Query 005745
Match_columns 679
No_of_seqs 395 out of 1998
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 06:17:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005745.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005745hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gsl_A Ubiquitin-like modifier 100.0 3E-140 9E-145 1187.7 47.2 584 13-678 7-597 (615)
2 3vh1_A Ubiquitin-like modifier 100.0 3E-133 1E-137 1130.1 41.1 584 13-678 8-598 (598)
3 3vx8_D Ubiquitin-like modifier 100.0 1.5E-81 5E-86 667.7 27.7 317 12-332 6-323 (323)
4 3vx6_A E1; 2.60A {Kluyveromyce 100.0 1.8E-75 6.2E-80 609.5 17.5 275 12-334 6-283 (283)
5 3t7h_A Ubiquitin-like modifier 100.0 1.2E-74 4E-79 606.6 20.0 279 13-329 7-291 (291)
6 3rui_A Ubiquitin-like modifier 100.0 7E-73 2.4E-77 603.8 27.6 303 332-678 2-305 (340)
7 3h8v_A Ubiquitin-like modifier 100.0 2E-41 7E-46 355.5 19.8 240 345-660 13-275 (292)
8 1zud_1 Adenylyltransferase THI 100.0 4.2E-40 1.4E-44 338.4 23.4 234 345-659 6-246 (251)
9 1jw9_B Molybdopterin biosynthe 100.0 1.6E-38 5.5E-43 326.1 23.3 233 346-658 10-249 (249)
10 3h5n_A MCCB protein; ubiquitin 100.0 1.5E-38 5.1E-43 342.2 20.6 242 345-659 92-352 (353)
11 1tt5_B Ubiquitin-activating en 100.0 2.4E-34 8.2E-39 316.9 22.9 137 360-517 36-185 (434)
12 2nvu_B Maltose binding protein 100.0 1.9E-32 6.6E-37 322.2 23.4 138 359-517 405-556 (805)
13 1y8q_B Anthracycline-, ubiquit 100.0 9.1E-32 3.1E-36 307.0 22.7 194 353-605 6-201 (640)
14 3cmm_A Ubiquitin-activating en 100.0 3.8E-32 1.3E-36 324.5 17.5 235 309-603 358-617 (1015)
15 1y8q_A Ubiquitin-like 1 activa 100.0 3.2E-31 1.1E-35 284.4 22.4 153 345-518 16-170 (346)
16 1tt5_A APPBP1, amyloid protein 100.0 2.2E-32 7.6E-37 308.1 11.5 214 342-601 9-231 (531)
17 3cmm_A Ubiquitin-activating en 99.9 7.9E-28 2.7E-32 287.4 17.9 148 345-516 7-157 (1015)
18 3jyo_A Quinate/shikimate dehyd 98.1 8.9E-06 3E-10 84.8 9.2 80 361-483 124-203 (283)
19 3tnl_A Shikimate dehydrogenase 97.8 7.3E-05 2.5E-09 79.1 11.3 85 361-483 151-235 (315)
20 3ic5_A Putative saccharopine d 97.8 0.00017 5.9E-09 62.8 11.5 95 364-505 5-99 (118)
21 3t4e_A Quinate/shikimate dehyd 97.6 0.00022 7.6E-09 75.3 11.0 85 362-484 146-230 (312)
22 4ina_A Saccharopine dehydrogen 97.4 0.00076 2.6E-08 73.3 11.7 101 365-505 2-106 (405)
23 3tum_A Shikimate dehydrogenase 97.3 0.00049 1.7E-08 71.2 9.2 57 362-440 123-179 (269)
24 3abi_A Putative uncharacterize 97.3 0.00046 1.6E-08 73.6 9.1 93 364-506 16-108 (365)
25 2g1u_A Hypothetical protein TM 97.1 0.0034 1.2E-07 58.4 11.9 37 360-397 15-51 (155)
26 2egg_A AROE, shikimate 5-dehyd 97.1 0.00072 2.5E-08 70.6 7.5 77 362-485 139-215 (297)
27 3pwz_A Shikimate dehydrogenase 97.1 0.00077 2.6E-08 69.7 7.5 49 362-432 118-166 (272)
28 3llv_A Exopolyphosphatase-rela 97.1 0.0028 9.7E-08 57.6 10.4 94 363-503 5-99 (141)
29 2hmt_A YUAA protein; RCK, KTN, 97.0 0.0017 5.7E-08 58.4 8.2 36 361-397 3-38 (144)
30 2z2v_A Hypothetical protein PH 97.0 0.0014 4.8E-08 70.4 8.7 94 363-506 15-108 (365)
31 3oj0_A Glutr, glutamyl-tRNA re 96.8 0.0013 4.5E-08 60.4 5.8 71 364-485 21-91 (144)
32 3o8q_A Shikimate 5-dehydrogena 96.8 0.0018 6.1E-08 67.3 7.4 50 362-433 124-173 (281)
33 1lss_A TRK system potassium up 96.8 0.0086 2.9E-07 53.4 10.7 90 364-499 4-94 (140)
34 1id1_A Putative potassium chan 96.8 0.01 3.6E-07 54.8 11.5 93 363-498 2-95 (153)
35 1lu9_A Methylene tetrahydromet 96.7 0.0039 1.3E-07 64.2 9.0 80 362-483 117-197 (287)
36 3c85_A Putative glutathione-re 96.7 0.0063 2.2E-07 57.8 9.8 92 361-499 36-130 (183)
37 3fbt_A Chorismate mutase and s 96.7 0.0016 5.3E-08 67.9 5.9 35 362-396 120-154 (282)
38 3dfz_A SIRC, precorrin-2 dehyd 96.7 0.0016 5.3E-08 65.7 5.6 92 361-503 28-119 (223)
39 3don_A Shikimate dehydrogenase 96.7 0.00096 3.3E-08 69.3 4.1 37 361-397 114-150 (277)
40 2axq_A Saccharopine dehydrogen 96.5 0.0065 2.2E-07 67.4 9.7 38 360-397 19-56 (467)
41 1gpj_A Glutamyl-tRNA reductase 96.5 0.0059 2E-07 66.3 8.9 35 362-396 165-199 (404)
42 3phh_A Shikimate dehydrogenase 96.5 0.012 4E-07 60.9 10.7 105 364-505 118-230 (269)
43 3u62_A Shikimate dehydrogenase 96.5 0.0013 4.3E-08 67.4 3.4 34 362-396 107-140 (253)
44 3fwz_A Inner membrane protein 96.3 0.037 1.2E-06 50.5 12.1 88 364-498 7-95 (140)
45 3e8x_A Putative NAD-dependent 96.3 0.014 4.7E-07 57.3 9.9 39 357-396 14-53 (236)
46 3l4b_C TRKA K+ channel protien 96.3 0.018 6.3E-07 56.3 10.7 90 366-501 2-93 (218)
47 3rku_A Oxidoreductase YMR226C; 96.3 0.021 7.2E-07 58.7 11.4 87 359-483 28-124 (287)
48 3d1l_A Putative NADP oxidoredu 96.2 0.012 4E-07 59.4 8.5 92 363-506 9-102 (266)
49 1ff9_A Saccharopine reductase; 96.1 0.011 3.7E-07 65.2 8.8 35 363-398 2-36 (450)
50 3qsg_A NAD-binding phosphogluc 96.1 0.028 9.6E-07 58.6 11.3 35 363-397 23-57 (312)
51 1pjc_A Protein (L-alanine dehy 96.1 0.017 5.7E-07 61.7 9.6 35 361-396 164-198 (361)
52 2hk9_A Shikimate dehydrogenase 96.0 0.0047 1.6E-07 63.4 4.9 34 362-396 127-160 (275)
53 1jay_A Coenzyme F420H2:NADP+ o 96.0 0.029 9.9E-07 54.3 10.2 97 366-509 2-100 (212)
54 2gn4_A FLAA1 protein, UDP-GLCN 96.0 0.023 7.9E-07 59.6 9.9 82 360-483 17-100 (344)
55 2ph5_A Homospermidine synthase 96.0 0.027 9.1E-07 62.7 10.7 99 364-507 13-115 (480)
56 1nyt_A Shikimate 5-dehydrogena 95.9 0.012 4.1E-07 60.2 7.3 34 362-396 117-150 (271)
57 3tri_A Pyrroline-5-carboxylate 95.9 0.026 8.8E-07 58.1 9.6 92 363-506 2-98 (280)
58 3dtt_A NADP oxidoreductase; st 95.9 0.026 8.9E-07 56.6 9.4 111 360-509 15-127 (245)
59 3t4x_A Oxidoreductase, short c 95.9 0.034 1.2E-06 56.0 10.3 84 361-483 7-94 (267)
60 1xg5_A ARPG836; short chain de 95.8 0.056 1.9E-06 54.5 11.8 85 360-483 28-120 (279)
61 1p77_A Shikimate 5-dehydrogena 95.8 0.014 4.6E-07 59.9 7.0 34 362-396 117-150 (272)
62 3ruf_A WBGU; rossmann fold, UD 95.8 0.093 3.2E-06 54.2 13.5 84 360-484 21-110 (351)
63 1vl6_A Malate oxidoreductase; 95.8 0.015 5E-07 63.1 7.4 37 361-397 189-225 (388)
64 1hdo_A Biliverdin IX beta redu 95.7 0.088 3E-06 49.6 12.0 33 364-397 3-36 (206)
65 3gvi_A Malate dehydrogenase; N 95.7 0.026 8.9E-07 59.8 9.0 37 360-396 3-39 (324)
66 3nyw_A Putative oxidoreductase 95.7 0.034 1.2E-06 55.7 9.5 63 361-446 4-68 (250)
67 3gt0_A Pyrroline-5-carboxylate 95.7 0.018 6.3E-07 57.6 7.4 89 365-505 3-96 (247)
68 2eez_A Alanine dehydrogenase; 95.6 0.029 1E-06 60.0 9.2 36 360-396 162-197 (369)
69 3o38_A Short chain dehydrogena 95.6 0.038 1.3E-06 55.3 9.4 62 361-446 19-82 (266)
70 1kyq_A Met8P, siroheme biosynt 95.6 0.021 7.2E-07 59.2 7.6 37 361-398 10-46 (274)
71 3lf2_A Short chain oxidoreduct 95.5 0.036 1.2E-06 55.8 9.0 91 361-483 5-96 (265)
72 1sby_A Alcohol dehydrogenase; 95.5 0.089 3E-06 52.2 11.7 35 362-396 3-38 (254)
73 1iy8_A Levodione reductase; ox 95.5 0.066 2.3E-06 53.7 10.9 84 361-483 10-101 (267)
74 2aef_A Calcium-gated potassium 95.5 0.044 1.5E-06 54.1 9.4 88 364-500 9-97 (234)
75 1x7d_A Ornithine cyclodeaminas 95.5 0.033 1.1E-06 59.4 9.0 77 363-485 128-205 (350)
76 2vhw_A Alanine dehydrogenase; 95.5 0.027 9.3E-07 60.5 8.4 36 360-396 164-199 (377)
77 3nzo_A UDP-N-acetylglucosamine 95.5 0.059 2E-06 57.9 11.0 86 360-483 31-121 (399)
78 2z1n_A Dehydrogenase; reductas 95.5 0.073 2.5E-06 53.2 11.0 34 362-396 5-39 (260)
79 1npy_A Hypothetical shikimate 95.5 0.036 1.2E-06 57.1 8.9 34 363-396 118-151 (271)
80 2rir_A Dipicolinate synthase, 95.5 0.034 1.2E-06 57.5 8.7 35 361-396 154-188 (300)
81 1y1p_A ARII, aldehyde reductas 95.4 0.04 1.4E-06 56.4 8.7 82 362-483 9-92 (342)
82 3qiv_A Short-chain dehydrogena 95.4 0.082 2.8E-06 52.4 10.8 82 361-483 6-95 (253)
83 3d4o_A Dipicolinate synthase s 95.3 0.053 1.8E-06 56.0 9.6 35 361-396 152-186 (293)
84 1pjq_A CYSG, siroheme synthase 95.3 0.044 1.5E-06 60.5 9.5 92 361-502 9-100 (457)
85 3pp8_A Glyoxylate/hydroxypyruv 95.3 0.02 6.7E-07 60.4 6.4 91 360-506 135-229 (315)
86 3i1j_A Oxidoreductase, short c 95.3 0.068 2.3E-06 52.7 9.9 61 360-443 10-72 (247)
87 1fmc_A 7 alpha-hydroxysteroid 95.3 0.065 2.2E-06 52.8 9.8 35 361-396 8-43 (255)
88 4e12_A Diketoreductase; oxidor 95.3 0.046 1.6E-06 56.0 8.8 32 365-397 5-36 (283)
89 2raf_A Putative dinucleotide-b 95.3 0.053 1.8E-06 53.1 8.9 37 360-397 15-51 (209)
90 2h78_A Hibadh, 3-hydroxyisobut 95.2 0.034 1.2E-06 57.1 7.8 32 365-397 4-35 (302)
91 3afn_B Carbonyl reductase; alp 95.2 0.093 3.2E-06 51.6 10.7 35 361-396 4-39 (258)
92 2ew2_A 2-dehydropantoate 2-red 95.2 0.042 1.4E-06 56.0 8.3 31 365-396 4-34 (316)
93 3evt_A Phosphoglycerate dehydr 95.2 0.032 1.1E-06 59.1 7.5 37 359-396 132-168 (324)
94 1xu9_A Corticosteroid 11-beta- 95.2 0.098 3.4E-06 53.0 10.9 38 358-396 22-60 (286)
95 3awd_A GOX2181, putative polyo 95.2 0.099 3.4E-06 51.7 10.6 35 361-396 10-45 (260)
96 3doj_A AT3G25530, dehydrogenas 95.2 0.031 1.1E-06 58.1 7.2 37 360-397 17-53 (310)
97 3cky_A 2-hydroxymethyl glutara 95.1 0.04 1.4E-06 56.3 7.9 32 364-396 4-35 (301)
98 2izz_A Pyrroline-5-carboxylate 95.1 0.11 3.7E-06 54.3 11.3 33 364-396 22-57 (322)
99 3gvx_A Glycerate dehydrogenase 95.1 0.022 7.5E-07 59.4 5.8 36 360-396 118-153 (290)
100 3o26_A Salutaridine reductase; 95.1 0.076 2.6E-06 53.7 9.7 91 361-484 9-101 (311)
101 3p7m_A Malate dehydrogenase; p 95.0 0.052 1.8E-06 57.3 8.6 36 362-397 3-38 (321)
102 3ai3_A NADPH-sorbose reductase 95.0 0.096 3.3E-06 52.3 10.3 34 362-396 5-39 (263)
103 1bg6_A N-(1-D-carboxylethyl)-L 95.0 0.083 2.8E-06 55.0 10.1 31 365-396 5-35 (359)
104 3pef_A 6-phosphogluconate dehy 95.0 0.054 1.8E-06 55.3 8.5 32 365-397 2-33 (287)
105 3ioy_A Short-chain dehydrogena 95.0 0.062 2.1E-06 56.0 9.1 63 361-446 5-68 (319)
106 3r6d_A NAD-dependent epimerase 94.9 0.16 5.6E-06 49.0 11.3 95 365-505 6-106 (221)
107 2i99_A MU-crystallin homolog; 94.9 0.036 1.2E-06 57.9 7.0 35 362-396 133-168 (312)
108 3dhn_A NAD-dependent epimerase 94.9 0.14 4.9E-06 49.3 10.8 32 365-397 5-37 (227)
109 3pqe_A L-LDH, L-lactate dehydr 94.9 0.055 1.9E-06 57.3 8.4 33 364-396 5-38 (326)
110 3vku_A L-LDH, L-lactate dehydr 94.9 0.063 2.2E-06 56.9 8.8 34 363-396 8-42 (326)
111 2ahr_A Putative pyrroline carb 94.9 0.048 1.6E-06 54.6 7.6 31 365-396 4-34 (259)
112 2gas_A Isoflavone reductase; N 94.9 0.2 6.8E-06 50.6 12.2 97 364-499 2-103 (307)
113 1omo_A Alanine dehydrogenase; 94.9 0.077 2.6E-06 55.8 9.4 74 363-485 124-198 (322)
114 3i6i_A Putative leucoanthocyan 94.9 0.12 4.1E-06 53.6 10.7 102 362-503 8-115 (346)
115 2z1m_A GDP-D-mannose dehydrata 94.8 0.095 3.3E-06 53.6 9.8 34 362-396 1-35 (345)
116 4egb_A DTDP-glucose 4,6-dehydr 94.8 0.032 1.1E-06 57.6 6.2 35 362-396 22-58 (346)
117 3rkr_A Short chain oxidoreduct 94.8 0.098 3.3E-06 52.4 9.6 83 360-483 25-115 (262)
118 1yxm_A Pecra, peroxisomal tran 94.8 0.13 4.5E-06 52.3 10.6 36 360-396 14-50 (303)
119 3k96_A Glycerol-3-phosphate de 94.8 0.059 2E-06 57.6 8.3 103 364-508 29-135 (356)
120 1w6u_A 2,4-dienoyl-COA reducta 94.7 0.088 3E-06 53.5 9.1 37 359-396 21-58 (302)
121 3uve_A Carveol dehydrogenase ( 94.7 0.22 7.4E-06 50.5 12.0 98 361-483 8-113 (286)
122 2gf2_A Hibadh, 3-hydroxyisobut 94.7 0.036 1.2E-06 56.5 6.2 30 366-396 2-31 (296)
123 1np3_A Ketol-acid reductoisome 94.7 0.14 4.9E-06 54.0 10.9 38 358-396 10-47 (338)
124 3l6d_A Putative oxidoreductase 94.7 0.087 3E-06 54.6 9.2 33 363-396 8-40 (306)
125 3pk0_A Short-chain dehydrogena 94.7 0.11 3.9E-06 52.1 9.8 62 361-446 7-69 (262)
126 2gdz_A NAD+-dependent 15-hydro 94.7 0.089 3.1E-06 52.7 8.9 34 362-396 5-39 (267)
127 4huj_A Uncharacterized protein 94.7 0.062 2.1E-06 53.0 7.5 93 364-509 23-116 (220)
128 4dgs_A Dehydrogenase; structur 94.7 0.06 2E-06 57.4 7.9 90 360-508 167-260 (340)
129 1sb8_A WBPP; epimerase, 4-epim 94.6 0.27 9.2E-06 50.9 12.8 86 361-483 24-111 (352)
130 1pzg_A LDH, lactate dehydrogen 94.6 0.14 4.6E-06 54.2 10.5 33 365-397 10-42 (331)
131 3qvo_A NMRA family protein; st 94.6 0.27 9.1E-06 48.2 12.0 95 364-505 23-123 (236)
132 3fi9_A Malate dehydrogenase; s 94.6 0.073 2.5E-06 56.8 8.4 35 362-396 6-42 (343)
133 3qlj_A Short chain dehydrogena 94.6 0.17 5.8E-06 52.4 11.0 93 360-483 23-123 (322)
134 3r1i_A Short-chain type dehydr 94.6 0.18 6.3E-06 51.1 11.0 36 360-396 28-64 (276)
135 4fs3_A Enoyl-[acyl-carrier-pro 94.5 0.088 3E-06 53.0 8.5 89 361-482 3-94 (256)
136 1qyc_A Phenylcoumaran benzylic 94.5 0.18 6.1E-06 50.9 10.9 97 364-499 4-104 (308)
137 3gpi_A NAD-dependent epimerase 94.5 0.13 4.6E-06 51.6 9.9 33 363-396 2-34 (286)
138 2vns_A Metalloreductase steap3 94.5 0.062 2.1E-06 52.8 7.2 32 364-396 28-59 (215)
139 2ewd_A Lactate dehydrogenase,; 94.5 0.077 2.6E-06 55.4 8.3 34 364-397 4-37 (317)
140 3rwb_A TPLDH, pyridoxal 4-dehy 94.5 0.11 3.8E-06 51.7 9.1 36 360-396 2-38 (247)
141 3pgx_A Carveol dehydrogenase; 94.5 0.27 9.3E-06 49.6 12.1 96 360-483 11-114 (280)
142 3svt_A Short-chain type dehydr 94.5 0.21 7.1E-06 50.6 11.1 63 361-446 8-72 (281)
143 4g65_A TRK system potassium up 94.5 0.21 7E-06 55.2 11.9 98 362-505 233-331 (461)
144 3imf_A Short chain dehydrogena 94.5 0.085 2.9E-06 52.8 8.1 35 361-396 3-38 (257)
145 4fc7_A Peroxisomal 2,4-dienoyl 94.4 0.13 4.5E-06 52.0 9.6 37 359-396 22-59 (277)
146 3tjr_A Short chain dehydrogena 94.4 0.15 5.2E-06 52.4 10.2 82 361-483 28-117 (301)
147 2cvz_A Dehydrogenase, 3-hydrox 94.4 0.1 3.5E-06 52.7 8.8 30 365-396 2-31 (289)
148 2zyd_A 6-phosphogluconate dehy 94.4 0.12 4E-06 57.5 9.8 37 360-397 11-47 (480)
149 3hdj_A Probable ornithine cycl 94.4 0.064 2.2E-06 56.4 7.4 74 363-485 120-194 (313)
150 1ldn_A L-lactate dehydrogenase 94.4 0.11 3.8E-06 54.4 9.2 33 364-396 6-39 (316)
151 3h7a_A Short chain dehydrogena 94.4 0.17 5.9E-06 50.5 10.2 34 362-396 5-39 (252)
152 3dqp_A Oxidoreductase YLBE; al 94.4 0.24 8.1E-06 47.7 11.0 91 366-505 2-104 (219)
153 2zat_A Dehydrogenase/reductase 94.4 0.16 5.4E-06 50.7 10.0 35 361-396 11-46 (260)
154 2jah_A Clavulanic acid dehydro 94.4 0.21 7.1E-06 49.6 10.8 35 361-396 4-39 (247)
155 2g5c_A Prephenate dehydrogenas 94.4 0.14 4.6E-06 51.9 9.5 32 365-396 2-34 (281)
156 2pzm_A Putative nucleotide sug 94.4 0.24 8E-06 51.0 11.5 38 359-397 15-53 (330)
157 4id9_A Short-chain dehydrogena 94.4 0.24 8.1E-06 51.1 11.5 39 358-397 13-52 (347)
158 1z82_A Glycerol-3-phosphate de 94.4 0.033 1.1E-06 58.3 5.0 32 364-396 14-45 (335)
159 3l9w_A Glutathione-regulated p 94.4 0.1 3.5E-06 56.8 9.1 90 364-500 4-94 (413)
160 2pnf_A 3-oxoacyl-[acyl-carrier 94.3 0.13 4.4E-06 50.4 9.0 34 362-396 5-39 (248)
161 3tfo_A Putative 3-oxoacyl-(acy 94.3 0.15 5.1E-06 51.7 9.7 88 362-483 2-90 (264)
162 1hyh_A L-hicdh, L-2-hydroxyiso 94.3 0.2 6.9E-06 51.9 10.9 32 365-396 2-34 (309)
163 2bd0_A Sepiapterin reductase; 94.3 0.22 7.4E-06 48.8 10.6 33 364-396 2-41 (244)
164 2c07_A 3-oxoacyl-(acyl-carrier 94.3 0.12 4E-06 52.5 8.8 36 360-396 40-76 (285)
165 2ae2_A Protein (tropinone redu 94.3 0.25 8.7E-06 49.2 11.2 34 362-396 7-41 (260)
166 1qyd_A Pinoresinol-lariciresin 94.3 0.23 8E-06 50.2 11.1 102 364-504 4-114 (313)
167 3slg_A PBGP3 protein; structur 94.3 0.12 4.1E-06 53.9 9.2 39 358-397 18-58 (372)
168 1vpd_A Tartronate semialdehyde 94.3 0.096 3.3E-06 53.4 8.2 31 365-396 6-36 (299)
169 3ucx_A Short chain dehydrogena 94.3 0.19 6.4E-06 50.5 10.2 61 361-446 8-69 (264)
170 3lyl_A 3-oxoacyl-(acyl-carrier 94.3 0.13 4.5E-06 50.7 8.9 34 362-396 3-37 (247)
171 2dbq_A Glyoxylate reductase; D 94.2 0.052 1.8E-06 57.4 6.3 36 360-396 146-181 (334)
172 1p9l_A Dihydrodipicolinate red 94.2 0.13 4.3E-06 52.4 8.8 31 366-396 2-34 (245)
173 3tl2_A Malate dehydrogenase; c 94.2 0.1 3.5E-06 54.9 8.4 35 363-397 7-41 (315)
174 1hdc_A 3-alpha, 20 beta-hydrox 94.2 0.12 3.9E-06 51.7 8.4 35 361-396 2-37 (254)
175 2pd6_A Estradiol 17-beta-dehyd 94.2 0.081 2.8E-06 52.4 7.2 36 361-397 4-40 (264)
176 1oaa_A Sepiapterin reductase; 94.2 0.12 4.2E-06 51.4 8.6 63 361-446 3-69 (259)
177 3ggo_A Prephenate dehydrogenas 94.2 0.14 4.9E-06 53.5 9.4 33 364-396 33-66 (314)
178 2f1k_A Prephenate dehydrogenas 94.1 0.14 4.8E-06 51.6 9.0 30 366-396 2-31 (279)
179 2o23_A HADH2 protein; HSD17B10 94.1 0.22 7.5E-06 49.3 10.3 34 362-396 10-44 (265)
180 3tsc_A Putative oxidoreductase 94.1 0.21 7.2E-06 50.4 10.3 95 361-483 8-110 (277)
181 1spx_A Short-chain reductase f 94.1 0.17 5.9E-06 50.8 9.6 35 361-396 3-38 (278)
182 3ce6_A Adenosylhomocysteinase; 94.1 0.082 2.8E-06 59.1 7.8 35 361-396 271-305 (494)
183 3rih_A Short chain dehydrogena 94.1 0.085 2.9E-06 54.3 7.4 36 361-397 38-74 (293)
184 3c24_A Putative oxidoreductase 94.1 0.11 3.9E-06 52.8 8.3 86 365-505 12-100 (286)
185 3pxx_A Carveol dehydrogenase; 94.1 0.33 1.1E-05 48.8 11.6 95 360-483 6-108 (287)
186 3v8b_A Putative dehydrogenase, 94.1 0.22 7.6E-06 50.7 10.4 35 361-396 25-60 (283)
187 2iz1_A 6-phosphogluconate dehy 94.1 0.2 7E-06 55.3 10.8 32 364-396 5-36 (474)
188 3l77_A Short-chain alcohol deh 94.0 0.2 6.9E-06 48.9 9.7 32 364-396 2-34 (235)
189 1x0v_A GPD-C, GPDH-C, glycerol 94.0 0.17 5.7E-06 53.0 9.6 106 365-506 9-124 (354)
190 3gaf_A 7-alpha-hydroxysteroid 94.0 0.15 5.3E-06 50.9 9.0 61 361-446 9-70 (256)
191 4e6p_A Probable sorbitol dehyd 94.0 0.22 7.6E-06 49.7 10.2 35 361-396 5-40 (259)
192 4egf_A L-xylulose reductase; s 94.0 0.14 4.9E-06 51.5 8.7 91 360-483 16-107 (266)
193 2hq1_A Glucose/ribitol dehydro 94.0 0.27 9.2E-06 48.1 10.6 33 362-395 3-36 (247)
194 3pdu_A 3-hydroxyisobutyrate de 94.0 0.11 3.9E-06 52.9 8.0 32 365-397 2-33 (287)
195 1yqg_A Pyrroline-5-carboxylate 94.0 0.059 2E-06 53.9 5.8 31 366-396 2-32 (263)
196 3i83_A 2-dehydropantoate 2-red 94.0 0.063 2.2E-06 55.9 6.2 33 365-398 3-35 (320)
197 1ae1_A Tropinone reductase-I; 94.0 0.27 9.3E-06 49.5 10.8 34 362-396 19-53 (273)
198 1zem_A Xylitol dehydrogenase; 94.0 0.23 7.9E-06 49.7 10.1 35 361-396 4-39 (262)
199 1oju_A MDH, malate dehydrogena 94.0 0.15 5.3E-06 53.0 9.1 31 366-396 2-33 (294)
200 3tzq_B Short-chain type dehydr 94.0 0.2 6.8E-06 50.5 9.7 36 361-397 8-44 (271)
201 1yb1_A 17-beta-hydroxysteroid 94.0 0.27 9.1E-06 49.5 10.7 35 361-396 28-63 (272)
202 3ftp_A 3-oxoacyl-[acyl-carrier 94.0 0.2 6.8E-06 50.7 9.7 36 360-396 24-60 (270)
203 3sju_A Keto reductase; short-c 94.0 0.21 7.3E-06 50.6 10.0 62 360-446 20-82 (279)
204 3enk_A UDP-glucose 4-epimerase 94.0 0.32 1.1E-05 49.9 11.4 32 364-396 5-37 (341)
205 1t2d_A LDH-P, L-lactate dehydr 93.9 0.17 5.7E-06 53.3 9.4 33 365-397 5-37 (322)
206 2d4a_B Malate dehydrogenase; a 93.9 0.17 5.9E-06 52.9 9.4 32 366-397 1-32 (308)
207 2a9f_A Putative malic enzyme ( 93.9 0.054 1.8E-06 58.9 5.6 40 360-399 184-223 (398)
208 1xq1_A Putative tropinone redu 93.9 0.24 8.1E-06 49.3 10.0 34 362-396 12-46 (266)
209 2bgk_A Rhizome secoisolaricire 93.9 0.23 8E-06 49.5 10.0 36 360-396 12-48 (278)
210 2hjr_A Malate dehydrogenase; m 93.8 0.12 4.2E-06 54.4 8.2 34 364-397 14-47 (328)
211 3rd5_A Mypaa.01249.C; ssgcid, 93.8 0.16 5.4E-06 51.7 8.8 37 360-397 12-49 (291)
212 3f1l_A Uncharacterized oxidore 93.8 0.25 8.7E-06 49.1 10.1 36 360-396 8-44 (252)
213 4g65_A TRK system potassium up 93.8 0.12 4.2E-06 57.0 8.4 91 365-501 4-96 (461)
214 3tox_A Short chain dehydrogena 93.8 0.12 4.1E-06 52.8 7.7 35 361-396 5-40 (280)
215 3sc4_A Short chain dehydrogena 93.8 0.41 1.4E-05 48.7 11.7 88 362-483 7-102 (285)
216 4imr_A 3-oxoacyl-(acyl-carrier 93.8 0.22 7.4E-06 50.6 9.6 36 360-396 29-65 (275)
217 1vl8_A Gluconate 5-dehydrogena 93.8 0.3 1E-05 49.2 10.6 37 359-396 16-53 (267)
218 1wma_A Carbonyl reductase [NAD 93.8 0.16 5.3E-06 50.2 8.4 33 363-396 3-37 (276)
219 2v6b_A L-LDH, L-lactate dehydr 93.8 0.18 6.2E-06 52.4 9.2 33 365-397 1-34 (304)
220 4e21_A 6-phosphogluconate dehy 93.7 0.16 5.4E-06 54.4 8.9 119 362-506 20-140 (358)
221 2uyy_A N-PAC protein; long-cha 93.7 0.087 3E-06 54.4 6.7 31 365-396 31-61 (316)
222 2b4q_A Rhamnolipids biosynthes 93.7 0.19 6.6E-06 50.9 9.2 34 362-396 27-61 (276)
223 4dll_A 2-hydroxy-3-oxopropiona 93.7 0.079 2.7E-06 55.3 6.4 36 361-397 28-63 (320)
224 3hwr_A 2-dehydropantoate 2-red 93.7 0.17 5.9E-06 52.6 8.9 31 363-394 18-48 (318)
225 4ibo_A Gluconate dehydrogenase 93.7 0.12 4.3E-06 52.3 7.6 35 361-396 23-58 (271)
226 1yj8_A Glycerol-3-phosphate de 93.7 0.095 3.2E-06 55.7 7.0 108 365-508 22-143 (375)
227 2pgd_A 6-phosphogluconate dehy 93.7 0.29 9.9E-06 54.2 11.1 32 365-397 3-34 (482)
228 3jtm_A Formate dehydrogenase, 93.7 0.055 1.9E-06 57.9 5.1 35 361-396 161-195 (351)
229 4ezb_A Uncharacterized conserv 93.6 0.37 1.3E-05 50.2 11.2 34 364-397 24-57 (317)
230 4da9_A Short-chain dehydrogena 93.6 0.39 1.3E-05 48.8 11.1 91 361-484 26-117 (280)
231 4dry_A 3-oxoacyl-[acyl-carrier 93.5 0.17 5.9E-06 51.5 8.4 36 360-396 29-65 (281)
232 1pgj_A 6PGDH, 6-PGDH, 6-phosph 93.5 0.29 1E-05 54.2 10.9 31 366-397 3-33 (478)
233 3ba1_A HPPR, hydroxyphenylpyru 93.5 0.091 3.1E-06 55.7 6.4 36 360-396 160-195 (333)
234 1sny_A Sniffer CG10964-PA; alp 93.5 0.22 7.4E-06 49.5 8.8 40 358-397 15-57 (267)
235 2r6j_A Eugenol synthase 1; phe 93.5 0.42 1.4E-05 48.7 11.2 91 365-499 12-106 (318)
236 3n74_A 3-ketoacyl-(acyl-carrie 93.4 0.29 9.8E-06 48.6 9.7 35 361-396 6-41 (261)
237 4iiu_A 3-oxoacyl-[acyl-carrier 93.4 0.22 7.5E-06 49.9 8.9 34 360-393 22-56 (267)
238 3c1o_A Eugenol synthase; pheny 93.4 0.66 2.3E-05 47.2 12.6 96 364-499 4-104 (321)
239 2qq5_A DHRS1, dehydrogenase/re 93.4 0.25 8.4E-06 49.3 9.2 34 362-396 3-37 (260)
240 3sx2_A Putative 3-ketoacyl-(ac 93.4 0.49 1.7E-05 47.5 11.5 95 360-483 9-111 (278)
241 3ius_A Uncharacterized conserv 93.4 0.57 1.9E-05 46.7 11.9 32 364-396 5-36 (286)
242 1evy_A Glycerol-3-phosphate de 93.4 0.17 5.8E-06 53.4 8.3 30 366-396 17-46 (366)
243 2cfc_A 2-(R)-hydroxypropyl-COM 93.4 0.32 1.1E-05 47.7 9.8 32 364-396 2-34 (250)
244 3ew7_A LMO0794 protein; Q8Y8U8 93.3 0.55 1.9E-05 44.7 11.2 30 366-396 2-32 (221)
245 3ksu_A 3-oxoacyl-acyl carrier 93.3 0.23 7.8E-06 49.9 8.8 85 361-483 8-100 (262)
246 2q2v_A Beta-D-hydroxybutyrate 93.3 0.31 1.1E-05 48.4 9.7 34 362-396 2-36 (255)
247 1a5z_A L-lactate dehydrogenase 93.3 0.2 6.9E-06 52.3 8.7 31 366-396 2-33 (319)
248 3rft_A Uronate dehydrogenase; 93.3 0.32 1.1E-05 48.7 9.8 34 363-397 2-36 (267)
249 1nff_A Putative oxidoreductase 93.2 0.37 1.3E-05 48.2 10.2 35 361-396 4-39 (260)
250 2dvm_A Malic enzyme, 439AA lon 93.2 0.06 2.1E-06 59.3 4.6 35 361-395 183-219 (439)
251 1ur5_A Malate dehydrogenase; o 93.2 0.43 1.5E-05 49.7 10.9 33 365-397 3-35 (309)
252 1zk4_A R-specific alcohol dehy 93.2 0.18 6.3E-06 49.5 7.7 35 361-396 3-38 (251)
253 3v2g_A 3-oxoacyl-[acyl-carrier 93.2 0.36 1.2E-05 48.8 10.1 83 361-483 28-118 (271)
254 1guz_A Malate dehydrogenase; o 93.2 0.3 1E-05 50.9 9.7 32 366-397 2-34 (310)
255 1hxh_A 3BETA/17BETA-hydroxyste 93.2 0.18 6.2E-06 50.2 7.7 35 361-396 3-38 (253)
256 2jl1_A Triphenylmethane reduct 93.1 0.27 9.1E-06 49.1 9.0 31 365-396 1-34 (287)
257 3tpc_A Short chain alcohol deh 93.1 0.21 7.3E-06 49.7 8.2 36 361-397 4-40 (257)
258 2pv7_A T-protein [includes: ch 93.1 0.25 8.6E-06 50.9 9.0 33 364-397 21-54 (298)
259 3p2y_A Alanine dehydrogenase/p 93.1 0.088 3E-06 57.0 5.7 37 360-397 180-216 (381)
260 2x0j_A Malate dehydrogenase; o 93.1 0.39 1.3E-05 50.1 10.4 31 366-396 2-33 (294)
261 3m2p_A UDP-N-acetylglucosamine 93.1 0.43 1.5E-05 48.5 10.6 32 365-397 3-35 (311)
262 4dqx_A Probable oxidoreductase 93.1 0.37 1.3E-05 48.9 10.1 35 361-396 24-59 (277)
263 1dih_A Dihydrodipicolinate red 93.1 0.16 5.6E-06 52.2 7.5 40 469-509 67-106 (273)
264 3m6i_A L-arabinitol 4-dehydrog 93.1 0.58 2E-05 49.1 11.9 34 363-396 179-212 (363)
265 3d0o_A L-LDH 1, L-lactate dehy 93.1 0.26 8.9E-06 51.6 9.1 36 361-396 3-39 (317)
266 1geg_A Acetoin reductase; SDR 93.1 0.48 1.6E-05 47.1 10.7 32 364-396 2-34 (256)
267 3sxp_A ADP-L-glycero-D-mannohe 93.1 0.84 2.9E-05 47.4 13.0 36 361-397 7-45 (362)
268 3kvo_A Hydroxysteroid dehydrog 93.1 0.54 1.8E-05 49.7 11.6 97 360-483 41-138 (346)
269 3qha_A Putative oxidoreductase 93.0 0.21 7.1E-06 51.4 8.2 33 364-397 15-47 (296)
270 1xkq_A Short-chain reductase f 93.0 0.33 1.1E-05 49.0 9.5 35 361-396 3-38 (280)
271 3d3w_A L-xylulose reductase; u 93.0 0.26 8.9E-06 48.2 8.5 34 362-396 5-39 (244)
272 2wsb_A Galactitol dehydrogenas 93.0 0.41 1.4E-05 47.0 10.0 34 362-396 9-43 (254)
273 3nep_X Malate dehydrogenase; h 93.0 0.25 8.6E-06 52.0 8.8 31 366-396 2-33 (314)
274 3b1f_A Putative prephenate deh 93.0 0.26 9.1E-06 50.0 8.8 33 364-396 6-39 (290)
275 3e03_A Short chain dehydrogena 93.0 0.75 2.6E-05 46.3 12.1 36 362-398 4-40 (274)
276 3ldh_A Lactate dehydrogenase; 93.0 0.27 9.2E-06 52.2 9.0 34 363-396 20-54 (330)
277 4eso_A Putative oxidoreductase 92.9 0.19 6.6E-06 50.3 7.6 35 361-396 5-40 (255)
278 3ctm_A Carbonyl reductase; alc 92.9 0.32 1.1E-05 48.8 9.2 35 361-396 31-66 (279)
279 1x1t_A D(-)-3-hydroxybutyrate 92.9 0.3 1E-05 48.6 9.0 34 362-396 2-36 (260)
280 2p4q_A 6-phosphogluconate dehy 92.9 0.38 1.3E-05 53.6 10.6 33 364-397 10-42 (497)
281 3grp_A 3-oxoacyl-(acyl carrier 92.9 0.34 1.2E-05 48.9 9.3 36 360-396 23-59 (266)
282 4aj2_A L-lactate dehydrogenase 92.9 0.24 8.1E-06 52.6 8.4 37 360-396 15-52 (331)
283 3oig_A Enoyl-[acyl-carrier-pro 92.8 0.33 1.1E-05 48.4 9.1 34 362-396 5-41 (266)
284 3cxt_A Dehydrogenase with diff 92.8 0.42 1.4E-05 48.9 10.1 35 361-396 31-66 (291)
285 3ppi_A 3-hydroxyacyl-COA dehyd 92.8 0.28 9.7E-06 49.4 8.7 36 360-396 26-62 (281)
286 3gvc_A Oxidoreductase, probabl 92.8 0.27 9.3E-06 50.0 8.6 37 359-396 24-61 (277)
287 2dc1_A L-aspartate dehydrogena 92.8 0.41 1.4E-05 47.4 9.7 32 366-397 2-33 (236)
288 2x9g_A PTR1, pteridine reducta 92.7 0.5 1.7E-05 47.9 10.4 36 360-396 19-55 (288)
289 3v2h_A D-beta-hydroxybutyrate 92.7 0.64 2.2E-05 47.2 11.2 35 361-396 22-57 (281)
290 2rhc_B Actinorhodin polyketide 92.7 0.57 1.9E-05 47.3 10.8 35 361-396 19-54 (277)
291 2bka_A CC3, TAT-interacting pr 92.7 0.27 9.3E-06 47.8 8.1 36 362-397 16-53 (242)
292 4dqv_A Probable peptide synthe 92.7 0.93 3.2E-05 49.6 13.3 37 361-397 70-109 (478)
293 3q2i_A Dehydrogenase; rossmann 92.7 0.32 1.1E-05 51.0 9.2 88 364-504 13-104 (354)
294 1txg_A Glycerol-3-phosphate de 92.7 0.23 7.7E-06 51.3 7.9 30 366-396 2-31 (335)
295 4dyv_A Short-chain dehydrogena 92.7 0.32 1.1E-05 49.3 8.9 36 360-396 24-60 (272)
296 3ijr_A Oxidoreductase, short c 92.7 0.69 2.4E-05 47.2 11.4 36 360-396 43-79 (291)
297 1cyd_A Carbonyl reductase; sho 92.6 0.49 1.7E-05 46.1 9.9 34 362-396 5-39 (244)
298 3osu_A 3-oxoacyl-[acyl-carrier 92.6 0.38 1.3E-05 47.6 9.2 34 362-396 2-36 (246)
299 4gwg_A 6-phosphogluconate dehy 92.6 0.47 1.6E-05 52.8 10.8 122 364-506 4-128 (484)
300 3edm_A Short chain dehydrogena 92.6 0.44 1.5E-05 47.7 9.6 34 360-394 4-38 (259)
301 1ez4_A Lactate dehydrogenase; 92.6 0.34 1.2E-05 50.9 9.1 33 364-396 5-38 (318)
302 3s55_A Putative short-chain de 92.6 0.79 2.7E-05 46.1 11.6 37 360-397 6-43 (281)
303 1rkx_A CDP-glucose-4,6-dehydra 92.6 0.17 5.7E-06 52.5 6.7 37 360-397 5-42 (357)
304 1yde_A Retinal dehydrogenase/r 92.5 0.43 1.5E-05 48.1 9.6 35 361-396 6-41 (270)
305 1ek6_A UDP-galactose 4-epimera 92.5 0.48 1.6E-05 48.6 10.1 33 364-397 2-35 (348)
306 3gg2_A Sugar dehydrogenase, UD 92.5 0.36 1.2E-05 53.1 9.6 33 365-398 3-35 (450)
307 3ip1_A Alcohol dehydrogenase, 92.5 0.43 1.5E-05 51.1 10.1 34 363-396 213-246 (404)
308 3uf0_A Short-chain dehydrogena 92.5 0.82 2.8E-05 46.2 11.6 36 360-396 27-63 (273)
309 2a4k_A 3-oxoacyl-[acyl carrier 92.5 0.22 7.6E-06 50.1 7.3 35 361-396 3-38 (263)
310 3uuw_A Putative oxidoreductase 92.5 0.27 9.4E-06 50.5 8.1 90 362-504 4-95 (308)
311 1gee_A Glucose 1-dehydrogenase 92.5 0.65 2.2E-05 45.8 10.7 35 361-396 4-39 (261)
312 3kkj_A Amine oxidase, flavin-c 92.5 0.12 4.1E-06 48.4 4.9 32 365-397 3-34 (336)
313 3ak4_A NADH-dependent quinucli 92.4 0.3 1E-05 48.7 8.1 36 361-397 9-45 (263)
314 1yb4_A Tartronic semialdehyde 92.4 0.098 3.4E-06 53.1 4.6 30 365-395 4-33 (295)
315 4fgw_A Glycerol-3-phosphate de 92.4 0.12 4.2E-06 56.0 5.6 112 365-510 35-155 (391)
316 1edz_A 5,10-methylenetetrahydr 92.4 0.16 5.6E-06 53.7 6.4 38 361-399 174-212 (320)
317 1yo6_A Putative carbonyl reduc 92.4 0.23 7.9E-06 48.3 7.1 35 363-397 2-38 (250)
318 3l6e_A Oxidoreductase, short-c 92.4 0.59 2E-05 46.1 10.2 33 363-396 2-35 (235)
319 1xhl_A Short-chain dehydrogena 92.4 0.44 1.5E-05 48.9 9.5 34 362-396 24-58 (297)
320 4iin_A 3-ketoacyl-acyl carrier 92.4 0.36 1.2E-05 48.5 8.7 35 361-396 26-61 (271)
321 2p91_A Enoyl-[acyl-carrier-pro 92.3 0.4 1.4E-05 48.5 9.1 35 361-396 18-55 (285)
322 3op4_A 3-oxoacyl-[acyl-carrier 92.3 0.44 1.5E-05 47.3 9.2 35 361-396 6-41 (248)
323 1mld_A Malate dehydrogenase; o 92.3 0.55 1.9E-05 49.1 10.3 33 366-398 2-36 (314)
324 1qsg_A Enoyl-[acyl-carrier-pro 92.3 0.35 1.2E-05 48.3 8.6 35 362-397 7-44 (265)
325 3k31_A Enoyl-(acyl-carrier-pro 92.3 0.58 2E-05 47.8 10.3 35 361-396 27-64 (296)
326 2d1y_A Hypothetical protein TT 92.2 0.64 2.2E-05 46.2 10.3 36 361-397 3-39 (256)
327 1edo_A Beta-keto acyl carrier 92.2 0.57 1.9E-05 45.7 9.8 28 364-391 1-29 (244)
328 2x4g_A Nucleoside-diphosphate- 92.2 0.85 2.9E-05 46.6 11.5 32 365-397 14-46 (342)
329 3e48_A Putative nucleoside-dip 92.2 1 3.5E-05 45.0 11.9 31 366-396 2-33 (289)
330 1h5q_A NADP-dependent mannitol 92.2 0.35 1.2E-05 47.7 8.2 34 362-396 12-46 (265)
331 2zqz_A L-LDH, L-lactate dehydr 92.2 0.4 1.4E-05 50.6 9.1 34 363-396 8-42 (326)
332 4fn4_A Short chain dehydrogena 92.2 0.46 1.6E-05 48.4 9.2 88 361-482 4-92 (254)
333 3oid_A Enoyl-[acyl-carrier-pro 92.2 0.31 1.1E-05 48.8 7.9 60 363-446 3-63 (258)
334 2wyu_A Enoyl-[acyl carrier pro 92.2 0.43 1.5E-05 47.6 9.0 35 361-396 5-42 (261)
335 2nwq_A Probable short-chain de 92.1 0.38 1.3E-05 48.7 8.6 35 360-396 18-53 (272)
336 3oec_A Carveol dehydrogenase ( 92.1 0.81 2.8E-05 47.3 11.3 95 360-483 42-144 (317)
337 4dmm_A 3-oxoacyl-[acyl-carrier 92.1 0.47 1.6E-05 47.8 9.3 35 361-396 25-60 (269)
338 3fr7_A Putative ketol-acid red 92.1 0.41 1.4E-05 53.5 9.3 28 359-386 48-76 (525)
339 3t7c_A Carveol dehydrogenase; 92.1 0.93 3.2E-05 46.3 11.5 95 360-483 24-126 (299)
340 2d5c_A AROE, shikimate 5-dehyd 92.0 0.12 4.3E-06 52.1 4.8 34 361-396 114-147 (263)
341 1lnq_A MTHK channels, potassiu 92.0 0.36 1.2E-05 50.3 8.5 88 364-500 115-203 (336)
342 1pl8_A Human sorbitol dehydrog 92.0 0.63 2.2E-05 48.8 10.4 34 363-396 171-204 (356)
343 1orr_A CDP-tyvelose-2-epimeras 92.0 1.2 4.1E-05 45.4 12.3 31 365-396 2-33 (347)
344 3rc1_A Sugar 3-ketoreductase; 92.0 0.48 1.7E-05 49.8 9.5 90 362-504 25-118 (350)
345 3euw_A MYO-inositol dehydrogen 92.0 0.39 1.3E-05 50.1 8.7 87 365-504 5-94 (344)
346 2wm3_A NMRA-like family domain 91.9 0.7 2.4E-05 46.6 10.3 77 364-484 5-82 (299)
347 3a28_C L-2.3-butanediol dehydr 91.9 0.73 2.5E-05 45.8 10.3 32 364-396 2-34 (258)
348 4f6c_A AUSA reductase domain p 91.9 0.27 9.2E-06 52.7 7.6 35 361-396 66-101 (427)
349 3nrc_A Enoyl-[acyl-carrier-pro 91.9 0.34 1.2E-05 49.0 7.9 38 359-397 21-61 (280)
350 1xq6_A Unknown protein; struct 91.9 0.26 8.8E-06 47.9 6.8 34 363-396 3-38 (253)
351 3icc_A Putative 3-oxoacyl-(acy 91.9 0.52 1.8E-05 46.4 9.1 32 362-394 5-37 (255)
352 3grk_A Enoyl-(acyl-carrier-pro 91.9 0.66 2.3E-05 47.4 10.1 36 360-396 27-65 (293)
353 1nvt_A Shikimate 5'-dehydrogen 91.8 0.1 3.6E-06 53.6 4.0 33 362-396 126-158 (287)
354 2c5a_A GDP-mannose-3', 5'-epim 91.8 1.2 4E-05 46.9 12.3 34 363-397 28-62 (379)
355 3ek2_A Enoyl-(acyl-carrier-pro 91.8 0.37 1.3E-05 47.8 7.9 37 359-396 9-48 (271)
356 3mz0_A Inositol 2-dehydrogenas 91.8 0.51 1.7E-05 49.3 9.3 89 365-504 3-95 (344)
357 3kb6_A D-lactate dehydrogenase 91.8 0.079 2.7E-06 56.2 3.1 92 360-508 137-232 (334)
358 2q1s_A Putative nucleotide sug 91.8 0.5 1.7E-05 49.6 9.3 38 360-397 28-66 (377)
359 1gy8_A UDP-galactose 4-epimera 91.7 1.7 5.9E-05 45.4 13.5 32 365-397 3-36 (397)
360 3c7a_A Octopine dehydrogenase; 91.7 0.64 2.2E-05 49.7 10.2 30 365-395 3-33 (404)
361 4hkt_A Inositol 2-dehydrogenas 91.7 0.7 2.4E-05 47.9 10.2 32 365-396 4-36 (331)
362 1ja9_A 4HNR, 1,3,6,8-tetrahydr 91.6 0.39 1.3E-05 47.7 7.9 35 361-396 18-53 (274)
363 4f3y_A DHPR, dihydrodipicolina 91.6 0.52 1.8E-05 48.5 9.0 100 363-509 6-107 (272)
364 2q1w_A Putative nucleotide sug 91.6 1.4 4.9E-05 45.2 12.4 37 360-397 17-54 (333)
365 4ej6_A Putative zinc-binding d 91.6 0.4 1.4E-05 50.9 8.4 34 363-396 182-215 (370)
366 4e3z_A Putative oxidoreductase 91.5 0.69 2.4E-05 46.3 9.7 60 363-446 25-85 (272)
367 3f9i_A 3-oxoacyl-[acyl-carrier 91.5 0.52 1.8E-05 46.3 8.6 36 360-396 10-46 (249)
368 3ec7_A Putative dehydrogenase; 91.4 0.71 2.4E-05 48.7 10.0 92 362-504 21-116 (357)
369 2zcu_A Uncharacterized oxidore 91.4 0.64 2.2E-05 46.2 9.3 30 366-396 1-33 (286)
370 3db2_A Putative NADPH-dependen 91.4 0.39 1.3E-05 50.4 8.0 88 364-504 5-95 (354)
371 2ixa_A Alpha-N-acetylgalactosa 91.4 0.74 2.5E-05 50.1 10.4 99 362-504 18-120 (444)
372 3un1_A Probable oxidoreductase 91.4 0.61 2.1E-05 46.7 9.1 39 360-399 24-63 (260)
373 1y6j_A L-lactate dehydrogenase 91.3 0.33 1.1E-05 50.9 7.3 34 364-397 7-41 (318)
374 3u5t_A 3-oxoacyl-[acyl-carrier 91.3 0.69 2.4E-05 46.6 9.5 30 362-391 25-55 (267)
375 2glx_A 1,5-anhydro-D-fructose 91.3 0.58 2E-05 48.3 9.1 31 366-396 2-33 (332)
376 3u9l_A 3-oxoacyl-[acyl-carrier 91.3 0.76 2.6E-05 47.9 10.0 86 362-483 3-96 (324)
377 4a2c_A Galactitol-1-phosphate 91.3 0.59 2E-05 48.5 9.2 34 363-396 160-193 (346)
378 2pd4_A Enoyl-[acyl-carrier-pro 91.2 0.52 1.8E-05 47.4 8.4 35 362-397 4-41 (275)
379 1lld_A L-lactate dehydrogenase 91.2 0.21 7.2E-06 51.5 5.5 34 364-397 7-41 (319)
380 3fpc_A NADP-dependent alcohol 91.2 0.26 8.9E-06 51.6 6.3 34 363-396 166-199 (352)
381 3fef_A Putative glucosidase LP 91.2 0.36 1.2E-05 53.3 7.7 94 363-500 4-103 (450)
382 2uvd_A 3-oxoacyl-(acyl-carrier 91.1 0.72 2.5E-05 45.4 9.1 34 362-396 2-36 (246)
383 3m1a_A Putative dehydrogenase; 91.0 0.57 1.9E-05 47.0 8.4 35 362-397 3-38 (281)
384 1vkn_A N-acetyl-gamma-glutamyl 91.0 0.51 1.8E-05 50.5 8.4 92 365-505 14-106 (351)
385 4fgs_A Probable dehydrogenase 90.9 0.35 1.2E-05 49.8 6.9 37 360-397 25-62 (273)
386 3uko_A Alcohol dehydrogenase c 90.9 0.62 2.1E-05 49.3 9.0 34 363-396 193-226 (378)
387 3is3_A 17BETA-hydroxysteroid d 90.9 0.61 2.1E-05 46.8 8.5 36 360-396 14-50 (270)
388 1uls_A Putative 3-oxoacyl-acyl 90.9 0.65 2.2E-05 45.9 8.6 34 362-396 3-37 (245)
389 1z45_A GAL10 bifunctional prot 90.8 0.9 3.1E-05 52.0 10.9 35 361-396 8-43 (699)
390 2xxj_A L-LDH, L-lactate dehydr 90.8 0.45 1.5E-05 49.7 7.7 33 365-397 1-34 (310)
391 1p0f_A NADP-dependent alcohol 90.7 0.74 2.5E-05 48.5 9.4 34 363-396 191-224 (373)
392 3ijp_A DHPR, dihydrodipicolina 90.7 0.61 2.1E-05 48.6 8.5 43 466-509 80-122 (288)
393 2y0c_A BCEC, UDP-glucose dehyd 90.7 0.87 3E-05 50.4 10.2 35 363-398 7-41 (478)
394 1e3j_A NADP(H)-dependent ketos 90.6 1.2 4E-05 46.6 10.7 33 363-396 168-200 (352)
395 3e9m_A Oxidoreductase, GFO/IDH 90.6 0.49 1.7E-05 49.2 7.7 90 363-504 4-96 (330)
396 1f8f_A Benzyl alcohol dehydrog 90.6 0.51 1.7E-05 49.8 7.9 34 363-396 190-223 (371)
397 3gk3_A Acetoacetyl-COA reducta 90.5 0.8 2.7E-05 45.8 9.0 34 361-395 22-56 (269)
398 3ezy_A Dehydrogenase; structur 90.4 0.46 1.6E-05 49.7 7.3 88 365-504 3-93 (344)
399 3gdg_A Probable NADP-dependent 90.4 0.34 1.2E-05 48.2 6.1 37 359-396 15-54 (267)
400 3ehe_A UDP-glucose 4-epimerase 90.4 0.54 1.9E-05 47.6 7.7 29 365-395 2-31 (313)
401 2z5l_A Tylkr1, tylactone synth 90.4 1.3 4.3E-05 49.5 11.3 83 364-483 259-344 (511)
402 1smk_A Malate dehydrogenase, g 90.4 1.1 3.9E-05 46.9 10.4 33 365-397 9-43 (326)
403 4hb9_A Similarities with proba 90.3 0.26 9E-06 51.3 5.4 33 364-397 1-33 (412)
404 1e3i_A Alcohol dehydrogenase, 90.3 0.88 3E-05 48.0 9.5 34 363-396 195-228 (376)
405 1f0y_A HCDH, L-3-hydroxyacyl-C 90.3 0.26 9E-06 50.6 5.3 32 365-397 16-47 (302)
406 3sc6_A DTDP-4-dehydrorhamnose 90.3 0.51 1.7E-05 47.1 7.3 30 366-396 7-37 (287)
407 3r3s_A Oxidoreductase; structu 90.3 0.54 1.8E-05 48.0 7.6 36 360-396 45-81 (294)
408 2jhf_A Alcohol dehydrogenase E 90.2 1 3.5E-05 47.5 9.9 34 363-396 191-224 (374)
409 1mxh_A Pteridine reductase 2; 90.2 1.2 3.9E-05 44.6 9.8 36 360-396 7-43 (276)
410 1e7w_A Pteridine reductase; di 90.2 1.1 3.7E-05 45.7 9.7 34 361-395 6-40 (291)
411 2hun_A 336AA long hypothetical 90.1 0.73 2.5E-05 47.0 8.4 35 363-397 2-38 (336)
412 3nv9_A Malic enzyme; rossmann 90.0 0.22 7.7E-06 55.0 4.6 40 360-399 215-256 (487)
413 2hrz_A AGR_C_4963P, nucleoside 90.0 0.98 3.3E-05 46.2 9.3 36 362-397 12-54 (342)
414 2d8a_A PH0655, probable L-thre 89.9 0.5 1.7E-05 49.3 7.2 34 363-396 167-200 (348)
415 3ko8_A NAD-dependent epimerase 89.9 0.98 3.3E-05 45.5 9.1 31 365-396 1-32 (312)
416 2ydy_A Methionine adenosyltran 89.9 0.8 2.8E-05 46.3 8.5 32 364-396 2-34 (315)
417 1vl0_A DTDP-4-dehydrorhamnose 89.8 0.88 3E-05 45.5 8.6 34 363-397 11-45 (292)
418 2ywl_A Thioredoxin reductase r 89.7 0.33 1.1E-05 45.2 5.0 33 365-398 2-34 (180)
419 1xgk_A Nitrogen metabolite rep 89.6 2.9 0.0001 43.7 12.8 33 363-396 4-37 (352)
420 2ho3_A Oxidoreductase, GFO/IDH 89.6 0.68 2.3E-05 47.9 7.8 32 365-396 2-34 (325)
421 2fr1_A Erythromycin synthase, 89.6 1.5 5.1E-05 48.5 11.0 84 363-483 225-315 (486)
422 3kzv_A Uncharacterized oxidore 89.6 1.3 4.4E-05 44.0 9.5 33 364-396 2-36 (254)
423 4h7p_A Malate dehydrogenase; s 89.5 1.1 3.9E-05 47.6 9.6 84 360-484 20-110 (345)
424 2fzw_A Alcohol dehydrogenase c 89.5 1.1 3.7E-05 47.2 9.4 34 363-396 190-223 (373)
425 1ks9_A KPA reductase;, 2-dehyd 89.5 0.33 1.1E-05 48.8 5.1 32 366-398 2-33 (291)
426 3i4f_A 3-oxoacyl-[acyl-carrier 89.5 0.59 2E-05 46.4 7.0 33 363-396 6-39 (264)
427 2c29_D Dihydroflavonol 4-reduc 89.5 0.56 1.9E-05 48.1 7.0 32 363-395 4-36 (337)
428 3gem_A Short chain dehydrogena 89.5 1.2 4.1E-05 44.6 9.3 36 361-397 24-60 (260)
429 4gx0_A TRKA domain protein; me 89.4 1.7 5.9E-05 48.5 11.5 86 365-501 349-435 (565)
430 3dje_A Fructosyl amine: oxygen 89.4 0.33 1.1E-05 51.8 5.4 36 364-399 6-41 (438)
431 4g81_D Putative hexonate dehyd 89.4 0.5 1.7E-05 48.1 6.4 34 362-396 7-41 (255)
432 3zv4_A CIS-2,3-dihydrobiphenyl 89.4 0.67 2.3E-05 47.0 7.4 34 362-396 3-37 (281)
433 3vrd_B FCCB subunit, flavocyto 89.3 0.34 1.2E-05 51.2 5.4 36 363-398 1-37 (401)
434 3jv7_A ADH-A; dehydrogenase, n 89.3 1.3 4.4E-05 46.1 9.8 34 363-396 171-204 (345)
435 1b8p_A Protein (malate dehydro 89.3 0.93 3.2E-05 47.5 8.6 32 365-396 6-44 (329)
436 3ghy_A Ketopantoate reductase 89.3 0.26 9E-06 51.5 4.4 32 364-396 3-34 (335)
437 2qhx_A Pteridine reductase 1; 89.2 1.3 4.5E-05 46.0 9.7 35 360-395 42-77 (328)
438 1c0p_A D-amino acid oxidase; a 89.2 0.42 1.4E-05 49.7 5.8 36 364-400 6-41 (363)
439 3s2e_A Zinc-containing alcohol 89.1 0.81 2.8E-05 47.5 8.0 33 363-396 166-198 (340)
440 2bll_A Protein YFBG; decarboxy 89.1 2.8 9.7E-05 42.6 12.0 32 365-397 1-34 (345)
441 3ond_A Adenosylhomocysteinase; 89.1 0.34 1.2E-05 54.0 5.3 35 361-396 262-296 (488)
442 1obb_A Maltase, alpha-glucosid 89.1 2.4 8.1E-05 47.2 12.1 34 364-397 3-41 (480)
443 1r6d_A TDP-glucose-4,6-dehydra 89.0 3.6 0.00012 41.8 12.8 32 366-397 2-39 (337)
444 3guy_A Short-chain dehydrogena 89.0 0.84 2.9E-05 44.4 7.5 31 365-396 2-33 (230)
445 1cdo_A Alcohol dehydrogenase; 88.9 1.3 4.5E-05 46.6 9.5 34 363-396 192-225 (374)
446 3hg7_A D-isomer specific 2-hyd 88.9 0.38 1.3E-05 50.8 5.2 36 360-396 136-171 (324)
447 3dii_A Short-chain dehydrogena 88.8 0.8 2.7E-05 45.3 7.4 33 364-397 2-35 (247)
448 1rjw_A ADH-HT, alcohol dehydro 88.8 0.7 2.4E-05 48.1 7.3 33 363-396 164-196 (339)
449 3cea_A MYO-inositol 2-dehydrog 88.8 0.59 2E-05 48.6 6.7 33 364-396 8-42 (346)
450 2ekl_A D-3-phosphoglycerate de 88.7 0.4 1.4E-05 50.2 5.2 36 360-396 138-173 (313)
451 2yut_A Putative short-chain ox 88.7 0.61 2.1E-05 44.1 6.1 29 365-396 1-30 (207)
452 2ph3_A 3-oxoacyl-[acyl carrier 88.6 1.3 4.3E-05 43.1 8.6 29 365-394 2-31 (245)
453 3hn2_A 2-dehydropantoate 2-red 88.6 0.31 1.1E-05 50.4 4.4 32 365-397 3-34 (312)
454 3gms_A Putative NADPH:quinone 88.6 0.56 1.9E-05 48.8 6.4 33 363-396 144-177 (340)
455 1oc2_A DTDP-glucose 4,6-dehydr 88.6 4.1 0.00014 41.6 12.8 33 365-397 5-39 (348)
456 1leh_A Leucine dehydrogenase; 88.6 0.41 1.4E-05 51.4 5.3 38 358-396 167-204 (364)
457 2ew8_A (S)-1-phenylethanol deh 88.5 2.5 8.5E-05 41.7 10.7 35 361-396 4-39 (249)
458 4ea9_A Perosamine N-acetyltran 88.5 2.7 9.4E-05 40.9 10.9 87 363-502 11-98 (220)
459 3e18_A Oxidoreductase; dehydro 88.5 1 3.5E-05 47.5 8.3 34 363-396 4-38 (359)
460 1n2s_A DTDP-4-, DTDP-glucose o 88.5 1 3.4E-05 45.2 7.9 31 366-398 2-33 (299)
461 3qy9_A DHPR, dihydrodipicolina 88.4 0.76 2.6E-05 46.6 7.0 31 365-396 4-35 (243)
462 2vt3_A REX, redox-sensing tran 88.4 1.4 4.6E-05 43.9 8.7 87 364-503 85-173 (215)
463 1rpn_A GDP-mannose 4,6-dehydra 88.4 0.72 2.5E-05 47.0 6.9 36 361-397 11-47 (335)
464 1yqd_A Sinapyl alcohol dehydro 88.4 0.58 2E-05 49.4 6.3 33 363-396 187-219 (366)
465 3st7_A Capsular polysaccharide 88.3 1.5 5.1E-05 45.7 9.4 32 366-397 2-34 (369)
466 3ohs_X Trans-1,2-dihydrobenzen 88.3 1.1 3.7E-05 46.6 8.3 88 365-504 3-95 (334)
467 1y56_B Sarcosine oxidase; dehy 88.3 0.44 1.5E-05 49.6 5.3 36 364-400 5-40 (382)
468 3upl_A Oxidoreductase; rossman 88.3 1.7 5.7E-05 48.0 10.0 40 466-505 97-138 (446)
469 2rcy_A Pyrroline carboxylate r 88.2 0.38 1.3E-05 47.9 4.5 34 364-397 4-40 (262)
470 3o9z_A Lipopolysaccaride biosy 88.2 1.6 5.4E-05 45.3 9.4 33 365-397 4-37 (312)
471 3g17_A Similar to 2-dehydropan 88.2 0.32 1.1E-05 49.9 4.0 32 365-397 3-34 (294)
472 1ydw_A AX110P-like protein; st 88.1 1 3.6E-05 47.2 8.1 92 364-504 6-100 (362)
473 1u8x_X Maltose-6'-phosphate gl 88.0 2.6 9E-05 46.7 11.5 35 363-397 27-66 (472)
474 1vj0_A Alcohol dehydrogenase, 87.9 0.83 2.8E-05 48.5 7.2 34 363-396 195-228 (380)
475 3hhp_A Malate dehydrogenase; M 87.9 1.5 5E-05 46.0 8.9 32 366-397 2-36 (312)
476 2d0i_A Dehydrogenase; structur 87.7 0.41 1.4E-05 50.5 4.6 36 360-396 142-177 (333)
477 3asu_A Short-chain dehydrogena 87.7 1.3 4.6E-05 43.8 8.2 31 365-396 1-32 (248)
478 1x13_A NAD(P) transhydrogenase 87.7 0.48 1.7E-05 51.3 5.3 35 361-396 169-203 (401)
479 2p2s_A Putative oxidoreductase 87.7 1.5 5E-05 45.6 8.8 34 363-396 3-37 (336)
480 3ip3_A Oxidoreductase, putativ 87.6 0.7 2.4E-05 48.2 6.3 92 365-504 3-96 (337)
481 1ryi_A Glycine oxidase; flavop 87.6 0.46 1.6E-05 49.3 4.9 36 364-400 17-52 (382)
482 3c96_A Flavin-containing monoo 87.5 0.58 2E-05 49.7 5.7 35 364-398 4-38 (410)
483 2o7s_A DHQ-SDH PR, bifunctiona 87.5 0.37 1.3E-05 53.9 4.3 35 361-396 361-395 (523)
484 3ay3_A NAD-dependent epimerase 87.5 1.4 4.8E-05 43.6 8.2 31 365-396 3-34 (267)
485 3rp8_A Flavoprotein monooxygen 87.4 0.57 2E-05 49.5 5.6 38 360-398 19-56 (407)
486 1n7h_A GDP-D-mannose-4,6-dehyd 87.4 0.63 2.2E-05 48.6 5.9 32 365-397 29-61 (381)
487 1tlt_A Putative oxidoreductase 87.4 1.8 6.1E-05 44.5 9.2 33 364-396 5-39 (319)
488 2ejw_A HDH, homoserine dehydro 87.4 1.6 5.5E-05 46.2 8.9 32 474-505 66-97 (332)
489 2j6i_A Formate dehydrogenase; 87.3 0.46 1.6E-05 50.9 4.8 37 360-396 160-196 (364)
490 1zej_A HBD-9, 3-hydroxyacyl-CO 87.3 0.54 1.8E-05 48.9 5.1 32 363-396 11-42 (293)
491 1yvv_A Amine oxidase, flavin-c 87.3 0.52 1.8E-05 48.0 4.9 33 365-398 3-35 (336)
492 1e6u_A GDP-fucose synthetase; 87.2 1.7 5.8E-05 43.9 8.7 33 363-396 2-35 (321)
493 2aqj_A Tryptophan halogenase, 87.2 0.62 2.1E-05 51.7 5.9 35 364-399 5-42 (538)
494 2ehd_A Oxidoreductase, oxidore 87.1 1.3 4.6E-05 42.8 7.7 32 364-396 5-37 (234)
495 1wwk_A Phosphoglycerate dehydr 87.1 0.59 2E-05 48.7 5.4 36 360-396 138-173 (307)
496 3evn_A Oxidoreductase, GFO/IDH 87.0 1.8 6.2E-05 44.8 9.0 35 363-397 4-39 (329)
497 1j4a_A D-LDH, D-lactate dehydr 87.0 0.61 2.1E-05 49.2 5.4 36 360-396 142-177 (333)
498 1zh8_A Oxidoreductase; TM0312, 87.0 1.7 5.8E-05 45.4 8.9 90 363-504 17-111 (340)
499 2cuk_A Glycerate dehydrogenase 87.0 0.61 2.1E-05 48.8 5.4 36 360-396 140-175 (311)
500 1gz6_A Estradiol 17 beta-dehyd 86.9 1.7 5.8E-05 45.1 8.7 60 362-435 7-67 (319)
No 1
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=100.00 E-value=2.6e-140 Score=1187.74 Aligned_cols=584 Identities=41% Similarity=0.673 Sum_probs=520.9
Q ss_pred Cceeeec-CccCCChhhHHHHHhCCccccCCCCCCeeEEEEecCCC--CCCCcceEEEecCCCCCCCcccccccccccCC
Q 005745 13 SILQFAP-FQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAPCS--HLQVSNHLSLLTESLPSDSDEQSSTAEISRGS 89 (679)
Q Consensus 13 ~~l~f~p-~~s~vd~~Fw~~L~~~KL~~~kLd~~~~~i~g~~~~~~--~~~~~~~~~l~~~sf~~~~~~~~~~~~~~~~~ 89 (679)
.+|||+| |+|+||++|||+|+++|||+|||||+|++|+|+|++++ ..+.+++++|+++||+.+.. .+
T Consensus 7 ~~l~f~p~f~s~vd~~Fw~~l~~~Kl~~~kLd~~~~~i~g~~~~~~~~~~~~~~~~~~~~~sf~~~~~----------~~ 76 (615)
T 4gsl_A 7 RVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPLFLTNRSFEKHNN----------KR 76 (615)
T ss_dssp EECCCBCSCEEEECHHHHHHHHHTTCTTSCCSEEEEEEEEEECTTCCCTTCSBCEEEECGGGGSSSCC----------CC
T ss_pred CcceecCCcccccCchHHHHHHHhhcchhccCCCCeeEEEEEecCccccCCCCceEEEeHHHCCCccc----------CC
Confidence 4899999 99999999999999999999999999999999999987 77888999999999975421 14
Q ss_pred CceeeeeeeEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEeEeeccCCCC
Q 005745 90 RNKCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDP 169 (679)
Q Consensus 90 ~~~~~~~G~l~n~NT~e~fk~~dk~~ll~~~~~~i~~~i~~g~~~~~~~~l~~F~~~tfaDLKky~f~YwfafPal~~~~ 169 (679)
.+.++++|+|+|+||||+||++||++||+++|++||++. ++||++|++|+|||||||||||||||||||||++++
T Consensus 77 ~~~~~~~G~l~n~Nt~e~fk~~dk~~ll~~~~~~i~~~~-----~~~~~~l~~F~~lsfaDLKky~f~ywfafP~~~~~~ 151 (615)
T 4gsl_A 77 TNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDG-----IKDINKCVSFVIISFADLKKYRFYYWLGVPCFQRPS 151 (615)
T ss_dssp TTCEEEEEEEEEESSHHHHHTSCHHHHHHHHHHHHHHHH-----TTCGGGCCCEEEEEEEETTTTEEEEEEEEEEEESST
T ss_pred CCceEEEEEEEEeccHHHHhhcCHHHHHHHHHHHHHHcc-----ccCHHHHhhHHHHHHHhhhcceEEEEEEEcccCCCc
Confidence 467899999999999999999999999999999999963 789999999999999999999999999999999999
Q ss_pred CeeeeccCcccccCChHHHHHHHHHHhhhhhcCCCCCccEEEEEEeCCCcceeeccccchhhcCCCccEEEEEEcCCCCC
Q 005745 170 PATVVDLKPASLWFSSQEAESVSAACSDWRNSSLTADVPYFLLTIAPNSRATIRHLKDWEACEGDGQKLLFGFYDPCHLQ 249 (679)
Q Consensus 170 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~F~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~Dps~~~ 249 (679)
+|++..... +++..+.+.+++|+.. ...+||++... +.+|++|++....++.++ +|+|||+++
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~~~~~~~---~~~~~f~~~~~------~~~l~~~~~~~~~~~~~~-~f~Dps~~~ 214 (615)
T 4gsl_A 152 STVLHVRPE-------PSLKGLFSKCQKWFDV---NYSKWVCILDA------DDEIVNYDKCIIRKTKVL-AIRDTSTME 214 (615)
T ss_dssp TEEEEEEEC-------TTCCTHHHHHHHHHHH---CTTCSEEEECT------TSCEEECCHHHHHHHCEE-EEECCBCST
T ss_pred cceeccCCc-------hhhhHHHHHHHHHHhc---cCCcEEEEEec------ccchhhhhhccCCCceEE-EEECCCCCC
Confidence 998754211 1222344566788754 35678988752 245677766544456788 999999999
Q ss_pred CCCChHHHHHHHHHH-hhcCceeEEEEEEEeCCCcccCCCceEEEEEeecCCCCC-CCCCCccccceEec-CCcccceEe
Q 005745 250 NHPGWPLRNFLALIL-TRWKLKSVLFLCYRENRGFTDLGLSLVGEALITVPQGWG-DHQCVPNTVGWELN-KGRKVPRCI 326 (679)
Q Consensus 250 ~~pgw~lrN~l~~~~-~~~~~~~~~v~~~R~~~~~~~~~~S~~~~~~~~~~~~~~-~~~~~~~~~gwe~~-~Gkl~p~~~ 326 (679)
++|||||||||++++ .||++++++|+|||+..+ |++++++++...+.. .....|+++|||+| +||++||++
T Consensus 215 ~~pgw~lrN~l~~~~~~~~~~~~~~v~~~R~~~~------s~~~~~~~~~~~~~~~~~~~~~~~~GWE~n~~gkl~~~~~ 288 (615)
T 4gsl_A 215 NVPSALTKNFLSVLQYDVPDLIDFKLLIIRQNEG------SFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLAPRVV 288 (615)
T ss_dssp TCCBTHHHHHHHHHHHHCTTCCEEEEEEECSSSC------CEEEEEEEEESSCCCC--CCCCEEEEECCCTTSCSCCEEE
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEEEEcCCC------cEEEEEEcccccccccccccCccccccccCCCCCcceeEE
Confidence 999999999999998 899999999999998764 999999998643221 22357899999999 999999999
Q ss_pred cccCCCChhhhhhhhhhhhhhhhhhhcCCchhHHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCc
Q 005745 327 SLAKSMDPTRLAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLR 406 (679)
Q Consensus 327 dl~~~~dp~~la~~~~dlnlry~R~rllp~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~R 406 (679)
||+..|||.+++++++++|+++||||++|++|+++|+++||+||||||+||++|++|+++|||+|+|||+|+|+.+||+|
T Consensus 289 ~l~~~~dp~~la~~~~~Lnlklm~wRllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~R 368 (615)
T 4gsl_A 289 DLSSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVR 368 (615)
T ss_dssp ECHHHHCHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGT
T ss_pred eccccCCHHHHHhhhhhhhhHHHHHhhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChH
Q 005745 407 QSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE 486 (679)
Q Consensus 407 Q~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e 486 (679)
|+||+.+|+ |++||++|+++|+++||+++++++..+||||||++++ +++...+.+++.++++++|+||+|+||++
T Consensus 369 Q~L~~~~dI---G~~KAeaaa~~L~~iNP~V~v~~~~~~Ipm~gh~v~~--e~~~~l~~~~l~~ll~~~DlVvd~tDn~~ 443 (615)
T 4gsl_A 369 QALYNFEDC---GKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVN--EEAQHKDFDRLRALIKEHDIIFLLVDSRE 443 (615)
T ss_dssp STTCCGGGT---TSBHHHHHHHHHHHHCTTCEEEEECCCCCCTTCCCSC--HHHHHHHHHHHHHHHHHCSEEEECCSSGG
T ss_pred ccCCChhhc---ChHHHHHHHHHHHhhCCCcEEEEeeccccccCccccc--hhhhcCCHHHHHHHhhcCCEEEecCCCHH
Confidence 999999999 9999999999999999999999999999999999975 23345566788899999999999999999
Q ss_pred HHHHHHHHHHhcCCeEEEEeeCcceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCC
Q 005745 487 SRWLPTLLCANTNKITITAALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPT 566 (679)
Q Consensus 487 sR~lin~~~~~~~kp~I~aalG~~g~vv~~hg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gCY~C~dv~aP~ 566 (679)
+|++++++|..+++|+|++++|++||++++||.... ..++++|||+|+++++|.
T Consensus 444 tR~~ln~~c~~~~~PlI~aalG~~Gql~v~~g~~~~--------------------------~~~~~~~CY~Cl~~~~P~ 497 (615)
T 4gsl_A 444 SRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDE--------------------------QSSKQLGCYFCHDVVAPT 497 (615)
T ss_dssp GTHHHHHHHHHTTCEEEEEEECSSEEEEEECCC--------------------------------CCCCCTTTSCSSCTT
T ss_pred HHHHHHHHHHHcCCeEEEEEccceeEEEEeeccccc--------------------------CCCCCCCceeeCCCCCCc
Confidence 999999999999999999999999999999974210 113478999999999999
Q ss_pred CCCccccccccccccCcchHHHHHHHHHHHHHHHhcCCCccCCCccccCCCCCCCCCCCCCCcchhhhccccccceeEec
Q 005745 567 DSTANRTLDQQCTVTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQMTLV 646 (679)
Q Consensus 567 ~s~~drtLdq~CtV~~Pgv~~ias~~AvEll~~ll~~~~~~~ap~~~~~~~~~~~~~~~lG~~ph~irg~l~~f~~~~~~ 646 (679)
++..+||+||+|+|++|++++||++||+|+|+.|+|||.+.+ .++++|.+||+|||+..+|+++++.
T Consensus 498 ~~~~~rtl~~~C~Vl~P~vgiigs~qA~EaLk~Ll~~g~~~~-------------~~~~~G~l~~~~dg~~~~f~~~~l~ 564 (615)
T 4gsl_A 498 DSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSLLQTKYSGS-------------ETTVLGDIPHQIRGFLHNFSILKLE 564 (615)
T ss_dssp SCTTTTTTTCTTCCCCHHHHHHHHHHHHHHHHHHHSCCCTTS-------------SEETTEECCSEEEEETTTTEEEEEC
T ss_pred ccccccccccCcceecchHHHHHHHHHHHHHHHHhCCCCccc-------------CcCcCCCCcEEEeccCCcceEEecc
Confidence 988899999999999999999999999999999999987532 1257899999999999999999999
Q ss_pred cCCCCCCccCCcccccc-ccchhHHHHHHhcCC
Q 005745 647 GHSSNSCTACCSTVRSD-NSILFYFLNQVLNGV 678 (679)
Q Consensus 647 ~~~~~~C~aCs~~v~~~-~~~g~~fv~~~~n~~ 678 (679)
++++++|++||+.|+++ +++||+||++||||+
T Consensus 565 ~~~~p~C~~C~~~v~~~~~~~~~~f~~~~~~~~ 597 (615)
T 4gsl_A 565 TPAYEHCPACSPKVIEAFTDLGWEFVKKALEHP 597 (615)
T ss_dssp CCCCTTCTTTCHHHHHHHHHHHHHHHHHHHHCH
T ss_pred CCCCCCCCCCCHHHHHHHHhcCHHHHHHHhcCc
Confidence 99999999999999999 999999999999986
No 2
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=100.00 E-value=2.9e-133 Score=1130.08 Aligned_cols=584 Identities=40% Similarity=0.647 Sum_probs=506.8
Q ss_pred Cceeeec-CccCCChhhHHHHHhCCccccCCCCCCeeEEEEecC--CCCCCCcceEEEecCCCCCCCcccccccccccCC
Q 005745 13 SILQFAP-FQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAP--CSHLQVSNHLSLLTESLPSDSDEQSSTAEISRGS 89 (679)
Q Consensus 13 ~~l~f~p-~~s~vd~~Fw~~L~~~KL~~~kLd~~~~~i~g~~~~--~~~~~~~~~~~l~~~sf~~~~~~~~~~~~~~~~~ 89 (679)
.+|||+| |+|+||++|||+|+++|||+|||||+|++|+|+|++ ++..+.+++++|+++||+ +.. ..+
T Consensus 8 ~~l~f~p~~~s~~~~~Fw~~l~~~Kl~~~kLd~~~~~i~g~~~~~~~~~~~~~~~~~~~~~s~~-~~~---------~~~ 77 (598)
T 3vh1_A 8 RVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPLFLTNRSFE-KHN---------NKR 77 (598)
T ss_dssp EECCCBCSEEEEECHHHHHHHHHHHHC------CEEEEEEEECSSCCCTTCSBEEEEECTTTTC-SCC---------CCC
T ss_pred ccceecCccccccCchHHHHHHhhhcchhccCCCCceEEEEEccCCCCCCCCCeeEEEehHHhc-ccc---------cCC
Confidence 4799999 999999999999999999999999999999999999 678899999999999996 211 012
Q ss_pred CceeeeeeeEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEeEeeccCCCC
Q 005745 90 RNKCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDP 169 (679)
Q Consensus 90 ~~~~~~~G~l~n~NT~e~fk~~dk~~ll~~~~~~i~~~i~~g~~~~~~~~l~~F~~~tfaDLKky~f~YwfafPal~~~~ 169 (679)
.+.++++|+|+|+||+|+||++||++||+++|++||++ +++||++|++|+|+|||||||||||||||||||++++
T Consensus 78 ~~~~~~~G~l~n~Nt~e~fk~~dk~~ll~~~~~~i~~~-----~~~~p~~l~~f~~~~faDlKk~~f~yw~afP~~~~~~ 152 (598)
T 3vh1_A 78 TNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWED-----GIKDINKCVSFVIISFADLKKYRFYYWLGVPCFQRPS 152 (598)
T ss_dssp TTCEEEEEEEEEESSHHHHHTSCHHHHHHHHHHHHHHH-----HTTCGGGCCCEEEEEEEETTTTEEEEEEEEEEEESST
T ss_pred CceEEEEeEEEeeecHHHHhhcCHHHHHHHHHHHHHHH-----hhcchhHHHHHHHHHHhhhcceEEEEEEEEeccCCCC
Confidence 34689999999999999999999999999999999999 6889999999999999999999999999999999998
Q ss_pred CeeeeccCcccccCChHHHHHHHHHHhhhhhcC-CCCCccEEEEEEeCCCcceeeccccchhhcCCCccEEEEEEcCCCC
Q 005745 170 PATVVDLKPASLWFSSQEAESVSAACSDWRNSS-LTADVPYFLLTIAPNSRATIRHLKDWEACEGDGQKLLFGFYDPCHL 248 (679)
Q Consensus 170 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~-~~~~~~F~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~Dps~~ 248 (679)
+|++.. ++.++.+.+.+ |+.+. +....+||++... .+++.+|.++. ...++ ++ +|+|||++
T Consensus 153 ~~~~~~-------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~--~~~~~-~~-~f~dps~~ 214 (598)
T 3vh1_A 153 STVLHV-------RPEPSLKGLFS----KCQKWFDVNYSKWVCILDA---DDEIVNYDKCI--IRKTK-VL-AIRDTSTM 214 (598)
T ss_dssp TCCEEE-------EEECCCHHHHH----HHHHHHHHCTTCSEEEECT---TCCEEECCHHH--HHHHC-EE-EEECCBCS
T ss_pred ceeEec-------CCHHHHHHHHH----HhhccccccccceEEEEec---cceEeehhhcC--CCccc-EE-EEECCCCC
Confidence 888753 23334444443 66543 3456789998743 46677775541 11223 66 99999999
Q ss_pred CCCCChHHHHHHHHHHhhcC-ceeEEEEEEEeCCCcccCCCceEEEEEeecCCCCCCCCCCccccceEec-CCcccceEe
Q 005745 249 QNHPGWPLRNFLALILTRWK-LKSVLFLCYRENRGFTDLGLSLVGEALITVPQGWGDHQCVPNTVGWELN-KGRKVPRCI 326 (679)
Q Consensus 249 ~~~pgw~lrN~l~~~~~~~~-~~~~~v~~~R~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~gwe~~-~Gkl~p~~~ 326 (679)
+++|||||||||+++++||+ +++++|+|||+ +++++.+|+++++.++...+. . ..|+++|||++ +||+.|+.+
T Consensus 215 ~~~pgw~lrn~l~~~~~~~~~~~~~~~~~~r~--~~~~~~~s~~~~~~~~~~~~~--~-~~~~~~gwe~~~~Gkl~g~~t 289 (598)
T 3vh1_A 215 ENVPSALTKNFLSVLQYDVPDLIDFKLLIIRQ--NEGSFALNATFASIDPQSSSS--N-PDMKVSGWERNVQGKLAPRVV 289 (598)
T ss_dssp TTCCBTTHHHHHHHHHHHCSSCCEEEEEEECS--SSCCEEEEEEECCCCC----------CCEEEEECCCTTSSSSCEEE
T ss_pred ccCchHHHHHHHHHHHHhCCCCceeEEEEEec--CCCccCceEEEEEecCccccc--c-cCCcCcCccCCCCCCCcceee
Confidence 99999999999999999999 69999999999 446778999999988753211 1 47999999999 999999999
Q ss_pred cccCCCChhhhhhhhhhhhhhhhhhhcCCchhHHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCc
Q 005745 327 SLAKSMDPTRLAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLR 406 (679)
Q Consensus 327 dl~~~~dp~~la~~~~dlnlry~R~rllp~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~R 406 (679)
|+...|+|.+++++++++|+|+||||++|++||++|+++||+||||||+||+||++|+++|||+|+|||+|+|+.|||+|
T Consensus 290 D~~g~l~~~~la~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~R 369 (598)
T 3vh1_A 290 DLSSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVR 369 (598)
T ss_dssp ECHHHHCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTT
T ss_pred cchhccCHHHHHHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChH
Q 005745 407 QSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE 486 (679)
Q Consensus 407 Q~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e 486 (679)
|+||+.+|+ |++||++|+++|+++||+++++++..+||||||+++.+++ ...+.+++.++++++|+||+|+||++
T Consensus 370 Q~L~~~~Dv---G~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~--~~l~~~~l~~li~~~DvVvdatDn~~ 444 (598)
T 3vh1_A 370 QALYNFEDC---GKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEA--QHKDFDRLRALIKEHDIIFLLVDSRE 444 (598)
T ss_dssp STTCCSTTC---SSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHH--HHHHHHHHHHHHHHCSEEEECCSBGG
T ss_pred ccccchhhc---CcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccc--cccCHHHHHHHHhcCCEEEECCCCHH
Confidence 999999999 9999999999999999999999999999999999864211 23356778899999999999999999
Q ss_pred HHHHHHHHHHhcCCeEEEEeeCcceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCC
Q 005745 487 SRWLPTLLCANTNKITITAALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPT 566 (679)
Q Consensus 487 sR~lin~~~~~~~kp~I~aalG~~g~vv~~hg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gCY~C~dv~aP~ 566 (679)
+|++++++|..+++|+|++++|++||++++||..|. +...++|||+|+++.+|.
T Consensus 445 tR~lin~~c~~~~~plI~aa~G~~Gqv~v~~g~~p~--------------------------~~~~~~~Cy~Cl~~~~p~ 498 (598)
T 3vh1_A 445 SRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDE--------------------------QSSKQLGCYFCHDVVAPT 498 (598)
T ss_dssp GTHHHHHHHHHTTCEEEEEEECSSEEEEEEEC----------------------------------CBCCTTTSCSSCSS
T ss_pred HHHHHHHHHHhcCCCEEEEEECCccEEEEEccCCCc--------------------------cCCCCCCceeecCccCCC
Confidence 999999999999999999999999999999975330 112368999999999998
Q ss_pred CCCccccccccccccCcchHHHHHHHHHHHHHHHhcCCCccCCCccccCCCCCCCCCCCCCCcchhhhccccccceeEec
Q 005745 567 DSTANRTLDQQCTVTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQMTLV 646 (679)
Q Consensus 567 ~s~~drtLdq~CtV~~Pgv~~ias~~AvEll~~ll~~~~~~~ap~~~~~~~~~~~~~~~lG~~ph~irg~l~~f~~~~~~ 646 (679)
++..++|+|++|+|++|++++||++||+|+|+.|+++++ ||+.. +++|.+||++||++..|+.+++.
T Consensus 499 ~~~~~~tld~~C~Vl~p~vgvigslqA~Ealk~Llg~~~---ap~~~----------~~~g~l~~~l~g~l~~f~~~~l~ 565 (598)
T 3vh1_A 499 DSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSLLQTKY---SGSET----------TVLGDIPHQIRGFLHNFSILKLE 565 (598)
T ss_dssp SCTTTTTTTBSCCCSCTHHHHHHHHHHHHHHHHHHSCCC---SSSSE----------ETTEECCSEEEEETTTTEEEEEC
T ss_pred ccccccccCCCCCccCcHHHHHHHHHHHHHHHHHhCCCc---ccccc----------cccccccceeecccccceeEecc
Confidence 888888999999999999999999999999999999987 55532 46899999999999999999999
Q ss_pred cCCCCCCccCCcccccc-ccchhHHHHHHhcCC
Q 005745 647 GHSSNSCTACCSTVRSD-NSILFYFLNQVLNGV 678 (679)
Q Consensus 647 ~~~~~~C~aCs~~v~~~-~~~g~~fv~~~~n~~ 678 (679)
.+++++|++||..++.+ +++||+||++||||+
T Consensus 566 ~~r~~~C~~Cg~~~~~~~~~~~~~f~~~~~n~~ 598 (598)
T 3vh1_A 566 TPAYEHCPACSPKVIEAFTDLGWEFVKKALEHP 598 (598)
T ss_dssp CBCCTTCTTTSHHHHHHHHHHTHHHHHHHHHCC
T ss_pred CCCCCCCCCCchHHHHHHHhCcHHHHHHHhcCC
Confidence 98999999999999999 999999999999986
No 3
>3vx8_D Ubiquitin-like modifier-activating enzyme ATG7; E1-E2 complex, ligase; 3.11A {Arabidopsis thaliana}
Probab=100.00 E-value=1.5e-81 Score=667.70 Aligned_cols=317 Identities=70% Similarity=1.223 Sum_probs=274.8
Q ss_pred CCceeeecCccCCChhhHHHHHhCCccccCCCCCCeeEEEEecCCCCCCCcceEEEecCCCCCCCcccccccccccCCCc
Q 005745 12 GSILQFAPFQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAPCSHLQVSNHLSLLTESLPSDSDEQSSTAEISRGSRN 91 (679)
Q Consensus 12 ~~~l~f~p~~s~vd~~Fw~~L~~~KL~~~kLd~~~~~i~g~~~~~~~~~~~~~~~l~~~sf~~~~~~~~~~~~~~~~~~~ 91 (679)
+.+|||+||+|+||++|||+|+++|||+|||||+|++|+|+|++++..+.+++|+|+++||+.+..... ......+.+
T Consensus 6 ~~~LqF~Pf~S~vd~sFw~~Ls~lKLd~~KLdds~~~I~g~y~~~~~~~~~~~l~l~~~sf~~~~~~~~--~~~~~~~~~ 83 (323)
T 3vx8_D 6 AIILQFAPLNSSVDEGFWHSFSSLKLDKLGIDDSPISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLI--ASTSHGNRN 83 (323)
T ss_dssp -CBCCCBCCCEEECHHHHHHHHHHHHHTTTTCCCCEEEEEEECSCCBTTBCCCEEECGGGCC--------------CBTT
T ss_pred ccceeecCcccccCchHHHHHHhcccchhccCCCCceeEEEEecCCCCCCCceEEecHHHcCCcccccc--cccccCCCC
Confidence 348999999999999999999999999999999999999999999988899999999999975421100 000112346
Q ss_pred eeeeeeeEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEeEeeccCCCCCe
Q 005745 92 KCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDPPA 171 (679)
Q Consensus 92 ~~~~~G~l~n~NT~e~fk~~dk~~ll~~~~~~i~~~i~~g~~~~~~~~l~~F~~~tfaDLKky~f~YwfafPal~~~~~~ 171 (679)
+++++|+|+|+||||+||++||++||+++|++||++|++|++++||++|++|+|||||||||||||||||||||+++++|
T Consensus 84 ~~~~~G~L~N~NTiE~FK~~DK~~ll~~~~~~iw~~I~sg~~~~dpslL~~F~ilsFADLKKykFyYWfafPal~~~~~~ 163 (323)
T 3vx8_D 84 KCPVPGILYNTNTVESFNKLDKQSLLKAEANKIWEDIQSGKALEDPSVLPRFLVISFADLKKWSFRYWFAFPAFVLDPPV 163 (323)
T ss_dssp BEEEEEEEEEESSHHHHHHSCSHHHHHHHHHHHHHHHHHTHHHHCGGGTTCEEEEEEEETTTTEEEEEEEEEEECCSSCC
T ss_pred ceEEEEEEEEeecHHHHhhhCHHHHHHHHHHHHHHHHhcCccccCHHHhhhhhhhhhhhhccceEEEEEEecCcCCCccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCcccccCChHHHHHHHHHHhhhhhcCCCCCccEEEEEEeCCCcceeeccccchhhcCC-CccEEEEEEcCCCCCC
Q 005745 172 TVVDLKPASLWFSSQEAESVSAACSDWRNSSLTADVPYFLLTIAPNSRATIRHLKDWEACEGD-GQKLLFGFYDPCHLQN 250 (679)
Q Consensus 172 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~F~l~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~f~Dps~~~~ 250 (679)
++.........|+.+++..+.+.+++|++.....+++||+++...+..+++++|++|+.+... .+.++ ||+|||++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~fFl~~~~~~~~~~~~~L~~~~~~~~~~~~~~~-~F~Dps~~~~ 242 (323)
T 3vx8_D 164 SLIELKPASEYFSSEEAESVSAACNDWRDSDLTTDVPFFLVSVSSDSKASIRHLKDLEACQGDHQKLLF-GFYDPCHLPS 242 (323)
T ss_dssp EEEEEEEHHHHSCHHHHHHHHHHHHHHHHSTTSTTCCEEEEEEETTSCEEEECGGGHHHHCSTTEEEEE-EEECCCCCTT
T ss_pred eeecccccccccCHHHHHHHHHHHHHHHhcccccccceEEEEecCCCceeeechhhhhhccccCCceEE-EEEcCCCCCC
Confidence 886553333478889999999999999998766778899998876777899999999875543 45677 9999999999
Q ss_pred CCChHHHHHHHHHHhhcCceeEEEEEEEeCCCcccCCCceEEEEEeecCCCCCCCCCCccccceEecCCcccceEecccC
Q 005745 251 HPGWPLRNFLALILTRWKLKSVLFLCYRENRGFTDLGLSLVGEALITVPQGWGDHQCVPNTVGWELNKGRKVPRCISLAK 330 (679)
Q Consensus 251 ~pgw~lrN~l~~~~~~~~~~~~~v~~~R~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~gwe~~~Gkl~p~~~dl~~ 330 (679)
+|||||||||++|++||++++++|||||+..|+++..+|+++++++++..+. .....|+++|||+|+|||+||++||++
T Consensus 243 ~PGWpLRNlL~ll~~~~~~~~v~vlc~Rd~~~~~~~~~Siil~~~~~~~~~~-~~~~~pk~vGWErn~GKl~PR~vdLs~ 321 (323)
T 3vx8_D 243 NPGWPLRNYLALIRSRWNLETVWFFCYRESRGFADLNLSLVGQASITLSSGE-SAETVPNSVGWELNKGKRVPRSISLAN 321 (323)
T ss_dssp CCBTTHHHHHHHHHHHHCCSEEEEEEECEETTEECTTTCEEEEEECCC------CCSCCCEEEECCBTTBSCCEEEECST
T ss_pred CCCHHHHHHHHHHHHhcCCceEEEEEEecCCCCcCccceEEEEEeccccccc-cccCCCccccccccCCcccceEechHh
Confidence 9999999999999999999999999999998999999999999999863221 113678999999999999999999998
Q ss_pred CC
Q 005745 331 SM 332 (679)
Q Consensus 331 ~~ 332 (679)
+|
T Consensus 322 ~M 323 (323)
T 3vx8_D 322 SM 323 (323)
T ss_dssp TC
T ss_pred cC
Confidence 87
No 4
>3vx6_A E1; 2.60A {Kluyveromyces marxianus} PDB: 3vx7_A
Probab=100.00 E-value=1.8e-75 Score=609.52 Aligned_cols=275 Identities=25% Similarity=0.344 Sum_probs=228.8
Q ss_pred CCceeeec-CccCCChhhHHHHHhCCccccCCCCCCeeEEEEecCCCCCCCcceEEEecCCCCCCCcccccccccccCCC
Q 005745 12 GSILQFAP-FQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAPCSHLQVSNHLSLLTESLPSDSDEQSSTAEISRGSR 90 (679)
Q Consensus 12 ~~~l~f~p-~~s~vd~~Fw~~L~~~KL~~~kLd~~~~~i~g~~~~~~~~~~~~~~~l~~~sf~~~~~~~~~~~~~~~~~~ 90 (679)
+.+|||+| |+|+||++|||+|+++|||+|||||+|++|+|+|++++..+.+++++|+++||+.+.. +.
T Consensus 6 ~~~LqF~P~f~S~vd~sFw~~Ls~lKLd~~KLdds~~~I~g~y~~~~~~~~~~~l~l~~~sf~~~~~-----------~~ 74 (283)
T 3vx6_A 6 VSDLKFAPSFQSFVDSSFFHELSRLKLDIFKLDSDEKALYTQLDLNQFTSNVLAISLRDDSFQKPDN-----------DE 74 (283)
T ss_dssp --CCCCBCSCEEEECHHHHHHHHHHHHHTTCCSCEEEEEEEECCSSSCBTTBCEEEECGGGGSCCC--------------
T ss_pred cccccccCCcccccCchHHHHHHhcccchhccCCCCceeEEEEecCCCCCCCceEEEeHHHcCCCCC-----------CC
Confidence 46899999 9999999999999999999999999999999999999888999999999999986531 34
Q ss_pred ceeeeeeeEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEeEeeccCCCCC
Q 005745 91 NKCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDPP 170 (679)
Q Consensus 91 ~~~~~~G~l~n~NT~e~fk~~dk~~ll~~~~~~i~~~i~~g~~~~~~~~l~~F~~~tfaDLKky~f~YwfafPal~~~~~ 170 (679)
+.++++|+|+|+||||+||++||++||+++|++||+ +| +.+||++|++|+|||||||||||||||||||||+++++
T Consensus 75 ~~~~~~G~l~N~NTiE~FK~~DK~~ll~~~~~~i~~---sg-~~~dpslL~~F~ilsFADLKKykFyYWfafPal~~~~~ 150 (283)
T 3vx6_A 75 HNIILKGYLLNFNTIELFKNCNKIQFIKEKGQELLQ---RG-LENDLNEIISFYMISFADLKKYKFYYWICMPSFQSDGA 150 (283)
T ss_dssp CCCEEEEEEEEESSHHHHHHSCHHHHHHHHHHHHHH---HH-HHTCGGGGCCEEEEEEEETTTTEEEEEEEEEECCBTTC
T ss_pred CceeeeEEEEEeccHHHHHhcCHHHHHHHHHHHHHH---cc-cccCHHHhhhhhhhhhhhhcccEEEEEEEeccccCCcc
Confidence 678999999999999999999999999999999999 56 55599999999999999999999999999999999999
Q ss_pred eeeeccCcccccCChHHHHHHHHHHhhhhhcCCCCC-ccEEEEEEeCCCcceeeccccchhhcCCCccEEEEEEcCCCCC
Q 005745 171 ATVVDLKPASLWFSSQEAESVSAACSDWRNSSLTAD-VPYFLLTIAPNSRATIRHLKDWEACEGDGQKLLFGFYDPCHLQ 249 (679)
Q Consensus 171 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~F~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~Dps~~~ 249 (679)
|++..... .++. ++|+.. .. .+||++.. +.+.+|++|+.....++.++ ||+|||+++
T Consensus 151 ~~~~~~~~---~~~~----------~~~~~~---~~~~~ffl~~~-----~~~~~L~~~~~~~~~~~~~~-~f~Dps~~~ 208 (283)
T 3vx6_A 151 TYQIISSK---VIAS----------DSDISV---SFIKQNVIIAC-----VISGVIQKATPDNLKVCEKV-VFKDFSHLK 208 (283)
T ss_dssp EEEEEEEE---ECCT----------TSHHHH---HHHTSSCSEEE-----EETTEEECCCHHHHHHCSEE-EEECSBCST
T ss_pred ceeccCcc---ccch----------hhhhhc---cccCCEEEEEe-----ccccchhhhccccCCCceEE-EEECCCCCC
Confidence 88754311 1121 244432 13 46887764 34566788876544457788 999999999
Q ss_pred CCCChHHHHHHHHHHhhcCceeEEEEEEEeCCCcccCCCceEEEEEeecCCCCCCCCCCccccceEec-CCcccceEecc
Q 005745 250 NHPGWPLRNFLALILTRWKLKSVLFLCYRENRGFTDLGLSLVGEALITVPQGWGDHQCVPNTVGWELN-KGRKVPRCISL 328 (679)
Q Consensus 250 ~~pgw~lrN~l~~~~~~~~~~~~~v~~~R~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~gwe~~-~Gkl~p~~~dl 328 (679)
++|||||||||+++++||++++++|+|||+..+ |+++++++++. ....|+++|||+| +|||+||++||
T Consensus 209 ~~PGWpLRNlL~ll~~~~~~~~v~vl~~R~~~~------S~~~~l~~~~~-----~~~~pk~vGWErn~~GKl~Pr~vdL 277 (283)
T 3vx6_A 209 DIPSAVTKNILTVWSKLSPRETYTICFLRSDES------SFEAEIIINNG-----NNPSLKVSGWEKNGLGKLAPKSIDL 277 (283)
T ss_dssp TCCBTTHHHHHHHHHHHSCCSCEEEEEECTTTT------CEEEEEEEEST-----TCSSBCCEEECC-----CCCEEECC
T ss_pred CCCCHHHHHHHHHHHHhcCCceEEEEEEeCCCC------cEEEEEEecCC-----CCcCCcccccCCCCCCCcCceEech
Confidence 999999999999999999999999999998764 99999999863 2246899999999 99999999999
Q ss_pred cCCCCh
Q 005745 329 AKSMDP 334 (679)
Q Consensus 329 ~~~~dp 334 (679)
+++|||
T Consensus 278 s~~MDP 283 (283)
T 3vx6_A 278 SSLMDP 283 (283)
T ss_dssp CCC---
T ss_pred hhccCc
Confidence 999998
No 5
>3t7h_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, ligase; 1.60A {Saccharomyces cerevisiae} PDB: 3t7f_A 3t7g_A 3ruj_A 4gsj_A*
Probab=100.00 E-value=1.2e-74 Score=606.56 Aligned_cols=279 Identities=27% Similarity=0.442 Sum_probs=236.2
Q ss_pred Cceeee-cCccCCChhhHHHHHhCCccccCCCCCCeeEEEEecCCC--CCCCcceEEEecCCCCCCCcccccccccccCC
Q 005745 13 SILQFA-PFQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAPCS--HLQVSNHLSLLTESLPSDSDEQSSTAEISRGS 89 (679)
Q Consensus 13 ~~l~f~-p~~s~vd~~Fw~~L~~~KL~~~kLd~~~~~i~g~~~~~~--~~~~~~~~~l~~~sf~~~~~~~~~~~~~~~~~ 89 (679)
.+|||+ ||+|+||++|||+|+++|||+|||||+|++|+|+|++++ ..+.+++|+|+++||+.+.. .+
T Consensus 7 ~~LqF~~Pf~S~vd~~Fw~~Ls~lKLd~~KLdds~~~I~g~y~~~~~~~~~~~~~l~l~~~sf~~~~~----------~~ 76 (291)
T 3t7h_A 7 RVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPLFLTNRSFEKHNN----------KR 76 (291)
T ss_dssp EECCCBCSEEEEECHHHHHHHHHHHTTCTTCSEEEEEEEEEECSSCCCTTCSBEEEEECGGGGC---------------C
T ss_pred CceeeccCcccccChHHHHHHHhcccchhccCCCCceEEEEEccCccccCCCCcEEEEeHHHCCCCCC----------CC
Confidence 489999 999999999999999999999999999999999999987 78889999999999986531 13
Q ss_pred CceeeeeeeEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEeEeeccCCCC
Q 005745 90 RNKCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDP 169 (679)
Q Consensus 90 ~~~~~~~G~l~n~NT~e~fk~~dk~~ll~~~~~~i~~~i~~g~~~~~~~~l~~F~~~tfaDLKky~f~YwfafPal~~~~ 169 (679)
.+.++++|+|+|+||||+||++||++||+++|++||++ | ++||++|++|+|||||||||||||||||||||++++
T Consensus 77 ~~~~~~~G~l~N~NTiEeFK~~DK~~ll~~~~~~i~~~---g--~~dpslL~~F~ilsFADLKKykFyYWfafPal~~~~ 151 (291)
T 3t7h_A 77 TNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWED---G--IKDINKCVSFVIISFADLKKYRFYYWLGVPCFQRPS 151 (291)
T ss_dssp TTCEEEEEEEEEESSHHHHHHCCHHHHHHHHHHHHHHH---H--TTCGGGCCCEEEEEEEETTTTEEEEEEEEEEEESST
T ss_pred CCceeeeEEEEEeccHHHHhhcCHHHHHHHHHHHHHhc---c--ccChHHhhhhheehhhhhcccEEEEEEEEccccCCc
Confidence 46889999999999999999999999999999999995 4 789999999999999999999999999999999999
Q ss_pred CeeeeccCcccccCChHHHHHHHHHHhhhhhcCCCCCccEEEEEEeCCCcceeeccccchhhcCCCccEEEEEEcCCCCC
Q 005745 170 PATVVDLKPASLWFSSQEAESVSAACSDWRNSSLTADVPYFLLTIAPNSRATIRHLKDWEACEGDGQKLLFGFYDPCHLQ 249 (679)
Q Consensus 170 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~F~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~Dps~~~ 249 (679)
+|++.... .+++..+.+.+++|+.. ...+||++... +.+|++|+.....++.++ ||+|||+++
T Consensus 152 ~~~~~~~~-------~~~~~~l~~~~~~~~~~---~~~~ffl~~~~------~~~L~~~~~~~~~~~~~~-~f~Dps~~~ 214 (291)
T 3t7h_A 152 STVLHVRP-------EPSLKGLFSKCQKWFDV---NYSKWVCILDA------DDEIVNYDKCIIRKTKVL-AIRDTSTME 214 (291)
T ss_dssp TEEEEEEE-------CGGGGGGHHHHHHHHHH---CTTCSEEEECT------TSCEEECCHHHHHHHCEE-EEECCBCST
T ss_pred ccccccCC-------chhhHHHHHHHHHHHhc---cCCcEEEEEcc------ccchhhhhcccCCCceEE-EEECCCCCC
Confidence 98875421 13444556677888754 35678988752 345677765544456788 999999999
Q ss_pred CCCChHHHHHHHHHH-hhcCceeEEEEEEEeCCCcccCCCceEEEEEeecCCCC-CCCCCCccccceEec-CCcccceEe
Q 005745 250 NHPGWPLRNFLALIL-TRWKLKSVLFLCYRENRGFTDLGLSLVGEALITVPQGW-GDHQCVPNTVGWELN-KGRKVPRCI 326 (679)
Q Consensus 250 ~~pgw~lrN~l~~~~-~~~~~~~~~v~~~R~~~~~~~~~~S~~~~~~~~~~~~~-~~~~~~~~~~gwe~~-~Gkl~p~~~ 326 (679)
++|||||||||++++ +||++++++|+|||+..+ |+++++++++..+. ......|+++|||+| +|||+||++
T Consensus 215 ~~PGWpLRNlL~ll~~~~~~~~~v~vlc~Rd~~~------S~i~~l~l~~~~~~~~~~~~~pk~vGWErn~~GKl~PR~v 288 (291)
T 3t7h_A 215 NVPSALTKNFLSVLQYDVPDLIDFKLLIIRQNEG------SFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLADRVV 288 (291)
T ss_dssp TCCBTTHHHHHHHHHHHCTTCCEEEEEEECSSSC------CEEEEEEEEECC-----CCCCCEEEEECCCTTSSSCCEEE
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEEEeCCCC------cEEEEEEcccccccccccccCCcccccCCCCCCCccceee
Confidence 999999999999998 789999999999998764 99999999874211 123357999999999 999999999
Q ss_pred ccc
Q 005745 327 SLA 329 (679)
Q Consensus 327 dl~ 329 (679)
||+
T Consensus 289 dLs 291 (291)
T 3t7h_A 289 DLS 291 (291)
T ss_dssp EC-
T ss_pred cCC
Confidence 985
No 6
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=100.00 E-value=7e-73 Score=603.84 Aligned_cols=303 Identities=53% Similarity=0.871 Sum_probs=281.6
Q ss_pred CChhhhhhhhhhhhhhhhhhhcCCchhHHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCC
Q 005745 332 MDPTRLAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYT 411 (679)
Q Consensus 332 ~dp~~la~~~~dlnlry~R~rllp~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~ 411 (679)
.||.+|+++++|||+|+||||++|++|+++|+++||+||||||+||++|++|+++|||+|+|||+|+|++||++||+||+
T Consensus 2 ~~p~~~~~~~~~lnl~lm~wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~ 81 (340)
T 3rui_A 2 SDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYN 81 (340)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCC
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHH
Q 005745 412 LDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLP 491 (679)
Q Consensus 412 ~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li 491 (679)
.+|+ |++||++++++|+++||+++++++..+|||||||+++ +++.+.+.+++.++++++|+||+|+||+++||++
T Consensus 82 ~~di---G~~Ka~aaa~~L~~inP~v~v~~~~~~i~~~g~~~~~--~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~li 156 (340)
T 3rui_A 82 FEDC---GKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVN--EEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLP 156 (340)
T ss_dssp GGGT---TSBHHHHHHHHHHHHCTTCEEEEECCCCCCTTSCCSC--HHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHH
T ss_pred hhhc---ChHHHHHHHHHHHHhCCCCEEEEEeccccccCcccch--hhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHH
Confidence 9999 9999999999999999999999999999999999975 2233455677889999999999999999999999
Q ss_pred HHHHHhcCCeEEEEeeCcceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCcc
Q 005745 492 TLLCANTNKITITAALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTAN 571 (679)
Q Consensus 492 n~~~~~~~kp~I~aalG~~g~vv~~hg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gCY~C~dv~aP~~s~~d 571 (679)
|++|..+++|+|++++||+||++++||.... ..++++|||+|+++++|.++..+
T Consensus 157 n~~c~~~~~plI~aa~G~~G~l~v~~g~~~~--------------------------~~~~~~~Cy~C~~~~~p~~~~~~ 210 (340)
T 3rui_A 157 SLLSNIENKTVINAALGFDSYLVMRHGNRDE--------------------------QSSKQLGCYFCHDVVAPTDSLTD 210 (340)
T ss_dssp HHHHHHTTCEEEEEEECSSEEEEEECCCCCS--------------------------SCCCCBCCGGGGSSSCCCCCTTT
T ss_pred HHHHHHcCCcEEEeeecceEEEEEeeccccc--------------------------CCCCCCCeeeeCCCCCCcccccc
Confidence 9999999999999999999999999975310 12357899999999999999899
Q ss_pred ccccccccccCcchHHHHHHHHHHHHHHHhcCCCccCCCccccCCCCCCCCCCCCCCcchhhhccccccceeEeccCCCC
Q 005745 572 RTLDQQCTVTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQMTLVGHSSN 651 (679)
Q Consensus 572 rtLdq~CtV~~Pgv~~ias~~AvEll~~ll~~~~~~~ap~~~~~~~~~~~~~~~lG~~ph~irg~l~~f~~~~~~~~~~~ 651 (679)
+|+||+|+|++|++++||++||+|+|+.|+|||.+.+ .++++|.+||+|||+..+|+++++.+++++
T Consensus 211 ~t~~~~c~v~~p~vg~igs~qA~E~lk~l~~~~~~~~-------------~~~~~G~l~~~~d~~~~~f~~~~l~~~~~~ 277 (340)
T 3rui_A 211 RTLDQMSTVTRPGVAMMASSLAVELMTSLLQTKYSGS-------------ETTVLGDIPHQIRGFLHNFSILKLETPAYE 277 (340)
T ss_dssp CCCGGGGGCSCHHHHHHHHHHHHHHHHHHTSCCCTTS-------------SEETTEECCSEEEEETTTTEEEEECCBCCT
T ss_pred cccCCCcceecchHHHHHHHHHHHHHHHHhCCCCCcc-------------ccCccCcccEEEecCcCCceEEEecCCCCC
Confidence 9999999999999999999999999999999987532 125789999999999999999999999999
Q ss_pred CCccCCcccccc-ccchhHHHHHHhcCC
Q 005745 652 SCTACCSTVRSD-NSILFYFLNQVLNGV 678 (679)
Q Consensus 652 ~C~aCs~~v~~~-~~~g~~fv~~~~n~~ 678 (679)
+|++||+.|+++ +++||+||++||||+
T Consensus 278 ~C~~C~~~~~~~~~~~~~~~~~~~~~~~ 305 (340)
T 3rui_A 278 HCPACSPKVIEAFTDLGWEFVKKALEHP 305 (340)
T ss_dssp TCTTTCHHHHHHHHHHTHHHHHHHHHCH
T ss_pred CCCCCCHHHHHHHHhCCHHHHHHHhcCc
Confidence 999999999999 999999999999986
No 7
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=2e-41 Score=355.49 Aligned_cols=240 Identities=18% Similarity=0.278 Sum_probs=171.1
Q ss_pred hhhhhhhhcCCchh----HHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCC
Q 005745 345 NLKLMRWRQLPSLN----LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGD 420 (679)
Q Consensus 345 nlry~R~rllp~~g----q~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk 420 (679)
.+-|.||++++++| |++|+++||+|||+||+||++|++|+++|||+|+|+|+|.|+.|||+||+ |+.+|+ |+
T Consensus 13 ~~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~-~~~~di---G~ 88 (292)
T 3h8v_A 13 GLVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLF-FQPHQA---GL 88 (292)
T ss_dssp -------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------CCT---TS
T ss_pred CCCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhccccc-CChhhc---Cc
Confidence 46799999998765 79999999999999999999999999999999999999999999999985 789999 99
Q ss_pred cHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhh-----------ccCCEEEEeCCChHHHH
Q 005745 421 FKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-----------LSHDVIFLLTDTRESRW 489 (679)
Q Consensus 421 ~KAeaaae~L~~inP~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-----------~~~DvV~~~tDs~esR~ 489 (679)
+||++++++|+++||+++++++..++ .+.+++++++ +++|+||+|+||+++|+
T Consensus 89 ~Ka~aa~~~L~~iNP~v~v~~~~~~l----------------~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~ 152 (292)
T 3h8v_A 89 SKVQAAEHTLRNINPDVLFEVHNYNI----------------TTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARM 152 (292)
T ss_dssp BHHHHHHHHHHHHCTTSEEEEECCCT----------------TSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHH
T ss_pred hHHHHHHHHHHhhCCCcEEEEecccC----------------CcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhh
Confidence 99999999999999999999998655 1235566665 68999999999999999
Q ss_pred HHHHHHHhcCCeEEEEe-e--CcceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCC
Q 005745 490 LPTLLCANTNKITITAA-L--GFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPT 566 (679)
Q Consensus 490 lin~~~~~~~kp~I~aa-l--G~~g~vv~~hg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gCY~C~dv~aP~ 566 (679)
++|++|.++++|+|+++ . ++.||+.++. | ++++||+|.....|.
T Consensus 153 ~in~~c~~~~~Pli~~gv~~~~~~Gqv~~~~---p------------------------------g~t~Cy~Cl~p~~~~ 199 (292)
T 3h8v_A 153 TINTACNELGQTWMESGVSENAVSGHIQLII---P------------------------------GESACFACAPPLVVA 199 (292)
T ss_dssp HHHHHHHHHTCCEEEEEECTTSSEEEEEEEC---T------------------------------TTSCCTTSSSCCCCC
T ss_pred HHHHHHHHhCCCEEEeeeecceeEEEEEEEC---C------------------------------CCCCCHhhcCCcccc
Confidence 99999999999999875 3 4899998764 2 357999999543332
Q ss_pred CCCccccccc--ccc-ccCcchHHHHHHHHHHHHHHHhcCCCccCCCccccCCCCCCCCCCCCCCcchhhhcccccccee
Q 005745 567 DSTANRTLDQ--QCT-VTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQM 643 (679)
Q Consensus 567 ~s~~drtLdq--~Ct-V~~Pgv~~ias~~AvEll~~ll~~~~~~~ap~~~~~~~~~~~~~~~lG~~ph~irg~l~~f~~~ 643 (679)
......+.++ .|+ +.+|.+++||++||.|+||.|++.+.. |.+ ..+.+.-.+|+.+
T Consensus 200 ~~~~~~~~~~~gvc~~~l~~~~g~vgslqA~EalK~L~g~g~~--------------------~~l-l~~D~~~~~~~~~ 258 (292)
T 3h8v_A 200 ANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTV--------------------SFY-LGYNAMQDFFPTM 258 (292)
T ss_dssp CC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC--------------------CSE-EEEETTTTBCCEE
T ss_pred ccccccchhhcCcccCCcchHHHHHHHHHHHHHHHHHhCCCCC--------------------CeE-EEEECCCCcEEEE
Confidence 2211122211 342 478999999999999999999986431 221 3566777778877
Q ss_pred EeccCCCCCCc--cCCccc
Q 005745 644 TLVGHSSNSCT--ACCSTV 660 (679)
Q Consensus 644 ~~~~~~~~~C~--aCs~~v 660 (679)
++. +.++|+ +|+..-
T Consensus 259 ~~~--~~p~C~~~~Cg~~~ 275 (292)
T 3h8v_A 259 SMK--PNPQCDDRNCRKQQ 275 (292)
T ss_dssp CCC--CCTTCSCHHHHHHH
T ss_pred ecC--CCcCcCccccCCch
Confidence 774 789999 999754
No 8
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=100.00 E-value=4.2e-40 Score=338.42 Aligned_cols=234 Identities=25% Similarity=0.365 Sum_probs=191.9
Q ss_pred hhhhhhhhcCCchh---HHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCc
Q 005745 345 NLKLMRWRQLPSLN---LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDF 421 (679)
Q Consensus 345 nlry~R~rllp~~g---q~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~ 421 (679)
..||.||+++|++| |++|++++|+|+|+||+|+++|++|+++||++|+|+|.|.|+.+||+||++|+.+|+ |++
T Consensus 6 ~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~di---G~~ 82 (251)
T 1zud_1 6 FMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDI---DRP 82 (251)
T ss_dssp HHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGT---TSB
T ss_pred HHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhC---CCH
Confidence 36899999987765 899999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCe
Q 005745 422 KAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKI 501 (679)
Q Consensus 422 KAeaaae~L~~inP~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp 501 (679)
||++++++|+++||+++++.+...+ +.+++.++++++|+||+|+|+.++|++++++|.++++|
T Consensus 83 Ka~~~~~~l~~~np~~~v~~~~~~~-----------------~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p 145 (251)
T 1zud_1 83 KSQVSQQRLTQLNPDIQLTALQQRL-----------------TGEALKDAVARADVVLDCTDNMATRQEINAACVALNTP 145 (251)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCC-----------------CHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccC-----------------CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999987544 55778889999999999999999999999999999999
Q ss_pred EEEE-eeCcceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCcccccccccc-
Q 005745 502 TITA-ALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQCT- 579 (679)
Q Consensus 502 ~I~a-alG~~g~vv~~hg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gCY~C~dv~aP~~s~~drtLdq~Ct- 579 (679)
+|++ +.|+.|+++++. | ....+||+|.....|.. .+.|.
T Consensus 146 ~i~~~~~g~~G~v~~~~---p-----------------------------~~~~~c~~cl~~~~~~~-------~~~~~~ 186 (251)
T 1zud_1 146 LITASAVGFGGQLMVLT---P-----------------------------PWEQGCYRCLWPDNQEP-------ERNCRT 186 (251)
T ss_dssp EEEEEEEBTEEEEEEEC---T-----------------------------TCTTCCHHHHCC------------------
T ss_pred EEEEeccccceEEEEEc---c-----------------------------CCCCCcEEEeCCCCCCC-------CCcccc
Confidence 9997 689999998764 2 11368999985322211 13454
Q ss_pred --ccCcchHHHHHHHHHHHHHHHhcCCCccCCCccccCCCCCCCCCCCCCCcchhhhccccccceeEeccCCCCCCccCC
Q 005745 580 --VTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQMTLVGHSSNSCTACC 657 (679)
Q Consensus 580 --V~~Pgv~~ias~~AvEll~~ll~~~~~~~ap~~~~~~~~~~~~~~~lG~~ph~irg~l~~f~~~~~~~~~~~~C~aCs 657 (679)
+.+|.++++|+++|.|+|+.|++.+.. +|.+ ..+.+.-..|+.+.+ ++.++|++|+
T Consensus 187 ~g~~~p~~~~~g~~~A~e~lk~l~g~~~~-------------------~~~~-~~~d~~~~~~~~~~~--~~~p~C~~C~ 244 (251)
T 1zud_1 187 AGVVGPVVGVMGTLQALEAIKLLSGIETP-------------------AGEL-RLFDGKSSQWRSLAL--RRASGCPVCG 244 (251)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHTCCCC-------------------CSEE-EEEETTTTEEEEEEC--CCCTTCTTTC
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhCCCCc-------------------CCcE-EEEECCCCEEEEEec--CCCcCCCccC
Confidence 789999999999999999999976421 1221 234444445555444 5789999999
Q ss_pred cc
Q 005745 658 ST 659 (679)
Q Consensus 658 ~~ 659 (679)
..
T Consensus 245 ~~ 246 (251)
T 1zud_1 245 GS 246 (251)
T ss_dssp C-
T ss_pred CC
Confidence 64
No 9
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=100.00 E-value=1.6e-38 Score=326.11 Aligned_cols=233 Identities=26% Similarity=0.342 Sum_probs=190.9
Q ss_pred hhhhhhhcCCchh---HHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcH
Q 005745 346 LKLMRWRQLPSLN---LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFK 422 (679)
Q Consensus 346 lry~R~rllp~~g---q~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~K 422 (679)
.||+||+.+|++| |++|++++|+|+|+||+|+++|++|+++||++|+|+|.|.|+.+||+||++|+.+|+ |++|
T Consensus 10 ~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~di---G~~K 86 (249)
T 1jw9_B 10 LRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATV---GQPK 86 (249)
T ss_dssp HHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGT---TSBH
T ss_pred HHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhc---CcHH
Confidence 5899999997765 899999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeE
Q 005745 423 AMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKIT 502 (679)
Q Consensus 423 Aeaaae~L~~inP~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~ 502 (679)
+++++++|+++||+++++.+...+ +.+++.++++++|+||+|+|+.++|++++++|.++++|+
T Consensus 87 a~~~~~~l~~~np~~~v~~~~~~~-----------------~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~ 149 (249)
T 1jw9_B 87 VESARDALTRINPHIAITPVNALL-----------------DDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPL 149 (249)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCC-----------------CHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHCCCcEEEEEeccC-----------------CHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCE
Confidence 999999999999999999987543 446778889999999999999999999999999999999
Q ss_pred EEE-eeCcceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCccccccccc---
Q 005745 503 ITA-ALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQC--- 578 (679)
Q Consensus 503 I~a-alG~~g~vv~~hg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gCY~C~dv~aP~~s~~drtLdq~C--- 578 (679)
|++ ..|+.|++.++. | +...+||+|.. |..... .+.|
T Consensus 150 i~~~~~g~~g~v~~~~---p-----------------------------~~~~~c~~c~~---~~~~~~----~~~c~~~ 190 (249)
T 1jw9_B 150 VSGAAIRMEGQITVFT---Y-----------------------------QDGEPCYRCLS---RLFGEN----ALTCVEA 190 (249)
T ss_dssp EEEEEEBTEEEEEEEC---C-----------------------------CTTCCCTHHHH---TTCCC-----------C
T ss_pred EEeeeccceEEEEEEe---C-----------------------------CCCCCceEEEC---CCCCcc----ccccccc
Confidence 997 589999998764 2 11268999984 322111 2346
Q ss_pred cccCcchHHHHHHHHHHHHHHHhcCCCccCCCccccCCCCCCCCCCCCCCcchhhhccccccceeEeccCCCCCCccCCc
Q 005745 579 TVTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQMTLVGHSSNSCTACCS 658 (679)
Q Consensus 579 tV~~Pgv~~ias~~AvEll~~ll~~~~~~~ap~~~~~~~~~~~~~~~lG~~ph~irg~l~~f~~~~~~~~~~~~C~aCs~ 658 (679)
.+.+|.++++|+.+|.|+|+.|++.+... .|.+ ..+.+.-..|+.+.+ ++.++|++|+.
T Consensus 191 g~~~~~~~~~g~~~a~e~lk~l~g~~~~~------------------~~~~-~~~d~~~~~~~~~~~--~~~~~C~~C~~ 249 (249)
T 1jw9_B 191 GVMAPLIGVIGSLQAMEAIKMLAGYGKPA------------------SGKI-VMYDAMTCQFREMKL--MRNPGCEVCGQ 249 (249)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHTCSCCC------------------BSEE-EEEETTTTEEEEEEC--CCCTTCTTTC-
T ss_pred CCcchHHHHHHHHHHHHHHHHHhCCCCCc------------------cCeE-EEEECCCCEEEEEec--CCCcCCCCcCc
Confidence 48899999999999999999999864311 1111 133444444555554 57899999984
No 10
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=100.00 E-value=1.5e-38 Score=342.15 Aligned_cols=242 Identities=20% Similarity=0.231 Sum_probs=185.7
Q ss_pred hhhhhhhhcC---Cch---h-HHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccC
Q 005745 345 NLKLMRWRQL---PSL---N-LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLN 417 (679)
Q Consensus 345 nlry~R~rll---p~~---g-q~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~ 417 (679)
..||+||+++ +++ + |++|++++|+|||+||+||++|++|+++|||+|+|+|+|.|+.+|++||++|+.+|+
T Consensus 92 ~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~di-- 169 (353)
T 3h5n_A 92 NNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDV-- 169 (353)
T ss_dssp TSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGT--
T ss_pred HHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHC--
Confidence 5799999753 333 3 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhh-HHHhhccCCEEEEeCCChH-HHHHHHHHH
Q 005745 418 GGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRR-LTDLILSHDVIFLLTDTRE-SRWLPTLLC 495 (679)
Q Consensus 418 ~Gk~KAeaaae~L~~inP~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~-l~~li~~~DvV~~~tDs~e-sR~lin~~~ 495 (679)
|++||++++++|+++||+++++++...+ +.++ +.+ ++++|+||+|+|+.+ +|+++|++|
T Consensus 170 -G~~Ka~~~~~~l~~~np~v~v~~~~~~i-----------------~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c 230 (353)
T 3h5n_A 170 -GKNKTEVIKRELLKRNSEISVSEIALNI-----------------NDYTDLHK-VPEADIWVVSADHPFNLINWVNKYC 230 (353)
T ss_dssp -TSBHHHHHHHHHHHHCTTSEEEEEECCC-----------------CSGGGGGG-SCCCSEEEECCCCSTTHHHHHHHHH
T ss_pred -CChHHHHHHHHHHHHCCCCeEEEeeccc-----------------CchhhhhH-hccCCEEEEecCChHHHHHHHHHHH
Confidence 9999999999999999999999998755 2233 455 899999999999999 999999999
Q ss_pred HhcCCeEEEE-eeCcceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCccccc
Q 005745 496 ANTNKITITA-ALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTL 574 (679)
Q Consensus 496 ~~~~kp~I~a-alG~~g~vv~~hg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gCY~C~dv~aP~~s~~drtL 574 (679)
+++++|+|++ ..|+.|++.... .+++++||+|.+...+.....++..
T Consensus 231 ~~~~~p~i~~~~~g~~g~~g~~~--------------------------------~p~~~~C~~C~~~~~~~~~~~~~~~ 278 (353)
T 3h5n_A 231 VRANQPYINAGYVNDIAVFGPLY--------------------------------VPGKTGCYECQKVVADLYGSEKENI 278 (353)
T ss_dssp HHTTCCEEEEEEETTEEEEEEEE--------------------------------CTTTSCCTTTTC---------CHHH
T ss_pred HHhCCCEEEEEEeCCEEEEEEEE--------------------------------cCCCCCChhhcCCCcCCCccccchh
Confidence 9999999997 468877764321 0246899999965322111111112
Q ss_pred cccc---------cccCcchHHHHHHHHHHHHHHHhcCCCccCCCccccCCCCCCCCCCCCCCcchhhhccccccceeEe
Q 005745 575 DQQC---------TVTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQMTL 645 (679)
Q Consensus 575 dq~C---------tV~~Pgv~~ias~~AvEll~~ll~~~~~~~ap~~~~~~~~~~~~~~~lG~~ph~irg~l~~f~~~~~ 645 (679)
++.| .|.+|.++++|+++|.|+||.|++.+.. ...|.+ ..+.+. +++...+
T Consensus 279 ~~~c~~~~~~~~~gv~~~~~~iig~l~a~Ealk~l~g~~~~-----------------~~~g~l-~~~d~~--~~~~~~~ 338 (353)
T 3h5n_A 279 DHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIGKYSEP-----------------LSLNKR-IGIWSD--EIKIHSQ 338 (353)
T ss_dssp HHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHCSSCC-----------------TTBTEE-EEECSS--SSCEEEE
T ss_pred hhhhhhhcccccCCchhhHHHHHHHHHHHHHHHHhcCCCCc-----------------ccCCeE-EEEECC--CCEEEEE
Confidence 2333 3789999999999999999999875321 012221 123333 3344445
Q ss_pred ccCCCCCCccCCcc
Q 005745 646 VGHSSNSCTACCST 659 (679)
Q Consensus 646 ~~~~~~~C~aCs~~ 659 (679)
.-.+.++|++|+.+
T Consensus 339 ~~~~~p~C~~Cg~~ 352 (353)
T 3h5n_A 339 NMGRSPVCSVCGNR 352 (353)
T ss_dssp ECCCCTTCTTTC--
T ss_pred ccCCCcCCCCCCCC
Confidence 55688999999974
No 11
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=2.4e-34 Score=316.87 Aligned_cols=137 Identities=24% Similarity=0.246 Sum_probs=126.5
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
..|+++||+||||||+||++|++|+++|||+|+|+|+|.|+.|||+||+||+.+|+ |++||++|+++|+++||++++
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~di---G~~Ka~~a~~~l~~lnp~v~v 112 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI---GRPKAEVAAEFLNDRVPNCNV 112 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGT---TSBHHHHHHHHHHHHSTTCCC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHc---CcHHHHHHHHHHHhhCCCCEE
Confidence 56699999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhc------------CCeEEEE-e
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANT------------NKITITA-A 506 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~------------~kp~I~a-a 506 (679)
+++...+ +..+ .++++++|+||+|+||.++|+++|++|..+ ++|+|++ .
T Consensus 113 ~~~~~~i-----------------~~~~-~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~iPli~~~~ 174 (434)
T 1tt5_B 113 VPHFNKI-----------------QDFN-DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGT 174 (434)
T ss_dssp EEEESCG-----------------GGBC-HHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGCCCEEEEEE
T ss_pred EEEeccc-----------------chhh-HHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccCCcEEEecc
Confidence 9998655 2223 478899999999999999999999999874 9999997 5
Q ss_pred eCcceEEEEEc
Q 005745 507 LGFDSFLVMRH 517 (679)
Q Consensus 507 lG~~g~vv~~h 517 (679)
.|+.||+.++.
T Consensus 175 ~g~~G~v~v~~ 185 (434)
T 1tt5_B 175 EGFKGNARVIL 185 (434)
T ss_dssp ETTEEEEEEEC
T ss_pred ccceeEEEEEC
Confidence 89999998764
No 12
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=100.00 E-value=1.9e-32 Score=322.17 Aligned_cols=138 Identities=25% Similarity=0.263 Sum_probs=127.3
Q ss_pred HHhh-cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCc
Q 005745 359 LDIL-SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAV 437 (679)
Q Consensus 359 q~kL-~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v 437 (679)
|+++ +++||+|||||||||++|++|+++|||+|+|||.|+|+.|||+||+||+.+|+ |++||++++++|+++||++
T Consensus 405 ~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~v---g~~Ka~~~~~~l~~~np~~ 481 (805)
T 2nvu_B 405 LQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI---GRPKAEVAAEFLNDRVPNC 481 (805)
T ss_dssp HHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGT---TSBHHHHHHHHHHHHSTTC
T ss_pred HHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhc---CChHHHHHHHHHHHHCCCC
Confidence 5665 99999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred EEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhc------------CCeEEEE
Q 005745 438 AAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANT------------NKITITA 505 (679)
Q Consensus 438 ~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~------------~kp~I~a 505 (679)
+|+++...| +..+ .++++++|+||+|+||.++|+++|++|..+ ++|+|++
T Consensus 482 ~v~~~~~~~-----------------~~~~-~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i~~ 543 (805)
T 2nvu_B 482 NVVPHFNKI-----------------QDFN-DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDG 543 (805)
T ss_dssp EEEEEESCG-----------------GGSC-HHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEEE
T ss_pred EEEEEeccc-----------------cccH-HHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEEEe
Confidence 999998655 2223 478899999999999999999999999874 9999997
Q ss_pred -eeCcceEEEEEc
Q 005745 506 -ALGFDSFLVMRH 517 (679)
Q Consensus 506 -alG~~g~vv~~h 517 (679)
..|+.|++.++.
T Consensus 544 ~~~g~~G~~~~~~ 556 (805)
T 2nvu_B 544 GTEGFKGNARVIL 556 (805)
T ss_dssp EEETTEEEEEEEC
T ss_pred ccccCceeEEEEC
Confidence 689999998774
No 13
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=99.98 E-value=9.1e-32 Score=306.96 Aligned_cols=194 Identities=20% Similarity=0.279 Sum_probs=163.5
Q ss_pred cCCchhHHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHh
Q 005745 353 QLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLER 432 (679)
Q Consensus 353 llp~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~ 432 (679)
+++..+|++|++++|+|||||||||++|++|+++|||+|+|+|.|.|+.|||+||+||+.+|+ |++||++|+++|++
T Consensus 6 l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dV---Gk~KAeaaa~~L~~ 82 (640)
T 1y8q_B 6 GLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHV---GRSKAQVAKESVLQ 82 (640)
T ss_dssp CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGT---TSBHHHHHHHHHHT
T ss_pred hcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHc---ChHHHHHHHHHHHH
Confidence 456667999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred hCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEE-eeCcce
Q 005745 433 IFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA-ALGFDS 511 (679)
Q Consensus 433 inP~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~a-alG~~g 511 (679)
+||+++|+++...+ + ......++++++|+||+|+|+.++|++++++|+.+++|+|.+ ..|+.|
T Consensus 83 iNP~v~V~a~~~~i-------~---------~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G 146 (640)
T 1y8q_B 83 FYPKANIVAYHDSI-------M---------NPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLG 146 (640)
T ss_dssp TCTTCEEEEEESCT-------T---------STTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTEE
T ss_pred HCCCCeEEEEeccc-------c---------hhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecccc
Confidence 99999999998655 1 111235788999999999999999999999999999999987 589999
Q ss_pred EEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCcccccccccccc-CcchHHHHH
Q 005745 512 FLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQCTVT-RPGLAPIAS 590 (679)
Q Consensus 512 ~vv~~hg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gCY~C~dv~aP~~s~~drtLdq~CtV~-~Pgv~~ias 590 (679)
++.+.. | +.++||+|... .|.. -.+.||+. .|.....+.
T Consensus 147 ~v~vi~---p------------------------------~~t~Cy~C~~~-p~~~------~~p~Cti~~~p~~~~hci 186 (640)
T 1y8q_B 147 QVTTIK---K------------------------------GVTECYECHPK-PTQR------TFPGATIRNTPSEPIHCI 186 (640)
T ss_dssp EEEEEC---T------------------------------TTSCCTTSSCC-CCCC------CCCTTTTTSCCCSHHHHH
T ss_pred eEEEEC---C------------------------------CCCCCcccCCC-CCCc------ccceeeecCCCCchHHHH
Confidence 998764 2 35799999742 1111 12579853 344444444
Q ss_pred HHHHHHHHHHhcCCC
Q 005745 591 ALAVELFVGVLHHPK 605 (679)
Q Consensus 591 ~~AvEll~~ll~~~~ 605 (679)
.+|.|+++.|++++.
T Consensus 187 ~~a~~~f~~lf~~~~ 201 (640)
T 1y8q_B 187 VWAKYLFNQLFGEED 201 (640)
T ss_dssp HHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHhCCcc
Confidence 589999999998753
No 14
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.8e-32 Score=324.48 Aligned_cols=235 Identities=19% Similarity=0.218 Sum_probs=189.6
Q ss_pred ccccceEec---CCcccceE----ecccCCCCh---hhhhhh-hhhhhhhhhhhhcC-CchhHHhhcCCeEEEEcCChHH
Q 005745 309 PNTVGWELN---KGRKVPRC----ISLAKSMDP---TRLAIS-AADLNLKLMRWRQL-PSLNLDILSSRKCLLLGAGTLG 376 (679)
Q Consensus 309 ~~~~gwe~~---~Gkl~p~~----~dl~~~~dp---~~la~~-~~dlnlry~R~rll-p~~gq~kL~~~kVlIvGaGgLG 376 (679)
.+++++|.- +||..|.. +|--.+... ..+.++ ....+.||+||+.+ +..+|++|+++||+||||||||
T Consensus 358 GGivAQEVIKaiT~kf~Pi~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Ry~rq~~l~G~~~q~kL~~~~VlvVGaGGlG 437 (1015)
T 3cmm_A 358 GGLVAQEVLKACSGKFTPLKQFMYFDSLESLPDPKNFPRNEKTTQPVNSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIG 437 (1015)
T ss_dssp HHHHHHHHHHHHHCBSCCCCSEEEEECGGGSCCTTTSCCSTTTTSCCSSTTHHHHHHHCHHHHHHHHTCEEEEECCSHHH
T ss_pred cchHHHHHHHHhccCCCcccceEEecchhhccccccCCCChhhccchhhhhhhHHHhcCHHHHHHHhcCeEEEEecCHHH
Confidence 356788853 89999964 554333321 112222 12346899999855 5556999999999999999999
Q ss_pred HHHHHHHHHcCC-----CEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCc--EEEEEecccCCC
Q 005745 377 CQVARMLMAWGV-----RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAV--AAEGVVMAIPMP 449 (679)
Q Consensus 377 s~VA~~La~~GV-----g~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v--~v~~~~~~Ipm~ 449 (679)
|+++++|+++|| |+|+|+|.|+|+.|||+||+||+.+|+ |++||++|+++|+++||++ +|+++...|
T Consensus 438 sevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dv---G~~Ka~~aa~~l~~iNP~v~~~v~~~~~~i--- 511 (1015)
T 3cmm_A 438 CEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDV---GKNKSEVAAEAVCAMNPDLKGKINAKIDKV--- 511 (1015)
T ss_dssp HHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGT---TSBHHHHHHHHHHHHCGGGTTTEEEECCCC---
T ss_pred HHHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccCChhhC---CCHHHHHHHHHHHHHCCCCcceEEEEeccc---
Confidence 999999999999 999999999999999999999999999 9999999999999999999 999998765
Q ss_pred CCCCCCccccccccChhhH----HHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEE-eeCcceEEEEEcCCCCCcc
Q 005745 450 GHPVPCQEEDSVLDDCRRL----TDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA-ALGFDSFLVMRHGPGPFSI 524 (679)
Q Consensus 450 gh~~~~~~~~~~~~~~~~l----~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~a-alG~~g~vv~~hg~~~~~~ 524 (679)
+.++. .++++++|+||+|+||.++|++++++|..+++|+|++ ..|+.|++.++. |
T Consensus 512 --------------~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~~g~~G~~G~v~v~~---p--- 571 (1015)
T 3cmm_A 512 --------------GPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLESGTLGTKGNTQVII---P--- 571 (1015)
T ss_dssp --------------SGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEEC---T---
T ss_pred --------------CchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEEeCCCccccceEEEe---C---
Confidence 22221 5788999999999999999999999999999999997 589999987653 2
Q ss_pred cccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCccccccccccccC-cchHHHHHHHHHHHHHHHhcC
Q 005745 525 THDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQCTVTR-PGLAPIASALAVELFVGVLHH 603 (679)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gCY~C~dv~aP~~s~~drtLdq~CtV~~-Pgv~~ias~~AvEll~~ll~~ 603 (679)
+.++||.|.. .|.. ...+.||+.. |.....+...|.+++..|+++
T Consensus 572 ---------------------------~~t~cy~c~~--dp~~-----~~~P~Ctl~~~P~~~~h~i~wa~~~f~~lf~~ 617 (1015)
T 3cmm_A 572 ---------------------------RLTESYSSSR--DPPE-----KSIPLCTLRSFPNKIDHTIAWAKSLFQGYFTD 617 (1015)
T ss_dssp ---------------------------TTBCCGGGSC--CCCC-----CCCCHHHHHTCCCSHHHHHHHHHHHHHHHHTH
T ss_pred ---------------------------CCCCccCCCC--CCCC-----CCCCcccccCCCCCcHHHHHHHHHHHHHHHhh
Confidence 3578999982 2211 1236899654 888888999999988777664
No 15
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=99.97 E-value=3.2e-31 Score=284.36 Aligned_cols=153 Identities=21% Similarity=0.305 Sum_probs=140.5
Q ss_pred hhhhhhhhcC-CchhHHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHH
Q 005745 345 NLKLMRWRQL-PSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKA 423 (679)
Q Consensus 345 nlry~R~rll-p~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KA 423 (679)
..||+||+.+ +..+|++|++++|+|+|+||+||++|++|+++|||+|+|+|+|.|+.+||+||++|+.+|+ |++||
T Consensus 16 ~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~di---G~~Ka 92 (346)
T 1y8q_A 16 AAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSV---GRNRA 92 (346)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCT---TSBHH
T ss_pred HHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccC---cCCHH
Confidence 4689999744 5557999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEE
Q 005745 424 MAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITI 503 (679)
Q Consensus 424 eaaae~L~~inP~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I 503 (679)
++++++|+++||+++++.+...+ + ++..++++++|+||+|+|+.++|++++.+|+.+++|+|
T Consensus 93 ~~~~~~l~~lnp~v~v~~~~~~~-----------------~-~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i 154 (346)
T 1y8q_A 93 EASLERAQNLNPMVDVKVDTEDI-----------------E-KKPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFF 154 (346)
T ss_dssp HHHHHHHHHTCTTSEEEEECSCG-----------------G-GCCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhHCCCeEEEEEeccc-----------------C-cchHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEE
Confidence 99999999999999999987644 1 13467889999999999999999999999999999999
Q ss_pred EE-eeCcceEEEEEcC
Q 005745 504 TA-ALGFDSFLVMRHG 518 (679)
Q Consensus 504 ~a-alG~~g~vv~~hg 518 (679)
.+ ..|+.|++++..|
T Consensus 155 ~~~~~G~~G~v~~d~~ 170 (346)
T 1y8q_A 155 TGDVFGYHGYTFANLG 170 (346)
T ss_dssp EEEEEBTEEEEEEECS
T ss_pred EEeecccEEEEEEecC
Confidence 97 6899999988765
No 16
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=99.97 E-value=2.2e-32 Score=308.10 Aligned_cols=214 Identities=13% Similarity=0.054 Sum_probs=172.8
Q ss_pred hhhhhhhhhhhcC-CchhHHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCC
Q 005745 342 ADLNLKLMRWRQL-PSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGD 420 (679)
Q Consensus 342 ~dlnlry~R~rll-p~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk 420 (679)
.|.+.||+||+.+ +..+|++|++++|+|||||||||++|++|+++|||+|+|+|.|.|+.+||+||++|+.+|+ |+
T Consensus 9 id~~~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dv---G~ 85 (531)
T 1tt5_A 9 LLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSI---GK 85 (531)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGB---TS
T ss_pred ccHHHHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhc---Cc
Confidence 3446799999865 3446999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCC
Q 005745 421 FKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNK 500 (679)
Q Consensus 421 ~KAeaaae~L~~inP~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~k 500 (679)
+||++++++|+++||+++++.+...+ ....++..++++++|+||+|+|+.++|++++++|+.+++
T Consensus 86 ~Ka~~a~~~l~~lNp~v~v~~~~~~~---------------~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~i 150 (531)
T 1tt5_A 86 NRAEAAMEFLQELNSDVSGSFVEESP---------------ENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQI 150 (531)
T ss_dssp BHHHHHHHHHHTTCTTSBCCEESSCH---------------HHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCCc---------------chhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCC
Confidence 99999999999999999999987433 000123457889999999999999999999999999999
Q ss_pred eEEEE-eeCcceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCccccccccc-
Q 005745 501 ITITA-ALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQC- 578 (679)
Q Consensus 501 p~I~a-alG~~g~vv~~hg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gCY~C~dv~aP~~s~~drtLdq~C- 578 (679)
|+|++ ..|+.|++.+..+.... + ...+....+||+|..+..+ .+. .-+.|
T Consensus 151 plI~~~~~G~~G~v~~~~p~~~~--------------------~---d~~~~~~~~~lr~~~p~P~---~~~--~~~~~~ 202 (531)
T 1tt5_A 151 PLLICRTYGLVGYMRIIIKEHPV--------------------I---ESHPDNALEDLRLDKPFPE---LRE--HFQSYD 202 (531)
T ss_dssp CEEEEEEETTEEEEEEECSCEEE--------------------S---CCCCSSCCCCCCSSSCCHH---HHH--HHHTCC
T ss_pred CEEEEEecCCeEEEEEEcCCcee--------------------c---cCCCCCCCCcccccCCCCC---chh--hhhccC
Confidence 99997 68999999988752110 0 0011235789999944322 111 00122
Q ss_pred ------cccCcchHHHHHHHHHHHHHHHh
Q 005745 579 ------TVTRPGLAPIASALAVELFVGVL 601 (679)
Q Consensus 579 ------tV~~Pgv~~ias~~AvEll~~ll 601 (679)
.+.++..+++++.+|.|.++.+.
T Consensus 203 ~~~~~~~~~~~~p~vv~~~~ale~~k~~~ 231 (531)
T 1tt5_A 203 LDHMEKKDHSHTPWIVIIAKYLAQWYSET 231 (531)
T ss_dssp -------CGGGSCHHHHHHHHHHHHTTTT
T ss_pred cccccCCCcCCchHHHHHHHHHHHHHHhc
Confidence 35678899999999999998765
No 17
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.9e-28 Score=287.38 Aligned_cols=148 Identities=16% Similarity=0.175 Sum_probs=136.2
Q ss_pred hhhhhhhhcC-CchhHHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHH
Q 005745 345 NLKLMRWRQL-PSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKA 423 (679)
Q Consensus 345 nlry~R~rll-p~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KA 423 (679)
..||+||+.+ +..+|++|++++|+|||+|||||++|++|+++|||+|+|+|+|.|+.+||+||++++.+|+ |++||
T Consensus 7 ~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dv---G~~Ka 83 (1015)
T 3cmm_A 7 ESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDI---GQKRG 83 (1015)
T ss_dssp HHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGT---TSBHH
T ss_pred hHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhc---ChHHH
Confidence 3579999754 5567999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC-ChHHHHHHHHHHHhcCCeE
Q 005745 424 MAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD-TRESRWLPTLLCANTNKIT 502 (679)
Q Consensus 424 eaaae~L~~inP~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD-s~esR~lin~~~~~~~kp~ 502 (679)
++++++|+++||+++++++...+ +. ++++++|+||+|+| +.++|+.++++|+.+++|+
T Consensus 84 ~a~~~~L~~lNP~v~v~~~~~~l-----------------~~----~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~ipl 142 (1015)
T 3cmm_A 84 DVTRAKLAELNAYVPVNVLDSLD-----------------DV----TQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRF 142 (1015)
T ss_dssp HHHHHHHTTSCTTSCEEECCCCC-----------------CS----TTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHCCCCeEEEecCCC-----------------CH----HHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCE
Confidence 99999999999999999987543 11 47889999999999 9999999999999999999
Q ss_pred EEE-eeCcceEEEEE
Q 005745 503 ITA-ALGFDSFLVMR 516 (679)
Q Consensus 503 I~a-alG~~g~vv~~ 516 (679)
|.+ ..|+.|++++.
T Consensus 143 I~~~~~G~~G~v~~d 157 (1015)
T 3cmm_A 143 ISSETRGLFGNTFVD 157 (1015)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred EEEEecccEEEEEec
Confidence 997 68999999764
No 18
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=98.05 E-value=8.9e-06 Score=84.76 Aligned_cols=80 Identities=26% Similarity=0.306 Sum_probs=67.0
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
.+++++|+|+|+||+|..++..|+..|+++|++++.+ ..|++.+++.+...+|.+++.
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~----------------------~~~a~~la~~~~~~~~~~~i~ 181 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD----------------------TSRAQALADVINNAVGREAVV 181 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS----------------------HHHHHHHHHHHHHHHTSCCEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC----------------------HHHHHHHHHHHHhhcCCceEE
Confidence 4678999999999999999999999999999998763 348899999999888887776
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (679)
.+. .+++.+.+.++|+||+||-
T Consensus 182 ~~~---------------------~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 182 GVD---------------------ARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp EEC---------------------STTHHHHHHHSSEEEECSS
T ss_pred EcC---------------------HHHHHHHHhcCCEEEECCC
Confidence 653 2345667889999999985
No 19
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.82 E-value=7.3e-05 Score=79.10 Aligned_cols=85 Identities=18% Similarity=0.161 Sum_probs=66.1
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
.+++++|+|+|+||+|..++..|+..|+++|++++.+. + -..|++.+++.+.+..+ +.+.
T Consensus 151 ~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~--------------~-----~~~~a~~la~~~~~~~~-~~~~ 210 (315)
T 3tnl_A 151 DIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD--------------D-----FYANAEKTVEKINSKTD-CKAQ 210 (315)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS--------------T-----THHHHHHHHHHHHHHSS-CEEE
T ss_pred CccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC--------------c-----hHHHHHHHHHHhhhhcC-CceE
Confidence 36789999999999999999999999999999987631 0 13488888888887664 5555
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (679)
.... .+.+.+.+.+.++|+||.||-
T Consensus 211 ~~~~------------------~~~~~l~~~l~~aDiIINaTp 235 (315)
T 3tnl_A 211 LFDI------------------EDHEQLRKEIAESVIFTNATG 235 (315)
T ss_dssp EEET------------------TCHHHHHHHHHTCSEEEECSS
T ss_pred Eecc------------------chHHHHHhhhcCCCEEEECcc
Confidence 5442 134556777889999999885
No 20
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.80 E-value=0.00017 Score=62.77 Aligned_cols=95 Identities=14% Similarity=0.066 Sum_probs=67.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~ 443 (679)
.++|+|+|+|++|..+++.|...|..+++++|.+ ..|.+.+. .+++.+. .
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~----------------------~~~~~~~~------~~~~~~~--~ 54 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD----------------------LAALAVLN------RMGVATK--Q 54 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC----------------------HHHHHHHH------TTTCEEE--E
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC----------------------HHHHHHHH------hCCCcEE--E
Confidence 4689999999999999999999997789998863 11232222 2344443 2
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEE
Q 005745 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (679)
Q Consensus 444 ~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~a 505 (679)
.++ .+.+.+.+.++++|+||.++..... ..+...|.+.++++++.
T Consensus 55 ~d~----------------~~~~~~~~~~~~~d~vi~~~~~~~~-~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 55 VDA----------------KDEAGLAKALGGFDAVISAAPFFLT-PIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp CCT----------------TCHHHHHHHTTTCSEEEECSCGGGH-HHHHHHHHHTTCEEECC
T ss_pred ecC----------------CCHHHHHHHHcCCCEEEECCCchhh-HHHHHHHHHhCCCEEEe
Confidence 222 2456777888999999999965443 45666788889988864
No 21
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.61 E-value=0.00022 Score=75.29 Aligned_cols=85 Identities=21% Similarity=0.216 Sum_probs=63.4
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
+++++|+|+|+||.|..++..|+..|+++|++++.+ .+ ...|++.+++.+.+..+ ..+..
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt--------------~~-----~~~~a~~la~~~~~~~~-~~v~~ 205 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK--------------DD-----FFEKAVAFAKRVNENTD-CVVTV 205 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS--------------ST-----HHHHHHHHHHHHHHHSS-CEEEE
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC--------------Cc-----hHHHHHHHHHHhhhccC-cceEE
Confidence 678999999999999999999999999999998762 00 13478888888887653 44554
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCC
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (679)
+.. .+.+.+.+.+.++|+||.||-.
T Consensus 206 ~~~------------------~~l~~~~~~l~~~DiIINaTp~ 230 (312)
T 3t4e_A 206 TDL------------------ADQHAFTEALASADILTNGTKV 230 (312)
T ss_dssp EET------------------TCHHHHHHHHHHCSEEEECSST
T ss_pred ech------------------HhhhhhHhhccCceEEEECCcC
Confidence 431 1222345667889999998864
No 22
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.38 E-value=0.00076 Score=73.34 Aligned_cols=101 Identities=20% Similarity=0.159 Sum_probs=72.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcC-C-CEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWG-V-RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~G-V-g~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
+||+|+|+|++|..+++.|++.| + .+++++|.+ ..|++.+++.+....+ .++..+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~----------------------~~~~~~la~~l~~~~~-~~~~~~ 58 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRT----------------------LSKCQEIAQSIKAKGY-GEIDIT 58 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC----------------------HHHHHHHHHHHHHTTC-CCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECC----------------------HHHHHHHHHHhhhhcC-CceEEE
Confidence 48999999999999999999998 4 689998762 3366777777665431 223344
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhcc--CCEEEEeCCChHHHHHHHHHHHhcCCeEEEE
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILS--HDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~--~DvV~~~tDs~esR~lin~~~~~~~kp~I~a 505 (679)
..++ .+.+.+.+++++ .|+||.++.... ..-+...|.+.++.+|+.
T Consensus 59 ~~D~----------------~d~~~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 59 TVDA----------------DSIEELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp ECCT----------------TCHHHHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEEES
T ss_pred EecC----------------CCHHHHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEEEe
Confidence 3332 245677778877 899999987544 345567788888888863
No 23
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.35 E-value=0.00049 Score=71.19 Aligned_cols=57 Identities=26% Similarity=0.436 Sum_probs=49.6
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
+++++|+|+|+||.+..++..|+..|+++|++++. -..|++.+++.+...+|...+.
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nR----------------------t~~ra~~la~~~~~~~~~~~~~ 179 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDP----------------------STARMGAVCELLGNGFPGLTVS 179 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS----------------------CHHHHHHHHHHHHHHCTTCEEE
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCC----------------------CHHHHHHHHHHHhccCCcceeh
Confidence 56789999999999999999999999999999864 2348999999999988877654
No 24
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.33 E-value=0.00046 Score=73.63 Aligned_cols=93 Identities=12% Similarity=0.106 Sum_probs=65.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~ 443 (679)
+.||+|+|||.+|..+|+.|+.- ..++++|.+ ..|++.+ .+.+. .+.
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~----------------------~~~~~~~-------~~~~~--~~~ 62 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN----------------------NENLEKV-------KEFAT--PLK 62 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC----------------------HHHHHHH-------TTTSE--EEE
T ss_pred ccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC----------------------HHHHHHH-------hccCC--cEE
Confidence 44799999999999999999753 466666531 2232222 22332 222
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEEe
Q 005745 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAA 506 (679)
Q Consensus 444 ~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~aa 506 (679)
.++ .+.+.+.++++++|+||.|+... .-..+...|.+.++.+++.+
T Consensus 63 ~d~----------------~d~~~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 63 VDA----------------SNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp CCT----------------TCHHHHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECC
T ss_pred Eec----------------CCHHHHHHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeee
Confidence 222 36778899999999999999765 34567889999999999864
No 25
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.15 E-value=0.0034 Score=58.36 Aligned_cols=37 Identities=22% Similarity=0.442 Sum_probs=32.4
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+++.+.+|+|+|+|.+|..+++.|...|. +++++|.+
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 56678899999999999999999999997 89999875
No 26
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.10 E-value=0.00072 Score=70.60 Aligned_cols=77 Identities=17% Similarity=0.144 Sum_probs=56.9
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
+++++|+|+|+|+.|..++..|+..|+.+|+++|.+ ..|++.+++.+....+ +.
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~----------------------~~ka~~la~~~~~~~~----~~ 192 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT----------------------VEKAERLVREGDERRS----AY 192 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS----------------------HHHHHHHHHHSCSSSC----CE
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC----------------------HHHHHHHHHHhhhccC----ce
Confidence 578899999999999999999999999999998762 2366666655432111 11
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (679)
. +.+.+.+.+.++|+||.|+-..
T Consensus 193 ~---------------------~~~~~~~~~~~aDivIn~t~~~ 215 (297)
T 2egg_A 193 F---------------------SLAEAETRLAEYDIIINTTSVG 215 (297)
T ss_dssp E---------------------CHHHHHHTGGGCSEEEECSCTT
T ss_pred e---------------------eHHHHHhhhccCCEEEECCCCC
Confidence 1 2345667788999999999763
No 27
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.10 E-value=0.00077 Score=69.75 Aligned_cols=49 Identities=27% Similarity=0.339 Sum_probs=41.8
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHh
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLER 432 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~ 432 (679)
+++++|+|+|+||.|..++..|+..|+.+|++++. -..|++.+++.+..
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R----------------------~~~~a~~la~~~~~ 166 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANR----------------------DMAKALALRNELDH 166 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECS----------------------CHHHHHHHHHHHCC
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeC----------------------CHHHHHHHHHHhcc
Confidence 67899999999999999999999999999999865 23377777777665
No 28
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.08 E-value=0.0028 Score=57.59 Aligned_cols=94 Identities=15% Similarity=0.129 Sum_probs=63.2
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
...+|+|+|+|.+|..+++.|...|. +++++|.+ ..+++.++ +. ++.+ +
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~----------------------~~~~~~~~----~~--~~~~--~ 53 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKS----------------------KEKIELLE----DE--GFDA--V 53 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESC----------------------HHHHHHHH----HT--TCEE--E
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECC----------------------HHHHHHHH----HC--CCcE--E
Confidence 45789999999999999999999996 68888863 11233322 21 2332 2
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhcCCeEE
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTNKITI 503 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~lin~~~~~~~kp~I 503 (679)
..+. .+.+.+.+. ++++|+||.++++.+....+...++..+.+.|
T Consensus 54 ~gd~----------------~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~i 99 (141)
T 3llv_A 54 IADP----------------TDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDVYA 99 (141)
T ss_dssp ECCT----------------TCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCCCE
T ss_pred ECCC----------------CCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCceE
Confidence 2221 133344443 57899999999998888888888877764433
No 29
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.02 E-value=0.0017 Score=58.36 Aligned_cols=36 Identities=17% Similarity=0.393 Sum_probs=29.8
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+++.++|+|+|+|.+|..+++.|...|. +++++|.+
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~ 38 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDIN 38 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESC
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3567889999999999999999999996 68888864
No 30
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.00 E-value=0.0014 Score=70.45 Aligned_cols=94 Identities=12% Similarity=0.112 Sum_probs=65.2
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
++++|+|+|+|++|..+++.|++. .+++++|.+ ..|++.+++. .. ..
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~----------------------~~~a~~la~~-------~~--~~ 61 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN----------------------NENLEKVKEF-------AT--PL 61 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC----------------------HHHHHHHTTT-------SE--EE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECC----------------------HHHHHHHHhh-------CC--eE
Confidence 578999999999999999999987 678887752 2244443321 11 11
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEEe
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAA 506 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~aa 506 (679)
..++ .+.+.+.++++++|+||.|+-... -..+...|.+.++.+++.+
T Consensus 62 ~~d~----------------~~~~~l~~ll~~~DvVIn~~P~~~-~~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 62 KVDA----------------SNFDKLVEVMKEFELVIGALPGFL-GFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp ECCT----------------TCHHHHHHHHTTCSCEEECCCHHH-HHHHHHHHHHTTCCEEECC
T ss_pred EEec----------------CCHHHHHHHHhCCCEEEECCChhh-hHHHHHHHHHhCCeEEEcc
Confidence 1111 245678888999999999976443 2346678888999988754
No 31
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.82 E-value=0.0013 Score=60.44 Aligned_cols=71 Identities=23% Similarity=0.240 Sum_probs=52.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~ 443 (679)
+++|+|+|+|++|..+++.|...|+. ++++|.+ ..|++.+++.+. +.+..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~----------------------~~~~~~~a~~~~-----~~~~~-- 70 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRN----------------------IDHVRAFAEKYE-----YEYVL-- 70 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESC----------------------HHHHHHHHHHHT-----CEEEE--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCC----------------------HHHHHHHHHHhC-----CceEe--
Confidence 88999999999999999999999988 9998862 225555554442 22211
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh
Q 005745 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (679)
Q Consensus 444 ~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (679)
.+.+.+.+.++|+||.|+.+.
T Consensus 71 ---------------------~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 71 ---------------------INDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp ---------------------CSCHHHHHHTCSEEEECSCCS
T ss_pred ---------------------ecCHHHHhcCCCEEEEeCCCC
Confidence 234456778999999999875
No 32
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.82 E-value=0.0018 Score=67.31 Aligned_cols=50 Identities=24% Similarity=0.207 Sum_probs=43.0
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhh
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI 433 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~i 433 (679)
+++++|+|+|+||.|..++..|+..|+.+|++++. ...|++.+++.+...
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R----------------------~~~~a~~la~~~~~~ 173 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNR----------------------TFAKAEQLAELVAAY 173 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEES----------------------SHHHHHHHHHHHGGG
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEEC----------------------CHHHHHHHHHHhhcc
Confidence 67899999999999999999999999999999876 234778888887764
No 33
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.77 E-value=0.0086 Score=53.44 Aligned_cols=90 Identities=20% Similarity=0.251 Sum_probs=57.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~ 443 (679)
+.+|+|+|+|.+|..+++.|...|. +++++|.+. .+++.+ .+.. ++.+ +.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~----------------------~~~~~~----~~~~-~~~~--~~ 53 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDK----------------------DICKKA----SAEI-DALV--IN 53 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH----------------------HHHHHH----HHHC-SSEE--EE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH----------------------HHHHHH----HHhc-CcEE--EE
Confidence 3589999999999999999999994 688888521 122222 2211 2322 22
Q ss_pred cccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhcC
Q 005745 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTN 499 (679)
Q Consensus 444 ~~Ipm~gh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~lin~~~~~~~ 499 (679)
.+. .+.+.+.+. ++++|+||.++.+.+....+..++...+
T Consensus 54 ~d~----------------~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 54 GDC----------------TKIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYG 94 (140)
T ss_dssp SCT----------------TSHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTT
T ss_pred cCC----------------CCHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcC
Confidence 111 123333333 6789999999998876666666666654
No 34
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.76 E-value=0.01 Score=54.82 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=63.7
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
.+.+|+|+|+|.+|..+++.|...|. +++++|.+. ..|++.+++.+ ..++.+ +
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~---------------------~~~~~~~~~~~---~~~~~~--i 54 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLP---------------------EDDIKQLEQRL---GDNADV--I 54 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCC---------------------HHHHHHHHHHH---CTTCEE--E
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCC---------------------hHHHHHHHHhh---cCCCeE--E
Confidence 46789999999999999999999994 688888621 11222222221 123433 2
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhc
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANT 498 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~lin~~~~~~ 498 (679)
..+. .+.+.+.+. ++++|+||.++++.+.-..+...++..
T Consensus 55 ~gd~----------------~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 55 PGDS----------------NDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp ESCT----------------TSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH
T ss_pred EcCC----------------CCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH
Confidence 2211 234555554 889999999999998888888888776
No 35
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.71 E-value=0.0039 Score=64.17 Aligned_cols=80 Identities=20% Similarity=0.250 Sum_probs=57.7
Q ss_pred hcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
+++++|+|+| +||+|..+++.|+..|.. ++++|.+ ..|++.+++.+... +.+.+.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R~----------------------~~~~~~l~~~~~~~-~~~~~~ 172 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRK----------------------LDKAQAAADSVNKR-FKVNVT 172 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESS----------------------HHHHHHHHHHHHHH-HTCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEECC----------------------HHHHHHHHHHHHhc-CCcEEE
Confidence 5788999999 999999999999999986 9888752 22566666666543 233332
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (679)
..+ + .+.+.+.++++++|+||.++.
T Consensus 173 ~~D--~----------------~~~~~~~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 173 AAE--T----------------ADDASRAEAVKGAHFVFTAGA 197 (287)
T ss_dssp EEE--C----------------CSHHHHHHHTTTCSEEEECCC
T ss_pred Eec--C----------------CCHHHHHHHHHhCCEEEECCC
Confidence 222 1 244567778888999999985
No 36
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.71 E-value=0.0063 Score=57.83 Aligned_cols=92 Identities=13% Similarity=0.037 Sum_probs=60.1
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.+.+.+|+|+|+|.+|..+|+.|... |. +++++|.+. .|++.+ ++. ++.+
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~----------------------~~~~~~----~~~--g~~~ 86 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIRE----------------------EAAQQH----RSE--GRNV 86 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCH----------------------HHHHHH----HHT--TCCE
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCH----------------------HHHHHH----HHC--CCCE
Confidence 35677999999999999999999999 86 688887621 133322 222 2332
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHh--hccCCEEEEeCCChHHHHHHHHHHHhcC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDL--ILSHDVIFLLTDTRESRWLPTLLCANTN 499 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~l--i~~~DvV~~~tDs~esR~lin~~~~~~~ 499 (679)
+..+. .+.+.+.+. ++++|+||.++++.+.-..+...++..+
T Consensus 87 --~~gd~----------------~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 87 --ISGDA----------------TDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp --EECCT----------------TCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTT
T ss_pred --EEcCC----------------CCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHC
Confidence 11111 123344454 6789999999998776555555666555
No 37
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.70 E-value=0.0016 Score=67.88 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=33.0
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|+|+||.|..++..|+..|+++|++++.
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nR 154 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTR 154 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEES
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeC
Confidence 67899999999999999999999999999999865
No 38
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.68 E-value=0.0016 Score=65.73 Aligned_cols=92 Identities=14% Similarity=0.163 Sum_probs=65.2
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
.|++++|||||+|.+|...++.|...|. ++++||.+.- + ..+. |.+ ...+.+.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~-------------~--------~l~~----l~~-~~~i~~i 80 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVS-------------A--------EINE----WEA-KGQLRVK 80 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCC-------------H--------HHHH----HHH-TTSCEEE
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCC-------------H--------HHHH----HHH-cCCcEEE
Confidence 5889999999999999999999999995 8999886310 1 1111 111 1234332
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEE
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITI 503 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I 503 (679)
...+ . .+.++++|+||.+||+.+.-..+...|. .++|+-
T Consensus 81 --~~~~-----------------~----~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~VN 119 (223)
T 3dfz_A 81 --RKKV-----------------G----EEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLVN 119 (223)
T ss_dssp --CSCC-----------------C----GGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEEE
T ss_pred --ECCC-----------------C----HhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEEE
Confidence 2111 1 1346789999999999999888888887 888743
No 39
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.68 E-value=0.00096 Score=69.27 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=34.1
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.+++++|+|+|+||.|..++..|+..|+++|++++.+
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 150 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRT 150 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3678999999999999999999999999999998764
No 40
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.51 E-value=0.0065 Score=67.43 Aligned_cols=38 Identities=24% Similarity=0.210 Sum_probs=30.2
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
..++.++|+|+|+|++|..+++.|++.|--+++++|.+
T Consensus 19 ~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 19 GRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp ----CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESS
T ss_pred cCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECC
Confidence 35667899999999999999999999844479998874
No 41
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.48 E-value=0.0059 Score=66.25 Aligned_cols=35 Identities=34% Similarity=0.637 Sum_probs=32.9
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+.+++|+|+|+|++|..+++.|...|+++++++|.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r 199 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR 199 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 67899999999999999999999999999999875
No 42
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.48 E-value=0.012 Score=60.94 Aligned_cols=105 Identities=12% Similarity=0.015 Sum_probs=66.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHH-------hh-CC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLE-------RI-FP 435 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~-------~i-nP 435 (679)
+++|+|+|+||.|..++..|+..| .+|++++.+. .|++.++ .+. ++ ..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~----------------------~ka~~la-~~~~~~~~~~~l~~~ 173 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSS----------------------RGLDFFQ-RLGCDCFMEPPKSAF 173 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSC----------------------TTHHHHH-HHTCEEESSCCSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCH----------------------HHHHHHH-HCCCeEecHHHhccC
Confidence 889999999999999999999999 9999987642 1333333 211 00 23
Q ss_pred CcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEE
Q 005745 436 AVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (679)
Q Consensus 436 ~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~a 505 (679)
++-|.+. .+.|.+++ ....+.+.+.+...-+|+|..-+++++ +-+.+++.|..++++
T Consensus 174 DiVInaT--p~Gm~~~~---------~l~~~~l~~~l~~~~~v~D~vY~P~T~--ll~~A~~~G~~~~~G 230 (269)
T 3phh_A 174 DLIINAT--SASLHNEL---------PLNKEVLKGYFKEGKLAYDLAYGFLTP--FLSLAKELKTPFQDG 230 (269)
T ss_dssp SEEEECC--TTCCCCSC---------SSCHHHHHHHHHHCSEEEESCCSSCCH--HHHHHHHTTCCEECS
T ss_pred CEEEEcc--cCCCCCCC---------CCChHHHHhhCCCCCEEEEeCCCCchH--HHHHHHHCcCEEECC
Confidence 3333332 22333321 123333444567778899988877555 445678888877764
No 43
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=96.48 E-value=0.0013 Score=67.41 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=32.0
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++ +|+|+|+|+.|..++..|+..|+++|+++|.
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR 140 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNR 140 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEES
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 567 9999999999999999999999999999887
No 44
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.34 E-value=0.037 Score=50.55 Aligned_cols=88 Identities=14% Similarity=0.135 Sum_probs=57.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~ 443 (679)
..+|+|+|+|.+|..+|+.|...|. .++++|.|. .+++.+. + .++.+ +.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~----------------------~~~~~~~----~--~g~~~--i~ 55 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSR----------------------TRVDELR----E--RGVRA--VL 55 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH----------------------HHHHHHH----H--TTCEE--EE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCH----------------------HHHHHHH----H--cCCCE--EE
Confidence 4589999999999999999999996 788888731 1333322 2 24433 22
Q ss_pred cccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhc
Q 005745 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANT 498 (679)
Q Consensus 444 ~~Ipm~gh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~lin~~~~~~ 498 (679)
.+. .+.+.+.+. ++++|+||.++++.+.-..+...++..
T Consensus 56 gd~----------------~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~ 95 (140)
T 3fwz_A 56 GNA----------------ANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAK 95 (140)
T ss_dssp SCT----------------TSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHH
T ss_pred CCC----------------CCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHH
Confidence 211 133344433 678999999999887655455555554
No 45
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.34 E-value=0.014 Score=57.33 Aligned_cols=39 Identities=15% Similarity=0.136 Sum_probs=29.1
Q ss_pred hhHHhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 357 LNLDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 357 ~gq~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.....+++++|+|.|+ |++|.++++.|+..|. ++++++.
T Consensus 14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R 53 (236)
T 3e8x_A 14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVR 53 (236)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEEC
Confidence 3457889999999998 9999999999999996 7777765
No 46
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.33 E-value=0.018 Score=56.32 Aligned_cols=90 Identities=16% Similarity=0.172 Sum_probs=61.8
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEecc
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMA 445 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~~~ 445 (679)
||+|+|+|.+|..+|+.|...|. .++++|.| ..+++.+++. .++.+ +..+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~----------------------~~~~~~l~~~-----~~~~~--i~gd 51 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKD----------------------RELCEEFAKK-----LKATI--IHGD 51 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESC----------------------HHHHHHHHHH-----SSSEE--EESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECC----------------------HHHHHHHHHH-----cCCeE--EEcC
Confidence 79999999999999999999996 68888852 1233333221 13332 2221
Q ss_pred cCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHh-cCCe
Q 005745 446 IPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCAN-TNKI 501 (679)
Q Consensus 446 Ipm~gh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~lin~~~~~-~~kp 501 (679)
. .+.+.+.+. ++++|+||.++++.+...++...++. ++.+
T Consensus 52 ~----------------~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~ 93 (218)
T 3l4b_C 52 G----------------SHKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVK 93 (218)
T ss_dssp T----------------TSHHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSCCC
T ss_pred C----------------CCHHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcCCC
Confidence 1 234455554 78999999999999988888888776 4443
No 47
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=96.30 E-value=0.021 Score=58.67 Aligned_cols=87 Identities=17% Similarity=0.221 Sum_probs=65.3
Q ss_pred HHhhcCCeEEEEcC-ChHHHHHHHHHHHcCCC--EEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCC
Q 005745 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVR--KITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFP 435 (679)
Q Consensus 359 q~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg--~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP 435 (679)
...|++++|+|.|+ ||+|..+|+.|++.|.+ ++.++|.+ ..+.+.+++.+.+.+|
T Consensus 28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~----------------------~~~~~~~~~~l~~~~~ 85 (287)
T 3rku_A 28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR----------------------LEKLEELKKTIDQEFP 85 (287)
T ss_dssp HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC----------------------HHHHHHHHHHHHHHCT
T ss_pred hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC----------------------HHHHHHHHHHHHhhCC
Confidence 35688999999985 79999999999998875 78887752 2356777888888888
Q ss_pred CcEEEEEecccCCCCCCCCCccccccccChhhHHHhhc-------cCCEEEEeCC
Q 005745 436 AVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL-------SHDVIFLLTD 483 (679)
Q Consensus 436 ~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~-------~~DvV~~~tD 483 (679)
+.++..+..++ .+.+.+.++++ ..|+||.+..
T Consensus 86 ~~~~~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lVnnAG 124 (287)
T 3rku_A 86 NAKVHVAQLDI----------------TQAEKIKPFIENLPQEFKDIDILVNNAG 124 (287)
T ss_dssp TCEEEEEECCT----------------TCGGGHHHHHHTSCGGGCSCCEEEECCC
T ss_pred CCeEEEEECCC----------------CCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 88888888766 23344444443 5799998754
No 48
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.17 E-value=0.012 Score=59.39 Aligned_cols=92 Identities=14% Similarity=0.187 Sum_probs=61.1
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
...+|.|||+|.+|..+++.|+..|...++++|.+ ..|++.+++.+ ++.+ .
T Consensus 9 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~----------------------~~~~~~~~~~~-----g~~~--~ 59 (266)
T 3d1l_A 9 EDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT----------------------EESARELAQKV-----EAEY--T 59 (266)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS----------------------HHHHHHHHHHT-----TCEE--E
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC----------------------HHHHHHHHHHc-----CCce--e
Confidence 34689999999999999999999997767777642 12333333322 1221 1
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHh--cCCeEEEEe
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN--TNKITITAA 506 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~--~~kp~I~aa 506 (679)
....+.++++|+||.|+-+...+-++..+... .+..+|+.+
T Consensus 60 -----------------------~~~~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 60 -----------------------TDLAEVNPYAKLYIVSLKDSAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp -----------------------SCGGGSCSCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEEECC
T ss_pred -----------------------CCHHHHhcCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEEECC
Confidence 11234567899999999888777666665432 456777753
No 49
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.14 E-value=0.011 Score=65.21 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=30.8
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCc
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~ 398 (679)
+.++|+|+|+|++|..+++.|+..|. +++++|.+.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~ 36 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTL 36 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCH
Confidence 46789999999999999999999995 599998753
No 50
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.11 E-value=0.028 Score=58.58 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=30.9
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
...||.|||+|..|..+|++|+..|..+++++|.+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 34689999999999999999999998789999875
No 51
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.08 E-value=0.017 Score=61.71 Aligned_cols=35 Identities=26% Similarity=0.568 Sum_probs=32.4
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.++.++|+|+|+|++|..+++.|.+.|. +++++|.
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr 198 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDI 198 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 4778999999999999999999999999 8999876
No 52
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.04 E-value=0.0047 Score=63.38 Aligned_cols=34 Identities=29% Similarity=0.418 Sum_probs=31.6
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|||+|+.|..+++.|...|+ +++++|.
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r 160 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNR 160 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEEC
Confidence 678899999999999999999999998 9999875
No 53
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=96.02 E-value=0.029 Score=54.30 Aligned_cols=97 Identities=22% Similarity=0.166 Sum_probs=60.2
Q ss_pred eEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEec
Q 005745 366 KCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (679)
Q Consensus 366 kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~~ 444 (679)
||+|+| +|.+|+.+++.|+..|. +++++|.+. .|++.+++.+....+...+.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~---- 54 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRRE----------------------EKAEAKAAEYRRIAGDASIT---- 54 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSH----------------------HHHHHHHHHHHHHHSSCCEE----
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeCCH----------------------HHHHHHHHHhccccccCCCC----
Confidence 799999 99999999999999996 688877521 12333332221110100111
Q ss_pred ccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHH-hcCCeEEEEeeCc
Q 005745 445 AIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCA-NTNKITITAALGF 509 (679)
Q Consensus 445 ~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~-~~~kp~I~aalG~ 509 (679)
...+.+.++++|+||.|+-....+.++..+.. ..++.+|+.+-|+
T Consensus 55 --------------------~~~~~~~~~~~D~Vi~~~~~~~~~~~~~~l~~~~~~~~vi~~~~g~ 100 (212)
T 1jay_A 55 --------------------GMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPV 100 (212)
T ss_dssp --------------------EEEHHHHHHHCSEEEECSCHHHHHHHHHHTHHHHTTSEEEECCCCE
T ss_pred --------------------hhhHHHHHhcCCEEEEeCChhhHHHHHHHHHHHcCCCEEEEcCCCc
Confidence 12344567889999999987766655554432 1377788765443
No 54
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=95.96 E-value=0.023 Score=59.65 Aligned_cols=82 Identities=16% Similarity=0.266 Sum_probs=58.8
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCc
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAV 437 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v 437 (679)
..+++++|+|.|+ |++|+.+++.|+.. |..+++++|.+ ..|.+.+++.+. ..
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~----------------------~~~~~~~~~~~~----~~ 70 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRD----------------------ELKQSEMAMEFN----DP 70 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESC----------------------HHHHHHHHHHHC----CT
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECC----------------------hhhHHHHHHHhc----CC
Confidence 3467899999995 99999999999999 98889888753 223333443332 12
Q ss_pred EEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 005745 438 AAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (679)
Q Consensus 438 ~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (679)
.++.+..++ .+.+.+.+++++.|+||.+..
T Consensus 71 ~v~~~~~Dl----------------~d~~~l~~~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 71 RMRFFIGDV----------------RDLERLNYALEGVDICIHAAA 100 (344)
T ss_dssp TEEEEECCT----------------TCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEECCC----------------CCHHHHHHHHhcCCEEEECCC
Confidence 345555444 356777888899999999875
No 55
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=95.95 E-value=0.027 Score=62.67 Aligned_cols=99 Identities=13% Similarity=0.192 Sum_probs=67.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC-C--CEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWG-V--RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~G-V--g~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
..||+|||+|++|+.+|+.|++-+ + ..|+++|.+.. ++.. .+.+ ++++.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~-------------------~~~~----~~~~-----g~~~~ 64 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT-------------------KVDV----AQQY-----GVSFK 64 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC-------------------SCCH----HHHH-----TCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh-------------------hhhH----Hhhc-----CCcee
Confidence 468999999999999999999864 5 58999886432 2211 1111 34554
Q ss_pred EEecccCCCCCCCCCccccccccChhh-HHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEEee
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRR-LTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAAL 507 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~-l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~aal 507 (679)
+... + ..+.+. +..++++.|+||++...... .-+-++|.+.|+-+|+.+.
T Consensus 65 ~~~V---------d-------adnv~~~l~aLl~~~DvVIN~s~~~~~-l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 65 LQQI---------T-------PQNYLEVIGSTLEENDFLIDVSIGISS-LALIILCNQKGALYINAAT 115 (480)
T ss_dssp ECCC---------C-------TTTHHHHTGGGCCTTCEEEECCSSSCH-HHHHHHHHHHTCEEEESSC
T ss_pred EEec---------c-------chhHHHHHHHHhcCCCEEEECCccccC-HHHHHHHHHcCCCEEECCC
Confidence 4432 1 122323 34577778999998877655 3466799999999998754
No 56
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=95.92 E-value=0.012 Score=60.21 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=31.2
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|+|+||+|..+++.|+..| .+++++|.
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R 150 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITNR 150 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEEC
Confidence 56889999999999999999999999 79999765
No 57
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.87 E-value=0.026 Score=58.06 Aligned_cols=92 Identities=17% Similarity=0.166 Sum_probs=60.9
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCC--CEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGV--RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GV--g~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
+..||.|||+|..|+.+++.|+..|+ .+++++|. ...|++.+++. + ++.
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr----------------------~~~~~~~l~~~----~-gi~-- 52 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNR----------------------SLDKLDFFKEK----C-GVH-- 52 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECS----------------------SSHHHHHHHHT----T-CCE--
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeC----------------------CHHHHHHHHHH----c-CCE--
Confidence 35789999999999999999999995 26777765 22244444332 1 121
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHh---cCCeEEEEe
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN---TNKITITAA 506 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~---~~kp~I~aa 506 (679)
. .....+.++++|+||.|+.....+-++..+... .+..+|+.+
T Consensus 53 ~-----------------------~~~~~~~~~~aDvVilav~p~~~~~vl~~l~~~~l~~~~iiiS~~ 98 (280)
T 3tri_A 53 T-----------------------TQDNRQGALNADVVVLAVKPHQIKMVCEELKDILSETKILVISLA 98 (280)
T ss_dssp E-----------------------ESCHHHHHSSCSEEEECSCGGGHHHHHHHHHHHHHTTTCEEEECC
T ss_pred E-----------------------eCChHHHHhcCCeEEEEeCHHHHHHHHHHHHhhccCCCeEEEEec
Confidence 1 123345678999999999776667666666532 344677643
No 58
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.87 E-value=0.026 Score=56.62 Aligned_cols=111 Identities=21% Similarity=0.155 Sum_probs=63.8
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
..+...||.|||+|..|..+|+.|++.|. +++++|.+.=. .+.+. . .... +...++ .+.+..+.+.
T Consensus 15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~~~--~~~~~--~-~~~~---~~~~~~----~~~~~~~~~~- 80 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDPKA--TLARA--E-PDAM---GAPPFS----QWLPEHPHVH- 80 (245)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHH--HHTCC-------------CCHH----HHGGGSTTCE-
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCChhh--hhhhh--h-hhhh---cchhhh----HHHhhcCcee-
Confidence 57889999999999999999999999995 78888864210 00000 0 0001 111111 2222222211
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHH-H-HhcCCeEEEEeeCc
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLL-C-ANTNKITITAALGF 509 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~-~-~~~~kp~I~aalG~ 509 (679)
.....+.++++|+||.|+-....+-.+..+ . ...++.+|+.+-|+
T Consensus 81 -------------------------~~~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 -------------------------LAAFADVAAGAELVVNATEGASSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp -------------------------EEEHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred -------------------------ccCHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 123456678899999999987766555444 1 22677888876443
No 59
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=95.86 E-value=0.034 Score=56.03 Aligned_cols=84 Identities=18% Similarity=0.285 Sum_probs=61.1
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+.+.+++..+
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~~~~~ 63 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRR----------------------EENVNETIKEIRAQYPDAIL 63 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS----------------------HHHHHHHHHHHHHHCTTCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhhCCCceE
Confidence 367888999986 7999999999999996 57776652 23566677788888888888
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh---ccCCEEEEeCC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI---LSHDVIFLLTD 483 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li---~~~DvV~~~tD 483 (679)
..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 64 ~~~~~D~----------------~~~~~~~~~~~~~g~id~lv~nAg 94 (267)
T 3t4x_A 64 QPVVADL----------------GTEQGCQDVIEKYPKVDILINNLG 94 (267)
T ss_dssp EEEECCT----------------TSHHHHHHHHHHCCCCSEEEECCC
T ss_pred EEEecCC----------------CCHHHHHHHHHhcCCCCEEEECCC
Confidence 8877654 2333344444 46799998764
No 60
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=95.82 E-value=0.056 Score=54.53 Aligned_cols=85 Identities=15% Similarity=0.103 Sum_probs=57.1
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcE
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~ 438 (679)
..+++++|+|.|+ |++|..+++.|+..|. ++.++|.+ ..+.+.+++.+++.....+
T Consensus 28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~~~~ 84 (279)
T 1xg5_A 28 ERWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCART----------------------VGNIEELAAECKSAGYPGT 84 (279)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHTTCSSE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECC----------------------hHHHHHHHHHHHhcCCCce
Confidence 4578899999974 8999999999999996 57776652 1244555566666554456
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 439 v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
+..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 85 ~~~~~~Dl----------------~~~~~v~~~~~~~~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 85 LIPYRCDL----------------SNEEDILSMFSAIRSQHSGVDICINNAG 120 (279)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred EEEEEecC----------------CCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 66666554 2333333333 37899998764
No 61
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=95.79 E-value=0.014 Score=59.91 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=31.6
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|+|+||.|..++..|+..| .+++++|.
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R 150 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANR 150 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEES
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEEC
Confidence 56889999999999999999999999 89999876
No 62
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.78 E-value=0.093 Score=54.22 Aligned_cols=84 Identities=17% Similarity=0.208 Sum_probs=55.1
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhC----
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIF---- 434 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~in---- 434 (679)
..++.++|+|.|+ |.+|+.+++.|+..| -+++.+|...- +. ....+.+....
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~-------------------~~---~~~~~~~~~~~~~~~ 77 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNFST-------------------GH---QYNLDEVKTLVSTEQ 77 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSS-------------------CC---HHHHHHHHHTSCHHH
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCC-------------------Cc---hhhhhhhhhcccccc
Confidence 3467889999995 899999999999999 46777665211 00 01112222221
Q ss_pred -CCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCC
Q 005745 435 -PAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (679)
Q Consensus 435 -P~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (679)
+. ++.+..++ .+.+.+.++++++|+||.+...
T Consensus 78 ~~~--~~~~~~Dl----------------~d~~~~~~~~~~~d~Vih~A~~ 110 (351)
T 3ruf_A 78 WSR--FCFIEGDI----------------RDLTTCEQVMKGVDHVLHQAAL 110 (351)
T ss_dssp HTT--EEEEECCT----------------TCHHHHHHHTTTCSEEEECCCC
T ss_pred CCc--eEEEEccC----------------CCHHHHHHHhcCCCEEEECCcc
Confidence 33 34444443 3567788889999999998763
No 63
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.76 E-value=0.015 Score=63.13 Aligned_cols=37 Identities=22% Similarity=0.504 Sum_probs=35.5
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+|+..||+|+|+|..|..+|+.|+..|+++|+++|..
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 6889999999999999999999999999999999985
No 64
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.73 E-value=0.088 Score=49.65 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=29.1
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+++|+|.|+ |++|..+++.|+..| -++++++.+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~ 36 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRD 36 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeC
Confidence 468999998 999999999999999 578888764
No 65
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.71 E-value=0.026 Score=59.76 Aligned_cols=37 Identities=22% Similarity=0.369 Sum_probs=31.7
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++..||.|+|+|.+|..+|..|+..|.++++|+|-
T Consensus 3 ~~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di 39 (324)
T 3gvi_A 3 GSMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDI 39 (324)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCCcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeC
Confidence 3466789999999999999999999999888999886
No 66
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=95.71 E-value=0.034 Score=55.66 Aligned_cols=63 Identities=14% Similarity=0.127 Sum_probs=45.5
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCC-cE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPA-VA 438 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~-v~ 438 (679)
.+++++++|.|+ ||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+.+.++. .+
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~~~~~ 60 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARS----------------------KQNLEKVHDEIMRSNKHVQE 60 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESC----------------------HHHHHHHHHHHHHHCTTSCC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHHhccccCc
Confidence 356788999986 7999999999999997 67787752 23556666777776655 55
Q ss_pred EEEEeccc
Q 005745 439 AEGVVMAI 446 (679)
Q Consensus 439 v~~~~~~I 446 (679)
+..+..++
T Consensus 61 ~~~~~~Dv 68 (250)
T 3nyw_A 61 PIVLPLDI 68 (250)
T ss_dssp CEEEECCT
T ss_pred ceEEeccC
Confidence 55555544
No 67
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.67 E-value=0.018 Score=57.59 Aligned_cols=89 Identities=11% Similarity=0.163 Sum_probs=56.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC---CEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGV---RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GV---g~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
.||.|||+|.+|..+++.|++.|. .+++++|. ...|++.+++.+ ++. .
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r----------------------~~~~~~~~~~~~-----g~~--~ 53 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDL----------------------NTANLKNASEKY-----GLT--T 53 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECS----------------------CHHHHHHHHHHH-----CCE--E
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeC----------------------CHHHHHHHHHHh-----CCE--E
Confidence 589999999999999999999996 36776665 222444444332 111 1
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHH--hcCCeEEEE
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCA--NTNKITITA 505 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~--~~~kp~I~a 505 (679)
.....+.++++|+||.|+.....+-.+..+.. ..++.+|+.
T Consensus 54 -----------------------~~~~~e~~~~aDvVilav~~~~~~~v~~~l~~~l~~~~~vvs~ 96 (247)
T 3gt0_A 54 -----------------------TTDNNEVAKNADILILSIKPDLYASIINEIKEIIKNDAIIVTI 96 (247)
T ss_dssp -----------------------CSCHHHHHHHCSEEEECSCTTTHHHHC---CCSSCTTCEEEEC
T ss_pred -----------------------eCChHHHHHhCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEEEe
Confidence 12334567789999999976666665555543 234566653
No 68
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.65 E-value=0.029 Score=59.96 Aligned_cols=36 Identities=28% Similarity=0.583 Sum_probs=32.9
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..++.++|+|+|+|++|..+++.|.+.|. +++++|.
T Consensus 162 ~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~ 197 (369)
T 2eez_A 162 PGVAPASVVILGGGTVGTNAAKIALGMGA-QVTILDV 197 (369)
T ss_dssp TBBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 35888999999999999999999999998 8888875
No 69
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.59 E-value=0.038 Score=55.33 Aligned_cols=62 Identities=21% Similarity=0.272 Sum_probs=44.6
Q ss_pred hhcCCeEEEEcC-C-hHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcE
Q 005745 361 ILSSRKCLLLGA-G-TLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (679)
Q Consensus 361 kL~~~kVlIvGa-G-gLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~ 438 (679)
.+++++|+|.|+ | |+|..+|+.|+..|.. +.++|.+ ..+.+.+.+.+++.. ..+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~-V~~~~r~----------------------~~~~~~~~~~l~~~~-~~~ 74 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDYH----------------------ERRLGETRDQLADLG-LGR 74 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCE-EEEEESC----------------------HHHHHHHHHHHHTTC-SSC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCE-EEEecCC----------------------HHHHHHHHHHHHhcC-CCc
Confidence 477899999999 7 8999999999999964 7777652 224555566665543 345
Q ss_pred EEEEeccc
Q 005745 439 AEGVVMAI 446 (679)
Q Consensus 439 v~~~~~~I 446 (679)
+..+..++
T Consensus 75 ~~~~~~Dl 82 (266)
T 3o38_A 75 VEAVVCDV 82 (266)
T ss_dssp EEEEECCT
T ss_pred eEEEEeCC
Confidence 66666554
No 70
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.59 E-value=0.021 Score=59.18 Aligned_cols=37 Identities=32% Similarity=0.480 Sum_probs=33.4
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCc
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~ 398 (679)
.|++++|+|||+|-+|...++.|...| .++++||.+.
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~G-a~VtViap~~ 46 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTG-CKLTLVSPDL 46 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGT-CEEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCC-CEEEEEcCCC
Confidence 468999999999999999999999999 5699999754
No 71
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=95.54 E-value=0.036 Score=55.82 Aligned_cols=91 Identities=14% Similarity=0.131 Sum_probs=59.4
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+.+.++..++
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~~~~~ 61 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARD----------------------GERLRAAESALRQRFPGARL 61 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHHSTTCCE
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHHhcCCceE
Confidence 367889999975 7999999999999997 47777752 23566677777777777777
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (679)
..+..++ ++ .++...-.+.+.+.+...|++|.+..
T Consensus 62 ~~~~~Dv-------~~--~~~v~~~~~~~~~~~g~id~lvnnAg 96 (265)
T 3lf2_A 62 FASVCDV-------LD--ALQVRAFAEACERTLGCASILVNNAG 96 (265)
T ss_dssp EEEECCT-------TC--HHHHHHHHHHHHHHHCSCSEEEECCC
T ss_pred EEEeCCC-------CC--HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 7776655 10 11111111222223346799888764
No 72
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=95.53 E-value=0.089 Score=52.23 Aligned_cols=35 Identities=20% Similarity=0.534 Sum_probs=30.5
Q ss_pred hcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.| .||+|.++|+.|++.|..++.++|.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence 5678999997 5799999999999999887888775
No 73
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=95.53 E-value=0.066 Score=53.73 Aligned_cols=84 Identities=21% Similarity=0.212 Sum_probs=57.2
Q ss_pred hhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.+++++|+|.| .||+|.++|+.|++.|. ++.++|.+ ..+.+.+++.+.+..++.++
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~~~~~ 66 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVS----------------------SEGLEASKAAVLETAPDAEV 66 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHHCTTCCE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhhcCCceE
Confidence 46788999997 57999999999999996 57776642 22445556667666666667
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 67 ~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lv~nAg 101 (267)
T 1iy8_A 67 LTTVADV----------------SDEAQVEAYVTATTERFGRIDGFFNNAG 101 (267)
T ss_dssp EEEECCT----------------TSHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EEEEccC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 7766554 2333444443 36799998753
No 74
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.52 E-value=0.044 Score=54.14 Aligned_cols=88 Identities=13% Similarity=0.090 Sum_probs=62.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~ 443 (679)
..+|+|+|+|.+|..+++.|...|. ++++|.|. .+++. +. +++.+ +.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~----------------------~~~~~----~~---~~~~~--i~ 55 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV--FVLAEDEN----------------------VRKKV----LR---SGANF--VH 55 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGG----------------------GHHHH----HH---TTCEE--EE
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe--EEEEECCH----------------------HHHHH----Hh---cCCeE--EE
Confidence 5689999999999999999999987 88887621 12222 22 34433 32
Q ss_pred cccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhcCC
Q 005745 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTNK 500 (679)
Q Consensus 444 ~~Ipm~gh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~lin~~~~~~~k 500 (679)
.+. .+.+.+.+. ++++|+||.++++.+.-.++...++..+.
T Consensus 56 gd~----------------~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~ 97 (234)
T 2aef_A 56 GDP----------------TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 97 (234)
T ss_dssp SCT----------------TCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCS
T ss_pred cCC----------------CCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCC
Confidence 211 234555555 78999999999999888888888888765
No 75
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=95.51 E-value=0.033 Score=59.45 Aligned_cols=77 Identities=17% Similarity=0.312 Sum_probs=57.5
Q ss_pred cCCeEEEEcCChHHHHHHHHHHH-cCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMA-WGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~-~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
..++|+|||+|+.|...++.|.. .++.+++++|. ...|++.+++.+.+ .+++.+..
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r----------------------~~~~a~~la~~~~~-~~g~~~~~ 184 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDT----------------------DPLATAKLIANLKE-YSGLTIRR 184 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECS----------------------SHHHHHHHHHHHTT-CTTCEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC----------------------CHHHHHHHHHHHHh-ccCceEEE
Confidence 57799999999999999999865 47889999765 23477777777654 23444433
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (679)
+ +.+++.++++|+||.||-+.
T Consensus 185 ~-----------------------~~~~eav~~aDiVi~aTps~ 205 (350)
T 1x7d_A 185 A-----------------------SSVAEAVKGVDIITTVTADK 205 (350)
T ss_dssp C-----------------------SSHHHHHTTCSEEEECCCCS
T ss_pred e-----------------------CCHHHHHhcCCEEEEeccCC
Confidence 2 24556778999999999875
No 76
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.51 E-value=0.027 Score=60.49 Aligned_cols=36 Identities=31% Similarity=0.493 Sum_probs=33.1
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+.+++|+|+|+|++|..+++.+.+.|. +++++|.
T Consensus 164 ~~l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~ 199 (377)
T 2vhw_A 164 PGVEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDI 199 (377)
T ss_dssp TTBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 35889999999999999999999999998 8988886
No 77
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=95.49 E-value=0.059 Score=57.90 Aligned_cols=86 Identities=16% Similarity=0.273 Sum_probs=61.4
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCC--C
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFP--A 436 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP--~ 436 (679)
..+++++|+|.|+ |++|+++++.|+..|..+++++|. ...+...+.+.|.+.++ .
T Consensus 31 ~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r----------------------~~~~~~~~~~~l~~~~~~~~ 88 (399)
T 3nzo_A 31 SVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDI----------------------SENNMVELVRDIRSSFGYIN 88 (399)
T ss_dssp HHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECS----------------------CHHHHHHHHHHHHHHTCCCS
T ss_pred HHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEEC----------------------CcchHHHHHHHHHHhcCCCC
Confidence 4477899999995 889999999999999888888775 22345555666666655 3
Q ss_pred cEEEEEecccCCCCCCCCCccccccccChhhHHHhh--ccCCEEEEeCC
Q 005745 437 VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI--LSHDVIFLLTD 483 (679)
Q Consensus 437 v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li--~~~DvV~~~tD 483 (679)
..++.+..++ .+.+.+..++ .+.|+||.+..
T Consensus 89 ~~v~~~~~Dl----------------~d~~~~~~~~~~~~~D~Vih~Aa 121 (399)
T 3nzo_A 89 GDFQTFALDI----------------GSIEYDAFIKADGQYDYVLNLSA 121 (399)
T ss_dssp SEEEEECCCT----------------TSHHHHHHHHHCCCCSEEEECCC
T ss_pred CcEEEEEEeC----------------CCHHHHHHHHHhCCCCEEEECCC
Confidence 5666666554 2344455555 48999998764
No 78
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=95.49 E-value=0.073 Score=53.23 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=28.7
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA-RLLLFSR 39 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999975 7999999999999996 6777765
No 79
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=95.49 E-value=0.036 Score=57.10 Aligned_cols=34 Identities=18% Similarity=0.344 Sum_probs=31.7
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++|+|+|+||.|..++..|...|+++|++++.
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nR 151 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYAR 151 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence 4679999999999999999999999999999876
No 80
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.47 E-value=0.034 Score=57.55 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=32.5
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.|.+++|+|||+|.+|..+|+.|.+.|. +++++|.
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~ 188 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGAR 188 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEEC
Confidence 5789999999999999999999999998 8888886
No 81
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.36 E-value=0.04 Score=56.41 Aligned_cols=82 Identities=17% Similarity=0.167 Sum_probs=52.7
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
+++++|+|.|+ |++|+++++.|+..|. +++++|.+ ..+.+.+.+.+....+ -.++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~-~~~~ 64 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARS----------------------ASKLANLQKRWDAKYP-GRFE 64 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS----------------------HHHHHHHHHHHHHHST-TTEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCC----------------------cccHHHHHHHhhccCC-CceE
Confidence 56789999998 9999999999999995 66666542 1133334444443332 2334
Q ss_pred EE-ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 005745 441 GV-VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (679)
Q Consensus 441 ~~-~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (679)
.+ ..++ .+.+.+.+++++.|+||.+..
T Consensus 65 ~~~~~D~----------------~d~~~~~~~~~~~d~vih~A~ 92 (342)
T 1y1p_A 65 TAVVEDM----------------LKQGAYDEVIKGAAGVAHIAS 92 (342)
T ss_dssp EEECSCT----------------TSTTTTTTTTTTCSEEEECCC
T ss_pred EEEecCC----------------cChHHHHHHHcCCCEEEEeCC
Confidence 44 3333 233445566778999999864
No 82
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=95.35 E-value=0.082 Score=52.36 Aligned_cols=82 Identities=17% Similarity=0.133 Sum_probs=56.0
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
++++++|+|.|+ ||+|..+|+.|++.|.. +.++|.+ ..+.+.+++.+.+..+ ++
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~-V~~~~r~----------------------~~~~~~~~~~~~~~~~--~~ 60 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGAA-VVVADIN----------------------AEAAEAVAKQIVADGG--TA 60 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESC----------------------HHHHHHHHHHHHHTTC--EE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCC----------------------HHHHHHHHHHHHhcCC--cE
Confidence 467889999986 89999999999999964 7777652 2355666666766543 55
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 61 ~~~~~D~----------------~~~~~~~~~~~~~~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 61 ISVAVDV----------------SDPESAKAMADRTLAEFGGIDYLVNNAA 95 (253)
T ss_dssp EEEECCT----------------TSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEEccC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5555544 2333333333 37899999764
No 83
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.32 E-value=0.053 Score=55.97 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=32.5
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.|.+++|+|||+|.+|..+|+.|.+.|. +++++|.
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr 186 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGAR 186 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 5789999999999999999999999998 8988886
No 84
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.32 E-value=0.044 Score=60.46 Aligned_cols=92 Identities=17% Similarity=0.177 Sum_probs=65.6
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
.+++++|+|||.|.+|...++.|...| .+++++|.+.- .++ +.+.+ ...+++.
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~~~~~-------------~~~------------~~l~~-~~~i~~~ 61 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAG-ARLTVNALTFI-------------PQF------------TVWAN-EGMLTLV 61 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BEEEEEESSCC-------------HHH------------HHHHT-TTSCEEE
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCc-CEEEEEcCCCC-------------HHH------------HHHHh-cCCEEEE
Confidence 478999999999999999999999999 58999997311 011 11111 1233333
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeE
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKIT 502 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~ 502 (679)
. ..+ . .+.++++|+||-++|+.+....+-..|+++++|+
T Consensus 62 ~--~~~-----------------~----~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 62 E--GPF-----------------D----ETLLDSCWLAIAATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp E--SSC-----------------C----GGGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEE
T ss_pred E--CCC-----------------C----ccccCCccEEEEcCCCHHHHHHHHHHHHHcCCEE
Confidence 2 111 1 1235689999999999987888889999999996
No 85
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=95.32 E-value=0.02 Score=60.41 Aligned_cols=91 Identities=22% Similarity=0.287 Sum_probs=61.8
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
..|.+++|.|||+|.+|..+|+.|.+.|. ++..+|...- .. +.+.
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~~~--------------~~-------------------~~~~- 179 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRSRK--------------SW-------------------PGVE- 179 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESSCC--------------CC-------------------TTCE-
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCch--------------hh-------------------hhhh-
Confidence 56899999999999999999999999997 5666664210 00 0010
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC-ChHHHHHHHHHHHh---cCCeEEEEe
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD-TRESRWLPTLLCAN---TNKITITAA 506 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD-s~esR~lin~~~~~---~~kp~I~aa 506 (679)
.+. ....++++++++|+|+.++- +.++|.+++.-... .+..+||++
T Consensus 180 -~~~--------------------~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 229 (315)
T 3pp8_A 180 -SYV--------------------GREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLA 229 (315)
T ss_dssp -EEE--------------------SHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECS
T ss_pred -hhc--------------------ccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECC
Confidence 111 13567889999999999875 67788777543322 234566654
No 86
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=95.30 E-value=0.068 Score=52.66 Aligned_cols=61 Identities=21% Similarity=0.301 Sum_probs=44.0
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhC-CCc
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIF-PAV 437 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~in-P~v 437 (679)
..+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.+ ..+.+.+++.+++.. +.+
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~~~~ 66 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRT----------------------EASLAEVSDQIKSAGQPQP 66 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHTTSCCC
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecC----------------------HHHHHHHHHHHHhcCCCCc
Confidence 5678999999986 8999999999999997 57777753 234556666666654 445
Q ss_pred EEEEEe
Q 005745 438 AAEGVV 443 (679)
Q Consensus 438 ~v~~~~ 443 (679)
.+....
T Consensus 67 ~~~~~d 72 (247)
T 3i1j_A 67 LIIALN 72 (247)
T ss_dssp EEEECC
T ss_pred eEEEec
Confidence 544443
No 87
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=95.29 E-value=0.065 Score=52.76 Aligned_cols=35 Identities=20% Similarity=0.346 Sum_probs=29.6
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r 43 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDI 43 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcC
Confidence 467889999986 8999999999999996 6777764
No 88
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.26 E-value=0.046 Score=56.00 Aligned_cols=32 Identities=31% Similarity=0.433 Sum_probs=29.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+||.|||+|..|+.+|..|+..|. +++++|.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 689999999999999999999997 78888763
No 89
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.25 E-value=0.053 Score=53.13 Aligned_cols=37 Identities=14% Similarity=0.261 Sum_probs=28.8
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
-++...+|.|||+|.+|+.+|+.|++.|. +++++|.+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 34677899999999999999999999995 68887753
No 90
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.23 E-value=0.034 Score=57.09 Aligned_cols=32 Identities=22% Similarity=0.432 Sum_probs=28.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.||.|||+|.+|+.+|+.|+..|. +++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 589999999999999999999996 78887763
No 91
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=95.23 E-value=0.093 Score=51.63 Aligned_cols=35 Identities=26% Similarity=0.442 Sum_probs=29.2
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ |++|..+++.|+..|. ++.++|.
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r 39 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGA-KVGLHGR 39 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECC
Confidence 367788999975 8999999999999996 5777765
No 92
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.22 E-value=0.042 Score=55.98 Aligned_cols=31 Identities=35% Similarity=0.575 Sum_probs=27.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.||+|||+|.+|+.+|..|++.|. +++++|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEEC
Confidence 489999999999999999999995 7888775
No 93
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.19 E-value=0.032 Score=59.08 Aligned_cols=37 Identities=22% Similarity=0.420 Sum_probs=32.7
Q ss_pred HHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 359 LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 359 q~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
...|.+++|.|||+|.+|..+|+.|.+.|. ++..+|.
T Consensus 132 ~~~l~gktvGIiGlG~IG~~vA~~l~~~G~-~V~~~dr 168 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQIGQSLAAKASALGM-HVIGVNT 168 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CccccCCeEEEECcCHHHHHHHHHHHhCCC-EEEEECC
Confidence 356899999999999999999999999997 6777775
No 94
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=95.16 E-value=0.098 Score=53.01 Aligned_cols=38 Identities=21% Similarity=0.408 Sum_probs=32.1
Q ss_pred hHHhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 358 NLDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 358 gq~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
....+++++|+|.|+ ||+|.++++.|+..|. ++.++|.
T Consensus 22 ~~~~~~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r 60 (286)
T 1xu9_A 22 RPEMLQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTAR 60 (286)
T ss_dssp CGGGGTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ChhhcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 345678899999987 8999999999999996 6777766
No 95
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=95.15 E-value=0.099 Score=51.70 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=29.5
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ |++|..+++.|+..|. ++.++|.
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r 45 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADL 45 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 357889999975 8999999999999996 6777764
No 96
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.15 E-value=0.031 Score=58.08 Aligned_cols=37 Identities=22% Similarity=0.272 Sum_probs=31.3
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
...+..||.|||+|.+|+.+|++|+..|. +++++|.+
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~ 53 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRT 53 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 34455789999999999999999999996 78888874
No 97
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.14 E-value=0.04 Score=56.27 Aligned_cols=32 Identities=31% Similarity=0.383 Sum_probs=28.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..||.|||+|.+|+.+++.|+..|. +++++|.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGV-TVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTC-EEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeC
Confidence 3589999999999999999999996 6777765
No 98
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=95.11 E-value=0.11 Score=54.28 Aligned_cols=33 Identities=33% Similarity=0.377 Sum_probs=28.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC---CEEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGV---RKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV---g~ItlVD~ 396 (679)
..||.|||+|.+|+.+|..|++.|+ .+++++|.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 3489999999999999999999995 56777764
No 99
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=95.09 E-value=0.022 Score=59.43 Aligned_cols=36 Identities=25% Similarity=0.484 Sum_probs=32.2
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..|.+++|.|||+|.+|..+|+.|.+.|. +++.+|.
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr 153 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTR 153 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECS
T ss_pred eeeecchheeeccCchhHHHHHHHHhhCc-EEEEEec
Confidence 56899999999999999999999999997 6777665
No 100
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=95.06 E-value=0.076 Score=53.70 Aligned_cols=91 Identities=12% Similarity=0.101 Sum_probs=56.5
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+ ..|.+.+.+.|++..+ .++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~-~~~ 64 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRD----------------------VTKGHEAVEKLKNSNH-ENV 64 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHTTTC-CSE
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhcCC-Cce
Confidence 467888999986 8999999999999997 67777652 2356666777776653 345
Q ss_pred EEEecccCCCCCCCCCccc-cccccChhhHHHhhccCCEEEEeCCC
Q 005745 440 EGVVMAIPMPGHPVPCQEE-DSVLDDCRRLTDLILSHDVIFLLTDT 484 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~-~~~~~~~~~l~~li~~~DvV~~~tDs 484 (679)
..+..++ ++ . +....-.+.+.+.+...|+||.+..-
T Consensus 65 ~~~~~Dl-------~~--~~~~v~~~~~~~~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 65 VFHQLDV-------TD--PIATMSSLADFIKTHFGKLDILVNNAGV 101 (311)
T ss_dssp EEEECCT-------TS--CHHHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred EEEEccC-------CC--cHHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 6666554 10 0 11111112223334578999998763
No 101
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.04 E-value=0.052 Score=57.30 Aligned_cols=36 Identities=25% Similarity=0.494 Sum_probs=32.1
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
++..||.|+|+|.+|+.+|..|+..|+++|.++|-+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~ 38 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIA 38 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 456799999999999999999999998889998873
No 102
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=95.04 E-value=0.096 Score=52.32 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=29.0
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVAR 39 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 56788999975 8999999999999996 6777765
No 103
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.03 E-value=0.083 Score=55.05 Aligned_cols=31 Identities=26% Similarity=0.296 Sum_probs=28.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.||+|||+|.+|+.+|..|++.|. +++++|.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r 35 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDI 35 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 589999999999999999999995 5888876
No 104
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.03 E-value=0.054 Score=55.34 Aligned_cols=32 Identities=25% Similarity=0.505 Sum_probs=28.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.||.|||+|.+|+.+|++|+..|. +++++|.+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCC
Confidence 589999999999999999999995 78888764
No 105
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=95.02 E-value=0.062 Score=55.95 Aligned_cols=63 Identities=21% Similarity=0.285 Sum_probs=45.9
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.+ ..|.+.+++.+....++.++
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~----------------------~~~~~~~~~~l~~~~~~~~~ 61 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIR----------------------QDSIDKALATLEAEGSGPEV 61 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHHTCGGGE
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHhcCCCCeE
Confidence 367889999986 8999999999999997 57776652 23555666666666665566
Q ss_pred EEEeccc
Q 005745 440 EGVVMAI 446 (679)
Q Consensus 440 ~~~~~~I 446 (679)
..+..++
T Consensus 62 ~~~~~Dl 68 (319)
T 3ioy_A 62 MGVQLDV 68 (319)
T ss_dssp EEEECCT
T ss_pred EEEECCC
Confidence 6666554
No 106
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=94.93 E-value=0.16 Score=48.96 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=59.8
Q ss_pred CeEEEEcC-ChHHHHHHHHHH-HcCCCEEEEEeCCccCccCCCcCccCCcc-cccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 365 RKCLLLGA-GTLGCQVARMLM-AWGVRKITLLDNGRVAMSNPLRQSLYTLD-DCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La-~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~-Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
++|+|.|+ |++|..+++.|+ ..|. ++++++.+. + .+ +. +.+..+. ++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~--------------~~~~--------~~----~~~~~~~--~~~ 56 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQL--------------KTRI--------PP----EIIDHER--VTV 56 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSH--------------HHHS--------CH----HHHTSTT--EEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCc--------------cccc--------hh----hccCCCc--eEE
Confidence 45999995 999999999999 8897 777777631 1 11 11 1112333 344
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCC--hHHHHHHHHHHHhcCC-eEEEE
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT--RESRWLPTLLCANTNK-ITITA 505 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs--~esR~lin~~~~~~~k-p~I~a 505 (679)
+..++ .+.+.+.++++++|+||.+... ..++.++..+ .+.+. -+|+.
T Consensus 57 ~~~D~----------------~d~~~~~~~~~~~d~vv~~ag~~n~~~~~~~~~~-~~~~~~~iv~i 106 (221)
T 3r6d_A 57 IEGSF----------------QNPGXLEQAVTNAEVVFVGAMESGSDMASIVKAL-SRXNIRRVIGV 106 (221)
T ss_dssp EECCT----------------TCHHHHHHHHTTCSEEEESCCCCHHHHHHHHHHH-HHTTCCEEEEE
T ss_pred EECCC----------------CCHHHHHHHHcCCCEEEEcCCCCChhHHHHHHHH-HhcCCCeEEEE
Confidence 44443 3567788889999999998864 2345544443 44443 45553
No 107
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=94.92 E-value=0.036 Score=57.89 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=31.2
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHc-CCCEEEEEeC
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~-GVg~ItlVD~ 396 (679)
...++|+|||+|..|..++++|+.. |+.+++++|.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 4567999999999999999999987 8889998775
No 108
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.91 E-value=0.14 Score=49.34 Aligned_cols=32 Identities=25% Similarity=0.423 Sum_probs=28.2
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
++|+|.|+ |.+|..+++.|+..| -++++++.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVRH 37 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcC
Confidence 68999995 999999999999999 578888774
No 109
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.91 E-value=0.055 Score=57.29 Aligned_cols=33 Identities=30% Similarity=0.522 Sum_probs=30.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
..||.|+|+|.+|+.+|..|+..|+ ++|+++|.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~ 38 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDV 38 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEec
Confidence 4689999999999999999999997 68999886
No 110
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=94.90 E-value=0.063 Score=56.86 Aligned_cols=34 Identities=26% Similarity=0.558 Sum_probs=30.9
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
...||.|+|+|.+|+.+|..|+..|+ ++|.|+|.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 45799999999999999999999998 68999886
No 111
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=94.90 E-value=0.048 Score=54.61 Aligned_cols=31 Identities=13% Similarity=0.246 Sum_probs=27.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.||.|||+|.+|..+++.|...| ..++++|.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~v~~~~~ 34 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HELIISGS 34 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-CeEEEECC
Confidence 48999999999999999999998 46777765
No 112
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.89 E-value=0.2 Score=50.59 Aligned_cols=97 Identities=16% Similarity=0.177 Sum_probs=59.8
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCC--cHHHHHHHHHHhhCCCcEEE
Q 005745 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGD--FKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk--~KAeaaae~L~~inP~v~v~ 440 (679)
.++|+|.|+ |.+|..+++.|+..|. +++.++.+.- .- .. .|++.+ +.+.. +++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~--------------~~---~~~~~~~~~~-~~l~~--~~v~~- 59 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTI--------------TA---ANPETKEELI-DNYQS--LGVIL- 59 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSC--------------CS---SCHHHHHHHH-HHHHH--TTCEE-
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCc--------------cc---CChHHHHHHH-HHHHh--CCCEE-
Confidence 468999997 9999999999999994 5666665310 00 11 233332 22322 34544
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh--HHHHHHHHHHHhcC
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR--ESRWLPTLLCANTN 499 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~--esR~lin~~~~~~~ 499 (679)
+..++ .+.+.+.+.++++|+||.+.... ..-..+-++|.+.+
T Consensus 60 -v~~D~----------------~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g 103 (307)
T 2gas_A 60 -LEGDI----------------NDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAG 103 (307)
T ss_dssp -EECCT----------------TCHHHHHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHC
T ss_pred -EEeCC----------------CCHHHHHHHHhCCCEEEECCcccccccHHHHHHHHHhcC
Confidence 33333 35677888999999999988642 22223344566665
No 113
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=94.88 E-value=0.077 Score=55.79 Aligned_cols=74 Identities=20% Similarity=0.151 Sum_probs=55.9
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
..++|+|||+|+.|...++.|... ++.+++++|. ...|++.+++.+.... +.+.
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r----------------------~~~~a~~la~~~~~~~--~~~~- 178 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV----------------------REKAAKKFVSYCEDRG--ISAS- 178 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS----------------------SHHHHHHHHHHHHHTT--CCEE-
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC----------------------CHHHHHHHHHHHHhcC--ceEE-
Confidence 467999999999999999999884 6899998775 3447888887776532 2222
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (679)
+ +.+++.+ ++|+|+.||-+.
T Consensus 179 ~-----------------------~~~~e~v-~aDvVi~aTp~~ 198 (322)
T 1omo_A 179 V-----------------------QPAEEAS-RCDVLVTTTPSR 198 (322)
T ss_dssp E-----------------------CCHHHHT-SSSEEEECCCCS
T ss_pred E-----------------------CCHHHHh-CCCEEEEeeCCC
Confidence 2 2345677 899999999874
No 114
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.86 E-value=0.12 Score=53.64 Aligned_cols=102 Identities=16% Similarity=0.081 Sum_probs=63.2
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
+..++|+|.|+ |.+|..+++.|+..| .++++++.+.- - ...|++.+ +.+.. +++++.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~---------------~---~~~~~~~~-~~l~~--~~v~~~ 65 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGP---------------R---SPSKAKIF-KALED--KGAIIV 65 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSC---------------C---CHHHHHHH-HHHHH--TTCEEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCC---------------C---ChhHHHHH-HHHHh--CCcEEE
Confidence 34578999998 999999999999999 56777665320 0 11133322 22222 345543
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhc--cCCEEEEeCCC--hHHHHHHHHHHHhcC-CeEE
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDT--RESRWLPTLLCANTN-KITI 503 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs--~esR~lin~~~~~~~-kp~I 503 (679)
. .++ .+.+.+.++++ ++|+||.+... ...-.-+-++|.+.+ +..+
T Consensus 66 ~--~Dl----------------~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 66 Y--GLI----------------NEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp E--CCT----------------TCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred E--eec----------------CCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 3 332 35778888999 99999998874 333344455666666 5433
No 115
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=94.84 E-value=0.095 Score=53.60 Aligned_cols=34 Identities=26% Similarity=0.500 Sum_probs=28.2
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ |++|..+++.|+..|. +++++|.
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r 35 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADR 35 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEEC
Confidence 35689999998 9999999999999994 7777765
No 116
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=94.81 E-value=0.032 Score=57.63 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=27.1
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCC-EEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVR-KITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg-~ItlVD~ 396 (679)
++.++|+|.|+ |.+|..+++.|+..|.. +++.+|.
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence 45678999998 99999999999999943 4555554
No 117
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=94.81 E-value=0.098 Score=52.42 Aligned_cols=83 Identities=20% Similarity=0.203 Sum_probs=56.0
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcE
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~ 438 (679)
..+++++|+|.|+ ||+|..+|+.|+..|.. +.++|.+ ..+.+.+.+.+.+..+ +
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~----------------------~~~~~~~~~~~~~~~~--~ 79 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGAR-VVLTARD----------------------VEKLRAVEREIVAAGG--E 79 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESC----------------------HHHHHHHHHHHHHTTC--E
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEECC----------------------HHHHHHHHHHHHHhCC--c
Confidence 3477889999985 89999999999999974 7777652 2355666666766543 5
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHh-------hccCCEEEEeCC
Q 005745 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDL-------ILSHDVIFLLTD 483 (679)
Q Consensus 439 v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~l-------i~~~DvV~~~tD 483 (679)
+..+..++ .+.+.+.++ +...|+||.+..
T Consensus 80 ~~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 80 AESHACDL----------------SHSDAIAAFATGVLAAHGRCDVLVNNAG 115 (262)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred eeEEEecC----------------CCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 55555544 123333333 345899998765
No 118
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=94.80 E-value=0.13 Score=52.30 Aligned_cols=36 Identities=14% Similarity=0.411 Sum_probs=30.6
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+++++|+|.|+ |++|.++|+.|+..|. +++++|.
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r 50 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASR 50 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4688899999975 7999999999999996 5777765
No 119
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.78 E-value=0.059 Score=57.56 Aligned_cols=103 Identities=17% Similarity=0.141 Sum_probs=63.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHH-H-hhCCCcEEEE
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSL-E-RIFPAVAAEG 441 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L-~-~inP~v~v~~ 441 (679)
..||.|||+|..|+.+|..|++.|. +++++|.+. .+++.+.+.- . +..|++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~----------------------~~~~~i~~~~~~~~~l~g~~--- 82 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYES----------------------DHVDEMQAEGVNNRYLPNYP--- 82 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCH----------------------HHHHHHHHHSSBTTTBTTCC---
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH----------------------HHHHHHHHcCCCcccCCCCc---
Confidence 4689999999999999999999994 577766531 1222222210 0 0112221
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHh--cCCeEEEEeeC
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN--TNKITITAALG 508 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~--~~kp~I~aalG 508 (679)
+.. .. ....++.+.++++|+||.++-+...+..+..+... .+.++|++.-|
T Consensus 83 -----------l~~----~i-~~t~d~~ea~~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kG 135 (356)
T 3k96_A 83 -----------FPE----TL-KAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKG 135 (356)
T ss_dssp -----------CCT----TE-EEESCHHHHHTTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEECCCS
T ss_pred -----------cCC----Ce-EEECCHHHHHhcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 110 00 01234556788999999999888778777777643 35677776433
No 120
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=94.73 E-value=0.088 Score=53.46 Aligned_cols=37 Identities=14% Similarity=0.314 Sum_probs=31.2
Q ss_pred HHhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 359 q~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
...+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r 58 (302)
T 1w6u_A 21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASR 58 (302)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 35688899999975 7999999999999996 5777765
No 121
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=94.73 E-value=0.22 Score=50.47 Aligned_cols=98 Identities=12% Similarity=0.062 Sum_probs=59.9
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
+|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.-......+..+.. ....+.+.+++.+.... .++
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~--~~~ 78 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPA------STPEDLAETADLVKGHN--RRI 78 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCC------CCHHHHHHHHHHHHTTT--CCE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecccccccccccccccc------CCHHHHHHHHHHHhhcC--Cce
Confidence 477899999986 6899999999999996 5788887532222221111111 02335566666666654 345
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 79 ~~~~~Dv----------------~~~~~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 79 VTAEVDV----------------RDYDALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEEcCC----------------CCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 5555544 2333333333 47899998765
No 122
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=94.72 E-value=0.036 Score=56.48 Aligned_cols=30 Identities=27% Similarity=0.486 Sum_probs=26.7
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
||.|||+|.+|+.+++.|++.|. +++++|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~ 31 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDV 31 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECS
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeC
Confidence 79999999999999999999996 5777765
No 123
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=94.71 E-value=0.14 Score=53.98 Aligned_cols=38 Identities=29% Similarity=0.398 Sum_probs=32.3
Q ss_pred hHHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 358 NLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 358 gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+...|+..+|.|||+|.+|..+|+.|...|+ +++++|.
T Consensus 10 ~~~~l~~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~ 47 (338)
T 1np3_A 10 DLSIIQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLR 47 (338)
T ss_dssp CHHHHHTSCEEEECCSHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CcchhcCCEEEEECchHHHHHHHHHHHHCcC-EEEEEEC
Confidence 3466888999999999999999999999996 5666664
No 124
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.71 E-value=0.087 Score=54.60 Aligned_cols=33 Identities=18% Similarity=0.440 Sum_probs=28.7
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
...+|.|||+|..|..+|++|++.|. +++++|.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 45789999999999999999999996 5777665
No 125
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.70 E-value=0.11 Score=52.11 Aligned_cols=62 Identities=18% Similarity=0.259 Sum_probs=43.9
Q ss_pred hhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.+++++|+|.| .||+|..+|+.|+..|. ++.++|.+ ..+.+.+++.+++.. ..++
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~-~~~~ 62 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRS----------------------TADIDACVADLDQLG-SGKV 62 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHTTS-SSCE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhhC-CCcE
Confidence 46788999997 57999999999999997 67787762 234555666666543 2355
Q ss_pred EEEeccc
Q 005745 440 EGVVMAI 446 (679)
Q Consensus 440 ~~~~~~I 446 (679)
..+..++
T Consensus 63 ~~~~~Dv 69 (262)
T 3pk0_A 63 IGVQTDV 69 (262)
T ss_dssp EEEECCT
T ss_pred EEEEcCC
Confidence 5665544
No 126
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=94.68 E-value=0.089 Score=52.70 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=28.3
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDW 39 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEEC
Confidence 46788999975 7999999999999995 5777664
No 127
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.65 E-value=0.062 Score=52.95 Aligned_cols=93 Identities=15% Similarity=0.178 Sum_probs=56.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEE-EeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITL-LDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~Itl-VD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
-.||.|||+|.+|..+|+.|++.|. ++++ +|. ...|++.+++.+. +.+..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~-~V~~v~~r----------------------~~~~~~~l~~~~g-----~~~~~- 73 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQI-PAIIANSR----------------------GPASLSSVTDRFG-----ASVKA- 73 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTC-CEEEECTT----------------------CGGGGHHHHHHHT-----TTEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECC----------------------CHHHHHHHHHHhC-----CCccc-
Confidence 3589999999999999999999996 3444 343 1223444433321 11110
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEEeeCc
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAALGF 509 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~aalG~ 509 (679)
.. .+.++++|+||.|+-....+-++..+....++.+|+.+-|+
T Consensus 74 -----------------------~~-~~~~~~aDvVilavp~~~~~~v~~~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 74 -----------------------VE-LKDALQADVVILAVPYDSIADIVTQVSDWGGQIVVDASNAI 116 (220)
T ss_dssp -----------------------CC-HHHHTTSSEEEEESCGGGHHHHHTTCSCCTTCEEEECCCCB
T ss_pred -----------------------Ch-HHHHhcCCEEEEeCChHHHHHHHHHhhccCCCEEEEcCCCC
Confidence 11 13367899999999866555555443322356777765443
No 128
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=94.65 E-value=0.06 Score=57.37 Aligned_cols=90 Identities=16% Similarity=0.216 Sum_probs=56.0
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
..|.+++|.|||+|.+|..+|+.|.+.|. ++..+|...-. .. +.
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~-------------~~---~~------------------- 210 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRSTLS-------------GV---DW------------------- 210 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCT-------------TS---CC-------------------
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCccc-------------cc---Cc-------------------
Confidence 46899999999999999999999999997 57776642110 01 10
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC-ChHHHHHHHHHH---HhcCCeEEEEeeC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD-TRESRWLPTLLC---ANTNKITITAALG 508 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD-s~esR~lin~~~---~~~~kp~I~aalG 508 (679)
.. ...++++++++|+|+.++- +.++|.+++.-. .+.+..+||++-|
T Consensus 211 ~~-----------------------~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG 260 (340)
T 4dgs_A 211 IA-----------------------HQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARG 260 (340)
T ss_dssp EE-----------------------CSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC
T ss_pred ee-----------------------cCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence 00 1245678899999999876 667888774322 2345677887544
No 129
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.64 E-value=0.27 Score=50.90 Aligned_cols=86 Identities=13% Similarity=0.102 Sum_probs=54.9
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhh-CCCcE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI-FPAVA 438 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~i-nP~v~ 438 (679)
.++.++|+|.|+ |.+|..+++.|+..|. +++++|...- . ...+.+.+.+.+... .+.
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~------~------------~~~~~~~~~~~~~~~~~~~-- 82 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFAT------G------------HQRNLDEVRSLVSEKQWSN-- 82 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSS------C------------CHHHHHHHHHHSCHHHHTT--
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCc------c------------chhhHHHHhhhcccccCCc--
Confidence 356789999998 9999999999999995 6777775311 0 011222222222111 133
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 005745 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (679)
Q Consensus 439 v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (679)
++.+..++ .+.+.+.+++++.|+||.+..
T Consensus 83 ~~~~~~Dl----------------~d~~~~~~~~~~~d~vih~A~ 111 (352)
T 1sb8_A 83 FKFIQGDI----------------RNLDDCNNACAGVDYVLHQAA 111 (352)
T ss_dssp EEEEECCT----------------TSHHHHHHHHTTCSEEEECCS
T ss_pred eEEEECCC----------------CCHHHHHHHhcCCCEEEECCc
Confidence 34444433 345677888899999999875
No 130
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.63 E-value=0.14 Score=54.15 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=30.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.||.|||+|..|..+|..|+..|...++++|.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998559999874
No 131
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.61 E-value=0.27 Score=48.23 Aligned_cols=95 Identities=13% Similarity=0.129 Sum_probs=60.3
Q ss_pred CCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
.++|+|.| .|++|..+++.|+..|--++++++.+.-... .. - .+ .++.+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~-----------~~---~--------------~~--~~~~~ 72 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH-----------KP---Y--------------PT--NSQII 72 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC-----------SS---C--------------CT--TEEEE
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc-----------cc---c--------------cC--CcEEE
Confidence 46899999 5999999999999999557888776431110 01 0 01 23444
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChH----HHHHHHHHHHhcCC-eEEEE
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE----SRWLPTLLCANTNK-ITITA 505 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e----sR~lin~~~~~~~k-p~I~a 505 (679)
..++ .+.+.+.++++++|+||.+..... ++.++. .+.+.+. -+|+.
T Consensus 73 ~~Dl----------------~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~-~~~~~~~~~iV~i 123 (236)
T 3qvo_A 73 MGDV----------------LNHAALKQAMQGQDIVYANLTGEDLDIQANSVIA-AMKACDVKRLIFV 123 (236)
T ss_dssp ECCT----------------TCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHHH-HHHHTTCCEEEEE
T ss_pred EecC----------------CCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHHH-HHHHcCCCEEEEE
Confidence 4443 356778889999999998776533 333333 3444453 45554
No 132
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.58 E-value=0.073 Score=56.75 Aligned_cols=35 Identities=26% Similarity=0.462 Sum_probs=31.2
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
+.+.||.|||+ |.+|+.+|..|+..|. .+|.++|-
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi 42 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP 42 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC
Confidence 45789999998 9999999999999997 58998886
No 133
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=94.56 E-value=0.17 Score=52.45 Aligned_cols=93 Identities=20% Similarity=0.179 Sum_probs=61.7
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcE
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~ 438 (679)
..+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.+.- +.|.. .- ...+.+.+++.+.+.. .+
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~----~~~~~-----~~---~~~~~~~~~~~~~~~~--~~ 87 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVG----LDGSP-----AS---GGSAAQSVVDEITAAG--GE 87 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBC----TTSSB-----TC---TTSHHHHHHHHHHHTT--CE
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCccc----ccccc-----cc---cHHHHHHHHHHHHhcC--Cc
Confidence 4578889999975 7999999999999996 7888887532 11211 11 3456777777777764 35
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 439 v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
+..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 88 ~~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lv~nAg 123 (322)
T 3qlj_A 88 AVADGSNV----------------ADWDQAAGLIQTAVETFGGLDVLVNNAG 123 (322)
T ss_dssp EEEECCCT----------------TSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred EEEEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55665544 2334444443 37899998765
No 134
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=94.56 E-value=0.18 Score=51.13 Aligned_cols=36 Identities=25% Similarity=0.332 Sum_probs=30.5
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
-.|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 64 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAAR 64 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3578899999985 7999999999999996 5777775
No 135
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.55 E-value=0.088 Score=53.03 Aligned_cols=89 Identities=15% Similarity=0.229 Sum_probs=55.8
Q ss_pred hhcCCeEEEEcCC---hHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCc
Q 005745 361 ILSSRKCLLLGAG---TLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAV 437 (679)
Q Consensus 361 kL~~~kVlIvGaG---gLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v 437 (679)
.|+++.++|-|++ |+|-.+|+.|++.|. ++.++|.+ ..+.+.+++.+.+.. ..
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~----------------------~~~~~~~~~~~~~~~-~~ 58 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRK----------------------ERSRKELEKLLEQLN-QP 58 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESS----------------------GGGHHHHHHHHGGGT-CS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHhcC-CC
Confidence 4789999999984 799999999999996 68887752 113444556666654 33
Q ss_pred EEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeC
Q 005745 438 AAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLT 482 (679)
Q Consensus 438 ~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~t 482 (679)
++..+..++ + +.++...-.+...+.+...|++|...
T Consensus 59 ~~~~~~~Dv-------~--~~~~v~~~~~~~~~~~G~iD~lvnnA 94 (256)
T 4fs3_A 59 EAHLYQIDV-------Q--SDEEVINGFEQIGKDVGNIDGVYHSI 94 (256)
T ss_dssp SCEEEECCT-------T--CHHHHHHHHHHHHHHHCCCSEEEECC
T ss_pred cEEEEEccC-------C--CHHHHHHHHHHHHHHhCCCCEEEecc
Confidence 444555444 1 11112222233344456788888764
No 136
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.54 E-value=0.18 Score=50.94 Aligned_cols=97 Identities=23% Similarity=0.234 Sum_probs=59.2
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
.++|+|.|+ |.+|..+++.|+..| .+++.++.+.-.. | ...|++.+ +.+. .+++++ +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~----~------------~~~~~~~~-~~l~--~~~v~~--v 61 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTAS----S------------NSEKAQLL-ESFK--ASGANI--V 61 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTT----T------------THHHHHHH-HHHH--TTTCEE--E
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccc----c------------CHHHHHHH-HHHH--hCCCEE--E
Confidence 468999997 999999999999999 4566655421100 0 01133222 1222 244544 3
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChH---HHHHHHHHHHhcC
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE---SRWLPTLLCANTN 499 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e---sR~lin~~~~~~~ 499 (679)
..++ .+.+.+.+.++++|+||.+..... .+. +-++|.+.+
T Consensus 62 ~~D~----------------~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~-l~~aa~~~g 104 (308)
T 1qyc_A 62 HGSI----------------DDHASLVEAVKNVDVVISTVGSLQIESQVN-IIKAIKEVG 104 (308)
T ss_dssp CCCT----------------TCHHHHHHHHHTCSEEEECCCGGGSGGGHH-HHHHHHHHC
T ss_pred Eecc----------------CCHHHHHHHHcCCCEEEECCcchhhhhHHH-HHHHHHhcC
Confidence 3322 356778888999999999987532 333 345566665
No 137
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.54 E-value=0.13 Score=51.56 Aligned_cols=33 Identities=42% Similarity=0.540 Sum_probs=28.4
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+.++|+|.|+|.+|+.+++.|+..|. +++.++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r 34 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH-EVTGLRR 34 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 45789999999999999999999996 6666655
No 138
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.53 E-value=0.062 Score=52.85 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=27.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+|+|||+|.+|..+++.|+..|. +++++|.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~-~V~~~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGF-KVVVGSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4689999999999999999999996 5777765
No 139
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.53 E-value=0.077 Score=55.37 Aligned_cols=34 Identities=24% Similarity=0.441 Sum_probs=30.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
..||.|||+|.+|+.+|..|+..|...++++|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 3689999999999999999999998679999874
No 140
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=94.49 E-value=0.11 Score=51.65 Aligned_cols=36 Identities=28% Similarity=0.386 Sum_probs=30.4
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
++|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r 38 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDI 38 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3578899999986 7999999999999996 5777665
No 141
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.49 E-value=0.27 Score=49.63 Aligned_cols=96 Identities=20% Similarity=0.094 Sum_probs=60.0
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcE
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~ 438 (679)
..+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.-....+.. ... ...+.+.+++.+.+.. .+
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~----~~~-----~~~~~~~~~~~~~~~~--~~ 78 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTY----APA-----SPEDLDETARLVEDQG--RK 78 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCS----CCC-----CHHHHHHHHHHHHTTT--CC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccc----ccc-----CHHHHHHHHHHHHhcC--Ce
Confidence 3578899999975 7999999999999996 67778864321111111 100 2345666677776654 44
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 439 v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
+..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 79 ~~~~~~Dv----------------~~~~~v~~~~~~~~~~~g~id~lvnnAg 114 (280)
T 3pgx_A 79 ALTRVLDV----------------RDDAALRELVADGMEQFGRLDVVVANAG 114 (280)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred EEEEEcCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55555544 2333333333 47899998764
No 142
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=94.47 E-value=0.21 Score=50.55 Aligned_cols=63 Identities=25% Similarity=0.246 Sum_probs=44.6
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCC-CcE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFP-AVA 438 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP-~v~ 438 (679)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+ ..+.+.+++.+++... ..+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~~~~~ 64 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRN----------------------PDKLAGAVQELEALGANGGA 64 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHTTCCSSCE
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHHhCCCCce
Confidence 467889999974 7999999999999997 57777752 2345566666766543 235
Q ss_pred EEEEeccc
Q 005745 439 AEGVVMAI 446 (679)
Q Consensus 439 v~~~~~~I 446 (679)
+..+..++
T Consensus 65 ~~~~~~Dv 72 (281)
T 3svt_A 65 IRYEPTDI 72 (281)
T ss_dssp EEEEECCT
T ss_pred EEEEeCCC
Confidence 66666554
No 143
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.47 E-value=0.21 Score=55.20 Aligned_cols=98 Identities=19% Similarity=0.250 Sum_probs=71.2
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
-..++|+|+|.|-+|.++|+.|-. + .++++++. .+.|++.+++.| |.+.+-.
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~~-~-~~v~iIE~----------------------d~~r~~~la~~l----~~~~Vi~ 284 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLEQ-T-YSVKLIER----------------------NLQRAEKLSEEL----ENTIVFC 284 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHTT-T-SEEEEEES----------------------CHHHHHHHHHHC----TTSEEEE
T ss_pred ccccEEEEEcchHHHHHHHHHhhh-c-CceEEEec----------------------CHHHHHHHHHHC----CCceEEe
Confidence 346799999999999999999854 2 56777665 345677766654 4444322
Q ss_pred EecccCCCCCCCCCccccccccChhhHHH-hhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEE
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTD-LILSHDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~-li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~a 505 (679)
-. ..+.+-+.+ =++++|+++.+|++-|.-.+...+|+++|.+-+-+
T Consensus 285 GD------------------~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 285 GD------------------AADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp SC------------------TTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred cc------------------ccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 11 124444543 47899999999999999999999999999865433
No 144
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=94.46 E-value=0.085 Score=52.79 Aligned_cols=35 Identities=11% Similarity=0.313 Sum_probs=29.8
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 38 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGR 38 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 477889999976 7999999999999996 5777775
No 145
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=94.45 E-value=0.13 Score=52.02 Aligned_cols=37 Identities=19% Similarity=0.481 Sum_probs=31.7
Q ss_pred HHhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 359 q~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
...|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r 59 (277)
T 4fc7_A 22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASR 59 (277)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 45688999999986 5899999999999997 7778775
No 146
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=94.44 E-value=0.15 Score=52.37 Aligned_cols=82 Identities=22% Similarity=0.255 Sum_probs=55.2
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+.+.. .++
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~--~~~ 82 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVD----------------------QPALEQAVNGLRGQG--FDA 82 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHTT--CCE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHhcC--Cce
Confidence 467889999986 7899999999999996 57776652 235566666676654 345
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 83 ~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 83 HGVVCDV----------------RHLDEMVRLADEAFRLLGGVDVVFSNAG 117 (301)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHSSCSEEEECCC
T ss_pred EEEEccC----------------CCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 5555444 2333333333 37899998764
No 147
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=94.43 E-value=0.1 Score=52.69 Aligned_cols=30 Identities=20% Similarity=0.369 Sum_probs=26.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+|.|||+|.+|+.+++.|+. |. +++++|.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECS
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeC
Confidence 379999999999999999999 86 4777764
No 148
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.42 E-value=0.12 Score=57.51 Aligned_cols=37 Identities=14% Similarity=0.332 Sum_probs=29.6
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
..+..++|.|||+|..|+.+|++|++.|. +++++|.+
T Consensus 11 ~~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r~ 47 (480)
T 2zyd_A 11 HHMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNRS 47 (480)
T ss_dssp ----CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred cccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 34667899999999999999999999997 57787764
No 149
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=94.42 E-value=0.064 Score=56.37 Aligned_cols=74 Identities=24% Similarity=0.247 Sum_probs=53.8
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
..++++|||+|..|...++.|... ++.+|+++|.+ |++..++.+.+.. ++.++.
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~------------------------~a~~la~~l~~~~-g~~~~~ 174 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY------------------------ASPEILERIGRRC-GVPARM 174 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT------------------------CCHHHHHHHHHHH-TSCEEE
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc------------------------HHHHHHHHHHHhc-CCeEEE
Confidence 367999999999999999999874 78999997763 4455555555432 233322
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (679)
. .+++.+.++|+||.||-+.
T Consensus 175 ~------------------------~~~eav~~aDIVi~aT~s~ 194 (313)
T 3hdj_A 175 A------------------------APADIAAQADIVVTATRST 194 (313)
T ss_dssp C------------------------CHHHHHHHCSEEEECCCCS
T ss_pred e------------------------CHHHHHhhCCEEEEccCCC
Confidence 1 3466788999999999763
No 150
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.41 E-value=0.11 Score=54.38 Aligned_cols=33 Identities=30% Similarity=0.582 Sum_probs=29.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
..||.|||+|.+|..+|..|+..|. ++|.++|.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di 39 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDA 39 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 3689999999999999999999884 78999986
No 151
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=94.41 E-value=0.17 Score=50.53 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=29.3
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r 39 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRR 39 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 57889999975 6899999999999997 5888776
No 152
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.41 E-value=0.24 Score=47.75 Aligned_cols=91 Identities=12% Similarity=0.120 Sum_probs=59.3
Q ss_pred eEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEec
Q 005745 366 KCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (679)
Q Consensus 366 kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~~ 444 (679)
||+|.| .|++|..+++.|+..| -++++++.+. +.. ... +. ++.+..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~~--------------~~~---~~~-------------~~--~~~~~~ 48 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD-YQIYAGARKV--------------EQV---PQY-------------NN--VKAVHF 48 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS-CEEEEEESSG--------------GGS---CCC-------------TT--EEEEEC
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCc--------------cch---hhc-------------CC--ceEEEe
Confidence 799998 7999999999999999 5788877642 111 010 23 334444
Q ss_pred ccCCCCCCCCCccccccccC-hhhHHHhhccCCEEEEeCCCh---------HHHHHHHHHHHhcCC-eEEEE
Q 005745 445 AIPMPGHPVPCQEEDSVLDD-CRRLTDLILSHDVIFLLTDTR---------ESRWLPTLLCANTNK-ITITA 505 (679)
Q Consensus 445 ~Ipm~gh~~~~~~~~~~~~~-~~~l~~li~~~DvV~~~tDs~---------esR~lin~~~~~~~k-p~I~a 505 (679)
++ .+ .+.+.+++++.|+||.+.... ..-..+-++|.+.+. .+|..
T Consensus 49 D~----------------~d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~ 104 (219)
T 3dqp_A 49 DV----------------DWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILL 104 (219)
T ss_dssp CT----------------TSCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred cc----------------cCCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEE
Confidence 33 24 667788889999999988643 223344555666664 45544
No 153
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=94.41 E-value=0.16 Score=50.65 Aligned_cols=35 Identities=20% Similarity=0.326 Sum_probs=29.5
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 46 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSR 46 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467888999974 7999999999999996 6777765
No 154
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=94.40 E-value=0.21 Score=49.61 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=29.2
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++++|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r 39 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGA-AVAIAAR 39 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 367889999975 7999999999999996 5777764
No 155
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=94.39 E-value=0.14 Score=51.93 Aligned_cols=32 Identities=31% Similarity=0.459 Sum_probs=27.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCC-EEEEEeC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVR-KITLLDN 396 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg-~ItlVD~ 396 (679)
++|.|||+|.+|..+|+.|...|.. +++++|.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4799999999999999999999963 6777765
No 156
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=94.38 E-value=0.24 Score=51.03 Aligned_cols=38 Identities=26% Similarity=0.397 Sum_probs=32.6
Q ss_pred HHhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 359 q~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.+.+++++|+|.|+ |++|.++++.|+..| -+++++|..
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r~ 53 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQG-HEILVIDNF 53 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEECC
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 46778889999997 999999999999999 478887763
No 157
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=94.38 E-value=0.24 Score=51.06 Aligned_cols=39 Identities=26% Similarity=0.261 Sum_probs=26.8
Q ss_pred hHHhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 358 NLDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 358 gq~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.+..+++++|||.|+ |.+|+.+++.|+..|. +++.+|..
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 52 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLR 52 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 467888999999998 9999999999999995 56666653
No 158
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.38 E-value=0.033 Score=58.32 Aligned_cols=32 Identities=31% Similarity=0.504 Sum_probs=27.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..||.|||+|..|+.+|..|++.|. +++++|.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~-~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGE-EVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-eEEEEeC
Confidence 4689999999999999999999994 6777665
No 159
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.36 E-value=0.1 Score=56.83 Aligned_cols=90 Identities=16% Similarity=0.201 Sum_probs=63.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~ 443 (679)
+.+|+|+|+|-+|..+++.|...|+ .+++||.|. .+++.+. +. ++.+ +.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~----------------------~~v~~~~----~~--g~~v--i~ 52 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDP----------------------DHIETLR----KF--GMKV--FY 52 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCH----------------------HHHHHHH----HT--TCCC--EE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCH----------------------HHHHHHH----hC--CCeE--EE
Confidence 4579999999999999999999996 688888742 1233222 21 2222 22
Q ss_pred cccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhcCC
Q 005745 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTNK 500 (679)
Q Consensus 444 ~~Ipm~gh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~lin~~~~~~~k 500 (679)
.+ ..+.+.+... ++++|+||.++++.+.-..+...++.++.
T Consensus 53 GD----------------at~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 53 GD----------------ATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP 94 (413)
T ss_dssp SC----------------TTCHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT
T ss_pred cC----------------CCCHHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCC
Confidence 11 1234555555 78899999999999988888888887764
No 160
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=94.34 E-value=0.13 Score=50.37 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=28.3
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ |++|..+++.|+..|. +++++|.
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r 39 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGT 39 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999975 7999999999999995 6777665
No 161
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=94.34 E-value=0.15 Score=51.66 Aligned_cols=88 Identities=23% Similarity=0.165 Sum_probs=53.6
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
+.+++|+|.|+ ||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+.+.. .++.
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~--~~~~ 56 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGA-KILLGARR----------------------QARIEAIATEIRDAG--GTAL 56 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESS----------------------HHHHHHHHHHHHHTT--CEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHhcC--CcEE
Confidence 45778889886 7999999999999996 47777652 235566666776653 4555
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (679)
.+..++ ++ .++...-.+.+.+.+...|++|.+..
T Consensus 57 ~~~~Dv-------~d--~~~v~~~~~~~~~~~g~iD~lVnnAG 90 (264)
T 3tfo_A 57 AQVLDV-------TD--RHSVAAFAQAAVDTWGRIDVLVNNAG 90 (264)
T ss_dssp EEECCT-------TC--HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEcCC-------CC--HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 555544 10 11111111222222347899998763
No 162
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.33 E-value=0.2 Score=51.90 Aligned_cols=32 Identities=38% Similarity=0.594 Sum_probs=29.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
.||.|||+|.+|+.+|..|+..|+ .+++++|.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~ 34 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDA 34 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcC
Confidence 479999999999999999999997 78999886
No 163
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=94.33 E-value=0.22 Score=48.78 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=27.9
Q ss_pred CCeEEEEc-CChHHHHHHHHHHHcCCC------EEEEEeC
Q 005745 364 SRKCLLLG-AGTLGCQVARMLMAWGVR------KITLLDN 396 (679)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg------~ItlVD~ 396 (679)
+++|+|.| .|++|.++++.|++.|.. ++.++|.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r 41 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR 41 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeC
Confidence 46788887 589999999999999986 7888765
No 164
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=94.30 E-value=0.12 Score=52.51 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=29.0
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+++++|+|.|+ |++|..+++.|+..|. ++.+++.
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r 76 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVS-HVICISR 76 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEES
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcC
Confidence 3567889999974 7999999999999995 5666654
No 165
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=94.30 E-value=0.25 Score=49.21 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=28.8
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 41 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSR 41 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56789999975 7999999999999996 5777765
No 166
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.28 E-value=0.23 Score=50.20 Aligned_cols=102 Identities=15% Similarity=0.153 Sum_probs=61.5
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
.++|+|.|+ |.+|..+++.|+..| .+++.++.+.- .. ...|++.+. .+. .+++++ +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~--------------~~---~~~~~~~~~-~~~--~~~~~~--~ 60 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEV--------------VS---NIDKVQMLL-YFK--QLGAKL--I 60 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCSCC--------------SS---CHHHHHHHH-HHH--TTTCEE--E
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECCCc--------------cc---chhHHHHHH-HHH--hCCeEE--E
Confidence 468999996 999999999999999 45666654210 00 011332221 122 344544 3
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh------HHHHHHHHHHHhcC-C-eEEE
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR------ESRWLPTLLCANTN-K-ITIT 504 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~------esR~lin~~~~~~~-k-p~I~ 504 (679)
..++ .+.+.+.+.++++|+||.+.... ..-..+-++|.+.+ + -+|.
T Consensus 61 ~~D~----------------~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~ 114 (313)
T 1qyd_A 61 EASL----------------DDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP 114 (313)
T ss_dssp CCCS----------------SCHHHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred eCCC----------------CCHHHHHHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEe
Confidence 3332 35677888899999999987643 22233445666666 4 3443
No 167
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.28 E-value=0.12 Score=53.91 Aligned_cols=39 Identities=18% Similarity=0.365 Sum_probs=29.3
Q ss_pred hHHhhcCCeEEEEc-CChHHHHHHHHHHHc-CCCEEEEEeCC
Q 005745 358 NLDILSSRKCLLLG-AGTLGCQVARMLMAW-GVRKITLLDNG 397 (679)
Q Consensus 358 gq~kL~~~kVlIvG-aGgLGs~VA~~La~~-GVg~ItlVD~D 397 (679)
|...++.++|+|.| .|.+|+.+++.|+.. |. +++.+|..
T Consensus 18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~ 58 (372)
T 3slg_A 18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQ 58 (372)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESC
T ss_pred CCcccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCC
Confidence 34567789999999 599999999999998 64 77777763
No 168
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.27 E-value=0.096 Score=53.37 Aligned_cols=31 Identities=23% Similarity=0.418 Sum_probs=27.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+|.|||+|.+|+.+++.|+..|. +++++|.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECS
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeC
Confidence 489999999999999999999996 5777765
No 169
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.27 E-value=0.19 Score=50.45 Aligned_cols=61 Identities=20% Similarity=0.189 Sum_probs=43.1
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.+ ..+.+.+++.+.+.. .++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~--~~~ 62 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAART----------------------VERLEDVAKQVTDTG--RRA 62 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHTT--CCE
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCC----------------------HHHHHHHHHHHHhcC--CcE
Confidence 478899999986 6899999999999996 47776652 225556666666653 345
Q ss_pred EEEeccc
Q 005745 440 EGVVMAI 446 (679)
Q Consensus 440 ~~~~~~I 446 (679)
..+..++
T Consensus 63 ~~~~~Dv 69 (264)
T 3ucx_A 63 LSVGTDI 69 (264)
T ss_dssp EEEECCT
T ss_pred EEEEcCC
Confidence 5555444
No 170
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=94.25 E-value=0.13 Score=50.67 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=28.4
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r 37 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTAT 37 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999975 7999999999999996 5667665
No 171
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=94.24 E-value=0.052 Score=57.38 Aligned_cols=36 Identities=14% Similarity=0.292 Sum_probs=31.7
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..|.+++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 146 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~ 181 (334)
T 2dbq_A 146 YDVYGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSR 181 (334)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cCCCCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECC
Confidence 46889999999999999999999999996 6777765
No 172
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=94.23 E-value=0.13 Score=52.39 Aligned_cols=31 Identities=29% Similarity=0.402 Sum_probs=25.4
Q ss_pred eEEEEcC-ChHHHHHHHHHHHc-CCCEEEEEeC
Q 005745 366 KCLLLGA-GTLGCQVARMLMAW-GVRKITLLDN 396 (679)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~-GVg~ItlVD~ 396 (679)
||+|+|| |..|..+++.+... |+.=..++|.
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~ 34 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA 34 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence 7999997 99999999998876 7655556665
No 173
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.23 E-value=0.1 Score=54.94 Aligned_cols=35 Identities=26% Similarity=0.375 Sum_probs=32.1
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+..||.|+|+|.+|+.+|..|+..|+++++++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 45799999999999999999999999899999984
No 174
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=94.19 E-value=0.12 Score=51.72 Aligned_cols=35 Identities=31% Similarity=0.486 Sum_probs=29.5
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 37 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADV 37 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 367889999986 8999999999999996 5777665
No 175
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=94.18 E-value=0.081 Score=52.44 Aligned_cols=36 Identities=28% Similarity=0.290 Sum_probs=30.0
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.+++++|+|.|+ |++|.++++.|+..|. +++++|.+
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~ 40 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLD 40 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 366789999975 7999999999999995 68887763
No 176
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=94.17 E-value=0.12 Score=51.42 Aligned_cols=63 Identities=16% Similarity=0.146 Sum_probs=46.7
Q ss_pred hhcCCeEEEEc-CChHHHHHHHHHHH---cCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCC
Q 005745 361 ILSSRKCLLLG-AGTLGCQVARMLMA---WGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPA 436 (679)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~---~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~ 436 (679)
.|++++++|.| .||+|..+|+.|+. .|. ++.++|.+ ..+.+.+++.+.+.+|+
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~~ 59 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARS----------------------ESMLRQLKEELGAQQPD 59 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESC----------------------HHHHHHHHHHHHHHCTT
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCC----------------------HHHHHHHHHHHHhhCCC
Confidence 35677888887 47999999999999 786 67776642 23456667777777777
Q ss_pred cEEEEEeccc
Q 005745 437 VAAEGVVMAI 446 (679)
Q Consensus 437 v~v~~~~~~I 446 (679)
.++..+..++
T Consensus 60 ~~~~~~~~Dv 69 (259)
T 1oaa_A 60 LKVVLAAADL 69 (259)
T ss_dssp SEEEEEECCT
T ss_pred CeEEEEecCC
Confidence 7888777655
No 177
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.17 E-value=0.14 Score=53.45 Aligned_cols=33 Identities=30% Similarity=0.431 Sum_probs=29.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCC-EEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVR-KITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg-~ItlVD~ 396 (679)
..||.|||+|.+|..+|+.|.+.|.. +++++|.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr 66 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDI 66 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 46899999999999999999999974 7888775
No 178
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=94.14 E-value=0.14 Score=51.64 Aligned_cols=30 Identities=23% Similarity=0.283 Sum_probs=27.1
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
||.|||+|.+|+.+++.|...|. +++++|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 31 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSR 31 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 79999999999999999999997 6777765
No 179
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=94.13 E-value=0.22 Score=49.30 Aligned_cols=34 Identities=26% Similarity=0.371 Sum_probs=28.8
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r 44 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDL 44 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 67889999975 7999999999999996 5777765
No 180
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=94.12 E-value=0.21 Score=50.39 Aligned_cols=95 Identities=20% Similarity=0.122 Sum_probs=59.6
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|...-..+...+. .. ...+.+.+++.+.+..+ ++
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~--~~ 75 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYD----PA-----SPDDLSETVRLVEAANR--RI 75 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSC----CC-----CHHHHHHHHHHHHHTTC--CE
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEecccccccccccc----cc-----CHHHHHHHHHHHHhcCC--eE
Confidence 578899999975 7999999999999997 677888753222222221 11 23355666666666544 45
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 76 ~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lvnnAg 110 (277)
T 3tsc_A 76 VAAVVDT----------------RDFDRLRKVVDDGVAALGRLDIIVANAG 110 (277)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5555444 2333333333 46899998764
No 181
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.11 E-value=0.17 Score=50.79 Aligned_cols=35 Identities=17% Similarity=0.360 Sum_probs=29.0
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
++++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 38 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGA-KVTITGR 38 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 366788888875 8999999999999996 6777765
No 182
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.11 E-value=0.082 Score=59.09 Aligned_cols=35 Identities=20% Similarity=0.467 Sum_probs=31.8
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+++|+|+|+|.+|..+|+.|...|. +++.+|.
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~ 305 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEI 305 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4678999999999999999999999997 7888776
No 183
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=94.10 E-value=0.085 Score=54.33 Aligned_cols=36 Identities=22% Similarity=0.373 Sum_probs=30.6
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.+
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~ 74 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARS 74 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 467888999975 7999999999999997 78887763
No 184
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.10 E-value=0.11 Score=52.83 Aligned_cols=86 Identities=13% Similarity=0.166 Sum_probs=57.8
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~ 443 (679)
.+|.|||+ |.+|+.+|+.|...|. +++++|.+ ..|++.+++ . ++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~----------------------~~~~~~~~~----~--g~~~---- 58 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIA----------------------PEGRDRLQG----M--GIPL---- 58 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCS----------------------HHHHHHHHH----T--TCCC----
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECC----------------------HHHHHHHHh----c--CCCc----
Confidence 48999999 9999999999999996 67777641 113333322 1 1111
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHh--cCCeEEEE
Q 005745 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN--TNKITITA 505 (679)
Q Consensus 444 ~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~--~~kp~I~a 505 (679)
. ...+.++++|+||.|+-....+.++..+... .+..+|+.
T Consensus 59 --------------------~--~~~~~~~~aDvVi~av~~~~~~~v~~~l~~~l~~~~ivv~~ 100 (286)
T 3c24_A 59 --------------------T--DGDGWIDEADVVVLALPDNIIEKVAEDIVPRVRPGTIVLIL 100 (286)
T ss_dssp --------------------C--CSSGGGGTCSEEEECSCHHHHHHHHHHHGGGSCTTCEEEES
T ss_pred --------------------C--CHHHHhcCCCEEEEcCCchHHHHHHHHHHHhCCCCCEEEEC
Confidence 0 1123567899999999887777777766543 35677764
No 185
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.08 E-value=0.33 Score=48.83 Aligned_cols=95 Identities=17% Similarity=0.055 Sum_probs=58.7
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcE
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~ 438 (679)
..|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.+.-...+- .. .....+.+.+++.+.+.. .+
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~--~~ 72 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNE---------YP-LATSRDLEEAGLEVEKTG--RK 72 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSC---------SC-CCCHHHHHHHHHHHHHTT--SC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccc---------cc-hhhhHHHHHHHHHHHhcC--Cc
Confidence 3578899999985 6999999999999996 578888653211110 00 002335566666666654 45
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 439 v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
+..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 73 ~~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 73 AYTAEVDV----------------RDRAAVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred eEEEEccC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55555544 2333333333 37899998754
No 186
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=94.06 E-value=0.22 Score=50.74 Aligned_cols=35 Identities=31% Similarity=0.308 Sum_probs=28.7
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.++++.|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGV-TVGALGR 60 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999975 7899999999999997 6777775
No 187
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=94.06 E-value=0.2 Score=55.31 Aligned_cols=32 Identities=13% Similarity=0.275 Sum_probs=28.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+|.|||+|..|+.+|++|++.|. +++++|.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY-TVAIYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcC
Confidence 3589999999999999999999997 5777765
No 188
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=94.04 E-value=0.2 Score=48.90 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=26.7
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.++|+|.|+ ||+|.++|+.|+..|.. +.++|.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~-V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYA-LALGAR 34 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 567889975 78999999999999964 777665
No 189
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=94.04 E-value=0.17 Score=52.97 Aligned_cols=106 Identities=13% Similarity=0.135 Sum_probs=63.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC------CEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHH--hhCCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGV------RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLE--RIFPA 436 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GV------g~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~--~inP~ 436 (679)
.||.|||+|.+|+.+|..|++.|. .+++++|.+.- .. ++.+++.+.+.-. ...|+
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~--------------~~---~~~~~~~l~~~~~~~~~~~~ 71 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED--------------IG---GKKLTEIINTQHENVKYLPG 71 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB--------------SS---SSBHHHHHHHHSCCTTTSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh--------------hh---hhHHHHHHHhcCcccccCCc
Confidence 489999999999999999999983 57888886421 01 2335544433210 00111
Q ss_pred cEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHh--cCCeEEEEe
Q 005745 437 VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN--TNKITITAA 506 (679)
Q Consensus 437 v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~--~~kp~I~aa 506 (679)
..+ ... . .......+.++++|+||.|+-....+.++..+... .+..+|+..
T Consensus 72 ~~~---~~~---------------~-~~~~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~ 124 (354)
T 1x0v_A 72 HKL---PPN---------------V-VAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLI 124 (354)
T ss_dssp CCC---CTT---------------E-EEESSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECC
T ss_pred ccC---ccC---------------e-EEEcCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEEC
Confidence 100 000 0 01123445678999999999876667766666433 355677653
No 190
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=94.04 E-value=0.15 Score=50.91 Aligned_cols=61 Identities=18% Similarity=0.199 Sum_probs=42.8
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.|++++|+|.|+ ||+|..+|+.|++.|.. +.++|.+ ..+.+.+++.+.+..+ ++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~----------------------~~~~~~~~~~~~~~~~--~~ 63 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGAS-VVVTDLK----------------------SEGAEAVAAAIRQAGG--KA 63 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCE-EEEEESS----------------------HHHHHHHHHHHHHTTC--CE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCC----------------------HHHHHHHHHHHHhcCC--cE
Confidence 467889999975 79999999999999975 7776652 2245566666766543 44
Q ss_pred EEEeccc
Q 005745 440 EGVVMAI 446 (679)
Q Consensus 440 ~~~~~~I 446 (679)
..+..++
T Consensus 64 ~~~~~Dv 70 (256)
T 3gaf_A 64 IGLECNV 70 (256)
T ss_dssp EEEECCT
T ss_pred EEEECCC
Confidence 5555444
No 191
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=94.04 E-value=0.22 Score=49.67 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=29.8
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 40 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGA-TVAIADI 40 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999975 7999999999999996 5777765
No 192
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=94.01 E-value=0.14 Score=51.48 Aligned_cols=91 Identities=22% Similarity=0.281 Sum_probs=55.2
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcE
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~ 438 (679)
-.|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+.+.. +.+
T Consensus 16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~-~~~ 71 (266)
T 4egf_A 16 LRLDGKRALITGATKGIGADIARAFAAAGA-RLVLSGRD----------------------VSELDAARRALGEQF-GTD 71 (266)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHHH-CCC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHHhc-CCc
Confidence 3577889999975 7999999999999997 47777752 224455555665522 235
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 005745 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (679)
Q Consensus 439 v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (679)
+..+..++ ++ .++...-.+.+.+.+...|++|.+..
T Consensus 72 ~~~~~~Dv-------~~--~~~v~~~~~~~~~~~g~id~lv~nAg 107 (266)
T 4egf_A 72 VHTVAIDL-------AE--PDAPAELARRAAEAFGGLDVLVNNAG 107 (266)
T ss_dssp EEEEECCT-------TS--TTHHHHHHHHHHHHHTSCSEEEEECC
T ss_pred EEEEEecC-------CC--HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55565544 10 11111112222333347899888754
No 193
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=94.01 E-value=0.27 Score=48.11 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=27.6
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEe
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLD 395 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD 395 (679)
+++++|+|.|+ |++|..+++.|+..|. ++.++|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~ 36 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNG 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEc
Confidence 56788999975 7999999999999996 566664
No 194
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.99 E-value=0.11 Score=52.89 Aligned_cols=32 Identities=25% Similarity=0.407 Sum_probs=27.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.||.|||+|.+|+.+|++|+..|. +++++|.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCC
Confidence 479999999999999999999994 57777763
No 195
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=93.99 E-value=0.059 Score=53.89 Aligned_cols=31 Identities=26% Similarity=0.418 Sum_probs=27.3
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
||.|||+|.+|+.+++.|+..|..+++++|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r 32 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANR 32 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECC
Confidence 7999999999999999999999656777764
No 196
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.99 E-value=0.063 Score=55.90 Aligned_cols=33 Identities=18% Similarity=0.398 Sum_probs=29.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCc
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~ 398 (679)
.||+|||+|.+|+.+|..|++.|. +++++|.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCh
Confidence 589999999999999999999994 888888753
No 197
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=93.97 E-value=0.27 Score=49.51 Aligned_cols=34 Identities=18% Similarity=0.357 Sum_probs=29.1
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 53 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSR 53 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeC
Confidence 67889999975 7999999999999996 5777765
No 198
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=93.97 E-value=0.23 Score=49.66 Aligned_cols=35 Identities=37% Similarity=0.580 Sum_probs=29.1
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDM 39 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999975 7999999999999996 5777664
No 199
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=93.97 E-value=0.15 Score=53.05 Aligned_cols=31 Identities=29% Similarity=0.270 Sum_probs=28.4
Q ss_pred eEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
||.|+|+|.+|..+|..|+..|. .+++++|.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~ 33 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 79999999999999999999996 48999886
No 200
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=93.97 E-value=0.2 Score=50.53 Aligned_cols=36 Identities=28% Similarity=0.503 Sum_probs=30.8
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 44 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGA-RVVLADLP 44 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 467889999986 8999999999999996 68888763
No 201
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=93.97 E-value=0.27 Score=49.48 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=29.8
Q ss_pred hhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.| .|++|..+++.|+..|. ++.++|.
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r 63 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDI 63 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEc
Confidence 47789999997 57999999999999996 5777775
No 202
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=93.96 E-value=0.2 Score=50.73 Aligned_cols=36 Identities=19% Similarity=0.249 Sum_probs=29.8
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTAT 60 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3577888888875 7999999999999997 6777665
No 203
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=93.95 E-value=0.21 Score=50.61 Aligned_cols=62 Identities=21% Similarity=0.262 Sum_probs=40.3
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcE
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~ 438 (679)
..+++++|+|.|+ ||+|..+|+.|++.|.. +.++|.+ ..+.+.+++.+++... +
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~----------------------~~~~~~~~~~l~~~~~--~ 74 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIA-VYGCARD----------------------AKNVSAAVDGLRAAGH--D 74 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESC----------------------HHHHHHHHHHHHTTTC--C
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCC----------------------HHHHHHHHHHHHhcCC--c
Confidence 4567888999975 79999999999999964 6776652 2355666667766543 4
Q ss_pred EEEEeccc
Q 005745 439 AEGVVMAI 446 (679)
Q Consensus 439 v~~~~~~I 446 (679)
+..+..++
T Consensus 75 ~~~~~~Dv 82 (279)
T 3sju_A 75 VDGSSCDV 82 (279)
T ss_dssp EEEEECCT
T ss_pred EEEEECCC
Confidence 55555444
No 204
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=93.95 E-value=0.32 Score=49.87 Aligned_cols=32 Identities=31% Similarity=0.533 Sum_probs=26.7
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++|+|.|+ |++|..+++.|+..|. +++++|.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEec
Confidence 568999985 9999999999999995 5666664
No 205
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.93 E-value=0.17 Score=53.29 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=29.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.||.|||+|.+|..+|..|+..|...+.|+|-+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 589999999999999999999998559999863
No 206
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=93.92 E-value=0.17 Score=52.86 Aligned_cols=32 Identities=34% Similarity=0.517 Sum_probs=29.2
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
||.|+|+|.+|..+|..|+..|+++|.|+|-+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 69999999999999999999999679999863
No 207
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.89 E-value=0.054 Score=58.88 Aligned_cols=40 Identities=28% Similarity=0.453 Sum_probs=37.1
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCcc
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRV 399 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~V 399 (679)
.++...||+|+|+|+.|..+|+.|+.+|+++|+++|..-+
T Consensus 184 ~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gl 223 (398)
T 2a9f_A 184 KSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGI 223 (398)
T ss_dssp CCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEE
T ss_pred CCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 4788999999999999999999999999999999999753
No 208
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=93.87 E-value=0.24 Score=49.27 Aligned_cols=34 Identities=18% Similarity=0.377 Sum_probs=28.5
Q ss_pred hcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.| .|++|.++++.|+..|. ++.++|.
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r 46 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCAR 46 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5678899986 58999999999999996 6777765
No 209
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=93.86 E-value=0.23 Score=49.46 Aligned_cols=36 Identities=22% Similarity=0.564 Sum_probs=30.1
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 48 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADI 48 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 3577889999975 7999999999999996 6777664
No 210
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.84 E-value=0.12 Score=54.38 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
..||.|||+|..|..+|..|+..|...++++|.+
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3689999999999999999999999569999974
No 211
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=93.83 E-value=0.16 Score=51.70 Aligned_cols=37 Identities=24% Similarity=0.374 Sum_probs=31.0
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
..+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~ 49 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRD 49 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 3467899999975 7999999999999996 68887763
No 212
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=93.82 E-value=0.25 Score=49.11 Aligned_cols=36 Identities=31% Similarity=0.524 Sum_probs=31.1
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 44 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGA-TVILLGR 44 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 4578999999986 7999999999999997 5777775
No 213
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.81 E-value=0.12 Score=57.01 Aligned_cols=91 Identities=21% Similarity=0.257 Sum_probs=63.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEec
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~~ 444 (679)
-||+|+|+|-+|..+|+.|...| ..+++||.|. .+++.+ .+.. ++. .+..
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~-~~v~vId~d~----------------------~~~~~~----~~~~-~~~--~i~G 53 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGEN-NDITIVDKDG----------------------DRLREL----QDKY-DLR--VVNG 53 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTT-EEEEEEESCH----------------------HHHHHH----HHHS-SCE--EEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CCEEEEECCH----------------------HHHHHH----HHhc-CcE--EEEE
Confidence 37999999999999999999888 5689998732 123332 3222 232 2321
Q ss_pred ccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhc-CCe
Q 005745 445 AIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANT-NKI 501 (679)
Q Consensus 445 ~Ipm~gh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~lin~~~~~~-~kp 501 (679)
+. .+.+-+.+. ++++|+++.+|++-+.-.+...+|+.. +.+
T Consensus 54 ------d~----------~~~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~ 96 (461)
T 4g65_A 54 ------HA----------SHPDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTP 96 (461)
T ss_dssp ------CT----------TCHHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHCCS
T ss_pred ------cC----------CCHHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcCCc
Confidence 11 244555554 789999999999999999998888874 444
No 214
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=93.79 E-value=0.12 Score=52.76 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=29.3
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r 40 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGA-KVVVTAR 40 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 467888999976 7999999999999997 4777665
No 215
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=93.77 E-value=0.41 Score=48.66 Aligned_cols=88 Identities=17% Similarity=0.166 Sum_probs=57.7
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.-.... + +.+.+.+++.+.+.. .++.
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----------~----~~~~~~~~~~~~~~~--~~~~ 68 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPK-----------L----PGTIYTAAKEIEEAG--GQAL 68 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSS-----------S----CCCHHHHHHHHHHHT--SEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhh-----------h----hHHHHHHHHHHHhcC--CcEE
Confidence 67889999985 7999999999999997 78888875422111 1 224555566666664 3566
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
.+..++ .+.+.+.+++ ...|++|.+..
T Consensus 69 ~~~~Dv----------------~~~~~v~~~~~~~~~~~g~id~lvnnAg 102 (285)
T 3sc4_A 69 PIVGDI----------------RDGDAVAAAVAKTVEQFGGIDICVNNAS 102 (285)
T ss_dssp EEECCT----------------TSHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 666554 1233333333 47899998754
No 216
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=93.77 E-value=0.22 Score=50.61 Aligned_cols=36 Identities=25% Similarity=0.304 Sum_probs=30.6
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
-.|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 65 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGV 65 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 4578899999975 7999999999999997 6777775
No 217
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=93.76 E-value=0.3 Score=49.20 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=30.2
Q ss_pred HHhhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 359 LDILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 359 q~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
...+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r 53 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASR 53 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3567788999997 57999999999999996 5777765
No 218
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=93.76 E-value=0.16 Score=50.22 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=27.4
Q ss_pred cCCeEEEEc-CChHHHHHHHHHHH-cCCCEEEEEeC
Q 005745 363 SSRKCLLLG-AGTLGCQVARMLMA-WGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~-~GVg~ItlVD~ 396 (679)
++++|+|.| .|++|.++++.|+. .|. ++.++|.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r 37 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTAR 37 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEES
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeC
Confidence 467888886 58999999999999 896 6777765
No 219
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.75 E-value=0.18 Score=52.40 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~D 397 (679)
.||.|||+|.+|..+|..|+..|. ++++++|.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 379999999999999999999984 689999874
No 220
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.74 E-value=0.16 Score=54.36 Aligned_cols=119 Identities=18% Similarity=0.135 Sum_probs=67.2
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhh-CCCcEEE
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI-FPAVAAE 440 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~i-nP~v~v~ 440 (679)
++..+|.|||+|..|..+|++|+..| -+++++|.+.-....+... |-.-+...++.+... .|++-+.
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~dr~~~~~~~l~~~-----------g~~~~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGG-HECVVYDLNVNAVQALERE-----------GIAGARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHTT-----------TCBCCSSHHHHHHHSCSSCEEEE
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHC-----------CCEEeCCHHHHHhcCCCCCEEEE
Confidence 45679999999999999999999999 4788888753222211111 111111122223321 3455555
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChH-HHHHHHHHHHhcCCeEEEEe
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE-SRWLPTLLCANTNKITITAA 506 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e-sR~lin~~~~~~~kp~I~aa 506 (679)
.++.. + .....+.+...++.-++||+++-... .-..+...+...++.++++.
T Consensus 88 ~vp~~-----~---------v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdap 140 (358)
T 4e21_A 88 MVPAA-----V---------VDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVG 140 (358)
T ss_dssp CSCGG-----G---------HHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred eCCHH-----H---------HHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCC
Confidence 54310 0 11112233344556789999876553 22334555677888888763
No 221
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.74 E-value=0.087 Score=54.39 Aligned_cols=31 Identities=26% Similarity=0.492 Sum_probs=27.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+|.|||+|.+|+.+|+.|+..|. +++++|.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~ 61 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNR 61 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeC
Confidence 589999999999999999999997 5788775
No 222
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=93.74 E-value=0.19 Score=50.93 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=28.9
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r 61 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICAR 61 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 67889999985 7999999999999996 5777665
No 223
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.71 E-value=0.079 Score=55.27 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=30.4
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+....||.|||+|.+|..+|++|++.|. +++++|.+
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 63 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRT 63 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 4456799999999999999999999996 68887764
No 224
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.70 E-value=0.17 Score=52.62 Aligned_cols=31 Identities=32% Similarity=0.622 Sum_probs=25.7
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEE
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLL 394 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlV 394 (679)
...||+|||+|.+|+.+|..|++.|. .++++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE
Confidence 45689999999999999999999995 56664
No 225
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=93.68 E-value=0.12 Score=52.28 Aligned_cols=35 Identities=29% Similarity=0.361 Sum_probs=29.0
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r 58 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGT 58 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 477889999976 7999999999999996 5666554
No 226
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=93.67 E-value=0.095 Score=55.73 Aligned_cols=108 Identities=11% Similarity=0.160 Sum_probs=63.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC------CEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHH--hhCCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGV------RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLE--RIFPA 436 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GV------g~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~--~inP~ 436 (679)
.||.|||+|..|+.+|..|++.|. .+++++|.+.- .. ++.|++.+.+.-. ...|+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~--------------~~---~~~~~~~l~~~~~~~~~~~~ 84 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF--------------VN---GERMVDIINNKHENTKYLKG 84 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC--------------------CCHHHHHHHHCBCTTTSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh--------------hh---hHHHHHHHHhcCcccccCCc
Confidence 479999999999999999999993 47888876321 01 3345555443210 00122
Q ss_pred cEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHH----h--cCCeEEEEeeC
Q 005745 437 VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCA----N--TNKITITAALG 508 (679)
Q Consensus 437 v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~----~--~~kp~I~aalG 508 (679)
..+ ... .. ......+.++++|+||.|+-+...+..+..+.. . .+.++|+..-|
T Consensus 85 ~~~---~~~---------------i~-~~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 85 VPL---PHN---------------IV-AHSDLASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp CBC---CTT---------------EE-EESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCS
T ss_pred ccC---cCC---------------eE-EECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCc
Confidence 110 000 00 112234567889999999988777777666643 2 35667775433
No 227
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.67 E-value=0.29 Score=54.22 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=28.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.+|.|||+|..|+.+|.+|+..|. +++++|.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~-~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 479999999999999999999997 58888764
No 228
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=93.67 E-value=0.055 Score=57.87 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=31.0
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.|.+++|.|||+|.+|..+|+.|.+.|+. +..+|.
T Consensus 161 ~l~gktvGIIG~G~IG~~vA~~l~~~G~~-V~~~dr 195 (351)
T 3jtm_A 161 DLEGKTIGTVGAGRIGKLLLQRLKPFGCN-LLYHDR 195 (351)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCE-EEEECS
T ss_pred cccCCEEeEEEeCHHHHHHHHHHHHCCCE-EEEeCC
Confidence 58999999999999999999999999985 666554
No 229
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.57 E-value=0.37 Score=50.20 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=30.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
..+|.|||+|..|..+|+.|++.|.-+++++|.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3689999999999999999999996588888864
No 230
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=93.57 E-value=0.39 Score=48.78 Aligned_cols=91 Identities=13% Similarity=0.089 Sum_probs=54.8
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.. ...+.+.+++.+.+..+ ++
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~---------------------~~~~~~~~~~~~~~~~~--~~ 81 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIG---------------------DAEGVAPVIAELSGLGA--RV 81 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC---------------------CHHHHHHHHHHHHHTTC--CE
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCC---------------------CHHHHHHHHHHHHhcCC--cE
Confidence 467888999975 7999999999999997 56666631 12245556666666543 45
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (679)
..+..++ + +.++...-.+.+.+.+...|+||.+..-
T Consensus 82 ~~~~~Dv-------~--d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 82 IFLRADL-------A--DLSSHQATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp EEEECCT-------T--SGGGHHHHHHHHHHHHSCCCEEEEECC-
T ss_pred EEEEecC-------C--CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 5555544 1 0111111122222233478999987653
No 231
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=93.53 E-value=0.17 Score=51.53 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=27.0
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 65 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGR 65 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4578899999985 7999999999999997 5777765
No 232
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=93.53 E-value=0.29 Score=54.20 Aligned_cols=31 Identities=19% Similarity=0.426 Sum_probs=28.0
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+|.|||+|..|+.+|.+|+..|. +++++|.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~-~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 79999999999999999999997 58888764
No 233
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=93.49 E-value=0.091 Score=55.69 Aligned_cols=36 Identities=22% Similarity=0.406 Sum_probs=31.6
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..|.+++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 160 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~dr 195 (333)
T 3ba1_A 160 TKFSGKRVGIIGLGRIGLAVAERAEAFDC-PISYFSR 195 (333)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECC
Confidence 36889999999999999999999999997 5777765
No 234
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=93.46 E-value=0.22 Score=49.52 Aligned_cols=40 Identities=13% Similarity=0.078 Sum_probs=30.3
Q ss_pred hHHhhcCCeEEEEcC-ChHHHHHHHHHHHcCC--CEEEEEeCC
Q 005745 358 NLDILSSRKCLLLGA-GTLGCQVARMLMAWGV--RKITLLDNG 397 (679)
Q Consensus 358 gq~kL~~~kVlIvGa-GgLGs~VA~~La~~GV--g~ItlVD~D 397 (679)
....+++++|+|.|+ |++|.++|+.|+..|. .++.++|.+
T Consensus 15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESC
T ss_pred cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecC
Confidence 345678889999974 8999999999999995 688888763
No 235
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.45 E-value=0.42 Score=48.69 Aligned_cols=91 Identities=14% Similarity=0.166 Sum_probs=57.1
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~ 443 (679)
++|+|+|+ |.+|..+++.|+..|. +++.++.+. ..|++.+. .+.. +++++ +.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~---------------------~~~~~~~~-~l~~--~~v~~--v~ 64 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPN---------------------SSKTTLLD-EFQS--LGAII--VK 64 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTT---------------------CSCHHHHH-HHHH--TTCEE--EE
T ss_pred CeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCC---------------------CchhhHHH-Hhhc--CCCEE--EE
Confidence 57999996 9999999999999994 566655421 01222111 1222 34544 33
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChH---HHHHHHHHHHhcC
Q 005745 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE---SRWLPTLLCANTN 499 (679)
Q Consensus 444 ~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e---sR~lin~~~~~~~ 499 (679)
.++ .+.+.+.+.++++|+||.+..... .+.++ ++|.+.+
T Consensus 65 ~Dl----------------~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~-~aa~~~g 106 (318)
T 2r6j_A 65 GEL----------------DEHEKLVELMKKVDVVISALAFPQILDQFKIL-EAIKVAG 106 (318)
T ss_dssp CCT----------------TCHHHHHHHHTTCSEEEECCCGGGSTTHHHHH-HHHHHHC
T ss_pred ecC----------------CCHHHHHHHHcCCCEEEECCchhhhHHHHHHH-HHHHhcC
Confidence 332 356778888999999999887432 34444 4555555
No 236
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=93.44 E-value=0.29 Score=48.60 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=29.7
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r 41 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDR 41 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 367889999986 6899999999999996 5778775
No 237
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=93.44 E-value=0.22 Score=49.86 Aligned_cols=34 Identities=32% Similarity=0.282 Sum_probs=26.0
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEE
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITL 393 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~Itl 393 (679)
..+.+++|+|.|+ ||+|..+|+.|++.|..-+.+
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~ 56 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVH 56 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 4567788999975 799999999999999764443
No 238
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=93.42 E-value=0.66 Score=47.17 Aligned_cols=96 Identities=7% Similarity=0.088 Sum_probs=59.4
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCC-cHHHHHHHHHHhhCCCcEEEE
Q 005745 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGD-FKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk-~KAeaaae~L~~inP~v~v~~ 441 (679)
.++|+|.|+ |.+|..+++.|+..| .++++++.+.- +- .. .|++.+. .+.. +++++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~--------------~~---~~~~~~~~l~-~~~~--~~v~~v- 61 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARPLT--------------PD---STPSSVQLRE-EFRS--MGVTII- 61 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECCCC--------------TT---CCHHHHHHHH-HHHH--TTCEEE-
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECCcc--------------cc---cChHHHHHHH-Hhhc--CCcEEE-
Confidence 467999996 999999999999999 46777665310 00 01 1333222 1222 345443
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh---HHHHHHHHHHHhcC
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR---ESRWLPTLLCANTN 499 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~---esR~lin~~~~~~~ 499 (679)
..++ .+.+.+.+.++++|+||.+.... ..+.++ ++|.+.+
T Consensus 62 -~~D~----------------~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~-~aa~~~g 104 (321)
T 3c1o_A 62 -EGEM----------------EEHEKMVSVLKQVDIVISALPFPMISSQIHII-NAIKAAG 104 (321)
T ss_dssp -ECCT----------------TCHHHHHHHHTTCSEEEECCCGGGSGGGHHHH-HHHHHHC
T ss_pred -EecC----------------CCHHHHHHHHcCCCEEEECCCccchhhHHHHH-HHHHHhC
Confidence 3332 35677888999999999998753 234444 4555555
No 239
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=93.42 E-value=0.25 Score=49.31 Aligned_cols=34 Identities=18% Similarity=0.401 Sum_probs=28.2
Q ss_pred hcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 37 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGR 37 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 5678888886 57999999999999995 6777765
No 240
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=93.40 E-value=0.49 Score=47.52 Aligned_cols=95 Identities=21% Similarity=0.155 Sum_probs=59.4
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcE
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~ 438 (679)
..|++++|+|.|+ ||+|..+|+.|++.|.. +.++|.+.-. .+.. +... ...+.+.+++.+.+..+ +
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~-~~~~----~~~~-----~~~~~~~~~~~~~~~~~--~ 75 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGAD-IIAVDLCDQI-ASVP----YPLA-----TPEELAATVKLVEDIGS--R 75 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCC-TTCS----SCCC-----CHHHHHHHHHHHHHHTC--C
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeccccc-cccc----cccc-----chHHHHHHHHHHHhcCC--e
Confidence 4578899999975 79999999999999965 7777764210 0000 0000 23355666666766654 4
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 439 v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
+..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 76 ~~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 76 IVARQADV----------------RDRESLSAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred EEEEeCCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55555544 2334444444 37899999764
No 241
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.39 E-value=0.57 Score=46.75 Aligned_cols=32 Identities=22% Similarity=0.231 Sum_probs=27.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.++|+|.|+|.+|+.+++.|+..|. +++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r 36 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW-RIIGTSR 36 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEES
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEc
Confidence 3689999999999999999999985 5666554
No 242
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.37 E-value=0.17 Score=53.37 Aligned_cols=30 Identities=20% Similarity=0.379 Sum_probs=26.6
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
||.|||+|.+|+.+|..|+..|. +++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~-~V~~~~r 46 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHM 46 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEE-EEEEECS
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 79999999999999999999884 6777765
No 243
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=93.36 E-value=0.32 Score=47.69 Aligned_cols=32 Identities=31% Similarity=0.449 Sum_probs=27.1
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r 34 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDL 34 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 467899975 8999999999999995 6877775
No 244
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.34 E-value=0.55 Score=44.65 Aligned_cols=30 Identities=23% Similarity=0.385 Sum_probs=26.2
Q ss_pred eEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
||+|.|+ |++|..+++.|+..| -++++++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRG-HEVTAIVR 32 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred eEEEEcCCchhHHHHHHHHHhCC-CEEEEEEc
Confidence 7999996 999999999999999 47777765
No 245
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=93.33 E-value=0.23 Score=49.91 Aligned_cols=85 Identities=14% Similarity=0.096 Sum_probs=55.9
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|... - ...+.+.+++.+++. +.++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~----------------~---~~~~~~~~~~~~~~~--~~~~ 65 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQA----------------K---DSDTANKLKDELEDQ--GAKV 65 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCG----------------G---GHHHHHHHHHHHHTT--TCEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCc----------------c---CHHHHHHHHHHHHhc--CCcE
Confidence 467889999975 7999999999999997 466655410 0 223566667777665 3466
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 66 ~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lvnnAg 100 (262)
T 3ksu_A 66 ALYQSDL----------------SNEEEVAKLFDFAEKEFGKVDIAINTVG 100 (262)
T ss_dssp EEEECCC----------------CSHHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred EEEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 6666554 2333333333 36799988765
No 246
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=93.31 E-value=0.31 Score=48.42 Aligned_cols=34 Identities=26% Similarity=0.427 Sum_probs=28.5
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
|++++|+|.|+ ||+|..+++.|++.|. ++.++|.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 36 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGF 36 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999986 8999999999999996 5666654
No 247
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.30 E-value=0.2 Score=52.35 Aligned_cols=31 Identities=32% Similarity=0.520 Sum_probs=28.2
Q ss_pred eEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
||.|||+|.+|+.+|..|+..|. ++++++|.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~ 33 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDV 33 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 79999999999999999999994 57888886
No 248
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=93.27 E-value=0.32 Score=48.66 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=28.2
Q ss_pred cCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 363 SSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+.++|+|.| .|++|.++++.|+..|. ++.++|.+
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~ 36 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLS 36 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecC
Confidence 346899998 68999999999999994 67777754
No 249
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=93.21 E-value=0.37 Score=48.20 Aligned_cols=35 Identities=29% Similarity=0.409 Sum_probs=29.2
Q ss_pred hhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDI 39 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 36788999997 57999999999999996 5777665
No 250
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=93.19 E-value=0.06 Score=59.33 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=33.4
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCC--CEEEEEe
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGV--RKITLLD 395 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GV--g~ItlVD 395 (679)
.+++++|+|+|+||.|..+++.|+..|+ ++|+++|
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 5678999999999999999999999999 9999999
No 251
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.19 E-value=0.43 Score=49.74 Aligned_cols=33 Identities=36% Similarity=0.461 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.||.|||+|.+|..+|..|+..|.-.+.++|-+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 589999999999999999999997459999864
No 252
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=93.19 E-value=0.18 Score=49.45 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=29.3
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ |++|..+++.|+..|. ++.++|.
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r 38 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGR 38 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 467888999975 7999999999999996 5777765
No 253
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=93.18 E-value=0.36 Score=48.83 Aligned_cols=83 Identities=18% Similarity=0.213 Sum_probs=54.1
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.|++++|+|.|+ ||+|..+|+.|++.|.. +.++|.. ...+.+.+++.+++..+ ++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~---------------------~~~~~~~~~~~l~~~~~--~~ 83 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAA-VALTYVN---------------------AAERAQAVVSEIEQAGG--RA 83 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESS---------------------CHHHHHHHHHHHHHTTC--CE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCC---------------------CHHHHHHHHHHHHhcCC--cE
Confidence 478899999985 79999999999999974 5555431 12355666666766543 44
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 84 ~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lvnnAg 118 (271)
T 3v2g_A 84 VAIRADN----------------RDAEAIEQAIRETVEALGGLDILVNSAG 118 (271)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEECCC----------------CCHHHHHHHHHHHHHHcCCCcEEEECCC
Confidence 5555444 2333333333 37899998754
No 254
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.17 E-value=0.3 Score=50.86 Aligned_cols=32 Identities=34% Similarity=0.464 Sum_probs=28.4
Q ss_pred eEEEEcCChHHHHHHHHHHHcCC-CEEEEEeCC
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~D 397 (679)
||.|||+|.+|+.+|..|+..|. .+++++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 79999999999999999999763 579999874
No 255
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=93.16 E-value=0.18 Score=50.16 Aligned_cols=35 Identities=26% Similarity=0.483 Sum_probs=29.2
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
++++++|+|.|+ ||+|.++++.|+..|. ++.++|.
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 38 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDI 38 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467888999975 7999999999999996 5777664
No 256
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=93.15 E-value=0.27 Score=49.12 Aligned_cols=31 Identities=26% Similarity=0.298 Sum_probs=25.8
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHc--CCCEEEEEeC
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAW--GVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~--GVg~ItlVD~ 396 (679)
++|+|.|+ |.+|+.+++.|+.. | -+++.+|.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r 34 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA-SQIIAIVR 34 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG-GGEEEEES
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC-CeEEEEEc
Confidence 47999997 99999999999998 7 45666664
No 257
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=93.15 E-value=0.21 Score=49.65 Aligned_cols=36 Identities=39% Similarity=0.461 Sum_probs=29.8
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 40 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLK 40 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 367889999986 7999999999999996 47777753
No 258
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.14 E-value=0.25 Score=50.91 Aligned_cols=33 Identities=39% Similarity=0.558 Sum_probs=29.2
Q ss_pred CCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
..+|.||| +|.+|+.+|+.|.+.|. +++++|.+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 35899999 99999999999999997 78888764
No 259
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.12 E-value=0.088 Score=56.99 Aligned_cols=37 Identities=27% Similarity=0.310 Sum_probs=33.4
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
-.+...+|+|+|+|.+|..+|+.|.++|. +++++|..
T Consensus 180 ~~v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~ 216 (381)
T 3p2y_A 180 GTVKPASALVLGVGVAGLQALATAKRLGA-KTTGYDVR 216 (381)
T ss_dssp CEECCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred CCcCCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 36789999999999999999999999998 68888863
No 260
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=93.12 E-value=0.39 Score=50.12 Aligned_cols=31 Identities=29% Similarity=0.270 Sum_probs=28.2
Q ss_pred eEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
||.|||+|.+|+.+|..|+..|. ++|.|+|-
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di 33 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 79999999999999999998885 89999884
No 261
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.11 E-value=0.43 Score=48.45 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=27.5
Q ss_pred CeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
++|+|.| .|.+|+.+++.|+..|. +++.++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 35 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRS 35 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 6899999 59999999999999996 67777663
No 262
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=93.10 E-value=0.37 Score=48.88 Aligned_cols=35 Identities=23% Similarity=0.441 Sum_probs=29.6
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r 59 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADV 59 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999975 7999999999999997 6777765
No 263
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=93.10 E-value=0.16 Score=52.22 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=30.6
Q ss_pred HHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEEeeCc
Q 005745 469 TDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAALGF 509 (679)
Q Consensus 469 ~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~aalG~ 509 (679)
+++++++|+|||++ ++++-.-.-..|.++|+++|.+.-|+
T Consensus 67 ~~~l~~~DvVIDft-~p~~~~~~~~~a~~~G~~vVigTtG~ 106 (273)
T 1dih_A 67 DAVKDDFDVFIDFT-RPEGTLNHLAFCRQHGKGMVIGTTGF 106 (273)
T ss_dssp TTTTTSCSEEEECS-CHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred HHHhcCCCEEEEcC-ChHHHHHHHHHHHhCCCCEEEECCCC
Confidence 34556899999999 56666667788999999988764454
No 264
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.09 E-value=0.58 Score=49.12 Aligned_cols=34 Identities=24% Similarity=0.265 Sum_probs=30.7
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+..+|.+++..+|.
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 212 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDI 212 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 4679999999999999999999999988888776
No 265
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.08 E-value=0.26 Score=51.62 Aligned_cols=36 Identities=22% Similarity=0.450 Sum_probs=31.0
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
+.+..||.|||+|.+|..++..|+..|. .+|.|+|-
T Consensus 3 ~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 3 KFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 3456799999999999999999999886 78999886
No 266
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=93.07 E-value=0.48 Score=47.06 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=26.4
Q ss_pred CCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 34 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADY 34 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 46788887 57999999999999996 6777664
No 267
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=93.07 E-value=0.84 Score=47.39 Aligned_cols=36 Identities=25% Similarity=0.336 Sum_probs=29.2
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHH--cCCCEEEEEeCC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMA--WGVRKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~--~GVg~ItlVD~D 397 (679)
.+++++|+|.|+ |++|..+++.|+. .|. +++++|..
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~ 45 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKF 45 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECC
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECC
Confidence 356789999965 9999999999999 774 67777753
No 268
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=93.07 E-value=0.54 Score=49.66 Aligned_cols=97 Identities=12% Similarity=0.100 Sum_probs=58.0
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcE
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~ 438 (679)
.+|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.-.... + ..+.+.+++.+.+.. .+
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~-----------l----~~~l~~~~~~~~~~g--~~ 102 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPK-----------L----LGTIYTAAEEIEAVG--GK 102 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSS-----------S----CCCHHHHHHHHHHTT--CE
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhh-----------h----HHHHHHHHHHHHhcC--Ce
Confidence 4688999999986 7999999999999996 68888864321111 1 112444555666643 45
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 005745 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (679)
Q Consensus 439 v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (679)
+..+..++ + +.++...-.+.+.+.+...|+||.+..
T Consensus 103 ~~~~~~Dv-------~--d~~~v~~~~~~~~~~~g~iDilVnnAG 138 (346)
T 3kvo_A 103 ALPCIVDV-------R--DEQQISAAVEKAIKKFGGIDILVNNAS 138 (346)
T ss_dssp EEEEECCT-------T--CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEEEccC-------C--CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 56665544 1 011111111222222347899998765
No 269
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.04 E-value=0.21 Score=51.41 Aligned_cols=33 Identities=24% Similarity=0.416 Sum_probs=28.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
..||.|||+|.+|..+|++|++.|. +++++|.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 3689999999999999999999996 67887764
No 270
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.03 E-value=0.33 Score=49.05 Aligned_cols=35 Identities=17% Similarity=0.369 Sum_probs=28.9
Q ss_pred hhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.| .||+|.++|+.|+..|. ++.++|.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 38 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGR 38 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 36678888887 57999999999999996 5777765
No 271
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=93.03 E-value=0.26 Score=48.20 Aligned_cols=34 Identities=26% Similarity=0.460 Sum_probs=29.5
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 39 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSR 39 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 57889999987 8999999999999996 5777765
No 272
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=93.01 E-value=0.41 Score=47.00 Aligned_cols=34 Identities=26% Similarity=0.497 Sum_probs=28.9
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r 43 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGA-RLILIDR 43 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999975 8999999999999996 5777765
No 273
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.99 E-value=0.25 Score=51.95 Aligned_cols=31 Identities=29% Similarity=0.555 Sum_probs=28.7
Q ss_pred eEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
||.|+|+|.+|+.+|..|+..|+ .+++++|-
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 33 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDI 33 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 79999999999999999999997 58999887
No 274
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=92.98 E-value=0.26 Score=49.98 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=27.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
..+|.|||+|.+|+.+|+.|...|. .+++++|.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 39 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNR 39 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcC
Confidence 4689999999999999999999974 36777664
No 275
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=92.97 E-value=0.75 Score=46.31 Aligned_cols=36 Identities=19% Similarity=0.307 Sum_probs=30.9
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCc
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGR 398 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~ 398 (679)
+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~ 40 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSA 40 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccc
Confidence 57889999975 7999999999999997 788888753
No 276
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.95 E-value=0.27 Score=52.19 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=31.0
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
...||.|+|+|.+|+.+|..|+..|+ +++.++|-
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di 54 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDV 54 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 46799999999999999999999997 68999886
No 277
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.94 E-value=0.19 Score=50.25 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=30.5
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r 40 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGR 40 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 578899999975 7999999999999997 6888776
No 278
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=92.93 E-value=0.32 Score=48.80 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=29.1
Q ss_pred hhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.| .|++|.++++.|+..|. ++.++|.
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r 66 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYN 66 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 36788899997 57999999999999996 5777775
No 279
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=92.91 E-value=0.3 Score=48.64 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=27.6
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 36 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGF 36 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeC
Confidence 46778888875 7999999999999996 4667654
No 280
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.89 E-value=0.38 Score=53.63 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=29.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+.+|.|||+|..|+.+|++|++.|. +++++|.+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~dr~ 42 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGF-TVCAYNRT 42 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5689999999999999999999996 67888764
No 281
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=92.86 E-value=0.34 Score=48.91 Aligned_cols=36 Identities=36% Similarity=0.481 Sum_probs=29.8
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r 59 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGT 59 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3578889999975 7999999999999996 5677664
No 282
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.85 E-value=0.24 Score=52.57 Aligned_cols=37 Identities=19% Similarity=0.394 Sum_probs=32.0
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
+.....||.|+|+|.+|+.+|..|+..|. .++.|+|-
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di 52 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDV 52 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeC
Confidence 56678899999999999999999999997 58999886
No 283
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=92.84 E-value=0.33 Score=48.38 Aligned_cols=34 Identities=21% Similarity=0.404 Sum_probs=28.6
Q ss_pred hcCCeEEEEcCC-h--HHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGAG-T--LGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGaG-g--LGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|++ + +|..+|+.|++.|. ++.++|.
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r 41 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYA 41 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecC
Confidence 678899999984 3 99999999999997 4667665
No 284
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=92.83 E-value=0.42 Score=48.89 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=29.4
Q ss_pred hhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.| .||+|..+|+.|+..|. ++.++|.
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r 66 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGA-TIVFNDI 66 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 47788999997 57999999999999996 5777665
No 285
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=92.80 E-value=0.28 Score=49.36 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=30.7
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r 62 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGL-GVVIADL 62 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 4678889999976 7999999999999997 5777765
No 286
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=92.80 E-value=0.27 Score=49.97 Aligned_cols=37 Identities=24% Similarity=0.306 Sum_probs=29.5
Q ss_pred HHhhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 359 LDILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 359 q~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
...|++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r 61 (277)
T 3gvc_A 24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADI 61 (277)
T ss_dssp ---CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3467889999997 47999999999999997 6777765
No 287
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=92.79 E-value=0.41 Score=47.42 Aligned_cols=32 Identities=28% Similarity=0.318 Sum_probs=28.0
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
||.|||+|..|..++++|...|+.-..++|.+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~ 33 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVR 33 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecC
Confidence 79999999999999999998887555788875
No 288
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=92.73 E-value=0.5 Score=47.89 Aligned_cols=36 Identities=17% Similarity=0.282 Sum_probs=28.2
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r 55 (288)
T 2x9g_A 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYH 55 (288)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeC
Confidence 4577888999874 7999999999999996 5777665
No 289
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=92.73 E-value=0.64 Score=47.18 Aligned_cols=35 Identities=23% Similarity=0.390 Sum_probs=29.5
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r 57 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGF 57 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999975 7999999999999997 6777665
No 290
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=92.72 E-value=0.57 Score=47.32 Aligned_cols=35 Identities=23% Similarity=0.353 Sum_probs=29.2
Q ss_pred hhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.| .||+|..+|+.|+..|. ++.++|.
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 54 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGL-RVFVCAR 54 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 36788899997 57999999999999996 5777765
No 291
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=92.71 E-value=0.27 Score=47.85 Aligned_cols=36 Identities=22% Similarity=0.517 Sum_probs=31.1
Q ss_pred hcCCeEEEEc-CChHHHHHHHHHHHcCCC-EEEEEeCC
Q 005745 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVR-KITLLDNG 397 (679)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg-~ItlVD~D 397 (679)
+++++|+|.| .|++|.++++.|+..|.. +++++|.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcC
Confidence 5678999999 599999999999999963 88888764
No 292
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=92.71 E-value=0.93 Score=49.62 Aligned_cols=37 Identities=30% Similarity=0.283 Sum_probs=29.7
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcC-C-CEEEEEeCC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWG-V-RKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~G-V-g~ItlVD~D 397 (679)
..+.++|+|.|+ |.+|+++++.|+..+ + .++++++..
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~ 109 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRA 109 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECC
Confidence 356789999996 899999999999983 1 577777763
No 293
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=92.68 E-value=0.32 Score=51.02 Aligned_cols=88 Identities=20% Similarity=0.245 Sum_probs=57.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAW--GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~--GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
..||.|||+|.+|...++.|... |+.-+.++|. ...|++.+++.. ++ ..
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~----------------------~~~~~~~~~~~~-----~~--~~ 63 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI----------------------DPAALKAAVERT-----GA--RG 63 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS----------------------SHHHHHHHHHHH-----CC--EE
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC----------------------CHHHHHHHHHHc-----CC--ce
Confidence 45899999999999999999987 4544456664 223555555432 12 22
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
+ ...+++++ +.|+|+.|+-+.. ..-+...|.+.||+++.
T Consensus 64 ~-----------------------~~~~~ll~~~~~D~V~i~tp~~~-h~~~~~~al~~gk~v~~ 104 (354)
T 3q2i_A 64 H-----------------------ASLTDMLAQTDADIVILTTPSGL-HPTQSIECSEAGFHVMT 104 (354)
T ss_dssp E-----------------------SCHHHHHHHCCCSEEEECSCGGG-HHHHHHHHHHTTCEEEE
T ss_pred e-----------------------CCHHHHhcCCCCCEEEECCCcHH-HHHHHHHHHHCCCCEEE
Confidence 2 23345554 7899999998754 33344566778888775
No 294
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.67 E-value=0.23 Score=51.28 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=27.3
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
||.|||+|.+|+.+|..|++.|. +++++|.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEEc
Confidence 79999999999999999999995 7888776
No 295
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=92.66 E-value=0.32 Score=49.27 Aligned_cols=36 Identities=22% Similarity=0.288 Sum_probs=27.6
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+.+++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (272)
T 4dyv_A 24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGR 60 (272)
T ss_dssp ----CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 3567888888875 7999999999999997 5777775
No 296
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=92.65 E-value=0.69 Score=47.18 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=30.8
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r 79 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYL 79 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5688999999985 7999999999999996 5777665
No 297
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=92.63 E-value=0.49 Score=46.10 Aligned_cols=34 Identities=26% Similarity=0.421 Sum_probs=29.4
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r 39 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTR 39 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 56789999987 8999999999999996 5777764
No 298
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=92.63 E-value=0.38 Score=47.56 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=26.3
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+.+++++|.|+ ||+|.++|+.|++.|.. +.++|.
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~~ 36 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYN-VAVNYA 36 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeC
Confidence 35677888875 79999999999999964 455443
No 299
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.60 E-value=0.47 Score=52.84 Aligned_cols=122 Identities=11% Similarity=0.075 Sum_probs=65.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhh-CCCcEEEEE
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI-FPAVAAEGV 442 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~i-nP~v~v~~~ 442 (679)
..+|.|||+|..|..+|++|++.|. +++++|.+.=....+...-. ... +..-+....+.+..+ .+++-+..+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~g~---~g~---~i~~~~s~~e~v~~l~~aDvVil~V 76 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA---KGT---KVVGAQSLKEMVSKLKKPRRIILLV 76 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT---TTS---SCEECSSHHHHHHTBCSSCEEEECS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhccc---CCC---ceeccCCHHHHHhhccCCCEEEEec
Confidence 3589999999999999999999996 68888865321111111000 000 000011122223322 355555444
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChH--HHHHHHHHHHhcCCeEEEEe
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE--SRWLPTLLCANTNKITITAA 506 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e--sR~lin~~~~~~~kp~I~aa 506 (679)
+.. . ......+.+...++.-++||+++-... ++.+ ...+...++.+++++
T Consensus 77 p~~-----~--------~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~-~~~l~~~Gi~fvd~p 128 (484)
T 4gwg_A 77 KAG-----Q--------AVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRR-CRDLKAKGILFVGSG 128 (484)
T ss_dssp CSS-----H--------HHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHH-HHHHHHTTCEEEEEE
T ss_pred CCh-----H--------HHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHH-HHHHHhhccccccCC
Confidence 310 0 011112334445567799999877653 3433 345566788888763
No 300
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=92.59 E-value=0.44 Score=47.67 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=28.1
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEE
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLL 394 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlV 394 (679)
..|++++|+|.|+ ||+|..+|+.|++.|.. +.++
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~ 38 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGAN-VVLT 38 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEE
Confidence 3578899999975 69999999999999974 5554
No 301
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.57 E-value=0.34 Score=50.86 Aligned_cols=33 Identities=24% Similarity=0.509 Sum_probs=28.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
..||.|+|+|.+|..++..|+..|. .+|.|+|-
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 3689999999999999999999884 67888885
No 302
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=92.55 E-value=0.79 Score=46.12 Aligned_cols=37 Identities=24% Similarity=0.318 Sum_probs=31.6
Q ss_pred HhhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
..+++++|+|.| .||+|..+|+.|++.|. ++.++|.+
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 43 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC 43 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence 357889999997 57999999999999996 58888874
No 303
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=92.55 E-value=0.17 Score=52.53 Aligned_cols=37 Identities=14% Similarity=0.214 Sum_probs=31.5
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+.+++++|+|.|+ |.+|+.+++.|+..|. +++++|.+
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 4577889999995 9999999999999995 78877763
No 304
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=92.53 E-value=0.43 Score=48.10 Aligned_cols=35 Identities=14% Similarity=0.409 Sum_probs=29.4
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
++++++|+|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 41 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDK 41 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 367889999975 7999999999999996 5777765
No 305
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=92.53 E-value=0.48 Score=48.64 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=27.5
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+++|+|.|+ |.+|+.+++.|+..|. +++++|..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 35 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNF 35 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence 368999985 9999999999999994 67777763
No 306
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.51 E-value=0.36 Score=53.12 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCc
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~ 398 (679)
.||.|||+|.+|..+|..|+..|. +++++|.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCH
Confidence 589999999999999999999995 788988753
No 307
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.50 E-value=0.43 Score=51.14 Aligned_cols=34 Identities=24% Similarity=0.468 Sum_probs=30.6
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+...|.++++.+|.
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 246 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEP 246 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 4678999999999999999999999989988775
No 308
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=92.50 E-value=0.82 Score=46.21 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=30.1
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
-.|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 63 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGR 63 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcC
Confidence 3578899999975 7999999999999997 5777663
No 309
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=92.48 E-value=0.22 Score=50.11 Aligned_cols=35 Identities=23% Similarity=0.370 Sum_probs=29.4
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
++++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r 38 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDR 38 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 367889999975 7999999999999996 6777765
No 310
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=92.47 E-value=0.27 Score=50.47 Aligned_cols=90 Identities=13% Similarity=0.121 Sum_probs=56.9
Q ss_pred hcCCeEEEEcCChHHHH-HHHHHHHc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 362 LSSRKCLLLGAGTLGCQ-VARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~-VA~~La~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
++..||.|||+|.+|.. .++.|... |+.-+.++|. ...|++.+++... +.
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~----------------------~~~~~~~~a~~~~-----~~- 55 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP----------------------NKVKREKICSDYR-----IM- 55 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS----------------------CHHHHHHHHHHHT-----CC-
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC----------------------CHHHHHHHHHHcC-----CC-
Confidence 34579999999999996 88888764 4433335554 2335555544321 10
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
...+.++++++.|+|+.|+-+..-.- +...|.+.||+++.
T Consensus 56 ------------------------~~~~~~~ll~~~D~V~i~tp~~~h~~-~~~~al~~gk~vl~ 95 (308)
T 3uuw_A 56 ------------------------PFDSIESLAKKCDCIFLHSSTETHYE-IIKILLNLGVHVYV 95 (308)
T ss_dssp ------------------------BCSCHHHHHTTCSEEEECCCGGGHHH-HHHHHHHTTCEEEE
T ss_pred ------------------------CcCCHHHHHhcCCEEEEeCCcHhHHH-HHHHHHHCCCcEEE
Confidence 02344566668999999988765433 34456778888774
No 311
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=92.46 E-value=0.65 Score=45.80 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=29.1
Q ss_pred hhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.| .|++|.++++.|+..|. ++.++|.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 46788899997 58999999999999996 5777665
No 312
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.45 E-value=0.12 Score=48.35 Aligned_cols=32 Identities=28% Similarity=0.462 Sum_probs=28.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
..|+|||+|-.|..+|..|++.|+ +++|+|..
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 469999999999999999999998 68888864
No 313
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=92.42 E-value=0.3 Score=48.71 Aligned_cols=36 Identities=31% Similarity=0.459 Sum_probs=29.8
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.+++++|+|.|+ ||+|.++++.|++.|. ++.++|.+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 45 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLD 45 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 367889999975 6999999999999996 67777753
No 314
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.42 E-value=0.098 Score=53.11 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=26.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEe
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLD 395 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD 395 (679)
.||.|||+|.+|+.+|+.|+..|. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH-QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC-EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-EEEEEc
Confidence 489999999999999999999996 677776
No 315
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=92.41 E-value=0.12 Score=56.01 Aligned_cols=112 Identities=16% Similarity=0.232 Sum_probs=68.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCC-------EEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCc
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVR-------KITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAV 437 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg-------~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v 437 (679)
.||.|||+|+=|+.+|..|+..|-+ .+++.-.+ +++. ++. .++.+++...+.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~---------------~e~~--~~~----~~e~in~~~~N~ 93 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFE---------------EEIN--GEK----LTEIINTRHQNV 93 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCC---------------CBSS--SCB----HHHHHTTTCCBT
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcc---------------hHhh--hHH----HHHHHHhcCcCc
Confidence 4899999999999999999998742 35554322 1210 111 122222211000
Q ss_pred EEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHH--hcCCeEEEEeeCcc
Q 005745 438 AAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCA--NTNKITITAALGFD 510 (679)
Q Consensus 438 ~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~--~~~kp~I~aalG~~ 510 (679)
+ | .||..+++ +. .-..++.+.++++|+||.++-+...|+.+.++.. ..++++|+++-|++
T Consensus 94 ~---Y-----Lpgv~Lp~----~i-~~t~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 94 K---Y-----LPGITLPD----NL-VANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp T---T-----BTTCCCCS----SE-EEESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred c---c-----CCCCcCCC----Cc-EEeCCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccc
Confidence 0 0 12222221 00 1234667888999999999999999999988864 34678898876764
No 316
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=92.41 E-value=0.16 Score=53.66 Aligned_cols=38 Identities=21% Similarity=0.427 Sum_probs=33.7
Q ss_pred hhcCCeEEEEcCCh-HHHHHHHHHHHcCCCEEEEEeCCcc
Q 005745 361 ILSSRKCLLLGAGT-LGCQVARMLMAWGVRKITLLDNGRV 399 (679)
Q Consensus 361 kL~~~kVlIvGaGg-LGs~VA~~La~~GVg~ItlVD~D~V 399 (679)
.+.+++|+|||+|. +|..+|+.|++.| .+++++|.+.+
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~g-AtVtv~nR~~~ 212 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDG-ATVYSVDVNNI 212 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTS-CEEEEECSSEE
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCC-CEEEEEeCchH
Confidence 58999999999996 5999999999999 56999988655
No 317
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.39 E-value=0.23 Score=48.30 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=29.3
Q ss_pred cCCeEEEEcC-ChHHHHHHHHHHHcCC-CEEEEEeCC
Q 005745 363 SSRKCLLLGA-GTLGCQVARMLMAWGV-RKITLLDNG 397 (679)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GV-g~ItlVD~D 397 (679)
++++|+|.|+ |++|.++++.|+..|. .++.++|.+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC
Confidence 4678888875 7999999999999995 688888864
No 318
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=92.38 E-value=0.59 Score=46.06 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=27.3
Q ss_pred cCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r 35 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGR 35 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4578999985 7999999999999996 5777765
No 319
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.37 E-value=0.44 Score=48.87 Aligned_cols=34 Identities=18% Similarity=0.407 Sum_probs=28.5
Q ss_pred hcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.| .||+|.++|+.|++.|. ++.++|.
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r 58 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGR 58 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 6778888886 57999999999999996 5777765
No 320
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=92.36 E-value=0.36 Score=48.47 Aligned_cols=35 Identities=23% Similarity=0.467 Sum_probs=29.2
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.+++.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r 61 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYR 61 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999985 7999999999999997 4666554
No 321
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=92.34 E-value=0.4 Score=48.53 Aligned_cols=35 Identities=14% Similarity=0.378 Sum_probs=30.1
Q ss_pred hhcCCeEEEEcC---ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa---GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r 55 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYA 55 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeC
Confidence 477899999998 5999999999999995 5777775
No 322
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=92.34 E-value=0.44 Score=47.30 Aligned_cols=35 Identities=26% Similarity=0.367 Sum_probs=28.7
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r 41 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGA-KVIGTAT 41 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 367888999975 7999999999999996 4666664
No 323
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=92.33 E-value=0.55 Score=49.10 Aligned_cols=33 Identities=30% Similarity=0.472 Sum_probs=29.5
Q ss_pred eEEEEcC-ChHHHHHHHHHHHcCC-CEEEEEeCCc
Q 005745 366 KCLLLGA-GTLGCQVARMLMAWGV-RKITLLDNGR 398 (679)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~GV-g~ItlVD~D~ 398 (679)
||+|+|+ |.+|..++..|+..|. .+|.++|-+.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 7999998 9999999999998885 7899999864
No 324
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=92.31 E-value=0.35 Score=48.28 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=29.9
Q ss_pred hcCCeEEEEcC---ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 362 LSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 362 L~~~kVlIvGa---GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~ 44 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQN 44 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCc
Confidence 67789999998 6999999999999996 57777753
No 325
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=92.26 E-value=0.58 Score=47.84 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=30.5
Q ss_pred hhcCCeEEEEcCC---hHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGAG---TLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGaG---gLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|++ |+|..+|+.|++.|.. +.++|.
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~-V~~~~r 64 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAE-VALTYL 64 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEES
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCE-EEEEeC
Confidence 4678999999986 8999999999999975 777775
No 326
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=92.24 E-value=0.64 Score=46.21 Aligned_cols=36 Identities=19% Similarity=0.359 Sum_probs=29.9
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.+++++|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 39 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLR 39 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 367788999975 7999999999999996 67777753
No 327
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=92.24 E-value=0.57 Score=45.67 Aligned_cols=28 Identities=21% Similarity=0.272 Sum_probs=22.6
Q ss_pred CCeEEEEc-CChHHHHHHHHHHHcCCCEE
Q 005745 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKI 391 (679)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~I 391 (679)
+++|+|.| .|++|.++++.|+..|..-+
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~ 29 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVL 29 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEE
Confidence 35788886 57999999999999996533
No 328
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=92.22 E-value=0.85 Score=46.55 Aligned_cols=32 Identities=38% Similarity=0.552 Sum_probs=27.5
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.+|+|.|+ |.+|+.+++.|+..| -+++++|.+
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 46 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHRP 46 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecC
Confidence 37999995 999999999999999 478887763
No 329
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=92.21 E-value=1 Score=44.99 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=25.0
Q ss_pred eEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+|+|.|+ |.+|..+++.|...+-.+++.++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R 33 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVR 33 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEES
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEEC
Confidence 6999996 999999999999983345666655
No 330
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=92.18 E-value=0.35 Score=47.74 Aligned_cols=34 Identities=15% Similarity=0.361 Sum_probs=29.1
Q ss_pred hcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|.| .|++|.++++.|+..|. ++.++|.
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 46 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYR 46 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeC
Confidence 5678899997 57999999999999996 7888775
No 331
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.18 E-value=0.4 Score=50.57 Aligned_cols=34 Identities=26% Similarity=0.558 Sum_probs=29.3
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~ 396 (679)
+..||.|+|+|.+|..++..|+..|. .+|.|+|-
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 34689999999999999999998884 57888875
No 332
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=92.18 E-value=0.46 Score=48.39 Aligned_cols=88 Identities=16% Similarity=0.153 Sum_probs=56.8
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.|+++.++|-|+ +|+|-.+|+.|++.|. ++.++|. ...+.+.+++.|++.. .++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~----------------------~~~~~~~~~~~i~~~g--~~~ 58 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVEL----------------------LEDRLNQIVQELRGMG--KEV 58 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES----------------------CHHHHHHHHHHHHHTT--CCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEEC----------------------CHHHHHHHHHHHHhcC--CcE
Confidence 478999999975 6999999999999996 5777775 2335666777777654 345
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLT 482 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~t 482 (679)
..+..++ + +.++.+.-.+...+-+...|++|+..
T Consensus 59 ~~~~~Dv-------t--~~~~v~~~~~~~~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 59 LGVKADV-------S--KKKDVEEFVRRTFETYSRIDVLCNNA 92 (254)
T ss_dssp EEEECCT-------T--SHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEccC-------C--CHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 5555544 1 11112222233334445678888754
No 333
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=92.17 E-value=0.31 Score=48.79 Aligned_cols=60 Identities=15% Similarity=0.142 Sum_probs=39.4
Q ss_pred cCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
++++|+|.|+ ||+|..+|+.|++.|..-+.+.+. ...+.+.+++.+.+..+ ++..
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r----------------------~~~~~~~~~~~~~~~~~--~~~~ 58 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYAR----------------------SKKAALETAEEIEKLGV--KVLV 58 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS----------------------CHHHHHHHHHHHHTTTC--CEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCC----------------------CHHHHHHHHHHHHhcCC--cEEE
Confidence 4677888875 799999999999999754433232 22355666666766543 4555
Q ss_pred Eeccc
Q 005745 442 VVMAI 446 (679)
Q Consensus 442 ~~~~I 446 (679)
+..++
T Consensus 59 ~~~Dv 63 (258)
T 3oid_A 59 VKANV 63 (258)
T ss_dssp EECCT
T ss_pred EEcCC
Confidence 55444
No 334
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=92.16 E-value=0.43 Score=47.59 Aligned_cols=35 Identities=31% Similarity=0.463 Sum_probs=29.7
Q ss_pred hhcCCeEEEEcC---ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa---GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r 42 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQ 42 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEES
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcC
Confidence 356789999998 6999999999999996 5777765
No 335
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=92.14 E-value=0.38 Score=48.73 Aligned_cols=35 Identities=23% Similarity=0.306 Sum_probs=26.6
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..++ ++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r 53 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGW-SLVLTGR 53 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEES
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4566 77888875 6999999999999996 5777765
No 336
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=92.12 E-value=0.81 Score=47.29 Aligned_cols=95 Identities=18% Similarity=0.112 Sum_probs=58.1
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcE
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~ 438 (679)
..|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.-. .++.. .. ....+.+.+++.+.+.. .+
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~-~~~~~----~~-----~~~~~~~~~~~~~~~~~--~~ 108 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQ-PNLDY----AQ-----GSPEELKETVRLVEEQG--RR 108 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCC-TTCCS----CC-----CCHHHHHHHHHHHHHTT--CC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEeccccc-ccccc----cc-----cCHHHHHHHHHHHHhcC--Ce
Confidence 4678889999975 7999999999999996 67777764311 11111 00 01234555566666554 44
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 005745 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (679)
Q Consensus 439 v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (679)
+..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 109 ~~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lVnnAg 144 (317)
T 3oec_A 109 IIARQADV----------------RDLASLQAVVDEALAEFGHIDILVSNVG 144 (317)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55565544 2333333333 47899998764
No 337
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=92.11 E-value=0.47 Score=47.83 Aligned_cols=35 Identities=29% Similarity=0.355 Sum_probs=28.1
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ ||+|.++|+.|+..|.. +.++|.
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~-V~~~~~ 60 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAK-VAVNYA 60 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 467888999976 79999999999999964 555443
No 338
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=92.10 E-value=0.41 Score=53.51 Aligned_cols=28 Identities=18% Similarity=0.205 Sum_probs=26.6
Q ss_pred HHhhcC-CeEEEEcCChHHHHHHHHHHHc
Q 005745 359 LDILSS-RKCLLLGAGTLGCQVARMLMAW 386 (679)
Q Consensus 359 q~kL~~-~kVlIvGaGgLGs~VA~~La~~ 386 (679)
.+.|++ ++|.|||+|..|..+|++|..+
T Consensus 48 ~~~L~GiKkIgIIGlGsMG~AmA~nLr~s 76 (525)
T 3fr7_A 48 PEAFKGIKQIGVIGWGSQGPAQAQNLRDS 76 (525)
T ss_dssp HHHTTTCSEEEEECCTTHHHHHHHHHHHH
T ss_pred hHHhcCCCEEEEEeEhHHHHHHHHHHHhc
Confidence 578999 9999999999999999999999
No 339
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=92.06 E-value=0.93 Score=46.32 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=57.5
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcE
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~ 438 (679)
..|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.-. ....+. .....+.+.+++.+.+.. .+
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~----~~~~~~------~~~~~~~~~~~~~~~~~~--~~ 90 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQL----DGVKLP------MSTPDDLAETVRQVEALG--RR 90 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCC----TTCCSC------CCCHHHHHHHHHHHHHTT--CC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeccccc----cccccc------ccCHHHHHHHHHHHHhcC--Cc
Confidence 3578899999985 7999999999999996 56677764210 000010 002335556666666654 35
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHh-------hccCCEEEEeCC
Q 005745 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDL-------ILSHDVIFLLTD 483 (679)
Q Consensus 439 v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~l-------i~~~DvV~~~tD 483 (679)
+..+..++ .+.+.+.++ +...|++|.+..
T Consensus 91 ~~~~~~Dv----------------~~~~~v~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 91 IIASQVDV----------------RDFDAMQAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred eEEEECCC----------------CCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 55565554 223333333 347899998654
No 340
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=92.03 E-value=0.12 Score=52.10 Aligned_cols=34 Identities=32% Similarity=0.418 Sum_probs=30.8
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++ +|+|||+|+.|..+++.|...|+ +++++|.
T Consensus 114 ~l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r 147 (263)
T 2d5c_A 114 PLKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNR 147 (263)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 3678 99999999999999999999998 8998875
No 341
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=92.02 E-value=0.36 Score=50.26 Aligned_cols=88 Identities=11% Similarity=0.090 Sum_probs=62.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~ 443 (679)
..+|+|+|+|-+|..+++.|...|. ++++|.|. .+++ +.+ .++.+ +.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~----------------------~~~~-~~~------~~~~~--i~ 161 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDEN----------------------VRKK-VLR------SGANF--VH 161 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGG----------------------GHHH-HHH------TTCEE--EE
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCCh----------------------hhhh-HHh------CCcEE--EE
Confidence 5689999999999999999999887 88887632 1333 221 23332 33
Q ss_pred cccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhcCC
Q 005745 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTNK 500 (679)
Q Consensus 444 ~~Ipm~gh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~lin~~~~~~~k 500 (679)
.+. .+.+.+.+. ++++|.|+.++++.+.-.++...++..+.
T Consensus 162 gd~----------------~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~ 203 (336)
T 1lnq_A 162 GDP----------------TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 203 (336)
T ss_dssp SCT----------------TSHHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTTCT
T ss_pred eCC----------------CCHHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHHCC
Confidence 211 245556555 78999999999998888888888888765
No 342
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.00 E-value=0.63 Score=48.81 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=30.5
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 204 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDL 204 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 4679999999999999999998999989988875
No 343
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=91.99 E-value=1.2 Score=45.42 Aligned_cols=31 Identities=32% Similarity=0.643 Sum_probs=26.4
Q ss_pred CeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 365 RKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
++|+|.| .|.+|+.+++.|+..|. +++++|.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeC
Confidence 4799998 59999999999999994 6777765
No 344
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=91.97 E-value=0.48 Score=49.84 Aligned_cols=90 Identities=9% Similarity=-0.021 Sum_probs=56.9
Q ss_pred hcCCeEEEEcCChHHH-HHHHHHHHc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 362 LSSRKCLLLGAGTLGC-QVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs-~VA~~La~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.+..||+|||+|.+|. ..++.|... |+.-..++|.+ ..|++.+++.. ++.
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~----------------------~~~~~~~a~~~-----g~~- 76 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRR----------------------WDRAKRFTERF-----GGE- 76 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESS----------------------HHHHHHHHHHH-----CSE-
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCC----------------------HHHHHHHHHHc-----CCC-
Confidence 4457899999999998 789999887 44444466652 22455444433 121
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
.+ ...+++++ +.|+|+.|+-+.. ..-+...|.+.||+++.
T Consensus 77 -~~-----------------------~~~~~ll~~~~~D~V~i~tp~~~-h~~~~~~al~aGk~Vl~ 118 (350)
T 3rc1_A 77 -PV-----------------------EGYPALLERDDVDAVYVPLPAVL-HAEWIDRALRAGKHVLA 118 (350)
T ss_dssp -EE-----------------------ESHHHHHTCTTCSEEEECCCGGG-HHHHHHHHHHTTCEEEE
T ss_pred -Cc-----------------------CCHHHHhcCCCCCEEEECCCcHH-HHHHHHHHHHCCCcEEE
Confidence 11 23345554 5899999887654 34445567788887764
No 345
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=91.95 E-value=0.39 Score=50.11 Aligned_cols=87 Identities=16% Similarity=0.069 Sum_probs=55.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005745 365 RKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~ 443 (679)
.||.|||+|.+|...++.|... |+.-+.++|. ...|++.+++. +. + ..+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~----------------------~~~~~~~~a~~----~g-~--~~~- 54 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADP----------------------FIEGAQRLAEA----NG-A--EAV- 54 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS----------------------SHHHHHHHHHT----TT-C--EEE-
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC----------------------CHHHHHHHHHH----cC-C--cee-
Confidence 5899999999999999999986 4333335554 22244433332 21 2 222
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 444 ~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
...+++++ +.|+|+.|+-+... .-+...|.+.||.++.
T Consensus 55 ----------------------~~~~~~l~~~~~D~V~i~tp~~~h-~~~~~~al~~gk~v~~ 94 (344)
T 3euw_A 55 ----------------------ASPDEVFARDDIDGIVIGSPTSTH-VDLITRAVERGIPALC 94 (344)
T ss_dssp ----------------------SSHHHHTTCSCCCEEEECSCGGGH-HHHHHHHHHTTCCEEE
T ss_pred ----------------------CCHHHHhcCCCCCEEEEeCCchhh-HHHHHHHHHcCCcEEE
Confidence 23456666 78999999976543 3445567778887764
No 346
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=91.95 E-value=0.7 Score=46.57 Aligned_cols=77 Identities=22% Similarity=0.258 Sum_probs=50.9
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
.++|+|.|+ |.+|..+++.|+..|--+++.++.+. .+.++ +.+.. +++++ +
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~--------------------~~~~~----~~l~~--~~~~~--~ 56 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNP--------------------RKKAA----KELRL--QGAEV--V 56 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCT--------------------TSHHH----HHHHH--TTCEE--E
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCC--------------------CCHHH----HHHHH--CCCEE--E
Confidence 468999998 99999999999998844677766521 11111 12222 34443 3
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCC
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (679)
..++ .+.+.+.+.+++.|+||.+...
T Consensus 57 ~~D~----------------~d~~~l~~~~~~~d~vi~~a~~ 82 (299)
T 2wm3_A 57 QGDQ----------------DDQVIMELALNGAYATFIVTNY 82 (299)
T ss_dssp ECCT----------------TCHHHHHHHHTTCSEEEECCCH
T ss_pred EecC----------------CCHHHHHHHHhcCCEEEEeCCC
Confidence 3332 3567778888999999998763
No 347
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=91.92 E-value=0.73 Score=45.78 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=26.3
Q ss_pred CCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++|+|.| .||+|..+++.|++.|. ++.++|.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 34 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADL 34 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEEC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788887 57999999999999996 4777665
No 348
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=91.91 E-value=0.27 Score=52.66 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=27.2
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
....++|+|.|+ |++|.++++.|+..|. ++++++.
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R 101 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIR 101 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEE-EEEEEEE
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCC-EEEEEEC
Confidence 344568999996 9999999999987774 5666554
No 349
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=91.90 E-value=0.34 Score=48.98 Aligned_cols=38 Identities=18% Similarity=0.396 Sum_probs=31.5
Q ss_pred HHhhcCCeEEEEcC---ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 359 LDILSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 359 q~kL~~~kVlIvGa---GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
...+++++|+|.|+ +|+|.++|+.|++.|. ++.++|.+
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~ 61 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVG 61 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECT
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCc
Confidence 45688999999996 3599999999999996 68888764
No 350
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=91.90 E-value=0.26 Score=47.85 Aligned_cols=34 Identities=21% Similarity=0.088 Sum_probs=27.8
Q ss_pred cCCeEEEEc-CChHHHHHHHHHHHcC-CCEEEEEeC
Q 005745 363 SSRKCLLLG-AGTLGCQVARMLMAWG-VRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~G-Vg~ItlVD~ 396 (679)
..++|+|.| .|++|.++++.|+..| --++++++.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 467899998 5999999999999995 346777665
No 351
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=91.90 E-value=0.52 Score=46.38 Aligned_cols=32 Identities=25% Similarity=0.395 Sum_probs=26.3
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEE
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLL 394 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlV 394 (679)
+++++|+|.|+ ||+|.++|+.|+..|.. +.++
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~ 37 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGAL-VAIH 37 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEE
Confidence 57788999986 79999999999999974 4443
No 352
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.88 E-value=0.66 Score=47.43 Aligned_cols=36 Identities=17% Similarity=0.379 Sum_probs=30.0
Q ss_pred HhhcCCeEEEEcCC-h--HHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAG-T--LGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaG-g--LGs~VA~~La~~GVg~ItlVD~ 396 (679)
..|++++|+|.|++ + +|..+|+.|++.|.. +.++|.
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~-V~~~~r 65 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAE-LAFTYQ 65 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCE-EEEEEC
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEEcC
Confidence 35788999999984 4 999999999999964 777765
No 353
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=91.84 E-value=0.1 Score=53.57 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=30.6
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++|+|+|+||+|..+|+.|+..| +++++|.
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r 158 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANR 158 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC--CEEEEEC
Confidence 67889999999999999999999999 9999765
No 354
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=91.84 E-value=1.2 Score=46.86 Aligned_cols=34 Identities=26% Similarity=0.258 Sum_probs=29.2
Q ss_pred cCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+.++|+|.|+ |.+|..+++.|+..|. +++++|.+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWK 62 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECC
Confidence 4578999998 9999999999999994 78887764
No 355
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=91.81 E-value=0.37 Score=47.83 Aligned_cols=37 Identities=16% Similarity=0.310 Sum_probs=32.0
Q ss_pred HHhhcCCeEEEEcC---ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 359 LDILSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 359 q~kL~~~kVlIvGa---GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
...+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r 48 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYV 48 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEec
Confidence 35688999999997 5999999999999997 6777775
No 356
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=91.78 E-value=0.51 Score=49.30 Aligned_cols=89 Identities=13% Similarity=0.171 Sum_probs=55.1
Q ss_pred CeEEEEcCChHHHHHHHHHH-Hc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 365 RKCLLLGAGTLGCQVARMLM-AW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La-~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
.||.|||+|.+|...++.|. .. |+.-+.++|. ...|++.+++. +. +.+..+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~----------------------~~~~~~~~~~~----~g-~~~~~~ 55 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV----------------------NQEAAQKVVEQ----YQ-LNATVY 55 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS----------------------SHHHHHHHHHH----TT-CCCEEE
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC----------------------CHHHHHHHHHH----hC-CCCeee
Confidence 48999999999999999998 43 4433335553 22344444433 21 111122
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhcc--CCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILS--HDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~--~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
...++++++ .|+|+.|+-+. ...-+...|.+.||+++.
T Consensus 56 -----------------------~~~~~ll~~~~~D~V~i~tp~~-~h~~~~~~al~~Gk~vl~ 95 (344)
T 3mz0_A 56 -----------------------PNDDSLLADENVDAVLVTSWGP-AHESSVLKAIKAQKYVFC 95 (344)
T ss_dssp -----------------------SSHHHHHHCTTCCEEEECSCGG-GHHHHHHHHHHTTCEEEE
T ss_pred -----------------------CCHHHHhcCCCCCEEEECCCch-hHHHHHHHHHHCCCcEEE
Confidence 234556654 89999999654 444455667888888775
No 357
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=91.76 E-value=0.079 Score=56.22 Aligned_cols=92 Identities=23% Similarity=0.280 Sum_probs=61.4
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
..|.+++|.|||.|.+|..+|+.+...|+.-+ .+|. +..++. .+. ++
T Consensus 137 ~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~-~~d~-------------~~~~~~---------------~~~--~~-- 183 (334)
T 3kb6_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGMKVL-CYDV-------------VKREDL---------------KEK--GC-- 183 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECS-------------SCCHHH---------------HHT--TC--
T ss_pred ceecCcEEEEECcchHHHHHHHhhcccCceee-ecCC-------------ccchhh---------------hhc--Cc--
Confidence 57899999999999999999999999997644 4443 001111 110 11
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC-ChHHHHHHHHHHHh---cCCeEEEEeeC
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD-TRESRWLPTLLCAN---TNKITITAALG 508 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD-s~esR~lin~~~~~---~~kp~I~aalG 508 (679)
....++++++++|+|+.++- +.++|.+++.-..+ .+..+||.+-|
T Consensus 184 ------------------------~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG 232 (334)
T 3kb6_A 184 ------------------------VYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARG 232 (334)
T ss_dssp ------------------------EECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred ------------------------eecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCcc
Confidence 11245688999999988654 66788877764443 34457777543
No 358
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=91.76 E-value=0.5 Score=49.59 Aligned_cols=38 Identities=24% Similarity=0.557 Sum_probs=31.8
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
..++.++|+|.|+ |.+|..+++.|+..|.-+++++|..
T Consensus 28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECC
Confidence 3567789999996 9999999999999995578877753
No 359
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=91.75 E-value=1.7 Score=45.37 Aligned_cols=32 Identities=22% Similarity=0.443 Sum_probs=27.3
Q ss_pred CeEEEEcC-ChHHHHHHHHHH-HcCCCEEEEEeCC
Q 005745 365 RKCLLLGA-GTLGCQVARMLM-AWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La-~~GVg~ItlVD~D 397 (679)
.+|+|.|+ |.+|..+++.|+ ..|. +++++|..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~-~V~~~~r~ 36 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSL 36 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCC-EEEEEecC
Confidence 47999985 999999999999 9994 77777763
No 360
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=91.68 E-value=0.64 Score=49.66 Aligned_cols=30 Identities=20% Similarity=0.308 Sum_probs=26.1
Q ss_pred CeEEEEcCChHHHHHHHHHHH-cCCCEEEEEe
Q 005745 365 RKCLLLGAGTLGCQVARMLMA-WGVRKITLLD 395 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~-~GVg~ItlVD 395 (679)
.||+|||+|.+|+.+|..|+. .|. +++++|
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~-~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGV-EVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTE-EEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCC-EEEEEe
Confidence 379999999999999999988 474 688877
No 361
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=91.65 E-value=0.7 Score=47.88 Aligned_cols=32 Identities=28% Similarity=0.368 Sum_probs=25.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHc-CCCEEEEEeC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~-GVg~ItlVD~ 396 (679)
.||.|||+|.+|...++.|... |+.-+.++|.
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~ 36 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADA 36 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC
Confidence 4899999999999999999986 4433445554
No 362
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=91.65 E-value=0.39 Score=47.66 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=29.0
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r 53 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYG 53 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 467889999975 7999999999999996 5666664
No 363
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=91.63 E-value=0.52 Score=48.54 Aligned_cols=100 Identities=17% Similarity=0.137 Sum_probs=61.5
Q ss_pred cCCeEEEEc-CChHHHHHHHHHHHc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 363 SSRKCLLLG-AGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
+..||+|+| +|..|..+++.+... ++.=..++|...- + +.-.|+ |. . ..+.+++
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~------~---~~G~d~---ge----l-----~g~~~gv--- 61 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGS------P---QLGQDA---GA----F-----LGKQTGV--- 61 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTC------T---TTTSBT---TT----T-----TTCCCSC---
T ss_pred cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCc------c---cccccH---HH----H-----hCCCCCc---
Confidence 346899999 899999999999875 3333333454210 0 011233 21 0 0111111
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEEeeCc
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAALGF 509 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~aalG~ 509 (679)
+ -.++++++++++|+|||+|. ++.-.-.-..|.++++++|.+..|+
T Consensus 62 -----------~-----------v~~dl~~ll~~~DVVIDfT~-p~a~~~~~~~al~~G~~vVigTTG~ 107 (272)
T 4f3y_A 62 -----------A-----------LTDDIERVCAEADYLIDFTL-PEGTLVHLDAALRHDVKLVIGTTGF 107 (272)
T ss_dssp -----------B-----------CBCCHHHHHHHCSEEEECSC-HHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred -----------e-----------ecCCHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEEECCCC
Confidence 1 12355667778999999995 5555556678899999999876665
No 364
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=91.62 E-value=1.4 Score=45.16 Aligned_cols=37 Identities=27% Similarity=0.483 Sum_probs=28.9
Q ss_pred HhhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
..++.++|+|.| .|++|..+++.|+..| -+++++|.+
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 54 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNF 54 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECC
Confidence 556778999998 5999999999999999 578887764
No 365
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=91.62 E-value=0.4 Score=50.85 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=30.8
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 215 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTR 215 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 4679999999999999999999999999988875
No 366
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=91.55 E-value=0.69 Score=46.33 Aligned_cols=60 Identities=18% Similarity=0.154 Sum_probs=38.2
Q ss_pred cCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 363 SSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
++++|+|.| .||+|..+|+.|+..|.. +.+++. | ...+.+.+++.+.+.. .++..
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~-V~~~~~---------~------------~~~~~~~~~~~~~~~~--~~~~~ 80 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWR-VGVNYA---------A------------NREAADAVVAAITESG--GEAVA 80 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEES---------S------------CHHHHHHHHHHHHHTT--CEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcC---------C------------ChhHHHHHHHHHHhcC--CcEEE
Confidence 356777776 589999999999999975 333321 0 2234556666666654 35555
Q ss_pred Eeccc
Q 005745 442 VVMAI 446 (679)
Q Consensus 442 ~~~~I 446 (679)
+..++
T Consensus 81 ~~~Dl 85 (272)
T 4e3z_A 81 IPGDV 85 (272)
T ss_dssp EECCT
T ss_pred EEcCC
Confidence 55544
No 367
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=91.47 E-value=0.52 Score=46.34 Aligned_cols=36 Identities=28% Similarity=0.481 Sum_probs=30.3
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r 46 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGS 46 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 4678899999975 7999999999999995 5777665
No 368
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=91.42 E-value=0.71 Score=48.70 Aligned_cols=92 Identities=22% Similarity=0.252 Sum_probs=58.1
Q ss_pred hcCCeEEEEcCChHHHHHHHHHH-Hc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLM-AW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La-~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
.+..||.|||+|.+|...++.|. .. |+.-+.++|. ...|++.+++... +.+
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~----------------------~~~~~~~~a~~~g-----~~~ 73 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI----------------------VAGRAQAALDKYA-----IEA 73 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS----------------------STTHHHHHHHHHT-----CCC
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC----------------------CHHHHHHHHHHhC-----CCC
Confidence 34568999999999999999998 43 4444445554 2335555554432 111
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
..+ ...+++++ +.|+|+.|+-+. ...-+...|.+.||+++.
T Consensus 74 ~~~-----------------------~~~~~ll~~~~~D~V~i~tp~~-~h~~~~~~al~aGk~Vl~ 116 (357)
T 3ec7_A 74 KDY-----------------------NDYHDLINDKDVEVVIITASNE-AHADVAVAALNANKYVFC 116 (357)
T ss_dssp EEE-----------------------SSHHHHHHCTTCCEEEECSCGG-GHHHHHHHHHHTTCEEEE
T ss_pred eee-----------------------CCHHHHhcCCCCCEEEEcCCcH-HHHHHHHHHHHCCCCEEe
Confidence 122 23445555 589999998764 444455667788888775
No 369
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=91.41 E-value=0.64 Score=46.17 Aligned_cols=30 Identities=30% Similarity=0.346 Sum_probs=25.3
Q ss_pred eEEEEcC-ChHHHHHHHHHHHc--CCCEEEEEeC
Q 005745 366 KCLLLGA-GTLGCQVARMLMAW--GVRKITLLDN 396 (679)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~--GVg~ItlVD~ 396 (679)
+|+|.|+ |.+|+.+++.|+.. |. +++.+|.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEc
Confidence 5899997 99999999999998 74 5777665
No 370
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=91.40 E-value=0.39 Score=50.41 Aligned_cols=88 Identities=13% Similarity=0.092 Sum_probs=55.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
..||.|||+|.+|...++.|... |+.-+.++|. ...|++.+++.. ++.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~----------------------~~~~~~~~~~~~-----g~~---- 53 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR----------------------TEDKREKFGKRY-----NCA---- 53 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS----------------------SHHHHHHHHHHH-----TCC----
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC----------------------CHHHHHHHHHHc-----CCC----
Confidence 35899999999999999999876 5444445554 222444444432 111
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhh--ccCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLI--LSHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li--~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
...+.++++ .+.|+|+.|+-+.. ..-+...|.+.||+++.
T Consensus 54 ---------------------~~~~~~~~l~~~~~D~V~i~tp~~~-h~~~~~~al~~gk~vl~ 95 (354)
T 3db2_A 54 ---------------------GDATMEALLAREDVEMVIITVPNDK-HAEVIEQCARSGKHIYV 95 (354)
T ss_dssp ---------------------CCSSHHHHHHCSSCCEEEECSCTTS-HHHHHHHHHHTTCEEEE
T ss_pred ---------------------CcCCHHHHhcCCCCCEEEEeCChHH-HHHHHHHHHHcCCEEEE
Confidence 123445566 46889998888744 33444566778887765
No 371
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=91.37 E-value=0.74 Score=50.12 Aligned_cols=99 Identities=10% Similarity=0.055 Sum_probs=62.3
Q ss_pred hcCCeEEEEcCChHHHHHHHHHHHc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhC-CCcEE
Q 005745 362 LSSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIF-PAVAA 439 (679)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~in-P~v~v 439 (679)
.+..||.|||+|..|...++.|... |+.-..++|. ...|++.+++.+.+.. |.+.
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~----------------------~~~~~~~~a~~~~~~g~~~~~- 74 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP----------------------DPYMVGRAQEILKKNGKKPAK- 74 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS----------------------CHHHHHHHHHHHHHTTCCCCE-
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC----------------------CHHHHHHHHHHHHhcCCCCCc-
Confidence 3456899999999999999988864 3333334443 3446777777665532 3222
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
.+.. ..+..+++++ +.|+|+.|+-+. ...-+...|.+.||.++.
T Consensus 75 -~~~~-------------------~~~~~~~ll~~~~vD~V~i~tp~~-~h~~~~~~al~aGkhV~~ 120 (444)
T 2ixa_A 75 -VFGN-------------------GNDDYKNMLKDKNIDAVFVSSPWE-WHHEHGVAAMKAGKIVGM 120 (444)
T ss_dssp -EECS-------------------STTTHHHHTTCTTCCEEEECCCGG-GHHHHHHHHHHTTCEEEE
T ss_pred -eecc-------------------CCCCHHHHhcCCCCCEEEEcCCcH-HHHHHHHHHHHCCCeEEE
Confidence 2210 1224566665 589999998764 444555667778887765
No 372
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=91.36 E-value=0.61 Score=46.75 Aligned_cols=39 Identities=10% Similarity=0.123 Sum_probs=32.5
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCcc
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRV 399 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~V 399 (679)
-.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.-
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~ 63 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIK 63 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCC
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChh
Confidence 4578889999975 7999999999999996 6888887543
No 373
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.35 E-value=0.33 Score=50.92 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeCC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~D 397 (679)
..||.|+|+|.+|..++..|+..|. ++|.++|-+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999885 689999974
No 374
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=91.34 E-value=0.69 Score=46.60 Aligned_cols=30 Identities=20% Similarity=0.349 Sum_probs=24.2
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEE
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKI 391 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~I 391 (679)
+++++|+|.|+ ||+|..+|+.|++.|..-+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv 55 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVV 55 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE
Confidence 56788999976 7999999999999997443
No 375
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=91.34 E-value=0.58 Score=48.32 Aligned_cols=31 Identities=19% Similarity=0.291 Sum_probs=25.3
Q ss_pred eEEEEcCChHHHHH-HHHHHHcCCCEEEEEeC
Q 005745 366 KCLLLGAGTLGCQV-ARMLMAWGVRKITLLDN 396 (679)
Q Consensus 366 kVlIvGaGgLGs~V-A~~La~~GVg~ItlVD~ 396 (679)
||+|||+|.+|... ++.|...|+.-+.++|.
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~ 33 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMST 33 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECS
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECC
Confidence 79999999999998 88888866655556665
No 376
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=91.32 E-value=0.76 Score=47.90 Aligned_cols=86 Identities=16% Similarity=0.074 Sum_probs=54.6
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEE
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~ 440 (679)
+++++|+|.|+ ||+|..+|+.|+..|.. +.+.+.+.. +- ...+.+.+++.+.+..+ ++.
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~-V~~~~r~~~--------------~r---~~~~~~~l~~~~~~~~~--~~~ 62 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHR-VYASMRDIV--------------GR---NASNVEAIAGFARDNDV--DLR 62 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCTT--------------TT---THHHHHHHHHHHHHHTC--CEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEecCccc--------------cc---CHHHHHHHHHHHHhcCC--cEE
Confidence 45678888885 89999999999999964 555454321 11 23456667777766544 455
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhc-------cCCEEEEeCC
Q 005745 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL-------SHDVIFLLTD 483 (679)
Q Consensus 441 ~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~-------~~DvV~~~tD 483 (679)
.+..++ .+.+.+.++++ ..|+||.+..
T Consensus 63 ~~~~Dv----------------td~~~v~~~~~~~~~~~g~iD~lVnnAG 96 (324)
T 3u9l_A 63 TLELDV----------------QSQVSVDRAIDQIIGEDGRIDVLIHNAG 96 (324)
T ss_dssp EEECCT----------------TCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EEEeec----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 555544 23344444443 7899999875
No 377
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=91.28 E-value=0.59 Score=48.47 Aligned_cols=34 Identities=26% Similarity=0.569 Sum_probs=31.4
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|.|+|++|..++..+..+|...++.+|.
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~ 193 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEec
Confidence 4678999999999999999999999999998886
No 378
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=91.21 E-value=0.52 Score=47.42 Aligned_cols=35 Identities=17% Similarity=0.326 Sum_probs=30.0
Q ss_pred hcCCeEEEEcC---ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 362 LSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 362 L~~~kVlIvGa---GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~ 41 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLN 41 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCC
Confidence 56789999998 6999999999999995 57787753
No 379
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.17 E-value=0.21 Score=51.55 Aligned_cols=34 Identities=32% Similarity=0.489 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeCC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~D 397 (679)
..||+|||+|.+|+.+|..|+..|. ++++++|.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999995 589999875
No 380
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.16 E-value=0.26 Score=51.65 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=30.5
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~ 199 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGS 199 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECC
Confidence 3678999999999999999999999988888875
No 381
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=91.16 E-value=0.36 Score=53.30 Aligned_cols=94 Identities=12% Similarity=0.038 Sum_probs=59.0
Q ss_pred cCCeEEEEcCChH--HHHHHHHHHHcC--CCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcE
Q 005745 363 SSRKCLLLGAGTL--GCQVARMLMAWG--VRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (679)
Q Consensus 363 ~~~kVlIvGaGgL--Gs~VA~~La~~G--Vg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~ 438 (679)
++.||.|||+|+. |..++..|+..- .++|+|+|.|.= -+ .+.+..++.+.+ ...+
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~e--------------~l-----e~~~~~~~~l~~--~~~~ 62 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFE--------------AA-----QKNEVIGNHSGN--GRWR 62 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSHH--------------HH-----HHHHHHHTTSTT--SCEE
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCHH--------------HH-----HHHHHHHHHHhc--cCCe
Confidence 4569999999997 689999888732 349999987420 00 011112222222 2333
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeC--CChHHHHHHHHHHHhcCC
Q 005745 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLT--DTRESRWLPTLLCANTNK 500 (679)
Q Consensus 439 v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~t--Ds~esR~lin~~~~~~~k 500 (679)
+++ ..+.++.++++|+||.+. ...+.|..=-++..++|.
T Consensus 63 I~~-----------------------TtD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~ 103 (450)
T 3fef_A 63 YEA-----------------------VSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGI 103 (450)
T ss_dssp EEE-----------------------ESSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTC
T ss_pred EEE-----------------------ECCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCc
Confidence 332 234567789999999998 566777655566666665
No 382
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=91.06 E-value=0.72 Score=45.45 Aligned_cols=34 Identities=21% Similarity=0.293 Sum_probs=27.3
Q ss_pred hcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
|++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 36 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYA 36 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4677888887 57999999999999996 5666553
No 383
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=90.96 E-value=0.57 Score=47.04 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=28.0
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+.+++|+|.|+ ||+|..+|+.|+..|. ++.++|.+
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~ 38 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARR 38 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 35678888875 8999999999999996 67777753
No 384
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=90.95 E-value=0.51 Score=50.46 Aligned_cols=92 Identities=25% Similarity=0.259 Sum_probs=62.1
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~ 443 (679)
.||.|||+ |.+|.++.+.|..--.-+|+.+.. .... |++ +.+.+|... ..
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S---------------~~~a---G~~--------~~~~~p~~~---~~ 64 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSS---------------RTYA---GKK--------LEEIFPSTL---EN 64 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC---------------STTT---TSB--------HHHHCGGGC---CC
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeC---------------cccc---cCC--------hHHhChhhc---cC
Confidence 58999975 889999999999877666666543 2233 653 444455544 12
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEE
Q 005745 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (679)
Q Consensus 444 ~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~a 505 (679)
..+ .+ .+.+++++++|+||.|+....++-+...+ .|..+|+.
T Consensus 65 l~~----------------~~-~~~~~~~~~~Dvvf~alp~~~s~~~~~~~---~g~~VIDl 106 (351)
T 1vkn_A 65 SIL----------------SE-FDPEKVSKNCDVLFTALPAGASYDLVREL---KGVKIIDL 106 (351)
T ss_dssp CBC----------------BC-CCHHHHHHHCSEEEECCSTTHHHHHHTTC---CSCEEEES
T ss_pred ceE----------------Ee-CCHHHhhcCCCEEEECCCcHHHHHHHHHh---CCCEEEEC
Confidence 111 11 12334457899999999999988776665 68889985
No 385
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.94 E-value=0.35 Score=49.79 Aligned_cols=37 Identities=19% Similarity=0.373 Sum_probs=31.7
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+||+++.++|-|+ +|+|-.+|+.|++.|. ++.++|.+
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~ 62 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRR 62 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 4799999999975 6899999999999997 67787753
No 386
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=90.91 E-value=0.62 Score=49.29 Aligned_cols=34 Identities=26% Similarity=0.356 Sum_probs=30.9
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+...|.++++.+|.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~ 226 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDI 226 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 4678999999999999999999999998988875
No 387
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=90.89 E-value=0.61 Score=46.82 Aligned_cols=36 Identities=25% Similarity=0.319 Sum_probs=28.9
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~ 50 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYA 50 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 4578899999975 6999999999999996 4555443
No 388
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=90.89 E-value=0.65 Score=45.89 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=28.5
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++++++|.|+ ||+|..+++.|+..|. ++.++|.
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 37 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGA-RLVACDI 37 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999975 8999999999999996 5667665
No 389
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=90.84 E-value=0.9 Score=52.02 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=28.0
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.|+ |.+|+++++.|+..|. +++++|.
T Consensus 8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~-~V~~~~r 43 (699)
T 1z45_A 8 ESTSKIVLVTGGAGYIGSHTVVELIENGY-DCVVADN 43 (699)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence 356789999985 9999999999999995 6777765
No 390
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=90.79 E-value=0.45 Score=49.71 Aligned_cols=33 Identities=33% Similarity=0.522 Sum_probs=28.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC-CEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GV-g~ItlVD~D 397 (679)
.||.|+|+|.+|..++..|+..|. ++|.|+|-+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 34 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD 34 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 489999999999999999998874 679998863
No 391
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=90.74 E-value=0.74 Score=48.55 Aligned_cols=34 Identities=21% Similarity=0.333 Sum_probs=30.3
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 224 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGT 224 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 3679999999999999999999999988888774
No 392
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=90.70 E-value=0.61 Score=48.56 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=34.0
Q ss_pred hhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEEeeCc
Q 005745 466 RRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAALGF 509 (679)
Q Consensus 466 ~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I~aalG~ 509 (679)
.++++++.+.|+|||.|. ++.-.-.-..|.++|+|+|.+..|+
T Consensus 80 ~dl~~ll~~aDVvIDFT~-p~a~~~~~~~~l~~Gv~vViGTTG~ 122 (288)
T 3ijp_A 80 DDPESAFSNTEGILDFSQ-PQASVLYANYAAQKSLIHIIGTTGF 122 (288)
T ss_dssp SCHHHHTTSCSEEEECSC-HHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred CCHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEEECCCC
Confidence 456677889999999995 5555556678999999999877676
No 393
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.68 E-value=0.87 Score=50.43 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=30.9
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCc
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~ 398 (679)
.+.||.|||+|.+|+.+|..|+..|. +++++|.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCH
Confidence 35799999999999999999999996 689998753
No 394
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.63 E-value=1.2 Score=46.61 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=28.5
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+...|.+ ++.+|.
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~ 200 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTAR 200 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcC
Confidence 467999999999999999999899986 777764
No 395
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=90.57 E-value=0.49 Score=49.23 Aligned_cols=90 Identities=10% Similarity=0.060 Sum_probs=55.2
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
+..||.|||+|.+|...++.|... |+.-+.++|.+ ..|++.+++. ++ +
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~----------------------~~~~~~~~~~----~~-~---- 52 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRR----------------------LENAQKMAKE----LA-I---- 52 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSS----------------------SHHHHHHHHH----TT-C----
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCC----------------------HHHHHHHHHH----cC-C----
Confidence 346899999999999999999986 33323344442 2344444433 21 1
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
. ......+++++ +.|+|+.|+-+..- .-+...|.+.||+++.
T Consensus 53 -~-------------------~~~~~~~~ll~~~~~D~V~i~tp~~~h-~~~~~~al~~gk~vl~ 96 (330)
T 3e9m_A 53 -P-------------------VAYGSYEELCKDETIDIIYIPTYNQGH-YSAAKLALSQGKPVLL 96 (330)
T ss_dssp -C-------------------CCBSSHHHHHHCTTCSEEEECCCGGGH-HHHHHHHHHTTCCEEE
T ss_pred -C-------------------ceeCCHHHHhcCCCCCEEEEcCCCHHH-HHHHHHHHHCCCeEEE
Confidence 0 01234455665 78999988877543 3344566777887764
No 396
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=90.55 E-value=0.51 Score=49.78 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=30.2
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+...|.++++.+|.
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~ 223 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 223 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 3679999999999999999998999988888875
No 397
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=90.53 E-value=0.8 Score=45.84 Aligned_cols=34 Identities=24% Similarity=0.481 Sum_probs=26.2
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEe
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLD 395 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD 395 (679)
.+++++|+|.|+ ||+|..+|+.|++.|.. +.++|
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~~ 56 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMA-VAVSH 56 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEE
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEc
Confidence 356777888875 89999999999999974 55655
No 398
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=90.40 E-value=0.46 Score=49.67 Aligned_cols=88 Identities=17% Similarity=0.201 Sum_probs=54.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005745 365 RKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~ 443 (679)
.||.|||+|.+|...++.|... |+.-+.++|. ...|++.+++... +. ..
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~----------------------~~~~~~~~~~~~~-----~~-~~-- 52 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDV----------------------REDRLREMKEKLG-----VE-KA-- 52 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS----------------------CHHHHHHHHHHHT-----CS-EE--
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC----------------------CHHHHHHHHHHhC-----CC-ce--
Confidence 4899999999999999999875 3333335453 2234444444321 10 11
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 444 ~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
..+.+++++ +.|+|+.|+-+.. ..-+...|.+.|++++.
T Consensus 53 ---------------------~~~~~~ll~~~~~D~V~i~tp~~~-h~~~~~~al~~gk~v~~ 93 (344)
T 3ezy_A 53 ---------------------YKDPHELIEDPNVDAVLVCSSTNT-HSELVIACAKAKKHVFC 93 (344)
T ss_dssp ---------------------ESSHHHHHHCTTCCEEEECSCGGG-HHHHHHHHHHTTCEEEE
T ss_pred ---------------------eCCHHHHhcCCCCCEEEEcCCCcc-hHHHHHHHHhcCCeEEE
Confidence 223455665 7899999997644 34445567778887774
No 399
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=90.39 E-value=0.34 Score=48.23 Aligned_cols=37 Identities=19% Similarity=0.250 Sum_probs=30.0
Q ss_pred HHhhcCCeEEEEcCC---hHHHHHHHHHHHcCCCEEEEEeC
Q 005745 359 LDILSSRKCLLLGAG---TLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 359 q~kL~~~kVlIvGaG---gLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+-.+++++|+|.|++ |+|..+|+.|+..|. ++.++|.
T Consensus 15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~-~v~~~~~ 54 (267)
T 3gdg_A 15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYA 54 (267)
T ss_dssp HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSC-EEEECBS
T ss_pred ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEeC
Confidence 345788999999986 999999999999996 4555554
No 400
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=90.38 E-value=0.54 Score=47.63 Aligned_cols=29 Identities=24% Similarity=0.427 Sum_probs=23.5
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEe
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLD 395 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD 395 (679)
++|+|.|+ |.+|..+++.|+..| ++..++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~ 31 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVID 31 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEE
Confidence 47999996 999999999999999 444443
No 401
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=90.38 E-value=1.3 Score=49.53 Aligned_cols=83 Identities=19% Similarity=0.264 Sum_probs=58.9
Q ss_pred CCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
+++|+|.| .|+||..+++.|+..|..++.+++...- ...+++.+.+.|.+. +.++..+
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~-------------------~~~~~~~l~~~l~~~--g~~v~~~ 317 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGP-------------------EAPGAAELAEELRGH--GCEVVHA 317 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGG-------------------GSTTHHHHHHHHHTT--TCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCc-------------------ccHHHHHHHHHHHhc--CCEEEEE
Confidence 56788885 7999999999999999999999876321 112344555566653 4567666
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhcc--CCEEEEeCC
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILS--HDVIFLLTD 483 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~--~DvV~~~tD 483 (679)
..++ .+.+.+.+++++ .|+||.+..
T Consensus 318 ~~Dv----------------td~~~v~~~~~~~~ld~VVh~AG 344 (511)
T 2z5l_A 318 ACDV----------------AERDALAALVTAYPPNAVFHTAG 344 (511)
T ss_dssp ECCS----------------SCHHHHHHHHHHSCCSEEEECCC
T ss_pred EeCC----------------CCHHHHHHHHhcCCCcEEEECCc
Confidence 6555 356667777765 899998764
No 402
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=90.37 E-value=1.1 Score=46.86 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=28.5
Q ss_pred CeEEEEc-CChHHHHHHHHHHHcCC-CEEEEEeCC
Q 005745 365 RKCLLLG-AGTLGCQVARMLMAWGV-RKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvG-aGgLGs~VA~~La~~GV-g~ItlVD~D 397 (679)
.||+|+| +|.+|..++..|+..|. .+|+++|-+
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~ 43 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVV 43 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 5899999 79999999999998774 579998854
No 403
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=90.33 E-value=0.26 Score=51.32 Aligned_cols=33 Identities=30% Similarity=0.443 Sum_probs=29.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+.||+|||+|-.|..+|..|++.|+ +++|+|.+
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~-~v~v~Er~ 33 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI-KVTIYERN 33 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEecC
Confidence 4689999999999999999999998 58888865
No 404
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=90.29 E-value=0.88 Score=48.00 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=30.3
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 228 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDI 228 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 3679999999999999999999999988888874
No 405
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=90.28 E-value=0.26 Score=50.61 Aligned_cols=32 Identities=25% Similarity=0.536 Sum_probs=28.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
++|.|||+|..|+.+|..|+..|. +++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 579999999999999999999996 78888863
No 406
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=90.28 E-value=0.51 Score=47.12 Aligned_cols=30 Identities=30% Similarity=0.410 Sum_probs=26.6
Q ss_pred eEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+|+|.|+ |.+|..+++.|+..|. +++.+|.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r 37 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDK 37 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEecc
Confidence 7999995 9999999999999984 7777776
No 407
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=90.28 E-value=0.54 Score=48.05 Aligned_cols=36 Identities=22% Similarity=0.247 Sum_probs=29.8
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+|++++|+|.|+ ||+|..+|+.|++.|.. +.++|.
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~~ 81 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGAD-VAINYL 81 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 4678999999975 79999999999999964 666554
No 408
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=90.24 E-value=1 Score=47.49 Aligned_cols=34 Identities=26% Similarity=0.368 Sum_probs=30.4
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~ 224 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDI 224 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 4679999999999999999999999988888764
No 409
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=90.19 E-value=1.2 Score=44.62 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=27.2
Q ss_pred HhhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r 43 (276)
T 1mxh_A 7 EASECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYR 43 (276)
T ss_dssp ----CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 346778888886 57999999999999996 6777765
No 410
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=90.15 E-value=1.1 Score=45.65 Aligned_cols=34 Identities=29% Similarity=0.260 Sum_probs=27.4
Q ss_pred hhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEe
Q 005745 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLD 395 (679)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD 395 (679)
.+++++|+|.| .||+|..+|+.|++.|. ++.++|
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~ 40 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHY 40 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEc
Confidence 46778888886 57999999999999996 677776
No 411
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=90.05 E-value=0.73 Score=47.02 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=28.4
Q ss_pred cCCeEEEEcC-ChHHHHHHHHHHHcCC-CEEEEEeCC
Q 005745 363 SSRKCLLLGA-GTLGCQVARMLMAWGV-RKITLLDNG 397 (679)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GV-g~ItlVD~D 397 (679)
++.+|+|.|+ |++|..+++.|+..|- -+++.+|..
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 3468999995 9999999999999984 478877764
No 412
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=89.98 E-value=0.22 Score=55.00 Aligned_cols=40 Identities=20% Similarity=0.436 Sum_probs=37.2
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCC--CEEEEEeCCcc
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGV--RKITLLDNGRV 399 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GV--g~ItlVD~D~V 399 (679)
++|+..||++.|+|+.|..+|+.|+..|+ ++|.++|..=+
T Consensus 215 k~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 215 KDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGS 256 (487)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccc
Confidence 57899999999999999999999999999 89999999644
No 413
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=89.98 E-value=0.98 Score=46.25 Aligned_cols=36 Identities=28% Similarity=0.432 Sum_probs=30.0
Q ss_pred hcCCeEEEEc-CChHHHHHHHHHHHcCC------CEEEEEeCC
Q 005745 362 LSSRKCLLLG-AGTLGCQVARMLMAWGV------RKITLLDNG 397 (679)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GV------g~ItlVD~D 397 (679)
+++.+|+|.| .|++|+.+++.|+..|. .+++++|.+
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 4567899999 59999999999999993 578887763
No 414
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=89.90 E-value=0.5 Score=49.34 Aligned_cols=34 Identities=26% Similarity=0.352 Sum_probs=30.4
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..+++.+...|.++++.+|.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~ 200 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEP 200 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 6789999999999999999999999878887764
No 415
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=89.86 E-value=0.98 Score=45.52 Aligned_cols=31 Identities=23% Similarity=0.553 Sum_probs=26.7
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+||+|.|+ |.+|.++++.|+..|. +++.+|.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY-EVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-EEEEEeC
Confidence 47999998 9999999999999996 6777665
No 416
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=89.86 E-value=0.8 Score=46.31 Aligned_cols=32 Identities=25% Similarity=0.267 Sum_probs=27.4
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++|+|.|+ |.+|..+++.|+..| -+++.+|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCGF 34 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEcc
Confidence 468999998 999999999999999 57777775
No 417
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=89.76 E-value=0.88 Score=45.49 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=28.0
Q ss_pred cCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
..++|+|.|+ |.+|+++++.|+..| -+++.+|..
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 45 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKN-VEVIPTDVQ 45 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEECTT
T ss_pred ccceEEEECCCChHHHHHHHHHHhCC-CeEEeccCc
Confidence 4678999976 899999999999998 467777764
No 418
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=89.71 E-value=0.33 Score=45.20 Aligned_cols=33 Identities=33% Similarity=0.596 Sum_probs=29.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCc
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~ 398 (679)
.+|+|||+|-.|+++|..|++.|. +++++|...
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~-~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGL-KVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 379999999999999999999996 799999764
No 419
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=89.64 E-value=2.9 Score=43.71 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=27.1
Q ss_pred cCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..++|+|.|+ |.+|..+++.|+..|. +++.++.
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R 37 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVH 37 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 3578999996 9999999999999884 5666654
No 420
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=89.61 E-value=0.68 Score=47.87 Aligned_cols=32 Identities=13% Similarity=0.243 Sum_probs=24.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcC-CCEEEEEeC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWG-VRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~G-Vg~ItlVD~ 396 (679)
.||.|||+|.+|...++.|...+ +.-+.++|.
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~ 34 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR 34 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC
Confidence 37999999999999999998864 333335453
No 421
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=89.60 E-value=1.5 Score=48.53 Aligned_cols=84 Identities=20% Similarity=0.277 Sum_probs=57.6
Q ss_pred cCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 363 SSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
.+++|+|.| .||||..+++.|+..|..++.+++...- ...+++.+.+.|.+. +.++..
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~-------------------~~~~~~~l~~~l~~~--g~~v~~ 283 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGP-------------------DADGAGELVAELEAL--GARTTV 283 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGG-------------------GSTTHHHHHHHHHHT--TCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCC-------------------CcHHHHHHHHHHHhc--CCEEEE
Confidence 356788885 7899999999999999999999876421 112445555566654 345666
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccC------CEEEEeCC
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSH------DVIFLLTD 483 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~------DvV~~~tD 483 (679)
+..++ .+.+.+..+++.. |+||.+..
T Consensus 284 ~~~Dv----------------~d~~~v~~~~~~i~~~g~ld~VIh~AG 315 (486)
T 2fr1_A 284 AACDV----------------TDRESVRELLGGIGDDVPLSAVFHAAA 315 (486)
T ss_dssp EECCT----------------TCHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred EEeCC----------------CCHHHHHHHHHHHHhcCCCcEEEECCc
Confidence 66554 3456666666655 88888764
No 422
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=89.55 E-value=1.3 Score=43.99 Aligned_cols=33 Identities=12% Similarity=0.221 Sum_probs=25.6
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCC-EEEEEeC
Q 005745 364 SRKCLLLGA-GTLGCQVARMLMAWGVR-KITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg-~ItlVD~ 396 (679)
+++|+|.|+ ||+|..+|+.|+..|.+ ++.+++.
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r 36 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVAR 36 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecC
Confidence 467888874 79999999999999864 5555554
No 423
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=89.54 E-value=1.1 Score=47.61 Aligned_cols=84 Identities=15% Similarity=0.109 Sum_probs=56.3
Q ss_pred HhhcCCeEEEEcC-ChHHHHHHHHHHHcCC-C-----EEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHh
Q 005745 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGV-R-----KITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLER 432 (679)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GV-g-----~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~ 432 (679)
..++..||.|+|| |++|..++..|+...+ + +|.|+|-. . ++.+++-.+..|..
T Consensus 20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~---------------~-----~~~~~~Gva~DL~~ 79 (345)
T 4h7p_A 20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIE---------------P-----ALKALAGVEAELED 79 (345)
T ss_dssp --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG---------------G-----GHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCC---------------C-----ccccchhhhhhhhh
Confidence 4556679999997 9999999999987654 3 67777731 1 34566766667777
Q ss_pred hCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCC
Q 005745 433 IFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (679)
Q Consensus 433 inP~v~v~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (679)
.........+. ..+..+.++++|+||.+..-
T Consensus 80 ~~~~~~~~~~~---------------------~~~~~~a~~~advVvi~aG~ 110 (345)
T 4h7p_A 80 CAFPLLDKVVV---------------------TADPRVAFDGVAIAIMCGAF 110 (345)
T ss_dssp TTCTTEEEEEE---------------------ESCHHHHTTTCSEEEECCCC
T ss_pred cCccCCCcEEE---------------------cCChHHHhCCCCEEEECCCC
Confidence 65444443332 12335568999999998763
No 424
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=89.49 E-value=1.1 Score=47.16 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=30.3
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~ 223 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI 223 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 3679999999999999999999999988888764
No 425
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=89.49 E-value=0.33 Score=48.75 Aligned_cols=32 Identities=25% Similarity=0.197 Sum_probs=29.2
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCc
Q 005745 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (679)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~ 398 (679)
||+|||+|.+|+.+|..|++.|. +++++|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCc
Confidence 79999999999999999999996 899998754
No 426
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=89.47 E-value=0.59 Score=46.37 Aligned_cols=33 Identities=30% Similarity=0.361 Sum_probs=26.4
Q ss_pred cCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..++|+|.|+ ||+|.++|+.|+..|. ++.+++.
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~ 39 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYH 39 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcC
Confidence 4578888876 7899999999999997 5556544
No 427
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=89.47 E-value=0.56 Score=48.08 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=25.3
Q ss_pred cCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEe
Q 005745 363 SSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLD 395 (679)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD 395 (679)
++++|||.| +|.+|+.+++.|+..|. +++.++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~ 36 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGY-TVRATV 36 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEE
Confidence 568899998 79999999999999995 455444
No 428
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=89.45 E-value=1.2 Score=44.61 Aligned_cols=36 Identities=28% Similarity=0.356 Sum_probs=28.6
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 60 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGH-RVIISYRT 60 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 467889999985 8999999999999996 57787764
No 429
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=89.44 E-value=1.7 Score=48.49 Aligned_cols=86 Identities=21% Similarity=0.255 Sum_probs=62.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEec
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~~ 444 (679)
.+|+|+|+|-+|..+|+.|...|. .++++|.|.-....+. ..+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~----------------------------------~~i~g 393 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV-PFILIDRQESPVCNDH----------------------------------VVVYG 393 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCCSSCCSS----------------------------------CEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-CEEEEECChHHHhhcC----------------------------------CEEEe
Confidence 899999999999999999999995 5888887643211110 11211
Q ss_pred ccCCCCCCCCCccccccccChhhHHH-hhccCCEEEEeCCChHHHHHHHHHHHhcCCe
Q 005745 445 AIPMPGHPVPCQEEDSVLDDCRRLTD-LILSHDVIFLLTDTRESRWLPTLLCANTNKI 501 (679)
Q Consensus 445 ~Ipm~gh~~~~~~~~~~~~~~~~l~~-li~~~DvV~~~tDs~esR~lin~~~~~~~kp 501 (679)
.+ .+.+-+.+ -++++|.|+.++++-+.-.++...+++.+..
T Consensus 394 ------D~----------t~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~ 435 (565)
T 4gx0_A 394 ------DA----------TVGQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSH 435 (565)
T ss_dssp ------CS----------SSSTHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred ------CC----------CCHHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCC
Confidence 11 12333433 3789999999999999999999999998864
No 430
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=89.43 E-value=0.33 Score=51.82 Aligned_cols=36 Identities=39% Similarity=0.489 Sum_probs=33.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCcc
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRV 399 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~V 399 (679)
...|+|||+|..|+.+|..|++.|..+++++|.+..
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 458999999999999999999999878999998766
No 431
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=89.37 E-value=0.5 Score=48.12 Aligned_cols=34 Identities=35% Similarity=0.445 Sum_probs=27.8
Q ss_pred hcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
|+++.++|-| ++|+|..+|+.|+..|. ++.+.|.
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~ 41 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDI 41 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 6788888886 57999999999999996 5767554
No 432
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=89.37 E-value=0.67 Score=46.97 Aligned_cols=34 Identities=29% Similarity=0.521 Sum_probs=28.9
Q ss_pred hcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
|++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 37 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGA-RVAVLDK 37 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence 6788999997 57999999999999996 6777765
No 433
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=89.34 E-value=0.34 Score=51.18 Aligned_cols=36 Identities=25% Similarity=0.460 Sum_probs=31.9
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCC-EEEEEeCCc
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVR-KITLLDNGR 398 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg-~ItlVD~D~ 398 (679)
.++||+|||+|.-|..+|..|.+.|-+ +|||||...
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 378999999999999999999999875 899998754
No 434
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.33 E-value=1.3 Score=46.07 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=29.2
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+..+|-.+++.+|.
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~ 204 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL 204 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 4679999999999999998888887788888765
No 435
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=89.31 E-value=0.93 Score=47.53 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=28.3
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCC------EEEEEeC
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAWGVR------KITLLDN 396 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg------~ItlVD~ 396 (679)
.||+|+|+ |.+|+.++..|+..|.- +|.++|.
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di 44 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEI 44 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcC
Confidence 58999998 99999999999998873 7888876
No 436
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.29 E-value=0.26 Score=51.49 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=28.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..||+|||+|.+|+.+|..|++.|. .++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~-~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE-AINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4689999999999999999999995 6777665
No 437
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=89.24 E-value=1.3 Score=46.04 Aligned_cols=35 Identities=29% Similarity=0.252 Sum_probs=27.5
Q ss_pred HhhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEe
Q 005745 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLD 395 (679)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD 395 (679)
..+++++|+|.| .||+|..+|+.|++.|. ++.++|
T Consensus 42 ~~l~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~ 77 (328)
T 2qhx_A 42 TAPTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHY 77 (328)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEc
Confidence 347788888886 57999999999999996 577776
No 438
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=89.16 E-value=0.42 Score=49.67 Aligned_cols=36 Identities=22% Similarity=0.444 Sum_probs=31.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVA 400 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve 400 (679)
...|+|||+|..|+.+|..|++.|. +++++|.+.+.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~-~V~vle~~~~~ 41 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGY-SVHILARDLPE 41 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-EEEEEeccCCC
Confidence 4689999999999999999999996 79999987653
No 439
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=89.14 E-value=0.81 Score=47.51 Aligned_cols=33 Identities=21% Similarity=0.382 Sum_probs=28.9
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+...|. +++.+|.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~ 198 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDI 198 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeC
Confidence 46799999999999999999999998 7777665
No 440
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=89.14 E-value=2.8 Score=42.55 Aligned_cols=32 Identities=28% Similarity=0.439 Sum_probs=26.8
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHc-CCCEEEEEeCC
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAW-GVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~-GVg~ItlVD~D 397 (679)
.+|+|.|+ |.+|..+++.|+.. | -+++.+|..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH-YEVYGLDIG 34 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT-CEEEEEESC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC-CEEEEEeCC
Confidence 37999998 99999999999998 6 467777763
No 441
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.12 E-value=0.34 Score=54.00 Aligned_cols=35 Identities=17% Similarity=0.368 Sum_probs=32.1
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.|.+++|+|+|+|++|..+|+.|++.|. ++.++|.
T Consensus 262 ~L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~ 296 (488)
T 3ond_A 262 MIAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEI 296 (488)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 4789999999999999999999999998 7888776
No 442
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=89.11 E-value=2.4 Score=47.18 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=26.4
Q ss_pred CCeEEEEcCChH--HHHHHHHHHHc-C--CCEEEEEeCC
Q 005745 364 SRKCLLLGAGTL--GCQVARMLMAW-G--VRKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvGaGgL--Gs~VA~~La~~-G--Vg~ItlVD~D 397 (679)
..||.|||+|++ |..+|..|+.. + ..+++|+|.+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~ 41 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDID 41 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCC
Confidence 568999999996 57677788743 2 5789999973
No 443
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=89.04 E-value=3.6 Score=41.82 Aligned_cols=32 Identities=34% Similarity=0.551 Sum_probs=26.7
Q ss_pred eEEEEc-CChHHHHHHHHHHHc---CC--CEEEEEeCC
Q 005745 366 KCLLLG-AGTLGCQVARMLMAW---GV--RKITLLDNG 397 (679)
Q Consensus 366 kVlIvG-aGgLGs~VA~~La~~---GV--g~ItlVD~D 397 (679)
||+|.| .|.+|+.+++.|+.. |+ -+++.+|..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~ 39 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSL 39 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECC
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECC
Confidence 699998 599999999999996 64 578888763
No 444
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=88.98 E-value=0.84 Score=44.43 Aligned_cols=31 Identities=26% Similarity=0.332 Sum_probs=25.4
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
++|+|.|+ ||+|..+|+.|+..|.. +.++|.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r 33 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKA-TYLTGR 33 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCE-EEEEeC
Confidence 46888875 69999999999999965 777775
No 445
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=88.88 E-value=1.3 Score=46.60 Aligned_cols=34 Identities=21% Similarity=0.409 Sum_probs=30.2
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+...|..+++.+|.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~ 225 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 225 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 4679999999999999999999999988888764
No 446
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=88.85 E-value=0.38 Score=50.84 Aligned_cols=36 Identities=28% Similarity=0.486 Sum_probs=32.2
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..|.+++|.|||+|.+|..+|+.|.+.|. +++.+|.
T Consensus 136 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr 171 (324)
T 3hg7_A 136 QGLKGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSR 171 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cccccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcC
Confidence 57899999999999999999999999997 5777665
No 447
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=88.85 E-value=0.8 Score=45.31 Aligned_cols=33 Identities=21% Similarity=0.381 Sum_probs=27.6
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+++|+|.|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 35 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDID 35 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 467888875 7999999999999996 68887764
No 448
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=88.84 E-value=0.7 Score=48.12 Aligned_cols=33 Identities=21% Similarity=0.340 Sum_probs=28.8
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+...|. +++.+|.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~ 196 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDI 196 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeC
Confidence 36799999999999999999999998 7777764
No 449
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=88.82 E-value=0.59 Score=48.58 Aligned_cols=33 Identities=27% Similarity=0.427 Sum_probs=24.7
Q ss_pred CCeEEEEcCChHHHHHHHHHH-Hc-CCCEEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQVARMLM-AW-GVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La-~~-GVg~ItlVD~ 396 (679)
..||+|||+|.+|...++.|. .. |+.-+.++|.
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~ 42 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL 42 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 358999999999999999998 43 4443445554
No 450
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=88.68 E-value=0.4 Score=50.18 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=31.5
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..|.+++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~ 173 (313)
T 2ekl_A 138 LELAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDI 173 (313)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECC
Confidence 46889999999999999999999999996 5666664
No 451
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=88.66 E-value=0.61 Score=44.13 Aligned_cols=29 Identities=34% Similarity=0.489 Sum_probs=24.4
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
++|+|.|+ |++|..+++.|+.. ++.++|.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r 30 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH---DLLLSGR 30 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS---EEEEECS
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC---CEEEEEC
Confidence 46889975 89999999999987 8888765
No 452
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=88.64 E-value=1.3 Score=43.09 Aligned_cols=29 Identities=31% Similarity=0.439 Sum_probs=23.6
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCEEEEE
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLL 394 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItlV 394 (679)
++|+|.|+ |++|.++++.|+..|. ++.++
T Consensus 2 k~vlITGasggiG~~~a~~l~~~G~-~v~~~ 31 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAEDGF-ALAIH 31 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTC-EEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEE
Confidence 57888865 7999999999999996 45554
No 453
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=88.64 E-value=0.31 Score=50.38 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=27.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.||+|||+|++|+.+|..|++.|. +++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcC
Confidence 589999999999999999999995 68887764
No 454
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=88.63 E-value=0.56 Score=48.81 Aligned_cols=33 Identities=12% Similarity=0.236 Sum_probs=28.7
Q ss_pred cCCeEEEEcCC-hHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAG-TLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaG-gLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+| ++|..++..+...|. +++.+|.
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~ 177 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTR 177 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEES
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeC
Confidence 46799999998 999999999999998 7777775
No 455
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=88.62 E-value=4.1 Score=41.58 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=27.2
Q ss_pred CeEEEEc-CChHHHHHHHHHHHcCC-CEEEEEeCC
Q 005745 365 RKCLLLG-AGTLGCQVARMLMAWGV-RKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvG-aGgLGs~VA~~La~~GV-g~ItlVD~D 397 (679)
++|+|.| .|.+|+.+++.|+..|- -+++.+|..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 5899998 59999999999999943 377887763
No 456
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=88.58 E-value=0.41 Score=51.40 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=33.0
Q ss_pred hHHhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 358 NLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 358 gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
|.+.|++++|+|+|+|.+|..+|+.|...|. ++++.|.
T Consensus 167 G~~~L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~ 204 (364)
T 1leh_A 167 GSDSLEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDV 204 (364)
T ss_dssp SSCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cccCCCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcC
Confidence 3336899999999999999999999999998 4778874
No 457
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=88.52 E-value=2.5 Score=41.69 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=29.3
Q ss_pred hhcCCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++|+|.| .||+|..+++.|++.|. ++.++|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGA-DIAIADL 39 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcC
Confidence 36788899997 57999999999999996 5777775
No 458
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=88.51 E-value=2.7 Score=40.87 Aligned_cols=87 Identities=17% Similarity=0.149 Sum_probs=60.2
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
..++++|+|+|+.|..++..|...|..-+.|+|.+.-. +.+. | +.+-+
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiDd~~~~------~~~~--------g-----------------~~Vlg- 58 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRACGETVAAIVDADPTR------RAVL--------G-----------------VPVVG- 58 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC---------CBT--------T-----------------BCEEE-
T ss_pred CCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEEeCCccc------CcCC--------C-----------------eeEEC-
Confidence 45689999999999999999999998899999976311 0010 1 22222
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhcc-CCEEEEeCCChHHHHHHHHHHHhcCCeE
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILS-HDVIFLLTDTRESRWLPTLLCANTNKIT 502 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~-~DvV~~~tDs~esR~lin~~~~~~~kp~ 502 (679)
..+.+.++.+. .+.++.+..+...|..+.+.+...+..+
T Consensus 59 ---------------------~~~~~~~~~~~~~~~v~iAIg~~~~R~~i~~~l~~~g~~~ 98 (220)
T 4ea9_A 59 ---------------------DDLALPMLREQGLSRLFVAIGDNRLRQKLGRKARDHGFSL 98 (220)
T ss_dssp ---------------------SGGGHHHHHHTTCCEEEECCCCHHHHHHHHHHHHHTTCEE
T ss_pred ---------------------CHHHHHHhhcccccEEEEecCCHHHHHHHHHHHHhcCCCc
Confidence 12334444433 4567889999999988888888887654
No 459
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=88.49 E-value=1 Score=47.52 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=25.4
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHc-CCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~-GVg~ItlVD~ 396 (679)
+..||.|||+|.+|...++.|... |+.-..++|.
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~ 38 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI 38 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC
Confidence 346899999999999999999876 3333344454
No 460
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=88.45 E-value=1 Score=45.15 Aligned_cols=31 Identities=29% Similarity=0.401 Sum_probs=26.2
Q ss_pred eEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCc
Q 005745 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGR 398 (679)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~ 398 (679)
+|+|.|+ |.+|+.+++.|+ .| -+++.+|.+.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~~ 33 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PV-GNLIALDVHS 33 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TT-SEEEEECTTC
T ss_pred eEEEECCCCHHHHHHHHHhh-cC-CeEEEecccc
Confidence 7999997 999999999999 78 5777777643
No 461
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=88.45 E-value=0.76 Score=46.55 Aligned_cols=31 Identities=35% Similarity=0.500 Sum_probs=25.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEE-EeC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITL-LDN 396 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~Itl-VD~ 396 (679)
.||+|+|+|..|..+++.+...+- .|.- +|.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~ 35 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIEN 35 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEec
Confidence 589999999999999999998875 6553 454
No 462
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=88.42 E-value=1.4 Score=43.91 Aligned_cols=87 Identities=15% Similarity=0.120 Sum_probs=54.1
Q ss_pred CCeEEEEcCChHHHHHHHH--HHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 364 SRKCLLLGAGTLGCQVARM--LMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~--La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
..+|+|+|+|.+|..++++ +...|+.=+.++|.|.= ++ |+. + -++.+.+
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~------k~-----------g~~-----------i-~gv~V~~ 135 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINES------KI-----------GTE-----------V-GGVPVYN 135 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTT------TT-----------TCE-----------E-TTEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHH------HH-----------HhH-----------h-cCCeeec
Confidence 3689999999999999995 34568888889886421 11 210 0 0122221
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEE
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITI 503 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~lin~~~~~~~kp~I 503 (679)
.+++.++++++|+|+.|+-+.... -+.+.|...|+..|
T Consensus 136 -----------------------~~dl~eli~~~D~ViIAvPs~~~~-ei~~~l~~aGi~~I 173 (215)
T 2vt3_A 136 -----------------------LDDLEQHVKDESVAILTVPAVAAQ-SITDRLVALGIKGI 173 (215)
T ss_dssp -----------------------GGGHHHHCSSCCEEEECSCHHHHH-HHHHHHHHTTCCEE
T ss_pred -----------------------hhhHHHHHHhCCEEEEecCchhHH-HHHHHHHHcCCCEE
Confidence 345777887779999999876655 45566777877644
No 463
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=88.37 E-value=0.72 Score=47.02 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=27.8
Q ss_pred hhcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
+-.+.+|||.|+ |.+|..+++.|+..|. +++.+|.+
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~ 47 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVAR 47 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCC
Confidence 335788999986 9999999999999994 77777763
No 464
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=88.35 E-value=0.58 Score=49.41 Aligned_cols=33 Identities=24% Similarity=0.504 Sum_probs=29.1
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+..+|. +++.+|.
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~ 219 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVIST 219 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 57899999999999999999999998 6777764
No 465
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=88.32 E-value=1.5 Score=45.72 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=27.2
Q ss_pred eEEEEc-CChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 366 KCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 366 kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
||+|.| .|.+|..+++.|+..|.-+++.+|.+
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~ 34 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ 34 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 799999 69999999999999997567766654
No 466
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=88.30 E-value=1.1 Score=46.59 Aligned_cols=88 Identities=11% Similarity=0.180 Sum_probs=55.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCC---EEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVR---KITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg---~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~ 441 (679)
.||.|||+|.+|...++.|...+-. -+.++|. ...|++.+++...- | ..
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~----------------------~~~~a~~~a~~~~~--~----~~ 54 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR----------------------DLSRAKEFAQKHDI--P----KA 54 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS----------------------SHHHHHHHHHHHTC--S----CE
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC----------------------CHHHHHHHHHHcCC--C----cc
Confidence 4899999999999999998766422 2233332 23355555544310 0 01
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 442 ~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
..+.+++++ +.|+|+.|+-+. ...-+...|.+.||+++.
T Consensus 55 -----------------------~~~~~~ll~~~~vD~V~i~tp~~-~H~~~~~~al~~GkhVl~ 95 (334)
T 3ohs_X 55 -----------------------YGSYEELAKDPNVEVAYVGTQHP-QHKAAVMLCLAAGKAVLC 95 (334)
T ss_dssp -----------------------ESSHHHHHHCTTCCEEEECCCGG-GHHHHHHHHHHTTCEEEE
T ss_pred -----------------------cCCHHHHhcCCCCCEEEECCCcH-HHHHHHHHHHhcCCEEEE
Confidence 223455555 689999988764 455556677888888775
No 467
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=88.27 E-value=0.44 Score=49.58 Aligned_cols=36 Identities=19% Similarity=0.478 Sum_probs=31.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVA 400 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve 400 (679)
...|+|||+|-.|+.+|..|++.|.. ++++|.+.+.
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~-V~lle~~~~~ 40 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEE-VTVIEKRFIG 40 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCC-EEEECSSSTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCe-EEEEeCCCCC
Confidence 46899999999999999999999974 9999987543
No 468
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=88.26 E-value=1.7 Score=47.97 Aligned_cols=40 Identities=15% Similarity=-0.007 Sum_probs=31.7
Q ss_pred hhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEEE
Q 005745 466 RRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (679)
Q Consensus 466 ~~l~~li~--~~DvV~~~tDs~esR~lin~~~~~~~kp~I~a 505 (679)
.+.+++++ +.|+|+.||-+.+.-.-+...|.++||.++..
T Consensus 97 ~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~ 138 (446)
T 3upl_A 97 DDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMM 138 (446)
T ss_dssp SCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEec
Confidence 34556665 58999999988877677788899999999863
No 469
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.21 E-value=0.38 Score=47.93 Aligned_cols=34 Identities=15% Similarity=0.259 Sum_probs=30.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC---CEEEEEeCC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGV---RKITLLDNG 397 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV---g~ItlVD~D 397 (679)
..||.|||+|.+|+.+++.|++.|+ .+++++|.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCC
Confidence 3589999999999999999999995 678998864
No 470
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=88.21 E-value=1.6 Score=45.27 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=28.4
Q ss_pred CeEEEEcCC-hHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGAG-TLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaG-gLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.||.|||+| .+|...++.|...|+.-+.++|.+
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~ 37 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPA 37 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSS
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCC
Confidence 689999995 599999999999998777788765
No 471
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=88.18 E-value=0.32 Score=49.90 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=29.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
.||+|||+|++|+.+|..|++.|. +++++|.+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~-~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLP-HTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCT-TCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEec
Confidence 589999999999999999999995 78999876
No 472
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=88.15 E-value=1 Score=47.25 Aligned_cols=92 Identities=12% Similarity=0.031 Sum_probs=54.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc-CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~-GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~ 442 (679)
..||.|||+|.+|...++.|... ++.-+.++|. ...|++.+++... +.+.+ ..
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~----------------------~~~~~~~~a~~~~-~~~~~--~~- 59 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASR----------------------SLEKAKAFATANN-YPEST--KI- 59 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS----------------------SHHHHHHHHHHTT-CCTTC--EE-
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC----------------------CHHHHHHHHHHhC-CCCCC--ee-
Confidence 35899999999999999999875 3333345453 1224443333221 00011 11
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 443 ~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
....+++++ +.|+|+.|+-+.. ..-+...|.+.||+++.
T Consensus 60 ----------------------~~~~~~ll~~~~~D~V~i~tp~~~-h~~~~~~al~aGk~V~~ 100 (362)
T 1ydw_A 60 ----------------------HGSYESLLEDPEIDALYVPLPTSL-HVEWAIKAAEKGKHILL 100 (362)
T ss_dssp ----------------------ESSHHHHHHCTTCCEEEECCCGGG-HHHHHHHHHTTTCEEEE
T ss_pred ----------------------eCCHHHHhcCCCCCEEEEcCChHH-HHHHHHHHHHCCCeEEE
Confidence 123455554 5899999987644 33445567788887775
No 473
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=88.04 E-value=2.6 Score=46.69 Aligned_cols=35 Identities=29% Similarity=0.419 Sum_probs=27.9
Q ss_pred cCCeEEEEcCChH-HHHHHHHHHHc--CC--CEEEEEeCC
Q 005745 363 SSRKCLLLGAGTL-GCQVARMLMAW--GV--RKITLLDNG 397 (679)
Q Consensus 363 ~~~kVlIvGaGgL-Gs~VA~~La~~--GV--g~ItlVD~D 397 (679)
+..||.|||+|+. |..+|..|+.. +. .+|.|+|.+
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~ 66 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDND 66 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCC
Confidence 3569999999998 66678888887 55 579999873
No 474
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=87.93 E-value=0.83 Score=48.47 Aligned_cols=34 Identities=18% Similarity=0.388 Sum_probs=29.9
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+.+|+|+|+|++|..++..+..+|..+++.+|.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 228 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAG 228 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEES
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcC
Confidence 3679999999999999999999999778888774
No 475
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=87.89 E-value=1.5 Score=46.04 Aligned_cols=32 Identities=31% Similarity=0.454 Sum_probs=27.6
Q ss_pred eEEEEc-CChHHHHHHHHHHHc-CC-CEEEEEeCC
Q 005745 366 KCLLLG-AGTLGCQVARMLMAW-GV-RKITLLDNG 397 (679)
Q Consensus 366 kVlIvG-aGgLGs~VA~~La~~-GV-g~ItlVD~D 397 (679)
||.|+| +|.+|..+|..|+.- +. .+|.|+|-+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~ 36 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIA 36 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecC
Confidence 799999 899999999999876 54 689998873
No 476
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=87.72 E-value=0.41 Score=50.52 Aligned_cols=36 Identities=33% Similarity=0.596 Sum_probs=32.0
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..|.+++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~ 177 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSR 177 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECS
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECC
Confidence 46899999999999999999999999996 6777775
No 477
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=87.72 E-value=1.3 Score=43.83 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=24.8
Q ss_pred CeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 365 RKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
++++|.| .||+|.++|+.|+..|. ++.++|.
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 32 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGR 32 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 3577776 58999999999999995 5777664
No 478
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.71 E-value=0.48 Score=51.30 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=32.4
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+...+|+|+|+|.+|..+++.+.+.|. +++++|.
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~ 203 (401)
T 1x13_A 169 KVPPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDT 203 (401)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 4789999999999999999999999998 7999886
No 479
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=87.69 E-value=1.5 Score=45.56 Aligned_cols=34 Identities=9% Similarity=0.167 Sum_probs=25.9
Q ss_pred cCCeEEEEcCChHHH-HHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGC-QVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs-~VA~~La~~GVg~ItlVD~ 396 (679)
+..||.|||+|..|. ..+..|...|+.-..++|.
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~ 37 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFES 37 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECS
T ss_pred CccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCC
Confidence 346899999999996 5778887777765677775
No 480
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=87.64 E-value=0.7 Score=48.16 Aligned_cols=92 Identities=8% Similarity=-0.079 Sum_probs=57.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEEEEEec
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v~~~~~ 444 (679)
.||.|||+|+.|...++.| .-|+.=..++|.+. ..+++.+++..++..... ..+
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~---------------------~~~~~~~~~~~~~~~~~~--~~~-- 56 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVP---------------------EEDLSKLEKAISEMNIKP--KKY-- 56 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSST---------------------TCCCHHHHHHHHTTTCCC--EEC--
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCc---------------------hhhHHHHHHHHHHcCCCC--ccc--
Confidence 4899999999998877777 44444444555421 023445555555533211 222
Q ss_pred ccCCCCCCCCCccccccccChhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 445 AIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 445 ~Ipm~gh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
.+.+++++ +.|+|+.||-+ ....-+...|.+.||.++.
T Consensus 57 ---------------------~~~~~ll~~~~vD~V~I~tp~-~~H~~~~~~al~aGkhVl~ 96 (337)
T 3ip3_A 57 ---------------------NNWWEMLEKEKPDILVINTVF-SLNGKILLEALERKIHAFV 96 (337)
T ss_dssp ---------------------SSHHHHHHHHCCSEEEECSSH-HHHHHHHHHHHHTTCEEEE
T ss_pred ---------------------CCHHHHhcCCCCCEEEEeCCc-chHHHHHHHHHHCCCcEEE
Confidence 23344554 58999999865 4566677788889998775
No 481
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=87.61 E-value=0.46 Score=49.33 Aligned_cols=36 Identities=19% Similarity=0.447 Sum_probs=31.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCccC
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVA 400 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~Ve 400 (679)
...|+|||+|..|+.+|..|++.|. +++++|.+.+.
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~-~V~llE~~~~~ 52 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENK-NTALFESGTMG 52 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCC-cEEEEeCCCCC
Confidence 4589999999999999999999997 79999987543
No 482
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=87.53 E-value=0.58 Score=49.67 Aligned_cols=35 Identities=34% Similarity=0.445 Sum_probs=31.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCc
Q 005745 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~ 398 (679)
..+|+|||+|-.|..+|..|++.|+.+++|+|...
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 46899999999999999999999998799999754
No 483
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=87.49 E-value=0.37 Score=53.90 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=27.3
Q ss_pred hhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++++++|+|+||+|..+++.|+..|+ ++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~G~-~V~i~~R 395 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEKGA-KVVIANR 395 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHHCC--CEEEES
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 3677899999999999999999999998 7888765
No 484
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=87.49 E-value=1.4 Score=43.61 Aligned_cols=31 Identities=26% Similarity=0.415 Sum_probs=26.6
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
++|+|.|+ |++|+.+++.|+..| -+++++|.
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSDI 34 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTE-EEEEECCS
T ss_pred ceEEEECCCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 47999998 999999999999998 46777665
No 485
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=87.45 E-value=0.57 Score=49.52 Aligned_cols=38 Identities=21% Similarity=0.297 Sum_probs=31.3
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCc
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~ 398 (679)
+..+..+|+|||+|-.|+.+|..|++.|+ +++|+|.+.
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~E~~~ 56 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGI-DCDVYEAVK 56 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 44556799999999999999999999998 699999864
No 486
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=87.44 E-value=0.63 Score=48.62 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=28.1
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCC
Q 005745 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (679)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D 397 (679)
++|+|.|+ |.+|+.+++.|+..|. +++++|..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR 61 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC
Confidence 68999997 9999999999999994 78888764
No 487
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=87.36 E-value=1.8 Score=44.54 Aligned_cols=33 Identities=12% Similarity=0.012 Sum_probs=24.2
Q ss_pred CCeEEEEcCChHHHH-HHHHHHHc-CCCEEEEEeC
Q 005745 364 SRKCLLLGAGTLGCQ-VARMLMAW-GVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~-VA~~La~~-GVg~ItlVD~ 396 (679)
..||+|||+|.+|.. +++.|... |+.-+.++|.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~ 39 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSP 39 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECS
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECC
Confidence 458999999999996 88888764 4433336564
No 488
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=87.36 E-value=1.6 Score=46.20 Aligned_cols=32 Identities=19% Similarity=0.064 Sum_probs=25.4
Q ss_pred cCCEEEEeCCChHHHHHHHHHHHhcCCeEEEE
Q 005745 474 SHDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (679)
Q Consensus 474 ~~DvV~~~tDs~esR~lin~~~~~~~kp~I~a 505 (679)
+.|+|++||.+.+.-......|.++||.++.+
T Consensus 66 ~iDvVve~t~~~~~a~~~~~~AL~aGKhVVta 97 (332)
T 2ejw_A 66 EADLVVEAMGGVEAPLRLVLPALEAGIPLITA 97 (332)
T ss_dssp TCSEEEECCCCSHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHcCCeEEEC
Confidence 78999999998765554556678899998884
No 489
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=87.30 E-value=0.46 Score=50.85 Aligned_cols=37 Identities=19% Similarity=0.382 Sum_probs=32.8
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..|.+++|.|||+|.+|..+|+.|.+.|..++..+|.
T Consensus 160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~ 196 (364)
T 2j6i_A 160 YDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDY 196 (364)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECS
T ss_pred ccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 3689999999999999999999999999876777764
No 490
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=87.28 E-value=0.54 Score=48.92 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=28.2
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..++|.|||+|..|+.+|.+|+ .|. .++++|.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~ 42 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDV 42 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECS
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEEC
Confidence 4789999999999999999999 997 6888775
No 491
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=87.26 E-value=0.52 Score=47.96 Aligned_cols=33 Identities=30% Similarity=0.496 Sum_probs=30.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCEEEEEeCCc
Q 005745 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (679)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~D~ 398 (679)
..|+|||+|-.|+.+|..|++.|+ +++++|...
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~-~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCC-cEEEEECCC
Confidence 579999999999999999999998 789999763
No 492
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=87.19 E-value=1.7 Score=43.95 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=26.4
Q ss_pred cCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
.+++|+|.|+ |.+|+.+++.|+..|. ++++++.
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~v~~~~r 35 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRT 35 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTT-EEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEec
Confidence 3468999995 9999999999999986 4555554
No 493
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=87.19 E-value=0.62 Score=51.66 Aligned_cols=35 Identities=26% Similarity=0.485 Sum_probs=31.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHH---cCCCEEEEEeCCcc
Q 005745 364 SRKCLLLGAGTLGCQVARMLMA---WGVRKITLLDNGRV 399 (679)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~---~GVg~ItlVD~D~V 399 (679)
..+|+|||+|..|+.+|..|++ .|+ +++|+|.+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~-~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQA-NITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSC-EEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCC-EEEEECCCCC
Confidence 4689999999999999999999 997 7999998754
No 494
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=87.15 E-value=1.3 Score=42.83 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=26.5
Q ss_pred CCeEEEEc-CChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
+++|+|.| .|++|.++++.|+..|. ++.++|.
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r 37 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMAR 37 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 56788886 57999999999999996 5777765
No 495
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.11 E-value=0.59 Score=48.73 Aligned_cols=36 Identities=33% Similarity=0.483 Sum_probs=31.6
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..|.+++|.|||+|.+|..+|+.|.+.|. ++..+|.
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~ 173 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGM-NILLYDP 173 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCC-EEEEECC
Confidence 46899999999999999999999999995 5666665
No 496
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=87.02 E-value=1.8 Score=44.84 Aligned_cols=35 Identities=6% Similarity=0.008 Sum_probs=26.0
Q ss_pred cCCeEEEEcCChHHHHHHHHHHHcC-CCEEEEEeCC
Q 005745 363 SSRKCLLLGAGTLGCQVARMLMAWG-VRKITLLDNG 397 (679)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~G-Vg~ItlVD~D 397 (679)
+..||.|||+|.+|...++.|...+ +.-..++|.+
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~ 39 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRT 39 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSC
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCC
Confidence 3468999999999999999998875 3333455653
No 497
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=87.02 E-value=0.61 Score=49.21 Aligned_cols=36 Identities=17% Similarity=0.357 Sum_probs=31.4
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..|.+++|.|||+|.+|..+|+.|.+.|. ++..+|.
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~ 177 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDI 177 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECC
Confidence 46899999999999999999999999996 5666664
No 498
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=87.01 E-value=1.7 Score=45.37 Aligned_cols=90 Identities=11% Similarity=-0.049 Sum_probs=57.4
Q ss_pred cCCeEEEEcCC-hHHHHHHHHHHHc--CCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCCCcEE
Q 005745 363 SSRKCLLLGAG-TLGCQVARMLMAW--GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (679)
Q Consensus 363 ~~~kVlIvGaG-gLGs~VA~~La~~--GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP~v~v 439 (679)
+..||.|||+| ..|...++.|... ++.-..++|. ...|++.+++... ..
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~----------------------~~~~~~~~a~~~~----~~-- 68 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR----------------------TRSHAEEFAKMVG----NP-- 68 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS----------------------SHHHHHHHHHHHS----SC--
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC----------------------CHHHHHHHHHHhC----CC--
Confidence 44689999999 7999999999876 3333345554 2335555554432 11
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005745 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (679)
Q Consensus 440 ~~~~~~Ipm~gh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~lin~~~~~~~kp~I~ 504 (679)
..+ .+.+++++ +.|+|+.||-+ ....-+...|.+.||+++.
T Consensus 69 ~~~-----------------------~~~~~ll~~~~vD~V~i~tp~-~~H~~~~~~al~aGkhVl~ 111 (340)
T 1zh8_A 69 AVF-----------------------DSYEELLESGLVDAVDLTLPV-ELNLPFIEKALRKGVHVIC 111 (340)
T ss_dssp EEE-----------------------SCHHHHHHSSCCSEEEECCCG-GGHHHHHHHHHHTTCEEEE
T ss_pred ccc-----------------------CCHHHHhcCCCCCEEEEeCCc-hHHHHHHHHHHHCCCcEEE
Confidence 111 23455554 58999999865 4445566677888888775
No 499
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=86.98 E-value=0.61 Score=48.77 Aligned_cols=36 Identities=25% Similarity=0.374 Sum_probs=31.9
Q ss_pred HhhcCCeEEEEcCChHHHHHHHHHHHcCCCEEEEEeC
Q 005745 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (679)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItlVD~ 396 (679)
..+.+++|.|||+|.+|..+|+.|...|. ++..+|.
T Consensus 140 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~ 175 (311)
T 2cuk_A 140 LDLQGLTLGLVGMGRIGQAVAKRALAFGM-RVVYHAR 175 (311)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHCCC-EEEEECC
Confidence 46889999999999999999999999996 6777765
No 500
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=86.93 E-value=1.7 Score=45.13 Aligned_cols=60 Identities=25% Similarity=0.242 Sum_probs=40.0
Q ss_pred hcCCeEEEEcC-ChHHHHHHHHHHHcCCCEEEEEeCCccCccCCCcCccCCcccccCCCCcHHHHHHHHHHhhCC
Q 005745 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFP 435 (679)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItlVD~D~Ve~sNl~RQ~L~~~~Dv~~~Gk~KAeaaae~L~~inP 435 (679)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.-. .-..| ...|++.+++.+.+..+
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~-~~~~R------------~~~~~~~~~~~l~~~~~ 67 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDF-KGVGK------------GSSAADKVVEEIRRRGG 67 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCT-TSCBC------------CSHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCccc-ccccC------------CHHHHHHHHHHHHhhCC
Confidence 56788888875 7999999999999996 67777753210 00111 23466677777766543
Done!