Query 005740
Match_columns 680
No_of_seqs 406 out of 2731
Neff 7.3
Searched_HMMs 13730
Date Mon Mar 25 06:08:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005740.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005740hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2hyda1 c.37.1.12 (A:324-578) 100.0 1.9E-77 1.4E-81 612.1 28.7 242 429-676 11-254 (255)
2 d2pmka1 c.37.1.12 (A:467-707) 100.0 1.8E-76 1.3E-80 600.4 30.6 238 434-677 1-241 (241)
3 d3b60a1 c.37.1.12 (A:329-581) 100.0 3.3E-76 2.4E-80 603.6 30.0 243 429-676 8-252 (253)
4 d1jj7a_ c.37.1.12 (A:) Peptide 100.0 4.9E-75 3.6E-79 594.2 29.2 242 430-673 7-250 (251)
5 d1mv5a_ c.37.1.12 (A:) Multidr 100.0 9.7E-75 7.1E-79 588.9 19.6 236 435-676 2-239 (242)
6 d1r0wa_ c.37.1.12 (A:) Cystic 100.0 3.6E-61 2.6E-65 499.2 16.7 219 432-673 36-256 (281)
7 d3d31a2 c.37.1.12 (A:1-229) Su 100.0 2.3E-56 1.7E-60 446.7 21.9 213 435-664 2-218 (229)
8 d2awna2 c.37.1.12 (A:4-235) Ma 100.0 2.2E-56 1.6E-60 448.2 21.6 218 435-668 1-226 (232)
9 d1v43a3 c.37.1.12 (A:7-245) Hy 100.0 5.8E-56 4.2E-60 446.6 21.5 220 433-668 5-232 (239)
10 d1oxxk2 c.37.1.12 (K:1-242) Gl 100.0 1.9E-56 1.4E-60 450.5 17.1 219 434-664 3-231 (242)
11 d1l2ta_ c.37.1.12 (A:) MJ0796 100.0 8.6E-56 6.2E-60 443.7 19.8 213 435-658 2-229 (230)
12 d3dhwc1 c.37.1.12 (C:1-240) Me 100.0 8.8E-56 6.4E-60 446.0 19.2 219 435-664 2-231 (240)
13 d1g2912 c.37.1.12 (1:1-240) Ma 100.0 6E-56 4.3E-60 447.2 18.0 221 434-668 3-235 (240)
14 d1b0ua_ c.37.1.12 (A:) ATP-bin 100.0 3.6E-53 2.6E-57 433.1 21.3 226 434-674 2-251 (258)
15 d1ji0a_ c.37.1.12 (A:) Branche 100.0 3E-52 2.2E-56 422.5 24.7 221 434-664 6-229 (240)
16 d1g6ha_ c.37.1.12 (A:) MJ1267 100.0 1.1E-51 7.9E-56 422.3 20.8 219 434-663 4-239 (254)
17 d1vpla_ c.37.1.12 (A:) Putativ 100.0 2.6E-51 1.9E-55 414.8 22.4 216 433-664 1-223 (238)
18 d2onka1 c.37.1.12 (A:1-240) Mo 100.0 4.8E-51 3.5E-55 410.0 21.1 217 435-672 3-226 (240)
19 d1l7vc_ c.37.1.12 (C:) ABC tra 100.0 1.2E-47 8.9E-52 386.9 17.0 211 435-665 4-223 (231)
20 d1sgwa_ c.37.1.12 (A:) Putativ 100.0 3.6E-44 2.7E-48 353.8 18.1 192 434-649 2-197 (200)
21 d3b60a2 f.37.1.1 (A:10-328) Mu 100.0 4E-30 2.9E-34 265.3 40.2 302 117-418 1-318 (319)
22 d2hyda2 f.37.1.1 (A:1-323) Put 100.0 4.9E-29 3.6E-33 257.8 36.8 299 120-418 2-323 (323)
23 g1f2t.1 c.37.1.12 (A:,B:) Rad5 99.8 1.2E-20 8.8E-25 192.8 17.5 79 572-653 201-287 (292)
24 d1ye8a1 c.37.1.11 (A:1-178) Hy 99.8 1.9E-21 1.4E-25 185.2 1.0 173 465-673 2-174 (178)
25 d1w1wa_ c.37.1.12 (A:) Smc hea 99.3 1.9E-12 1.4E-16 138.3 10.1 73 572-647 332-408 (427)
26 g1ii8.1 c.37.1.12 (A:,B:) Rad5 99.2 2.2E-11 1.6E-15 125.0 10.3 76 572-650 278-361 (369)
27 d1e69a_ c.37.1.12 (A:) Smc hea 99.2 1.1E-10 7.7E-15 119.6 13.9 75 572-650 219-299 (308)
28 g1xew.1 c.37.1.12 (X:,Y:) Smc 98.9 7.9E-09 5.8E-13 106.3 16.9 72 572-647 224-299 (329)
29 d2i3ba1 c.37.1.11 (A:1-189) Ca 97.7 3.2E-07 2.4E-11 84.7 -6.8 136 464-601 2-145 (189)
30 d1znwa1 c.37.1.1 (A:20-201) Gu 97.4 1.2E-05 9E-10 74.9 1.0 66 463-531 2-77 (182)
31 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.4 2.1E-05 1.6E-09 71.8 1.5 26 462-487 3-28 (176)
32 d2bdta1 c.37.1.25 (A:1-176) Hy 97.3 6.8E-05 4.9E-09 67.8 4.4 32 464-498 3-34 (176)
33 d1cr2a_ c.37.1.11 (A:) Gene 4 97.2 0.00061 4.5E-08 67.1 10.4 35 451-485 23-57 (277)
34 d1m8pa3 c.37.1.15 (A:391-573) 97.2 7.2E-05 5.2E-09 68.1 3.0 27 461-487 4-30 (183)
35 d1np6a_ c.37.1.10 (A:) Molybdo 97.2 4.8E-05 3.5E-09 68.9 1.7 27 465-491 4-30 (170)
36 d1u0la2 c.37.1.8 (A:69-293) Pr 97.1 0.00014 1.1E-08 70.0 4.1 33 462-494 94-126 (225)
37 d1nlfa_ c.37.1.11 (A:) Hexamer 97.1 0.00078 5.7E-08 66.0 9.7 45 587-633 129-178 (274)
38 d1g6oa_ c.37.1.11 (A:) Hexamer 97.0 0.00025 1.9E-08 72.2 5.6 56 460-517 163-218 (323)
39 d1yj5a2 c.37.1.1 (A:351-522) 5 97.0 0.00033 2.4E-08 64.6 5.5 87 461-596 12-99 (172)
40 d1lw7a2 c.37.1.1 (A:220-411) T 96.9 0.00014 1E-08 66.3 2.5 24 464-487 8-31 (192)
41 d1s96a_ c.37.1.1 (A:) Guanylat 96.9 0.00014 1E-08 69.2 2.3 67 462-534 1-81 (205)
42 d1y63a_ c.37.1.1 (A:) Probable 96.9 0.00019 1.4E-08 65.0 3.1 28 461-488 3-30 (174)
43 d1tf7a2 c.37.1.11 (A:256-497) 96.9 0.0011 8E-08 63.6 8.5 32 453-485 15-48 (242)
44 d1x6va3 c.37.1.4 (A:34-228) Ad 96.8 0.00015 1.1E-08 67.1 1.8 26 462-487 18-43 (195)
45 d1khta_ c.37.1.1 (A:) Adenylat 96.8 0.00018 1.3E-08 65.7 2.3 31 463-493 1-31 (190)
46 d1knqa_ c.37.1.17 (A:) Glucona 96.8 0.00023 1.7E-08 64.4 3.0 27 461-487 4-30 (171)
47 d1qhxa_ c.37.1.3 (A:) Chloramp 96.8 0.00028 2E-08 63.8 3.5 26 463-488 3-28 (178)
48 d1gkya_ c.37.1.1 (A:) Guanylat 96.8 0.00014 1E-08 67.9 1.4 60 466-530 4-76 (186)
49 d1kaga_ c.37.1.2 (A:) Shikimat 96.8 0.00025 1.8E-08 63.1 2.9 24 464-487 3-26 (169)
50 d1rz3a_ c.37.1.6 (A:) Hypothet 96.7 0.00027 2E-08 65.3 2.9 24 465-488 24-47 (198)
51 d1ly1a_ c.37.1.1 (A:) Polynucl 96.7 0.00031 2.2E-08 62.4 3.0 32 464-498 3-34 (152)
52 d1rkba_ c.37.1.1 (A:) Adenylat 96.7 0.0003 2.2E-08 63.4 2.8 23 465-487 6-28 (173)
53 g1ii8.1 c.37.1.12 (A:,B:) Rad5 96.7 0.0004 2.9E-08 69.3 3.7 32 452-484 13-44 (369)
54 d1r7ra3 c.37.1.20 (A:471-735) 96.7 0.0018 1.3E-07 63.8 8.3 30 459-488 37-66 (265)
55 d1xjca_ c.37.1.10 (A:) Molybdo 96.6 0.00027 2E-08 64.2 2.0 37 464-500 2-41 (165)
56 d1t9ha2 c.37.1.8 (A:68-298) Pr 96.6 0.00019 1.3E-08 69.4 0.8 34 462-495 96-129 (231)
57 d1ak2a1 c.37.1.1 (A:14-146,A:1 96.6 0.0005 3.7E-08 63.8 3.6 33 461-497 1-33 (190)
58 d1lv7a_ c.37.1.20 (A:) AAA dom 96.6 0.002 1.4E-07 63.2 8.1 29 460-488 42-70 (256)
59 d1mkya2 c.37.1.8 (A:173-358) P 96.5 0.00077 5.6E-08 62.0 4.3 41 465-505 10-62 (186)
60 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.5 0.00053 3.8E-08 63.8 3.0 31 463-497 6-36 (194)
61 d1kgda_ c.37.1.1 (A:) Guanylat 96.4 0.00062 4.5E-08 63.1 3.0 76 463-548 3-91 (178)
62 d1ukza_ c.37.1.1 (A:) Uridylat 96.4 0.00063 4.6E-08 63.4 3.1 115 463-598 8-122 (196)
63 d1sxje2 c.37.1.20 (E:4-255) Re 96.4 0.0024 1.7E-07 61.4 7.3 42 590-636 131-172 (252)
64 d1qhla_ c.37.1.12 (A:) Cell di 96.4 0.00011 8.2E-09 67.7 -2.6 33 453-486 15-47 (222)
65 d1uj2a_ c.37.1.6 (A:) Uridine- 96.4 0.00075 5.5E-08 63.8 3.2 45 465-523 4-48 (213)
66 d1svia_ c.37.1.8 (A:) Probable 96.3 0.00079 5.7E-08 62.6 2.7 22 465-486 25-46 (195)
67 d1m7ga_ c.37.1.4 (A:) Adenosin 96.2 0.00033 2.4E-08 66.7 -0.3 43 461-503 22-66 (208)
68 d1ixza_ c.37.1.20 (A:) AAA dom 96.2 0.0046 3.4E-07 60.1 8.2 23 465-487 44-66 (247)
69 d1e6ca_ c.37.1.2 (A:) Shikimat 96.2 0.001 7.5E-08 60.6 3.0 24 464-487 3-26 (170)
70 d1viaa_ c.37.1.2 (A:) Shikimat 96.1 0.0011 8.2E-08 59.9 2.9 29 465-497 2-30 (161)
71 d1lvga_ c.37.1.1 (A:) Guanylat 96.1 0.0011 8.3E-08 61.7 3.0 45 466-512 3-60 (190)
72 d2cxxa1 c.37.1.8 (A:2-185) GTP 96.1 0.0011 8.1E-08 60.6 2.7 22 465-486 2-23 (184)
73 d3adka_ c.37.1.1 (A:) Adenylat 96.0 0.00075 5.5E-08 62.9 1.3 117 460-599 5-121 (194)
74 d1mkya1 c.37.1.8 (A:2-172) Pro 96.0 0.0015 1.1E-07 59.2 3.3 22 465-486 2-23 (171)
75 d1zina1 c.37.1.1 (A:1-125,A:16 96.0 0.0015 1.1E-07 59.6 3.2 23 465-487 2-24 (182)
76 d1wb9a2 c.37.1.12 (A:567-800) 96.0 0.018 1.3E-06 55.2 11.3 47 589-637 119-166 (234)
77 d1teva_ c.37.1.1 (A:) UMP/CMP 96.0 0.0015 1.1E-07 60.4 3.3 70 465-550 3-72 (194)
78 d1ewqa2 c.37.1.12 (A:542-765) 96.0 0.022 1.6E-06 54.2 11.7 48 589-639 113-161 (224)
79 d1bifa1 c.37.1.7 (A:37-249) 6- 95.9 0.0016 1.1E-07 60.7 3.1 42 465-513 4-45 (213)
80 d1p5zb_ c.37.1.1 (B:) Deoxycyt 95.9 0.0011 8E-08 63.4 2.0 27 462-488 1-27 (241)
81 d1q3ta_ c.37.1.1 (A:) CMP kina 95.9 0.0016 1.2E-07 61.4 3.2 24 465-488 5-28 (223)
82 d2erxa1 c.37.1.8 (A:6-176) di- 95.9 0.0036 2.6E-07 56.5 5.5 29 465-493 4-37 (171)
83 d1lnza2 c.37.1.8 (A:158-342) O 95.9 0.0011 8.3E-08 60.8 2.0 22 465-486 3-24 (185)
84 d1s3ga1 c.37.1.1 (A:1-125,A:16 95.9 0.0018 1.3E-07 59.4 3.2 23 465-487 2-24 (182)
85 d1upta_ c.37.1.8 (A:) ADP-ribo 95.9 0.0018 1.3E-07 57.7 3.1 42 574-617 122-163 (169)
86 d1r8sa_ c.37.1.8 (A:) ADP-ribo 95.9 0.0018 1.3E-07 57.3 3.1 21 465-485 2-22 (160)
87 d1wf3a1 c.37.1.8 (A:3-180) GTP 95.9 0.0019 1.4E-07 59.0 3.3 22 465-486 7-28 (178)
88 d1n0wa_ c.37.1.11 (A:) DNA rep 95.8 0.0025 1.8E-07 58.8 4.0 26 460-485 20-45 (242)
89 d1uf9a_ c.37.1.1 (A:) Dephosph 95.8 0.0017 1.2E-07 60.0 2.8 22 465-486 5-26 (191)
90 d1zaka1 c.37.1.1 (A:3-127,A:15 95.8 0.0015 1.1E-07 60.4 2.4 23 465-487 5-27 (189)
91 d2gj8a1 c.37.1.8 (A:216-376) P 95.8 0.0019 1.4E-07 57.7 3.0 76 574-654 64-141 (161)
92 d1nrjb_ c.37.1.8 (B:) Signal r 95.8 0.0019 1.4E-07 60.2 3.1 22 465-486 5-26 (209)
93 d1nksa_ c.37.1.1 (A:) Adenylat 95.8 0.0012 8.9E-08 60.1 1.6 25 464-488 2-26 (194)
94 d1ckea_ c.37.1.1 (A:) CMP kina 95.8 0.0021 1.5E-07 60.4 3.2 24 465-488 5-28 (225)
95 d2iyva1 c.37.1.2 (A:2-166) Shi 95.8 0.0018 1.3E-07 58.6 2.6 23 465-487 3-25 (165)
96 d2qtvb1 c.37.1.8 (B:24-189) SA 95.7 0.0022 1.6E-07 56.6 3.1 22 465-486 2-23 (166)
97 d1udxa2 c.37.1.8 (A:157-336) O 95.7 0.0015 1.1E-07 59.7 2.0 21 466-486 4-24 (180)
98 d1sq5a_ c.37.1.6 (A:) Pantothe 95.7 0.0014 9.9E-08 66.1 1.6 48 465-529 82-129 (308)
99 d1egaa1 c.37.1.8 (A:4-182) GTP 95.7 0.0024 1.7E-07 58.0 3.2 21 465-485 7-27 (179)
100 d1xtqa1 c.37.1.8 (A:3-169) GTP 95.6 0.0045 3.3E-07 55.7 4.8 37 464-500 5-51 (167)
101 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 95.6 0.0019 1.4E-07 58.5 2.2 25 463-487 13-37 (186)
102 d1e4va1 c.37.1.1 (A:1-121,A:15 95.6 0.0024 1.8E-07 58.3 2.8 23 465-487 2-24 (179)
103 d1yrba1 c.37.1.10 (A:1-244) AT 95.6 0.0028 2E-07 60.3 3.3 23 465-487 2-24 (244)
104 d2vp4a1 c.37.1.1 (A:12-208) De 95.5 0.0023 1.7E-07 59.2 2.5 24 464-487 10-33 (197)
105 d1wb1a4 c.37.1.8 (A:1-179) Elo 95.5 0.003 2.2E-07 57.9 3.1 21 466-486 8-28 (179)
106 d1puia_ c.37.1.8 (A:) Probable 95.5 0.0017 1.2E-07 59.1 1.1 24 464-487 17-40 (188)
107 d1jjva_ c.37.1.1 (A:) Dephosph 95.4 0.0035 2.5E-07 58.9 3.4 21 465-485 4-24 (205)
108 d1h65a_ c.37.1.8 (A:) Chloropl 95.4 0.003 2.2E-07 61.8 2.9 23 465-487 34-56 (257)
109 d1sxjc2 c.37.1.20 (C:12-238) R 95.4 0.0098 7.1E-07 56.1 6.6 21 466-486 38-58 (227)
110 d2cdna1 c.37.1.1 (A:1-181) Ade 95.4 0.0036 2.6E-07 57.2 3.3 23 465-487 2-24 (181)
111 d1ksha_ c.37.1.8 (A:) ADP-ribo 95.4 0.0046 3.4E-07 55.3 4.0 23 465-487 4-26 (165)
112 d1ky3a_ c.37.1.8 (A:) Rab-rela 95.4 0.004 2.9E-07 56.4 3.5 21 465-485 4-24 (175)
113 d2atva1 c.37.1.8 (A:5-172) Ras 95.4 0.007 5.1E-07 54.6 5.1 28 465-492 4-36 (168)
114 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 95.3 0.0074 5.4E-07 54.3 5.1 28 465-492 5-37 (170)
115 d1u8za_ c.37.1.8 (A:) Ras-rela 95.3 0.0077 5.6E-07 54.3 5.1 29 465-493 6-39 (168)
116 d1xzpa2 c.37.1.8 (A:212-371) T 95.2 0.0014 1E-07 58.4 -0.1 21 465-485 2-22 (160)
117 d2erya1 c.37.1.8 (A:10-180) r- 95.2 0.0078 5.7E-07 54.3 4.9 31 465-495 7-42 (171)
118 d1nn5a_ c.37.1.1 (A:) Thymidyl 95.1 0.0047 3.5E-07 58.3 3.2 28 461-488 1-28 (209)
119 d1xp8a1 c.37.1.11 (A:15-282) R 95.1 0.017 1.3E-06 56.5 7.3 54 459-515 53-107 (268)
120 d2gjsa1 c.37.1.8 (A:91-258) Ra 95.0 0.0089 6.5E-07 53.8 4.8 24 465-488 3-26 (168)
121 d1okkd2 c.37.1.10 (D:97-303) G 95.0 0.0048 3.5E-07 58.3 2.9 27 462-488 5-31 (207)
122 d2ak3a1 c.37.1.1 (A:0-124,A:16 95.0 0.0055 4E-07 56.8 3.3 108 465-599 8-116 (189)
123 d4tmka_ c.37.1.1 (A:) Thymidyl 95.0 0.0055 4E-07 57.4 3.3 27 462-488 1-27 (210)
124 d1z2aa1 c.37.1.8 (A:8-171) Rab 94.9 0.0078 5.7E-07 53.9 4.0 20 465-484 4-23 (164)
125 d2fh5b1 c.37.1.8 (B:63-269) Si 94.8 0.0062 4.5E-07 56.8 3.2 22 464-485 1-22 (207)
126 d1akya1 c.37.1.1 (A:3-130,A:16 94.8 0.0066 4.8E-07 55.4 3.3 30 465-498 4-33 (180)
127 d1ls1a2 c.37.1.10 (A:89-295) G 94.8 0.11 7.7E-06 48.7 11.9 26 463-488 10-35 (207)
128 d2g3ya1 c.37.1.8 (A:73-244) GT 94.8 0.015 1.1E-06 52.5 5.6 23 465-487 5-27 (172)
129 d2ew1a1 c.37.1.8 (A:4-174) Rab 94.7 0.011 8E-07 53.2 4.5 21 465-485 7-27 (171)
130 d1gvnb_ c.37.1.21 (B:) Plasmid 94.7 0.0058 4.2E-07 59.0 2.6 33 464-498 33-65 (273)
131 d1vhta_ c.37.1.1 (A:) Dephosph 94.7 0.0074 5.4E-07 56.7 3.3 22 465-486 5-26 (208)
132 d1ctqa_ c.37.1.8 (A:) cH-p21 R 94.7 0.011 7.9E-07 53.0 4.3 29 465-493 5-38 (166)
133 d1kaoa_ c.37.1.8 (A:) Rap2a {H 94.6 0.013 9.3E-07 52.5 4.7 29 465-493 5-38 (167)
134 d1tmka_ c.37.1.1 (A:) Thymidyl 94.6 0.0075 5.5E-07 57.0 3.2 27 462-488 2-28 (214)
135 d1kkma_ c.91.1.2 (A:) HPr kina 94.6 0.011 7.8E-07 54.3 4.0 32 452-484 4-35 (176)
136 d1zj6a1 c.37.1.8 (A:2-178) ADP 94.6 0.0075 5.5E-07 54.2 2.9 24 462-485 14-37 (177)
137 d1szpa2 c.37.1.11 (A:145-395) 94.5 0.0088 6.4E-07 56.4 3.4 25 460-484 31-55 (251)
138 d1tq4a_ c.37.1.8 (A:) Interfer 94.5 0.0091 6.6E-07 62.1 3.7 29 465-493 58-86 (400)
139 d3raba_ c.37.1.8 (A:) Rab3a {R 94.5 0.0084 6.1E-07 54.0 3.1 20 465-484 7-26 (169)
140 d2bcgy1 c.37.1.8 (Y:3-196) GTP 94.4 0.016 1.1E-06 53.5 4.9 27 466-492 9-40 (194)
141 d1wmsa_ c.37.1.8 (A:) Rab9a {H 94.4 0.016 1.2E-06 52.3 4.8 30 465-494 8-42 (174)
142 d1knxa2 c.91.1.2 (A:133-309) H 94.3 0.014 9.9E-07 53.6 4.0 32 452-484 5-36 (177)
143 d1a7ja_ c.37.1.6 (A:) Phosphor 94.3 0.0053 3.9E-07 60.9 1.2 24 465-488 6-29 (288)
144 d1fzqa_ c.37.1.8 (A:) ADP-ribo 94.3 0.0087 6.3E-07 54.0 2.6 21 465-485 18-38 (176)
145 d1z0ja1 c.37.1.8 (A:2-168) Rab 94.3 0.019 1.4E-06 51.4 5.0 29 465-493 6-39 (167)
146 d1pzna2 c.37.1.11 (A:96-349) D 94.3 0.0087 6.3E-07 57.0 2.7 24 460-483 33-56 (254)
147 d2f7sa1 c.37.1.8 (A:5-190) Rab 94.2 0.011 8.2E-07 53.9 3.3 21 465-485 7-27 (186)
148 d1x1ra1 c.37.1.8 (A:10-178) Ra 94.2 0.02 1.4E-06 51.5 4.9 29 465-493 6-39 (169)
149 d1zd9a1 c.37.1.8 (A:18-181) AD 94.2 0.011 8E-07 52.8 3.1 20 465-484 4-23 (164)
150 d1yzqa1 c.37.1.8 (A:14-177) Ra 94.2 0.018 1.3E-06 51.3 4.5 28 465-492 2-34 (164)
151 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 94.2 0.011 8.1E-07 53.9 3.1 20 465-484 4-23 (184)
152 d2p67a1 c.37.1.10 (A:1-327) LA 94.1 0.0062 4.5E-07 61.7 1.4 27 463-489 54-80 (327)
153 d1v5wa_ c.37.1.11 (A:) Meiotic 94.1 0.012 8.8E-07 55.8 3.4 25 460-484 34-58 (258)
154 d1z08a1 c.37.1.8 (A:17-183) Ra 94.1 0.016 1.2E-06 51.9 4.0 28 465-492 5-37 (167)
155 d2f9la1 c.37.1.8 (A:8-182) Rab 94.1 0.012 8.5E-07 53.3 3.1 21 465-485 6-26 (175)
156 d2qy9a2 c.37.1.10 (A:285-495) 94.0 0.0087 6.3E-07 56.6 2.1 26 463-488 9-34 (211)
157 d1in4a2 c.37.1.20 (A:17-254) H 94.0 0.01 7.4E-07 56.5 2.6 28 465-492 37-64 (238)
158 d1ofha_ c.37.1.20 (A:) HslU {H 94.0 0.011 8.2E-07 59.1 3.0 38 462-501 48-85 (309)
159 d2i1qa2 c.37.1.11 (A:65-322) D 94.0 0.013 9.7E-07 55.1 3.4 25 460-484 31-55 (258)
160 d1sxja2 c.37.1.20 (A:295-547) 93.9 0.013 9.3E-07 56.1 3.2 24 465-488 54-77 (253)
161 d1tf7a1 c.37.1.11 (A:14-255) C 93.9 0.015 1.1E-06 54.4 3.5 26 460-485 23-49 (242)
162 d2fnaa2 c.37.1.20 (A:1-283) Ar 93.8 0.013 9.4E-07 56.1 3.0 24 462-485 28-51 (283)
163 d1fnna2 c.37.1.20 (A:1-276) CD 93.7 0.017 1.2E-06 55.3 3.6 30 463-492 43-72 (276)
164 d2a5ja1 c.37.1.8 (A:9-181) Rab 93.7 0.015 1.1E-06 52.4 3.1 21 465-485 5-25 (173)
165 d1g16a_ c.37.1.8 (A:) Rab-rela 93.6 0.014 1E-06 52.2 2.7 21 465-485 4-24 (166)
166 d2bmja1 c.37.1.8 (A:66-240) Ce 93.6 0.028 2E-06 51.0 4.8 21 465-485 7-27 (175)
167 d1a1va1 c.37.1.14 (A:190-325) 93.6 0.0097 7.1E-07 51.5 1.4 35 584-619 88-122 (136)
168 d1gsia_ c.37.1.1 (A:) Thymidyl 93.5 0.017 1.2E-06 53.4 3.2 24 465-488 2-25 (208)
169 d1zcba2 c.37.1.8 (A:47-75,A:20 93.5 0.022 1.6E-06 52.1 4.0 28 465-492 4-33 (200)
170 d1m7ba_ c.37.1.8 (A:) RhoE (RN 93.5 0.026 1.9E-06 51.3 4.4 32 465-496 4-40 (179)
171 d2dy1a2 c.37.1.8 (A:8-274) Elo 93.5 0.014 1E-06 57.1 2.7 53 465-518 4-58 (267)
172 d1z06a1 c.37.1.8 (A:32-196) Ra 93.5 0.018 1.3E-06 51.3 3.1 20 465-484 4-23 (165)
173 d1vmaa2 c.37.1.10 (A:82-294) G 93.5 0.0099 7.2E-07 56.3 1.4 26 462-487 10-35 (213)
174 d1iqpa2 c.37.1.20 (A:2-232) Re 93.5 0.016 1.2E-06 54.8 2.9 23 465-487 47-69 (231)
175 d1sxjd2 c.37.1.20 (D:26-262) R 93.4 0.016 1.2E-06 54.7 2.8 22 466-487 36-57 (237)
176 d1r2qa_ c.37.1.8 (A:) Rab5a {H 93.4 0.036 2.7E-06 49.5 5.1 20 465-484 8-27 (170)
177 d1odfa_ c.37.1.6 (A:) Hypothet 93.3 0.019 1.4E-06 56.7 3.3 22 465-486 29-50 (286)
178 d1g41a_ c.37.1.20 (A:) HslU {H 93.3 0.017 1.3E-06 60.7 3.1 45 465-520 51-95 (443)
179 d1mh1a_ c.37.1.8 (A:) Rac {Hum 93.3 0.019 1.4E-06 52.2 3.1 20 465-484 7-26 (183)
180 d1p9ra_ c.37.1.11 (A:) Extrace 93.3 0.018 1.3E-06 59.8 3.1 33 461-493 156-188 (401)
181 d1deka_ c.37.1.1 (A:) Deoxynuc 93.3 0.019 1.4E-06 54.6 3.1 22 464-485 2-23 (241)
182 d1j8yf2 c.37.1.10 (F:87-297) G 93.2 0.011 8.3E-07 55.8 1.4 27 462-488 11-37 (211)
183 d1z0fa1 c.37.1.8 (A:8-173) Rab 93.2 0.02 1.5E-06 51.1 3.1 21 465-485 6-26 (166)
184 d1u94a1 c.37.1.11 (A:6-268) Re 93.2 0.015 1.1E-06 56.7 2.4 54 459-515 50-104 (263)
185 d1moza_ c.37.1.8 (A:) ADP-ribo 93.2 0.013 9.3E-07 53.3 1.6 21 464-484 18-38 (182)
186 d2g6ba1 c.37.1.8 (A:58-227) Ra 93.2 0.029 2.1E-06 50.2 4.1 20 465-484 8-27 (170)
187 d1ixsb2 c.37.1.20 (B:4-242) Ho 93.0 0.02 1.5E-06 54.4 2.9 23 466-488 38-60 (239)
188 d2fn4a1 c.37.1.8 (A:24-196) r- 93.0 0.02 1.5E-06 51.6 2.7 21 465-485 8-28 (173)
189 d2fu5c1 c.37.1.8 (C:3-175) Rab 93.0 0.015 1.1E-06 52.5 1.8 20 465-484 8-27 (173)
190 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 93.0 0.02 1.5E-06 51.7 2.7 22 464-485 3-24 (177)
191 d1ko7a2 c.91.1.2 (A:130-298) H 92.9 0.032 2.3E-06 50.7 3.9 31 453-484 6-36 (169)
192 d2bmea1 c.37.1.8 (A:6-179) Rab 92.8 0.022 1.6E-06 51.2 2.7 20 465-484 7-26 (174)
193 d1htwa_ c.37.1.18 (A:) Hypothe 92.8 0.027 2E-06 50.6 3.2 31 459-489 29-59 (158)
194 d1x3sa1 c.37.1.8 (A:2-178) Rab 92.7 0.026 1.9E-06 50.9 3.1 21 465-485 9-29 (177)
195 d1xpua3 c.37.1.11 (A:129-417) 92.7 0.021 1.5E-06 56.4 2.5 33 456-488 36-68 (289)
196 d1i2ma_ c.37.1.8 (A:) Ran {Hum 92.6 0.023 1.7E-06 51.1 2.4 19 465-483 5-23 (170)
197 d1svsa1 c.37.1.8 (A:32-60,A:18 92.4 0.026 1.9E-06 51.1 2.6 30 465-494 4-33 (195)
198 d1g7sa4 c.37.1.8 (A:1-227) Ini 92.4 0.029 2.1E-06 53.2 3.1 22 465-486 7-28 (227)
199 d1sxjb2 c.37.1.20 (B:7-230) Re 92.4 0.028 2E-06 52.8 2.8 22 466-487 39-60 (224)
200 d1mo6a1 c.37.1.11 (A:1-269) Re 92.3 0.023 1.7E-06 55.6 2.2 74 459-548 56-130 (269)
201 d1d2na_ c.37.1.20 (A:) Hexamer 92.2 0.028 2E-06 54.2 2.7 23 464-486 41-63 (246)
202 d2qm8a1 c.37.1.10 (A:5-327) Me 92.2 0.031 2.3E-06 56.2 3.1 25 463-487 51-75 (323)
203 d1e0sa_ c.37.1.8 (A:) ADP-ribo 92.1 0.02 1.5E-06 51.4 1.4 24 465-488 14-37 (173)
204 d2atxa1 c.37.1.8 (A:9-193) Rho 92.1 0.033 2.4E-06 50.8 2.9 20 465-484 11-30 (185)
205 d1c1ya_ c.37.1.8 (A:) Rap1A {H 92.1 0.036 2.6E-06 49.4 3.1 20 465-484 5-24 (167)
206 d2ngra_ c.37.1.8 (A:) CDC42 {H 91.9 0.051 3.7E-06 49.6 4.0 29 465-493 5-38 (191)
207 d2bv3a2 c.37.1.8 (A:7-282) Elo 91.9 0.034 2.5E-06 54.5 2.9 49 465-515 8-59 (276)
208 d1jala1 c.37.1.8 (A:1-278) Ych 91.7 0.031 2.3E-06 54.7 2.4 33 465-497 4-47 (278)
209 d2akab1 c.37.1.8 (B:6-304) Dyn 91.3 0.041 3E-06 54.0 2.8 23 465-487 28-50 (299)
210 d1e32a2 c.37.1.20 (A:201-458) 91.2 0.051 3.7E-06 52.5 3.4 24 464-487 39-62 (258)
211 d1azta2 c.37.1.8 (A:35-65,A:20 91.1 0.052 3.8E-06 51.0 3.3 39 464-502 7-50 (221)
212 d1f5na2 c.37.1.8 (A:7-283) Int 91.1 0.042 3E-06 54.0 2.6 24 464-487 33-56 (277)
213 d1wxqa1 c.37.1.8 (A:1-319) GTP 90.9 0.049 3.6E-06 54.2 2.9 22 465-486 2-23 (319)
214 d2ocpa1 c.37.1.1 (A:37-277) De 90.9 0.049 3.6E-06 51.4 2.8 25 464-488 3-27 (241)
215 d1r6bx3 c.37.1.20 (X:437-751) 90.8 0.043 3.2E-06 54.8 2.4 35 463-499 52-86 (315)
216 d1jwyb_ c.37.1.8 (B:) Dynamin 90.7 0.054 3.9E-06 53.4 3.0 52 577-633 154-207 (306)
217 d1w5sa2 c.37.1.20 (A:7-293) CD 90.7 0.045 3.3E-06 52.3 2.3 23 465-487 48-70 (287)
218 d1kk1a3 c.37.1.8 (A:6-200) Ini 90.0 0.083 6E-06 48.4 3.4 22 466-487 8-29 (195)
219 d2jdid3 c.37.1.11 (D:82-357) C 89.9 0.07 5.1E-06 52.1 3.0 32 455-486 60-91 (276)
220 d1svma_ c.37.1.20 (A:) Papillo 89.9 0.059 4.3E-06 54.9 2.5 40 459-501 150-190 (362)
221 d1e9ra_ c.37.1.11 (A:) Bacteri 89.8 0.048 3.5E-06 56.3 1.8 35 464-498 51-86 (433)
222 d1ni3a1 c.37.1.8 (A:11-306) Yc 89.8 0.065 4.7E-06 52.8 2.7 33 465-497 12-56 (296)
223 d2a5yb3 c.37.1.20 (B:109-385) 89.6 0.078 5.7E-06 51.7 3.1 23 463-485 44-66 (277)
224 d1yksa1 c.37.1.14 (A:185-324) 89.1 0.038 2.8E-06 46.9 0.3 21 460-480 4-24 (140)
225 d2c78a3 c.37.1.8 (A:9-212) Elo 89.0 0.087 6.3E-06 49.0 2.8 21 465-485 5-25 (204)
226 d1p6xa_ c.37.1.1 (A:) Thymidin 88.6 0.14 1E-05 51.3 4.2 32 465-496 8-39 (333)
227 d1qvra3 c.37.1.20 (A:536-850) 88.5 0.1 7.4E-06 52.0 3.1 38 464-501 54-92 (315)
228 d1fx0a3 c.37.1.11 (A:97-372) C 87.9 0.1 7.4E-06 51.0 2.6 43 456-498 60-102 (276)
229 d1u0ja_ c.37.1.20 (A:) Rep 40 87.9 0.14 1E-05 49.6 3.7 58 460-521 101-158 (267)
230 d1um8a_ c.37.1.20 (A:) ClpX {H 87.6 0.14 9.9E-06 52.1 3.4 35 466-502 71-105 (364)
231 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 87.3 0.13 9.2E-06 46.4 2.7 28 465-492 4-34 (200)
232 d1g8pa_ c.37.1.20 (A:) ATPase 87.1 0.067 4.9E-06 53.4 0.7 40 463-505 28-67 (333)
233 d1g8fa3 c.37.1.15 (A:390-511) 86.3 0.2 1.4E-05 42.5 3.1 39 461-499 4-45 (122)
234 d3b60a2 f.37.1.1 (A:10-328) Mu 86.1 13 0.00093 34.2 32.5 16 135-150 15-30 (319)
235 d1jbka_ c.37.1.20 (A:) ClpB, A 85.8 0.18 1.3E-05 46.5 2.9 23 465-487 45-67 (195)
236 d1l8qa2 c.37.1.20 (A:77-289) C 85.8 0.18 1.3E-05 47.1 2.9 71 587-660 94-168 (213)
237 d1gkub1 c.37.1.16 (B:1-250) He 85.7 0.11 7.7E-06 49.2 1.2 23 462-484 57-79 (237)
238 d1osna_ c.37.1.1 (A:) Thymidin 85.3 0.19 1.4E-05 50.4 2.9 30 465-494 7-36 (331)
239 d1njfa_ c.37.1.20 (A:) delta p 84.9 0.2 1.5E-05 47.3 2.8 26 465-490 36-61 (239)
240 d1ny5a2 c.37.1.20 (A:138-384) 84.9 0.24 1.8E-05 47.3 3.4 28 462-489 22-49 (247)
241 d1r6bx2 c.37.1.20 (X:169-436) 84.9 0.24 1.7E-05 48.1 3.3 23 465-487 41-63 (268)
242 d1e2ka_ c.37.1.1 (A:) Thymidin 84.7 0.22 1.6E-05 49.8 3.1 25 464-488 5-29 (329)
243 d1w44a_ c.37.1.11 (A:) NTPase 83.9 0.19 1.4E-05 50.1 2.1 30 457-487 118-147 (321)
244 d1a5ta2 c.37.1.20 (A:1-207) de 83.7 0.27 1.9E-05 45.5 3.0 24 465-488 26-49 (207)
245 d2jdia3 c.37.1.11 (A:95-379) C 83.5 0.17 1.3E-05 49.5 1.7 30 455-484 60-89 (285)
246 d2p6ra3 c.37.1.19 (A:1-202) He 83.0 0.1 7.3E-06 48.0 -0.4 20 462-481 39-58 (202)
247 d1nija1 c.37.1.10 (A:2-223) Hy 81.7 0.26 1.9E-05 46.2 2.1 22 465-486 5-26 (222)
248 d2qn6a3 c.37.1.8 (A:2-206) Ini 81.6 0.42 3.1E-05 43.8 3.6 24 465-488 10-33 (205)
249 d1tuea_ c.37.1.20 (A:) Replica 81.2 0.27 2E-05 45.4 2.0 33 459-494 49-81 (205)
250 d1puja_ c.37.1.8 (A:) Probable 81.2 0.43 3.1E-05 46.1 3.6 29 462-490 111-139 (273)
251 d2bmfa2 c.37.1.14 (A:178-482) 80.4 0.26 1.9E-05 47.6 1.7 25 460-484 6-32 (305)
252 d1zunb3 c.37.1.8 (B:16-237) Su 78.5 0.55 4E-05 43.9 3.3 19 466-484 12-30 (222)
253 d1w36d1 c.37.1.19 (D:2-360) Ex 78.2 0.78 5.6E-05 46.1 4.5 26 463-488 163-192 (359)
254 d1d2ea3 c.37.1.8 (A:55-250) El 76.5 0.58 4.2E-05 42.8 2.7 22 465-486 5-26 (196)
255 d1lkxa_ c.37.1.9 (A:) Myosin S 75.9 0.47 3.4E-05 52.0 2.2 27 461-487 84-110 (684)
256 d1jnya3 c.37.1.8 (A:4-227) Elo 75.8 0.59 4.3E-05 43.5 2.6 38 580-618 132-173 (224)
257 d2olra1 c.91.1.1 (A:228-540) P 75.2 0.6 4.3E-05 45.9 2.5 20 461-480 12-31 (313)
258 d1d0xa2 c.37.1.9 (A:2-33,A:80- 74.7 0.5 3.6E-05 52.0 2.0 28 461-488 123-150 (712)
259 d1n0ua2 c.37.1.8 (A:3-343) Elo 74.5 0.57 4.1E-05 46.8 2.2 19 466-484 20-38 (341)
260 d1f60a3 c.37.1.8 (A:2-240) Elo 72.7 0.79 5.8E-05 43.3 2.7 20 465-484 8-27 (239)
261 d1qvra2 c.37.1.20 (A:149-535) 72.1 0.64 4.7E-05 47.3 1.9 20 466-485 46-65 (387)
262 d1j3ba1 c.91.1.1 (A:212-529) P 71.7 0.75 5.4E-05 45.3 2.2 19 462-480 13-31 (318)
263 d1ii2a1 c.91.1.1 (A:201-523) P 71.6 0.84 6.1E-05 45.0 2.6 19 462-480 13-31 (323)
264 d2mysa2 c.37.1.9 (A:4-33,A:80- 71.2 0.62 4.5E-05 51.9 1.7 27 461-487 121-147 (794)
265 d1uaaa1 c.37.1.19 (A:2-307) DE 71.0 0.93 6.8E-05 43.4 2.8 17 464-480 15-31 (306)
266 d1pjra1 c.37.1.19 (A:1-318) DE 70.9 0.76 5.6E-05 44.5 2.2 17 464-480 25-41 (318)
267 d2gnoa2 c.37.1.20 (A:11-208) g 70.9 0.66 4.8E-05 42.5 1.6 108 462-637 14-121 (198)
268 d2hyda2 f.37.1.1 (A:1-323) Put 70.7 39 0.0028 30.7 24.3 11 304-314 206-216 (323)
269 d1br2a2 c.37.1.9 (A:80-789) My 69.6 1 7.4E-05 49.5 3.0 27 461-487 89-115 (710)
270 d1kk8a2 c.37.1.9 (A:1-28,A:77- 69.3 0.78 5.7E-05 51.1 2.0 27 462-488 120-146 (789)
271 d1g3qa_ c.37.1.10 (A:) Cell di 69.1 0.99 7.2E-05 41.4 2.4 41 463-503 2-43 (237)
272 d1w7ja2 c.37.1.9 (A:63-792) My 68.6 0.94 6.8E-05 49.9 2.5 27 461-487 92-118 (730)
273 d1wp9a1 c.37.1.19 (A:1-200) pu 67.8 1.2 9E-05 39.8 2.8 20 466-485 26-45 (200)
274 d1r5ba3 c.37.1.8 (A:215-459) E 64.9 1.1 8.1E-05 42.3 1.8 19 466-484 27-45 (245)
275 d2b8ta1 c.37.1.24 (A:11-149) T 62.1 1.8 0.00013 37.1 2.6 25 463-487 2-27 (139)
276 d1g5ta_ c.37.1.11 (A:) ATP:cor 61.2 2.5 0.00018 37.1 3.3 63 582-649 84-153 (157)
277 d1byia_ c.37.1.10 (A:) Dethiob 55.5 2.6 0.00019 37.7 2.6 33 464-496 2-35 (224)
278 d1cp2a_ c.37.1.10 (A:) Nitroge 53.8 3 0.00022 39.1 2.8 28 464-492 2-29 (269)
279 d1q0ua_ c.37.1.19 (A:) Probabl 52.5 3.5 0.00025 37.1 2.9 28 462-489 37-66 (209)
280 d1r0ka2 c.2.1.3 (A:3-126,A:265 49.2 3 0.00022 36.2 1.7 33 464-501 3-36 (150)
281 d1oywa2 c.37.1.19 (A:1-206) Re 46.1 3.4 0.00025 37.0 1.7 24 461-484 38-61 (206)
282 d1khba1 c.91.1.1 (A:260-622) C 44.0 5.8 0.00042 39.0 3.1 26 458-483 11-38 (363)
283 d1hyqa_ c.37.1.10 (A:) Cell di 42.9 4.7 0.00034 36.4 2.1 25 464-488 2-27 (232)
284 d2fz4a1 c.37.1.19 (A:24-229) D 42.4 6.3 0.00046 35.4 2.9 24 462-485 84-107 (206)
285 d1ihua2 c.37.1.10 (A:308-586) 42.2 6.8 0.0005 36.5 3.3 27 461-487 17-44 (279)
286 d1xbta1 c.37.1.24 (A:18-150) T 42.2 6.4 0.00047 33.1 2.8 27 462-488 1-27 (133)
287 d2ooda1 b.92.1.4 (A:3-72,A:398 41.7 6.2 0.00045 33.7 2.5 25 641-665 32-56 (140)
288 d1q0qa2 c.2.1.3 (A:1-125,A:275 41.1 4.5 0.00033 35.0 1.6 21 464-485 2-23 (151)
289 d2vqei1 d.14.1.1 (I:2-128) Rib 40.2 1.9 0.00014 36.4 -1.0 16 488-503 19-34 (127)
290 d1wrba1 c.37.1.19 (A:164-401) 38.3 6.7 0.00049 36.3 2.4 27 462-488 57-85 (238)
291 d1gg4a4 c.72.2.1 (A:99-312) UD 37.6 9.1 0.00066 33.8 3.2 27 462-490 1-27 (214)
292 d1c9ka_ c.37.1.11 (A:) Adenosy 37.3 8.7 0.00063 34.1 2.9 20 466-485 2-21 (180)
293 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 36.4 6.2 0.00045 41.3 2.0 17 464-480 25-41 (623)
294 d1qdea_ c.37.1.19 (A:) Initiat 34.6 9.7 0.0007 34.4 2.9 31 588-618 149-179 (212)
295 d2afhe1 c.37.1.10 (E:1-289) Ni 34.2 9.3 0.00068 35.9 2.8 31 464-495 3-34 (289)
296 d1xx6a1 c.37.1.24 (A:2-142) Th 32.8 9.2 0.00067 32.5 2.2 27 462-488 6-32 (141)
297 d1s2ma1 c.37.1.19 (A:46-251) P 32.8 10 0.00076 33.8 2.8 31 588-618 141-171 (206)
298 d1t6na_ c.37.1.19 (A:) Spliceo 32.3 11 0.00081 33.7 2.9 30 588-617 143-173 (207)
299 d2j0sa1 c.37.1.19 (A:22-243) P 30.8 9.2 0.00067 34.9 2.0 42 588-632 157-198 (222)
300 d1ihua1 c.37.1.10 (A:1-296) Ar 29.2 15 0.0011 34.1 3.3 25 464-488 9-33 (296)
301 d1hv8a1 c.37.1.19 (A:3-210) Pu 27.2 18 0.0013 32.1 3.4 30 589-618 144-173 (208)
302 d1j6ua3 c.72.2.1 (A:89-295) UD 23.8 21 0.0015 31.4 3.1 27 461-489 12-38 (207)
303 d2g9na1 c.37.1.19 (A:21-238) I 23.6 19 0.0014 32.4 2.8 42 588-632 153-194 (218)
304 d1veca_ c.37.1.19 (A:) DEAD bo 23.6 18 0.0013 32.3 2.5 42 588-632 144-185 (206)
305 d1rifa_ c.37.1.23 (A:) DNA hel 21.4 17 0.0012 34.2 2.0 26 463-488 128-153 (282)
No 1
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00 E-value=1.9e-77 Score=612.14 Aligned_cols=242 Identities=46% Similarity=0.728 Sum_probs=232.2
Q ss_pred ccccccEEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHH
Q 005740 429 QRLMGHVQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRW 508 (680)
Q Consensus 429 ~~~~g~I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~ 508 (680)
...+|+|+|+||+|+|+++ +++||+||||+|++||++|||||||||||||+++|+|+|+|++|+|++||+|+++++.++
T Consensus 11 ~~~~g~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~ 89 (255)
T d2hyda1 11 EIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGS 89 (255)
T ss_dssp CCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEEGGGSCHHH
T ss_pred CCCCCEEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCcHHHHHHHHHhcCCccccccccCCEEcccCCHHH
Confidence 3456899999999999864 468999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccEEEEccCCcCccccHHHHHhcCCCCCCCHHHHHHHHHHhcHHHHHHcCCCCcccccCCC--CCChHHHHHHHHHHH
Q 005740 509 LREKIGFVGQEPQLLQMDIKSNIMYGCPKDVKNEDIEWAAKQAYVHEFILSLPCGYETLVDDD--LLSGGQKQRIAIARA 586 (680)
Q Consensus 509 LR~~I~~V~Qd~~LF~gTI~eNI~~g~~~~~s~eei~~A~~~a~l~dfI~~LP~G~dT~vge~--~LSGGQrQRIaIARA 586 (680)
||++|+||+|+++||++||+|||++|. ++++++++++|++.+++++|+.+||+||||.+|++ +||||||||||||||
T Consensus 90 lr~~i~~v~Q~~~lf~~Ti~eNi~~g~-~~~~~~~~~~al~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~QRi~iARa 168 (255)
T d2hyda1 90 LRNQIGLVQQDNILFSDTVKENILLGR-PTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARI 168 (255)
T ss_dssp HHHTEEEECSSCCCCSSBHHHHHGGGC-SSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHHHHHHHHHH
T ss_pred hhheeeeeeccccCCCCCHHHHHhccC-cCCCHHHHHHHHHHhCCHHHHHhccccccchhcCCCCCcCHHHHHHHHHHHH
Confidence 999999999999999999999999994 68999999999999999999999999999999983 999999999999999
Q ss_pred HccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEEEEeCCEEEEecChHHHhhcCc
Q 005740 587 ILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIVVIDDGRIIEVGNHAELLHKGR 666 (680)
Q Consensus 587 ll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~vl~~G~Ive~Gth~eLl~~~g 666 (680)
|+++|+|||||||||+||++||+.|.+.|+++. +++|+|+||||+++++.||||+||++|+|+|.|+|+||++++|
T Consensus 169 l~~~p~ililDEpts~LD~~t~~~i~~~l~~l~----~~~TvI~itH~~~~~~~~D~ii~l~~G~iv~~G~~~eLl~~~~ 244 (255)
T d2hyda1 169 FLNNPPILILDEATSALDLESESIIQEALDVLS----KDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQG 244 (255)
T ss_dssp HHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHT----TTSEEEEECSSGGGTTTCSEEEEEETTEEEEEECHHHHHHTTS
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh----cCCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCc
Confidence 999999999999999999999999999999884 5799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh
Q 005740 667 LYAKLVKRQT 676 (680)
Q Consensus 667 ~Y~~L~~~q~ 676 (680)
.|++||+.|.
T Consensus 245 ~y~~l~~~Q~ 254 (255)
T d2hyda1 245 AYEHLYSIQN 254 (255)
T ss_dssp HHHHHHTTTT
T ss_pred HHHHHHHHcC
Confidence 9999998874
No 2
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.8e-76 Score=600.45 Aligned_cols=238 Identities=47% Similarity=0.739 Sum_probs=228.2
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccE
Q 005740 434 HVQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKI 513 (680)
Q Consensus 434 ~I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I 513 (680)
+|+|+||||+|+++ +++||+||||+|++||++|||||||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|
T Consensus 1 eI~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i 79 (241)
T d2pmka1 1 DITFRNIRFRYKPD-SPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQV 79 (241)
T ss_dssp EEEEEEEEEESSTT-SCEEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHE
T ss_pred CeEEEEEEEEeCCC-CcceEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCCCCEEEECCEEecccchhhhhceE
Confidence 58999999999754 45799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCcCccccHHHHHhcCCCCCCCHHHHHHHHHHhcHHHHHHcCCCCcccccCCC--CCChHHHHHHHHHHHHccCC
Q 005740 514 GFVGQEPQLLQMDIKSNIMYGCPKDVKNEDIEWAAKQAYVHEFILSLPCGYETLVDDD--LLSGGQKQRIAIARAILRDP 591 (680)
Q Consensus 514 ~~V~Qd~~LF~gTI~eNI~~g~~~~~s~eei~~A~~~a~l~dfI~~LP~G~dT~vge~--~LSGGQrQRIaIARAll~~p 591 (680)
|||||||+||++||+|||+++ .+++++++++++++.+++++++..+|+|++|.+|+. +|||||||||||||||+++|
T Consensus 80 ~~v~Q~~~lf~~Ti~eNi~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~t~i~~~g~~LSGGq~QRvalARal~~~p 158 (241)
T d2pmka1 80 GVVLQDNVLLNRSIIDNISLA-NPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNP 158 (241)
T ss_dssp EEECSSCCCTTSBHHHHHCTT-STTCCHHHHHHHHHHHTCHHHHTTSTTGGGSBCSTTTTCCCHHHHHHHHHHHHHTTCC
T ss_pred EEEecccccCCcccccccccc-CccccHHHHHHHHHHHhhHHHHHhhhcchhhhcCCCCCccCHHHHHHHhhhhhhhccc
Confidence 999999999999999999999 468999999999999999999999999999999984 99999999999999999999
Q ss_pred CeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEEEEeCCEEEEecChHHHhhc-CcHHHH
Q 005740 592 AILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIVVIDDGRIIEVGNHAELLHK-GRLYAK 670 (680)
Q Consensus 592 ~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~vl~~G~Ive~Gth~eLl~~-~g~Y~~ 670 (680)
+|||||||||+||+.+|+.|.+.|+++. +++|+|+||||+++++.||||+||++|+|+|+|+|+||+++ ++.|++
T Consensus 159 ~ililDEpts~LD~~~~~~i~~~l~~l~----~~~Tvi~itH~l~~~~~~D~i~vl~~G~Iv~~G~~~ell~~~~~~y~~ 234 (241)
T d2pmka1 159 KILIFDEATSALDYESEHVIMRNMHKIC----KGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESLYSY 234 (241)
T ss_dssp SEEEECCCCSCCCHHHHHHHHHHHHHHH----TTSEEEEECSSGGGGTTSSEEEEEETTEEEEEECHHHHHHSTTCHHHH
T ss_pred chhhhhCCccccCHHHHHHHHHHHHHHh----CCCEEEEEECCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHH
Confidence 9999999999999999999999999985 47999999999999999999999999999999999999987 689999
Q ss_pred HHHHhhh
Q 005740 671 LVKRQTE 677 (680)
Q Consensus 671 L~~~q~~ 677 (680)
||+.|.+
T Consensus 235 l~~~Q~d 241 (241)
T d2pmka1 235 LYQLQSD 241 (241)
T ss_dssp HHHHHCC
T ss_pred HHHHhcC
Confidence 9999853
No 3
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=100.00 E-value=3.3e-76 Score=603.63 Aligned_cols=243 Identities=47% Similarity=0.753 Sum_probs=233.0
Q ss_pred ccccccEEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHH
Q 005740 429 QRLMGHVQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRW 508 (680)
Q Consensus 429 ~~~~g~I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~ 508 (680)
....|+|+|+||+|+|+++ +.++|+||||+|++||++|||||||||||||+++|+|+|+|++|+|++||+|+++++.++
T Consensus 8 ~~~~g~I~~~nvsf~Y~~~-~~~~L~~isl~i~~Ge~iaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~ 86 (253)
T d3b60a1 8 DRATGDLEFRNVTFTYPGR-EVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLAS 86 (253)
T ss_dssp SCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTBCHHH
T ss_pred CCCceEEEEEEEEEEeCCC-CCceeeceEEEEcCCCEEEEECCCCChHHHHHHHHhcccCCCccEEEECCcccchhhhhh
Confidence 3457899999999999864 467999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccEEEEccCCcCccccHHHHHhcCCCCCCCHHHHHHHHHHhcHHHHHHcCCCCcccccCCC--CCChHHHHHHHHHHH
Q 005740 509 LREKIGFVGQEPQLLQMDIKSNIMYGCPKDVKNEDIEWAAKQAYVHEFILSLPCGYETLVDDD--LLSGGQKQRIAIARA 586 (680)
Q Consensus 509 LR~~I~~V~Qd~~LF~gTI~eNI~~g~~~~~s~eei~~A~~~a~l~dfI~~LP~G~dT~vge~--~LSGGQrQRIaIARA 586 (680)
+|++|+||+|+++||++|+++|+.+|..++.+++++++|++.+++++||.++|+||||.+|+. +||||||||||||||
T Consensus 87 ~r~~i~~v~Q~~~l~~~ti~~n~~~~~~~~~~~~~i~~a~~~~~l~~~i~~l~~gl~t~~~~~~~~LSGGqkQRvaiARa 166 (253)
T d3b60a1 87 LRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARA 166 (253)
T ss_dssp HHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHHHHHHHHHH
T ss_pred hhheEEEEeeccccCCcchhhhhhhcCcccCCHHHHHHHHHHHhHHHHHHhccccchhhhcCCCCCcCHHHHHHHHHHHH
Confidence 999999999999999999999999996556899999999999999999999999999999984 899999999999999
Q ss_pred HccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEEEEeCCEEEEecChHHHhhcCc
Q 005740 587 ILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIVVIDDGRIIEVGNHAELLHKGR 666 (680)
Q Consensus 587 ll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~vl~~G~Ive~Gth~eLl~~~g 666 (680)
|+++|+|||||||||+||+++|+.|++.|+++. +++|+|+||||+++++.||||+||++|+|+|+|+|+||++++|
T Consensus 167 l~~~p~ililDEpts~LD~~~~~~i~~~l~~l~----~~~Tvi~itH~l~~~~~~D~v~vl~~G~Iv~~G~~~eLl~~~~ 242 (253)
T d3b60a1 167 LLRDSPILILDEATSALDTESERAIQAALDELQ----KNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHG 242 (253)
T ss_dssp HHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHH----TTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHHHHHTS
T ss_pred HhcCCCEEEeccccccCCHHHHHHHHHHHHHhc----cCCEEEEEECCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCc
Confidence 999999999999999999999999999999985 4699999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh
Q 005740 667 LYAKLVKRQT 676 (680)
Q Consensus 667 ~Y~~L~~~q~ 676 (680)
.|++||+.|.
T Consensus 243 ~y~~l~~~Q~ 252 (253)
T d3b60a1 243 VYAQLHKMQF 252 (253)
T ss_dssp SHHHHHHHTC
T ss_pred HHHHHHHHcc
Confidence 9999999986
No 4
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=4.9e-75 Score=594.23 Aligned_cols=242 Identities=42% Similarity=0.703 Sum_probs=230.8
Q ss_pred cccccEEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHh
Q 005740 430 RLMGHVQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWL 509 (680)
Q Consensus 430 ~~~g~I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~L 509 (680)
..+|.|+|+||||+||++++.+||+||||+|++||++|||||||||||||+++|+|+|+|++|+|++||+|+++++.+++
T Consensus 7 ~~~g~I~~~nvsf~Y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~li~gl~~p~~G~I~i~g~~i~~~~~~~~ 86 (251)
T d1jj7a_ 7 HLEGLVQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYL 86 (251)
T ss_dssp CCCCCEEEEEEEECCTTSTTCCSEEEEEEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGBCHHHH
T ss_pred cccceEEEEEEEEECCCCCCCEeEeceEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCcCEEEECCEecchhhhHHH
Confidence 35689999999999997666679999999999999999999999999999999999999999999999999999999999
Q ss_pred hccEEEEccCCcCccccHHHHHhcCCCCCCCHHHHHHHHHHhcHHHHHHcCCCCcccccCC--CCCChHHHHHHHHHHHH
Q 005740 510 REKIGFVGQEPQLLQMDIKSNIMYGCPKDVKNEDIEWAAKQAYVHEFILSLPCGYETLVDD--DLLSGGQKQRIAIARAI 587 (680)
Q Consensus 510 R~~I~~V~Qd~~LF~gTI~eNI~~g~~~~~s~eei~~A~~~a~l~dfI~~LP~G~dT~vge--~~LSGGQrQRIaIARAl 587 (680)
|++|+||+|+|+||++||+|||.+|..++.+++++.++++.+++++++.+||+|++|.+++ .+|||||||||||||||
T Consensus 87 r~~i~~v~Q~~~lf~~tv~eni~~g~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~i~~~~~~LSGGqkQRvaiARal 166 (251)
T d1jj7a_ 87 HRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARAL 166 (251)
T ss_dssp HHHEEEECSSCCCCSSBHHHHHHCSCSSCCCHHHHHHHHHHHTCHHHHHTSTTGGGCBCCSSCSSSCHHHHHHHHHHHHH
T ss_pred HHHhhhccccccccCcchhhhhhhhhcccchHHHHHHHHHHHHHHHHHHhccccchhhHhccCccCChhHceEEEEeecc
Confidence 9999999999999999999999999656788999999999999999999999999999998 39999999999999999
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEEEEeCCEEEEecChHHHhhcCcH
Q 005740 588 LRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIVVIDDGRIIEVGNHAELLHKGRL 667 (680)
Q Consensus 588 l~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~vl~~G~Ive~Gth~eLl~~~g~ 667 (680)
+++|+|||||||||+||+.+|..|++.|+++.+. .++|+|+||||+++++.||||+||++|+|+|+|||+||++++|.
T Consensus 167 ~~~p~ililDEpTs~LD~~~~~~i~~~l~~l~~~--~~~Tvi~itH~l~~~~~aDrI~vl~~G~iv~~Gt~~eLl~~~~~ 244 (251)
T d1jj7a_ 167 IRKPCVLILDDATSALDANSQLQVEQLLYESPER--YSRSVLLITQHLSLVEQADHILFLEGGAIREGGTHQQLMEKKGC 244 (251)
T ss_dssp TTCCSEEEEESTTTTCCHHHHHHHHHHHHTCGGG--GGCEEEEECSCHHHHHTCSEEEEEETTEEEEEECHHHHHHHTSH
T ss_pred ccCCcEEEecCcCcccChhhHHHHHHHHHHHhhh--cCCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCcH
Confidence 9999999999999999999999999999887542 37999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 005740 668 YAKLVK 673 (680)
Q Consensus 668 Y~~L~~ 673 (680)
|++||+
T Consensus 245 y~~l~~ 250 (251)
T d1jj7a_ 245 YWAMVQ 250 (251)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 999985
No 5
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=100.00 E-value=9.7e-75 Score=588.94 Aligned_cols=236 Identities=42% Similarity=0.675 Sum_probs=227.4
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEE
Q 005740 435 VQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIG 514 (680)
Q Consensus 435 I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~ 514 (680)
|+++||||+|++ +++||+||||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+|+++++.+++|++||
T Consensus 2 le~knvsf~Y~~--~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 79 (242)
T d1mv5a_ 2 LSARHVDFAYDD--SEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIG 79 (242)
T ss_dssp EEEEEEEECSSS--SSCSEEEEEEEECTTEEEEEECCTTSSHHHHHHHHTTSSCCSBSCEEETTEESTTTSCSCCTTTCC
T ss_pred EEEEEEEEECCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHHhhCCCCCEEEECCEEeccccHHHHHhheE
Confidence 799999999975 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCcCccccHHHHHhcCCCCCCCHHHHHHHHHHhcHHHHHHcCCCCcccccCCC--CCChHHHHHHHHHHHHccCCC
Q 005740 515 FVGQEPQLLQMDIKSNIMYGCPKDVKNEDIEWAAKQAYVHEFILSLPCGYETLVDDD--LLSGGQKQRIAIARAILRDPA 592 (680)
Q Consensus 515 ~V~Qd~~LF~gTI~eNI~~g~~~~~s~eei~~A~~~a~l~dfI~~LP~G~dT~vge~--~LSGGQrQRIaIARAll~~p~ 592 (680)
||+|||+||++||+|||.++..++.++++++++++.+++.+++..+|+|++|.+|++ +|||||||||||||||+++|+
T Consensus 80 ~v~Q~~~lf~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~LSGGqkQRv~iARal~~~p~ 159 (242)
T d1mv5a_ 80 FVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPK 159 (242)
T ss_dssp EECCSSCCCCEEHHHHTTSCTTSCSCHHHHHHHHHHHTCTTTTTSSTTGGGCEESTTSBCCCHHHHHHHHHHHHHHHCCS
T ss_pred EEccccccCCcchhhheecccccccchhhHHHHHHHHHhhhhhccCcccccccccCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999986567899999999999999999999999999999984 999999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEEEEeCCEEEEecChHHHhhcCcHHHHHH
Q 005740 593 ILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIVVIDDGRIIEVGNHAELLHKGRLYAKLV 672 (680)
Q Consensus 593 ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~vl~~G~Ive~Gth~eLl~~~g~Y~~L~ 672 (680)
|||||||||+||+++|+.|++.|+++. +++|+|+||||+++++.||||+||++|+|+|+|+|+||+++++.|++|+
T Consensus 160 ililDEpts~LD~~~~~~i~~~l~~l~----~~~Tvi~itH~l~~~~~~D~i~vl~~G~iv~~G~~~eLl~~~~~y~~l~ 235 (242)
T d1mv5a_ 160 ILMLDEATASLDSESESMVQKALDSLM----KGRTTLVIAHRLSTIVDADKIYFIEKGQITGSGKHNELVATHPLYAKYV 235 (242)
T ss_dssp EEEEECCSCSSCSSSCCHHHHHHHHHH----TTSEEEEECCSHHHHHHCSEEEEEETTEECCCSCHHHHHHHCHHHHHHH
T ss_pred EEEecCCccccCHHHHHHHHHHHHHHc----CCCEEEEEECCHHHHHhCCEEEEEECCEEEEECCHHHHHhCChHHHHHH
Confidence 999999999999999999999999985 4799999999999999999999999999999999999999999999999
Q ss_pred HHhh
Q 005740 673 KRQT 676 (680)
Q Consensus 673 ~~q~ 676 (680)
+.|.
T Consensus 236 ~~Q~ 239 (242)
T d1mv5a_ 236 SEQL 239 (242)
T ss_dssp HCCC
T ss_pred HHHh
Confidence 9885
No 6
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=3.6e-61 Score=499.21 Aligned_cols=219 Identities=26% Similarity=0.418 Sum_probs=197.5
Q ss_pred cccEEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhc
Q 005740 432 MGHVQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLRE 511 (680)
Q Consensus 432 ~g~I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~ 511 (680)
.+.|+|+|++|.+ +|||+||||+|++||++|||||||||||||+++|+|+|+|++|+|.+||
T Consensus 36 ~~~i~~~~~~~~g-----~pvL~~isl~i~~Ge~vaivG~nGsGKSTLl~~i~Gl~~p~~G~I~~~g------------- 97 (281)
T d1r0wa_ 36 ENNVSFSHLCLVG-----NPVLKNINLNIEKGEMLAITGSTGSGKTSLLMLILGELEASEGIIKHSG------------- 97 (281)
T ss_dssp ----CHHHHHHTT-----CEEEEEEEEEECTTCEEEEEESTTSSHHHHHHHHHTSSCCSEEEEECCS-------------
T ss_pred CCcEEEEEcCCCC-----CeEEeCeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCcCCCcEEEECC-------------
Confidence 3456777666532 4799999999999999999999999999999999999999999999999
Q ss_pred cEEEEccCCcCccccHHHHHhcCCCCCCCHHHHHHHHHHhcHHHHHHcCCCCcccccCCC--CCChHHHHHHHHHHHHcc
Q 005740 512 KIGFVGQEPQLLQMDIKSNIMYGCPKDVKNEDIEWAAKQAYVHEFILSLPCGYETLVDDD--LLSGGQKQRIAIARAILR 589 (680)
Q Consensus 512 ~I~~V~Qd~~LF~gTI~eNI~~g~~~~~s~eei~~A~~~a~l~dfI~~LP~G~dT~vge~--~LSGGQrQRIaIARAll~ 589 (680)
+|+||||++++|++||+|||.||. ..++++++++++.+++++++..+|+|++|.+|+. +|||||||||||||||++
T Consensus 98 ~i~~v~Q~~~l~~~tv~eni~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~LSgGqkQRv~lARaL~~ 175 (281)
T d1r0wa_ 98 RVSFCSQFSWIMPGTIKENIIFGV--SYDEYRYKSVVKACQLQQDITKFAEQDNTVLGEGGVTLSGGQRARISLARAVYK 175 (281)
T ss_dssp CEEEECSSCCCCSEEHHHHHTTTS--CCCHHHHHHHHHHTTCHHHHTTSTTGGGCEECTTCTTSCHHHHHHHHHHHHHHS
T ss_pred EEEEEeccccccCceeeccccccc--cccchHHHHHHHHHHhHHHHHhchhhhhhhhhhhccCCCHHHHHHHHHHHHHHh
Confidence 499999999999999999999993 5788999999999999999999999999999984 899999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEEEEeCCEEEEecChHHHhhcCcHHH
Q 005740 590 DPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIVVIDDGRIIEVGNHAELLHKGRLYA 669 (680)
Q Consensus 590 ~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~vl~~G~Ive~Gth~eLl~~~g~Y~ 669 (680)
+|+|||||||||+||+.+++.|.+.+... ..+++|+|+||||++.++.||||+||++|+|++.|||+||++.++.|+
T Consensus 176 ~p~illLDEPts~LD~~~~~~i~~~~~~~---~~~~~tvi~itH~~~~l~~aDrI~vl~~G~i~~~Gt~~eL~~~~~~~~ 252 (281)
T d1r0wa_ 176 DADLYLLDSPFGYLDVFTEEQVFESCVCK---LMANKTRILVTSKMEHLRKADKILILHQGSSYFYGTFSELQSLRPDFS 252 (281)
T ss_dssp CCSEEEEESCCCSSCHHHHHHHHHHCCCC---CTTTSEEEEECSCHHHHHTCSEEEEEETTEEEEEECHHHHHHHCHHHH
T ss_pred CccchhhcCccccCCHHHHHHHHHHHHHH---hhCCCEEEEEechHHHHHhCCEEEEEECCEEEEECCHHHHhccCcHHH
Confidence 99999999999999999999988654222 146799999999999999999999999999999999999999888887
Q ss_pred HHHH
Q 005740 670 KLVK 673 (680)
Q Consensus 670 ~L~~ 673 (680)
+.+.
T Consensus 253 ~~~~ 256 (281)
T d1r0wa_ 253 SKLM 256 (281)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 7653
No 7
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=100.00 E-value=2.3e-56 Score=446.71 Aligned_cols=213 Identities=33% Similarity=0.563 Sum_probs=191.1
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEE
Q 005740 435 VQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIG 514 (680)
Q Consensus 435 I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~ 514 (680)
|+++|||++|++ .+|+||||+|++||++||+||||||||||+++|.|+++|++|+|++||+|+.+++.. |++||
T Consensus 2 i~v~nlsk~y~~----~aL~~vs~~i~~Ge~~~liGpsGaGKSTll~~l~Gl~~p~sG~I~~~G~~i~~~~~~--~r~ig 75 (229)
T d3d31a2 2 IEIESLSRKWKN----FSLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPE--KHDIA 75 (229)
T ss_dssp EEEEEEEEECSS----CEEEEEEEEECTTCEEEEECCCTHHHHHHHHHHHTSSCCSEEEEEETTEECTTSCHH--HHTCE
T ss_pred EEEEEEEEEeCC----EEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCcCCCCCEEEEccEeccccchh--Hhcce
Confidence 789999999953 489999999999999999999999999999999999999999999999999988865 78999
Q ss_pred EEccCCcCc-cccHHHHHhcCCC--CCCCHHHHHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHHHHHccCC
Q 005740 515 FVGQEPQLL-QMDIKSNIMYGCP--KDVKNEDIEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIARAILRDP 591 (680)
Q Consensus 515 ~V~Qd~~LF-~gTI~eNI~~g~~--~~~s~eei~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIARAll~~p 591 (680)
||+|++.|| +-||+|||.|+.. ....++++.++++..++.++..+.| ..||||||||+||||||+.||
T Consensus 76 ~v~Q~~~l~~~~tV~enl~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~---------~~LSGG~~QRvaiAraL~~~P 146 (229)
T d3d31a2 76 FVYQNYSLFPHMNVKKNLEFGMRMKKIKDPKRVLDTARDLKIEHLLDRNP---------LTLSGGEQQRVALARALVTNP 146 (229)
T ss_dssp EECTTCCCCTTSCHHHHHHHHHHHHCCCCHHHHHHHHHHTTCTTTTTSCG---------GGSCHHHHHHHHHHHHTTSCC
T ss_pred eeccccccCccccHHHHHHHHHhhccccHHHHHHHHHHHhcchhhHhCCh---------hhCCHHHhcchhhhhhhhccC
Confidence 999999999 4699999988631 1235678888888887766554443 259999999999999999999
Q ss_pred CeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhh-cCEEEEEeCCEEEEecChHHHhhc
Q 005740 592 AILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKA-VDRIVVIDDGRIIEVGNHAELLHK 664 (680)
Q Consensus 592 ~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~-aD~I~vl~~G~Ive~Gth~eLl~~ 664 (680)
+|||||||||+||+.+.+.|++.|+++.++ .|.|+|+|||++..+.. ||||++|++|+|++.|+++|++++
T Consensus 147 ~iLllDEPts~LD~~~~~~i~~~l~~l~~~--~g~tii~vtHd~~~~~~~~drv~vm~~G~iv~~g~~~el~~~ 218 (229)
T d3d31a2 147 KILLLDEPLSALDPRTQENAREMLSVLHKK--NKLTVLHITHDQTEARIMADRIAVVMDGKLIQVGKPEEIFEK 218 (229)
T ss_dssp SEEEEESSSTTSCHHHHHHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHCSEEEEESSSCEEEEECHHHHHSS
T ss_pred CceeecCCCcCCCHHHHHHHHHHHHHHHhc--CCcEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999998653 47899999999998876 999999999999999999999976
No 8
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=2.2e-56 Score=448.25 Aligned_cols=218 Identities=29% Similarity=0.469 Sum_probs=165.0
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEE
Q 005740 435 VQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIG 514 (680)
Q Consensus 435 I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~ 514 (680)
|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|++||+++.+.+. .|++||
T Consensus 1 Iev~nv~k~yg~---~~~l~~isl~i~~Gei~~liGpsGsGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~--~~r~ig 75 (232)
T d2awna2 1 VQLQNVTKAWGE---VVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPP--AERGVG 75 (232)
T ss_dssp EEEEEEEEEETT---EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEESSSCCTTSCG--GGTCEE
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEECCCCch--hhceee
Confidence 799999999963 479999999999999999999999999999999999999999999999999998875 467899
Q ss_pred EEccCCcCc-cccHHHHHhcCCC-CCC----CHHHHHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHHHHHc
Q 005740 515 FVGQEPQLL-QMDIKSNIMYGCP-KDV----KNEDIEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIARAIL 588 (680)
Q Consensus 515 ~V~Qd~~LF-~gTI~eNI~~g~~-~~~----s~eei~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIARAll 588 (680)
||||++.|| +.|++|||.++.. ... .++.+.++++..++.++..+.|. .||||||||+||||||+
T Consensus 76 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~---------~LSGGqkQRvaiAraL~ 146 (232)
T d2awna2 76 MVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKPK---------ALSGGQRQRVAIGRTLV 146 (232)
T ss_dssp EECSSCCC---------------------CHHHHHHHHHHHHC------------------------------CHHHHHH
T ss_pred eeccccccccchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCChhhhhCChh---------hCCHHHHHHHHHHHHHh
Confidence 999999999 5599999998732 112 23557888888888887766653 59999999999999999
Q ss_pred cCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhh-cCEEEEEeCCEEEEecChHHHhhc-Cc
Q 005740 589 RDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKA-VDRIVVIDDGRIIEVGNHAELLHK-GR 666 (680)
Q Consensus 589 ~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~-aD~I~vl~~G~Ive~Gth~eLl~~-~g 666 (680)
.||++|+||||||+||+.+.+.|++.|.++.++ .|+|+|+|||.+..+.. ||||++|++|+|++.|+++|++++ ..
T Consensus 147 ~~P~illlDEPts~LD~~~~~~i~~~l~~l~~~--~g~tii~vTHd~~~a~~~~dri~vm~~G~iv~~G~~~el~~~P~~ 224 (232)
T d2awna2 147 AEPSVFLLDEPLSNLDAALRVQMRIEISRLHKR--LGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPAD 224 (232)
T ss_dssp TCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHH--SCCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHSCSB
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEeCHHHHHhCCCC
Confidence 999999999999999999999999999998653 48999999999998877 999999999999999999999986 34
Q ss_pred HH
Q 005740 667 LY 668 (680)
Q Consensus 667 ~Y 668 (680)
.|
T Consensus 225 ~~ 226 (232)
T d2awna2 225 RF 226 (232)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 9
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=100.00 E-value=5.8e-56 Score=446.60 Aligned_cols=220 Identities=30% Similarity=0.521 Sum_probs=187.0
Q ss_pred ccEEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhcc
Q 005740 433 GHVQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREK 512 (680)
Q Consensus 433 g~I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~ 512 (680)
..|+++||+++|++ ..||+||||+|++||++||+||||||||||+++|.|+++|++|+|++||+|+.+++.. |++
T Consensus 5 ~~I~v~nlsk~yg~---~~al~~vsl~v~~Ge~~~liGpsGaGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~~--~r~ 79 (239)
T d1v43a3 5 VEVKLENLTKRFGN---FTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPK--DRN 79 (239)
T ss_dssp CCEEEEEEEEEETT---EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGG--GGT
T ss_pred CeEEEEEEEEEECC---EEEEcceeEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCEEEEcceecccCCcc--cce
Confidence 35999999999963 4799999999999999999999999999999999999999999999999999988854 678
Q ss_pred EEEEccCCcCc-cccHHHHHhcCCC-CCCCHHH----HHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHHHH
Q 005740 513 IGFVGQEPQLL-QMDIKSNIMYGCP-KDVKNED----IEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIARA 586 (680)
Q Consensus 513 I~~V~Qd~~LF-~gTI~eNI~~g~~-~~~s~ee----i~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIARA 586 (680)
||||||++.|| +.||+||+.|+.. ...+.++ +.++++..++.++..+.|. .||||||||+|||||
T Consensus 80 ig~v~Q~~~l~~~ltv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~LSGGq~QRvaiAra 150 (239)
T d1v43a3 80 ISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAELLQIEELLNRYPA---------QLSGGQRQRVAVARA 150 (239)
T ss_dssp EEEEEC------CCCHHHHHHTTCC--CCCHHHHHHHHHHHHHHTTCGGGTTSCTT---------TCCSSCHHHHHHHHH
T ss_pred EEEEeechhhcccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhcCChh---------hCCHHHHHHHHHHhh
Confidence 99999999999 5799999999742 2345444 4556667766555444443 699999999999999
Q ss_pred HccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhh-cCEEEEEeCCEEEEecChHHHhhcC
Q 005740 587 ILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKA-VDRIVVIDDGRIIEVGNHAELLHKG 665 (680)
Q Consensus 587 ll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~-aD~I~vl~~G~Ive~Gth~eLl~~~ 665 (680)
|+.+|+|||||||||+||+.+...|.+.|+++.++ .|+|+|+|||.+..+.. ||||++|++|+|+++|+++|+.++.
T Consensus 151 L~~~P~iLllDEPts~LD~~~~~~i~~ll~~l~~~--~g~tii~vTHd~~~a~~~~dri~vm~~G~iv~~G~~~el~~~P 228 (239)
T d1v43a3 151 IVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQK--LKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRP 228 (239)
T ss_dssp HTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHH--HTCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHCC
T ss_pred hccCCCceeecCCcccCCHHHHHHHHHHHHHHHHh--cCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999999998643 37999999999999866 9999999999999999999999873
Q ss_pred -cHH
Q 005740 666 -RLY 668 (680)
Q Consensus 666 -g~Y 668 (680)
..|
T Consensus 229 ~~~~ 232 (239)
T d1v43a3 229 NSVF 232 (239)
T ss_dssp SBHH
T ss_pred CCHH
Confidence 344
No 10
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=100.00 E-value=1.9e-56 Score=450.52 Aligned_cols=219 Identities=31% Similarity=0.476 Sum_probs=192.0
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC---HHHhh
Q 005740 434 HVQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLD---IRWLR 510 (680)
Q Consensus 434 ~I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~---~~~LR 510 (680)
.|+++||+++|+.+ +..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|++||+|+.+.+ ....|
T Consensus 3 ~i~v~nlsk~y~~g-~~~aL~~vsl~i~~Ge~~~iiG~sGsGKSTll~~i~gl~~p~~G~I~~~g~~i~~~~~~~~~~~r 81 (242)
T d1oxxk2 3 RIIVKNVSKVFKKG-KVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPED 81 (242)
T ss_dssp CEEEEEEEEEEGGG-TEEEEEEEEEEECTTCEEEEECSCHHHHHHHHHHHHTSSCCSEEEEEETTEEEEETTEESSCGGG
T ss_pred EEEEEeEEEEECCC-CEEEEeceEEEECCCCEEEEECCCCCcHHHHHHHHHcCcCCCCceEEECCEEeecCchhhcchhh
Confidence 58999999999743 357999999999999999999999999999999999999999999999999998766 45568
Q ss_pred ccEEEEccCCcCcc-ccHHHHHhcCCC-CCCCH----HHHHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHH
Q 005740 511 EKIGFVGQEPQLLQ-MDIKSNIMYGCP-KDVKN----EDIEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIA 584 (680)
Q Consensus 511 ~~I~~V~Qd~~LF~-gTI~eNI~~g~~-~~~s~----eei~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIA 584 (680)
++||||+|++.||. -||+|||.++.. ...+. +.+.++++.+++.++..+.|. .||||||||+|||
T Consensus 82 r~ig~vfQ~~~L~p~ltv~eni~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~p~---------~LSGGqkQRvaiA 152 (242)
T d1oxxk2 82 RKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPR---------ELSGAQQQRVALA 152 (242)
T ss_dssp SCEEEEETTSCCCTTSCHHHHHHGGGTTSSCCHHHHHHHHHHHHHHTTCGGGTTSCGG---------GSCHHHHHHHHHH
T ss_pred ccceEEeccccccccccHHHHhhhhhHhhcCCHHHHHHHHHHHHhhcChHhhhhCChh---------hCCHHHHhHHHHH
Confidence 89999999999995 599999998732 12443 346677777777665555443 5999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhh-cCEEEEEeCCEEEEecChHHHhh
Q 005740 585 RAILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKA-VDRIVVIDDGRIIEVGNHAELLH 663 (680)
Q Consensus 585 RAll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~-aD~I~vl~~G~Ive~Gth~eLl~ 663 (680)
|||+.+|+|||||||||+||+.+...|++.|+++.++ .|.|+|+|||.++.+.. ||||++|++|+|++.|+++|+.+
T Consensus 153 RaL~~~P~llllDEPt~~LD~~~~~~i~~~i~~l~~~--~g~tvi~vTHd~~~~~~~~dri~vm~~G~iv~~g~~~el~~ 230 (242)
T d1oxxk2 153 RALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSR--LGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYD 230 (242)
T ss_dssp HHHTTCCSEEEEESTTTTSCGGGHHHHHHHHHHHHHH--HCCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHH
T ss_pred hHHhhcccceeecCCccCCCHHHHHHHHHHHHHHHhc--cCCEEEEEECCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999999998643 37899999999998755 99999999999999999999997
Q ss_pred c
Q 005740 664 K 664 (680)
Q Consensus 664 ~ 664 (680)
+
T Consensus 231 ~ 231 (242)
T d1oxxk2 231 N 231 (242)
T ss_dssp S
T ss_pred C
Confidence 6
No 11
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=8.6e-56 Score=443.75 Aligned_cols=213 Identities=34% Similarity=0.502 Sum_probs=179.3
Q ss_pred EEEEEEEEEcCCCCC-CCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHh----
Q 005740 435 VQFVNISFHYPSRPT-VPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWL---- 509 (680)
Q Consensus 435 I~f~nVsF~Y~~~~~-~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~L---- 509 (680)
|+++||+++|+.+.. ..+|+||||+|++||.+||+||||||||||+++|.|+++|++|+|++||+|+.+++.+++
T Consensus 2 I~i~nlsk~y~~~~~~~~al~~isl~i~~Ge~~~iiG~sGsGKSTLl~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~~~r 81 (230)
T d1l2ta_ 2 IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIR 81 (230)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEeEEEEeCCCCeeEEEEeceEEEEcCCCEEEEECCCCCCcchhhHhccCCCCCCcceeEECCEEcCcCChhhcchhh
Confidence 799999999975321 237999999999999999999999999999999999999999999999999999998876
Q ss_pred hccEEEEccCCcCc-cccHHHHHhcCC----CCCCCHHHHH----HHHHHhcHHHHHHcCCCC-cccccCCCCCChHHHH
Q 005740 510 REKIGFVGQEPQLL-QMDIKSNIMYGC----PKDVKNEDIE----WAAKQAYVHEFILSLPCG-YETLVDDDLLSGGQKQ 579 (680)
Q Consensus 510 R~~I~~V~Qd~~LF-~gTI~eNI~~g~----~~~~s~eei~----~A~~~a~l~dfI~~LP~G-~dT~vge~~LSGGQrQ 579 (680)
|++||||+|++.|| +-||+||+.++. .+..+.++.. +.++..+ ||+. .+... .+|||||||
T Consensus 82 ~~~ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~~~~~~p--~~LSGGqkQ 152 (230)
T d1l2ta_ 82 RDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAE-------LEERFANHKP--NQLSGGQQQ 152 (230)
T ss_dssp HHHEEEECTTCCCCTTSCHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHTT-------CCGGGTTCCG--GGSCHHHHH
T ss_pred cceEEEEecchhhCcCccHHHHHhHHHHHhccCCCCHHHHHHHHHHHHHhhc-------hhhhhhcCCh--hhCCHHHHH
Confidence 46799999999998 569999998752 1234444332 2333333 2322 12112 269999999
Q ss_pred HHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEEEEeCCEEEEecCh
Q 005740 580 RIAIARAILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIVVIDDGRIIEVGNH 658 (680)
Q Consensus 580 RIaIARAll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~vl~~G~Ive~Gth 658 (680)
|+||||||+.+|+|||||||||+||+.+.+.|++.|.++.++ .|+|+|+|||+++.++.||||++|++|+|+|+|+.
T Consensus 153 RvaIAraL~~~P~lLllDEPTs~LD~~~~~~i~~~l~~l~~~--~g~tii~vTHd~~~a~~~drv~~m~~G~Iv~~g~~ 229 (230)
T d1l2ta_ 153 RVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEE--DGKTVVVVTHDINVARFGERIIYLKDGEVEREEKL 229 (230)
T ss_dssp HHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHT--TCCEEEEECSCHHHHTTSSEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHh--hCCEEEEECCCHHHHHhCCEEEEEECCEEEEeccC
Confidence 999999999999999999999999999999999999998653 47999999999999999999999999999999863
No 12
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=8.8e-56 Score=445.97 Aligned_cols=219 Identities=31% Similarity=0.470 Sum_probs=191.1
Q ss_pred EEEEEEEEEcCCCCC-CCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHH---hh
Q 005740 435 VQFVNISFHYPSRPT-VPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRW---LR 510 (680)
Q Consensus 435 I~f~nVsF~Y~~~~~-~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~---LR 510 (680)
|+++||+++|+++.. ..||+||||+|++||.+||+||||||||||+++|.|+.+|++|+|++||+|+.+++.++ +|
T Consensus 2 i~v~nlsk~y~~~~~~~~al~~vsl~i~~Ge~~~iiG~sGsGKSTLl~~i~Gl~~p~sG~I~~~g~~i~~~~~~~~~~~r 81 (240)
T d3dhwc1 2 IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKAR 81 (240)
T ss_dssp EEEEEEEEEEECSSCEEEEEEEEEEEECSSCEEEEEESTTSSHHHHHHHHTTSSCCSEEEEEETTEEECTTCHHHHHHHH
T ss_pred EEEEeEEEEeCCCCeeEEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHcCCccccCCceEEcCeEeeeCChhhhhhhh
Confidence 789999999975422 24799999999999999999999999999999999999999999999999999988765 56
Q ss_pred ccEEEEccCCcCcc-ccHHHHHhcCCC-CCCC----HHHHHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHH
Q 005740 511 EKIGFVGQEPQLLQ-MDIKSNIMYGCP-KDVK----NEDIEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIA 584 (680)
Q Consensus 511 ~~I~~V~Qd~~LF~-gTI~eNI~~g~~-~~~s----~eei~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIA 584 (680)
++||||||++.||. -||+|||.++.. ...+ ++++.++++.+++.++..+.| ..||||||||+|||
T Consensus 82 r~ig~VfQ~~~l~~~~tv~eni~~~l~~~~~~~~~~~~~v~~~L~~vgL~~~~~~~~---------~~LSGG~~QRvaiA 152 (240)
T d3dhwc1 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYP---------SNLSGGQKQRVAIA 152 (240)
T ss_dssp HHEEECCSSCCCCTTSBHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHSTTTTTSSCB---------SCCCHHHHHHHHHH
T ss_pred ccccccccccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh---------hhCCHHHHHHHHHh
Confidence 78999999999995 599999988520 1122 356778888887765443333 26999999999999
Q ss_pred HHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhh-cCEEEEEeCCEEEEecChHHHhh
Q 005740 585 RAILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKA-VDRIVVIDDGRIIEVGNHAELLH 663 (680)
Q Consensus 585 RAll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~-aD~I~vl~~G~Ive~Gth~eLl~ 663 (680)
|||+.+|+|||||||||+||+.+.+.|++.|+++.++ .|.|+|+|||.+..+.. ||||+||++|+|+|.|+++|+++
T Consensus 153 raL~~~P~lLllDEPt~~LD~~~~~~i~~~l~~l~~~--~g~tvi~vTHdl~~~~~~~dri~vl~~G~iv~~G~~~ei~~ 230 (240)
T d3dhwc1 153 RALASNPKVLLCDEATSALDPATTRSILELLKDINRR--LGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFS 230 (240)
T ss_dssp HHHHTCCSEEEEESGGGSSCHHHHHHHHHHHHHHHHH--HCCEEEEEBSCHHHHHHHCSEEEEEETTEEEEEEETTTTTC
T ss_pred hhhccCCCeEEeccccccCCHHHhhHHHHHHHHHHhc--cCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999998653 37999999999999876 99999999999999999999987
Q ss_pred c
Q 005740 664 K 664 (680)
Q Consensus 664 ~ 664 (680)
+
T Consensus 231 ~ 231 (240)
T d3dhwc1 231 H 231 (240)
T ss_dssp S
T ss_pred C
Confidence 5
No 13
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=100.00 E-value=6e-56 Score=447.21 Aligned_cols=221 Identities=29% Similarity=0.453 Sum_probs=192.7
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHh----
Q 005740 434 HVQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWL---- 509 (680)
Q Consensus 434 ~I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~L---- 509 (680)
.|+++||+++|++ .+||+||||+|++||++||+||||||||||+++|.|+++|++|+|++||.|+.+.+...+
T Consensus 3 ~i~v~nl~k~yg~---~~al~~vsl~i~~Ge~~~liG~sGaGKSTll~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~~~~ 79 (240)
T d1g2912 3 GVRLVDVWKVFGE---VTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPK 79 (240)
T ss_dssp EEEEEEEEEEETT---EEEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHHTSSCCSEEEEEETTEEEEEGGGTEECCGG
T ss_pred cEEEEeEEEEECC---EEEEcceeeEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEEecccchhhhcccc
Confidence 4899999999963 469999999999999999999999999999999999999999999999999988776553
Q ss_pred hccEEEEccCCcCcc-ccHHHHHhcCCC-CCCCH----HHHHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHH
Q 005740 510 REKIGFVGQEPQLLQ-MDIKSNIMYGCP-KDVKN----EDIEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAI 583 (680)
Q Consensus 510 R~~I~~V~Qd~~LF~-gTI~eNI~~g~~-~~~s~----eei~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaI 583 (680)
|++||||+|++.||. -||+||+.++.. ...+. +.+.++++..++.++..+.| ..||||||||++|
T Consensus 80 ~r~ig~v~Q~~~L~~~ltV~eni~~~~~~~~~~~~e~~~~v~~~l~~~~l~~~~~~~p---------~~LSGGqkQRv~I 150 (240)
T d1g2912 80 DRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKP---------RELSGGQRQRVAL 150 (240)
T ss_dssp GSSEEEECSCCCCCTTSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTCGGGTTCCG---------GGSCHHHHHHHHH
T ss_pred cccceecccchhhcchhhhhHhhhhhHHHcCCCHHHHHHHHHHHHHHcCChhHhcCCh---------hhCCHHHHHHHHH
Confidence 788999999999995 599999998631 12333 34677777777766554444 3699999999999
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhh-cCEEEEEeCCEEEEecChHHHh
Q 005740 584 ARAILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKA-VDRIVVIDDGRIIEVGNHAELL 662 (680)
Q Consensus 584 ARAll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~-aD~I~vl~~G~Ive~Gth~eLl 662 (680)
||||+.+|+|||||||||+||+.+...|++.|+++.++ .|.|+|+|||+++.+.. ||||+||++|+|++.|+++|++
T Consensus 151 AraL~~~P~iLllDEPt~~LD~~~~~~i~~~l~~l~~~--~g~tvi~vTHd~~~~~~~~drv~vm~~G~iv~~G~~~el~ 228 (240)
T d1g2912 151 GRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQ--LGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVY 228 (240)
T ss_dssp HHHHHTCCSEEEEECTTTTSCHHHHHHHHHHHHHHHHH--HTCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHhcCCCEEEecCCCcccCHHHHHHHHHHHHHHHhc--cCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999998643 37999999999999876 9999999999999999999999
Q ss_pred hc-CcHH
Q 005740 663 HK-GRLY 668 (680)
Q Consensus 663 ~~-~g~Y 668 (680)
++ ...|
T Consensus 229 ~~P~~~~ 235 (240)
T d1g2912 229 DKPANTF 235 (240)
T ss_dssp HSCSBHH
T ss_pred hCCCCHH
Confidence 76 3344
No 14
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=100.00 E-value=3.6e-53 Score=433.10 Aligned_cols=226 Identities=29% Similarity=0.459 Sum_probs=193.4
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC--------
Q 005740 434 HVQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLD-------- 505 (680)
Q Consensus 434 ~I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~-------- 505 (680)
.|+++||+++|++ .+||+||||+|++||++||+||||||||||+++|.|+++|++|+|++||.|+...+
T Consensus 2 ~Lev~nl~k~yg~---~~al~~vs~~i~~GEi~~iiG~sGsGKSTLl~~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~~ 78 (258)
T d1b0ua_ 2 KLHVIDLHKRYGG---HEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKV 78 (258)
T ss_dssp CEEEEEEEEEETT---EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEECCEEECTTSSEEE
T ss_pred eEEEEEEEEEECC---EEEEcceeeEEcCCCEEEEECCCCCcHHHHHHHHHcCccCCCCCEEECCEEeccCCccchhccc
Confidence 4899999999963 46999999999999999999999999999999999999999999999999997553
Q ss_pred -----HHHhhccEEEEccCCcCcc-ccHHHHHhcCC--CCCCCH----HHHHHHHHHhcHHHHHH-cCCCCcccccCCCC
Q 005740 506 -----IRWLREKIGFVGQEPQLLQ-MDIKSNIMYGC--PKDVKN----EDIEWAAKQAYVHEFIL-SLPCGYETLVDDDL 572 (680)
Q Consensus 506 -----~~~LR~~I~~V~Qd~~LF~-gTI~eNI~~g~--~~~~s~----eei~~A~~~a~l~dfI~-~LP~G~dT~vge~~ 572 (680)
...+|++||||+|++.||. .|+.||+.++. ....+. +.+.++++.+++.+... +.| .+
T Consensus 79 ~~~~~~~~~r~~ig~vfQ~~~l~~~~tv~env~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~p---------~~ 149 (258)
T d1b0ua_ 79 ADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYP---------VH 149 (258)
T ss_dssp SCHHHHHHHHHHEEEECSSCCCCTTSCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCHHHHTSCG---------GG
T ss_pred ccHhHHHHHhcceEEEEechhhccchhcchhhhhhHHHhcCCCHHHHHHHHHHHHHHcCCchhhhccCc---------cc
Confidence 3457899999999999995 69999998761 122333 34666777777755443 333 25
Q ss_pred CChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhh-cCEEEEEeCCE
Q 005740 573 LSGGQKQRIAIARAILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKA-VDRIVVIDDGR 651 (680)
Q Consensus 573 LSGGQrQRIaIARAll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~-aD~I~vl~~G~ 651 (680)
||||||||++|||||+.+|++||||||||+||+.+.+.|.+.|+++.+ +|+|+|+|||.+..+.. ||||+||++|+
T Consensus 150 LSGG~~QRv~iAraL~~~P~llilDEPT~gLD~~~~~~i~~ll~~l~~---~g~til~vtHdl~~~~~~adri~vm~~G~ 226 (258)
T d1b0ua_ 150 LSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAE---EGKTMVVVTHEMGFARHVSSHVIFLHQGK 226 (258)
T ss_dssp SCHHHHHHHHHHHHHHTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHCSEEEEEETTE
T ss_pred ccHHHHHHHHHHHHHhcCCCEEEeccccccCCHHHHHHHHHhhhhhcc---cCCceEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999875 47999999999999876 99999999999
Q ss_pred EEEecChHHHhhc--CcHHHHHHHH
Q 005740 652 IIEVGNHAELLHK--GRLYAKLVKR 674 (680)
Q Consensus 652 Ive~Gth~eLl~~--~g~Y~~L~~~ 674 (680)
|+|.|+++|++++ +.+-++++..
T Consensus 227 iv~~g~~~ev~~~P~~~~~~~ll~~ 251 (258)
T d1b0ua_ 227 IEEEGDPEQVFGNPQSPRLQQFLKG 251 (258)
T ss_dssp EEEEECHHHHHHSCCSHHHHHHHHH
T ss_pred EEEEcCHHHHHhCCCCHHHHHHHhC
Confidence 9999999999986 3334555543
No 15
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=100.00 E-value=3e-52 Score=422.49 Aligned_cols=221 Identities=21% Similarity=0.375 Sum_probs=185.1
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhc-c
Q 005740 434 HVQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLRE-K 512 (680)
Q Consensus 434 ~I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~-~ 512 (680)
-|+++||+++|++ ..||+||||+|++||++||+||||||||||+++|+|+++|++|+|++||.|+.+.+.+..++ .
T Consensus 6 ~Lev~~l~k~yg~---~~al~~vs~~i~~Gei~~liGpnGaGKSTl~~~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~r~g 82 (240)
T d1ji0a_ 6 VLEVQSLHVYYGA---IHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMG 82 (240)
T ss_dssp EEEEEEEEEEETT---EEEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHTT
T ss_pred EEEEeeEEEEECC---EEEEeeeeEEECCCCEEEEECCCCCcHHHHHHHHhCCCCCCccEEEecccccccccHHHHHHhc
Confidence 4799999999964 46999999999999999999999999999999999999999999999999999998887644 4
Q ss_pred EEEEccCCcCcc-ccHHHHHhcCCCCCCCHHHHHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHHHHHccCC
Q 005740 513 IGFVGQEPQLLQ-MDIKSNIMYGCPKDVKNEDIEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIARAILRDP 591 (680)
Q Consensus 513 I~~V~Qd~~LF~-gTI~eNI~~g~~~~~s~eei~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIARAll~~p 591 (680)
|+|+||++.+|. -|++||+.++.......++..+.++.+- ..| ..+.+-.+..+ .+||||||||++|||||+.+|
T Consensus 83 i~~~~q~~~l~~~ltv~en~~~~~~~~~~~~~~~~~~~~~~-~~~-~~l~~~~~~~~--~~LSGG~~Qrv~iAraL~~~P 158 (240)
T d1ji0a_ 83 IALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIF-SLF-PRLKERLKQLG--GTLSGGEQQMLAIGRALMSRP 158 (240)
T ss_dssp EEEECSSCCCCTTSBHHHHHHGGGTTCCCSSHHHHHHHHHH-HHC-HHHHTTTTSBS--SSSCHHHHHHHHHHHHHTTCC
T ss_pred ccccCcccccCCcccHHHHHHHHHHhcCCHHHHHHHHHHHH-HHh-hChHHHHhCch--hhCCHHHHHHHHHHHHHHhCC
Confidence 999999999996 5999999887432223333333332221 011 11112223222 369999999999999999999
Q ss_pred CeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhh-cCEEEEEeCCEEEEecChHHHhhc
Q 005740 592 AILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKA-VDRIVVIDDGRIIEVGNHAELLHK 664 (680)
Q Consensus 592 ~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~-aD~I~vl~~G~Ive~Gth~eLl~~ 664 (680)
++|||||||++||+.+.+.|.+.|+++.+ +|+|+|+|+|.++.+.. ||||+||++|+|+++|+++|++++
T Consensus 159 ~lLllDEPt~gLD~~~~~~i~~~i~~l~~---~g~til~~tH~l~~~~~~~drv~vl~~G~iv~~g~~~el~~~ 229 (240)
T d1ji0a_ 159 KLLMMDEPSLGLAPILVSEVFEVIQKINQ---EGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDN 229 (240)
T ss_dssp SEEEEECTTTTCCHHHHHHHHHHHHHHHH---TTCCEEEEESCHHHHHHHCSEEEEEETTEEEEEEEHHHHHTC
T ss_pred CEeeecCCCcCCCHHHHHHHHHHHHHHHh---CCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHhcC
Confidence 99999999999999999999999999864 48999999999988765 999999999999999999999875
No 16
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=1.1e-51 Score=422.26 Aligned_cols=219 Identities=26% Similarity=0.420 Sum_probs=182.3
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhcc-
Q 005740 434 HVQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREK- 512 (680)
Q Consensus 434 ~I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~- 512 (680)
-|+++||+++|++ .+||+||||+|++||++||+||||||||||+++|+|+++|++|+|++||.|+...+..+.++.
T Consensus 4 iL~v~nlsk~yg~---~~aL~~vs~~v~~Gei~~liG~nGaGKSTLl~~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~g 80 (254)
T d1g6ha_ 4 ILRTENIVKYFGE---FKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYG 80 (254)
T ss_dssp EEEEEEEEEEETT---EEEEEEECCEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHT
T ss_pred eEEEEEEEEEECC---eEEEcceEEEECCCCEEEEECCCCCcHHHHHHHHHCCCcCCCcEEEECCEeccchhHHHHHHhc
Confidence 4899999999964 469999999999999999999999999999999999999999999999999999999987665
Q ss_pred EEEEccCCcCc-cccHHHHHhcCCCC--------------CCCHHHHHHHHHHhcHHHHHHcCCCCcccccCCCCCChHH
Q 005740 513 IGFVGQEPQLL-QMDIKSNIMYGCPK--------------DVKNEDIEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQ 577 (680)
Q Consensus 513 I~~V~Qd~~LF-~gTI~eNI~~g~~~--------------~~s~eei~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQ 577 (680)
|++|||++.+| +-|++|||.+|... ...+++..+.+.. +-+++ .+.+-.|..++ +|||||
T Consensus 81 i~~v~Q~~~~~~~ltv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~-~l~~~~~~~~~--~LSgG~ 155 (254)
T d1g6ha_ 81 IVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFK--ILEFL-KLSHLYDRKAG--ELSGGQ 155 (254)
T ss_dssp EEECCCCCGGGGGSBHHHHHHGGGTSTTSCHHHHHHHCSSCCCCHHHHHHHHH--HHHHT-TCGGGTTSBGG--GSCHHH
T ss_pred CCccCCccccCCCCeeeeeeeehhhhccccchhhhhhhcccccHHHHHHHHHH--HHHhc-CcchhccCchh--hCCcHH
Confidence 99999999988 57999999987310 1122222221111 11111 11111222222 699999
Q ss_pred HHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhh-cCEEEEEeCCEEEEec
Q 005740 578 KQRIAIARAILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKA-VDRIVVIDDGRIIEVG 656 (680)
Q Consensus 578 rQRIaIARAll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~-aD~I~vl~~G~Ive~G 656 (680)
|||++|||||+.+|++|||||||++||+.+.+.|.+.|+++++ +|+|+|+|+|+++.+.. ||||+||++|+|+++|
T Consensus 156 ~Qrv~iAraL~~~P~llilDEPt~gLD~~~~~~i~~~i~~l~~---~g~til~vsHdl~~~~~~~Drv~vm~~G~iv~~g 232 (254)
T d1g6ha_ 156 MKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKA---KGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEG 232 (254)
T ss_dssp HHHHHHHHHHHTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHH---TTCEEEEECSCCSTTGGGCSEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHhCcCchhhcCCcccCCHHHHHHHHHHHHHHHH---CCCEEEEEeCcHHHHHHhCCEEEEEeCCEEEEEe
Confidence 9999999999999999999999999999999999999999864 48999999999999855 9999999999999999
Q ss_pred ChHHHhh
Q 005740 657 NHAELLH 663 (680)
Q Consensus 657 th~eLl~ 663 (680)
+++|+.+
T Consensus 233 ~~~e~~~ 239 (254)
T d1g6ha_ 233 RGEEEIK 239 (254)
T ss_dssp ESHHHHH
T ss_pred cHHHHhh
Confidence 9999865
No 17
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=2.6e-51 Score=414.78 Aligned_cols=216 Identities=26% Similarity=0.408 Sum_probs=186.2
Q ss_pred ccEEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhcc
Q 005740 433 GHVQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREK 512 (680)
Q Consensus 433 g~I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~ 512 (680)
|.|+++||+++|.+ ++||+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+.+ ....+|+.
T Consensus 1 gaI~v~nl~k~yg~---~~vl~~vs~~v~~Gei~glvG~nGaGKSTLl~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~~~ 76 (238)
T d1vpla_ 1 GAVVVKDLRKRIGK---KEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVE-EPHEVRKL 76 (238)
T ss_dssp CCEEEEEEEEEETT---EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEETTT-CHHHHHTT
T ss_pred CCEEEEeEEEEECC---EEEEccceeEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCCEEEECcEeccc-ChHHHHhh
Confidence 57999999999964 479999999999999999999999999999999999999999999999999987 45688999
Q ss_pred EEEEccCCcCc-cccHHHHHhcCCC-CCCCHHHHHH----HHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHHHH
Q 005740 513 IGFVGQEPQLL-QMDIKSNIMYGCP-KDVKNEDIEW----AAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIARA 586 (680)
Q Consensus 513 I~~V~Qd~~LF-~gTI~eNI~~g~~-~~~s~eei~~----A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIARA 586 (680)
+|||||++.+| +-|++||+.|... ...+++++.+ +++..++.++. +..+ ++||||||||++||||
T Consensus 77 i~~vpq~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~--~~lSgG~~qrv~iA~a 147 (238)
T d1vpla_ 77 ISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATEIAGLGEKI-------KDRV--STYSKGMVRKLLIARA 147 (238)
T ss_dssp EEEECTTCCCCTTSBHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCGGGG-------GSBG--GGCCHHHHHHHHHHHH
T ss_pred EeEeeeccccCCCccHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCHHHH-------hhhh--hhCCHHHHHHHHHHHH
Confidence 99999999999 4599999976421 1234454444 44444433332 2222 2699999999999999
Q ss_pred HccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhh-cCEEEEEeCCEEEEecChHHHhhc
Q 005740 587 ILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKA-VDRIVVIDDGRIIEVGNHAELLHK 664 (680)
Q Consensus 587 ll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~-aD~I~vl~~G~Ive~Gth~eLl~~ 664 (680)
|+.+|+||||||||++||+.+.+.|.+.++++.+ +|+|+|++||.++.+.. ||||+||++|+|++.|+++||.++
T Consensus 148 l~~~p~illLDEPt~gLD~~~~~~i~~~i~~~~~---~g~tii~~tH~l~~~~~~~drv~vl~~G~iv~~g~~~el~~~ 223 (238)
T d1vpla_ 148 LMVNPRLAILDEPTSGLDVLNAREVRKILKQASQ---EGLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKER 223 (238)
T ss_dssp HTTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHH---TTCEEEEEECCHHHHTTTCSEEEEEETTEEEEEEEHHHHHHH
T ss_pred HhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHh---cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhc
Confidence 9999999999999999999999999999999874 48999999999999886 999999999999999999999865
No 18
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=100.00 E-value=4.8e-51 Score=410.01 Aligned_cols=217 Identities=28% Similarity=0.480 Sum_probs=182.2
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEE
Q 005740 435 VQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIG 514 (680)
Q Consensus 435 I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~ 514 (680)
+++ ++..+|.+ ..+ ||||+++ ||.+||+||||||||||+++|.|+++|++|+|.+||+|+.+++.. |++||
T Consensus 3 l~v-~~~k~~g~----~~~-~vs~~~~-~e~~~liGpnGaGKSTll~~i~Gl~~p~~G~I~~~G~~i~~~~~~--~r~ig 73 (240)
T d2onka1 3 LKV-RAEKRLGN----FRL-NVDFEMG-RDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPE--RRGIG 73 (240)
T ss_dssp EEE-EEEEEETT----EEE-EEEEEEC-SSEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCTT--TSCCB
T ss_pred EEE-EEEEEECC----EEE-EEEEEeC-CEEEEEECCCCChHHHHHHHHHcCCCCCceEEEECCEECCcCCHH--HcCce
Confidence 445 45677743 124 8999995 689999999999999999999999999999999999999988764 78999
Q ss_pred EEccCCcCcc-ccHHHHHhcCCCCCCCHHH----HHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHHHHHcc
Q 005740 515 FVGQEPQLLQ-MDIKSNIMYGCPKDVKNED----IEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIARAILR 589 (680)
Q Consensus 515 ~V~Qd~~LF~-gTI~eNI~~g~~~~~s~ee----i~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIARAll~ 589 (680)
||||++.||. -||+|||.||. ...+.++ +.++++..++.++..+.| ..||||||||+||||||+.
T Consensus 74 ~v~Q~~~l~~~ltV~enl~~~l-~~~~~~~~~~~v~~~l~~~gl~~~~~~~~---------~~LSGG~kQRvaiAral~~ 143 (240)
T d2onka1 74 FVPQDYALFPHLSVYRNIAYGL-RNVERVERDRRVREMAEKLGIAHLLDRKP---------ARLSGGERQRVALARALVI 143 (240)
T ss_dssp CCCSSCCCCTTSCHHHHHHTTC-TTSCHHHHHHHHHHHHHTTTCTTTTTCCG---------GGSCHHHHHHHHHHHHHTT
T ss_pred eeccchhhcccchhhHhhhhhh-cccCHHHHHHHHHHHHHhcCcHhhhhCCh---------hhCCHHHHHHHHHHHHHhc
Confidence 9999999995 69999999984 4555443 455555555544443333 3699999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhh-cCEEEEEeCCEEEEecChHHHhhc-CcH
Q 005740 590 DPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKA-VDRIVVIDDGRIIEVGNHAELLHK-GRL 667 (680)
Q Consensus 590 ~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~-aD~I~vl~~G~Ive~Gth~eLl~~-~g~ 667 (680)
+|+||+||||||+||+.+...|.+.|+++.++ .|.|+|+|||.+..+.. ||||+||++|+|++.|+++|+++. +..
T Consensus 144 ~P~illlDEPts~LD~~~~~~i~~~i~~l~~~--~g~tvi~vtHd~~~~~~~adri~vm~~G~ii~~G~~~el~~~~~~~ 221 (240)
T d2onka1 144 QPRLLLLDEPLSAVDLKTKGVLMEELRFVQRE--FDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSAKNGE 221 (240)
T ss_dssp CCSSBEEESTTSSCCHHHHHHHHHHHHHHHHH--HTCCEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHSCCSS
T ss_pred cCCceEecCccccCCHHHHHHHHHHHHHHHHh--cCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEEecHHHHhcCCCHH
Confidence 99999999999999999999999999998643 37899999999998776 999999999999999999999975 444
Q ss_pred HHHHH
Q 005740 668 YAKLV 672 (680)
Q Consensus 668 Y~~L~ 672 (680)
.++++
T Consensus 222 v~~fl 226 (240)
T d2onka1 222 VAEFL 226 (240)
T ss_dssp HHHHG
T ss_pred HHHHh
Confidence 55554
No 19
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.2e-47 Score=386.94 Aligned_cols=211 Identities=21% Similarity=0.338 Sum_probs=183.9
Q ss_pred EEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEE
Q 005740 435 VQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIG 514 (680)
Q Consensus 435 I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~ 514 (680)
++++||+++| +|+||||+|++||++||+||||||||||+++|.|++ |++|+|+++|.|+..++...++.+.+
T Consensus 4 l~~~dv~~~~-------~l~~isl~I~~Gei~~iiG~nGaGKSTLl~~l~Gl~-~~~G~I~~~g~~i~~~~~~~~~~~~~ 75 (231)
T d1l7vc_ 4 MQLQDVAEST-------RLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMT-SGKGSIQFAGQPLEAWSATKLALHRA 75 (231)
T ss_dssp EEEEEECCTT-------TSCSEEEEEETTCEEECBCCTTSSHHHHHHHHHTSC-CCSSEEEESSSBGGGSCHHHHHHHEE
T ss_pred EEEECcccCc-------eecCEEEEEcCCCEEEEECCCCCcHHHHHHHHhCCC-CCceEEEECCEECCcCCHHHHHhhce
Confidence 7899997554 699999999999999999999999999999999986 68999999999999999999999999
Q ss_pred EEccCCc-CccccHHHHHhcCCCCCCCHHHHHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHHHHHcc----
Q 005740 515 FVGQEPQ-LLQMDIKSNIMYGCPKDVKNEDIEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIARAILR---- 589 (680)
Q Consensus 515 ~V~Qd~~-LF~gTI~eNI~~g~~~~~s~eei~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIARAll~---- 589 (680)
|++|+.. .|..++.+|+.++..+....|.+.++++..++.+++.+ .+ .+||||||||++||||+++
T Consensus 76 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~--~~LSgG~~Qrv~iA~al~~~~p~ 146 (231)
T d1l7vc_ 76 YLSQQQTPPFATPVWHYLTLHQHDKTRTELLNDVAGALALDDKLGR-------ST--NQLSGGEWQRVRLAAVVLQITPQ 146 (231)
T ss_dssp EECSCCCCCSSCBHHHHHHHHCSCTTCHHHHHHHHHHTTCTTTTTS-------BG--GGCCHHHHHHHHHHHHHHHHCTT
T ss_pred eeeccccCCccccHHHHhhhccchhhHHHHHHHHHHhcCCHhHhCc-------Ch--hhcCHHHHHHHHHHHHHHhhCcc
Confidence 9999887 57889999999885433445566777777665443221 11 2699999999999999997
Q ss_pred ---CCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchH-hhcCEEEEEeCCEEEEecChHHHhhcC
Q 005740 590 ---DPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTI-KAVDRIVVIDDGRIIEVGNHAELLHKG 665 (680)
Q Consensus 590 ---~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti-~~aD~I~vl~~G~Ive~Gth~eLl~~~ 665 (680)
+|+|||||||||+||+.+.+.|.+.|+++.+ +|+|+|+|+|+++.+ +.||||+||++|+|++.|+++|++...
T Consensus 147 ~~p~p~llllDEPt~gLD~~~~~~i~~~i~~l~~---~g~tii~vtHdl~~~~~~~dri~vl~~G~iv~~G~~~ev~~~~ 223 (231)
T d1l7vc_ 147 ANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQ---QGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVLTPP 223 (231)
T ss_dssp TCTTCCEEEESSCSTTCCHHHHHHHHHHHHHHHH---TTCEEEECCCCHHHHHHHCSBCCBEETTEECCCSBHHHHSCHH
T ss_pred cCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh---CCCEEEEEeCCHHHHHHHCCEEEEEECCEEEEECCHHHHhCCh
Confidence 7799999999999999999999999999875 489999999999875 459999999999999999999998654
No 20
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00 E-value=3.6e-44 Score=353.82 Aligned_cols=192 Identities=23% Similarity=0.371 Sum_probs=160.1
Q ss_pred cEEEEEEEEEcCCCCCCCcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccE
Q 005740 434 HVQFVNISFHYPSRPTVPILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKI 513 (680)
Q Consensus 434 ~I~f~nVsF~Y~~~~~~~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I 513 (680)
.|+++||||+|+ ++||+||||+|++||.+||+||||||||||+++|+|+++|++|+|.+||+++. .+|.++
T Consensus 2 ~lev~~ls~~y~----~~vl~~is~~i~~Gei~~l~G~NGsGKSTLl~~i~gl~~p~~G~I~~~g~~i~-----~~~~~i 72 (200)
T d1sgwa_ 2 KLEIRDLSVGYD----KPVLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPIT-----KVKGKI 72 (200)
T ss_dssp EEEEEEEEEESS----SEEEEEEEEEEETTCCEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEEGG-----GGGGGE
T ss_pred eEEEEEEEEEeC----CeEEeceEEEEcCCCEEEEECCCCChHHHHHHHHhcccccCCCEEEECCEehh-----HhcCcE
Confidence 489999999994 36999999999999999999999999999999999999999999999999986 468899
Q ss_pred EEEccCCcCcc-ccHHHHHhcCC---CCCCCHHHHHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHHHHHcc
Q 005740 514 GFVGQEPQLLQ-MDIKSNIMYGC---PKDVKNEDIEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIARAILR 589 (680)
Q Consensus 514 ~~V~Qd~~LF~-gTI~eNI~~g~---~~~~s~eei~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIARAll~ 589 (680)
+|+||++.++. -|++||+.+.. ..+.+++++.++++..++.+ ++..++ +||||||||++||||++.
T Consensus 73 ~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~~--~LSgG~~qrv~ia~al~~ 142 (200)
T d1sgwa_ 73 FFLPEEIIVPRKISVEDYLKAVASLYGVKVNKNEIMDALESVEVLD--------LKKKLG--ELSQGTIRRVQLASTLLV 142 (200)
T ss_dssp EEECSSCCCCTTSBHHHHHHHHHHHTTCCCCHHHHHHHHHHTTCCC--------TTSBGG--GSCHHHHHHHHHHHHTTS
T ss_pred EEEeecccCCCCcCHHHHHHHHHHhcCCccCHHHHHHHHHHcCCcc--------cccccC--cCCCcHHHHHHHHHHHhc
Confidence 99999999884 59999986421 13567888888877765422 233333 599999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEEEEeC
Q 005740 590 DPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIVVIDD 649 (680)
Q Consensus 590 ~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~vl~~ 649 (680)
||++|||||||++||+++++.+++.|.++.++ ++.++|...|. +..||++.+|.+
T Consensus 143 ~~~llllDEPt~gLD~~~~~~i~~~l~~~~~~--~~~~ii~~~~~---l~~~D~~~~l~~ 197 (200)
T d1sgwa_ 143 NAEIYVLDDPVVAIDEDSKHKVLKSILEILKE--KGIVIISSREE---LSYCDVNENLHK 197 (200)
T ss_dssp CCSEEEEESTTTTSCTTTHHHHHHHHHHHHHH--HSEEEEEESSC---CTTSSEEEEGGG
T ss_pred CCCEEEEcCcccccCHHHHHHHHHHHHHHHhC--CCEEEEEEech---hhhcchhhheee
Confidence 99999999999999999999999999998653 23333333343 457999998854
No 21
>d3b60a2 f.37.1.1 (A:10-328) Multidrug resistance ABC transporter MsbA, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=100.00 E-value=4e-30 Score=265.31 Aligned_cols=302 Identities=19% Similarity=0.261 Sum_probs=258.5
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005740 117 WIALSRMWNLIGRDKWIVLVAVASLIVAAVSEITMPRILAEAVFSAQR-EEAMVFHKSSRFLVLLCVTSGIFSGLRSGCF 195 (680)
Q Consensus 117 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~i~~~~~-~~~~~~~~~~~~l~~l~~~~~i~~~~~~~~~ 195 (680)
|+.+||++++++|||+.+++++++.++.+++.+..|++++..++.... .+...+......++++.++..++.+++.++.
T Consensus 1 Wk~~krl~~~~~~~k~~l~~~~i~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 80 (319)
T d3b60a2 1 WQTFRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCI 80 (319)
T ss_dssp CHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Confidence 467899999999999999999999999999999999999888875422 2222222222333344445555565555544
Q ss_pred HHHHH---------------hcchhcccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 005740 196 SIANI---------------VLDVYFFDTEAVGGLTSRLTADCQRLSNVIGNDINMILRNSLQGAGAFINLLTLSWPLTL 260 (680)
Q Consensus 196 ~~~~~---------------~l~~~ff~~~~~G~l~srl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~l~~~s~~L~l 260 (680)
..... ..|+++|+++++|++++|+++|++.++..+...+..++..++.+++++++++.++|.+++
T Consensus 81 ~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~l 160 (319)
T d3b60a2 81 SWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSI 160 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHH
T ss_pred hhhhhccccchhhHHHHhhcccchhhccccccccccccccccccccccccccccchhhhhhhhhhhHHHHHHhhhccchh
Confidence 32211 139999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005740 261 SALLICSFLSIIVSVYGQYQKRASVLTQECNAHANNVAQETLCMMRTVRVYGTEEKELGRYKIWLEKLAFIRIRESMAYG 340 (680)
Q Consensus 261 v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (680)
++++++|+..++...+.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+.....+
T Consensus 161 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (319)
T d3b60a2 161 ILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASS 240 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHhhhhHHHHHHHHHHhhhhhHHHHHHHhhcCCceeeehhccchhhhhhhhhhhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 005740 341 LWNMSFITLYRSTQVMAVLLGGMSIMIGQVSPEQLTKYVLYCEWLIYATWRMVDNLSSLLQSIGATEKVFQLIDLLPS 418 (680)
Q Consensus 341 ~~~~~~~~~~~~~~~~~l~~g~~lv~~g~is~G~l~af~~~~~~l~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~ 418 (680)
........+.....++++++|++++.+|++|+|++++++.|...+..|+..+++.+..++++.++.+|++|++|.|||
T Consensus 241 ~~~~~~~~~~~~~~~~~l~~g~~~~~~g~it~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~Ri~elld~~~E 318 (319)
T d3b60a2 241 ISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQE 318 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCS
T ss_pred hcccchhhhhhhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 776666666666777788899999999999999999999999999999999999999999999999999999998876
No 22
>d2hyda2 f.37.1.1 (A:1-323) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=99.97 E-value=4.9e-29 Score=257.83 Aligned_cols=299 Identities=17% Similarity=0.216 Sum_probs=250.2
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHH----HHHHHHHHHHHHHHHH
Q 005740 120 LSRMWNLIGRDKWIVLVAVASLIVAAVSEITMPRILAEAVFSAQREE----AMVFHKSSR----FLVLLCVTSGIFSGLR 191 (680)
Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~~~~~~i~~~~~~~----~~~~~~~~~----~l~~l~~~~~i~~~~~ 191 (680)
+||+++|++|||+.+++++++.++.+++.+..|++++..++...... ......... .++++.++..++.+++
T Consensus 2 lKrl~~~~k~~k~~~~~~~~~~~~~~~~~~~~p~l~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (323)
T d2hyda2 2 IKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIR 81 (323)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999998887542111 011111111 1112222333444444
Q ss_pred HHHHHHHH---------------HhcchhcccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 005740 192 SGCFSIAN---------------IVLDVYFFDTEAVGGLTSRLTADCQRLSNVIGNDINMILRNSLQGAGAFINLLTLSW 256 (680)
Q Consensus 192 ~~~~~~~~---------------~~l~~~ff~~~~~G~l~srl~~D~~~i~~~~~~~l~~~i~~~~~~i~~~~~l~~~s~ 256 (680)
.++..... ..+|.+||+++++|++++|+++|++.+++.+...+..++..++.+++.++++++++|
T Consensus 82 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 161 (323)
T d2hyda2 82 QYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDV 161 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhhhHHHHHHHhhhhhcccccccccccccccccccchhhhhhccchhhhhhhcchhhhhhhhhhhhhhhhhh
Confidence 43322110 124999999999999999999999999999988888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH
Q 005740 257 PLTLSALLICSFLSIIVSVYGQYQKRASVLTQECNAHANNVAQETLCMMRTVRVYGTEEKELGRYKIWLEKLAFIRIRES 336 (680)
Q Consensus 257 ~L~lv~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~ 336 (680)
+++++.++..|+..++...+.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...|..
T Consensus 162 ~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~k~~ 241 (323)
T d2hyda2 162 KLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHT 241 (323)
T ss_dssp TTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCCchhhhHhhhccchhhhhcccccccchhhHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 005740 337 MAYGLWNMSFITLYRSTQVMAVLLGGMSIMIGQVSPEQLTKYVLYCEWLIYATWRMVDNLSSLLQSIGATEKVFQLIDLL 416 (680)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~is~G~l~af~~~~~~l~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~ 416 (680)
............+..+..++++++|++++.+|.+|+|++++|+.|...+..|+..+++.+.+++++.++.+|+.|++|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~s~g~l~~~~~~~~~l~~~l~~l~~~~~~~~~~~~s~~Ri~elLd~e 321 (323)
T d2hyda2 242 RWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDED 321 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred hhhhhccccccccchhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 77777777777777777778889999999999999999999999999999999999999999999999999999999987
Q ss_pred CC
Q 005740 417 PS 418 (680)
Q Consensus 417 ~~ 418 (680)
||
T Consensus 322 ~e 323 (323)
T d2hyda2 322 YD 323 (323)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 23
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.84 E-value=1.2e-20 Score=192.76 Aligned_cols=79 Identities=27% Similarity=0.450 Sum_probs=72.7
Q ss_pred CCChHHHH------HHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEE
Q 005740 572 LLSGGQKQ------RIAIARAILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIV 645 (680)
Q Consensus 572 ~LSGGQrQ------RIaIARAll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~ 645 (680)
.+|||||| |+|+||++..+|+||+|||||++||+++.+.+.+.|+++.++ ++|+|+|||+++.+..||+|+
T Consensus 201 ~lSgGe~~~~~la~~la~~~~l~~~~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~---~~qviv~TH~~~~~~~~D~ii 277 (292)
T g1f2t.1 201 FLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKK---IPQVILVSHDEELKDAADHVI 277 (292)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHSSCSEEEEESCSCTTCHHHHHHHHHHHHHTGGG---SSEEEEEESCGGGGGGCSEEE
T ss_pred hcchHHHHHHHHHHHHHHhhhhcCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhC---CCEEEEEeecHHHHHhCCEEE
Confidence 79999999 899999999999999999999999999999999999998643 579999999999999999999
Q ss_pred EE--eCCEEE
Q 005740 646 VI--DDGRII 653 (680)
Q Consensus 646 vl--~~G~Iv 653 (680)
++ ++|...
T Consensus 278 ~l~~~~g~~~ 287 (292)
T g1f2t.1 278 RISLENGSSK 287 (292)
T ss_dssp EEEEETTEEE
T ss_pred EEEecCCEEE
Confidence 99 677653
No 24
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=99.80 E-value=1.9e-21 Score=185.23 Aligned_cols=173 Identities=14% Similarity=0.108 Sum_probs=124.2
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEEEEccCCcCccccHHHHHhcCCCCCCCHHHH
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIGFVGQEPQLLQMDIKSNIMYGCPKDVKNEDI 544 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~~LF~gTI~eNI~~g~~~~~s~eei 544 (680)
+++|+||+|||||||++.|+|+++|+.|.+.++|.+....+...........++...++..+..++.+.+. .....+..
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 80 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSKFFTSKKLVGS-YGVNVQYF 80 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGGEEEEEEEEEC------CCEEEEEETTCCEEEEEETTCCCSSEETT-EEECHHHH
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCCcceEEECCcchHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhhhh-hhcCcchh
Confidence 58999999999999999999999999999999998877665555444455566666666666655544441 11222211
Q ss_pred HHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCC
Q 005740 545 EWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIARAILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKT 624 (680)
Q Consensus 545 ~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIARAll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~ 624 (680)
.+|+|++||.++|+|+.++|++|++|||+...+. + ....+.+.+..++ .
T Consensus 81 ---------------------------~~~~~~~~~~~l~~~~~~~~~vlllDE~~~~~~~-~-~~~~~~l~~~l~~--~ 129 (178)
T d1ye8a1 81 ---------------------------EELAIPILERAYREAKKDRRKVIIIDEIGKMELF-S-KKFRDLVRQIMHD--P 129 (178)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHHHCTTCEEEECCCSTTGGG-C-HHHHHHHHHHHTC--T
T ss_pred ---------------------------hhhhhhhHHHHHHHHHhcCCCceeecCCCccchh-h-HHHHHHHHHHhcc--C
Confidence 3689999999999999999999999998655432 2 2334455554432 4
Q ss_pred CeEEEEEecCcchHhhcCEEEEEeCCEEEEecChHHHhhcCcHHHHHHH
Q 005740 625 KRTVIVIAHRLSTIKAVDRIVVIDDGRIIEVGNHAELLHKGRLYAKLVK 673 (680)
Q Consensus 625 ~~TvIvIaHRlsti~~aD~I~vl~~G~Ive~Gth~eLl~~~g~Y~~L~~ 673 (680)
++|+|+++|+.+....||+|..+++|++++-+.+ .++..+.+..+
T Consensus 130 ~~~il~~~h~~~~~~~~~~i~~~~~~~i~~v~~~----nrd~~~~~i~~ 174 (178)
T d1ye8a1 130 NVNVVATIPIRDVHPLVKEIRRLPGAVLIELTPE----NRDVILEDILS 174 (178)
T ss_dssp TSEEEEECCSSCCSHHHHHHHTCTTCEEEECCTT----TTTTHHHHHHH
T ss_pred CCEEEEEEccHHHHHhhceEEEEeCCEEEEECCc----cHHHHHHHHHH
Confidence 6899999999999899999999999999987542 23455555543
No 25
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.30 E-value=1.9e-12 Score=138.32 Aligned_cols=73 Identities=27% Similarity=0.382 Sum_probs=62.3
Q ss_pred CCChHHHHHHHHHHH----HccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEEEE
Q 005740 572 LLSGGQKQRIAIARA----ILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIVVI 647 (680)
Q Consensus 572 ~LSGGQrQRIaIARA----ll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~vl 647 (680)
.||||||.++++|=. .+.++|+++||||+++||+.+...+.+.|+++.. .+.-+|+|||+..++..||+++.+
T Consensus 332 ~lSgGEk~~~~lal~lal~~~~~~pililDE~d~~Ld~~~~~~~~~~l~~~~~---~~~Q~I~iTH~~~~~~~ad~~~~V 408 (427)
T d1w1wa_ 332 YLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRN---PDLQFIVISLKNTMFEKSDALVGV 408 (427)
T ss_dssp GSCHHHHHHHHHHHHHHHHTSSCCSEEEESSTTTTCCHHHHHHHHHHHHHHCB---TTBEEEEECSCHHHHTTCSEEEEE
T ss_pred hhccchHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC---CCCEEEEEeCCHHHHHhcccEEEE
Confidence 679999999887643 3578899999999999999999999999988732 345699999999999999998855
No 26
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.18 E-value=2.2e-11 Score=125.04 Aligned_cols=76 Identities=26% Similarity=0.463 Sum_probs=68.0
Q ss_pred CCChHHHHHHHHHHHHc------cCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEE
Q 005740 572 LLSGGQKQRIAIARAIL------RDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIV 645 (680)
Q Consensus 572 ~LSGGQrQRIaIARAll------~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~ 645 (680)
.|||||||+++||-.+. ++|+||++|||+++||+...+.+.+.|+++.+. ++++|++||+...+..||+|+
T Consensus 278 ~lS~Ge~~~~~la~~l~~~~~~~~~~~illiDEpe~~Lh~~~~~~l~~~l~~~~~~---~~QviitTHs~~~~~~~d~~~ 354 (369)
T g1ii8.1 278 FLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKK---IPQVILVSHDEELKDAADHVI 354 (369)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHSSCSEEEEECCSSSSCSHHHHHHHHHHHHTGGG---SSEEEEEESCGGGGGTSSEEE
T ss_pred ccchHHHHHHHHHHHHHHHHhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhc---CCEEEEEechHHHHHhCCEEE
Confidence 69999999998876554 789999999999999999999999999998643 469999999999999999999
Q ss_pred EE--eCC
Q 005740 646 VI--DDG 650 (680)
Q Consensus 646 vl--~~G 650 (680)
++ ++|
T Consensus 355 ~v~~~~g 361 (369)
T g1ii8.1 355 RISLENG 361 (369)
T ss_dssp EEEECSS
T ss_pred EEEEeCC
Confidence 99 566
No 27
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.15 E-value=1.1e-10 Score=119.62 Aligned_cols=75 Identities=29% Similarity=0.414 Sum_probs=65.0
Q ss_pred CCChHHHHHHHHHHH----HccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEEE-
Q 005740 572 LLSGGQKQRIAIARA----ILRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIVV- 646 (680)
Q Consensus 572 ~LSGGQrQRIaIARA----ll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~v- 646 (680)
.+|+|||+.+.++.. ...+++++++|||-++||+...+.+.+.|++.. ++.=+|++||+...+..+|+++.
T Consensus 219 ~~~~g~~~l~~~~~~~~~~~~~~~~~~~iDEpe~~Lhp~~~~~l~~~l~~~~----~~~QviitTHsp~~~~~~d~~~~v 294 (308)
T d1e69a_ 219 LLSGGEKALVGLALLFALMEIKPSPFYVLDEVDSPLDDYNAERFKRLLKENS----KHTQFIVITHNKIVMEAADLLHGV 294 (308)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTSCCSEEEEESCCSSCCHHHHHHHHHHHHHHT----TTSEEEEECCCTTGGGGCSEEEEE
T ss_pred hhhHHHhhHHHHHhhhhhhhhccCchhhhhhccccCCHHHHHHHHHHHHHhc----cCCEEEEEECCHHHHHhcccEEEE
Confidence 689999999877765 445678999999999999999999999998874 45789999999999999999965
Q ss_pred -EeCC
Q 005740 647 -IDDG 650 (680)
Q Consensus 647 -l~~G 650 (680)
+++|
T Consensus 295 ~~~~g 299 (308)
T d1e69a_ 295 TMVNG 299 (308)
T ss_dssp EESSS
T ss_pred EEeCC
Confidence 6677
No 28
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=98.92 E-value=7.9e-09 Score=106.29 Aligned_cols=72 Identities=25% Similarity=0.373 Sum_probs=62.6
Q ss_pred CCChHHHHHHHHHHHHc----cCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEEEE
Q 005740 572 LLSGGQKQRIAIARAIL----RDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIVVI 647 (680)
Q Consensus 572 ~LSGGQrQRIaIARAll----~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~vl 647 (680)
.||+||++...++-++- ++|.++++|||-++|++...+.+.+.+++.. ++.=+|++||+..++..+|+++.+
T Consensus 224 ~ls~~~~~l~~l~~~~~~~~~~~~~~~~ide~e~~L~~~~~~~l~~~l~~~~----~~~Q~iitTh~~~~~~~~~~l~~i 299 (329)
T g1xew.1 224 AMSGGEKALTALAFVFAIQKFKPAPFYLFDEIDAHLDDANVKRVADLIKESS----KESQFIVITLRDVMMANADKIIGV 299 (329)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHSCCSEEEEESTTTTSCHHHHHHHHHHHHHHT----TTSEEEEECCCHHHHHHCSEEEEE
T ss_pred hhhhHHHHHHHHHHHHHHHhhcccchhhhhhHHhhcCHHHHHHHHHHHHHhc----cCCeEEEEeCCHHHHHhhHhhcCE
Confidence 68999999887766553 7899999999999999999999999998874 345589999999999999999987
No 29
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.66 E-value=3.2e-07 Score=84.71 Aligned_cols=136 Identities=15% Similarity=-0.027 Sum_probs=74.1
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEEEEccCCcCccccHHHHHhcCCC-----CC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIGFVGQEPQLLQMDIKSNIMYGCP-----KD 538 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~~LF~gTI~eNI~~g~~-----~~ 538 (680)
+.|.|+||+|+|||||++.+.+.+....+.+.+.+.+........+...++-+.|+...+.....++...... ..
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSRVGLEPPPGKRECRVGQYV 81 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHHHTTCCCEEEECCEEETTSSEEEEEEEETTSCEEEEEECCCCCCSSSCCEESSSSE
T ss_pred cEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEeccccccccccccccccccchhhhhhhhhhhhhhhhhcccccccc
Confidence 3589999999999999999999998887777666555433333333333444445444333222222221110 01
Q ss_pred CCHHHHHHHHHHhcHHHHHHcC-CCCcccccCC--CCCChHHHHHHHHHHHHccCCCeEEEeCCCC
Q 005740 539 VKNEDIEWAAKQAYVHEFILSL-PCGYETLVDD--DLLSGGQKQRIAIARAILRDPAILLLDEATS 601 (680)
Q Consensus 539 ~s~eei~~A~~~a~l~dfI~~L-P~G~dT~vge--~~LSGGQrQRIaIARAll~~p~ILILDEaTS 601 (680)
...++....... ..+.+..+ ..+.+..+.+ ...+......+.+-|.++.+++++++...+.
T Consensus 82 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (189)
T d2i3ba1 82 VDLTSFEQLALP--VLRNADCSSGPGQRVCVIDEIGKMELFSQLFIQAVRQTLSTPGTIILGTIPV 145 (189)
T ss_dssp ECHHHHHTTTTT--TTCCCCCCCSSCCCCEEECCCSTTTTTCSHHHHHHHHHHHCSSCCEEEECCC
T ss_pred ccHHHHHHHHHH--HHHHHHHHhhcCCCeeEeeccccchhhhHHHHHHHHHHhccCceEEEecccc
Confidence 122222222111 11112111 2345555543 3556667777888888888887766654433
No 30
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.44 E-value=1.2e-05 Score=74.92 Aligned_cols=66 Identities=26% Similarity=0.263 Sum_probs=42.6
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCCCCCCceE----------EECCeeCCCCCHHHhhccEEEEccCCcCccccHHHHH
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQI----------YIDGFPLTDLDIRWLREKIGFVGQEPQLLQMDIKSNI 531 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I----------~idG~di~~~~~~~LR~~I~~V~Qd~~LF~gTI~eNI 531 (680)
|+.+.|+||||||||||++.|..-++.-...+ ..||+|..-++.+...+.+. ++-++-.+....|.
T Consensus 2 G~iivl~GpsG~GK~tl~~~L~~~~~~~~~~~~~tTR~~r~~e~~G~dy~fvs~~~f~~~~~---~~~f~e~~~~~~~~ 77 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLID---QGELLEWAEIHGGL 77 (182)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHSTTCEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHH---TTCEEEEEEEGGGT
T ss_pred CeEEEEECCCCCCHHHHHHHHHhhCCCCeEEEEeeccCCCccccCCcceeeccchhhhhhhc---ccccchhhhcccCc
Confidence 89999999999999999999987664322222 23576666666666655432 44444444444443
No 31
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.36 E-value=2.1e-05 Score=71.79 Aligned_cols=26 Identities=35% Similarity=0.520 Sum_probs=24.1
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
.|+.++|+|++||||||+++.|.+-+
T Consensus 3 ~g~iI~l~G~~GsGKSTia~~La~~l 28 (176)
T d1zp6a1 3 GGNILLLSGHPGSGKSTIAEALANLP 28 (176)
T ss_dssp TTEEEEEEECTTSCHHHHHHHHHTCS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 58999999999999999999998865
No 32
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=97.31 E-value=6.8e-05 Score=67.79 Aligned_cols=32 Identities=34% Similarity=0.534 Sum_probs=26.1
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDG 498 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG 498 (680)
+.+.|+|++||||||+++.|++-+. +...++|
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~---~~~~~~~ 34 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLD---NSAYIEG 34 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSS---SEEEEEH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcC---CCEEEeh
Confidence 4689999999999999999998774 4455554
No 33
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=97.19 E-value=0.00061 Score=67.06 Aligned_cols=35 Identities=34% Similarity=0.366 Sum_probs=27.9
Q ss_pred CcccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhc
Q 005740 451 PILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 451 ~VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r 485 (680)
+-|+++.-=+.||+.+.|.|+||+||||++.-++.
T Consensus 23 ~~lD~~~~G~~~G~l~vi~G~~G~GKT~~~~~la~ 57 (277)
T d1cr2a_ 23 TGINDKTLGARGGEVIMVTSGSGMGKSTFVRQQAL 57 (277)
T ss_dssp TTHHHHHCSBCTTCEEEEECSTTSSHHHHHHHHHH
T ss_pred hhHHHHhcCCCCCeEEEEEeCCCCCHHHHHHHHHH
Confidence 34666554489999999999999999999766653
No 34
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.18 E-value=7.2e-05 Score=68.07 Aligned_cols=27 Identities=19% Similarity=0.222 Sum_probs=24.4
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
++|-+|.|+|+|||||||+.+.|.+-+
T Consensus 4 ~~g~~I~l~G~~GsGKTTia~~La~~L 30 (183)
T d1m8pa3 4 TQGFTIFLTGYMNSGKDAIARALQVTL 30 (183)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 468999999999999999999998755
No 35
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=97.18 E-value=4.8e-05 Score=68.94 Aligned_cols=27 Identities=26% Similarity=0.438 Sum_probs=23.0
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSD 491 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~ 491 (680)
.++|+|++|||||||++-|.+.+....
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~~~g 30 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALCARG 30 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTT
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCC
Confidence 689999999999999999987665443
No 36
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.07 E-value=0.00014 Score=69.98 Aligned_cols=33 Identities=24% Similarity=0.408 Sum_probs=25.8
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceE
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQI 494 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I 494 (680)
+|++++++|+||.|||||+|.|.+-..-.-|+|
T Consensus 94 ~~kt~~~~G~SGVGKSTLiN~L~~~~~~~T~~v 126 (225)
T d1u0la2 94 KGKISTMAGLSGVGKSSLLNAINPGLKLRVSEV 126 (225)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHSTTCCCC----
T ss_pred cCCeEEEECCCCCCHHHHHHhhcchhhhhccCc
Confidence 599999999999999999999987665544544
No 37
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=97.06 E-value=0.00078 Score=66.00 Aligned_cols=45 Identities=20% Similarity=0.278 Sum_probs=30.3
Q ss_pred HccCCCeEEEeCCCCCC-----CHHHHHHHHHHHHHHhccCCCCeEEEEEec
Q 005740 587 ILRDPAILLLDEATSAL-----DSESEHYVKGVLHALRNDCKTKRTVIVIAH 633 (680)
Q Consensus 587 ll~~p~ILILDEaTSaL-----D~~tE~~I~~~l~~l~~~~~~~~TvIvIaH 633 (680)
-..+++++|+|--++.. |.+....+.+.|.++.+. .++|+|+|.|
T Consensus 129 ~~~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~--~~~~vi~v~H 178 (274)
T d1nlfa_ 129 AAEGRRLMVLDTLRRFHIEEENASGPMAQVIGRMEAIAAD--TGCSIVFLHH 178 (274)
T ss_dssp HHTTCSEEEEECGGGGCCSCTTCHHHHHHHHHHHHHHHHH--HCCEEEEEEE
T ss_pred hccCccEEecCchhhhccccccchhhHHHHHHHHHHHhhc--CCCceehhhh
Confidence 35789999999654322 334445566667666543 4789999999
No 38
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=97.02 E-value=0.00025 Score=72.22 Aligned_cols=56 Identities=18% Similarity=0.288 Sum_probs=41.7
Q ss_pred eeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEEEEc
Q 005740 460 IEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIGFVG 517 (680)
Q Consensus 460 I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~~V~ 517 (680)
++.|..+.|+|++||||||+++.|+++.+|..=-|.| .|-.++.+..-++.+.+..
T Consensus 163 v~~~~nili~G~tgSGKTT~l~al~~~i~~~~rivti--Ed~~El~l~~~~~~~~~~~ 218 (323)
T d1g6oa_ 163 IAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISI--EDTEEIVFKHHKNYTQLFF 218 (323)
T ss_dssp HHHTCCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEE--ESSCCCCCSSCSSEEEEEC
T ss_pred HHhCCCEEEEeeccccchHHHHHHhhhcccccceeec--cchhhhhcccccccceecc
Confidence 4556779999999999999999999999988777777 3455665544334444433
No 39
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.97 E-value=0.00033 Score=64.57 Aligned_cols=87 Identities=23% Similarity=0.243 Sum_probs=54.1
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEEEEccCCcCccccHHHHHhcCCCCCCC
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIGFVGQEPQLLQMDIKSNIMYGCPKDVK 540 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~~LF~gTI~eNI~~g~~~~~s 540 (680)
++-+.+-++|++||||||+++-++.- .|.+.++. +.++ +
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~~----~~~~~i~~--------D~~~-----------------------------~ 50 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLVS----AGYVHVNR--------DTLG-----------------------------S 50 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTGG----GTCEEEEH--------HHHC-----------------------------S
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHh----cCCEEEch--------HHHH-----------------------------H
Confidence 55688999999999999999887532 23333322 1111 1
Q ss_pred HHHHHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHH-HHHHHHHccCCCeEEE
Q 005740 541 NEDIEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQR-IAIARAILRDPAILLL 596 (680)
Q Consensus 541 ~eei~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQR-IaIARAll~~p~ILIL 596 (680)
.+.+.+.++ ..|..|.+.++...+++-.||++ +.+||..=-+..++.|
T Consensus 51 ~~~~~~~~~--------~~l~~g~~vIiD~t~~~~~~R~~~~~~a~~~~~~~~~v~l 99 (172)
T d1yj5a2 51 WQRCVSSCQ--------AALRQGKRVVIDNTNPDVPSRARYIQCAKDAGVPCRCFNF 99 (172)
T ss_dssp HHHHHHHHH--------HHHHTTCCEEEESCCCSHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHH--------HHHHCCCCceeeCcCCCHHHHHHHHHHHHhcCCCEEEEEe
Confidence 122223222 23456888787778999999887 6788875333344444
No 40
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=96.94 E-value=0.00014 Score=66.27 Aligned_cols=24 Identities=46% Similarity=0.639 Sum_probs=22.4
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
++|+|+|++|||||||++.|..-|
T Consensus 8 K~I~i~G~~GsGKTTla~~La~~~ 31 (192)
T d1lw7a2 8 KTVAILGGESSGKSVLVNKLAAVF 31 (192)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHh
Confidence 579999999999999999999877
No 41
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.89 E-value=0.00014 Score=69.19 Aligned_cols=67 Identities=24% Similarity=0.409 Sum_probs=49.6
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCC--------------CCCceEEECCeeCCCCCHHHhhccEEEEccCCcCccccH
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYE--------------PSDGQIYIDGFPLTDLDIRWLREKIGFVGQEPQLLQMDI 527 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~--------------p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~~LF~gTI 527 (680)
.|..+.|+||||||||||.+.|..-++ |-.|+ .||+|..=++.+...+.+. ++-++..+++
T Consensus 1 ~G~livi~GPSG~GK~tl~~~L~~~~p~~~~~~~is~TTR~~R~~E--~~G~dY~Fvs~~~F~~~i~---~g~flE~~~~ 75 (205)
T d1s96a_ 1 QGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGE--VHGEHYFFVNHDEFKEMIS---RDAFLEHAEV 75 (205)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHSCTTTEEECCCEECSCCCTTC--CBTTTBEECCHHHHHHHHH---TTCEEEEEEE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHhhCCccCceEEEEEeccCCCccc--cccccceeecHHHHHHHhh---hhhheeEEEE
Confidence 488999999999999999988875542 33455 4888888888888887654 5556666666
Q ss_pred HHHHhcC
Q 005740 528 KSNIMYG 534 (680)
Q Consensus 528 ~eNI~~g 534 (680)
..| .||
T Consensus 76 ~g~-~YG 81 (205)
T d1s96a_ 76 FGN-YYG 81 (205)
T ss_dssp TTE-EEE
T ss_pred CCc-eec
Confidence 555 455
No 42
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=96.89 E-value=0.00019 Score=65.03 Aligned_cols=28 Identities=18% Similarity=0.399 Sum_probs=25.0
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
|+|-.++|.|++||||||+++.|..-|.
T Consensus 3 pk~~~I~i~G~~GsGKTT~~~~La~~l~ 30 (174)
T d1y63a_ 3 PKGINILITGTPGTGKTSMAEMIAAELD 30 (174)
T ss_dssp CSSCEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHhC
Confidence 5788999999999999999999987663
No 43
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.86 E-value=0.0011 Score=63.57 Aligned_cols=32 Identities=19% Similarity=0.441 Sum_probs=25.6
Q ss_pred ccceeEE--eeCCcEEEEeCCCCCcHHHHHHHHhc
Q 005740 453 LNHVCLT--IEANEVVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 453 L~~isl~--I~~Ge~vAIVG~SGsGKSTL~~LL~r 485 (680)
|+++ +. +++|+.+.|.|++||||||++.-++.
T Consensus 15 LD~~-l~GGi~~gsl~li~G~pGsGKT~l~~qia~ 48 (242)
T d1tf7a2 15 LDEM-CGGGFFKDSIILATGATGTGKTLLVSRFVE 48 (242)
T ss_dssp HHHH-TTSSEESSCEEEEEECTTSSHHHHHHHHHH
T ss_pred HHHh-hcCCCcCCeEEEEEeCCCCCHHHHHHHHHH
Confidence 5544 33 89999999999999999999855543
No 44
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.83 E-value=0.00015 Score=67.13 Aligned_cols=26 Identities=35% Similarity=0.399 Sum_probs=23.6
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+|-+|.|+|+|||||||+++.|++.+
T Consensus 18 ~g~vI~L~G~pGSGKTTiAk~La~~l 43 (195)
T d1x6va3 18 RGCTVWLTGLSGAGKTTVSMALEEYL 43 (195)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 57899999999999999999998755
No 45
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.82 E-value=0.00018 Score=65.67 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=25.6
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCCCCCCce
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQ 493 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~ 493 (680)
++.|+|.|++||||||+++.|...+......
T Consensus 1 ~kiI~i~G~~GsGKsT~~~~L~~~l~~~~~~ 31 (190)
T d1khta_ 1 NKVVVVTGVPGVGSTTSSQLAMDNLRKEGVN 31 (190)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHHTTTCC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999998877554443
No 46
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.81 E-value=0.00023 Score=64.36 Aligned_cols=27 Identities=26% Similarity=0.471 Sum_probs=23.9
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+.+..+.|+|++||||||+++.|..-+
T Consensus 4 ~~~~iivl~G~~GsGKsT~a~~La~~l 30 (171)
T d1knqa_ 4 HDHHIYVLMGVSGSGKSAVASEVAHQL 30 (171)
T ss_dssp TTSEEEEEECSTTSCHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 467889999999999999999998754
No 47
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=96.81 E-value=0.00028 Score=63.85 Aligned_cols=26 Identities=27% Similarity=0.372 Sum_probs=23.7
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
.+.|.|.|+|||||||+++.|.+.+.
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~ 28 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLP 28 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcC
Confidence 56899999999999999999999874
No 48
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.81 E-value=0.00014 Score=67.85 Aligned_cols=60 Identities=25% Similarity=0.423 Sum_probs=41.6
Q ss_pred EEEeCCCCCcHHHHHHHHhcCC-------------CCCCceEEECCeeCCCCCHHHhhccEEEEccCCcCccccHHHH
Q 005740 466 VAIVGLSGSGKSTFVNLLLRLY-------------EPSDGQIYIDGFPLTDLDIRWLREKIGFVGQEPQLLQMDIKSN 530 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r~y-------------~p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~~LF~gTI~eN 530 (680)
|.|+|||||||+||++.|+.-+ +|..|++ ||+|..-++.+...+.+. +.-++..+.+..|
T Consensus 4 Ivl~GpsG~GK~tl~~~L~~~~~~~~~~~~~~TTR~~r~~E~--~g~dy~fvs~~~f~~~~~---~g~f~e~~~~~g~ 76 (186)
T d1gkya_ 4 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEV--NGKDYNFVSVDEFKSMIK---NNEFIEWAQFSGN 76 (186)
T ss_dssp EEEECCTTSSHHHHHHHHHHHCTTTEEECCEEECSCCCTTCC--BTTTEEECCHHHHHHHHH---TTCEEEEEEETTE
T ss_pred EEEECCCCCCHHHHHHHHHHhCCcceeEEEeeccCCCCCCCc--CCccceeccHHHHHHHHh---cccceeeeEEccc
Confidence 8899999999999999886433 2355654 788887788887766544 4444444444333
No 49
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=96.80 E-value=0.00025 Score=63.07 Aligned_cols=24 Identities=33% Similarity=0.409 Sum_probs=21.3
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+.+.|+||+||||||+.++|+.-+
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L 26 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQL 26 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHh
Confidence 358899999999999999998765
No 50
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.75 E-value=0.00027 Score=65.33 Aligned_cols=24 Identities=46% Similarity=0.576 Sum_probs=21.6
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
.|||.|+||||||||++.|...+.
T Consensus 24 iIgI~G~~GSGKSTla~~L~~~l~ 47 (198)
T d1rz3a_ 24 VLGIDGLSRSGKTTLANQLSQTLR 47 (198)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhc
Confidence 599999999999999999987654
No 51
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.73 E-value=0.00031 Score=62.38 Aligned_cols=32 Identities=28% Similarity=0.478 Sum_probs=23.3
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDG 498 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG 498 (680)
+.+.|+|++||||||+++.|.+-. .|...++.
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~---~~~~~~~~ 34 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKN---PGFYNINR 34 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHS---TTEEEECH
T ss_pred EEEEEECCCCCCHHHHHHHHHHhC---CCCEEech
Confidence 468899999999999999775422 24555443
No 52
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=96.70 E-value=0.0003 Score=63.44 Aligned_cols=23 Identities=26% Similarity=0.333 Sum_probs=20.5
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
++.|+|++||||||+++.|+.-|
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l 28 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKS 28 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 47899999999999999997665
No 53
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.67 E-value=0.0004 Score=69.28 Aligned_cols=32 Identities=25% Similarity=0.506 Sum_probs=27.6
Q ss_pred cccceeEEeeCCcEEEEeCCCCCcHHHHHHHHh
Q 005740 452 ILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 452 VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~ 484 (680)
-++|+++++.+| .+.|||++||||||++..|.
T Consensus 13 ~~~~~~i~~~~~-~~vi~G~NgsGKTtileAI~ 44 (369)
T g1ii8.1 13 SHSDTVVEFKEG-INLIIGQNGSGKSSLLDAIL 44 (369)
T ss_dssp SCSSEEEECCSE-EEEEECCTTSSHHHHHHHHH
T ss_pred cCcCeEEEcCCC-eEEEECCCCCCHHHHHHHHH
Confidence 367888888887 67799999999999999883
No 54
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.65 E-value=0.0018 Score=63.81 Aligned_cols=30 Identities=17% Similarity=0.289 Sum_probs=25.7
Q ss_pred EeeCCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 459 TIEANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 459 ~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
.+++...+-+.||+|+|||++++.+++.+.
T Consensus 37 g~~~~~giLL~Gp~GtGKT~l~~ala~~~~ 66 (265)
T d1r7ra3 37 GMTPSKGVLFYGPPGCGKTLLAKAIANECQ 66 (265)
T ss_dssp CCCCCCEEEEBCCTTSSHHHHHHHHHHHTT
T ss_pred CCCCCCeEEEECCCCCcchhHHHHHHHHhC
Confidence 355666799999999999999999999883
No 55
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.63 E-value=0.00027 Score=64.21 Aligned_cols=37 Identities=24% Similarity=0.335 Sum_probs=26.6
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCCCCCC---ceEEECCee
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLYEPSD---GQIYIDGFP 500 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y~p~~---G~I~idG~d 500 (680)
+.++|+|++|||||||++-|.+.+.... |.|.-|+.+
T Consensus 2 kii~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik~d~~~ 41 (165)
T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHG 41 (165)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC--
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEEeccCc
Confidence 4689999999999999998887776543 444445443
No 56
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=96.63 E-value=0.00019 Score=69.44 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=22.9
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEE
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIY 495 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~ 495 (680)
+|++++++|+||.|||||+|.|.+-..-.-|+|.
T Consensus 96 ~~~~~vl~G~SGVGKSSLiN~L~~~~~~~t~~vs 129 (231)
T d1t9ha2 96 QDKTTVFAGQSGVGKSSLLNAISPELGLRTNEIS 129 (231)
T ss_dssp TTSEEEEEESHHHHHHHHHHHHCC----------
T ss_pred ccceEEEECCCCccHHHHHHhhccHhHhhhcccc
Confidence 5899999999999999999999987766666665
No 57
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=96.59 E-value=0.0005 Score=63.78 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=27.8
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEEC
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYID 497 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~id 497 (680)
|+|=++.|+||+||||||++++|+.-| |-..++
T Consensus 1 p~~~riil~G~pGSGKsT~a~~La~~~----g~~~i~ 33 (190)
T d1ak2a1 1 PKGVRAVLLGPPGAGKGTQAPKLAKNF----CVCHLA 33 (190)
T ss_dssp CCCCEEEEECCTTSSHHHHHHHHHHHH----TCEEEE
T ss_pred CCccEEEEECCCCCCHHHHHHHHHHHh----CCeEEe
Confidence 678899999999999999999999766 444544
No 58
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=96.59 E-value=0.002 Score=63.17 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=23.8
Q ss_pred eeCCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 460 IEANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 460 I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
+++...+-+.||+|||||++++.|++.+.
T Consensus 42 ~~~~~~iLL~GppGtGKT~la~~iA~~~~ 70 (256)
T d1lv7a_ 42 GKIPKGVLMVGPPGTGKTLLAKAIAGEAK 70 (256)
T ss_dssp -CCCCEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred CCCCCeEEeeCCCCCCccHHHHHHHHHcC
Confidence 33446688999999999999999998763
No 59
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=96.51 E-value=0.00077 Score=61.96 Aligned_cols=41 Identities=41% Similarity=0.608 Sum_probs=29.6
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC------------CCCCceEEECCeeCCCCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY------------EPSDGQIYIDGFPLTDLD 505 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y------------~p~~G~I~idG~di~~~~ 505 (680)
+|||+|++|+|||||++-|++-- .+..|.+.++|.++..++
T Consensus 10 kV~iiG~~~~GKSTLin~l~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~d 62 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVD 62 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHTSTTEEECCCC------CCEEEEETTEEEEESS
T ss_pred EEEEECCCCCCHHHHHHHHHCCCcceeecccccccccceeeeccCCceeeeec
Confidence 69999999999999999998643 234556777776554433
No 60
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.49 E-value=0.00053 Score=63.81 Aligned_cols=31 Identities=32% Similarity=0.497 Sum_probs=26.2
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEEC
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYID 497 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~id 497 (680)
...|+|+||+||||||+++.|+.-| |-+.++
T Consensus 6 p~iI~i~G~pGSGKsT~a~~La~~~----g~~~i~ 36 (194)
T d1qf9a_ 6 PNVVFVLGGPGSGKGTQCANIVRDF----GWVHLS 36 (194)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHH----CCEEEE
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHH----CCceEc
Confidence 4689999999999999999999877 555554
No 61
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.43 E-value=0.00062 Score=63.06 Aligned_cols=76 Identities=20% Similarity=0.256 Sum_probs=44.7
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCCC-------------CCCceEEECCeeCCCCCHHHhhccEEEEccCCcCccccHHH
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLYE-------------PSDGQIYIDGFPLTDLDIRWLREKIGFVGQEPQLLQMDIKS 529 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y~-------------p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~~LF~gTI~e 529 (680)
.+.+.|+||||+|||||++.|++-++ |-.|+ .||+|..=++.++.++.+. ++-++-...+..
T Consensus 3 ~k~ivl~Gpsg~GK~tl~~~L~~~~~~~~~~~v~~TTR~~R~~E--~~G~dY~Fvs~~~F~~~~~---~g~fie~~~~~g 77 (178)
T d1kgda_ 3 RKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDE--ENGKNYYFVSHDQMMQDIS---NNEYLEYGSHED 77 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHCTTTEECCCCEECSCC---C--CBTTTBEECCHHHHHHHHH---TTCEEEEEEETT
T ss_pred CCcEEEECCCCCCHHHHHHHHHHhCCcCeeeccccccCCCCCcc--ccCccceeeehhhhhhhee---cCceEEEeeecc
Confidence 35799999999999999998875432 23454 4677655567777665442 344444444433
Q ss_pred HHhcCCCCCCCHHHHHHHH
Q 005740 530 NIMYGCPKDVKNEDIEWAA 548 (680)
Q Consensus 530 NI~~g~~~~~s~eei~~A~ 548 (680)
| .||- +.+++.+++
T Consensus 78 ~-~YGt----~~~~i~~~~ 91 (178)
T d1kgda_ 78 A-MYGT----KLETIRKIH 91 (178)
T ss_dssp E-EEEE----EHHHHHHHH
T ss_pred c-ceee----eeecccchh
Confidence 3 3551 344455443
No 62
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.42 E-value=0.00063 Score=63.40 Aligned_cols=115 Identities=23% Similarity=0.224 Sum_probs=61.3
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEEEEccCCcCccccHHHHHhcCCCCCCCHH
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIGFVGQEPQLLQMDIKSNIMYGCPKDVKNE 542 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~~LF~gTI~eNI~~g~~~~~s~e 542 (680)
-..+.|+||+||||||++++|+.-| |-++|+.- +-+|+.+ .+...-....+++-..-+ .-..++
T Consensus 8 ~~iI~i~GppGSGKsT~a~~La~~~----g~~~is~g-------dl~R~~~---~~~~~~~~~~i~~~~~~~--~~~~~~ 71 (196)
T d1ukza_ 8 VSVIFVLGGPGAGKGTQCEKLVKDY----SFVHLSAG-------DLLRAEQ---GRAGSQYGELIKNCIKEG--QIVPQE 71 (196)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHS----SCEEEEHH-------HHHHHHH---HSTTCSCHHHHHHHHHTT--CCCCHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHh----CCeEEehh-------HHHHHHh---hhcccHHHHHHHHhhhcc--ccccch
Confidence 4569999999999999999999988 66666531 2334322 122222333344333333 123455
Q ss_pred HHHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHHHHHccCCCeEEEeC
Q 005740 543 DIEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIARAILRDPAILLLDE 598 (680)
Q Consensus 543 ei~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIARAll~~p~ILILDE 598 (680)
.+......+-...+.. .-+..+-+ ..-....|...+.+.+....-++.||=
T Consensus 72 ~~~~~~~~~~~~~~~~----~~~~~vl~-g~p~~~~q~~~~~~~~~~~~~~i~l~~ 122 (196)
T d1ukza_ 72 ITLALLRNAISDNVKA----NKHKFLID-GFPRKMDQAISFERDIVESKFILFFDC 122 (196)
T ss_dssp HHHHHHHHHHHHHHHT----TCCEEEEE-TCCCSHHHHHHHHHHTCCCSEEEEEEC
T ss_pred hHHHHHHHHHHhhhcc----CCCceeee-ccchhHHHHHHHHHhccccceeeccCC
Confidence 4444443332222211 11222211 122346788888887666555666653
No 63
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.40 E-value=0.0024 Score=61.40 Aligned_cols=42 Identities=14% Similarity=0.326 Sum_probs=30.3
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEecCcc
Q 005740 590 DPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAHRLS 636 (680)
Q Consensus 590 ~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRls 636 (680)
+.+++|+||+-. |..+....+.+.++.. ..+...|++|++++
T Consensus 131 ~~~iiiide~d~-l~~~~~~~l~~~~e~~----~~~~~~Il~tn~~~ 172 (252)
T d1sxje2 131 RYKCVIINEANS-LTKDAQAALRRTMEKY----SKNIRLIMVCDSMS 172 (252)
T ss_dssp CCEEEEEECTTS-SCHHHHHHHHHHHHHS----TTTEEEEEEESCSC
T ss_pred CceEEEeccccc-cccccchhhhcccccc----cccccceeeecccc
Confidence 456999999965 6777777776666654 33456788999875
No 64
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=96.36 E-value=0.00011 Score=67.71 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=28.1
Q ss_pred ccceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcC
Q 005740 453 LNHVCLTIEANEVVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 453 L~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
.++.++++.+| .+.|+|++||||||++..|.-.
T Consensus 15 ~~~~~i~f~~~-~tvi~G~NGsGKStil~Ai~~~ 47 (222)
T d1qhla_ 15 FFARTFDLDEL-VTTLSGGNGAGKSTTMAAFVTA 47 (222)
T ss_dssp EEEEEECHHHH-HHHHHSCCSHHHHHHHHHHHHH
T ss_pred EeeEEEEcCCC-eEEEECCCCCCHHHHHHHHHHH
Confidence 57778888776 9999999999999999999643
No 65
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.35 E-value=0.00075 Score=63.77 Aligned_cols=45 Identities=16% Similarity=0.377 Sum_probs=31.0
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEEEEccCCcCc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIGFVGQEPQLL 523 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~~LF 523 (680)
.|||.|+|||||||+.+.|...+.-. ....-...+.+++||.+..
T Consensus 4 iIgI~G~~gSGKSTla~~L~~~l~~~--------------~~~~~~~~~~vi~~D~yy~ 48 (213)
T d1uj2a_ 4 LIGVSGGTASGKSSVCAKIVQLLGQN--------------EVDYRQKQVVILSQDSFYR 48 (213)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTGG--------------GSCGGGCSEEEEEGGGGBC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhchh--------------ccccCCCceEEEecccccc
Confidence 58999999999999999887654211 0011234577888887743
No 66
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=96.25 E-value=0.00079 Score=62.61 Aligned_cols=22 Identities=41% Similarity=0.647 Sum_probs=20.6
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
+|||||++|+|||||++.|.|.
T Consensus 25 ~I~lvG~~n~GKSTLin~L~g~ 46 (195)
T d1svia_ 25 EIALAGRSNVGKSSFINSLINR 46 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHhcCC
Confidence 5999999999999999999974
No 67
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.21 E-value=0.00033 Score=66.74 Aligned_cols=43 Identities=26% Similarity=0.196 Sum_probs=32.4
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCCCC--CCceEEECCeeCCC
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLYEP--SDGQIYIDGFPLTD 503 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p--~~G~I~idG~di~~ 503 (680)
++|.++-|.|.||||||||++.|..-+.- .--.+.+||-++++
T Consensus 22 ~kg~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~iR~ 66 (208)
T d1m7ga_ 22 QRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRF 66 (208)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHTT
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchHHHH
Confidence 57889999999999999999988753321 22457888866543
No 68
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=96.21 E-value=0.0046 Score=60.07 Aligned_cols=23 Identities=26% Similarity=0.323 Sum_probs=20.6
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
-+-+.||+|||||++++.|.+.+
T Consensus 44 giLl~GppGtGKT~la~aia~~~ 66 (247)
T d1ixza_ 44 GVLLVGPPGVGKTHLARAVAGEA 66 (247)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHT
T ss_pred eEEEecCCCCChhHHHHHHHHHc
Confidence 37899999999999999999754
No 69
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=96.16 E-value=0.001 Score=60.55 Aligned_cols=24 Identities=33% Similarity=0.421 Sum_probs=21.0
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+.+.|+|++||||||+.++|+.-+
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~L 26 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARAL 26 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHh
Confidence 467899999999999999997655
No 70
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=96.12 E-value=0.0011 Score=59.92 Aligned_cols=29 Identities=31% Similarity=0.604 Sum_probs=23.7
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCceEEEC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYID 497 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~id 497 (680)
.+.|+|++||||||+.++|+..+ |--++|
T Consensus 2 ~I~liG~~GsGKsTi~k~La~~l----~~~~~d 30 (161)
T d1viaa_ 2 NIVFIGFMGSGKSTLARALAKDL----DLVFLD 30 (161)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHH----TCEEEE
T ss_pred cEEEECCCCCCHHHHHHHHHHHh----CCCEEe
Confidence 48899999999999999997766 444554
No 71
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.12 E-value=0.0011 Score=61.70 Aligned_cols=45 Identities=29% Similarity=0.424 Sum_probs=32.0
Q ss_pred EEEeCCCCCcHHHHHHHHhcCC-------------CCCCceEEECCeeCCCCCHHHhhcc
Q 005740 466 VAIVGLSGSGKSTFVNLLLRLY-------------EPSDGQIYIDGFPLTDLDIRWLREK 512 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r~y-------------~p~~G~I~idG~di~~~~~~~LR~~ 512 (680)
|.|+||||||||||++.|+.-+ +|..|+. ||.|..-++.+...+.
T Consensus 3 Ivl~GPsGsGK~tl~~~L~~~~~~~~~~~~~~TTR~~r~~E~--~g~dy~fvs~~~f~~~ 60 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEE--DGKDYYFVTREMMQRD 60 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTTTEEECCCEECSCCCTTCC--BTTTBEECCHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHhCCCceeEEEEEeccCCCCCCc--cCceeEEeehhHHHHH
Confidence 7899999999999999886543 2334543 6766666666666443
No 72
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.07 E-value=0.0011 Score=60.58 Aligned_cols=22 Identities=32% Similarity=0.380 Sum_probs=20.4
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
+|+|||++|+|||||++.|.|-
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 6899999999999999999873
No 73
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.04 E-value=0.00075 Score=62.87 Aligned_cols=117 Identities=19% Similarity=0.199 Sum_probs=67.2
Q ss_pred eeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEEEEccCCcCccccHHHHHhcCCCCCC
Q 005740 460 IEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIGFVGQEPQLLQMDIKSNIMYGCPKDV 539 (680)
Q Consensus 460 I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~~LF~gTI~eNI~~g~~~~~ 539 (680)
++.+..+.|+||+||||||+++.|+.-| |-+.|+--+ -+|+.+. ..+ .....+.+.+.-| ...
T Consensus 5 ~~~~~iI~l~G~pGSGKsT~a~~La~~~----g~~~is~g~-------llr~~~~---~~~-~~~~~~~~~~~~~--~~~ 67 (194)
T d3adka_ 5 LKKSKIIFVVGGPGSGKGTQCEKIVQKY----GYTHLSTGD-------LLRAEVS---SGS-ARGKMLSEIMEKG--QLV 67 (194)
T ss_dssp HHTSCEEEEEECTTSSHHHHHHHHHHHT----CCEEEEHHH-------HHHHHHH---HTC-HHHHHHHHHHTTT--CCC
T ss_pred ccCCcEEEEECCCCCCHHHHHHHHHHHh----CCeeEeccH-------HHHHHHH---HhH-hhhhhhHHHHhhc--cCC
Confidence 4678899999999999999999999876 555554321 1332211 111 1223455555444 246
Q ss_pred CHHHHHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHHHHHccCCCeEEEeCC
Q 005740 540 KNEDIEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIARAILRDPAILLLDEA 599 (680)
Q Consensus 540 s~eei~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIARAll~~p~ILILDEa 599 (680)
+++-+....+.. +...+...+-.+=+ ....-..|--.+.+.+.....+..+|.+
T Consensus 68 ~~~~~~~~~~~~-----l~~~~~~~~g~ild-g~pr~~~qa~~~~~~~~~~~~~~~~~~~ 121 (194)
T d3adka_ 68 PLETVLDMLRDA-----MVAKVDTSKGFLID-GYPREVKQGEEFERKIGQPTLLLYVDAG 121 (194)
T ss_dssp CHHHHHHHHHHH-----HHTTTTTCSCEEEE-SCCSSHHHHHHHHHHTCCCSEEEEEECC
T ss_pred chheeeeehhhh-----hhhcccccccceee-eccchhHHHHHHHHHhCCccchhccccc
Confidence 777666654432 33333222212211 3556677777777777666566666654
No 74
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=96.02 E-value=0.0015 Score=59.20 Aligned_cols=22 Identities=45% Similarity=0.584 Sum_probs=20.1
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
+|+|+|++|+|||||++-|.|-
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC-
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 6999999999999999999874
No 75
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.00 E-value=0.0015 Score=59.64 Aligned_cols=23 Identities=30% Similarity=0.615 Sum_probs=20.9
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
++.|+||+||||||++++|+--|
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAY 24 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 47899999999999999997766
No 76
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.99 E-value=0.018 Score=55.23 Aligned_cols=47 Identities=17% Similarity=0.199 Sum_probs=32.6
Q ss_pred cCCCeEEEeCCCCCCCHHHHHHHHHH-HHHHhccCCCCeEEEEEecCcch
Q 005740 589 RDPAILLLDEATSALDSESEHYVKGV-LHALRNDCKTKRTVIVIAHRLST 637 (680)
Q Consensus 589 ~~p~ILILDEaTSaLD~~tE~~I~~~-l~~l~~~~~~~~TvIvIaHRlst 637 (680)
.+..++|+||.-++=|++.-..+-.+ ++.+.. ..+..+++.||-...
T Consensus 119 ~~~sLvliDE~~~gT~~~eg~~l~~a~l~~l~~--~~~~~~i~tTH~~~l 166 (234)
T d1wb9a2 119 TEYSLVLMDEIGRGTSTYDGLSLAWACAENLAN--KIKALTLFATHYFEL 166 (234)
T ss_dssp CTTEEEEEESCCCCSSSSHHHHHHHHHHHHHHH--TTCCEEEEECSCGGG
T ss_pred ccccEEeecccccCCChhhhhHHHHHhhhhhhc--cccceEEEecchHHH
Confidence 34569999999999999877666555 445533 234677888886543
No 77
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.98 E-value=0.0015 Score=60.41 Aligned_cols=70 Identities=26% Similarity=0.217 Sum_probs=45.7
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEEEEccCCcCccccHHHHHhcCCCCCCCHHHH
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIGFVGQEPQLLQMDIKSNIMYGCPKDVKNEDI 544 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~~LF~gTI~eNI~~g~~~~~s~eei 544 (680)
+|.|+||+||||||.++.|+.-| |-..|+- -+-+|+.+ -++...+...+.+.+.-| ..+.|+.+
T Consensus 3 iI~i~GppGSGKsT~a~~La~~~----g~~~i~~-------g~llR~~~---~~~~~~~~~~~~~~~~~~--~~v~d~~~ 66 (194)
T d1teva_ 3 VVFVLGGPGAGKGTQCARIVEKY----GYTHLSA-------GELLRDER---KNPDSQYGELIEKYIKEG--KIVPVEIT 66 (194)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH----CCEEEEH-------HHHHHHHH---HCTTSTTHHHHHHHHHTT--CCCCHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh----CCceEcH-------HHHHHHHH---HhhhhhHHHHHHHHHhcC--Cccccchh
Confidence 58999999999999999998766 4455532 12244322 233344555667777656 25777777
Q ss_pred HHHHHH
Q 005740 545 EWAAKQ 550 (680)
Q Consensus 545 ~~A~~~ 550 (680)
....+.
T Consensus 67 ~~~~~~ 72 (194)
T d1teva_ 67 ISLLKR 72 (194)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 766554
No 78
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=95.97 E-value=0.022 Score=54.22 Aligned_cols=48 Identities=17% Similarity=0.249 Sum_probs=33.9
Q ss_pred cCCCeEEEeCCCCCCCHHHHHHHHHHH-HHHhccCCCCeEEEEEecCcchHh
Q 005740 589 RDPAILLLDEATSALDSESEHYVKGVL-HALRNDCKTKRTVIVIAHRLSTIK 639 (680)
Q Consensus 589 ~~p~ILILDEaTSaLD~~tE~~I~~~l-~~l~~~~~~~~TvIvIaHRlsti~ 639 (680)
.+..++++||.-++=|++.-..+-.++ +.+.+ .+.+++++||-.+...
T Consensus 113 ~~~sLvliDE~~~gT~~~eg~ala~aile~L~~---~~~~~i~tTH~~eL~~ 161 (224)
T d1ewqa2 113 TENSLVLLDEVGRGTSSLDGVAIATAVAEALHE---RRAYTLFATHYFELTA 161 (224)
T ss_dssp CTTEEEEEESTTTTSCHHHHHHHHHHHHHHHHH---HTCEEEEECCCHHHHT
T ss_pred CCCcEEeecccccCcchhhhcchHHHHHHHHhh---cCcceEEeeechhhhh
Confidence 455699999999999997666555544 33332 2578999999865543
No 79
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.94 E-value=0.0016 Score=60.74 Aligned_cols=42 Identities=24% Similarity=0.463 Sum_probs=29.5
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccE
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKI 513 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I 513 (680)
.|++||.+||||||+++.|++.+.- .|.+..-++.+.+|+.+
T Consensus 4 li~l~GlpgsGKSTla~~L~~~l~~-------~~~~~~~~~~D~~r~~~ 45 (213)
T d1bifa1 4 LIVMVGLPARGKTYISKKLTRYLNF-------IGVPTREFNVGQYRRDM 45 (213)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHH-------TTCCEEEEEHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHh-------cCCCCeEEcccceehhh
Confidence 5899999999999999999987652 23333334455555544
No 80
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.93 E-value=0.0011 Score=63.36 Aligned_cols=27 Identities=44% Similarity=0.591 Sum_probs=24.8
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
+++.|+|-|+.||||||++++|...++
T Consensus 1 ~~k~I~ieG~dGsGKST~~~~L~~~l~ 27 (241)
T d1p5zb_ 1 RIKKISIEGNIAAGKSTFVNILKQLCE 27 (241)
T ss_dssp CCEEEEEECSTTSSHHHHHTTTGGGCT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 478999999999999999999999874
No 81
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=95.92 E-value=0.0016 Score=61.44 Aligned_cols=24 Identities=33% Similarity=0.501 Sum_probs=21.6
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
.|||-||+||||||++++|+.-|.
T Consensus 5 ~IaIdGp~GsGKgT~ak~La~~lg 28 (223)
T d1q3ta_ 5 QIAIDGPASSGKSTVAKIIAKDFG 28 (223)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 588999999999999999998774
No 82
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.92 E-value=0.0036 Score=56.50 Aligned_cols=29 Identities=34% Similarity=0.551 Sum_probs=23.7
Q ss_pred EEEEeCCCCCcHHHHHHHHhc-----CCCCCCce
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR-----LYEPSDGQ 493 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r-----~y~p~~G~ 493 (680)
+++++|.+|+|||||++-+.+ -|.|+-|.
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~~~f~~~~~~T~~~ 37 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVED 37 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHTCCCCSSCCCCSCE
T ss_pred EEEEECCCCCCHHHHHHHHHhCCCCCccCcceee
Confidence 589999999999999986654 46777663
No 83
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=95.92 E-value=0.0011 Score=60.83 Aligned_cols=22 Identities=32% Similarity=0.529 Sum_probs=19.8
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
-|||||++++|||||++.|.|-
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~~ 24 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSSA 24 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEEE
T ss_pred eEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999763
No 84
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=95.88 E-value=0.0018 Score=59.43 Aligned_cols=23 Identities=30% Similarity=0.653 Sum_probs=21.4
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
++.|+||.||||||++++|+.-|
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKY 24 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 57899999999999999999877
No 85
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=95.88 E-value=0.0018 Score=57.67 Aligned_cols=42 Identities=14% Similarity=0.057 Sum_probs=27.9
Q ss_pred ChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHH
Q 005740 574 SGGQKQRIAIARAILRDPAILLLDEATSALDSESEHYVKGVLHA 617 (680)
Q Consensus 574 SGGQrQRIaIARAll~~p~ILILDEaTSaLD~~tE~~I~~~l~~ 617 (680)
...+..+-.+++....+..+=++ +|||.+.+.-.++.+.|.+
T Consensus 122 ~~~~~i~~~~~~~~~~~~~~~~~--~~SA~~g~gv~e~~~~l~~ 163 (169)
T d1upta_ 122 MTSSEMANSLGLPALKDRKWQIF--KTSATKGTGLDEAMEWLVE 163 (169)
T ss_dssp CCHHHHHHHHTGGGCTTSCEEEE--ECCTTTCTTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCEEE--EEeCCCCCCHHHHHHHHHH
Confidence 34455555666767766666555 8899988877766666644
No 86
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=95.88 E-value=0.0018 Score=57.26 Aligned_cols=21 Identities=33% Similarity=0.498 Sum_probs=19.0
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
+|.|||++|+|||||++-|.+
T Consensus 2 kivlvG~~~vGKSsLi~~l~~ 22 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKL 22 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 689999999999999998864
No 87
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=95.87 E-value=0.0019 Score=59.04 Aligned_cols=22 Identities=55% Similarity=0.690 Sum_probs=20.7
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
+|||||++|+|||||++-|.|-
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 6999999999999999999875
No 88
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.83 E-value=0.0025 Score=58.80 Aligned_cols=26 Identities=23% Similarity=0.373 Sum_probs=23.6
Q ss_pred eeCCcEEEEeCCCCCcHHHHHHHHhc
Q 005740 460 IEANEVVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 460 I~~Ge~vAIVG~SGsGKSTL~~LL~r 485 (680)
+++|+.+.|.||+||||||++.-++.
T Consensus 20 i~~G~v~~i~G~~GsGKT~l~l~la~ 45 (242)
T d1n0wa_ 20 IETGSITEMFGEFRTGKTQICHTLAV 45 (242)
T ss_dssp EETTSEEEEECCTTSSHHHHHHHHHH
T ss_pred CcCCEEEEEEeCCCCCHHHHHHHHHH
Confidence 89999999999999999999876654
No 89
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=95.82 E-value=0.0017 Score=60.04 Aligned_cols=22 Identities=45% Similarity=0.616 Sum_probs=20.1
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
.+||+|++||||||+++.|..+
T Consensus 5 IIgitG~~gSGKstva~~l~~~ 26 (191)
T d1uf9a_ 5 IIGITGNIGSGKSTVAALLRSW 26 (191)
T ss_dssp EEEEEECTTSCHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHC
Confidence 5899999999999999999764
No 90
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=95.82 E-value=0.0015 Score=60.37 Aligned_cols=23 Identities=39% Similarity=0.489 Sum_probs=21.2
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
++.|.||+||||||++++|..-|
T Consensus 5 ~I~i~GppGsGKsT~a~~La~~~ 27 (189)
T d1zaka1 5 KVMISGAPASGKGTQCELIKTKY 27 (189)
T ss_dssp CEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 47899999999999999998877
No 91
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=95.82 E-value=0.0019 Score=57.68 Aligned_cols=76 Identities=12% Similarity=0.130 Sum_probs=42.0
Q ss_pred ChHHHHHHHHHHHHccCCCeEEEe-CCCCCCCHHHHHH-HHHHHHHHhccCCCCeEEEEEecCcchHhhcCEEEEEeCCE
Q 005740 574 SGGQKQRIAIARAILRDPAILLLD-EATSALDSESEHY-VKGVLHALRNDCKTKRTVIVIAHRLSTIKAVDRIVVIDDGR 651 (680)
Q Consensus 574 SGGQrQRIaIARAll~~p~ILILD-EaTSaLD~~tE~~-I~~~l~~l~~~~~~~~TvIvIaHRlsti~~aD~I~vl~~G~ 651 (680)
.+.+...+..++..++++++++++ ++++. +...+.. ..+.++.. ..++.+|+|.............--.++-.
T Consensus 64 ~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~----~~~~~iilv~NK~Dl~~~~~~~~~~~~~~ 138 (161)
T d2gj8a1 64 DEVERIGIERAWQEIEQADRVLFMVDGTTT-DAVDPAEIWPEFIARL----PAKLPITVVRNKADITGETLGMSEVNGHA 138 (161)
T ss_dssp SHHHHHHHHHHHHHHHTCSEEEEEEETTTC-CCCSHHHHCHHHHHHS----CTTCCEEEEEECHHHHCCCCEEEEETTEE
T ss_pred ccchhHHHHHHHHHHHhccccceeeccccc-cchhhhhhhhhhhhhc----ccccceeeccchhhhhhhHHHHHHhCCCc
Confidence 445666677788888899887664 33332 2222222 23334433 34577888888877665544444444444
Q ss_pred EEE
Q 005740 652 IIE 654 (680)
Q Consensus 652 Ive 654 (680)
+++
T Consensus 139 ~~~ 141 (161)
T d2gj8a1 139 LIR 141 (161)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 92
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.81 E-value=0.0019 Score=60.19 Aligned_cols=22 Identities=32% Similarity=0.487 Sum_probs=20.4
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
+|+|||++|+|||||++.|.+-
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 7999999999999999999863
No 93
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=95.80 E-value=0.0012 Score=60.14 Aligned_cols=25 Identities=24% Similarity=0.512 Sum_probs=21.7
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
+.+.|.|++||||||++++|...+.
T Consensus 2 kiivi~G~~GsGKTT~~~~La~~L~ 26 (194)
T d1nksa_ 2 KIGIVTGIPGVGKSTVLAKVKEILD 26 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3567889999999999999988764
No 94
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=95.77 E-value=0.0021 Score=60.41 Aligned_cols=24 Identities=33% Similarity=0.545 Sum_probs=22.1
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
.|+|-||+||||||+.++|..-|.
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~g 28 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQ 28 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 799999999999999999987774
No 95
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.77 E-value=0.0018 Score=58.57 Aligned_cols=23 Identities=43% Similarity=0.567 Sum_probs=20.3
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
.+.++|++||||||+.++|..-+
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l 25 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKAL 25 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHH
T ss_pred cEEEECCCCCCHHHHHHHHHHHh
Confidence 36788999999999999998766
No 96
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.74 E-value=0.0022 Score=56.57 Aligned_cols=22 Identities=27% Similarity=0.517 Sum_probs=20.4
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
+++|||++|+|||||++-|.+=
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 6899999999999999999874
No 97
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=95.73 E-value=0.0015 Score=59.74 Aligned_cols=21 Identities=33% Similarity=0.626 Sum_probs=19.6
Q ss_pred EEEeCCCCCcHHHHHHHHhcC
Q 005740 466 VAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r~ 486 (680)
|||+|++|+|||||++.|.|-
T Consensus 4 VaivG~~nvGKSTLin~L~~~ 24 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTRA 24 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCSS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 899999999999999999864
No 98
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=95.70 E-value=0.0014 Score=66.07 Aligned_cols=48 Identities=19% Similarity=0.275 Sum_probs=34.9
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEEEEccCCcCccccHHH
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIGFVGQEPQLLQMDIKS 529 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~~LF~gTI~e 529 (680)
.|||.|+|||||||+++.|.....-..+ ..++.+|++|.++.....++
T Consensus 82 iIGIaG~sgSGKSTla~~L~~lL~~~~~-----------------~~~v~~Is~D~F~~~~~~l~ 129 (308)
T d1sq5a_ 82 IISIAGSVAVGKSTTARVLQALLSRWPE-----------------HRRVELITTDGFLHPNQVLK 129 (308)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHTTSTT-----------------CCCEEEEEGGGGBCCHHHHH
T ss_pred EEEEeCCCCCCCcHHHHHHHHHHhhhcC-----------------CCceEEEeeeeeECCchHHH
Confidence 4899999999999999999877631100 12477888888887655543
No 99
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.70 E-value=0.0024 Score=57.96 Aligned_cols=21 Identities=52% Similarity=0.702 Sum_probs=19.8
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
.|+|+|.+|+|||||++.|.|
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 489999999999999999987
No 100
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.63 E-value=0.0045 Score=55.68 Aligned_cols=37 Identities=27% Similarity=0.502 Sum_probs=27.7
Q ss_pred cEEEEeCCCCCcHHHHHHHHhc-----CCCCCCce-----EEECCee
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLR-----LYEPSDGQ-----IYIDGFP 500 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r-----~y~p~~G~-----I~idG~d 500 (680)
-+|+|+|++|+|||||++-+.+ -|.|+-|. +.+||.+
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~ 51 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQE 51 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHSCCCSCCCSSCCEEEEEEEEETTEE
T ss_pred eEEEEECCCCcCHHHHHHHHHhCCCCcccCcceecccceEEecCcEE
Confidence 4799999999999999998753 45566554 4566654
No 101
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=95.62 E-value=0.0019 Score=58.48 Aligned_cols=25 Identities=24% Similarity=0.437 Sum_probs=21.4
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
--+++|||++|+|||||++-|.+=.
T Consensus 13 ~~kI~lvG~~~vGKTsLl~~l~~~~ 37 (186)
T d1f6ba_ 13 TGKLVFLGLDNAGKTTLLHMLKDDR 37 (186)
T ss_dssp CEEEEEEEETTSSHHHHHHHHSCC-
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCC
Confidence 3479999999999999999997754
No 102
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=95.59 E-value=0.0024 Score=58.28 Aligned_cols=23 Identities=22% Similarity=0.481 Sum_probs=20.9
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
++.|+||+||||||++++|+.-|
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~ 24 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKY 24 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 57899999999999999998766
No 103
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=95.56 E-value=0.0028 Score=60.32 Aligned_cols=23 Identities=39% Similarity=0.608 Sum_probs=20.6
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
.|+|+|+.|||||||++-|.+..
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~~ 24 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRYL 24 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHHHHHHH
Confidence 58999999999999999998754
No 104
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=95.53 E-value=0.0023 Score=59.20 Aligned_cols=24 Identities=38% Similarity=0.465 Sum_probs=22.0
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
-.|+|-|++||||||++++|.+.+
T Consensus 10 ~~I~ieG~~GsGKTTl~~~L~~~l 33 (197)
T d2vp4a1 10 FTVLIEGNIGSGKTTYLNHFEKYK 33 (197)
T ss_dssp EEEEEECSTTSCHHHHHHTTGGGT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHh
Confidence 479999999999999999999866
No 105
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=95.50 E-value=0.003 Score=57.94 Aligned_cols=21 Identities=29% Similarity=0.517 Sum_probs=19.7
Q ss_pred EEEeCCCCCcHHHHHHHHhcC
Q 005740 466 VAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r~ 486 (680)
|||||+..+|||||++.|.+.
T Consensus 8 IaiiG~~naGKSTL~n~L~~~ 28 (179)
T d1wb1a4 8 LGIFGHIDHGKTTLSKVLTEI 28 (179)
T ss_dssp EEEEECTTSSHHHHHHHHHTT
T ss_pred EEEEeCCCCcHHHHHHHHHHh
Confidence 999999999999999999864
No 106
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=95.46 E-value=0.0017 Score=59.07 Aligned_cols=24 Identities=38% Similarity=0.351 Sum_probs=20.9
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
=+|+|||++++|||||++.|.+-.
T Consensus 17 ~~I~lvG~~NvGKSSL~n~L~~~~ 40 (188)
T d1puia_ 17 IEVAFAGRSNAGKSSALNTLTNQK 40 (188)
T ss_dssp EEEEEEECTTSSHHHHHTTTCCC-
T ss_pred CEEEEECCCCCCHHHHHHHHhCCC
Confidence 359999999999999999998754
No 107
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=95.44 E-value=0.0035 Score=58.89 Aligned_cols=21 Identities=43% Similarity=0.669 Sum_probs=19.2
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
.+||+|.+||||||+++.|..
T Consensus 4 iIgITG~igSGKStv~~~l~~ 24 (205)
T d1jjva_ 4 IVGLTGGIGSGKTTIANLFTD 24 (205)
T ss_dssp EEEEECSTTSCHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 589999999999999999864
No 108
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=95.41 E-value=0.003 Score=61.79 Aligned_cols=23 Identities=30% Similarity=0.486 Sum_probs=21.0
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+++|+|++|+|||||+|.|+|--
T Consensus 34 ~I~LvG~tg~GKSSliN~ilg~~ 56 (257)
T d1h65a_ 34 TILVMGKGGVGKSSTVNSIIGER 56 (257)
T ss_dssp EEEEEESTTSSHHHHHHHHHTSC
T ss_pred EEEEECCCCCcHHHHHHHHhCCC
Confidence 49999999999999999999853
No 109
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.40 E-value=0.0098 Score=56.14 Aligned_cols=21 Identities=29% Similarity=0.450 Sum_probs=19.4
Q ss_pred EEEeCCCCCcHHHHHHHHhcC
Q 005740 466 VAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r~ 486 (680)
+-+.||+|+||||+++++++-
T Consensus 38 lLl~Gp~G~GKttl~~~la~~ 58 (227)
T d1sxjc2 38 LLFYGPPGTGKTSTIVALARE 58 (227)
T ss_dssp EEEECSSSSSHHHHHHHHHHH
T ss_pred EEEECCCCCChhHHHHHHHHH
Confidence 679999999999999999974
No 110
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.40 E-value=0.0036 Score=57.21 Aligned_cols=23 Identities=30% Similarity=0.352 Sum_probs=21.1
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
.+.|.||+||||||+.+.|+.-|
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~ 24 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKL 24 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 47899999999999999998777
No 111
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=95.40 E-value=0.0046 Score=55.34 Aligned_cols=23 Identities=22% Similarity=0.338 Sum_probs=20.8
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+++|||++|||||||++-|.+-+
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~~ 26 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGED 26 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTCC
T ss_pred EEEEECCCCCCHHHHHHHHcCCC
Confidence 68999999999999999998754
No 112
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.38 E-value=0.004 Score=56.36 Aligned_cols=21 Identities=33% Similarity=0.550 Sum_probs=18.8
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
++++||++|+|||||++-+.+
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHc
Confidence 489999999999999998764
No 113
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.36 E-value=0.007 Score=54.57 Aligned_cols=28 Identities=39% Similarity=0.568 Sum_probs=23.2
Q ss_pred EEEEeCCCCCcHHHHHHHHh-----cCCCCCCc
Q 005740 465 VVAIVGLSGSGKSTFVNLLL-----RLYEPSDG 492 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~-----r~y~p~~G 492 (680)
++.+||.+|+|||||++-+. .-|+|+-|
T Consensus 4 Ki~lvG~~~vGKTsli~r~~~~~f~~~~~pTi~ 36 (168)
T d2atva1 4 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLE 36 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSCCCSCCCTTCC
T ss_pred EEEEECCCCCCHHHHHHHHHhCCCCCccCCcee
Confidence 58999999999999999877 35667655
No 114
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.32 E-value=0.0074 Score=54.33 Aligned_cols=28 Identities=29% Similarity=0.423 Sum_probs=22.2
Q ss_pred EEEEeCCCCCcHHHHHHHHh-cC----CCCCCc
Q 005740 465 VVAIVGLSGSGKSTFVNLLL-RL----YEPSDG 492 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~-r~----y~p~~G 492 (680)
++++||.+|+|||||++-+. +- |+|+.|
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~~~f~~~~~~t~~ 37 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIG 37 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSCCCTTCCCCSS
T ss_pred EEEEECCCCcCHHHHHHHHHhCCCCcccccccc
Confidence 68999999999999999554 33 456666
No 115
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=95.26 E-value=0.0077 Score=54.30 Aligned_cols=29 Identities=34% Similarity=0.586 Sum_probs=23.9
Q ss_pred EEEEeCCCCCcHHHHHHHHh-----cCCCCCCce
Q 005740 465 VVAIVGLSGSGKSTFVNLLL-----RLYEPSDGQ 493 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~-----r~y~p~~G~ 493 (680)
+++++|.+|+|||||++-+. .-|.|+.|.
T Consensus 6 KivlvG~~~vGKTsli~~~~~~~f~~~~~~T~~~ 39 (168)
T d1u8za_ 6 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKAD 39 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSCCCSCCCTTCCE
T ss_pred EEEEECCCCcCHHHHHHHHHhCCCCcccCCcccc
Confidence 79999999999999999875 356777664
No 116
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=95.24 E-value=0.0014 Score=58.43 Aligned_cols=21 Identities=48% Similarity=0.629 Sum_probs=19.8
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
+||++|++|+|||||++.|.|
T Consensus 2 kI~liG~~n~GKSSLin~l~g 22 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLN 22 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999999986
No 117
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.18 E-value=0.0078 Score=54.26 Aligned_cols=31 Identities=29% Similarity=0.528 Sum_probs=24.1
Q ss_pred EEEEeCCCCCcHHHHHHHHhc-----CCCCCCceEE
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR-----LYEPSDGQIY 495 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r-----~y~p~~G~I~ 495 (680)
++++||.+|+|||||++-+.. -|.|+.|...
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~~~f~~~~~~t~~~~~ 42 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSY 42 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSCCCSSCCTTCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHhCCCCcccCcccccce
Confidence 699999999999999986543 4567777543
No 118
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.11 E-value=0.0047 Score=58.30 Aligned_cols=28 Identities=21% Similarity=0.313 Sum_probs=24.8
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
++|..|+|-|+-||||||++++|..-+.
T Consensus 1 ~rG~lI~ieG~dGsGKsT~~~~L~~~L~ 28 (209)
T d1nn5a_ 1 RRGALIVLEGVDRAGKSTQSRKLVEALC 28 (209)
T ss_dssp CCCCEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred CCeeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 4799999999999999999999977553
No 119
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=95.05 E-value=0.017 Score=56.55 Aligned_cols=54 Identities=24% Similarity=0.380 Sum_probs=39.6
Q ss_pred EeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCc-eEEECCeeCCCCCHHHhhccEEE
Q 005740 459 TIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDG-QIYIDGFPLTDLDIRWLREKIGF 515 (680)
Q Consensus 459 ~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G-~I~idG~di~~~~~~~LR~~I~~ 515 (680)
=++.|..+-|.||+||||||++..++.-..-..| -++||... .++.+.++ ++|+
T Consensus 53 Gip~g~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~--~~~~~~a~-~~Gv 107 (268)
T d1xp8a1 53 GIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEH--ALDPVYAR-ALGV 107 (268)
T ss_dssp SEETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSC--CCCHHHHH-HTTC
T ss_pred CccCceEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCc--cCCHHHHH-HhCC
Confidence 4789999999999999999999888776654444 56777653 45665443 4564
No 120
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.03 E-value=0.0089 Score=53.82 Aligned_cols=24 Identities=25% Similarity=0.455 Sum_probs=20.3
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
+++++|.+|+|||||++-+.+...
T Consensus 3 Ki~lvG~~~vGKTsLi~~~~~~~~ 26 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARIFGGVED 26 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHTC--
T ss_pred EEEEECCCCcCHHHHHHHHhCCcc
Confidence 589999999999999999887644
No 121
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=95.01 E-value=0.0048 Score=58.33 Aligned_cols=27 Identities=41% Similarity=0.661 Sum_probs=22.6
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
++..+++|||+|+||||.+-=|+..+.
T Consensus 5 ~~~vi~lvGptGvGKTTTiaKLA~~~~ 31 (207)
T d1okkd2 5 KGRVVLVVGVNGVGKTTTIAKLGRYYQ 31 (207)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 478999999999999988766777665
No 122
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=95.00 E-value=0.0055 Score=56.76 Aligned_cols=108 Identities=20% Similarity=0.247 Sum_probs=57.1
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHH-HhhccEEEEccCCcCccccHHHHHhcCCCCCCCHHH
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIR-WLREKIGFVGQEPQLLQMDIKSNIMYGCPKDVKNED 543 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~-~LR~~I~~V~Qd~~LF~gTI~eNI~~g~~~~~s~ee 543 (680)
++.|+||.||||||+.+.|+.-| |-+.| +.. -+|+.+ ++..-+..-+.+.+.-|. -..++.
T Consensus 8 rIiliG~PGSGKtT~a~~La~~~----g~~~i--------s~gdllr~~~----~~~~~~~~~~~~~~~~~~--~v~~~~ 69 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVSSRITKHF----ELKHL--------SSGDLLRDNM----LRGTEIGVLAKTFIDQGK--LIPDDV 69 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHB----CCEEE--------EHHHHHHHHH----HTTCHHHHHHHHHHHTTC--CCCHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHH----CCeEE--------cHHHHHHHHH----HhhhhhhHHHHHHhhhhh--hccchh
Confidence 68899999999999999999876 33444 332 234433 122223334566666662 355655
Q ss_pred HHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHHHHHccCCCeEEEeCC
Q 005740 544 IEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIARAILRDPAILLLDEA 599 (680)
Q Consensus 544 i~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIARAll~~p~ILILDEa 599 (680)
+....+.. +.. . ....-.+.+ +..-..|.-++.+. +.-..++.||-+
T Consensus 70 ~~~l~~~~-~~~----~-~~~~~ildG--fPr~~~q~~~l~~~-~~~~~vi~L~v~ 116 (189)
T d2ak3a1 70 MTRLVLHE-LKN----L-TQYNWLLDG--FPRTLPQAEALDRA-YQIDTVINLNVP 116 (189)
T ss_dssp HHHHHHHH-HHH----H-TTSCEEEES--CCCSHHHHHHHHTT-CCCCEEEEEECC
T ss_pred hhhhhhhh-hhh----h-hhcCccccc--ccchhhHHHHhhhc-CcceEEEEEecc
Confidence 55544432 111 1 111112222 22234565566552 333445678865
No 123
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=94.98 E-value=0.0055 Score=57.43 Aligned_cols=27 Identities=33% Similarity=0.564 Sum_probs=24.3
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
+|+.|+|-|+-||||||++++|...++
T Consensus 1 rgkfIviEG~dGsGKsT~~~~L~~~L~ 27 (210)
T d4tmka_ 1 RSKYIVIEGLEGAGKTTARNVVVETLE 27 (210)
T ss_dssp CCCEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 589999999999999999999987553
No 124
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.91 E-value=0.0078 Score=53.86 Aligned_cols=20 Identities=25% Similarity=0.421 Sum_probs=17.7
Q ss_pred EEEEeCCCCCcHHHHHHHHh
Q 005740 465 VVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~ 484 (680)
+|++||++|+|||||++-+.
T Consensus 4 Kv~liG~~~vGKSsLi~rl~ 23 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMIQRYC 23 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 48999999999999998555
No 125
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.84 E-value=0.0062 Score=56.76 Aligned_cols=22 Identities=41% Similarity=0.540 Sum_probs=20.0
Q ss_pred cEEEEeCCCCCcHHHHHHHHhc
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r 485 (680)
+.|+|+|++|+|||||++-|.+
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~ 22 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLT 22 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHc
Confidence 4799999999999999998875
No 126
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.83 E-value=0.0066 Score=55.44 Aligned_cols=30 Identities=20% Similarity=0.299 Sum_probs=24.5
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDG 498 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG 498 (680)
++.|.||.||||||++++|+--| |-+.|+.
T Consensus 4 rIvl~G~pGSGKtT~a~~La~~~----g~~~i~~ 33 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPNLQERF----HAAHLAT 33 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH----CCEEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh----CCceEec
Confidence 47789999999999999999876 5555544
No 127
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=94.79 E-value=0.11 Score=48.65 Aligned_cols=26 Identities=38% Similarity=0.549 Sum_probs=21.2
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
...+++|||+|+||||.+--|+..|.
T Consensus 10 ~~vi~lvGp~GvGKTTTiaKLA~~~~ 35 (207)
T d1ls1a2 10 RNLWFLVGLQGSGKTTTAAKLALYYK 35 (207)
T ss_dssp SEEEEEECCTTTTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHH
Confidence 45789999999999988777776664
No 128
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.77 E-value=0.015 Score=52.53 Aligned_cols=23 Identities=35% Similarity=0.574 Sum_probs=20.4
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
++.+||.+|+|||||++.+.+-.
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~~~ 27 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAGVH 27 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHCCC
T ss_pred EEEEECCCCcCHHHHHHHHHhCc
Confidence 58999999999999999887654
No 129
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.74 E-value=0.011 Score=53.23 Aligned_cols=21 Identities=24% Similarity=0.544 Sum_probs=19.0
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
+++++|.+|+|||||++-+.+
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~ 27 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQ 27 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999998765
No 130
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=94.71 E-value=0.0058 Score=59.02 Aligned_cols=33 Identities=24% Similarity=0.388 Sum_probs=26.2
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDG 498 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG 498 (680)
.-+.++||+||||||+++.|++-+. .+-+.+|+
T Consensus 33 ~~ilL~GpPGtGKT~la~~la~~~~--~~~~~i~~ 65 (273)
T d1gvnb_ 33 TAFLLGGQPGSGKTSLRSAIFEETQ--GNVIVIDN 65 (273)
T ss_dssp EEEEEECCTTSCTHHHHHHHHHHTT--TCCEEECT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHhh--cceEEEec
Confidence 4588999999999999999999774 23455555
No 131
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=94.68 E-value=0.0074 Score=56.71 Aligned_cols=22 Identities=50% Similarity=0.647 Sum_probs=19.7
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
.+||+|..||||||+++.|..+
T Consensus 5 iIgitG~igSGKStv~~~l~~~ 26 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAFADL 26 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHHHT
T ss_pred EEEEECCCcCCHHHHHHHHHHC
Confidence 6899999999999999998644
No 132
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.67 E-value=0.011 Score=52.99 Aligned_cols=29 Identities=31% Similarity=0.572 Sum_probs=23.0
Q ss_pred EEEEeCCCCCcHHHHHHHHhc-----CCCCCCce
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR-----LYEPSDGQ 493 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r-----~y~p~~G~ 493 (680)
++++||++|+|||||++-+.+ -|+|+.|.
T Consensus 5 Ki~viG~~~vGKTsli~~l~~~~~~~~~~~~~~~ 38 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIED 38 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHCCCCCSCCCCSEE
T ss_pred EEEEECCCCCCHHHHHHHHHhCCCCCccCCccce
Confidence 599999999999999987753 35566653
No 133
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.63 E-value=0.013 Score=52.49 Aligned_cols=29 Identities=28% Similarity=0.523 Sum_probs=22.7
Q ss_pred EEEEeCCCCCcHHHHHHHHhc-----CCCCCCce
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR-----LYEPSDGQ 493 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r-----~y~p~~G~ 493 (680)
++++||.+|+|||||++-+.+ -|.|+-|.
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~~f~~~~~~t~~~ 38 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIED 38 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSCCCSCCCTTCCE
T ss_pred EEEEECCCCcCHHHHHHHHHhCCCCCccCCceee
Confidence 689999999999999987754 34555554
No 134
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.63 E-value=0.0075 Score=57.01 Aligned_cols=27 Identities=30% Similarity=0.525 Sum_probs=24.6
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
+|..|+|-|+-||||||++++|....+
T Consensus 2 kGk~I~iEG~DGsGKST~~~~L~~~L~ 28 (214)
T d1tmka_ 2 RGKLILIEGLDRTGKTTQCNILYKKLQ 28 (214)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred CeEEEEEECCCCCcHHHHHHHHHHHHH
Confidence 699999999999999999999986655
No 135
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=94.59 E-value=0.011 Score=54.29 Aligned_cols=32 Identities=34% Similarity=0.283 Sum_probs=24.1
Q ss_pred cccceeEEeeCCcEEEEeCCCCCcHHHHHHHHh
Q 005740 452 ILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 452 VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~ 484 (680)
.|+.--+.+ .|.-|.|+|+||+||||++--|.
T Consensus 4 ~lH~~~v~~-~g~gvl~~G~sG~GKStlal~l~ 35 (176)
T d1kkma_ 4 SMHGVLVDI-YGLGVLITGDSGVGKSETALELV 35 (176)
T ss_dssp EEEEEEEEE-TTEEEEEECCTTSCHHHHHHHHH
T ss_pred eEEEEEEEE-CCEEEEEEeCCCCCHHHHHHHHH
Confidence 455444433 48889999999999999886654
No 136
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=94.55 E-value=0.0075 Score=54.24 Aligned_cols=24 Identities=33% Similarity=0.470 Sum_probs=20.9
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhc
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r 485 (680)
+.=++++||.+|||||||++-|.+
T Consensus 14 k~~kI~vvG~~~~GKSsLi~rl~~ 37 (177)
T d1zj6a1 14 QEHKVIIVGLDNAGKTTILYQFSM 37 (177)
T ss_dssp SCEEEEEEESTTSSHHHHHHHHHT
T ss_pred CeEEEEEECCCCCCHHHHHHHHhc
Confidence 334799999999999999998876
No 137
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.53 E-value=0.0088 Score=56.43 Aligned_cols=25 Identities=24% Similarity=0.429 Sum_probs=22.8
Q ss_pred eeCCcEEEEeCCCCCcHHHHHHHHh
Q 005740 460 IEANEVVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 460 I~~Ge~vAIVG~SGsGKSTL~~LL~ 484 (680)
+++|+.+-|.|++||||||++.-++
T Consensus 31 i~~G~~~li~G~pGsGKT~l~lq~~ 55 (251)
T d1szpa2 31 VETGSITELFGEFRTGKSQLCHTLA 55 (251)
T ss_dssp EESSSEEEEEESTTSSHHHHHHHHT
T ss_pred CcCCeEEEEEcCCCCCHHHHHHHHH
Confidence 8999999999999999999986554
No 138
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.50 E-value=0.0091 Score=62.11 Aligned_cols=29 Identities=41% Similarity=0.646 Sum_probs=23.9
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCce
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDGQ 493 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G~ 493 (680)
.|||+|++|+|||||+|.|.|...-..|.
T Consensus 58 ~Iai~G~~n~GKSSLiNaL~G~~~~~~~~ 86 (400)
T d1tq4a_ 58 NVAVTGETGSGKSSFINTLRGIGNEEEGA 86 (400)
T ss_dssp EEEEEECTTSSHHHHHHHHHTCCTTSTTS
T ss_pred EEEEECCCCCCHHHHHHHHhCCCcCCCcc
Confidence 48999999999999999999976434443
No 139
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.50 E-value=0.0084 Score=54.00 Aligned_cols=20 Identities=30% Similarity=0.461 Sum_probs=18.0
Q ss_pred EEEEeCCCCCcHHHHHHHHh
Q 005740 465 VVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~ 484 (680)
++++||++|+|||||++-+.
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~ 26 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYA 26 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 48999999999999999665
No 140
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.41 E-value=0.016 Score=53.47 Aligned_cols=27 Identities=30% Similarity=0.413 Sum_probs=21.5
Q ss_pred EEEeCCCCCcHHHHHHHHhc-----CCCCCCc
Q 005740 466 VAIVGLSGSGKSTFVNLLLR-----LYEPSDG 492 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r-----~y~p~~G 492 (680)
++|||++|+|||||++-+.. -|.|+.|
T Consensus 9 ivvvG~~~vGKTsli~~l~~~~~~~~~~~t~~ 40 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSDDTYTNDYISTIG 40 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHHCCCCTTCCCSSC
T ss_pred EEEECCCCcCHHHHHHHHhhCCCCCCcCCccc
Confidence 99999999999999996653 3445555
No 141
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.40 E-value=0.016 Score=52.28 Aligned_cols=30 Identities=27% Similarity=0.312 Sum_probs=20.7
Q ss_pred EEEEeCCCCCcHHHHHHHHhc-----CCCCCCceE
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR-----LYEPSDGQI 494 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r-----~y~p~~G~I 494 (680)
++++||++|+|||||++-+.+ -|.|+-|.-
T Consensus 8 KI~vvG~~~vGKSSli~~~~~~~~~~~~~~t~~~~ 42 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVE 42 (174)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSCCCC----CCSEE
T ss_pred EEEEECCCCCCHHHHHHHHHhCCCCCccccceeee
Confidence 389999999999999976654 355555544
No 142
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=94.30 E-value=0.014 Score=53.61 Aligned_cols=32 Identities=31% Similarity=0.313 Sum_probs=26.3
Q ss_pred cccceeEEeeCCcEEEEeCCCCCcHHHHHHHHh
Q 005740 452 ILNHVCLTIEANEVVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 452 VL~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~ 484 (680)
.++.--+.+ .|.-+.|.|+||+||||++--|.
T Consensus 5 ~~H~~~v~~-~g~gvli~G~sG~GKS~lal~l~ 36 (177)
T d1knxa2 5 QIHGVLLEV-FGVGVLLTGRSGIGKSECALDLI 36 (177)
T ss_dssp EEEEEEEEE-TTEEEEEEESSSSSHHHHHHHHH
T ss_pred eEEEEEEEE-CCEEEEEEcCCCCCHHHHHHHHH
Confidence 566666666 78999999999999999986654
No 143
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=94.28 E-value=0.0053 Score=60.86 Aligned_cols=24 Identities=25% Similarity=0.588 Sum_probs=18.3
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
.|||.|+|||||||+.+.|...+.
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~ 29 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFR 29 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHHHHHh
Confidence 699999999999999998887553
No 144
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=94.28 E-value=0.0087 Score=53.98 Aligned_cols=21 Identities=29% Similarity=0.580 Sum_probs=18.9
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
++++||++|+|||||++-+.+
T Consensus 18 kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 18 RILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 689999999999999998754
No 145
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.27 E-value=0.019 Score=51.38 Aligned_cols=29 Identities=28% Similarity=0.460 Sum_probs=22.5
Q ss_pred EEEEeCCCCCcHHHHHHHHhc-----CCCCCCce
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR-----LYEPSDGQ 493 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r-----~y~p~~G~ 493 (680)
+++|||.+|+|||||++-+.. -|.|+.|.
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~~~f~~~~~~t~~~ 39 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGA 39 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSCCCTTCCCCCSE
T ss_pred EEEEECCCCcCHHHHHHHHHhCCCCccccccccc
Confidence 589999999999999988763 34455543
No 146
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.26 E-value=0.0087 Score=57.00 Aligned_cols=24 Identities=33% Similarity=0.588 Sum_probs=21.9
Q ss_pred eeCCcEEEEeCCCCCcHHHHHHHH
Q 005740 460 IEANEVVAIVGLSGSGKSTFVNLL 483 (680)
Q Consensus 460 I~~Ge~vAIVG~SGsGKSTL~~LL 483 (680)
+++|+.+-|.|++||||||++--+
T Consensus 33 lp~G~~~li~G~pGsGKT~~~lq~ 56 (254)
T d1pzna2 33 IETQAITEVFGEFGSGKTQLAHTL 56 (254)
T ss_dssp EESSEEEEEEESTTSSHHHHHHHH
T ss_pred ccCCEEEEEEcCCCCCHHHHHHHH
Confidence 899999999999999999997644
No 147
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.23 E-value=0.011 Score=53.90 Aligned_cols=21 Identities=33% Similarity=0.441 Sum_probs=18.7
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
+++|||++|+|||||++-+.+
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhc
Confidence 389999999999999988764
No 148
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.18 E-value=0.02 Score=51.51 Aligned_cols=29 Identities=28% Similarity=0.494 Sum_probs=23.4
Q ss_pred EEEEeCCCCCcHHHHHHHHhc-----CCCCCCce
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR-----LYEPSDGQ 493 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r-----~y~p~~G~ 493 (680)
++.+||.+|+|||||++-+.+ -|+|+.|.
T Consensus 6 Ki~lvG~~~vGKTsll~~~~~~~~~~~~~~t~~~ 39 (169)
T d1x1ra1 6 KLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIED 39 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSSCCTTCCTTCCE
T ss_pred EEEEECCCCcCHHHHHHHHHhCCCCcccCcceee
Confidence 588999999999999997764 46676654
No 149
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=94.16 E-value=0.011 Score=52.82 Aligned_cols=20 Identities=50% Similarity=0.785 Sum_probs=17.9
Q ss_pred EEEEeCCCCCcHHHHHHHHh
Q 005740 465 VVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~ 484 (680)
+++++|++|+|||||++-+.
T Consensus 4 ki~i~G~~~~GKTsLl~~l~ 23 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIA 23 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 58999999999999999664
No 150
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.16 E-value=0.018 Score=51.26 Aligned_cols=28 Identities=18% Similarity=0.458 Sum_probs=22.7
Q ss_pred EEEEeCCCCCcHHHHHHHHhc-----CCCCCCc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR-----LYEPSDG 492 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r-----~y~p~~G 492 (680)
+|++||.+|+|||||++-+.+ -|+|+.|
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~~~~~~~~~~~~~ 34 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIG 34 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSCCCSSCCCCCS
T ss_pred EEEEECCCCcCHHHHHHHHHhCCCCCcccccee
Confidence 689999999999999998764 4455555
No 151
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.15 E-value=0.011 Score=53.90 Aligned_cols=20 Identities=40% Similarity=0.625 Sum_probs=18.1
Q ss_pred EEEEeCCCCCcHHHHHHHHh
Q 005740 465 VVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~ 484 (680)
+|+++|.+|+|||||++-+.
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~ 23 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYV 23 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 58999999999999998666
No 152
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=94.13 E-value=0.0062 Score=61.66 Aligned_cols=27 Identities=30% Similarity=0.418 Sum_probs=23.5
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCCCC
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLYEP 489 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y~p 489 (680)
.-+|||+|+.|+|||||++-|.+.+.-
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~~~ 80 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLLIR 80 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred ceEEEeeCCCCCCHHHHHHHHHHHHHh
Confidence 457999999999999999999877643
No 153
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.09 E-value=0.012 Score=55.82 Aligned_cols=25 Identities=24% Similarity=0.336 Sum_probs=23.1
Q ss_pred eeCCcEEEEeCCCCCcHHHHHHHHh
Q 005740 460 IEANEVVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 460 I~~Ge~vAIVG~SGsGKSTL~~LL~ 484 (680)
|++|+.+-|.|++||||||++.-++
T Consensus 34 ip~G~~~~i~G~~GsGKT~lalq~~ 58 (258)
T d1v5wa_ 34 IESMAITEAFGEFRTGKTQLSHTLC 58 (258)
T ss_dssp BCSSEEEEEECCTTCTHHHHHHHHH
T ss_pred CcCCEEEEEECCCCCCHHHHHHHHH
Confidence 8999999999999999999987665
No 154
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.08 E-value=0.016 Score=51.89 Aligned_cols=28 Identities=21% Similarity=0.201 Sum_probs=21.9
Q ss_pred EEEEeCCCCCcHHHHHHHHhc-----CCCCCCc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR-----LYEPSDG 492 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r-----~y~p~~G 492 (680)
+++|||.+|+|||||++-+.+ -|.|+.|
T Consensus 5 KivlvG~~~vGKTsLi~r~~~~~f~~~~~~t~~ 37 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLG 37 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHHCCCCSSCCCCCS
T ss_pred EEEEECCCCcCHHHHHHHHHhCCCCcccccccc
Confidence 589999999999999997653 3455555
No 155
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.08 E-value=0.012 Score=53.31 Aligned_cols=21 Identities=38% Similarity=0.612 Sum_probs=18.4
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
++++||++|+|||||++-+.+
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999996644
No 156
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=94.02 E-value=0.0087 Score=56.59 Aligned_cols=26 Identities=38% Similarity=0.627 Sum_probs=20.7
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
-.++++|||+|+||||.+-=|+..+.
T Consensus 9 p~vi~lvGptGvGKTTTiAKLA~~~~ 34 (211)
T d2qy9a2 9 PFVILMVGVNGVGKTTTIGKLARQFE 34 (211)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 35799999999999987666676665
No 157
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=93.99 E-value=0.01 Score=56.47 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=23.8
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDG 492 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G 492 (680)
.+-+.||+|+||||++++|+.-+....+
T Consensus 37 ~~L~~GPpGtGKT~lA~~la~~~~~~~~ 64 (238)
T d1in4a2 37 HVLLAGPPGLGKTTLAHIIASELQTNIH 64 (238)
T ss_dssp CEEEESSTTSSHHHHHHHHHHHHTCCEE
T ss_pred eEEEECCCCCcHHHHHHHHHhccCCCcc
Confidence 3789999999999999999988775533
No 158
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=93.99 E-value=0.011 Score=59.08 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=27.7
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPL 501 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di 501 (680)
|+.-+.++||||||||+|++.|++.+. .--+.+|+-++
T Consensus 48 ~~~~iLl~GPpG~GKT~lAkalA~~~~--~~~~~i~~s~~ 85 (309)
T d1ofha_ 48 TPKNILMIGPTGVGKTEIARRLAKLAN--APFIKVEATKF 85 (309)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHHT--CCEEEEEGGGG
T ss_pred CCceEEEECCCCCCHHHHHHHHhhccc--cchhccccccc
Confidence 345567999999999999999999763 22455555433
No 159
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=93.96 E-value=0.013 Score=55.08 Aligned_cols=25 Identities=28% Similarity=0.497 Sum_probs=23.1
Q ss_pred eeCCcEEEEeCCCCCcHHHHHHHHh
Q 005740 460 IEANEVVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 460 I~~Ge~vAIVG~SGsGKSTL~~LL~ 484 (680)
+++|+.+-|.|++|+||||++.-++
T Consensus 31 l~~G~l~~i~G~~G~GKT~~~l~~a 55 (258)
T d2i1qa2 31 LESQSVTEFAGVFGSGKTQIMHQSC 55 (258)
T ss_dssp EETTEEEEEEESTTSSHHHHHHHHH
T ss_pred ccCCeEEEEEeCCCCCHHHHHHHHH
Confidence 8999999999999999999987665
No 160
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.94 E-value=0.013 Score=56.08 Aligned_cols=24 Identities=25% Similarity=0.362 Sum_probs=21.4
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
.+-|.||+|+||||++++|++-+.
T Consensus 54 ~lll~GPpG~GKTt~a~~la~~~~ 77 (253)
T d1sxja2 54 AAMLYGPPGIGKTTAAHLVAQELG 77 (253)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTT
T ss_pred eEEEECCCCCCHHHHHHHHHHHHH
Confidence 467999999999999999998764
No 161
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=93.88 E-value=0.015 Score=54.40 Aligned_cols=26 Identities=27% Similarity=0.524 Sum_probs=22.9
Q ss_pred eeCCcEEEEeCCCCCcHHHHH-HHHhc
Q 005740 460 IEANEVVAIVGLSGSGKSTFV-NLLLR 485 (680)
Q Consensus 460 I~~Ge~vAIVG~SGsGKSTL~-~LL~r 485 (680)
+++|+.+-|.|++|+||||++ +++..
T Consensus 23 i~~G~~~~I~G~~G~GKT~la~~~~~~ 49 (242)
T d1tf7a1 23 LPIGRSTLVSGTSGTGKTLFSIQFLYN 49 (242)
T ss_dssp EETTSEEEEEESTTSSHHHHHHHHHHH
T ss_pred CcCCeEEEEEeCCCCCHHHHHHHHHHH
Confidence 899999999999999999997 45543
No 162
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=93.82 E-value=0.013 Score=56.13 Aligned_cols=24 Identities=21% Similarity=0.504 Sum_probs=20.9
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhc
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r 485 (680)
.+..+.|+||+|+|||||++-+++
T Consensus 28 ~~~~i~i~G~~G~GKTsLl~~~~~ 51 (283)
T d2fnaa2 28 RAPITLVLGLRRTGKSSIIKIGIN 51 (283)
T ss_dssp CSSEEEEEESTTSSHHHHHHHHHH
T ss_pred cCCEEEEEcCCCCcHHHHHHHHHH
Confidence 467899999999999999987764
No 163
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=93.69 E-value=0.017 Score=55.25 Aligned_cols=30 Identities=23% Similarity=0.428 Sum_probs=25.2
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCCCCCCc
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLYEPSDG 492 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G 492 (680)
...+.|+||+|+||||+++.+++.+....+
T Consensus 43 ~~~lll~GppGtGKT~l~~~l~~~l~~~~~ 72 (276)
T d1fnna2 43 YPRATLLGRPGTGKTVTLRKLWELYKDKTT 72 (276)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHTTSCC
T ss_pred CCceEEECCCCCCHHHHHHHHHHHHhcccC
Confidence 357899999999999999999998864443
No 164
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.68 E-value=0.015 Score=52.38 Aligned_cols=21 Identities=29% Similarity=0.387 Sum_probs=18.5
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
++++||++|+|||||++-+.+
T Consensus 5 KivvvG~~~vGKTsli~r~~~ 25 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTD 25 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHhc
Confidence 489999999999999997663
No 165
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.65 E-value=0.014 Score=52.19 Aligned_cols=21 Identities=29% Similarity=0.502 Sum_probs=18.4
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
++++||.+|+|||||++-+..
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~ 24 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVE 24 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999997653
No 166
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.61 E-value=0.028 Score=51.03 Aligned_cols=21 Identities=29% Similarity=0.532 Sum_probs=18.4
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
+++++|.+|+|||||++-+.+
T Consensus 7 ki~vlG~~~vGKTsLi~~~~~ 27 (175)
T d2bmja1 7 RLGVLGDARSGKSSLIHRFLT 27 (175)
T ss_dssp EEEEECCTTTTHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 689999999999999995544
No 167
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=93.55 E-value=0.0097 Score=51.52 Aligned_cols=35 Identities=20% Similarity=0.121 Sum_probs=26.7
Q ss_pred HHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHh
Q 005740 584 ARAILRDPAILLLDEATSALDSESEHYVKGVLHALR 619 (680)
Q Consensus 584 ARAll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~ 619 (680)
.+..+++-+++|+||+= .+|+.+...+...++...
T Consensus 88 ~~~~~~~~~~vIiDE~H-~~~~~~~~~~~~~l~~~~ 122 (136)
T d1a1va1 88 GGCSGGAYDIIICDECH-STDATSILGIGTVLDQAE 122 (136)
T ss_dssp TGGGGCCCSEEEEETTT-CCSHHHHHHHHHHHHHTT
T ss_pred cchhhhcCCEEEEeccc-ccCHHHHHHHHHHHHHHH
Confidence 44566788999999996 469988887777776553
No 168
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=93.54 E-value=0.017 Score=53.45 Aligned_cols=24 Identities=38% Similarity=0.660 Sum_probs=21.0
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
.|+|-|.-||||||++++|...+.
T Consensus 2 lI~ieG~dGsGKST~~~~L~~~l~ 25 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSGAFR 25 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 488999999999999999987553
No 169
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.52 E-value=0.022 Score=52.06 Aligned_cols=28 Identities=32% Similarity=0.637 Sum_probs=23.8
Q ss_pred EEEEeCCCCCcHHHHHHHH--hcCCCCCCc
Q 005740 465 VVAIVGLSGSGKSTFVNLL--LRLYEPSDG 492 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL--~r~y~p~~G 492 (680)
++.|+|.+|+|||||++-+ ..-|.||-|
T Consensus 4 KivllG~~~vGKTsll~r~~f~~~~~pTiG 33 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQMRIIHGQDPTKG 33 (200)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHSCCCCSS
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCCeee
Confidence 6899999999999999977 334578988
No 170
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.51 E-value=0.026 Score=51.29 Aligned_cols=32 Identities=25% Similarity=0.460 Sum_probs=23.7
Q ss_pred EEEEeCCCCCcHHHHHHHHhc-----CCCCCCceEEE
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR-----LYEPSDGQIYI 496 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r-----~y~p~~G~I~i 496 (680)
++.++|.+|+|||||++-+.. -|.|+-|....
T Consensus 4 KivliG~~~vGKTsli~r~~~~~f~~~~~~t~~~~~~ 40 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYT 40 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEE
T ss_pred EEEEECCCCcCHHHHHHHHHhCCCCCccCCceeeccc
Confidence 689999999999999975543 35666664433
No 171
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=93.49 E-value=0.014 Score=57.11 Aligned_cols=53 Identities=28% Similarity=0.337 Sum_probs=40.2
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC--CCCCceEEECCeeCCCCCHHHhhccEEEEcc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY--EPSDGQIYIDGFPLTDLDIRWLREKIGFVGQ 518 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y--~p~~G~I~idG~di~~~~~~~LR~~I~~V~Q 518 (680)
.+||+|+.|||||||+..|+..- ....|+|. +|..+.++..++-.+.+++-+.
T Consensus 4 Nv~iiGh~~~GKTtL~e~ll~~~g~~~~~g~v~-~g~~~~D~~~~E~~r~~ti~~~ 58 (267)
T d2dy1a2 4 TVALVGHAGSGKTTLTEALLYKTGAKERRGRVE-EGTTTTDYTPEAKLHRTTVRTG 58 (267)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTTSSSSCCCGG-GTCCSSCCSHHHHHTTSCCSCE
T ss_pred EEEEEcCCCCcHHHHHHHHHHHcCCchhhccch-hccccccchHHHHHhCCeEEee
Confidence 48999999999999999885322 23456664 6778888999998888775443
No 172
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.49 E-value=0.018 Score=51.27 Aligned_cols=20 Identities=20% Similarity=0.346 Sum_probs=18.0
Q ss_pred EEEEeCCCCCcHHHHHHHHh
Q 005740 465 VVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~ 484 (680)
+|+++|.+|+|||||++-+.
T Consensus 4 Kv~liG~~~vGKTsLl~~~~ 23 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFC 23 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 48999999999999998665
No 173
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=93.47 E-value=0.0099 Score=56.29 Aligned_cols=26 Identities=31% Similarity=0.615 Sum_probs=19.2
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+..++++|||+|+||||.+-=|+..|
T Consensus 10 ~p~vi~lvGptGvGKTTTiAKLAa~~ 35 (213)
T d1vmaa2 10 PPFVIMVVGVNGTGKTTSCGKLAKMF 35 (213)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 34478999999999998655555444
No 174
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=93.47 E-value=0.016 Score=54.80 Aligned_cols=23 Identities=30% Similarity=0.322 Sum_probs=20.6
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
.+-|.||+|+||||+++.+++-.
T Consensus 47 ~lll~Gp~G~GKTtla~~iak~l 69 (231)
T d1iqpa2 47 HLLFAGPPGVGKTTAALALAREL 69 (231)
T ss_dssp EEEEESCTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCcHHHHHHHHHHHH
Confidence 37899999999999999998855
No 175
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.40 E-value=0.016 Score=54.66 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=20.1
Q ss_pred EEEeCCCCCcHHHHHHHHhcCC
Q 005740 466 VAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+-|.||+|+||||+++.+++-+
T Consensus 36 lll~Gp~G~GKTtl~~~i~~~l 57 (237)
T d1sxjd2 36 MLFYGPPGTGKTSTILALTKEL 57 (237)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCChHHHHHHHHHHH
Confidence 7899999999999999999853
No 176
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.36 E-value=0.036 Score=49.52 Aligned_cols=20 Identities=30% Similarity=0.464 Sum_probs=18.4
Q ss_pred EEEEeCCCCCcHHHHHHHHh
Q 005740 465 VVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~ 484 (680)
++++||.+|+|||||++-+.
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~ 27 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFV 27 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 68999999999999998877
No 177
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.33 E-value=0.019 Score=56.75 Aligned_cols=22 Identities=27% Similarity=0.268 Sum_probs=18.8
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
.|||-|++|||||||.+.|...
T Consensus 29 iIGi~G~qGSGKSTl~~~l~~~ 50 (286)
T d1odfa_ 29 FIFFSGPQGSGKSFTSIQIYNH 50 (286)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEeECCCCCCHHHHHHHHHHH
Confidence 5899999999999999876543
No 178
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=93.30 E-value=0.017 Score=60.71 Aligned_cols=45 Identities=27% Similarity=0.550 Sum_probs=33.6
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEEEEccCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIGFVGQEP 520 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~ 520 (680)
-+-++||||||||-|++-|+++.+.. -+..|+..+.+ .|||..|.
T Consensus 51 NILliGPTGvGKTlLAr~LAk~l~VP--Fv~~daT~fTe---------aGYvG~DV 95 (443)
T d1g41a_ 51 NILMIGPTGVGKTEIARRLAKLANAP--FIKVEATKFTE---------VGYVGKEV 95 (443)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHTTCC--EEEEEGGGGC-------------CCCCT
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCC--EEEeecceeee---------cceeecch
Confidence 47899999999999999999988655 56677765554 77887776
No 179
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.28 E-value=0.019 Score=52.20 Aligned_cols=20 Identities=20% Similarity=0.265 Sum_probs=18.0
Q ss_pred EEEEeCCCCCcHHHHHHHHh
Q 005740 465 VVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~ 484 (680)
++++||.+|+|||||++-+.
T Consensus 7 KivviG~~~vGKTsli~~~~ 26 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYT 26 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 69999999999999997654
No 180
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=93.26 E-value=0.018 Score=59.82 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=26.4
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCce
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQ 493 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~ 493 (680)
.++-.+-+.||+||||||.+..+++..+.+..+
T Consensus 156 ~~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~ 188 (401)
T d1p9ra_ 156 RPHGIILVTGPTGSGKSTTLYAGLQELNSSERN 188 (401)
T ss_dssp SSSEEEEEECSTTSCHHHHHHHHHHHHCCTTSC
T ss_pred hhhceEEEEcCCCCCccHHHHHHhhhhcCCCce
Confidence 467789999999999999999998866433333
No 181
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=93.25 E-value=0.019 Score=54.65 Aligned_cols=22 Identities=23% Similarity=0.540 Sum_probs=19.9
Q ss_pred cEEEEeCCCCCcHHHHHHHHhc
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r 485 (680)
..+||.|+-||||||+++.|..
T Consensus 2 ~iIgiTG~igSGKsTva~~l~e 23 (241)
T d1deka_ 2 KLIFLSGVKRSGKDTTADFIMS 23 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH
Confidence 4799999999999999999954
No 182
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=93.23 E-value=0.011 Score=55.79 Aligned_cols=27 Identities=33% Similarity=0.567 Sum_probs=17.1
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
...++++|||+|+||||.+-=|+..|.
T Consensus 11 ~p~vi~lvGptGvGKTTTiAKLA~~~~ 37 (211)
T d1j8yf2 11 IPYVIMLVGVQGTGKATTAGKLAYFYK 37 (211)
T ss_dssp SSEEEEEECSCCC----HHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 446799999999999987666665553
No 183
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.22 E-value=0.02 Score=51.10 Aligned_cols=21 Identities=29% Similarity=0.419 Sum_probs=18.2
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
+++|||.+|+|||||++-+.+
T Consensus 6 KivlvG~~~vGKTsli~~~~~ 26 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTE 26 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999976653
No 184
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=93.20 E-value=0.015 Score=56.75 Aligned_cols=54 Identities=24% Similarity=0.342 Sum_probs=38.3
Q ss_pred EeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCc-eEEECCeeCCCCCHHHhhccEEE
Q 005740 459 TIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDG-QIYIDGFPLTDLDIRWLREKIGF 515 (680)
Q Consensus 459 ~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G-~I~idG~di~~~~~~~LR~~I~~ 515 (680)
=|++|..+-|.||+||||||++--++.-..-..| -+++|... .++.+.+ +.+|+
T Consensus 50 Gi~~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~--~~~~~~a-~~~Gv 104 (263)
T d1u94a1 50 GLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEH--ALDPIYA-RKLGV 104 (263)
T ss_dssp SEETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSC--CCCHHHH-HHTTC
T ss_pred CccCceEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEcccc--ccCHHHH-HHhCC
Confidence 4899999999999999999998777766654444 47777754 3444433 33453
No 185
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=93.20 E-value=0.013 Score=53.31 Aligned_cols=21 Identities=38% Similarity=0.589 Sum_probs=18.4
Q ss_pred cEEEEeCCCCCcHHHHHHHHh
Q 005740 464 EVVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~ 484 (680)
=++++||++|+|||||++-+.
T Consensus 18 ~KI~lvG~~~vGKTsLi~~l~ 38 (182)
T d1moza_ 18 LRILILGLDGAGKTTILYRLQ 38 (182)
T ss_dssp EEEEEEEETTSSHHHHHHHTC
T ss_pred EEEEEECCCCCCHHHHHHHHh
Confidence 368999999999999998764
No 186
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.16 E-value=0.029 Score=50.20 Aligned_cols=20 Identities=35% Similarity=0.463 Sum_probs=17.7
Q ss_pred EEEEeCCCCCcHHHHHHHHh
Q 005740 465 VVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~ 484 (680)
++++||++|+|||||++-+.
T Consensus 8 Ki~vvG~~~vGKTsli~~~~ 27 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFK 27 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 49999999999999999553
No 187
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=93.05 E-value=0.02 Score=54.37 Aligned_cols=23 Identities=22% Similarity=0.439 Sum_probs=20.2
Q ss_pred EEEeCCCCCcHHHHHHHHhcCCC
Q 005740 466 VAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
+-+.||+|+||||+++++++-+.
T Consensus 38 ~Ll~GPpG~GKTtla~~la~~~~ 60 (239)
T d1ixsb2 38 LLLFGPPGLGKTTLAHVIAHELG 60 (239)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 56999999999999999998543
No 188
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.01 E-value=0.02 Score=51.57 Aligned_cols=21 Identities=29% Similarity=0.499 Sum_probs=18.6
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
+|+|||.+|+|||||++-+..
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~ 28 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQ 28 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 699999999999999987654
No 189
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.01 E-value=0.015 Score=52.47 Aligned_cols=20 Identities=25% Similarity=0.376 Sum_probs=9.3
Q ss_pred EEEEeCCCCCcHHHHHHHHh
Q 005740 465 VVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~ 484 (680)
+|++||.+|+|||||++-++
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~ 27 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRFS 27 (173)
T ss_dssp EEEEECCCCC----------
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 49999999999999997554
No 190
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.97 E-value=0.02 Score=51.67 Aligned_cols=22 Identities=23% Similarity=0.359 Sum_probs=19.0
Q ss_pred cEEEEeCCCCCcHHHHHHHHhc
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r 485 (680)
.++.+||.+|+|||||++-+..
T Consensus 3 ~KivvvG~~~vGKTsLi~~~~~ 24 (177)
T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSK 24 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3689999999999999977664
No 191
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=92.88 E-value=0.032 Score=50.67 Aligned_cols=31 Identities=35% Similarity=0.232 Sum_probs=22.8
Q ss_pred ccceeEEeeCCcEEEEeCCCCCcHHHHHHHHh
Q 005740 453 LNHVCLTIEANEVVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 453 L~~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~ 484 (680)
|+.--+ --.|.-|.|.|+||+||||++-.|.
T Consensus 6 ~H~~~v-~~~g~gvli~G~sg~GKS~la~~l~ 36 (169)
T d1ko7a2 6 LHGVLV-DVYGVGVLITGDSGIGKSETALELI 36 (169)
T ss_dssp EESEEE-EETTEEEEEEESTTSSHHHHHHHHH
T ss_pred EEEEEE-EECCEEEEEEeCCCCCHHHHHHHHH
Confidence 444333 3458899999999999999884443
No 192
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.81 E-value=0.022 Score=51.19 Aligned_cols=20 Identities=25% Similarity=0.599 Sum_probs=18.1
Q ss_pred EEEEeCCCCCcHHHHHHHHh
Q 005740 465 VVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~ 484 (680)
++++||.+|+|||||++-+.
T Consensus 7 KI~lvG~~~vGKTsll~~~~ 26 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFI 26 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 39999999999999999765
No 193
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=92.80 E-value=0.027 Score=50.56 Aligned_cols=31 Identities=26% Similarity=0.259 Sum_probs=27.5
Q ss_pred EeeCCcEEEEeCCCCCcHHHHHHHHhcCCCC
Q 005740 459 TIEANEVVAIVGLSGSGKSTFVNLLLRLYEP 489 (680)
Q Consensus 459 ~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p 489 (680)
..+||..+++.|+=||||||++|-+++-+-.
T Consensus 29 ~~~~g~ii~L~G~LGaGKTtfvr~~~~~lg~ 59 (158)
T d1htwa_ 29 HTEKAIMVYLNGDLGAGKTTLTRGMLQGIGH 59 (158)
T ss_dssp CCSSCEEEEEECSTTSSHHHHHHHHHHHTTC
T ss_pred cCCCCeEEEEecCCCccHHHHHHHHHhhccc
Confidence 3578999999999999999999999988754
No 194
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.71 E-value=0.026 Score=50.94 Aligned_cols=21 Identities=33% Similarity=0.499 Sum_probs=18.8
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
+++++|.+|+|||||++-+.+
T Consensus 9 Ki~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 9 KILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999997764
No 195
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=92.69 E-value=0.021 Score=56.39 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=28.7
Q ss_pred eeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 456 VCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 456 isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
.=+.|-+|++.+|+|++|+|||||+.-+.+--.
T Consensus 36 ~l~PigrGQr~~I~g~~g~GKT~l~~~i~~~~~ 68 (289)
T d1xpua3 36 LASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIA 68 (289)
T ss_dssp HHSCCBTTCEEEEEECSSSSHHHHHHHHHHHHH
T ss_pred ecccccCCCeeeEeCCCCCCHHHHHHHHHHHHh
Confidence 346788999999999999999999999988553
No 196
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.56 E-value=0.023 Score=51.07 Aligned_cols=19 Identities=42% Similarity=0.674 Sum_probs=17.0
Q ss_pred EEEEeCCCCCcHHHHHHHH
Q 005740 465 VVAIVGLSGSGKSTFVNLL 483 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL 483 (680)
++++||.+|+|||||++-+
T Consensus 5 Ki~vvG~~~vGKTsli~~~ 23 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRH 23 (170)
T ss_dssp EEEEEECTTSSHHHHHHTT
T ss_pred EEEEECCCCcCHHHHHHHH
Confidence 6999999999999998754
No 197
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=92.42 E-value=0.026 Score=51.12 Aligned_cols=30 Identities=30% Similarity=0.443 Sum_probs=26.0
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCceE
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDGQI 494 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I 494 (680)
++.+||.+|+|||||++=+..-.-|+.|-.
T Consensus 4 KivllG~~~vGKTsl~~r~~~~~~~t~~~~ 33 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKIIHEAGTGIV 33 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHSCCCSEE
T ss_pred EEEEECCCCCCHHHHHHHHhhCCCCCccEE
Confidence 689999999999999998877777888844
No 198
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=92.40 E-value=0.029 Score=53.16 Aligned_cols=22 Identities=23% Similarity=0.478 Sum_probs=19.9
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
+|||+|..+||||||++-|.+-
T Consensus 7 ~IaIiGh~d~GKSTL~~~L~~~ 28 (227)
T d1g7sa4 7 IVSVLGHVDHGKTTLLDHIRGS 28 (227)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEEeCCCccHHHHHHHHHhh
Confidence 3999999999999999999863
No 199
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.35 E-value=0.028 Score=52.84 Aligned_cols=22 Identities=36% Similarity=0.502 Sum_probs=19.5
Q ss_pred EEEeCCCCCcHHHHHHHHhcCC
Q 005740 466 VAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+-+.||+|+||||+++++++-.
T Consensus 39 ~ll~Gp~G~GKTt~a~~la~~l 60 (224)
T d1sxjb2 39 MIISGMPGIGKTTSVHCLAHEL 60 (224)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCchhhHHHHHHHH
Confidence 6789999999999999998643
No 200
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=92.32 E-value=0.023 Score=55.61 Aligned_cols=74 Identities=22% Similarity=0.326 Sum_probs=51.5
Q ss_pred EeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCce-EEECCeeCCCCCHHHhhccEEEEccCCcCccccHHHHHhcCCCC
Q 005740 459 TIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQ-IYIDGFPLTDLDIRWLREKIGFVGQEPQLLQMDIKSNIMYGCPK 537 (680)
Q Consensus 459 ~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~-I~idG~di~~~~~~~LR~~I~~V~Qd~~LF~gTI~eNI~~g~~~ 537 (680)
=++.|..+-|.||+||||||++--++.-+.-..|. |+||... .++.+.+++ +|+ | -||+.+- .+
T Consensus 56 G~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~--~~~~e~a~~-~Gv---D--------~d~il~~-~~ 120 (269)
T d1mo6a1 56 GLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEH--ALDPDYAKK-LGV---D--------TDSLLVS-QP 120 (269)
T ss_dssp SBCSSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSC--CCCHHHHHH-HTC---C--------GGGCEEE-CC
T ss_pred CcccceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCc--cCCHHHHHH-hCC---C--------HHHeEEe-cC
Confidence 48899999999999999999987777766666666 6777654 366666554 453 2 1466666 33
Q ss_pred CCCHHHHHHHH
Q 005740 538 DVKNEDIEWAA 548 (680)
Q Consensus 538 ~~s~eei~~A~ 548 (680)
+ +-||+.+.+
T Consensus 121 ~-~~E~~~~~~ 130 (269)
T d1mo6a1 121 D-TGEQALEIA 130 (269)
T ss_dssp S-SHHHHHHHH
T ss_pred C-CHHHHHHHH
Confidence 3 556665544
No 201
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=92.24 E-value=0.028 Score=54.17 Aligned_cols=23 Identities=22% Similarity=0.241 Sum_probs=20.5
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
..+-+.||+|||||++++.|++-
T Consensus 41 ~~vLL~GppGtGKT~la~alA~~ 63 (246)
T d1d2na_ 41 VSVLLEGPPHSGKTALAAKIAEE 63 (246)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred eEEEEECcCCCCHHHHHHHHhhc
Confidence 46889999999999999999863
No 202
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=92.21 E-value=0.031 Score=56.16 Aligned_cols=25 Identities=40% Similarity=0.496 Sum_probs=22.1
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
.-+++|+|+.|+|||||+.-|.+.+
T Consensus 51 ~~~igitG~pGaGKSTli~~l~~~~ 75 (323)
T d2qm8a1 51 AIRVGITGVPGVGKSTTIDALGSLL 75 (323)
T ss_dssp SEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred ceEEeeeCCCCCCHHHHHHHHHHHH
Confidence 4579999999999999999998754
No 203
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=92.11 E-value=0.02 Score=51.44 Aligned_cols=24 Identities=25% Similarity=0.332 Sum_probs=20.3
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
++.++|++|+|||||++-+..-..
T Consensus 14 kIvlvG~~~vGKTSli~rl~~~~~ 37 (173)
T d1e0sa_ 14 RILMLGLDAAGKTTILYKLKLGQS 37 (173)
T ss_dssp EEEEEEETTSSHHHHHHHTTCCCC
T ss_pred EEEEECCCCCCHHHHHHHHhcCCC
Confidence 689999999999999998865443
No 204
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.09 E-value=0.033 Score=50.76 Aligned_cols=20 Identities=20% Similarity=0.277 Sum_probs=17.9
Q ss_pred EEEEeCCCCCcHHHHHHHHh
Q 005740 465 VVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~ 484 (680)
+++|||.+|+|||||++-+.
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~ 30 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYA 30 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 59999999999999997655
No 205
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.07 E-value=0.036 Score=49.44 Aligned_cols=20 Identities=25% Similarity=0.504 Sum_probs=18.1
Q ss_pred EEEEeCCCCCcHHHHHHHHh
Q 005740 465 VVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~ 484 (680)
++++||.+|+|||||++-+.
T Consensus 5 KivvvG~~~vGKTsli~r~~ 24 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFV 24 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 58999999999999999765
No 206
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.87 E-value=0.051 Score=49.59 Aligned_cols=29 Identities=21% Similarity=0.252 Sum_probs=21.7
Q ss_pred EEEEeCCCCCcHHHHHHHHh-cC----CCCCCce
Q 005740 465 VVAIVGLSGSGKSTFVNLLL-RL----YEPSDGQ 493 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~-r~----y~p~~G~ 493 (680)
+|+++|.+|+|||||++-+. +- |.|+-|.
T Consensus 5 KvvllG~~~vGKTSli~r~~~~~f~~~~~~t~~~ 38 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFD 38 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEE
T ss_pred EEEEECCCCcCHHHHHHHHHhCCCCCCcCCceee
Confidence 59999999999999986553 33 4565553
No 207
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=91.86 E-value=0.034 Score=54.53 Aligned_cols=49 Identities=18% Similarity=0.190 Sum_probs=23.2
Q ss_pred EEEEeCCCCCcHHHHHHHHh---cCCCCCCceEEECCeeCCCCCHHHhhccEEE
Q 005740 465 VVAIVGLSGSGKSTFVNLLL---RLYEPSDGQIYIDGFPLTDLDIRWLREKIGF 515 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~---r~y~p~~G~I~idG~di~~~~~~~LR~~I~~ 515 (680)
.+||+|+.|||||||+..|+ |..+ ..|++. +|..+.++..++..+.+++
T Consensus 8 ni~i~gh~~~GKTtL~e~ll~~~g~~~-~~g~v~-~~~~~~D~~~~E~~r~~si 59 (276)
T d2bv3a2 8 NIGIAAHIDAGKTTTTERILYYTGRIH-KIGEVH-EGAATMDFMEQERERGITI 59 (276)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHTSSC-C--------------------CCCCC
T ss_pred EEEEEeCCCCCHHHHHHHHHHhcCccc-ccccee-cCceEEeccHHHHhcCCcc
Confidence 48999999999999999884 3333 345553 5556667777777666654
No 208
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=91.70 E-value=0.031 Score=54.72 Aligned_cols=33 Identities=39% Similarity=0.589 Sum_probs=26.8
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC-----------CCCCCceEEEC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL-----------YEPSDGQIYID 497 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~-----------y~p~~G~I~id 497 (680)
++||||-.-+|||||++.|.+- .+|.-|.|.+.
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~~~~~~~ypf~ti~pn~gvv~v~ 47 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMP 47 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHTC------CCCCCCCCSSEEECC
T ss_pred eEEEECCCCCCHHHHHHHHHCCCCccccCCCCCCCCceEEEecc
Confidence 7999999999999999999943 25666776654
No 209
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=91.26 E-value=0.041 Score=54.05 Aligned_cols=23 Identities=26% Similarity=0.371 Sum_probs=21.2
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
.+++||...||||||++.|+|.=
T Consensus 28 ~ivvvG~~SsGKSsliNaLlg~~ 50 (299)
T d2akab1 28 QIAVVGGQSAGKSSVLENFVGRD 50 (299)
T ss_dssp EEEEEEBTTSCHHHHHHHHHTSC
T ss_pred eEEEEcCCCCCHHHHHHHHhCCC
Confidence 49999999999999999999954
No 210
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.22 E-value=0.051 Score=52.52 Aligned_cols=24 Identities=17% Similarity=0.278 Sum_probs=21.3
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
.-+-+.||+|||||++++.+++..
T Consensus 39 ~giLL~GppGtGKT~l~~ala~~~ 62 (258)
T d1e32a2 39 RGILLYGPPGTGKTLIARAVANET 62 (258)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHT
T ss_pred ceeEEecCCCCCchHHHHHHHHHh
Confidence 348899999999999999999965
No 211
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=91.12 E-value=0.052 Score=51.04 Aligned_cols=39 Identities=23% Similarity=0.332 Sum_probs=28.0
Q ss_pred cEEEEeCCCCCcHHHHHHHH-hcCCCCCCce----EEECCeeCC
Q 005740 464 EVVAIVGLSGSGKSTFVNLL-LRLYEPSDGQ----IYIDGFPLT 502 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL-~r~y~p~~G~----I~idG~di~ 502 (680)
-++.++|.+|+|||||++-+ .+-+.|+-|- +.++++.+.
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~~~~pTiG~~~~~~~~~~~~~~ 50 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRILHVVLTSGIFETKFQVDKVNFH 50 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHCCCCCSCEEEEEEETTEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHhcCCcCCCCCeEEEEEEECcEEEE
Confidence 47899999999999998865 4555688773 334555443
No 212
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.10 E-value=0.042 Score=53.96 Aligned_cols=24 Identities=50% Similarity=0.513 Sum_probs=21.9
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
..|+|+||.++|||||++.|.+-.
T Consensus 33 ~vvsi~G~~~sGKS~llN~l~~~~ 56 (277)
T d1f5na2 33 VVVAIVGLYRTGKSYLMNKLAGKK 56 (277)
T ss_dssp EEEEEEEBTTSSHHHHHHHHTTCS
T ss_pred EEEEEECCCCCCHHHHHHHHcCCC
Confidence 479999999999999999999855
No 213
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=90.91 E-value=0.049 Score=54.17 Aligned_cols=22 Identities=32% Similarity=0.469 Sum_probs=20.0
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
+|||||..-+|||||++.|.|-
T Consensus 2 ~v~lvG~pn~GKStlfn~lt~~ 23 (319)
T d1wxqa1 2 EIGVVGKPNVGKSTFFSAATLV 23 (319)
T ss_dssp EEEEEECTTSSHHHHHHHHHC-
T ss_pred cEeEECCCCCCHHHHHHHHHCC
Confidence 5999999999999999999874
No 214
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.87 E-value=0.049 Score=51.44 Aligned_cols=25 Identities=44% Similarity=0.611 Sum_probs=22.4
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
+.++|=|.-||||||++++|...+.
T Consensus 3 k~IviEG~~GsGKST~~~~L~~~l~ 27 (241)
T d2ocpa1 3 RRLSIEGNIAVGKSTFVKLLTKTYP 27 (241)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHCT
T ss_pred eEEEEECCCCCcHHHHHHHHHHHHh
Confidence 4789999999999999999997664
No 215
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=90.79 E-value=0.043 Score=54.80 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=26.7
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCe
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGF 499 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~ 499 (680)
...+.++||||+|||.|++.|++.+. .--|.+|..
T Consensus 52 ~~~~lf~Gp~GvGKT~lak~la~~l~--~~~i~~d~s 86 (315)
T d1r6bx3 52 VGSFLFAGPTGVGKTEVTVQLSKALG--IELLRFDMS 86 (315)
T ss_dssp SEEEEEECSTTSSHHHHHHHHHHHHT--CEEEEEEGG
T ss_pred ceEEEEECCCcchhHHHHHHHHhhcc--CCeeEeccc
Confidence 34578999999999999999999874 224555443
No 216
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=90.66 E-value=0.054 Score=53.45 Aligned_cols=52 Identities=19% Similarity=0.251 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHccCCC--eEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEec
Q 005740 577 QKQRIAIARAILRDPA--ILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIAH 633 (680)
Q Consensus 577 QrQRIaIARAll~~p~--ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIaH 633 (680)
+.+--++++..++++. ||....++..........+.+.++. ...||++++++
T Consensus 154 ~~~~~~~~~~yi~~~~~~il~v~~~~~~~~~~~~~~~~~~~~~-----~~~r~i~Vitk 207 (306)
T d1jwyb_ 154 EQQIRRMVMAYIKKQNAIIVAVTPANTDLANSDALQLAKEVDP-----EGKRTIGVITK 207 (306)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEEEESSSCSTTCSHHHHHHHHCS-----SCSSEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCceeEEeecccccccccHHHHHHHHhCc-----CCCeEEEEEec
Confidence 4456688888898886 6667777777666655555433322 23588888886
No 217
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=90.66 E-value=0.045 Score=52.33 Aligned_cols=23 Identities=22% Similarity=0.444 Sum_probs=20.2
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
.+.++||+|+||||+++.+++-+
T Consensus 48 ~l~l~GppGtGKT~l~~~l~~~l 70 (287)
T d1w5sa2 48 IYGSIGRVGIGKTTLAKFTVKRV 70 (287)
T ss_dssp EEECTTCCSSSHHHHHHHHHHHH
T ss_pred EEEeECCCCCCHHHHHHHHHHHH
Confidence 36678999999999999999875
No 218
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=89.97 E-value=0.083 Score=48.43 Aligned_cols=22 Identities=27% Similarity=0.548 Sum_probs=20.4
Q ss_pred EEEeCCCCCcHHHHHHHHhcCC
Q 005740 466 VAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+||+|.-.+|||||++.|.|.+
T Consensus 8 IaiiGhvd~GKSTL~~~L~g~~ 29 (195)
T d1kk1a3 8 IGMVGHVDHGKTTLTKALTGVW 29 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHTCC
T ss_pred EEEEeccCCcHHHHHHHHHhhh
Confidence 8999999999999999998754
No 219
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=89.91 E-value=0.07 Score=52.14 Aligned_cols=32 Identities=16% Similarity=0.286 Sum_probs=27.0
Q ss_pred ceeEEeeCCcEEEEeCCCCCcHHHHHHHHhcC
Q 005740 455 HVCLTIEANEVVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 455 ~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
|.=+.+-+|++++|.|++|+|||||+.-+.+-
T Consensus 60 D~l~pigkGQr~~If~~~g~GKt~l~~~i~~~ 91 (276)
T d2jdid3 60 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINN 91 (276)
T ss_dssp HHHSCEETTCEEEEEECTTSSHHHHHHHHHHH
T ss_pred eeeccccCCCEEEeeCCCCCCHHHHHHHHHHH
Confidence 33467899999999999999999997777654
No 220
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=89.88 E-value=0.059 Score=54.88 Aligned_cols=40 Identities=25% Similarity=0.232 Sum_probs=31.9
Q ss_pred EeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEE-ECCeeC
Q 005740 459 TIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIY-IDGFPL 501 (680)
Q Consensus 459 ~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~-idG~di 501 (680)
.++++..+.++||.|+||||+++.|+++.. |.+. +|+-+.
T Consensus 150 ~~~~~~~~~~~g~~~~gk~~~~~~~~~~~~---~~~i~in~s~~ 190 (362)
T d1svma_ 150 NIPKKRYWLFKGPIDSGKTTLAAALLELCG---GKALNVNLPLD 190 (362)
T ss_dssp CCTTCCEEEEECSTTSSHHHHHHHHHHHHC---CEEECCSSCTT
T ss_pred CCCCcCeEEEECCCCCCHHHHHHHHHHHcC---CCEEEEECcch
Confidence 347788999999999999999999999986 4443 555443
No 221
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=89.82 E-value=0.048 Score=56.31 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=25.6
Q ss_pred cEEEEeCCCCCcHHHHHH-HHhcCCCCCCceEEECC
Q 005740 464 EVVAIVGLSGSGKSTFVN-LLLRLYEPSDGQIYIDG 498 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~-LL~r~y~p~~G~I~idG 498 (680)
..+.|+|+||||||++++ ++...+.-..+-|.+|.
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~ 86 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDP 86 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 469999999999999885 55555554555555654
No 222
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=89.78 E-value=0.065 Score=52.85 Aligned_cols=33 Identities=27% Similarity=0.562 Sum_probs=27.5
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC------------CCCCceEEEC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY------------EPSDGQIYID 497 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y------------~p~~G~I~id 497 (680)
++||||...+|||||++.|.+-- +|.-|.+.+.
T Consensus 12 kiGivG~Pn~GKSTlfnalT~~~~~~~anypftTi~pn~g~v~v~ 56 (296)
T d1ni3a1 12 KTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPEEAKVAVP 56 (296)
T ss_dssp EEEEEECSSSSHHHHHHHHHHSTTTSTTCCSSCCCCTTEEEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCcCCCCccCccCCeEEEecc
Confidence 59999999999999999998752 5667877654
No 223
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=89.63 E-value=0.078 Score=51.71 Aligned_cols=23 Identities=30% Similarity=0.388 Sum_probs=20.6
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhc
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r 485 (680)
...++|+|..|.|||||++-+.+
T Consensus 44 ~~~v~I~GmgGiGKTtLA~~v~~ 66 (277)
T d2a5yb3 44 SFFLFLHGRAGSGKSVIASQALS 66 (277)
T ss_dssp SEEEEEECSTTSSHHHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHH
Confidence 46899999999999999998865
No 224
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=89.09 E-value=0.038 Score=46.89 Aligned_cols=21 Identities=14% Similarity=0.177 Sum_probs=18.3
Q ss_pred eeCCcEEEEeCCCCCcHHHHH
Q 005740 460 IEANEVVAIVGLSGSGKSTFV 480 (680)
Q Consensus 460 I~~Ge~vAIVG~SGsGKSTL~ 480 (680)
+++|+.+-|++|+|||||+.+
T Consensus 4 l~~~~~~il~~~tGsGKT~~~ 24 (140)
T d1yksa1 4 LKKGMTTVLDFHPGAGKTRRF 24 (140)
T ss_dssp TSTTCEEEECCCTTSSTTTTH
T ss_pred HHcCCcEEEEcCCCCChhHHH
Confidence 467999999999999999655
No 225
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=89.05 E-value=0.087 Score=48.99 Aligned_cols=21 Identities=29% Similarity=0.366 Sum_probs=18.9
Q ss_pred EEEEeCCCCCcHHHHHHHHhc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r 485 (680)
-+||+|..++|||||+.-|+.
T Consensus 5 ni~iiGhvd~GKSTL~~~Ll~ 25 (204)
T d2c78a3 5 NVGTIGHVDHGKTTLTAALTY 25 (204)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 389999999999999999864
No 226
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=88.59 E-value=0.14 Score=51.34 Aligned_cols=32 Identities=22% Similarity=0.300 Sum_probs=26.5
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCceEEE
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYI 496 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~i 496 (680)
+|.|=|+-||||||+++.|..-+....+.+.+
T Consensus 8 rI~iEG~iGsGKSTl~~~L~~~l~~~~~v~~~ 39 (333)
T d1p6xa_ 8 RIYLDGVYGIGKSTTGRVMASAASGGSPTLYF 39 (333)
T ss_dssp EEEEECSTTSSHHHHHHHHHSGGGCSSCEEEE
T ss_pred EEEEECCccCCHHHHHHHHHHHhccCCCeEEE
Confidence 57888999999999999999988765554444
No 227
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=88.51 E-value=0.1 Score=52.00 Aligned_cols=38 Identities=21% Similarity=0.308 Sum_probs=28.8
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCC-CCCCceEEECCeeC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLY-EPSDGQIYIDGFPL 501 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y-~p~~G~I~idG~di 501 (680)
-.+.++||||+|||.+++.|...+ .....-+.+|....
T Consensus 54 ~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~ 92 (315)
T d1qvra3 54 GSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEY 92 (315)
T ss_dssp EEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTC
T ss_pred eEEEEECCCcchHHHHHHHHHHHhcCCCcceEEEecccc
Confidence 357899999999999999999965 44455666765443
No 228
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=87.94 E-value=0.1 Score=50.98 Aligned_cols=43 Identities=9% Similarity=0.049 Sum_probs=32.4
Q ss_pred eeEEeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECC
Q 005740 456 VCLTIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDG 498 (680)
Q Consensus 456 isl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG 498 (680)
.=+.|-+|++++|+|++|+|||+|+..+..-..-+...+-+-+
T Consensus 60 ~l~pig~GQr~~Ifg~~g~GKt~l~~~~~~~~~~~~~v~V~~~ 102 (276)
T d1fx0a3 60 AMIPVGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVA 102 (276)
T ss_dssp TTSCCBTTCBCBEEESSSSSHHHHHHHHHHTCCTTTCEEEEEE
T ss_pred ccccccCCceEeeccCCCCChHHHHHHHHhhhcccCceeeeee
Confidence 3467889999999999999999999876666554554443433
No 229
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=87.89 E-value=0.14 Score=49.63 Aligned_cols=58 Identities=12% Similarity=0.157 Sum_probs=42.4
Q ss_pred eeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEEEEccCCc
Q 005740 460 IEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIGFVGQEPQ 521 (680)
Q Consensus 460 I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~~ 521 (680)
.++-.++.+.||.++||||++++|+.++ +.-|.+ ++ .-++..+..+..+--++.+|+.
T Consensus 101 ~~k~n~~~l~G~~~tGKS~f~~~i~~~l-g~~~~~--~~-~~~~f~l~~l~~k~~~~~~e~~ 158 (267)
T d1u0ja_ 101 FGKRNTIWLFGPATTGKTNIAEAIAHTV-PFYGCV--NW-TNENFPFNDCVDKMVIWWEEGK 158 (267)
T ss_dssp STTCCEEEEECSTTSSHHHHHHHHHHHS-SCEEEC--CT-TCSSCTTGGGSSCSEEEECSCC
T ss_pred CCccEEEEEEcCCCCCHHHHHHHHHHHh-cchhhc--cc-cCCCccccccCCCEEEEEeCCC
Confidence 4566789999999999999999999999 665543 33 2245667777666555666653
No 230
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=87.60 E-value=0.14 Score=52.12 Aligned_cols=35 Identities=26% Similarity=0.374 Sum_probs=26.7
Q ss_pred EEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCC
Q 005740 466 VAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLT 502 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~ 502 (680)
+-.+||||+|||-|++.|+++++ ..-|.+|-....
T Consensus 71 iLfiGPTGvGKTElAk~LA~~~~--~~~ir~D~s~~~ 105 (364)
T d1um8a_ 71 ILLIGPTGSGKTLMAQTLAKHLD--IPIAISDATSLT 105 (364)
T ss_dssp EEEECCTTSSHHHHHHHHHHHTT--CCEEEEEGGGCC
T ss_pred eeeeCCCCccHHHHHHHHHhhcc--cceeehhhhhcc
Confidence 66789999999999999999873 335666554443
No 231
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.32 E-value=0.13 Score=46.44 Aligned_cols=28 Identities=32% Similarity=0.539 Sum_probs=22.4
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC---CCCCCc
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL---YEPSDG 492 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~---y~p~~G 492 (680)
++.++|.+|+|||||++-+..- |.||-|
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~~~~~~pTiG 34 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRIIHGSGVPTTG 34 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTSSCCCCCS
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCceee
Confidence 6899999999999999877543 456666
No 232
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=87.13 E-value=0.067 Score=53.45 Aligned_cols=40 Identities=30% Similarity=0.377 Sum_probs=29.6
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLD 505 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~ 505 (680)
|.-+-|+|+.|+|||||++.+.++.+|- -.+.+.++....
T Consensus 28 ~h~vLl~G~pG~GKT~lar~~~~iLp~~---~~~~~~~~~~~~ 67 (333)
T d1g8pa_ 28 IGGVLVFGDRGTGKSTAVRALAALLPEI---EAVEGCPVSSPN 67 (333)
T ss_dssp GCCEEEECCGGGCTTHHHHHHHHHSCCE---EEETTCTTCCSS
T ss_pred CCeEEEECCCCccHHHHHHHHHHhCCCc---hhhccCccccCc
Confidence 4568999999999999999999999762 234444444433
No 233
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.30 E-value=0.2 Score=42.48 Aligned_cols=39 Identities=5% Similarity=-0.023 Sum_probs=28.6
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHH-hcCCCCCCc-eEE-ECCe
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLL-LRLYEPSDG-QIY-IDGF 499 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL-~r~y~p~~G-~I~-idG~ 499 (680)
+.|=++-+.|-||||||||++.| ..|.+-..| .|. +||.
T Consensus 4 kqgf~i~~tg~~~~gk~~ia~al~~~l~q~~G~R~vtll~~~ 45 (122)
T d1g8fa3 4 KQGFSIVLGNSLTVSREQLSIALLSTFLQFGGGRYYKIFEHN 45 (122)
T ss_dssp GCCEEEEECTTCCSCHHHHHHHHHHHHTTSCSCCCEEECCCT
T ss_pred ccceEEEEeCCCCCCHHHHHHHHHHHHHHhcCCcceEEecCC
Confidence 35778899999999999999777 677764433 343 4554
No 234
>d3b60a2 f.37.1.1 (A:10-328) Multidrug resistance ABC transporter MsbA, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=86.08 E-value=13 Score=34.23 Aligned_cols=16 Identities=6% Similarity=-0.022 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHHHHH
Q 005740 135 LVAVASLIVAAVSEIT 150 (680)
Q Consensus 135 ~~~~~~~~~~~~~~l~ 150 (680)
-..++..++..++..+
T Consensus 15 k~~l~~~~i~~~~~~~ 30 (319)
T d3b60a2 15 KAGLIVAGIALILNAA 30 (319)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344444444443333
No 235
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=85.85 E-value=0.18 Score=46.50 Aligned_cols=23 Identities=26% Similarity=0.378 Sum_probs=20.2
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
-+.+||++|.|||+++.-|.+-.
T Consensus 45 n~lLvG~pGVGKTalv~~LA~ri 67 (195)
T d1jbka_ 45 NPVLIGEPGVGKTAIVEGLAQRI 67 (195)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred CeEEEecCCcccHHHHHHHHHHH
Confidence 46899999999999999988754
No 236
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=85.82 E-value=0.18 Score=47.12 Aligned_cols=71 Identities=13% Similarity=0.251 Sum_probs=44.5
Q ss_pred HccCCCeEEEeCCCCCC-CHHHHHHHHHHHHHHhccCCCCeEEEEEecCc-chHh--hcCEEEEEeCCEEEEecChHH
Q 005740 587 ILRDPAILLLDEATSAL-DSESEHYVKGVLHALRNDCKTKRTVIVIAHRL-STIK--AVDRIVVIDDGRIIEVGNHAE 660 (680)
Q Consensus 587 ll~~p~ILILDEaTSaL-D~~tE~~I~~~l~~l~~~~~~~~TvIvIaHRl-sti~--~aD~I~vl~~G~Ive~Gth~e 660 (680)
.+++.++|++||.-.-. +..+|..+...+....+ .|+.+|+.+.+. +.+. ..|-.=.+..|-+++--..+|
T Consensus 94 ~~~~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~---~~~~iiits~~~p~~l~~~~~dL~SRL~~g~~~~i~p~d~ 168 (213)
T d1l8qa2 94 MYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYL---LEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIELDNK 168 (213)
T ss_dssp HHHTCSEEEEECGGGGTTCHHHHHHHHHHHHHHHH---TTCEEEEEESSCGGGCTTSCHHHHHHHHTSEEEECCCCHH
T ss_pred HHhhccchhhhhhhhhcCchHHHHHHHHHHHHHhh---ccceEEEecCCcchhccccchHHHHHhhCceEEEECCCcH
Confidence 36689999999975433 57788889888888764 356666666653 2222 122222356777776544444
No 237
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=85.69 E-value=0.11 Score=49.15 Aligned_cols=23 Identities=26% Similarity=0.332 Sum_probs=19.0
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHh
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~ 484 (680)
.|+-+.|++|+|||||+..-+..
T Consensus 57 ~g~~~~i~apTGsGKT~~~~~~~ 79 (237)
T d1gkub1 57 RKESFAATAPTGVGKTSFGLAMS 79 (237)
T ss_dssp TTCCEECCCCBTSCSHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHHHH
Confidence 58889999999999998765544
No 238
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=85.31 E-value=0.19 Score=50.36 Aligned_cols=30 Identities=23% Similarity=0.342 Sum_probs=25.0
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCCCceE
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPSDGQI 494 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I 494 (680)
+|+|=|+-||||||+++.|...+......|
T Consensus 7 rI~IEG~iGsGKSTl~~~L~~~l~~~g~~v 36 (331)
T d1osna_ 7 RIYLDGAYGIGKTTAAEEFLHHFAITPNRI 36 (331)
T ss_dssp EEEEEESSSSCTTHHHHHHHHTTTTSGGGE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhhcCCce
Confidence 588999999999999999999887553333
No 239
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=84.88 E-value=0.2 Score=47.28 Aligned_cols=26 Identities=23% Similarity=0.332 Sum_probs=21.8
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCCCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYEPS 490 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~p~ 490 (680)
.+-|.||+|+||||+++++++.....
T Consensus 36 ~~Ll~Gp~G~GKtt~a~~~~~~l~~~ 61 (239)
T d1njfa_ 36 AYLFSGTRGVGKTSIARLLAKGLNCE 61 (239)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHCT
T ss_pred eEEEECCCCCcHHHHHHHHHHHhcCc
Confidence 47789999999999999998866433
No 240
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=84.86 E-value=0.24 Score=47.26 Aligned_cols=28 Identities=36% Similarity=0.457 Sum_probs=22.9
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYEP 489 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~p 489 (680)
.+..|.|.|+.|+||+++++.|-..-..
T Consensus 22 ~~~pvlI~Ge~GtGK~~~A~~ih~~s~~ 49 (247)
T d1ny5a2 22 AECPVLITGESGVGKEVVARLIHKLSDR 49 (247)
T ss_dssp CCSCEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred CCCCEEEECCCCcCHHHHHHHHHHhcCC
Confidence 3566899999999999999999764433
No 241
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=84.85 E-value=0.24 Score=48.05 Aligned_cols=23 Identities=30% Similarity=0.297 Sum_probs=20.5
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
-+.||||+|.|||+++.-|.+..
T Consensus 41 n~lLVG~~GvGKTalv~~la~ri 63 (268)
T d1r6bx2 41 NPLLVGESGVGKTAIAEGLAWRI 63 (268)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred CcEEECCCCCcHHHHHHHHHHHH
Confidence 57899999999999999988755
No 242
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=84.69 E-value=0.22 Score=49.77 Aligned_cols=25 Identities=40% Similarity=0.381 Sum_probs=20.3
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
-+|+|=|+-||||||++++|...+.
T Consensus 5 lrI~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 5 LRVYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEEEECSCTTSSHHHHHHHHTC---
T ss_pred eEEEEECCcCCCHHHHHHHHHHHhC
Confidence 4589999999999999999998664
No 243
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=83.85 E-value=0.19 Score=50.11 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=22.6
Q ss_pred eEEeeCCcEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 457 CLTIEANEVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 457 sl~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
-...++| .+-++||+|+|||.|++-|.+-.
T Consensus 118 ~~~~~~g-~~l~~G~pG~GKT~la~ala~~~ 147 (321)
T d1w44a_ 118 GHRYASG-MVIVTGKGNSGKTPLVHALGEAL 147 (321)
T ss_dssp TEEEESE-EEEEECSSSSCHHHHHHHHHHHH
T ss_pred hcccCCc-eEEEECCCCccHHHHHHHHHHHh
Confidence 3444444 45568999999999999999753
No 244
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=83.69 E-value=0.27 Score=45.51 Aligned_cols=24 Identities=25% Similarity=0.387 Sum_probs=21.4
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
.+-+.||.|+||||+++.+++.+-
T Consensus 26 ~lLl~Gp~G~GKtt~a~~~a~~l~ 49 (207)
T d1a5ta2 26 ALLIQALPGMGDDALIYALSRYLL 49 (207)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEEECCCCCcHHHHHHHHHHhcc
Confidence 488999999999999999998664
No 245
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=83.49 E-value=0.17 Score=49.45 Aligned_cols=30 Identities=17% Similarity=0.202 Sum_probs=25.2
Q ss_pred ceeEEeeCCcEEEEeCCCCCcHHHHHHHHh
Q 005740 455 HVCLTIEANEVVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 455 ~isl~I~~Ge~vAIVG~SGsGKSTL~~LL~ 484 (680)
|.=+.+-+|++++|+|++|+|||||+.-+.
T Consensus 60 D~l~pig~GQr~~If~~~g~GKt~ll~~~~ 89 (285)
T d2jdia3 60 DSLVPIGRGQRELIIGDRQTGKTSIAIDTI 89 (285)
T ss_dssp HHHSCCBTTCBCEEEESTTSSHHHHHHHHH
T ss_pred ecccCccCCCEEEeecCCCCChHHHHHHHH
Confidence 344688999999999999999999976444
No 246
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=82.98 E-value=0.1 Score=48.03 Aligned_cols=20 Identities=10% Similarity=0.240 Sum_probs=16.9
Q ss_pred CCcEEEEeCCCCCcHHHHHH
Q 005740 462 ANEVVAIVGLSGSGKSTFVN 481 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~ 481 (680)
.|+.+.+++|+|||||+.+-
T Consensus 39 ~~~~~il~apTGsGKT~~a~ 58 (202)
T d2p6ra3 39 SGKNLLLAMPTAAGKTLLAE 58 (202)
T ss_dssp TCSCEEEECSSHHHHHHHHH
T ss_pred cCCCEEEEcCCCCchhHHHH
Confidence 57778899999999998753
No 247
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=81.71 E-value=0.26 Score=46.20 Aligned_cols=22 Identities=32% Similarity=0.599 Sum_probs=19.6
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
.+.|.|.=|||||||++-|++-
T Consensus 5 v~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 5 VTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp EEEEEESSSSSCHHHHHHHHHS
T ss_pred EEEEeeCCCCCHHHHHHHHHhc
Confidence 5789999999999999998884
No 248
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=81.62 E-value=0.42 Score=43.81 Aligned_cols=24 Identities=25% Similarity=0.522 Sum_probs=21.2
Q ss_pred EEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
.+||+|.-.+|||||++-|.+...
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~~~~ 33 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITGIWT 33 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHSCCC
T ss_pred EEEEEEccCCcHHHHHHHHHhhhc
Confidence 489999999999999999987554
No 249
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=81.16 E-value=0.27 Score=45.39 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=28.6
Q ss_pred EeeCCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceE
Q 005740 459 TIEANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQI 494 (680)
Q Consensus 459 ~I~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I 494 (680)
.+|+-..+.|+||.++|||+++..|+++.. |.+
T Consensus 49 ~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~---G~v 81 (205)
T d1tuea_ 49 GTPKKNCLVFCGPANTGKSYFGMSFIHFIQ---GAV 81 (205)
T ss_dssp TCTTCSEEEEESCGGGCHHHHHHHHHHHHT---CEE
T ss_pred CCCCceEEEEECCCCccHHHHHHHHHHHhC---CEE
Confidence 357888999999999999999999999973 654
No 250
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=81.16 E-value=0.43 Score=46.05 Aligned_cols=29 Identities=28% Similarity=0.352 Sum_probs=24.0
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCCCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYEPS 490 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~ 490 (680)
.+-++++||.+-+|||||+|.|.|-....
T Consensus 111 ~~~~v~vvG~PNvGKSsliN~L~~~~~~~ 139 (273)
T d1puja_ 111 RAIRALIIGIPNVGKSTLINRLAKKNIAK 139 (273)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHTSCCC-
T ss_pred CceEEEEEecCccchhhhhhhhhccceEE
Confidence 34569999999999999999999966533
No 251
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=80.42 E-value=0.26 Score=47.60 Aligned_cols=25 Identities=12% Similarity=0.177 Sum_probs=20.0
Q ss_pred eeCCcEEEEeCCCCCcHHHH--HHHHh
Q 005740 460 IEANEVVAIVGLSGSGKSTF--VNLLL 484 (680)
Q Consensus 460 I~~Ge~vAIVG~SGsGKSTL--~~LL~ 484 (680)
+++|+.+-+.+|+|||||+. ..++.
T Consensus 6 ~~~~~~~lv~~~TGsGKT~~~l~~~~~ 32 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGKTKRYLPAIVR 32 (305)
T ss_dssp SSTTCEEEECCCTTSSTTTTHHHHHHH
T ss_pred hhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 56899999999999999973 34443
No 252
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=78.52 E-value=0.55 Score=43.92 Aligned_cols=19 Identities=37% Similarity=0.480 Sum_probs=17.9
Q ss_pred EEEeCCCCCcHHHHHHHHh
Q 005740 466 VAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~ 484 (680)
++++|.-.+|||||+.-|+
T Consensus 12 i~viGHVd~GKSTL~~~Ll 30 (222)
T d1zunb3 12 FLTCGNVDDGKSTLIGRLL 30 (222)
T ss_dssp EEEECCTTSSHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHH
Confidence 8999999999999999984
No 253
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=78.22 E-value=0.78 Score=46.12 Aligned_cols=26 Identities=31% Similarity=0.535 Sum_probs=20.3
Q ss_pred CcEEEEeCCCCCcHHHHH----HHHhcCCC
Q 005740 463 NEVVAIVGLSGSGKSTFV----NLLLRLYE 488 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~----~LL~r~y~ 488 (680)
+..+.|.|+.|+||||++ +.|.+.++
T Consensus 163 ~~~~vI~G~pGTGKTt~i~~~l~~l~~~~~ 192 (359)
T d1w36d1 163 RRISVISGGPGTGKTTTVAKLLAALIQMAD 192 (359)
T ss_dssp BSEEEEECCTTSTHHHHHHHHHHHHHHTCS
T ss_pred CCeEEEEcCCCCCceehHHHHHHHHHHHHh
Confidence 568999999999999887 44555554
No 254
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=76.55 E-value=0.58 Score=42.82 Aligned_cols=22 Identities=23% Similarity=0.442 Sum_probs=19.5
Q ss_pred EEEEeCCCCCcHHHHHHHHhcC
Q 005740 465 VVAIVGLSGSGKSTFVNLLLRL 486 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~r~ 486 (680)
-+||+|.-++|||||++-|.+.
T Consensus 5 ni~iiGHvd~GKSTL~~~l~~~ 26 (196)
T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITKI 26 (196)
T ss_dssp EEEEESSTTSSHHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHHH
Confidence 3899999999999999988764
No 255
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=75.87 E-value=0.47 Score=52.04 Aligned_cols=27 Identities=30% Similarity=0.522 Sum_probs=24.4
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+..+.|-|-|+||||||+-.|.+++++
T Consensus 84 ~~~QsIiisGeSGsGKTe~~k~il~yL 110 (684)
T d1lkxa_ 84 QENQCVIISGESGAGKTEASKKIMQFL 110 (684)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCCHHHHHHHHHHHH
Confidence 457899999999999999999998876
No 256
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=75.77 E-value=0.59 Score=43.53 Aligned_cols=38 Identities=11% Similarity=0.234 Sum_probs=25.8
Q ss_pred HHHHHHHHccCCCeEE----EeCCCCCCCHHHHHHHHHHHHHH
Q 005740 580 RIAIARAILRDPAILL----LDEATSALDSESEHYVKGVLHAL 618 (680)
Q Consensus 580 RIaIARAll~~p~ILI----LDEaTSaLD~~tE~~I~~~l~~l 618 (680)
.+.+|+++ +.+++++ +|.....-|.+.-+.+.+.+..+
T Consensus 132 ~l~~~~~~-~~~~iIv~iNK~D~~~~~~~~~~~~~v~~~i~~~ 173 (224)
T d1jnya3 132 HIILAKTM-GLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKF 173 (224)
T ss_dssp HHHHHHHT-TCTTCEEEEECGGGSSSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-CCCceEEEEEcccCCCccccHHHHHHHHHHHHhH
Confidence 57777776 5666776 68887777876666665555554
No 257
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=75.19 E-value=0.6 Score=45.88 Aligned_cols=20 Identities=45% Similarity=0.778 Sum_probs=17.6
Q ss_pred eCCcEEEEeCCCCCcHHHHH
Q 005740 461 EANEVVAIVGLSGSGKSTFV 480 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~ 480 (680)
+.|++..+-|-||+|||||-
T Consensus 12 ~~~~~alfFGLSGTGKTTLs 31 (313)
T d2olra1 12 EKGDVAVFFGLSGTGKTTLS 31 (313)
T ss_dssp TTSCEEEEECSTTSSHHHHH
T ss_pred CCCCEEEEEccCCCCcccce
Confidence 35888899999999999976
No 258
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=74.70 E-value=0.5 Score=52.04 Aligned_cols=28 Identities=25% Similarity=0.429 Sum_probs=25.0
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
+..+.+-|-|+||||||+-.|.+++++-
T Consensus 123 ~~nQsIiisGeSGaGKTe~~k~il~yL~ 150 (712)
T d1d0xa2 123 RQNQSLLITGESGAGKTENTKKVIQYLA 150 (712)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999773
No 259
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=74.48 E-value=0.57 Score=46.83 Aligned_cols=19 Identities=26% Similarity=0.506 Sum_probs=18.1
Q ss_pred EEEeCCCCCcHHHHHHHHh
Q 005740 466 VAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~ 484 (680)
|||+|..|+|||||+..|.
T Consensus 20 I~iiGhvd~GKTTL~d~Ll 38 (341)
T d1n0ua2 20 MSVIAHVDHGKSTLTDSLV 38 (341)
T ss_dssp EEEECCGGGTHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHH
Confidence 8999999999999999985
No 260
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=72.70 E-value=0.79 Score=43.26 Aligned_cols=20 Identities=40% Similarity=0.519 Sum_probs=17.7
Q ss_pred EEEEeCCCCCcHHHHHHHHh
Q 005740 465 VVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 465 ~vAIVG~SGsGKSTL~~LL~ 484 (680)
-++|+|..++|||||+.-|+
T Consensus 8 Ni~iiGHvD~GKsTl~~~ll 27 (239)
T d1f60a3 8 NVVVIGHVDSGKSTTTGHLI 27 (239)
T ss_dssp EEEEEECTTSCHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHH
Confidence 37999999999999998774
No 261
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=72.12 E-value=0.64 Score=47.27 Aligned_cols=20 Identities=30% Similarity=0.519 Sum_probs=17.3
Q ss_pred EEEeCCCCCcHHHHHHHHhc
Q 005740 466 VAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r 485 (680)
+.|||++|.|||+++.-|.+
T Consensus 46 ~llvG~~GvGKtaiv~~la~ 65 (387)
T d1qvra2 46 PVLIGEPGVGKTAIVEGLAQ 65 (387)
T ss_dssp CEEEECTTSCHHHHHHHHHH
T ss_pred CeEECCCCCCHHHHHHHHHH
Confidence 57899999999999986664
No 262
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=71.70 E-value=0.75 Score=45.29 Aligned_cols=19 Identities=42% Similarity=0.763 Sum_probs=16.8
Q ss_pred CCcEEEEeCCCCCcHHHHH
Q 005740 462 ANEVVAIVGLSGSGKSTFV 480 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~ 480 (680)
.|++..+-|.||+|||||-
T Consensus 13 ~~~valffGLSGTGKTTLs 31 (318)
T d1j3ba1 13 EGDVAVFFGLSGTGKTTLS 31 (318)
T ss_dssp TCCEEEEEECTTSCHHHHT
T ss_pred CCCEEEEEccCCCCccccc
Confidence 4788899999999999975
No 263
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=71.62 E-value=0.84 Score=44.95 Aligned_cols=19 Identities=42% Similarity=0.758 Sum_probs=17.3
Q ss_pred CCcEEEEeCCCCCcHHHHH
Q 005740 462 ANEVVAIVGLSGSGKSTFV 480 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~ 480 (680)
.|++..+-|-||+|||||-
T Consensus 13 ~gd~alfFGLSGTGKTTLs 31 (323)
T d1ii2a1 13 QGDVTVFFGLSGTGKTTLS 31 (323)
T ss_dssp TCCEEEEECCTTSSHHHHH
T ss_pred CCCEEEEEccCCCCcccce
Confidence 5788889999999999997
No 264
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=71.16 E-value=0.62 Score=51.94 Aligned_cols=27 Identities=26% Similarity=0.525 Sum_probs=24.6
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+..+.+-|-|+||||||+-.|.+++++
T Consensus 121 ~~~QsIiisGeSGaGKTe~~K~il~yL 147 (794)
T d2mysa2 121 RENQSILITGESGAGKTVNTKRVIQYF 147 (794)
T ss_dssp TCCEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999887
No 265
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=71.00 E-value=0.93 Score=43.35 Aligned_cols=17 Identities=24% Similarity=0.421 Sum_probs=14.0
Q ss_pred cEEEEeCCCCCcHHHHH
Q 005740 464 EVVAIVGLSGSGKSTFV 480 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~ 480 (680)
..+.|+|+.||||||.+
T Consensus 15 ~~~lI~g~aGTGKTt~l 31 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVI 31 (306)
T ss_dssp SEEEECCCTTSCHHHHH
T ss_pred CCEEEEeeCCccHHHHH
Confidence 34689999999999764
No 266
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=70.92 E-value=0.76 Score=44.50 Aligned_cols=17 Identities=29% Similarity=0.444 Sum_probs=14.0
Q ss_pred cEEEEeCCCCCcHHHHH
Q 005740 464 EVVAIVGLSGSGKSTFV 480 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~ 480 (680)
..+.|.|+.||||||.+
T Consensus 25 g~~lV~g~aGSGKTt~l 41 (318)
T d1pjra1 25 GPLLIMAGAGSGKTRVL 41 (318)
T ss_dssp SCEEEEECTTSCHHHHH
T ss_pred CCEEEEecCCccHHHHH
Confidence 34778999999999864
No 267
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=70.90 E-value=0.66 Score=42.46 Aligned_cols=108 Identities=12% Similarity=0.084 Sum_probs=66.6
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCHHHhhccEEEEccCCcCccccHHHHHhcCCCCCCCH
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTDLDIRWLREKIGFVGQEPQLLQMDIKSNIMYGCPKDVKN 541 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~~~~~~LR~~I~~V~Qd~~LF~gTI~eNI~~g~~~~~s~ 541 (680)
.+..+-+.||+|+||+|+++.+.+...-. +-..-| +=++ +| + | ..+.-
T Consensus 14 ~~~~~l~~G~~g~gk~~~a~~l~~~i~~~---------~~~h~D-------~~~i--~~---~---------~--~~I~I 61 (198)
T d2gnoa2 14 EGISILINGEDLSYPREVSLELPEYVEKF---------PPKASD-------VLEI--DP---E---------G--ENIGI 61 (198)
T ss_dssp SSEEEEEECSSSSHHHHHHHHHHHHHHTS---------CCCTTT-------EEEE--CC---S---------S--SCBCH
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHHhcc---------ccCCCC-------EEEE--eC---C---------c--CCCCH
Confidence 35678899999999999999988854211 000000 1111 00 0 2 24567
Q ss_pred HHHHHHHHHhcHHHHHHcCCCCcccccCCCCCChHHHHHHHHHHHHccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhcc
Q 005740 542 EDIEWAAKQAYVHEFILSLPCGYETLVDDDLLSGGQKQRIAIARAILRDPAILLLDEATSALDSESEHYVKGVLHALRND 621 (680)
Q Consensus 542 eei~~A~~~a~l~dfI~~LP~G~dT~vge~~LSGGQrQRIaIARAll~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~ 621 (680)
|+|++..+.+....+ .| +.+|+|+|||=. |..+....+.+.|++-
T Consensus 62 d~IR~i~~~~~~~~~-----~~--------------------------~~KviIId~ad~-l~~~aqNaLLK~LEEP--- 106 (198)
T d2gnoa2 62 DDIRTIKDFLNYSPE-----LY--------------------------TRKYVIVHDCER-MTQQAANAFLKALEEP--- 106 (198)
T ss_dssp HHHHHHHHHHTSCCS-----SS--------------------------SSEEEEETTGGG-BCHHHHHHTHHHHHSC---
T ss_pred HHHHHHHHHHhhCcc-----cC--------------------------CCEEEEEeCccc-cchhhhhHHHHHHhCC---
Confidence 788888777766443 22 358999999743 4556665555555543
Q ss_pred CCCCeEEEEEecCcch
Q 005740 622 CKTKRTVIVIAHRLST 637 (680)
Q Consensus 622 ~~~~~TvIvIaHRlst 637 (680)
.++...|++|++.+.
T Consensus 107 -p~~t~fiLit~~~~~ 121 (198)
T d2gnoa2 107 -PEYAVIVLNTRRWHY 121 (198)
T ss_dssp -CTTEEEEEEESCGGG
T ss_pred -CCCceeeeccCChhh
Confidence 345677889999754
No 268
>d2hyda2 f.37.1.1 (A:1-323) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=70.67 E-value=39 Score=30.73 Aligned_cols=11 Identities=9% Similarity=0.063 Sum_probs=4.5
Q ss_pred hHHHHHHhCch
Q 005740 304 MMRTVRVYGTE 314 (680)
Q Consensus 304 gi~~Ik~f~~e 314 (680)
.++-++.-..-
T Consensus 206 ~~~~~~~Ik~~ 216 (323)
T d2hyda2 206 RVQGISVVKSF 216 (323)
T ss_dssp HHHHHHHHHHT
T ss_pred HhcCCchhhhH
Confidence 34444444333
No 269
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=69.61 E-value=1 Score=49.45 Aligned_cols=27 Identities=19% Similarity=0.380 Sum_probs=24.3
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+..+.|-|-|+||||||+-.|.+++++
T Consensus 89 ~~~Q~IiisGeSGaGKTe~~k~il~yL 115 (710)
T d1br2a2 89 REDQSILCTGESGAGKTENTKKVIQYL 115 (710)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 356899999999999999999998886
No 270
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=69.30 E-value=0.78 Score=51.07 Aligned_cols=27 Identities=26% Similarity=0.380 Sum_probs=24.3
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
..+.+-|-|+||||||.-.|.++++.-
T Consensus 120 ~nQ~IiisGESGaGKTe~~K~il~yL~ 146 (789)
T d1kk8a2 120 ENQSCLITGESGAGKTENTKKVIMYLA 146 (789)
T ss_dssp SEEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999863
No 271
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=69.11 E-value=0.99 Score=41.40 Aligned_cols=41 Identities=24% Similarity=0.276 Sum_probs=28.3
Q ss_pred CcEEEEe-CCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCC
Q 005740 463 NEVVAIV-GLSGSGKSTFVNLLLRLYEPSDGQIYIDGFPLTD 503 (680)
Q Consensus 463 Ge~vAIV-G~SGsGKSTL~~LL~r~y~p~~G~I~idG~di~~ 503 (680)
|++||+. +.-|+||||+.--|+..+.-..-++.+=+-|+..
T Consensus 2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~~~ 43 (237)
T d1g3qa_ 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTM 43 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTS
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 6789999 7788999999998887776332244332234443
No 272
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=68.61 E-value=0.94 Score=49.94 Aligned_cols=27 Identities=30% Similarity=0.573 Sum_probs=24.5
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCC
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y 487 (680)
+..+.+-|-|+||||||+-.|.++++.
T Consensus 92 ~~~Q~IiisGeSGsGKTe~~k~il~~l 118 (730)
T d1w7ja2 92 ERNQSIIVSGESGAGKTVSAKYAMRYF 118 (730)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999976
No 273
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=67.84 E-value=1.2 Score=39.78 Aligned_cols=20 Identities=25% Similarity=0.321 Sum_probs=15.6
Q ss_pred EEEeCCCCCcHHHHHHHHhc
Q 005740 466 VAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r 485 (680)
+-+++|+|||||.+.-+++.
T Consensus 26 ~lv~~pTGsGKT~i~~~~~~ 45 (200)
T d1wp9a1 26 CLIVLPTGLGKTLIAMMIAE 45 (200)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred eEEEeCCCCcHHHHHHHHHH
Confidence 45889999999987665554
No 274
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=64.85 E-value=1.1 Score=42.30 Aligned_cols=19 Identities=32% Similarity=0.520 Sum_probs=17.6
Q ss_pred EEEeCCCCCcHHHHHHHHh
Q 005740 466 VAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~ 484 (680)
++|+|.-++|||||+.-|+
T Consensus 27 i~iiGHVD~GKSTL~~~Ll 45 (245)
T d1r5ba3 27 IVFIGHVDAGKSTLGGNIL 45 (245)
T ss_dssp EEEEECGGGTHHHHHHHHH
T ss_pred EEEEeeCCCCHHHHHHHHH
Confidence 8999999999999999883
No 275
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=62.12 E-value=1.8 Score=37.10 Aligned_cols=25 Identities=28% Similarity=0.282 Sum_probs=20.0
Q ss_pred CcEEEEeCCCCCcHHH-HHHHHhcCC
Q 005740 463 NEVVAIVGLSGSGKST-FVNLLLRLY 487 (680)
Q Consensus 463 Ge~vAIVG~SGsGKST-L~~LL~r~y 487 (680)
|....|+||=.||||| |++.+-|+-
T Consensus 2 G~L~~i~GpMfsGKTteLi~~~~~~~ 27 (139)
T d2b8ta1 2 GWIEFITGPMFAGKTAELIRRLHRLE 27 (139)
T ss_dssp CEEEEEECSTTSCHHHHHHHHHHHHH
T ss_pred cEEEEEEccccCHHHHHHHHHHHHHH
Confidence 6778899999999999 666665553
No 276
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=61.25 E-value=2.5 Score=37.09 Aligned_cols=63 Identities=17% Similarity=0.192 Sum_probs=43.0
Q ss_pred HHHHHHcc--CCCeEEEeCCCCCCCH--HHHHHHHHHHHHHhccCCCCeEEEEEecC-c--chHhhcCEEEEEeC
Q 005740 582 AIARAILR--DPAILLLDEATSALDS--ESEHYVKGVLHALRNDCKTKRTVIVIAHR-L--STIKAVDRIVVIDD 649 (680)
Q Consensus 582 aIARAll~--~p~ILILDEaTSaLD~--~tE~~I~~~l~~l~~~~~~~~TvIvIaHR-l--sti~~aD~I~vl~~ 649 (680)
..||..+. +.+++||||-..|++- .+|..|.+.|++. .+ .+=+++|=| . +.+..||.|--|..
T Consensus 84 ~~a~~~~~~~~~dllILDEi~~Ai~~gli~~~~v~~ll~~r----p~-~~evVlTGr~~p~~L~e~ADlVTEm~~ 153 (157)
T d1g5ta_ 84 QHGKRMLADPLLDMVVLDELTYMVAYDYLPLEEVISALNAR----PG-HQTVIITGRGCHRDILDLADTVSELRP 153 (157)
T ss_dssp HHHHHHTTCTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTS----CT-TCEEEEECSSCCHHHHHHCSEEEECCC
T ss_pred HHHHHHhhcCccCEEeHHHHHHHHHcCCCCHHHHHHHHHhC----CC-CCEEEEECCCCCHHHHHhcceeeeeee
Confidence 33555444 3689999999998865 5888998888763 23 344555544 3 45778999877653
No 277
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=55.54 E-value=2.6 Score=37.65 Aligned_cols=33 Identities=15% Similarity=0.072 Sum_probs=24.4
Q ss_pred cEEEEeCCC-CCcHHHHHHHHhcCCCCCCceEEE
Q 005740 464 EVVAIVGLS-GSGKSTFVNLLLRLYEPSDGQIYI 496 (680)
Q Consensus 464 e~vAIVG~S-GsGKSTL~~LL~r~y~p~~G~I~i 496 (680)
+++-|.|.. |+||||+.-.|++...-..=++.+
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~ 35 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAG 35 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEE
Confidence 578899995 999999999888877533224433
No 278
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=53.84 E-value=3 Score=39.09 Aligned_cols=28 Identities=39% Similarity=0.364 Sum_probs=23.1
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCCCCCCc
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLYEPSDG 492 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y~p~~G 492 (680)
.+|||.|.=|+||||+.-.|...+. ..|
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA-~~G 29 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLH-AMG 29 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHH-TTT
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHH-hCC
Confidence 4799999999999999988777765 345
No 279
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=52.49 E-value=3.5 Score=37.07 Aligned_cols=28 Identities=14% Similarity=0.255 Sum_probs=20.6
Q ss_pred CCcEEEEeCCCCCcHHHH--HHHHhcCCCC
Q 005740 462 ANEVVAIVGLSGSGKSTF--VNLLLRLYEP 489 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL--~~LL~r~y~p 489 (680)
.|+-+.+..|||||||.- +-++.++...
T Consensus 37 ~G~dvii~a~TGSGKTlayllp~l~~~~~~ 66 (209)
T d1q0ua_ 37 RGESMVGQSQTGTGKTHAYLLPIMEKIKPE 66 (209)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHHHHHCCTT
T ss_pred CCCCeEeecccccccceeeeeeeccccccc
Confidence 478899999999999974 3444555543
No 280
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=49.16 E-value=3 Score=36.25 Aligned_cols=33 Identities=27% Similarity=0.453 Sum_probs=22.3
Q ss_pred cEEEEeCCCCC-cHHHHHHHHhcCCCCCCceEEECCeeC
Q 005740 464 EVVAIVGLSGS-GKSTFVNLLLRLYEPSDGQIYIDGFPL 501 (680)
Q Consensus 464 e~vAIVG~SGs-GKSTL~~LL~r~y~p~~G~I~idG~di 501 (680)
++++|.|.||| |++|| +.+.++ |+ +..+.|.--
T Consensus 3 K~I~IlGsTGSIG~~tL-~Vi~~~--~d--~f~v~~lsa 36 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTL-DLIERN--LD--RYQVIALTA 36 (150)
T ss_dssp EEEEEETTTSHHHHHHH-HHHHHT--GG--GEEEEEEEE
T ss_pred cEEEEECCCcHHHHHHH-HHHHcC--CC--CcEEEEEEe
Confidence 78999999997 88886 555552 22 455555433
No 281
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=46.05 E-value=3.4 Score=37.01 Aligned_cols=24 Identities=21% Similarity=0.182 Sum_probs=18.8
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHh
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLL 484 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~ 484 (680)
-.|+-+.++-|||||||-...+..
T Consensus 38 l~g~~vlv~apTGsGKT~~~~~~~ 61 (206)
T d1oywa2 38 LSGRDCLVVMPTGGGKSLCYQIPA 61 (206)
T ss_dssp HTTCCEEEECSCHHHHHHHHHHHH
T ss_pred HcCCCEEEEcCCCCCCcchhhhhh
Confidence 457778999999999987765443
No 282
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.04 E-value=5.8 Score=39.02 Aligned_cols=26 Identities=19% Similarity=0.204 Sum_probs=21.8
Q ss_pred EEeeCCcEEEEeC--CCCCcHHHHHHHH
Q 005740 458 LTIEANEVVAIVG--LSGSGKSTFVNLL 483 (680)
Q Consensus 458 l~I~~Ge~vAIVG--~SGsGKSTL~~LL 483 (680)
++=|.|++.-+.| ||+||||+++-|.
T Consensus 11 vt~P~g~~~yvaaAFPSaCGKTnlAMl~ 38 (363)
T d1khba1 11 ITNPEGEKKYLAAAFPSACGKTNLAMMN 38 (363)
T ss_dssp EECTTSCEEEEEEECCTTSCHHHHHTCC
T ss_pred ecCCCCCEEEEEEecCccccchhHHHhC
Confidence 4556799999998 8999999998763
No 283
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=42.90 E-value=4.7 Score=36.40 Aligned_cols=25 Identities=24% Similarity=0.377 Sum_probs=20.9
Q ss_pred cEEEEe-CCCCCcHHHHHHHHhcCCC
Q 005740 464 EVVAIV-GLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 464 e~vAIV-G~SGsGKSTL~~LL~r~y~ 488 (680)
++|+++ |.-|+||||+.--|+..+.
T Consensus 2 kvIav~s~KGGvGKTtia~nlA~~la 27 (232)
T d1hyqa_ 2 RTITVASGKGGTGKTTITANLGVALA 27 (232)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCChHHHHHHHHHHHHH
Confidence 468888 7788999999998887775
No 284
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=42.45 E-value=6.3 Score=35.42 Aligned_cols=24 Identities=25% Similarity=0.271 Sum_probs=18.6
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhc
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r 485 (680)
.++...|+.|+|+|||-++-.++.
T Consensus 84 ~~~~~ll~~~tG~GKT~~a~~~~~ 107 (206)
T d2fz4a1 84 VDKRGCIVLPTGSGKTHVAMAAIN 107 (206)
T ss_dssp TTSEEEEEESSSTTHHHHHHHHHH
T ss_pred hCCCcEEEeCCCCCceehHHhHHH
Confidence 566778999999999977655554
No 285
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=42.25 E-value=6.8 Score=36.51 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=18.7
Q ss_pred eCCcEEE-EeCCCCCcHHHHHHHHhcCC
Q 005740 461 EANEVVA-IVGLSGSGKSTFVNLLLRLY 487 (680)
Q Consensus 461 ~~Ge~vA-IVG~SGsGKSTL~~LL~r~y 487 (680)
++|.+|. +.|+=|.||||+.-.|...+
T Consensus 17 ~~~~~iii~sGKGGVGKTT~a~nLA~~l 44 (279)
T d1ihua2 17 RNEHGLIMLMGKGGVGKTTMAAAIAVRL 44 (279)
T ss_dssp TTSCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred cCCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 4455554 45999999999866665544
No 286
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.22 E-value=6.4 Score=33.10 Aligned_cols=27 Identities=30% Similarity=0.320 Sum_probs=20.7
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
+|....|+||=.|||||-+--..+-|+
T Consensus 1 ~G~L~li~GpMfsGKTt~Li~~~~~~~ 27 (133)
T d1xbta1 1 RGQIQVILGPMFSGKSTELMRRVRRFQ 27 (133)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CcEEEEEEecccCHHHHHHHHHHHHHH
Confidence 588899999999999995544444454
No 287
>d2ooda1 b.92.1.4 (A:3-72,A:398-467) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]}
Probab=41.66 E-value=6.2 Score=33.69 Aligned_cols=25 Identities=24% Similarity=0.376 Sum_probs=21.9
Q ss_pred cCEEEEEeCCEEEEecChHHHhhcC
Q 005740 641 VDRIVVIDDGRIIEVGNHAELLHKG 665 (680)
Q Consensus 641 aD~I~vl~~G~Ive~Gth~eLl~~~ 665 (680)
-|=.+++++|+|++.|++++|.++.
T Consensus 32 ~DG~llie~G~I~a~G~~~~l~~~~ 56 (140)
T d2ooda1 32 QDGLMVVTDGVIKAFGPYEKIAAAH 56 (140)
T ss_dssp EEEEEEEESSBEEEEEEHHHHHHHS
T ss_pred cCcEEEEeCCEEEEecCHHHHhhcC
Confidence 4678999999999999999998653
No 288
>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}
Probab=41.14 E-value=4.5 Score=35.05 Aligned_cols=21 Identities=33% Similarity=0.594 Sum_probs=16.3
Q ss_pred cEEEEeCCCCC-cHHHHHHHHhc
Q 005740 464 EVVAIVGLSGS-GKSTFVNLLLR 485 (680)
Q Consensus 464 e~vAIVG~SGs-GKSTL~~LL~r 485 (680)
++++|.|.||| |+||| +.+.+
T Consensus 2 K~I~IlGsTGSIG~~tL-~Vi~~ 23 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTL-DVVRH 23 (151)
T ss_dssp EEEEEETTTSHHHHHHH-HHHHH
T ss_pred CeEEEEcCCcHHHHHHH-HHHHh
Confidence 47899999997 88886 45544
No 289
>d2vqei1 d.14.1.1 (I:2-128) Ribosomal protein S9 {Thermus thermophilus [TaxId: 274]}
Probab=40.22 E-value=1.9 Score=36.41 Aligned_cols=16 Identities=19% Similarity=0.702 Sum_probs=12.8
Q ss_pred CCCCceEEECCeeCCC
Q 005740 488 EPSDGQIYIDGFPLTD 503 (680)
Q Consensus 488 ~p~~G~I~idG~di~~ 503 (680)
.|-+|+|.|||.|+.+
T Consensus 19 ~~G~G~I~IN~~~~~~ 34 (127)
T d2vqei1 19 RPGNGKVTVNGQDFNE 34 (127)
T ss_dssp EESSCCEEESSSBHHH
T ss_pred EcCCceEEEechhHhh
Confidence 3578999999988754
No 290
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=38.28 E-value=6.7 Score=36.27 Aligned_cols=27 Identities=19% Similarity=0.356 Sum_probs=22.7
Q ss_pred CCcEEEEeCCCCCcHHH--HHHHHhcCCC
Q 005740 462 ANEVVAIVGLSGSGKST--FVNLLLRLYE 488 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKST--L~~LL~r~y~ 488 (680)
.|+-+.+..|||||||. ++-+|.++..
T Consensus 57 ~g~dvvi~a~TGsGKTlayllp~l~~l~~ 85 (238)
T d1wrba1 57 EHRDIMACAQTGSGKTAAFLIPIINHLVC 85 (238)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCCCcceeeHHHHHHHHHh
Confidence 68889999999999999 7777777653
No 291
>d1gg4a4 c.72.2.1 (A:99-312) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]}
Probab=37.56 E-value=9.1 Score=33.75 Aligned_cols=27 Identities=26% Similarity=0.418 Sum_probs=23.1
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCCCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYEPS 490 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~p~ 490 (680)
|++.|||.|.. ||||...+|.-.++-.
T Consensus 1 p~kvI~VTGTn--GKTTt~~mi~~iL~~~ 27 (214)
T d1gg4a4 1 PARVVALTGSS--GKTSVKEMTAAILSQC 27 (214)
T ss_dssp CCEEEEEECSS--CHHHHHHHHHHHHTTT
T ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHHhC
Confidence 67899999987 5999999999988744
No 292
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=37.33 E-value=8.7 Score=34.13 Aligned_cols=20 Identities=30% Similarity=0.448 Sum_probs=17.4
Q ss_pred EEEeCCCCCcHHHHHHHHhc
Q 005740 466 VAIVGLSGSGKSTFVNLLLR 485 (680)
Q Consensus 466 vAIVG~SGsGKSTL~~LL~r 485 (680)
+-|.|.+.||||..+.-|..
T Consensus 2 iLVtGGarSGKS~~AE~l~~ 21 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIG 21 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHC
T ss_pred EEEECCCCccHHHHHHHHHh
Confidence 57899999999999987764
No 293
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=36.37 E-value=6.2 Score=41.27 Aligned_cols=17 Identities=29% Similarity=0.444 Sum_probs=14.2
Q ss_pred cEEEEeCCCCCcHHHHH
Q 005740 464 EVVAIVGLSGSGKSTFV 480 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~ 480 (680)
..+.|+|.-||||||.+
T Consensus 25 ~~~lV~A~AGSGKT~~l 41 (623)
T g1qhh.1 25 GPLLIMAGAGSGKTRVL 41 (623)
T ss_dssp SCEEEEECTTSCHHHHH
T ss_pred CCEEEEEeCchHHHHHH
Confidence 44788899999998876
No 294
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=34.56 E-value=9.7 Score=34.39 Aligned_cols=31 Identities=23% Similarity=0.303 Sum_probs=22.0
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHHH
Q 005740 588 LRDPAILLLDEATSALDSESEHYVKGVLHAL 618 (680)
Q Consensus 588 l~~p~ILILDEaTSaLD~~tE~~I~~~l~~l 618 (680)
+++.+.+|+|||-.-+|..-+..+.+-++.+
T Consensus 149 l~~l~~lVlDEad~lld~~f~~~v~~I~~~~ 179 (212)
T d1qdea_ 149 TDKIKMFILDEADEMLSSGFKEQIYQIFTLL 179 (212)
T ss_dssp CTTCCEEEEETHHHHHHTTCHHHHHHHHHHS
T ss_pred cCcceEEeehhhhhhcccchHHHHHHHHHhC
Confidence 4567777799998777766666666666655
No 295
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=34.22 E-value=9.3 Score=35.92 Aligned_cols=31 Identities=32% Similarity=0.389 Sum_probs=22.3
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCCCCCCc-eEE
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLYEPSDG-QIY 495 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y~p~~G-~I~ 495 (680)
.++||.|+=|.||||+.--|...+- ..| +|+
T Consensus 3 r~IaisgKGGVGKTT~a~NLA~~LA-~~G~rVL 34 (289)
T d2afhe1 3 RQCAIYGKGGIGKSTTTQNLVAALA-EMGKKVM 34 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHH-HTTCCEE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHH-HCCCCEE
Confidence 5789999999999997766655442 335 444
No 296
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=32.81 E-value=9.2 Score=32.48 Aligned_cols=27 Identities=33% Similarity=0.154 Sum_probs=20.1
Q ss_pred CCcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 462 ANEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 462 ~Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
.|..-.|+||=.|||||-+--..+-|+
T Consensus 6 ~G~l~lI~GpMfSGKTteLi~~~~~~~ 32 (141)
T d1xx6a1 6 HGWVEVIVGPMYSGKSEELIRRIRRAK 32 (141)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred ceeEEEEEeccccHHHHHHHHHHHHhh
Confidence 588899999999999996543333343
No 297
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.78 E-value=10 Score=33.76 Aligned_cols=31 Identities=26% Similarity=0.466 Sum_probs=23.0
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHHH
Q 005740 588 LRDPAILLLDEATSALDSESEHYVKGVLHAL 618 (680)
Q Consensus 588 l~~p~ILILDEaTSaLD~~tE~~I~~~l~~l 618 (680)
+.+-+.+|+|||--=+|..-+..+.+-++.+
T Consensus 141 l~~l~~lV~DEaD~l~~~~f~~~v~~I~~~l 171 (206)
T d1s2ma1 141 LSDCSLFIMDEADKMLSRDFKTIIEQILSFL 171 (206)
T ss_dssp CTTCCEEEEESHHHHSSHHHHHHHHHHHTTS
T ss_pred cccceEEEeechhhhhhhhhHHHHHHHHHhC
Confidence 5567789999998888876666666555554
No 298
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.32 E-value=11 Score=33.74 Aligned_cols=30 Identities=20% Similarity=0.383 Sum_probs=19.5
Q ss_pred ccCCCeEEEeCCCCCCCH-HHHHHHHHHHHH
Q 005740 588 LRDPAILLLDEATSALDS-ESEHYVKGVLHA 617 (680)
Q Consensus 588 l~~p~ILILDEaTSaLD~-~tE~~I~~~l~~ 617 (680)
+++=+.+++|||-.=+|. .-+..+.+.++.
T Consensus 143 l~~l~~lVlDEaD~ll~~~~~~~~i~~I~~~ 173 (207)
T d1t6na_ 143 LKHIKHFILDECDKMLEQLDMRRDVQEIFRM 173 (207)
T ss_dssp CTTCCEEEEESHHHHHSSHHHHHHHHHHHHT
T ss_pred ccccceeehhhhhhhhhcCCcHHHHHHHHHh
Confidence 466778999999777774 445445444433
No 299
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.83 E-value=9.2 Score=34.93 Aligned_cols=42 Identities=26% Similarity=0.338 Sum_probs=27.9
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEe
Q 005740 588 LRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIA 632 (680)
Q Consensus 588 l~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIa 632 (680)
+++=+.||+|||=-=||..-+..+.+.++.+.+ ...|+++-|
T Consensus 157 ~~~l~~lVlDEaD~ll~~~f~~~i~~I~~~l~~---~~Q~ilfSA 198 (222)
T d2j0sa1 157 TRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP---ATQVVLISA 198 (222)
T ss_dssp CTTCCEEEEETHHHHTSTTTHHHHHHHHTTSCT---TCEEEEEES
T ss_pred cccceeeeecchhHhhhcCcHHHHHHHHHhCCC---CCEEEEEEE
Confidence 356679999999888887777777666655532 224555444
No 300
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=29.23 E-value=15 Score=34.11 Aligned_cols=25 Identities=16% Similarity=0.163 Sum_probs=19.7
Q ss_pred cEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 464 EVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 464 e~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
..+.+.|+=|.||||+.-.|+..+.
T Consensus 9 ~~i~~sGKGGVGKTTvaa~lA~~lA 33 (296)
T d1ihua1 9 PYLFFTGKGGVGKTSISCATAIRLA 33 (296)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred eEEEEECCCcChHHHHHHHHHHHHH
Confidence 4677899999999997776666653
No 301
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=27.17 E-value=18 Score=32.13 Aligned_cols=30 Identities=27% Similarity=0.335 Sum_probs=19.9
Q ss_pred cCCCeEEEeCCCCCCCHHHHHHHHHHHHHH
Q 005740 589 RDPAILLLDEATSALDSESEHYVKGVLHAL 618 (680)
Q Consensus 589 ~~p~ILILDEaTSaLD~~tE~~I~~~l~~l 618 (680)
++=+.+|+|||---+|..-+..+.+-++.+
T Consensus 144 ~~l~~lViDEad~l~~~~~~~~i~~I~~~~ 173 (208)
T d1hv8a1 144 KNVKYFILDEADEMLNMGFIKDVEKILNAC 173 (208)
T ss_dssp TSCCEEEEETHHHHHTTTTHHHHHHHHHTS
T ss_pred ccCcEEEEEChHHhhcCCChHHHHHHHHhC
Confidence 344588889987767766666666555544
No 302
>d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=23.79 E-value=21 Score=31.42 Aligned_cols=27 Identities=26% Similarity=0.425 Sum_probs=22.0
Q ss_pred eCCcEEEEeCCCCCcHHHHHHHHhcCCCC
Q 005740 461 EANEVVAIVGLSGSGKSTFVNLLLRLYEP 489 (680)
Q Consensus 461 ~~Ge~vAIVG~SGsGKSTL~~LL~r~y~p 489 (680)
++.+++||.|.+ ||||...+|.-+++.
T Consensus 12 ~~~~~iAITGTn--GKTTt~~~l~~iL~~ 38 (207)
T d1j6ua3 12 EKKEEFAVTGTD--GKTTTTAMVAHVLKH 38 (207)
T ss_dssp HCCCEEEEECSS--SHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC--CHHHHHHHHHHHHHh
Confidence 457899999987 599999998777753
No 303
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.59 E-value=19 Score=32.45 Aligned_cols=42 Identities=19% Similarity=0.308 Sum_probs=25.3
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEe
Q 005740 588 LRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIA 632 (680)
Q Consensus 588 l~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIa 632 (680)
+++-+.+|+|||=-=+|..-+..+.+.++.+.+ +.+|+++-|
T Consensus 153 ~~~l~~lVlDEaD~ll~~~f~~~~~~Il~~~~~---~~Q~il~SA 194 (218)
T d2g9na1 153 PKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNS---NTQVVLLSA 194 (218)
T ss_dssp STTCCEEEEESHHHHHHTTCHHHHHHHHHHSCT---TCEEEEEES
T ss_pred cccceEEEeeecchhhcCchHHHHHHHHHhCCC---CCeEEEEEe
Confidence 346789999998666665556666655555532 234555444
No 304
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.56 E-value=18 Score=32.29 Aligned_cols=42 Identities=17% Similarity=0.346 Sum_probs=28.5
Q ss_pred ccCCCeEEEeCCCCCCCHHHHHHHHHHHHHHhccCCCCeEEEEEe
Q 005740 588 LRDPAILLLDEATSALDSESEHYVKGVLHALRNDCKTKRTVIVIA 632 (680)
Q Consensus 588 l~~p~ILILDEaTSaLD~~tE~~I~~~l~~l~~~~~~~~TvIvIa 632 (680)
+++-+.+|+|||--=+|..-+..+.+.++.+.+ +.+++++-|
T Consensus 144 ~~~l~~lVlDEaD~ll~~~f~~~i~~I~~~~~~---~~Q~~l~SA 185 (206)
T d1veca_ 144 VDHVQMIVLDEADKLLSQDFVQIMEDIILTLPK---NRQILLYSA 185 (206)
T ss_dssp CTTCCEEEEETHHHHTSTTTHHHHHHHHHHSCT---TCEEEEEES
T ss_pred ccccceEEEeccccccccchHHHHHHHHHhCCC---CCEEEEEEe
Confidence 456789999999888887777777777766532 224555544
No 305
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=21.42 E-value=17 Score=34.22 Aligned_cols=26 Identities=27% Similarity=0.286 Sum_probs=20.4
Q ss_pred CcEEEEeCCCCCcHHHHHHHHhcCCC
Q 005740 463 NEVVAIVGLSGSGKSTFVNLLLRLYE 488 (680)
Q Consensus 463 Ge~vAIVG~SGsGKSTL~~LL~r~y~ 488 (680)
...-.++=|+|+|||-++-++.+.+.
T Consensus 128 ~~~~il~~pTGsGKT~i~~~i~~~~~ 153 (282)
T d1rifa_ 128 NRRRILNLPTSAGRSLIQALLARYYL 153 (282)
T ss_dssp HSEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred cCCceeEEEcccCccHHHHHHHHHhh
Confidence 34567778999999988888877663
Done!