPPGTGKT+LAKA A
Sbjct: 493 VRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 552
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
E F+S+ G + + M+ G S +R +F +AR AP IVF+DE+D+I
Sbjct: 553 ECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDA 612
Query: 308 XNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 367
+ +NQLL EMDG + V V+ TNRP+ LD AL RPGR D I + PD G
Sbjct: 613 GGAS-DRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELG 671
Query: 368 RDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNE-SAQITM- 425
R I + L+K + ++ Q +A T GF+GAD+ + A IA + +A I
Sbjct: 672 RLSILKAQLRKTPVSDDVDL--QYIANKTHGFSGADLGFITQRAVKIAIKESITADINRT 729
Query: 426 QHFEAA 431
+ EAA
Sbjct: 730 KALEAA 735
Score = 38 (18.4 bits), Expect = 8.0e-40, Sum P(2) = 8.0e-40
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 416 ARNESAQITMQHFEAAIDRVIGGLEKKNKVISKLE-RRTVAY-HESGHAVAGWFLEHAE 472
A + ++T +HFE A +++ K +S +E RR A+ + +A G F + E
Sbjct: 745 AEDPVPELTKRHFEEA-------MQQARKSVSDVEIRRYEAFAQQMKNAGPGAFFKFPE 796
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 427 (155.4 bits), Expect = 9.4e-40, P = 9.4e-40
Identities = 93/262 (35%), Positives = 144/262 (54%)
Query: 176 ATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPP 234
++I + + K + + D+ G D KQE+ E V L + + Y+++G P+G L+ GPP
Sbjct: 145 SSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPP 204
Query: 235 GTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEID 294
G GKT+LAKA A + F+ + GS+F++ ++G GP VR +F+ A++ +PSI+FIDEID
Sbjct: 205 GCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEID 264
Query: 295 AIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRF 354
AI E + L +LL +MDGF + V V+ TNR D LD ALLRPGR
Sbjct: 265 AIATKRFDAQTGADR-EVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRL 323
Query: 355 DRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALI 414
DR+I PD + + +F ++ L ++ + A +GADI ++C EA +
Sbjct: 324 DRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDL--EDWVARPDKISGADINSICQEAGMQ 381
Query: 415 AARNESAQITMQHFEAAIDRVI 436
A R + + E A V+
Sbjct: 382 AVRENRYVVLTKDLEKAYKNVV 403
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 446 (162.1 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 100/237 (42%), Positives = 142/237 (59%)
Query: 191 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 249
+ D+ GC + +I E V L++P ++ +G K P+G LL GPPGTGKTL+A+A A E+
Sbjct: 205 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVANET 264
Query: 250 GVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXXXN 309
G F ++G + M G S +R F+EA + AP+I+FIDE+DAI
Sbjct: 265 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEV-- 322
Query: 310 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 369
ER ++QLL MDG A VVV+A TNRP+ +D AL R GRFDR+I I PD GR
Sbjct: 323 -ERR-IVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRL 380
Query: 370 QIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNESAQITMQ 426
+I QI+ K +KL + ++++A T G GAD+A +C+EAAL A R + I ++
Sbjct: 381 EILQIHTKNMKLSEDVDL--EQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLE 435
Score = 422 (153.6 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 88/230 (38%), Positives = 129/230 (56%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
V ++D+ G DE K+E+ E V + ++ P K+ + G +G L GPPG GKTLLAKA A
Sbjct: 476 VNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIAN 535
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
E F+S+ G + + M+ G + VR +F +ARQ AP I+F DE+D+I
Sbjct: 536 ECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDA 595
Query: 308 XNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 367
+ +NQ+L EMDG V ++ TNRPDI+D A+LRPGR D+ I I PD+
Sbjct: 596 GG-AADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPS 654
Query: 368 RDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAAR 417
R I + L+K + + L+ +T GF+GAD+ +C A +A R
Sbjct: 655 RTAILRANLRKSPVAKDVDL--MYLSKITEGFSGADLTEICQRACKLAIR 702
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 447 (162.4 bits), Expect = 1.3e-39, P = 1.3e-39
Identities = 98/256 (38%), Positives = 144/256 (56%)
Query: 189 VFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG 247
V + D+ G + K ++ + V + LK+P+ + +G + PKG LL GPPG KT++AKA A
Sbjct: 624 VSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALAN 683
Query: 248 ESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXXX 307
ESG+ FL++ G + M +VG VR +F++AR +PSI+F DE+DA+
Sbjct: 684 ESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFDELDALAIERGSSSGAG 743
Query: 308 XNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKG 367
+R L QLL EMDG V +LA TNRPD +DKAL+RPGR DR I + PD
Sbjct: 744 NVADR--VLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAAT 801
Query: 368 RDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARNE--SAQITM 425
R +I + + + N+ + L T ++GA+I VC EAAL+A + + IT
Sbjct: 802 RREILNLQFHSMPISNDVNL--DELIFQTDTYSGAEIIAVCREAALLALEEDIQANSITR 859
Query: 426 QHFEAAIDRVIGGLEK 441
+HF A+ V + K
Sbjct: 860 RHFTRALSTVTPRISK 875
Score = 359 (131.4 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 89/235 (37%), Positives = 125/235 (53%)
Query: 188 KVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATA 246
KV + + G + I E + LK P+ ++ G P+G LL GPPGTGKT++A+A A
Sbjct: 349 KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 408
Query: 247 GESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIVFIDEIDAIXXXXXXXXXX 306
E G ++G + + F G +R+R +F EA PSI+FIDE+DA+
Sbjct: 409 NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQ-- 466
Query: 307 XXNDERESTLNQLLVEMDGFGTTAG---VVVLAGTNRPDILDKALLRPGRFDRQITIDKP 363
N+ + + LL MDG G+ V+VL TNRP LD AL RPGRFD++I I P
Sbjct: 467 --NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVP 524
Query: 364 DIKGRDQIFQIYLKKLK-LDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAAR 417
+ R I Q L+++ L E +LA G+ GAD+ +CNEA L A R
Sbjct: 525 NAADRLDILQKLLQRVPHLLTEVELL--QLANSAHGYVGADLKALCNEAGLYALR 577
Score = 37 (18.1 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 466 WFLEHAEPLLKVTIVP-RGTAALG 488
W L+H E +++ I P +G G
Sbjct: 645 WPLKHPESFIRMGIQPPKGVLLYG 668
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 424 (154.3 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 98/277 (35%), Positives = 150/277 (54%)
Query: 170 IFNIGKATITKMDMNAKDKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGA 228
+FN+ + I K + N+ +KV + + G E +++ E V + NP Y+ +G K PKG
Sbjct: 117 VFNM-ISDIDKSE-NSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGV 174
Query: 229 LLVGPPGTGKTLLAKATAGESGVPFLSMSGSDFMEMFVGVGPSRVRSLFQEARQCAPSIV 288
LL GPPGTGKTLLA+A A F+ + S ++ ++G +R +F A++ P I+
Sbjct: 175 LLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCII 234
Query: 289 FIDEIDAIXXXXXXXXXXXXNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKAL 348
F+DEIDAI E + TL +LL +DGF V ++ TNRPD+LD AL
Sbjct: 235 FMDEIDAIGGRRFSQGTSADR-EIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPAL 293
Query: 349 LRPGRFDRQITIDKPDIKGRDQIFQIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVC 408
+RPGR DR+I I P+ R +I +I+ K+ + + S + L GF GAD+ NVC
Sbjct: 294 VRPGRLDRKIEIPLPNETARIEILKIHANKMTKLGDIDYES--VCRLCDGFNGADLRNVC 351
Query: 409 NEAALIAARNESAQITMQHFEAAIDRVIGGLEKKNKV 445
EA + A R + + F A ++ G + + K+
Sbjct: 352 TEAGMFAIRAMRDYVIEEDFYKAARKISEGKKLEGKI 388
WARNING: HSPs involving 463 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 680 654 0.00096 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 713
No. of states in DFA: 616 (65 KB)
Total size of DFA: 331 KB (2169 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 59.78u 0.08s 59.86t Elapsed: 00:00:17
Total cpu time: 59.87u 0.08s 59.95t Elapsed: 00:00:18
Start: Fri May 10 01:01:20 2013 End: Fri May 10 01:01:38 2013
WARNINGS ISSUED: 2