Query 005746
Match_columns 679
No_of_seqs 190 out of 2648
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 06:19:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005746.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005746hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 100.0 1.8E-30 6.3E-35 258.1 26.8 298 242-667 2-372 (439)
2 2x6q_A Trehalose-synthase TRET 100.0 8.2E-31 2.8E-35 263.7 21.2 300 233-667 31-357 (416)
3 3okp_A GDP-mannose-dependent a 100.0 6.4E-30 2.2E-34 251.4 26.0 290 240-667 2-321 (394)
4 3c48_A Predicted glycosyltrans 100.0 4.3E-29 1.5E-33 251.5 30.1 298 242-667 20-367 (438)
5 2jjm_A Glycosyl transferase, g 100.0 8.4E-29 2.9E-33 247.4 24.9 287 242-667 15-326 (394)
6 1rzu_A Glycogen synthase 1; gl 100.0 6.3E-29 2.1E-33 255.4 22.0 308 243-667 1-407 (485)
7 2r60_A Glycosyl transferase, g 100.0 1.4E-28 4.9E-33 254.8 23.6 298 243-667 8-400 (499)
8 2iw1_A Lipopolysaccharide core 100.0 2.7E-28 9.2E-33 238.9 23.0 284 243-664 1-309 (374)
9 2qzs_A Glycogen synthase; glyc 100.0 1.9E-28 6.5E-33 251.8 22.8 307 243-667 1-408 (485)
10 3oy2_A Glycosyltransferase B73 100.0 1.8E-28 6E-33 245.9 20.2 282 243-666 1-314 (413)
11 2iuy_A Avigt4, glycosyltransfe 99.9 1.1E-26 3.8E-31 227.8 16.1 255 240-666 1-282 (342)
12 3vue_A GBSS-I, granule-bound s 99.9 4.2E-25 1.4E-29 239.0 25.1 199 356-667 236-443 (536)
13 2gek_A Phosphatidylinositol ma 99.9 4E-25 1.4E-29 218.8 19.8 278 242-666 20-324 (406)
14 2x0d_A WSAF; GT4 family, trans 99.9 2.5E-23 8.4E-28 217.1 23.9 276 242-666 46-354 (413)
15 3s28_A Sucrose synthase 1; gly 99.9 7E-24 2.4E-28 241.7 17.6 343 205-667 237-706 (816)
16 2vsy_A XCC0866; transferase, g 99.9 2.5E-23 8.5E-28 218.5 12.1 273 242-665 205-506 (568)
17 1f0k_A MURG, UDP-N-acetylgluco 99.9 6E-21 2.1E-25 187.8 25.1 255 243-661 7-286 (364)
18 1vgv_A UDP-N-acetylglucosamine 99.8 2.9E-19 9.9E-24 177.1 19.7 284 243-664 1-317 (384)
19 2hy7_A Glucuronosyltransferase 99.8 4.7E-19 1.6E-23 182.9 19.6 57 599-657 258-323 (406)
20 2bfw_A GLGA glycogen synthase; 99.8 7.4E-19 2.5E-23 159.9 12.9 125 430-664 24-154 (200)
21 3beo_A UDP-N-acetylglucosamine 99.8 1.5E-18 5.3E-23 170.9 15.5 280 242-667 8-320 (375)
22 2xci_A KDO-transferase, 3-deox 99.8 3.4E-18 1.2E-22 175.3 17.7 257 247-662 43-316 (374)
23 1uqt_A Alpha, alpha-trehalose- 99.8 5.1E-17 1.7E-21 174.8 23.1 240 311-667 123-398 (482)
24 1v4v_A UDP-N-acetylglucosamine 99.7 6E-17 2E-21 160.9 15.8 269 243-662 6-307 (376)
25 3qhp_A Type 1 capsular polysac 99.7 3.4E-17 1.2E-21 145.3 11.1 71 593-668 45-119 (166)
26 2f9f_A First mannosyl transfer 99.7 3.6E-17 1.2E-21 149.2 7.6 65 601-667 73-139 (177)
27 3nb0_A Glycogen [starch] synth 99.7 1.1E-15 3.9E-20 172.3 18.8 62 600-663 480-556 (725)
28 3t5t_A Putative glycosyltransf 99.6 1.5E-15 5.2E-20 165.4 13.1 185 359-664 205-413 (496)
29 3dzc_A UDP-N-acetylglucosamine 99.4 1.3E-11 4.4E-16 128.1 23.3 288 242-667 25-345 (396)
30 3otg_A CALG1; calicheamicin, T 99.3 3.9E-11 1.3E-15 120.4 18.8 49 603-658 289-337 (412)
31 3ot5_A UDP-N-acetylglucosamine 99.1 1E-09 3.5E-14 114.5 18.3 62 591-662 270-334 (403)
32 3s2u_A UDP-N-acetylglucosamine 99.1 1.2E-09 4.1E-14 111.8 17.9 50 604-659 233-282 (365)
33 2iyf_A OLED, oleandomycin glyc 99.0 1.1E-08 3.8E-13 104.0 19.5 50 603-659 280-329 (430)
34 4fzr_A SSFS6; structural genom 99.0 3.2E-09 1.1E-13 107.1 14.1 49 603-658 281-329 (398)
35 3oti_A CALG3; calicheamicin, T 98.9 1.9E-08 6.6E-13 101.7 17.4 48 603-657 280-327 (398)
36 3tsa_A SPNG, NDP-rhamnosyltran 98.9 7.8E-09 2.7E-13 103.5 13.6 48 603-657 267-314 (391)
37 3ia7_A CALG4; glycosysltransfe 98.8 2.9E-07 9.8E-12 91.6 20.3 47 604-657 279-325 (402)
38 2p6p_A Glycosyl transferase; X 98.7 1.3E-06 4.3E-11 87.6 19.5 47 604-658 262-308 (384)
39 3rsc_A CALG2; TDP, enediyne, s 98.6 6E-06 2.1E-10 83.3 24.1 48 603-657 294-341 (415)
40 3rhz_A GTF3, nucleotide sugar 98.6 1.6E-06 5.5E-11 89.6 19.6 59 604-663 213-278 (339)
41 4hwg_A UDP-N-acetylglucosamine 98.6 3.7E-07 1.3E-11 95.4 14.6 47 605-658 262-310 (385)
42 3q3e_A HMW1C-like glycosyltran 98.4 6.8E-07 2.3E-11 100.5 10.8 61 594-658 488-550 (631)
43 4amg_A Snogd; transferase, pol 98.2 0.00012 4E-09 73.2 20.0 50 602-658 284-333 (400)
44 3h4t_A Glycosyltransferase GTF 98.2 9.8E-05 3.4E-09 75.8 19.8 49 603-658 265-313 (404)
45 2o6l_A UDP-glucuronosyltransfe 97.9 2.1E-05 7.2E-10 70.9 8.0 49 603-658 65-115 (170)
46 2c4m_A Glycogen phosphorylase; 97.5 0.0016 5.4E-08 75.3 16.6 57 602-658 589-649 (796)
47 1l5w_A Maltodextrin phosphoryl 97.3 0.0035 1.2E-07 72.5 15.8 58 602-659 599-660 (796)
48 2gj4_A Glycogen phosphorylase, 97.2 0.0062 2.1E-07 70.7 16.9 56 603-658 624-683 (824)
49 2yjn_A ERYCIII, glycosyltransf 97.2 0.00057 1.9E-08 70.5 7.5 49 603-658 316-364 (441)
50 2iya_A OLEI, oleandomycin glyc 96.9 0.0049 1.7E-07 62.8 11.0 49 603-658 302-350 (424)
51 4gyw_A UDP-N-acetylglucosamine 96.4 0.0084 2.9E-07 67.8 9.9 63 591-656 564-629 (723)
52 3hbm_A UDP-sugar hydrolase; PS 96.4 0.0042 1.4E-07 63.1 6.7 96 538-657 157-252 (282)
53 1psw_A ADP-heptose LPS heptosy 96.1 0.031 1.1E-06 55.4 10.9 42 607-655 243-286 (348)
54 1iir_A Glycosyltransferase GTF 95.0 0.023 7.8E-07 58.1 5.4 49 603-658 282-330 (415)
55 1rrv_A Glycosyltransferase GTF 94.6 0.032 1.1E-06 56.9 5.5 49 603-658 283-331 (416)
56 3tov_A Glycosyl transferase fa 93.1 0.88 3E-05 46.5 12.7 56 593-656 230-287 (349)
57 2jzc_A UDP-N-acetylglucosamine 86.2 0.57 1.9E-05 46.4 4.3 46 607-658 115-161 (224)
58 2gt1_A Lipopolysaccharide hept 81.5 4.9 0.00017 39.6 8.8 54 592-655 223-278 (326)
59 2iya_A OLEI, oleandomycin glyc 76.8 4 0.00014 41.5 6.6 54 242-300 12-65 (424)
60 1ygp_A Yeast glycogen phosphor 75.3 37 0.0013 40.2 14.7 77 582-658 654-742 (879)
61 3eag_A UDP-N-acetylmuramate:L- 71.8 8.2 0.00028 39.1 7.4 71 243-321 5-76 (326)
62 2bw0_A 10-FTHFDH, 10-formyltet 70.7 8.6 0.00029 39.9 7.4 73 239-318 19-106 (329)
63 1iir_A Glycosyltransferase GTF 69.8 6.6 0.00023 40.0 6.3 52 243-299 1-52 (415)
64 2yjn_A ERYCIII, glycosyltransf 66.9 5.8 0.0002 40.7 5.2 54 242-300 20-73 (441)
65 1rrv_A Glycosyltransferase GTF 64.5 5.8 0.0002 40.3 4.6 52 243-299 1-52 (416)
66 3e8x_A Putative NAD-dependent 63.8 27 0.00091 32.5 8.7 59 260-320 33-93 (236)
67 3hn7_A UDP-N-acetylmuramate-L- 63.4 12 0.00042 40.6 7.2 71 243-321 20-90 (524)
68 2c1x_A UDP-glucose flavonoid 3 60.3 7.7 0.00026 41.1 4.7 46 605-657 324-371 (456)
69 3dfz_A SIRC, precorrin-2 dehyd 54.0 17 0.00058 35.9 5.7 83 228-320 15-100 (223)
70 2acv_A Triterpene UDP-glucosyl 53.1 13 0.00046 39.3 5.1 45 606-657 332-378 (463)
71 4hv4_A UDP-N-acetylmuramate--L 52.9 19 0.00065 38.8 6.3 65 252-322 28-92 (494)
72 3h2s_A Putative NADH-flavin re 52.9 23 0.00079 32.3 6.1 59 260-320 12-71 (224)
73 3ius_A Uncharacterized conserv 51.2 21 0.0007 34.0 5.6 52 262-318 18-70 (286)
74 2pq6_A UDP-glucuronosyl/UDP-gl 50.2 15 0.00051 38.9 5.0 47 605-658 352-400 (482)
75 3lk7_A UDP-N-acetylmuramoylala 48.7 26 0.00089 37.1 6.5 71 242-321 9-82 (451)
76 1jx7_A Hypothetical protein YC 46.9 35 0.0012 28.7 5.9 39 243-281 2-43 (117)
77 3ew7_A LMO0794 protein; Q8Y8U8 45.7 44 0.0015 30.1 6.7 57 260-319 12-69 (221)
78 3uuw_A Putative oxidoreductase 43.9 25 0.00084 34.7 5.1 52 595-655 45-96 (308)
79 2l2q_A PTS system, cellobiose- 42.8 83 0.0028 27.2 7.7 73 581-656 11-83 (109)
80 4had_A Probable oxidoreductase 42.6 20 0.00069 35.9 4.3 53 594-654 61-115 (350)
81 4dzz_A Plasmid partitioning pr 42.3 43 0.0015 30.1 6.1 58 243-300 1-60 (206)
82 3mz0_A Inositol 2-dehydrogenas 42.2 38 0.0013 34.0 6.3 86 553-654 8-95 (344)
83 3l4e_A Uncharacterized peptida 41.5 59 0.002 31.4 7.2 66 588-659 43-123 (206)
84 3hbf_A Flavonoid 3-O-glucosylt 41.2 28 0.00096 37.4 5.4 48 605-657 326-373 (454)
85 3v8b_A Putative dehydrogenase, 40.0 20 0.00069 35.1 3.8 49 226-279 8-59 (283)
86 1zh8_A Oxidoreductase; TM0312, 39.8 27 0.00093 35.2 4.8 85 553-654 24-111 (340)
87 3e9m_A Oxidoreductase, GFO/IDH 38.6 55 0.0019 32.8 6.7 53 595-655 43-97 (330)
88 2pq6_A UDP-glucuronosyl/UDP-gl 37.7 31 0.001 36.5 5.0 37 243-281 9-45 (482)
89 3k9g_A PF-32 protein; ssgcid, 37.5 39 0.0013 32.3 5.2 45 242-287 26-70 (267)
90 1pjq_A CYSG, siroheme synthase 37.3 70 0.0024 34.2 7.7 69 242-320 12-81 (457)
91 4fbl_A LIPS lipolytic enzyme; 36.9 25 0.00085 33.5 3.7 38 243-282 51-88 (281)
92 3q0i_A Methionyl-tRNA formyltr 36.7 64 0.0022 33.4 7.0 71 241-318 6-92 (318)
93 3moi_A Probable dehydrogenase; 36.3 34 0.0012 35.1 4.9 52 595-655 41-94 (387)
94 3tqq_A Methionyl-tRNA formyltr 35.7 52 0.0018 34.0 6.1 71 241-318 1-87 (314)
95 3klj_A NAD(FAD)-dependent dehy 35.6 38 0.0013 34.9 5.1 71 242-319 146-227 (385)
96 3ohs_X Trans-1,2-dihydrobenzen 34.7 47 0.0016 33.2 5.5 53 595-655 42-96 (334)
97 4e3z_A Putative oxidoreductase 34.4 46 0.0016 31.9 5.2 35 239-278 22-56 (272)
98 1j6u_A UDP-N-acetylmuramate-al 34.1 38 0.0013 36.1 5.0 64 252-321 18-81 (469)
99 2qjw_A Uncharacterized protein 33.9 38 0.0013 28.8 4.1 37 242-278 3-39 (176)
100 3b6i_A Flavoprotein WRBA; flav 33.2 1.7E+02 0.0059 26.3 8.6 73 243-320 2-77 (198)
101 3gem_A Short chain dehydrogena 33.0 72 0.0024 30.8 6.3 73 242-320 26-108 (260)
102 3ezy_A Dehydrogenase; structur 32.3 58 0.002 32.7 5.7 54 595-656 40-95 (344)
103 2hy5_A Putative sulfurtransfer 31.8 88 0.003 27.5 6.2 41 243-284 1-43 (130)
104 3sju_A Keto reductase; short-c 31.7 34 0.0012 33.3 3.9 37 238-279 19-55 (279)
105 2glx_A 1,5-anhydro-D-fructose 31.7 53 0.0018 32.4 5.3 52 595-654 38-91 (332)
106 4b4o_A Epimerase family protei 31.7 45 0.0015 32.1 4.6 22 258-279 10-31 (298)
107 3i6i_A Putative leucoanthocyan 31.6 39 0.0013 33.4 4.3 61 260-320 22-92 (346)
108 1tvm_A PTS system, galactitol- 31.5 78 0.0027 27.7 5.7 67 569-638 17-83 (113)
109 3cea_A MYO-inositol 2-dehydrog 31.1 53 0.0018 32.6 5.2 52 595-654 47-100 (346)
110 3oqb_A Oxidoreductase; structu 30.9 66 0.0023 32.7 5.9 52 595-654 59-112 (383)
111 4f3y_A DHPR, dihydrodipicolina 30.6 26 0.0009 35.4 2.9 47 614-662 64-110 (272)
112 2d1p_A TUSD, hypothetical UPF0 30.3 94 0.0032 28.4 6.3 43 241-284 11-55 (140)
113 3end_A Light-independent proto 30.1 1.3E+02 0.0044 29.4 7.7 48 242-290 40-87 (307)
114 2r8r_A Sensor protein; KDPD, P 29.9 93 0.0032 31.1 6.6 42 244-285 6-47 (228)
115 2x5o_A UDP-N-acetylmuramoylala 29.9 88 0.003 32.9 6.8 70 242-321 5-74 (439)
116 3pfb_A Cinnamoyl esterase; alp 29.8 65 0.0022 29.1 5.1 39 243-281 46-84 (270)
117 3q2i_A Dehydrogenase; rossmann 29.8 51 0.0017 33.2 4.8 85 553-655 19-105 (354)
118 3tfo_A Putative 3-oxoacyl-(acy 29.7 61 0.0021 31.6 5.3 73 242-319 3-89 (264)
119 1e2b_A Enzyme IIB-cellobiose; 29.3 48 0.0017 28.9 4.0 50 581-632 10-59 (106)
120 2q2v_A Beta-D-hydroxybutyrate 29.2 79 0.0027 30.0 5.8 20 260-279 16-35 (255)
121 3ko8_A NAD-dependent epimerase 29.1 1.7E+02 0.0057 28.0 8.1 58 260-319 12-70 (312)
122 3v5n_A Oxidoreductase; structu 28.9 67 0.0023 33.5 5.7 55 594-654 78-139 (417)
123 1ydw_A AX110P-like protein; st 28.7 80 0.0027 31.9 6.1 56 595-655 44-101 (362)
124 1p3d_A UDP-N-acetylmuramate--a 28.7 88 0.003 33.2 6.7 69 243-321 19-87 (475)
125 2f62_A Nucleoside 2-deoxyribos 28.7 1.3E+02 0.0045 28.2 7.2 65 588-657 26-106 (161)
126 3ctm_A Carbonyl reductase; alc 28.6 1.2E+02 0.004 28.9 7.0 33 242-279 33-65 (279)
127 4hkt_A Inositol 2-dehydrogenas 28.5 64 0.0022 32.1 5.3 51 595-655 41-93 (331)
128 3osu_A 3-oxoacyl-[acyl-carrier 28.3 62 0.0021 30.6 4.9 32 243-279 4-35 (246)
129 2x4g_A Nucleoside-diphosphate- 28.2 2.5E+02 0.0085 27.1 9.3 58 260-319 25-85 (342)
130 1fy2_A Aspartyl dipeptidase; s 28.1 1.3E+02 0.0045 29.1 7.3 67 587-659 46-123 (229)
131 3dty_A Oxidoreductase, GFO/IDH 27.9 71 0.0024 32.9 5.6 55 594-654 53-114 (398)
132 1qgu_B Protein (nitrogenase mo 27.8 1E+02 0.0034 33.8 7.1 80 234-320 352-443 (519)
133 3f67_A Putative dienelactone h 27.8 63 0.0021 28.7 4.6 36 243-280 32-67 (241)
134 2f00_A UDP-N-acetylmuramate--L 27.7 89 0.003 33.4 6.5 69 243-321 20-88 (491)
135 3db2_A Putative NADPH-dependen 27.5 95 0.0033 31.2 6.4 85 553-656 11-97 (354)
136 3ec7_A Putative dehydrogenase; 27.4 84 0.0029 31.9 6.0 87 553-655 29-117 (357)
137 3icc_A Putative 3-oxoacyl-(acy 26.8 70 0.0024 29.9 4.9 54 240-298 4-60 (255)
138 3i83_A 2-dehydropantoate 2-red 26.8 1.6E+02 0.0053 29.4 7.7 67 242-319 2-79 (320)
139 2ixa_A Alpha-N-acetylgalactosa 26.6 1.2E+02 0.004 31.9 7.1 52 601-654 67-120 (444)
140 2bln_A Protein YFBG; transfera 26.6 1.1E+02 0.0038 31.3 6.7 69 243-318 1-82 (305)
141 3oid_A Enoyl-[acyl-carrier-pro 26.6 75 0.0025 30.5 5.2 33 241-278 2-34 (258)
142 4da9_A Short-chain dehydrogena 26.4 58 0.002 31.7 4.5 32 243-279 29-60 (280)
143 2ho3_A Oxidoreductase, GFO/IDH 26.4 58 0.002 32.3 4.5 53 595-655 39-92 (325)
144 2pk3_A GDP-6-deoxy-D-LYXO-4-he 26.4 71 0.0024 30.7 5.0 76 233-320 3-83 (321)
145 3dkr_A Esterase D; alpha beta 25.9 72 0.0025 27.9 4.6 37 242-280 21-57 (251)
146 3bjr_A Putative carboxylestera 25.7 1.1E+02 0.0037 28.4 6.0 38 243-280 50-88 (283)
147 4h3v_A Oxidoreductase domain p 25.5 59 0.002 32.4 4.4 54 593-654 49-104 (390)
148 3ip3_A Oxidoreductase, putativ 25.2 1.1E+02 0.0037 30.6 6.3 87 553-654 8-96 (337)
149 1vs1_A 3-deoxy-7-phosphoheptul 25.2 1.5E+02 0.0051 30.2 7.3 61 593-658 92-154 (276)
150 1tlt_A Putative oxidoreductase 25.1 1.1E+02 0.0039 30.1 6.3 40 614-655 56-95 (319)
151 2yzk_A OPRT, oprtase, orotate 25.1 1.1E+02 0.0036 28.4 5.8 56 241-299 105-162 (178)
152 4fb5_A Probable oxidoreductase 24.9 65 0.0022 32.1 4.5 52 595-654 70-123 (393)
153 1kyq_A Met8P, siroheme biosynt 24.9 1.1E+02 0.0038 31.0 6.3 34 242-282 13-46 (274)
154 1fmt_A Methionyl-tRNA FMet for 24.9 1.2E+02 0.0041 31.2 6.6 70 242-318 3-88 (314)
155 3pg5_A Uncharacterized protein 24.7 85 0.0029 32.1 5.5 48 243-290 1-48 (361)
156 3qiv_A Short-chain dehydrogena 24.6 65 0.0022 30.3 4.3 33 242-279 8-40 (253)
157 2fuk_A XC6422 protein; A/B hyd 24.5 98 0.0033 27.2 5.2 39 242-280 36-77 (220)
158 1hdo_A Biliverdin IX beta redu 24.5 91 0.0031 27.6 5.0 58 260-319 15-75 (206)
159 3trd_A Alpha/beta hydrolase; c 24.5 1E+02 0.0035 27.0 5.3 39 242-280 30-71 (208)
160 3q9l_A Septum site-determining 24.4 1.8E+02 0.0063 27.0 7.4 39 244-282 3-41 (260)
161 2o2g_A Dienelactone hydrolase; 23.9 86 0.003 27.2 4.7 37 243-279 35-71 (223)
162 4gqa_A NAD binding oxidoreduct 23.8 87 0.003 32.2 5.4 54 593-654 70-125 (412)
163 2afh_E Nitrogenase iron protei 23.7 1.7E+02 0.0057 28.3 7.1 46 243-289 2-47 (289)
164 3slg_A PBGP3 protein; structur 23.7 1.4E+02 0.0047 29.5 6.7 83 229-319 12-99 (372)
165 3euw_A MYO-inositol dehydrogen 23.4 67 0.0023 32.1 4.3 53 595-656 42-96 (344)
166 3fwz_A Inner membrane protein 23.3 1.1E+02 0.0037 26.6 5.2 58 260-319 18-79 (140)
167 4g65_A TRK system potassium up 23.2 42 0.0014 36.0 3.0 63 593-658 268-334 (461)
168 2ew8_A (S)-1-phenylethanol deh 23.2 1.3E+02 0.0043 28.5 6.0 20 260-279 19-38 (249)
169 3r3s_A Oxidoreductase; structu 23.1 1.2E+02 0.0039 29.8 5.9 33 242-279 48-80 (294)
170 2ark_A Flavodoxin; FMN, struct 23.0 95 0.0032 28.4 5.0 37 243-281 5-43 (188)
171 2vch_A Hydroquinone glucosyltr 23.0 82 0.0028 33.5 5.1 46 604-654 328-382 (480)
172 3auf_A Glycinamide ribonucleot 22.9 1.3E+02 0.0046 29.6 6.3 71 243-318 23-108 (229)
173 3ea0_A ATPase, para family; al 22.7 1.4E+02 0.0048 27.5 6.1 42 242-283 3-45 (245)
174 3av3_A Phosphoribosylglycinami 22.4 1.2E+02 0.004 29.4 5.7 71 243-318 4-89 (212)
175 3sxp_A ADP-L-glycero-D-mannohe 22.3 2.5E+02 0.0084 27.7 8.2 60 260-319 22-98 (362)
176 1cp2_A CP2, nitrogenase iron p 22.1 1.7E+02 0.006 27.6 6.8 45 243-288 1-45 (269)
177 2rk3_A Protein DJ-1; parkinson 21.9 2.4E+02 0.008 26.0 7.5 71 240-319 1-74 (197)
178 3u7q_B Nitrogenase molybdenum- 21.9 1.5E+02 0.0051 32.6 7.0 80 234-320 356-447 (523)
179 4gbj_A 6-phosphogluconate dehy 21.6 1.1E+02 0.0036 30.8 5.3 65 241-318 4-68 (297)
180 4hp8_A 2-deoxy-D-gluconate 3-d 21.6 1.2E+02 0.0039 30.3 5.6 73 243-320 9-88 (247)
181 3hn2_A 2-dehydropantoate 2-red 21.6 1.5E+02 0.0053 29.3 6.5 67 242-319 2-77 (312)
182 3rkr_A Short chain oxidoreduct 21.6 92 0.0032 29.7 4.7 32 243-279 29-60 (262)
183 3m2t_A Probable dehydrogenase; 21.6 67 0.0023 32.7 4.0 39 614-654 57-97 (359)
184 3rfo_A Methionyl-tRNA formyltr 21.5 91 0.0031 32.2 4.9 69 243-318 5-89 (317)
185 3h7a_A Short chain dehydrogena 21.3 1E+02 0.0034 29.5 4.9 51 243-298 7-59 (252)
186 4imr_A 3-oxoacyl-(acyl-carrier 21.3 2E+02 0.0067 27.9 7.1 34 242-280 32-65 (275)
187 2ywr_A Phosphoribosylglycinami 21.2 1.2E+02 0.0042 29.4 5.6 71 243-318 2-87 (216)
188 2b69_A UDP-glucuronate decarbo 21.2 3.1E+02 0.011 26.7 8.5 58 260-320 39-100 (343)
189 2gk4_A Conserved hypothetical 21.2 1.1E+02 0.0037 30.6 5.2 59 260-321 31-94 (232)
190 4e08_A DJ-1 beta; flavodoxin-l 21.1 3E+02 0.01 25.2 7.9 70 241-319 4-75 (190)
191 3afn_B Carbonyl reductase; alp 21.0 1.9E+02 0.0065 26.8 6.6 21 260-280 19-39 (258)
192 1mio_B Nitrogenase molybdenum 20.9 1.6E+02 0.0055 31.4 6.9 78 236-320 306-394 (458)
193 2ph1_A Nucleotide-binding prot 20.9 1.8E+02 0.0061 27.8 6.6 43 243-285 18-60 (262)
194 3itj_A Thioredoxin reductase 1 20.7 55 0.0019 31.3 3.0 52 241-299 172-228 (338)
195 3ijp_A DHPR, dihydrodipicolina 20.6 35 0.0012 35.1 1.6 46 614-661 79-124 (288)
196 1zi8_A Carboxymethylenebutenol 20.6 1.3E+02 0.0045 26.5 5.3 36 243-280 28-63 (236)
197 1qyc_A Phenylcoumaran benzylic 20.4 1.4E+02 0.0049 28.4 5.8 70 245-319 6-85 (308)
198 3llv_A Exopolyphosphatase-rela 20.4 1.2E+02 0.0043 25.8 4.9 58 260-319 17-78 (141)
199 3pe6_A Monoglyceride lipase; a 20.3 1.1E+02 0.0039 27.3 4.8 36 243-280 42-77 (303)
200 2hy5_B Intracellular sulfur ox 20.3 1.4E+02 0.0046 27.1 5.3 37 244-280 7-44 (136)
201 3phh_A Shikimate dehydrogenase 20.2 2.8E+02 0.0095 28.0 8.1 64 242-320 118-181 (269)
202 3u5t_A 3-oxoacyl-[acyl-carrier 20.2 69 0.0024 31.0 3.6 34 241-279 25-58 (267)
203 4ds3_A Phosphoribosylglycinami 20.2 1.4E+02 0.0049 29.1 5.8 74 240-318 5-93 (209)
204 3mcu_A Dipicolinate synthase, 20.2 84 0.0029 30.9 4.2 39 241-283 4-43 (207)
205 3qjg_A Epidermin biosynthesis 20.0 68 0.0023 30.6 3.4 74 241-319 4-84 (175)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.97 E-value=1.8e-30 Score=258.06 Aligned_cols=298 Identities=17% Similarity=0.151 Sum_probs=207.4
Q ss_pred CCeEEEEeCC---CCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhH-----------------HhcCCeEEEEcC
Q 005746 242 SRKFILIFHE---LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE-----------------LARRKIKVLEDR 301 (679)
Q Consensus 242 ~rKILlI~he---LsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~E-----------------L~rrgIkVl~~r 301 (679)
+|||++|.++ ...||++..+.+||.+|.+.||+|++++....+....+ ....|++++..+
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~ 81 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIG 81 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEE
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEec
Confidence 5899999998 45699999999999999999999999986544322110 034678876543
Q ss_pred CCc----------------c---h--------h----hhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhh--
Q 005746 302 GEP----------------S---F--------K----TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR-- 348 (679)
Q Consensus 302 ~~~----------------s---f--------k----~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~r-- 348 (679)
... . | + ...++|+||++...++ ++..++... .+.++++++|...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~-~~~~~~~~~--~~~~~v~~~h~~~~~ 158 (439)
T 3fro_A 82 GGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTV-FAGALIKKY--FKIPAVFTIHRLNKS 158 (439)
T ss_dssp SGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGH-HHHHHHHHH--HCCCEEEEESCCCCC
T ss_pred chhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhh-hhHHHHhhc--cCCCEEEEecccccc
Confidence 200 0 0 0 1348999999975432 222223221 1234677777542
Q ss_pred ---HHHH--------------HHHHHHhhcCCEEEEechhhHHHHHHHHHHhhccCCCCcEEeeCCCchhhhhhhccccC
Q 005746 349 ---REYF--------------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCS 411 (679)
Q Consensus 349 ---reYf--------------dr~k~vl~rvk~LIfvSesq~k~w~~~~~eegi~l~sq~~VVP~gVndElafvagi~~s 411 (679)
..++ ...+..+.+++.+|++|+...+.... ..++. ..++.|||||++.+.+....+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~---~~~~~-~~~i~vi~ngvd~~~~~~~~~--- 231 (439)
T 3fro_A 159 KLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWG---FFRNF-EGKITYVFNGIDCSFWNESYL--- 231 (439)
T ss_dssp CEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHH---HHGGG-TTSEEECCCCCCTTTSCGGGS---
T ss_pred cCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhh---hhhhc-CCceeecCCCCCchhcCcccc---
Confidence 1111 12345677899999999987765221 11222 357899999998764321110
Q ss_pred CCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEeccC-CCCCHHHHHHHHHHHHHhCCCCchhhhhhcccccccc
Q 005746 412 LNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN-PGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKK 490 (679)
Q Consensus 412 lntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGrIn-p~KGq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~ 490 (679)
.+ .....+..+|+++|++++ ++|+++|++. +.||++.|++|++.+.++..
T Consensus 232 ------~~-----~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~----------------- 282 (439)
T 3fro_A 232 ------TG-----SRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKE----------------- 282 (439)
T ss_dssp ------CS-----CHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGG-----------------
T ss_pred ------cc-----hhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhccc-----------------
Confidence 00 112346789999999888 9999999999 99999999999999865320
Q ss_pred cccccccccccccccccccccCCcccccccccccccccccccccccCCCCcccccCCCCccccCCccchhhhcccccccc
Q 005746 491 SSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQ 570 (679)
Q Consensus 491 ~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 570 (679)
.
T Consensus 283 -------------------------------------------------------------------------------~ 283 (439)
T 3fro_A 283 -------------------------------------------------------------------------------F 283 (439)
T ss_dssp -------------------------------------------------------------------------------G
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCC--chhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHc
Q 005746 571 QQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPA--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAF 648 (679)
Q Consensus 571 ~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~--~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~ 648 (679)
+++++++ +|.+. . ...+.++.++++++ +.+.|+|+ .++++.+|++||++|+||. .|+||++++|||||
T Consensus 284 ~~~~l~i---~G~g~--~-~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~ 353 (439)
T 3fro_A 284 QEMRFII---IGKGD--P-ELEGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCL 353 (439)
T ss_dssp GGEEEEE---ECCCC--H-HHHHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBS--CCSSCHHHHHHHHT
T ss_pred CCeEEEE---EcCCC--h-hHHHHHHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCC--CCCccHHHHHHHHC
Confidence 2345564 56542 2 23466777888777 88899994 6789999999999999996 89999999999999
Q ss_pred CCCEEEeCCCCCccCCCCC
Q 005746 649 GVPKNISQIELSRKDPTSG 667 (679)
Q Consensus 649 GlPVV~S~~g~~r~~~~~~ 667 (679)
|+|||+|++++.++...+|
T Consensus 354 G~Pvi~s~~~~~~e~~~~~ 372 (439)
T 3fro_A 354 GAIPIASAVGGLRDIITNE 372 (439)
T ss_dssp TCEEEEESSTHHHHHCCTT
T ss_pred CCCeEEcCCCCcceeEEcC
Confidence 9999999999988765444
No 2
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.97 E-value=8.2e-31 Score=263.65 Aligned_cols=300 Identities=17% Similarity=0.155 Sum_probs=206.2
Q ss_pred cccccccCCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhH---Hh--cCCeEEEEcCCC--cc
Q 005746 233 KGDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE---LA--RRKIKVLEDRGE--PS 305 (679)
Q Consensus 233 k~~f~~~~~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~E---L~--rrgIkVl~~r~~--~s 305 (679)
-.++..-|.+|||+++.+.+..||++..+.+|+.+|.+.||+|++++....+.+.+. +. -.+++++..... ..
T Consensus 31 ~~~~~~~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (416)
T 2x6q_A 31 IQEKAEKLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTEEMKEL 110 (416)
T ss_dssp HHHHHHTTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHHTTCCSCCCCHHHHHH
T ss_pred HHHhhhhhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhhcccceeecccccccccHHHHHH
Confidence 344566677899999999998999999999999999999999998876543322111 11 112212111100 00
Q ss_pred h----------hhhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhh----HHHHHHHHHHhhcCCEEEE-ech
Q 005746 306 F----------KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR----REYFDRAKLVLDRVKLLVF-LSE 370 (679)
Q Consensus 306 f----------k~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~r----reYfdr~k~vl~rvk~LIf-vSe 370 (679)
+ ....++|+||+++.....+. ..... ..+++|++|... ..++...+.++.+++.+|+ +|+
T Consensus 111 ~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~----~~~~~-~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 185 (416)
T 2x6q_A 111 YLNVNRENSKFIDLSSFDYVLVHDPQPAALI----EFYEK-KSPWLWRCHIDLSSPNREFWEFLRRFVEKYDRYIFHLPE 185 (416)
T ss_dssp HHHHHHHHHHSSCGGGSSEEEEESSTTGGGG----GGSCC-CSCEEEECCSCCSSCCHHHHHHHHHHHTTSSEEEESSGG
T ss_pred HHHHHHHHHHHHhhcCCCEEEEeccchhhHH----HHHHh-cCCEEEEEccccCCccHHHHHHHHHHHHhCCEEEEechH
Confidence 0 11248999999875432211 11111 256777777531 2233334556777888775 454
Q ss_pred hhHHHHHHHHHHhhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEe
Q 005746 371 SQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLS 450 (679)
Q Consensus 371 sq~k~w~~~~~eegi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvG 450 (679)
...+ .+. ..+..|||+|++...+. ...+.++ .+..+|+++|++++.++|+++|
T Consensus 186 ~~~~---------~~~-~~~~~vi~ngvd~~~~~---------~~~~~~~--------~~~~~r~~~~~~~~~~~i~~vG 238 (416)
T 2x6q_A 186 YVQP---------ELD-RNKAVIMPPSIDPLSEK---------NVELKQT--------EILRILERFDVDPEKPIITQVS 238 (416)
T ss_dssp GSCT---------TSC-TTTEEECCCCBCTTSTT---------TSCCCHH--------HHHHHHHHTTCCTTSCEEEEEC
T ss_pred HHHh---------hCC-ccceEEeCCCCChhhhc---------ccccChh--------hHHHHHHHhCCCCCCcEEEEEe
Confidence 4322 222 14688999999754211 1112221 2456889999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCccccccccccccccccc
Q 005746 451 SINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNE 530 (679)
Q Consensus 451 rInp~KGq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (679)
++.+.||++.|++|++.+.++.|+
T Consensus 239 rl~~~Kg~~~li~a~~~l~~~~~~-------------------------------------------------------- 262 (416)
T 2x6q_A 239 RFDPWKGIFDVIEIYRKVKEKIPG-------------------------------------------------------- 262 (416)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHCTT--------------------------------------------------------
T ss_pred ccccccCHHHHHHHHHHHHHhCCC--------------------------------------------------------
Confidence 999999999999999998765443
Q ss_pred ccccccCCCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEE
Q 005746 531 PVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLW 610 (679)
Q Consensus 531 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~f 610 (679)
+++++ +|++....+...+.++.+++.+++.++|.|
T Consensus 263 ------------------------------------------~~l~i---~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~ 297 (416)
T 2x6q_A 263 ------------------------------------------VQLLL---VGVMAHDDPEGWIYFEKTLRKIGEDYDVKV 297 (416)
T ss_dssp ------------------------------------------CEEEE---EECCCTTCHHHHHHHHHHHHHHTTCTTEEE
T ss_pred ------------------------------------------eEEEE---EecCcccchhHHHHHHHHHHHhCCCCcEEE
Confidence 23454 455433223456667788888999999999
Q ss_pred CCCch-----hHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccCCCCC
Q 005746 611 TPATT-----RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTSG 667 (679)
Q Consensus 611 tG~~t-----dVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~~~~ 667 (679)
+|+.+ +++.+|++||++|+||. .|+||++++||||||+|||+|++++.++...+|
T Consensus 298 ~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~ 357 (416)
T 2x6q_A 298 LTNLIGVHAREVNAFQRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDG 357 (416)
T ss_dssp EEGGGTCCHHHHHHHHHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBT
T ss_pred ecccCCCCHHHHHHHHHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCChhheecC
Confidence 99654 89999999999999996 899999999999999999999999887755443
No 3
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.97 E-value=6.4e-30 Score=251.39 Aligned_cols=290 Identities=18% Similarity=0.213 Sum_probs=210.6
Q ss_pred CCCCeEEEEeCCCC--CCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHH-hcCCeEEEEcCCCcc-----------
Q 005746 240 VWSRKFILIFHELS--MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPEL-ARRKIKVLEDRGEPS----------- 305 (679)
Q Consensus 240 ~~~rKILlI~heLs--mgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL-~rrgIkVl~~r~~~s----------- 305 (679)
+..+||++|.+.+. .||++..+.+|+.+| .||+|++++....+...+++ ...+++++.......
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 79 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMA 79 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHHH
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccccchhhHHHHH
Confidence 34689999999776 799999999999999 69999998866543222333 356888887554221
Q ss_pred -hhhhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhhH------HHHHHHHHHhhcCCEEEEechhhHHHHHH
Q 005746 306 -FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR------EYFDRAKLVLDRVKLLVFLSESQTKQWLT 378 (679)
Q Consensus 306 -fk~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~rr------eYfdr~k~vl~rvk~LIfvSesq~k~w~~ 378 (679)
+....++|+||++......++..+... .+.+++++++|.... .+....+.++.+++.+|++|+...+.+..
T Consensus 80 ~~~~~~~~Dvv~~~~~~~~~~~~~~~~~--~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 157 (394)
T 3okp_A 80 EIIREREIDNVWFGAAAPLALMAGTAKQ--AGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKS 157 (394)
T ss_dssp HHHHHTTCSEEEESSCTTGGGGHHHHHH--TTCSEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHH
T ss_pred HHHHhcCCCEEEECCcchHHHHHHHHHh--cCCCcEEEEeccchhhhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHH
Confidence 112458999999865433333322222 244567877775321 11122356678899999999998877443
Q ss_pred HHHHhhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEeccCCCCCH
Q 005746 379 WCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQ 458 (679)
Q Consensus 379 ~~~eegi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGrInp~KGq 458 (679)
. .+ ...++.|||++++.+. |.+.. ...+..+|+++|++++.++|+++|++.+.||+
T Consensus 158 ~---~~--~~~~~~vi~ngv~~~~--------------~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~ 213 (394)
T 3okp_A 158 A---FG--SHPTFEHLPSGVDVKR--------------FTPAT-----PEDKSATRKKLGFTDTTPVIACNSRLVPRKGQ 213 (394)
T ss_dssp H---HC--SSSEEEECCCCBCTTT--------------SCCCC-----HHHHHHHHHHTTCCTTCCEEEEESCSCGGGCH
T ss_pred h---cC--CCCCeEEecCCcCHHH--------------cCCCC-----chhhHHHHHhcCCCcCceEEEEEeccccccCH
Confidence 2 22 2346899999997653 22211 12356789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCcccccccccccccccccccccccCC
Q 005746 459 LLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLS 538 (679)
Q Consensus 459 ~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (679)
+.|++|++.+.++.|+
T Consensus 214 ~~li~a~~~l~~~~~~---------------------------------------------------------------- 229 (394)
T 3okp_A 214 DSLIKAMPQVIAARPD---------------------------------------------------------------- 229 (394)
T ss_dssp HHHHHHHHHHHHHSTT----------------------------------------------------------------
T ss_pred HHHHHHHHHHHhhCCC----------------------------------------------------------------
Confidence 9999999998775443
Q ss_pred CCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCc--hh
Q 005746 539 PSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPAT--TR 616 (679)
Q Consensus 539 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~--td 616 (679)
+.+++ +|.+. ..+.++.++ .++.++|.|+|+. ++
T Consensus 230 ----------------------------------~~l~i---~G~g~-----~~~~l~~~~--~~~~~~v~~~g~~~~~~ 265 (394)
T 3okp_A 230 ----------------------------------AQLLI---VGSGR-----YESTLRRLA--TDVSQNVKFLGRLEYQD 265 (394)
T ss_dssp ----------------------------------CEEEE---ECCCT-----THHHHHHHT--GGGGGGEEEEESCCHHH
T ss_pred ----------------------------------eEEEE---EcCch-----HHHHHHHHH--hcccCeEEEcCCCCHHH
Confidence 23453 56542 234455555 5788999999997 89
Q ss_pred HHHHHHHcCEEEEcCCCCC-------CCccHHHHHHHHcCCCEEEeCCCCCccCCCCC
Q 005746 617 VASLYSAADVYVINSQGLG-------ETFGRVTIEAMAFGVPKNISQIELSRKDPTSG 667 (679)
Q Consensus 617 VaslysAADV~VlpSq~~~-------EgFGrV~IEAMA~GlPVV~S~~g~~r~~~~~~ 667 (679)
+..+|++||++|+||. . |+||++++||||||+|||+|++++.++...+|
T Consensus 266 ~~~~~~~ad~~v~ps~--~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~ 321 (394)
T 3okp_A 266 MINTLAAADIFAMPAR--TRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA 321 (394)
T ss_dssp HHHHHHHCSEEEECCC--CBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT
T ss_pred HHHHHHhCCEEEecCc--cccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC
Confidence 9999999999999997 6 99999999999999999999999999877665
No 4
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.97 E-value=4.3e-29 Score=251.51 Aligned_cols=298 Identities=17% Similarity=0.229 Sum_probs=202.4
Q ss_pred CCeEEEEeCCC---------CCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChh-HHhcCCeEEEEcCCCc-------
Q 005746 242 SRKFILIFHEL---------SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMP-ELARRKIKVLEDRGEP------- 304 (679)
Q Consensus 242 ~rKILlI~heL---------smgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~-EL~rrgIkVl~~r~~~------- 304 (679)
.|||++|.+.. ..||++..+.+||.+|.+.||+|++++......... +....+++++......
T Consensus 20 mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~ 99 (438)
T 3c48_A 20 HMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKE 99 (438)
T ss_dssp CCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSCCGG
T ss_pred hheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCccccchh
Confidence 37999999865 358999999999999999999999988664322111 1123577776543210
Q ss_pred c-------h----h-----hhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhhHH---------------HHH
Q 005746 305 S-------F----K-----TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE---------------YFD 353 (679)
Q Consensus 305 s-------f----k-----~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~rre---------------Yfd 353 (679)
. | . ...++|+||++.... .++..+++... ..++++.+|..... ...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~-~~~~~~~~~~~--~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ 176 (438)
T 3c48_A 100 ELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLS-GQVGWLLRDLW--RIPLIHTAHTLAAVKNSYRDDSDTPESEARRI 176 (438)
T ss_dssp GGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHH-HHHHHHHHHHH--TCCEEEECSSCHHHHSCC----CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccH-HHHHHHHHHHc--CCCEEEEecCCcccccccccccCCcchHHHHH
Confidence 0 0 0 011499999987432 23322222211 23466666654210 001
Q ss_pred HHHHHhhcCCEEEEechhhHHHHHHHHHHhhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHH
Q 005746 354 RAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSV 433 (679)
Q Consensus 354 r~k~vl~rvk~LIfvSesq~k~w~~~~~eegi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~sv 433 (679)
..+.++..++.+|++|+...+.+.. ..++.. .++.|||++++.+.+ .+... ..++.+
T Consensus 177 ~~~~~~~~~d~ii~~s~~~~~~~~~---~~g~~~-~k~~vi~ngvd~~~~--------------~~~~~-----~~~~~~ 233 (438)
T 3c48_A 177 CEQQLVDNADVLAVNTQEEMQDLMH---HYDADP-DRISVVSPGADVELY--------------SPGND-----RATERS 233 (438)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHH---HHCCCG-GGEEECCCCCCTTTS--------------CCC---------CHHH
T ss_pred HHHHHHhcCCEEEEcCHHHHHHHHH---HhCCCh-hheEEecCCcccccc--------------CCccc-----chhhhh
Confidence 1245677899999999998877432 234432 368999999976532 11110 112347
Q ss_pred HHHcCCCCCCEEEEEEeccCCCCCHHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCC
Q 005746 434 RKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGL 513 (679)
Q Consensus 434 RkelGL~d~d~LVlsvGrInp~KGq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~ 513 (679)
|+++|++++.++|+++|++.+.||++.|++|++.+.++.|.
T Consensus 234 r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~--------------------------------------- 274 (438)
T 3c48_A 234 RRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPD--------------------------------------- 274 (438)
T ss_dssp HHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTT---------------------------------------
T ss_pred HHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCC---------------------------------------
Confidence 88999999999999999999999999999999999876542
Q ss_pred cccccccccccccccccccccccCCCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHH
Q 005746 514 SSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKE 593 (679)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~ 593 (679)
.+++++++ |......+ ..+
T Consensus 275 ---------------------------------------------------------~~~~l~i~---G~~~~~g~-~~~ 293 (438)
T 3c48_A 275 ---------------------------------------------------------RNLRVIIC---GGPSGPNA-TPD 293 (438)
T ss_dssp ---------------------------------------------------------CSEEEEEE---CCBC-------C
T ss_pred ---------------------------------------------------------cceEEEEE---eCCCCCCc-HHH
Confidence 12345644 44110011 234
Q ss_pred HHHHHHHhCCCCCcEEECCCc--hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccCCCCC
Q 005746 594 ILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTSG 667 (679)
Q Consensus 594 ~L~~L~~~lnLs~~V~ftG~~--tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~~~~ 667 (679)
.++.++++++++++|.|+|+. +++..+|++||++|+||. .|+||++++||||||+|||+|++++..+...+|
T Consensus 294 ~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~ 367 (438)
T 3c48_A 294 TYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLPIAVAEG 367 (438)
T ss_dssp HHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBT
T ss_pred HHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChhHHhhCC
Confidence 566777889999999999997 799999999999999996 899999999999999999999999988755443
No 5
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.97 E-value=8.4e-29 Score=247.37 Aligned_cols=287 Identities=16% Similarity=0.147 Sum_probs=195.3
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCC-------Ccc--h------
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRG-------EPS--F------ 306 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~-------~~s--f------ 306 (679)
+.++..... -..||++..+.+||.+|.+.||+|++++......+. ....++.+..... ... +
T Consensus 15 ~~~~~~~~~-p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 91 (394)
T 2jjm_A 15 KLKIGITCY-PSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN--KVYPNIYFHEVTVNQYSVFQYPPYDLALASKM 91 (394)
T ss_dssp CCEEEEECC-C--CHHHHHHHHHHHHHHHTTCEEEEECSSCC------CCCTTEEEECCCCC----CCSCCHHHHHHHHH
T ss_pred eeeeehhcC-CCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc--ccCCceEEEecccccccccccccccHHHHHHH
Confidence 445554443 247999999999999999999999988754322211 1234555543211 000 0
Q ss_pred ---hhhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhhH-------HHHHHHHHHhhcCCEEEEechhhHHHH
Q 005746 307 ---KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR-------EYFDRAKLVLDRVKLLVFLSESQTKQW 376 (679)
Q Consensus 307 ---k~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~rr-------eYfdr~k~vl~rvk~LIfvSesq~k~w 376 (679)
....++|+||+++.....+...+.........++++++|.... .+....+.++.+++.+|++|+...+.+
T Consensus 92 ~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 171 (394)
T 2jjm_A 92 AEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINET 171 (394)
T ss_dssp HHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHH
T ss_pred HHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHH
Confidence 1235899999986543322221222221113467778876321 112223456778999999999988774
Q ss_pred HHHHHHhhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEeccCCCC
Q 005746 377 LTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGK 456 (679)
Q Consensus 377 ~~~~~eegi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGrInp~K 456 (679)
.. .... +.++.|||++++.+. |.+.. +..+|+++|++++.++|+++|++.+.|
T Consensus 172 ~~----~~~~-~~~~~vi~ngv~~~~--------------~~~~~--------~~~~~~~~~~~~~~~~i~~~G~~~~~K 224 (394)
T 2jjm_A 172 HE----LVKP-NKDIQTVYNFIDERV--------------YFKRD--------MTQLKKEYGISESEKILIHISNFRKVK 224 (394)
T ss_dssp HH----HTCC-SSCEEECCCCCCTTT--------------CCCCC--------CHHHHHHTTCC---CEEEEECCCCGGG
T ss_pred HH----hhCC-cccEEEecCCccHHh--------------cCCcc--------hHHHHHHcCCCCCCeEEEEeecccccc
Confidence 33 2221 357899999997642 21111 134678899988889999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCccccccccccccccccccccccc
Q 005746 457 GQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNL 536 (679)
Q Consensus 457 Gq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (679)
|++.|++|++.+.++ ++
T Consensus 225 g~~~li~a~~~l~~~-~~-------------------------------------------------------------- 241 (394)
T 2jjm_A 225 RVQDVVQAFAKIVTE-VD-------------------------------------------------------------- 241 (394)
T ss_dssp THHHHHHHHHHHHHS-SC--------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHhh-CC--------------------------------------------------------------
Confidence 999999999988653 11
Q ss_pred CCCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchh
Q 005746 537 LSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTR 616 (679)
Q Consensus 537 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~td 616 (679)
..+++ +|.+. ..+.++.+++++++.++|.|+|..++
T Consensus 242 ------------------------------------~~l~i---~G~g~-----~~~~l~~~~~~~~l~~~v~~~g~~~~ 277 (394)
T 2jjm_A 242 ------------------------------------AKLLL---VGDGP-----EFCTILQLVKNLHIEDRVLFLGKQDN 277 (394)
T ss_dssp ------------------------------------CEEEE---ECCCT-----THHHHHHHHHTTTCGGGBCCCBSCSC
T ss_pred ------------------------------------CEEEE---ECCch-----HHHHHHHHHHHcCCCCeEEEeCchhh
Confidence 23453 46543 23456777888999999999999999
Q ss_pred HHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccCCCCC
Q 005746 617 VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTSG 667 (679)
Q Consensus 617 VaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~~~~ 667 (679)
+..+|++||++|+||. .|+||++++||||||+|||+|++++..+...+|
T Consensus 278 ~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~ 326 (394)
T 2jjm_A 278 VAELLAMSDLMLLLSE--KESFGLVLLEAMACGVPCIGTRVGGIPEVIQHG 326 (394)
T ss_dssp THHHHHTCSEEEECCS--CCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBT
T ss_pred HHHHHHhCCEEEeccc--cCCCchHHHHHHhcCCCEEEecCCChHHHhhcC
Confidence 9999999999999996 899999999999999999999999998876554
No 6
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.96 E-value=6.3e-29 Score=255.44 Aligned_cols=308 Identities=14% Similarity=0.105 Sum_probs=203.6
Q ss_pred CeEEEEeCCC----CCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHH----------------------hcCCeE
Q 005746 243 RKFILIFHEL----SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPEL----------------------ARRKIK 296 (679)
Q Consensus 243 rKILlI~heL----smgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL----------------------~rrgIk 296 (679)
|||++|.+++ ..||++..+.+||++|.+.||+|++++....+ ....+ ...|++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 79 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPA-VKAAVTDPVKCFEFTDLLGEKADLLEVQHERLD 79 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHH-HHHHCCSCEEEEEESCSSSCCEEEEEEEETTEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccccc-ccccccccceeEEEEEecCCeEEEEEEEecCce
Confidence 6899999987 46899999999999999999999998865321 11111 135777
Q ss_pred EEEcCC---------Cc-------------c---h--------h---hhcCcCEEEEcchhHHHHHHHHHHhcCCCCccE
Q 005746 297 VLEDRG---------EP-------------S---F--------K---TSMKADLVIAGSAVCATWIDQYITRFPAGGSQV 340 (679)
Q Consensus 297 Vl~~r~---------~~-------------s---f--------k---~~~kaDLVia~Sav~aswI~qyia~~pag~s~V 340 (679)
|+.... .. . + + ...++|+||+|+..+ .++..+++.......++
T Consensus 80 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~-~~~~~~~~~~~~~~~p~ 158 (485)
T 1rzu_A 80 LLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQA-AMTPVYMRYAETPEIPS 158 (485)
T ss_dssp EEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHH-TTHHHHHHHSSSCCCCE
T ss_pred EEEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccch-hHHHHHHhhcccCCCCE
Confidence 764211 00 0 1 1 135799999997432 22333333321123457
Q ss_pred EEeeehhhH----------------HHH-----------HHHHHHhhcCCEEEEechhhHHHHHHHHHHhhcc-------
Q 005746 341 VWWIMENRR----------------EYF-----------DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLK------- 386 (679)
Q Consensus 341 vWwI~E~rr----------------eYf-----------dr~k~vl~rvk~LIfvSesq~k~w~~~~~eegi~------- 386 (679)
++.+|.... .++ ...+.++..++.+|++|+...+.+... ..|+.
T Consensus 159 v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~--~~g~~~~~~~~~ 236 (485)
T 1rzu_A 159 LLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTA--EFGMGLEGVIGS 236 (485)
T ss_dssp EEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH--HHHTTCHHHHHT
T ss_pred EEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHHHHhcc--ccCcchHHHHHh
Confidence 777776310 000 122455778999999999987764321 01210
Q ss_pred CCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCC-CEEEEEEeccCCCCCHHHHHHHH
Q 005746 387 LRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQ-DMLVLSLSSINPGKGQLLLVESA 465 (679)
Q Consensus 387 l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~-d~LVlsvGrInp~KGq~lLLeA~ 465 (679)
.+.++.|||||++.+.+..... ..-...+..+.+ +.+...+..+|+++|++++ +.+|+++|++.+.||++.|++|+
T Consensus 237 ~~~~~~vi~ngvd~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~ 313 (485)
T 1rzu_A 237 RAHVLHGIVNGIDADVWNPATD--HLIHDNYSAANL-KNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAV 313 (485)
T ss_dssp TGGGEEECCCCBCTTTSCTTTC--TTSSSCCBTTBC-TTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTH
T ss_pred hcCCceEEcCCCcccccCCccc--ccccccccccch-hhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHH
Confidence 1246899999998664321100 000001111111 1223346778999999986 78999999999999999999999
Q ss_pred HHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCcccccccccccccccccccccccCCCCccccc
Q 005746 466 QLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSI 545 (679)
Q Consensus 466 ~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 545 (679)
+.+.++ +
T Consensus 314 ~~l~~~--~----------------------------------------------------------------------- 320 (485)
T 1rzu_A 314 DEIVSL--G----------------------------------------------------------------------- 320 (485)
T ss_dssp HHHHHT--T-----------------------------------------------------------------------
T ss_pred HHHHhc--C-----------------------------------------------------------------------
Confidence 988642 1
Q ss_pred CCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEE-ECCCchhH-HHHHHH
Q 005746 546 GNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAML-WTPATTRV-ASLYSA 623 (679)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~-ftG~~tdV-aslysA 623 (679)
++++++ |++. . ..++.++.++++++ ++|. |+|+..+. +.+|++
T Consensus 321 ---------------------------~~l~iv---G~g~--~-~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~ 365 (485)
T 1rzu_A 321 ---------------------------GRLVVL---GAGD--V-ALEGALLAAASRHH--GRVGVAIGYNEPLSHLMQAG 365 (485)
T ss_dssp ---------------------------CEEEEE---ECBC--H-HHHHHHHHHHHHTT--TTEEEEESCCHHHHHHHHHH
T ss_pred ---------------------------ceEEEE---eCCc--h-HHHHHHHHHHHhCC--CcEEEecCCCHHHHHHHHhc
Confidence 234544 5432 2 24556777777664 7887 89997665 799999
Q ss_pred cCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccCCCCC
Q 005746 624 ADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTSG 667 (679)
Q Consensus 624 ADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~~~~ 667 (679)
||++|+||. .|+||++++||||||+|||+|++|+.++...+|
T Consensus 366 adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~ 407 (485)
T 1rzu_A 366 CDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDA 407 (485)
T ss_dssp CSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBC
T ss_pred CCEEEECcc--cCCCCHHHHHHHHCCCCEEEeCCCChhheeccc
Confidence 999999996 899999999999999999999999988766554
No 7
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.96 E-value=1.4e-28 Score=254.81 Aligned_cols=298 Identities=14% Similarity=0.125 Sum_probs=205.5
Q ss_pred CeEEEEeCCC-------------CCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhH----Hh----cCCeEEEEcC
Q 005746 243 RKFILIFHEL-------------SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE----LA----RRKIKVLEDR 301 (679)
Q Consensus 243 rKILlI~heL-------------smgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~E----L~----rrgIkVl~~r 301 (679)
|||++|.+.. ..||++..+.+||.+|.+.||+|++++....+...+. +. ..|++|+..+
T Consensus 8 MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~ 87 (499)
T 2r60_A 8 KHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIP 87 (499)
T ss_dssp CEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEEC
T ss_pred ceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEec
Confidence 7999999853 5699999999999999999999999886543322122 22 3588887543
Q ss_pred CCc-------c-----------hh---hh--cCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhhHHH-------
Q 005746 302 GEP-------S-----------FK---TS--MKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREY------- 351 (679)
Q Consensus 302 ~~~-------s-----------fk---~~--~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~rreY------- 351 (679)
... . +. .. .++|+||+|+... .++..+++... +.++++++|......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~-~~~~~~~~~~~--~~p~v~~~H~~~~~~~~~~~~~ 164 (499)
T 2r60_A 88 FGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDG-GLAGVLLKNIK--GLPFTFTGHSLGAQKMEKLNVN 164 (499)
T ss_dssp CSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHH-HHHHHHHHHHH--CCCEEEECSSCHHHHHHTTCCC
T ss_pred CCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcc-hHHHHHHHHhc--CCcEEEEccCcccccchhhccC
Confidence 210 0 00 11 3799999997543 33333332211 234667777642111
Q ss_pred ---------------H-HHHHHHhhcCCEEEEechhhHHHHHHHHHH--hh-c---cCCCCcEEeeCCCchhhhhhhccc
Q 005746 352 ---------------F-DRAKLVLDRVKLLVFLSESQTKQWLTWCEE--EK-L---KLRSQPAVVPLSVNDELAFVAGFT 409 (679)
Q Consensus 352 ---------------f-dr~k~vl~rvk~LIfvSesq~k~w~~~~~e--eg-i---~l~sq~~VVP~gVndElafvagi~ 409 (679)
. ...+.++..++.+|++|+...+.+.. . .+ + ....++.|||+|++.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~---~~~~g~~~~~~~~~ki~vi~ngvd~~~~------ 235 (499)
T 2r60_A 165 TSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYS---HDLYRGAVNVEDDDKFSVIPPGVNTRVF------ 235 (499)
T ss_dssp STTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTT---SGGGTTTCCTTCGGGEEECCCCBCTTTS------
T ss_pred CCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh---hhcccccccccCCCCeEEECCCcChhhc------
Confidence 0 11245677899999999988776321 1 23 2 012468999999976532
Q ss_pred cCCCCCCCChhhHHHhhHHHHHHHHHHcC-----CCCCCEEEEEEeccCCCCCHHHHHHHHHHHHHhCCCCchhhhhhcc
Q 005746 410 CSLNTPTSSPEKMREKRNLLRDSVRKEMG-----LTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSR 484 (679)
Q Consensus 410 ~slntp~fspek~~ekr~~lR~svRkelG-----L~d~d~LVlsvGrInp~KGq~lLLeA~~~lieq~p~~~~~~~~~~~ 484 (679)
.+... ...+..+|+++| ++++.++|+++|++.+.||++.|++|++.+.++.+.
T Consensus 236 --------~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~---------- 293 (499)
T 2r60_A 236 --------DGEYG----DKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDK---------- 293 (499)
T ss_dssp --------SSCCC----HHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHH----------
T ss_pred --------Cccch----hhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCC----------
Confidence 11110 123466888999 888899999999999999999999999987653221
Q ss_pred cccccccccccccccccccccccccccCCcccccccccccccccccccccccCCCCcccccCCCCccccCCccchhhhcc
Q 005746 485 NVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLS 564 (679)
Q Consensus 485 ~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 564 (679)
T Consensus 294 -------------------------------------------------------------------------------- 293 (499)
T 2r60_A 294 -------------------------------------------------------------------------------- 293 (499)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccceEEEEEEeeCCCCCC-----------hHHHHHHHHHHHHhCCCCCcEEECCCc--hhHHHHHHHc----CEE
Q 005746 565 KSDGKQQQALKILIGSVGSKSNK-----------VPYVKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAA----DVY 627 (679)
Q Consensus 565 ~l~~~~~~a~lvLiG~VGs~snk-----------~~y~k~~L~~L~~~lnLs~~V~ftG~~--tdVaslysAA----DV~ 627 (679)
..++++ +|...++ .+| .+.++.+++++|++++|.|+|+. ++++.+|++| ||+
T Consensus 294 -------~~~l~i---~G~~~~~~~~y~~l~~~~~~y-~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~ 362 (499)
T 2r60_A 294 -------ANLVLT---LRGIENPFEDYSRAGQEEKEI-LGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVF 362 (499)
T ss_dssp -------CEEEEE---ESSCSBTTTBCTTSCHHHHHH-HHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEE
T ss_pred -------ceEEEE---ECCCCCcccccccccccchHH-HHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEE
Confidence 012343 3441111 112 45577788889999999999995 8999999999 999
Q ss_pred EEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccCCCCC
Q 005746 628 VINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTSG 667 (679)
Q Consensus 628 VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~~~~ 667 (679)
|+||. .|+||++++||||||+|||+|++++.++...+|
T Consensus 363 v~pS~--~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~ 400 (499)
T 2r60_A 363 ALTSF--YEPFGLAPVEAMASGLPAVVTRNGGPAEILDGG 400 (499)
T ss_dssp EECCS--CBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGG
T ss_pred EECcc--cCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCC
Confidence 99996 899999999999999999999999888755543
No 8
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.96 E-value=2.7e-28 Score=238.88 Aligned_cols=284 Identities=17% Similarity=0.186 Sum_probs=191.1
Q ss_pred CeEEEEeCC-CCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcc---------------h
Q 005746 243 RKFILIFHE-LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS---------------F 306 (679)
Q Consensus 243 rKILlI~he-LsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~s---------------f 306 (679)
|||+++.+. ...||++..+.+||.+|.+.||+|++++....+.+. .+++++..+.... +
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~l~~~ 75 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCP-----KAFELIQVPVKSHTNHGRNAEYYAWVQNH 75 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCC-----TTCEEEECCCCCSSHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCCCC-----CCcEEEEEccCcccchhhHHHHHHHHHHH
Confidence 689999887 467999999999999999999999998765444332 3677765432211 0
Q ss_pred hhhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehh------h-HHHHHHHHHHhh--cCCEEEEechhhHHHHH
Q 005746 307 KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMEN------R-REYFDRAKLVLD--RVKLLVFLSESQTKQWL 377 (679)
Q Consensus 307 k~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~------r-reYfdr~k~vl~--rvk~LIfvSesq~k~w~ 377 (679)
....++|+||++....+..+ ++..... ....++..|.. + ..+....+.++. .++.+|++|+...+.+.
T Consensus 76 i~~~~~Dvv~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 152 (374)
T 2iw1_A 76 LKEHPADRVVGFNKMPGLDV--YFAADVC-YAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQ 152 (374)
T ss_dssp HHHSCCSEEEESSCCTTCSE--EECCSCC-HHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHH
T ss_pred HhccCCCEEEEecCCCCcee--eeccccc-cceeeeecccchhhhcHHHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHH
Confidence 12357999998763211000 0000000 00000000100 0 011111122232 58999999999888754
Q ss_pred HHHHHhhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEeccCCCCC
Q 005746 378 TWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKG 457 (679)
Q Consensus 378 ~~~~eegi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGrInp~KG 457 (679)
. ..++. ..++.|||++++.+.+.... . ...+..+|+++|++++.++|+++|++.+.||
T Consensus 153 ~---~~~~~-~~~~~vi~ngv~~~~~~~~~----------~--------~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~ 210 (374)
T 2iw1_A 153 K---HYQTE-PERFQILPPGIYPDRKYSEQ----------I--------PNSREIYRQKNGIKEQQNLLLQVGSDFGRKG 210 (374)
T ss_dssp H---HHCCC-GGGEEECCCCCCGGGSGGGS----------C--------TTHHHHHHHHTTCCTTCEEEEEECSCTTTTT
T ss_pred H---HhCCC-hhheEEecCCcCHHhcCccc----------c--------hhHHHHHHHHhCCCCCCeEEEEeccchhhcC
Confidence 3 23443 23689999999876432110 0 1124668899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCcccccccccccccccccccccccC
Q 005746 458 QLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLL 537 (679)
Q Consensus 458 q~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (679)
++.|++|++.+.++.
T Consensus 211 ~~~li~a~~~l~~~~----------------------------------------------------------------- 225 (374)
T 2iw1_A 211 VDRSIEALASLPESL----------------------------------------------------------------- 225 (374)
T ss_dssp HHHHHHHHHTSCHHH-----------------------------------------------------------------
T ss_pred HHHHHHHHHHhHhcc-----------------------------------------------------------------
Confidence 999999998764320
Q ss_pred CCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchhH
Q 005746 538 SPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRV 617 (679)
Q Consensus 538 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~tdV 617 (679)
.++..+++ +|.+. . +.++.++++++++++|.|+|..+++
T Consensus 226 --------------------------------~~~~~l~i---~G~g~--~----~~~~~~~~~~~~~~~v~~~g~~~~~ 264 (374)
T 2iw1_A 226 --------------------------------RHNTLLFV---VGQDK--P----RKFEALAEKLGVRSNVHFFSGRNDV 264 (374)
T ss_dssp --------------------------------HHTEEEEE---ESSSC--C----HHHHHHHHHHTCGGGEEEESCCSCH
T ss_pred --------------------------------CCceEEEE---EcCCC--H----HHHHHHHHHcCCCCcEEECCCcccH
Confidence 02234564 45542 1 2355566778999999999999999
Q ss_pred HHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccCC
Q 005746 618 ASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDP 664 (679)
Q Consensus 618 aslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~ 664 (679)
+.+|++||++|+||. .|+||++++||||||+|||+|++++..+..
T Consensus 265 ~~~~~~ad~~v~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i 309 (374)
T 2iw1_A 265 SELMAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYI 309 (374)
T ss_dssp HHHHHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHH
T ss_pred HHHHHhcCEEEeccc--cCCcccHHHHHHHCCCCEEEecCCCchhhh
Confidence 999999999999996 899999999999999999999999887644
No 9
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.96 E-value=1.9e-28 Score=251.85 Aligned_cols=307 Identities=12% Similarity=0.089 Sum_probs=203.2
Q ss_pred CeEEEEeCCC----CCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhH------------------H---hcCCeEE
Q 005746 243 RKFILIFHEL----SMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE------------------L---ARRKIKV 297 (679)
Q Consensus 243 rKILlI~heL----smgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~E------------------L---~rrgIkV 297 (679)
|||++|.+++ ..||++..+.+||++|.+.||+|++++.... +..+. + ...|++|
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 79 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFP-DIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGI 79 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCH-HHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCcc-ccccccccceeEEEecccCCcEEEEEEEECCcEE
Confidence 6899999987 4699999999999999999999999986532 11111 1 0257777
Q ss_pred EEcCC-------C--c-------------c---h-------hh----hcCcCEEEEcchhHHHHHHHHHHhcCCCCccEE
Q 005746 298 LEDRG-------E--P-------------S---F-------KT----SMKADLVIAGSAVCATWIDQYITRFPAGGSQVV 341 (679)
Q Consensus 298 l~~r~-------~--~-------------s---f-------k~----~~kaDLVia~Sav~aswI~qyia~~pag~s~Vv 341 (679)
+.... . . . + .. ..++|+||+|+..++ ++..+++.. ....+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~-~~~~~~~~~-~~~~p~v 157 (485)
T 2qzs_A 80 YLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAG-LAPAYLAAR-GRPAKSV 157 (485)
T ss_dssp EEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGT-THHHHHHHT-TCSSEEE
T ss_pred EEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchh-HHHHHHhhc-cCCCCEE
Confidence 64210 0 0 0 1 01 158999999975432 222223211 2234577
Q ss_pred EeeehhhH----------------H--------HH---HHHHHHhhcCCEEEEechhhHHHHHHHHHHhhccC-------
Q 005746 342 WWIMENRR----------------E--------YF---DRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKL------- 387 (679)
Q Consensus 342 WwI~E~rr----------------e--------Yf---dr~k~vl~rvk~LIfvSesq~k~w~~~~~eegi~l------- 387 (679)
+.+|.... . ++ ...+.++..++.+|++|+...+..... ..++.+
T Consensus 158 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~--~~~~~~~~~~~~~ 235 (485)
T 2qzs_A 158 FTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEP--QFAYGMEGLLQQR 235 (485)
T ss_dssp EEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSH--HHHTTCHHHHHHH
T ss_pred EEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHhcc--ccCcchHHHHHhh
Confidence 77775310 0 00 112455678999999999887763221 022211
Q ss_pred C--CCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCC--CCEEEEEEeccCCCCCHHHHHH
Q 005746 388 R--SQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTD--QDMLVLSLSSINPGKGQLLLVE 463 (679)
Q Consensus 388 ~--sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d--~d~LVlsvGrInp~KGq~lLLe 463 (679)
+ .++.|||||++.+.+...... .+ ...|+...+ +.+...+..+|+++|+++ +.++|+++|++.+.||++.|++
T Consensus 236 ~~~~~~~vi~ngvd~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~ 312 (485)
T 2qzs_A 236 HREGRLSGVLNGVDEKIWSPETDL-LL-ASRYTRDTL-EDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLE 312 (485)
T ss_dssp HHTTCEEECCCCCCTTTSCTTTCT-TS-SSCCCTTCG-GGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHH
T ss_pred ccCCceEEEecCCCccccCccccc-cc-cccccccch-hHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHH
Confidence 1 468999999987643211000 00 001111112 122345678899999987 7799999999999999999999
Q ss_pred HHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCcccccccccccccccccccccccCCCCccc
Q 005746 464 SAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFT 543 (679)
Q Consensus 464 A~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 543 (679)
|++.+.++ +
T Consensus 313 a~~~l~~~--~--------------------------------------------------------------------- 321 (485)
T 2qzs_A 313 ALPGLLEQ--G--------------------------------------------------------------------- 321 (485)
T ss_dssp HHHHHHHT--T---------------------------------------------------------------------
T ss_pred HHHHHhhC--C---------------------------------------------------------------------
Confidence 99988641 1
Q ss_pred ccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEE-ECCCchhH-HHHH
Q 005746 544 SIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAML-WTPATTRV-ASLY 621 (679)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~-ftG~~tdV-asly 621 (679)
++++++| .+. . ..++.++.++++++ ++|. |+|...+. +.+|
T Consensus 322 -----------------------------~~l~ivG---~g~--~-~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~ 364 (485)
T 2qzs_A 322 -----------------------------GQLALLG---AGD--P-VLQEGFLAAAAEYP--GQVGVQIGYHEAFSHRIM 364 (485)
T ss_dssp -----------------------------CEEEEEE---EEC--H-HHHHHHHHHHHHST--TTEEEEESCCHHHHHHHH
T ss_pred -----------------------------cEEEEEe---CCc--h-HHHHHHHHHHHhCC--CcEEEeCCCCHHHHHHHH
Confidence 2346554 331 1 24556777777664 7885 99997665 8999
Q ss_pred HHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccCCCCC
Q 005746 622 SAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTSG 667 (679)
Q Consensus 622 sAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~~~~ 667 (679)
++|||+|+||. .|+||++++||||||+|||+|++|+.++...+|
T Consensus 365 ~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~ 408 (485)
T 2qzs_A 365 GGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDC 408 (485)
T ss_dssp HHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBC
T ss_pred HhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCCccceeccC
Confidence 99999999996 899999999999999999999999988766654
No 10
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.96 E-value=1.8e-28 Score=245.89 Aligned_cols=282 Identities=18% Similarity=0.172 Sum_probs=194.7
Q ss_pred CeEEEEeCCCC-CCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEE--------cCC--Ccc------
Q 005746 243 RKFILIFHELS-MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLE--------DRG--EPS------ 305 (679)
Q Consensus 243 rKILlI~heLs-mgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~--------~r~--~~s------ 305 (679)
|||++|.+... .||++..+.+||.+|.+. |+|++++....|... ...+..+. ... ...
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 75 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSV----HANIEEFDAQTAEHVRGLNEQGFYYSGLSE 75 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCS----CSSSEEEEHHHHHHHTTCCSTTCCHHHHHH
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCccc----ccccccCCccccccccccccccchHHHHHH
Confidence 68999987665 588899999999999999 999999877654211 00111100 000 111
Q ss_pred hhhhcCcCEEEEcchhH--HHHHHHHHHhcCCCCccEEEeeehhhHHHHHHHHHHhhcCC--EEEEechhhHHHHHHHHH
Q 005746 306 FKTSMKADLVIAGSAVC--ATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVK--LLVFLSESQTKQWLTWCE 381 (679)
Q Consensus 306 fk~~~kaDLVia~Sav~--aswI~qyia~~pag~s~VvWwI~E~rreYfdr~k~vl~rvk--~LIfvSesq~k~w~~~~~ 381 (679)
+....++|+||+++... +.++.. +...|... .++.+.+..........+.++.+++ .+|++|+...+.+ .
T Consensus 76 ~l~~~~~Div~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~S~~~~~~~----~ 149 (413)
T 3oy2_A 76 FIDVHKPDIVMIYNDPIVIGNYLLA-MGKCSHRT-KIVLYVDLVSKNIRENLWWIFSHPKVVGVMAMSKCWISDI----C 149 (413)
T ss_dssp HHHHHCCSEEEEEECHHHHHHHHHH-GGGCCSCC-EEEEEECCCSBSCCGGGGGGGGCTTEEEEEESSTHHHHHH----H
T ss_pred HHHhcCCCEEEEcchHHHHHHHHHH-hccCCCCC-ceeeeccccchhhHHHHHHHHhccCCceEEEcCHHHHHHH----H
Confidence 11245899999985432 112111 12333332 2333333211111111245677766 9999999988774 3
Q ss_pred HhhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCC--CCEEEEEEeccCCCCCHH
Q 005746 382 EEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTD--QDMLVLSLSSINPGKGQL 459 (679)
Q Consensus 382 eegi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d--~d~LVlsvGrInp~KGq~ 459 (679)
+.++ +.+..|||+|++.+. | ...|+++|+++ +.++|+++|++.+.||++
T Consensus 150 ~~~~--~~~~~vi~ngvd~~~--------------~-------------~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~ 200 (413)
T 3oy2_A 150 NYGC--KVPINIVSHFVDTKT--------------I-------------YDARKLVGLSEYNDDVLFLNMNRNTARKRLD 200 (413)
T ss_dssp HTTC--CSCEEECCCCCCCCC--------------C-------------TTHHHHTTCGGGTTSEEEECCSCSSGGGTHH
T ss_pred HcCC--CCceEEeCCCCCHHH--------------H-------------HHHHHhcCCCcccCceEEEEcCCCchhcCcH
Confidence 3454 457899999987542 2 12567889988 899999999999999999
Q ss_pred HHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCcccccccccccccccccccccccCCC
Q 005746 460 LLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSP 539 (679)
Q Consensus 460 lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (679)
.|++|++.+.++.|+
T Consensus 201 ~li~a~~~l~~~~~~----------------------------------------------------------------- 215 (413)
T 3oy2_A 201 IYVLAAARFISKYPD----------------------------------------------------------------- 215 (413)
T ss_dssp HHHHHHHHHHHHCTT-----------------------------------------------------------------
T ss_pred HHHHHHHHHHHhCCC-----------------------------------------------------------------
Confidence 999999998776543
Q ss_pred CcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCc-------EEECC
Q 005746 540 SLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKA-------MLWTP 612 (679)
Q Consensus 540 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~-------V~ftG 612 (679)
++++++| -|... ....+++.++.+++++|+.++ |.|+|
T Consensus 216 ---------------------------------~~l~ivG-~g~~~-~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g 260 (413)
T 3oy2_A 216 ---------------------------------AKVRFLC-NSHHE-SKFDLHSIALRELVASGVDNVFTHLNKIMINRT 260 (413)
T ss_dssp ---------------------------------CCEEEEE-ECCTT-CSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECS
T ss_pred ---------------------------------cEEEEEe-CCccc-chhhHHHHHHHHHHHcCcccccccccceeeccC
Confidence 2346555 23211 112245677778888999997 89999
Q ss_pred Cc--hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccCCCC
Q 005746 613 AT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTS 666 (679)
Q Consensus 613 ~~--tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~~~ 666 (679)
+. +++..+|++||++|+||. .|+||++++||||||+|||+|++++.++...+
T Consensus 261 ~~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~ 314 (413)
T 3oy2_A 261 VLTDERVDMMYNACDVIVNCSS--GEGFGLCSAEGAVLGKPLIISAVGGADDYFSG 314 (413)
T ss_dssp CCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHTTTCCEEEECCHHHHHHSCT
T ss_pred cCCHHHHHHHHHhCCEEEeCCC--cCCCCcHHHHHHHcCCCEEEcCCCChHHHHcc
Confidence 94 599999999999999996 89999999999999999999999997776554
No 11
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.94 E-value=1.1e-26 Score=227.80 Aligned_cols=255 Identities=16% Similarity=0.090 Sum_probs=176.4
Q ss_pred CCCCeEEEEeCC--------------CCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcc
Q 005746 240 VWSRKFILIFHE--------------LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS 305 (679)
Q Consensus 240 ~~~rKILlI~he--------------LsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~s 305 (679)
|..|||++|.+. ...||++..+.+|+.+|.+.||+|++++..... .. ..+++++.......
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~-~~----~~~~~~~~~~~~~~ 75 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSP-AG----RPGLTVVPAGEPEE 75 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSC-CC----STTEEECSCCSHHH
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCC-CC----CCcceeccCCcHHH
Confidence 345899999998 246999999999999999999999988654322 21 24667665432211
Q ss_pred h---hhhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhhHHHHHHHHHHhhcCCEEEEechhhHHHHHHHHHH
Q 005746 306 F---KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEE 382 (679)
Q Consensus 306 f---k~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~rreYfdr~k~vl~rvk~LIfvSesq~k~w~~~~~e 382 (679)
+ ....++|+||+++.....+ .....+ .+ ++++|.....+ ..++.+|++|+...+.+..
T Consensus 76 l~~~l~~~~~Dvi~~~~~~~~~~-----~~~~~~-~p-v~~~h~~~~~~--------~~~d~ii~~S~~~~~~~~~---- 136 (342)
T 2iuy_A 76 IERWLRTADVDVVHDHSGGVIGP-----AGLPPG-TA-FISSHHFTTRP--------VNPVGCTYSSRAQRAHCGG---- 136 (342)
T ss_dssp HHHHHHHCCCSEEEECSSSSSCS-----TTCCTT-CE-EEEEECSSSBC--------SCCTTEEESCHHHHHHTTC----
T ss_pred HHHHHHhcCCCEEEECCchhhHH-----HHhhcC-CC-EEEecCCCCCc--------ccceEEEEcCHHHHHHHhc----
Confidence 1 1235899999987532211 111223 34 67777653221 1278899999988776321
Q ss_pred hhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEeccCCCCCHHHHH
Q 005746 383 EKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLV 462 (679)
Q Consensus 383 egi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGrInp~KGq~lLL 462 (679)
..+..|||++++.+.+ .+.. . .. +++.+|+++|++.+.||++.|+
T Consensus 137 -----~~~~~vi~ngvd~~~~--------------~~~~---------~------~~-~~~~~i~~vG~~~~~Kg~~~li 181 (342)
T 2iuy_A 137 -----GDDAPVIPIPVDPARY--------------RSAA---------D------QV-AKEDFLLFMGRVSPHKGALEAA 181 (342)
T ss_dssp -----CTTSCBCCCCBCGGGS--------------CCST---------T------CC-CCCSCEEEESCCCGGGTHHHHH
T ss_pred -----CCceEEEcCCCChhhc--------------Cccc---------c------cC-CCCCEEEEEeccccccCHHHHH
Confidence 3468899999986532 1110 0 12 2445789999999999999999
Q ss_pred HHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCcccccccccccccccccccccccCCCCcc
Q 005746 463 ESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLF 542 (679)
Q Consensus 463 eA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 542 (679)
+|++.+ +
T Consensus 182 ~a~~~~-----~-------------------------------------------------------------------- 188 (342)
T 2iuy_A 182 AFAHAC-----G-------------------------------------------------------------------- 188 (342)
T ss_dssp HHHHHH-----T--------------------------------------------------------------------
T ss_pred HHHHhc-----C--------------------------------------------------------------------
Confidence 999875 1
Q ss_pred cccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCch--hHHHH
Q 005746 543 TSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATT--RVASL 620 (679)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~t--dVasl 620 (679)
..++ ++|.+. .. +.++.+++.++ ++|.|+|+.+ ++..+
T Consensus 189 ------------------------------~~l~---i~G~g~-~~----~~l~~~~~~~~--~~v~~~g~~~~~~l~~~ 228 (342)
T 2iuy_A 189 ------------------------------RRLV---LAGPAW-EP----EYFDEITRRYG--STVEPIGEVGGERRLDL 228 (342)
T ss_dssp ------------------------------CCEE---EESCCC-CH----HHHHHHHHHHT--TTEEECCCCCHHHHHHH
T ss_pred ------------------------------cEEE---EEeCcc-cH----HHHHHHHHHhC--CCEEEeccCCHHHHHHH
Confidence 1134 356653 22 33444555555 8999999976 45999
Q ss_pred HHHcCEEEEcCC--------CCCCCccHHHHHHHHcCCCEEEeCCCCCccCCCC
Q 005746 621 YSAADVYVINSQ--------GLGETFGRVTIEAMAFGVPKNISQIELSRKDPTS 666 (679)
Q Consensus 621 ysAADV~VlpSq--------~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~~~ 666 (679)
|++||++|+||. +..|+||++++||||||+|||+|++++.++...+
T Consensus 229 ~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~ 282 (342)
T 2iuy_A 229 LASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPS 282 (342)
T ss_dssp HHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGG
T ss_pred HHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcc
Confidence 999999999994 0179999999999999999999999998875544
No 12
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.94 E-value=4.2e-25 Score=238.99 Aligned_cols=199 Identities=12% Similarity=0.129 Sum_probs=138.1
Q ss_pred HHHhhcCCEEEEechhhHHHHHHHHHHhhc-----cCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHH
Q 005746 356 KLVLDRVKLLVFLSESQTKQWLTWCEEEKL-----KLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLR 430 (679)
Q Consensus 356 k~vl~rvk~LIfvSesq~k~w~~~~~eegi-----~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR 430 (679)
+..+..++.++++|+..++...+.. ..+. .-..++.+||||||.+.+...... .+. ..+......+.+...+
T Consensus 236 k~~i~~ad~v~tVS~~~a~ei~~~~-~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~-~~~-~~~~~~~~~~~K~~~k 312 (536)
T 3vue_A 236 KAGILEADRVLTVSPYYAEELISGI-ARGCELDNIMRLTGITGIVNGMDVSEWDPSKDK-YIT-AKYDATTAIEAKALNK 312 (536)
T ss_dssp HHHHHHCSEEEESCHHHHHHHHTTC-CCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCS-SSS-CCCCTTTHHHHHHHHH
T ss_pred HHHHHhccEEEEcCHHHhhhhhccc-ccccccccccccCCeEEEECCcchhhcCCCCcc-ccc-cccchhhhhhhhHHHH
Confidence 4456678999999998776633210 1111 112468999999987754322110 111 1122222234445667
Q ss_pred HHHHHHcCCC--CCCEEEEEEeccCCCCCHHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccc
Q 005746 431 DSVRKEMGLT--DQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMS 508 (679)
Q Consensus 431 ~svRkelGL~--d~d~LVlsvGrInp~KGq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~ 508 (679)
..+++++||+ ++.++|+++||+.++||+++|++|++.+.++.
T Consensus 313 ~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~------------------------------------ 356 (536)
T 3vue_A 313 EALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQED------------------------------------ 356 (536)
T ss_dssp HHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSS------------------------------------
T ss_pred HHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhC------------------------------------
Confidence 8899999996 45689999999999999999999999875421
Q ss_pred cccCCcccccccccccccccccccccccCCCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCCh
Q 005746 509 DDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKV 588 (679)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~ 588 (679)
..++++ |.|. .
T Consensus 357 ----------------------------------------------------------------~~l~l~---G~G~--~ 367 (536)
T 3vue_A 357 ----------------------------------------------------------------VQIVLL---GTGK--K 367 (536)
T ss_dssp ----------------------------------------------------------------CEEEEE---CCBC--H
T ss_pred ----------------------------------------------------------------CeEEEE---eccC--c
Confidence 123433 4432 2
Q ss_pred HHHHHHHHHHHHhCCCCCcEEECCC--chhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccCCCC
Q 005746 589 PYVKEILEFLSQHSNLSKAMLWTPA--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTS 666 (679)
Q Consensus 589 ~y~k~~L~~L~~~lnLs~~V~ftG~--~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~~~ 666 (679)
.....++.+.. +++.+|.|++. .+++..+|++||+||+||+ .|+||+|++||||||+|||+|++||.++-+.+
T Consensus 368 -~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~--~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~d 442 (536)
T 3vue_A 368 -KFEKLLKSMEE--KYPGKVRAVVKFNAPLAHLIMAGADVLAVPSR--FEPCGLIQLQGMRYGTPCACASTGGLVDTVIE 442 (536)
T ss_dssp -HHHHHHHHHHH--HSTTTEEEECSCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHTTCCEEECSCTHHHHHCCB
T ss_pred -hHHHHHHHHHh--hcCCceEEEEeccHHHHHHHHHhhheeecccc--cCCCCHHHHHHHHcCCCEEEcCCCCchheeeC
Confidence 23444555554 45678888776 4678899999999999996 89999999999999999999999998875554
Q ss_pred C
Q 005746 667 G 667 (679)
Q Consensus 667 ~ 667 (679)
|
T Consensus 443 g 443 (536)
T 3vue_A 443 G 443 (536)
T ss_dssp T
T ss_pred C
Confidence 3
No 13
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.93 E-value=4e-25 Score=218.81 Aligned_cols=278 Identities=17% Similarity=0.138 Sum_probs=183.5
Q ss_pred CCeEEEEeCCCC--CCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcC--C-----Ccc------h
Q 005746 242 SRKFILIFHELS--MTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDR--G-----EPS------F 306 (679)
Q Consensus 242 ~rKILlI~heLs--mgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r--~-----~~s------f 306 (679)
.|||++|.+... .||++..+.+|+.+|.+.||+|++++......-.+++.....+++..+ . ... +
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 99 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPATHRKV 99 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHHHHHHH
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHHHHHHH
Confidence 479999998763 489999999999999999999998876554331222211111222111 0 000 1
Q ss_pred ---hhhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhhH------HHHHHHHHHhhcCCEEEEechhhHHHHH
Q 005746 307 ---KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR------EYFDRAKLVLDRVKLLVFLSESQTKQWL 377 (679)
Q Consensus 307 ---k~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~rr------eYfdr~k~vl~rvk~LIfvSesq~k~w~ 377 (679)
....++|+||++......+ ..++... . ..++++++|.... .+....+.++.+++.+|++|+...+.+.
T Consensus 100 ~~~l~~~~~Dii~~~~~~~~~~-~~~~~~~-~-~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 176 (406)
T 2gek_A 100 KKWIAEGDFDVLHIHEPNAPSL-SMLALQA-A-EGPIVATFHTSTTKSLTLSVFQGILRPYHEKIIGRIAVSDLARRWQM 176 (406)
T ss_dssp HHHHHHHCCSEEEEECCCSSSH-HHHHHHH-E-ESSEEEEECCCCCSHHHHHHHHSTTHHHHTTCSEEEESSHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCccchHH-HHHHHHh-c-CCCEEEEEcCcchhhhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHH
Confidence 1234899999986433222 1112211 1 2356777776421 1111122567889999999998887754
Q ss_pred HHHHHhhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEecc-CCCC
Q 005746 378 TWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSI-NPGK 456 (679)
Q Consensus 378 ~~~~eegi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGrI-np~K 456 (679)
. ++.. .+. +||++++.+.+.... .+.+++++...|+++|++ .+.|
T Consensus 177 ~-----~~~~-~~~-vi~~~v~~~~~~~~~---------------------------~~~~~~~~~~~i~~~G~~~~~~K 222 (406)
T 2gek_A 177 E-----ALGS-DAV-EIPNGVDVASFADAP---------------------------LLDGYPREGRTVLFLGRYDEPRK 222 (406)
T ss_dssp H-----HHSS-CEE-ECCCCBCHHHHHTCC---------------------------CCTTCSCSSCEEEEESCTTSGGG
T ss_pred H-----hcCC-CcE-EecCCCChhhcCCCc---------------------------hhhhccCCCeEEEEEeeeCcccc
Confidence 3 2222 246 999999876432110 011334456799999999 9999
Q ss_pred CHHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCccccccccccccccccccccccc
Q 005746 457 GQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNL 536 (679)
Q Consensus 457 Gq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (679)
|++.|++|++.+.++.|+
T Consensus 223 g~~~li~a~~~l~~~~~~-------------------------------------------------------------- 240 (406)
T 2gek_A 223 GMAVLLAALPKLVARFPD-------------------------------------------------------------- 240 (406)
T ss_dssp CHHHHHHHHHHHHTTSTT--------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHHCCC--------------------------------------------------------------
Confidence 999999999998764432
Q ss_pred CCCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCch-
Q 005746 537 LSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATT- 615 (679)
Q Consensus 537 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~t- 615 (679)
+.++ ++|.+. + +.++.+++.+ .++|.|+|+.+
T Consensus 241 ------------------------------------~~l~---i~G~~~----~--~~l~~~~~~~--~~~v~~~g~~~~ 273 (406)
T 2gek_A 241 ------------------------------------VEIL---IVGRGD----E--DELREQAGDL--AGHLRFLGQVDD 273 (406)
T ss_dssp ------------------------------------CEEE---EESCSC----H--HHHHHHTGGG--GGGEEECCSCCH
T ss_pred ------------------------------------eEEE---EEcCCc----H--HHHHHHHHhc--cCcEEEEecCCH
Confidence 2345 356653 1 3445555544 78999999975
Q ss_pred -hHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccCCCC
Q 005746 616 -RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTS 666 (679)
Q Consensus 616 -dVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~~~ 666 (679)
++..+|++||++|+||. ..|+||++++||||||+|||+|+.++.++...+
T Consensus 274 ~~~~~~~~~adv~v~ps~-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~ 324 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVLAD 324 (406)
T ss_dssp HHHHHHHHHSSEEEECCC-SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTT
T ss_pred HHHHHHHHHCCEEEecCC-CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcC
Confidence 55999999999999994 389999999999999999999999988765543
No 14
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.91 E-value=2.5e-23 Score=217.06 Aligned_cols=276 Identities=11% Similarity=0.099 Sum_probs=173.5
Q ss_pred CCeEEEEeCCCCCC---CHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhc-CCeEE-------------EEcCCC-
Q 005746 242 SRKFILIFHELSMT---GAPLSMMELATELLSCGATVSAVVLSKRGGLMPELAR-RKIKV-------------LEDRGE- 303 (679)
Q Consensus 242 ~rKILlI~heLsmg---GAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~r-rgIkV-------------l~~r~~- 303 (679)
+|||+++...+..+ |+...+.+||++|.++||+|++++...... .+...+ .+... +.....
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 124 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPN-PKDLQSFKSFKYVMPEEDKDFALQIVPFNDRY 124 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSCCCC-HHHHGGGTTSEECCTTCCCCCSEEEEECSCCT
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecCCCC-hHHHHhhhccceeeccCCccccceeeeccccc
Confidence 48999999999864 787889999999999999999998653221 111111 11111 111000
Q ss_pred cchhhhcCcCEEEEcchhHHHHHHHHH---Hh-cCCCCccEEEeeehhhHHHH------HHHHHHhhcCC--EEEEechh
Q 005746 304 PSFKTSMKADLVIAGSAVCATWIDQYI---TR-FPAGGSQVVWWIMENRREYF------DRAKLVLDRVK--LLVFLSES 371 (679)
Q Consensus 304 ~sfk~~~kaDLVia~Sav~aswI~qyi---a~-~pag~s~VvWwI~E~rreYf------dr~k~vl~rvk--~LIfvSes 371 (679)
.......++|+||+++...+.+..... .+ ......+.++.++.....++ ...+..+.+.+ .+|++|+.
T Consensus 125 ~~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 204 (413)
T 2x0d_A 125 NRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQIAVFNSEL 204 (413)
T ss_dssp TCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGGGSCSSHHHHHHHHTTSCCSCEEEEEESHH
T ss_pred cccccCCCCCEEEEehHHHHHHHHHhhhhhhhhcccccCcEEEEEeechhhcCccChHHHHHHHHhccCCceEEEEcCHH
Confidence 000012469999998754333222211 11 11112234555544322111 11233344443 47888998
Q ss_pred hHHHHHHHHHHhhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEec
Q 005746 372 QTKQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSS 451 (679)
Q Consensus 372 q~k~w~~~~~eegi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGr 451 (679)
..+.. .+.|+.. .+..++|++++.+.+.. + ..+ .+++..|+++|+
T Consensus 205 ~~~~l----~~~g~~~-~~~~~i~~g~d~~~~~~----------------------------~-~~~-~~~~~~il~~gr 249 (413)
T 2x0d_A 205 LKQYF----NNKGYNF-TDEYFFQPKINTTLKNY----------------------------I-NDK-RQKEKIILVYGR 249 (413)
T ss_dssp HHHHH----HHHTCCC-SEEEEECCCCCHHHHTT----------------------------T-TSC-CCCCSEEEEEEC
T ss_pred HHHHH----HHcCCCC-CceEEeCCCcCchhhcc----------------------------c-ccc-cCCCCEEEEEec
Confidence 88763 3345543 35789999997653210 0 112 234556788999
Q ss_pred c-CCCCCHHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCccccccccccccccccc
Q 005746 452 I-NPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNE 530 (679)
Q Consensus 452 I-np~KGq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (679)
+ .+.||+++|++|++.+.++.|+.
T Consensus 250 ~~~~~Kg~~~li~A~~~l~~~~~~~------------------------------------------------------- 274 (413)
T 2x0d_A 250 PSVKRNAFTLIVEALKIFVQKYDRS------------------------------------------------------- 274 (413)
T ss_dssp TTCGGGCHHHHHHHHHHHHHHCTTG-------------------------------------------------------
T ss_pred CchhccCHHHHHHHHHHHHHhCCCC-------------------------------------------------------
Confidence 6 78999999999999987655420
Q ss_pred ccccccCCCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEE
Q 005746 531 PVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLW 610 (679)
Q Consensus 531 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~f 610 (679)
++.++++ +|++..+ .++++.++|.|
T Consensus 275 ----------------------------------------~~~~l~i---vG~~~~~------------~~l~~~~~v~f 299 (413)
T 2x0d_A 275 ----------------------------------------NEWKIIS---VGEKHKD------------IALGKGIHLNS 299 (413)
T ss_dssp ----------------------------------------GGCEEEE---EESCCCC------------EEEETTEEEEE
T ss_pred ----------------------------------------CceEEEE---EcCCchh------------hhcCCcCcEEE
Confidence 0134454 4544221 24678889999
Q ss_pred CCC--chhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccCCCC
Q 005746 611 TPA--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTS 666 (679)
Q Consensus 611 tG~--~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~~~ 666 (679)
+|. .++++.+|++|||||+||. .|+||+|++||||||+|||+++. +..+-+.+
T Consensus 300 ~G~~~~~~l~~~~~~adv~v~pS~--~E~~g~~~lEAmA~G~PVV~~~~-g~~e~v~~ 354 (413)
T 2x0d_A 300 LGKLTLEDYADLLKRSSIGISLMI--SPHPSYPPLEMAHFGLRVITNKY-ENKDLSNW 354 (413)
T ss_dssp EESCCHHHHHHHHHHCCEEECCCS--SSSCCSHHHHHHHTTCEEEEECB-TTBCGGGT
T ss_pred cCCCCHHHHHHHHHhCCEEEEecC--CCCCCcHHHHHHhCCCcEEEeCC-Ccchhhhc
Confidence 999 4799999999999999995 89999999999999999999765 45554444
No 15
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.91 E-value=7e-24 Score=241.75 Aligned_cols=343 Identities=14% Similarity=0.183 Sum_probs=209.4
Q ss_pred ceeeccCCcchhhhccc---------cccccccccCCcccccccCCCCeEEEEe-CCC----------CCCCHHHHHH--
Q 005746 205 GLLVGPFGLTEDRILEW---------SPEKRSGTCDRKGDFARFVWSRKFILIF-HEL----------SMTGAPLSMM-- 262 (679)
Q Consensus 205 g~~~gp~~~~e~~~l~~---------s~~~~~~~c~~k~~f~~~~~~rKILlI~-heL----------smgGAplsmm-- 262 (679)
||--| +|.+-.|++|. +|. .|.=..=++|+.+..+|++|. |.+ ..||...+++
T Consensus 237 ~~~~~-~~~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~ 311 (816)
T 3s28_A 237 GLERG-WGDNAERVLDMIRLLLDLLEAPD----PCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQ 311 (816)
T ss_dssp TBCBC-SCSBHHHHHHHHHHHHHHHHSCC----HHHHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHH
T ss_pred CCCCC-cCCcHHHHHHHHHHHHHHhcCCC----cccHHHHhccCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHH
Confidence 44444 66666666653 222 344455678888889999886 443 2456678888
Q ss_pred ------HHHHHHHHCCCeEE----EEEeCCCCC----ChhHHhc----CCeEEEEcCCCc-------------------c
Q 005746 263 ------ELATELLSCGATVS----AVVLSKRGG----LMPELAR----RKIKVLEDRGEP-------------------S 305 (679)
Q Consensus 263 ------eLAteL~s~G~~Vs----aVvLs~~Gg----L~~EL~r----rgIkVl~~r~~~-------------------s 305 (679)
+||+.|.++||+|+ +++-..... ..+++.. .|++|+..+... .
T Consensus 312 ~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~ 391 (816)
T 3s28_A 312 VRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLET 391 (816)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHH
T ss_pred HHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHH
Confidence 47777788999885 554332211 1111111 367776432110 1
Q ss_pred hh----------hhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhhHH---------------H-H----HHH
Q 005746 306 FK----------TSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRRE---------------Y-F----DRA 355 (679)
Q Consensus 306 fk----------~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~rre---------------Y-f----dr~ 355 (679)
|. ...++|+||+|...+ .++..+++.. .+ .++++.+|..... | + ...
T Consensus 392 F~~~~l~~il~~~~~~PDVIHsH~~~s-glva~llar~-~g-vP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE 468 (816)
T 3s28_A 392 YTEDAAVELSKELNGKPDLIIGNYSDG-NLVASLLAHK-LG-VTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTAD 468 (816)
T ss_dssp HHHHHHHHHHHHCSSCCSEEEEEHHHH-HHHHHHHHHH-HT-CCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCeEEEeCCchH-HHHHHHHHHH-cC-CCEEEEEecccccccccccchhhhHHHHHHHHHHHHHH
Confidence 11 013699999997543 2333333321 12 2355556643211 1 0 012
Q ss_pred HHHhhcCCEEEEechhhHHHHHH----HHHHhhccC-------------CCCcEEeeCCCchhhhhhhccccCCCCCCCC
Q 005746 356 KLVLDRVKLLVFLSESQTKQWLT----WCEEEKLKL-------------RSQPAVVPLSVNDELAFVAGFTCSLNTPTSS 418 (679)
Q Consensus 356 k~vl~rvk~LIfvSesq~k~w~~----~~~eegi~l-------------~sq~~VVP~gVndElafvagi~~slntp~fs 418 (679)
+.+++.++.+|++|+...+...+ +....+... ..++.|||+|||.+.+...... .....
T Consensus 469 ~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~----~~Rl~ 544 (816)
T 3s28_A 469 IFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEE----KRRLT 544 (816)
T ss_dssp HHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCT----TTCCG
T ss_pred HHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchh----hhhhh
Confidence 23678899999999887663110 011011111 1278999999987654321100 00000
Q ss_pred hhhHHHhhHHH------HHHHHHHcCC--CCCCEEEEEEeccCCCCCHHHHHHHHHHHHHhCCCCchhhhhhcccccccc
Q 005746 419 PEKMREKRNLL------RDSVRKEMGL--TDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKK 490 (679)
Q Consensus 419 pek~~ekr~~l------R~svRkelGL--~d~d~LVlsvGrInp~KGq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~ 490 (679)
.. .... ....++.+|+ +++.++|+++|++.+.||++.|++|++.+.+..+
T Consensus 545 --~~---~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~----------------- 602 (816)
T 3s28_A 545 --KF---HSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRE----------------- 602 (816)
T ss_dssp --GG---HHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHH-----------------
T ss_pred --hc---cccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCC-----------------
Confidence 00 0000 1123567888 7788999999999999999999999998765322
Q ss_pred cccccccccccccccccccccCCcccccccccccccccccccccccCCCCcccccCCCCccccCCccchhhhcccccccc
Q 005746 491 SSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQ 570 (679)
Q Consensus 491 ~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 570 (679)
T Consensus 603 -------------------------------------------------------------------------------- 602 (816)
T 3s28_A 603 -------------------------------------------------------------------------------- 602 (816)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEEEEEEeeCCCCC----C--hHHHHHHHHHHHHhCCCCCcEEECCCc------hhHHHHHH-HcCEEEEcCCCCCCC
Q 005746 571 QQALKILIGSVGSKSN----K--VPYVKEILEFLSQHSNLSKAMLWTPAT------TRVASLYS-AADVYVINSQGLGET 637 (679)
Q Consensus 571 ~~a~lvLiG~VGs~sn----k--~~y~k~~L~~L~~~lnLs~~V~ftG~~------tdVaslys-AADV~VlpSq~~~Eg 637 (679)
++.+++ +|.+.+ . ..-..+.++.+++++++.++|.|+|+. .++..+|+ +|||||+||. .|+
T Consensus 603 -~v~LvI---vG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~Eg 676 (816)
T 3s28_A 603 -LANLVV---VGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEA 676 (816)
T ss_dssp -HCEEEE---ECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBS
T ss_pred -CeEEEE---EeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccC
Confidence 234564 455431 0 111345567788889999999999975 45788888 6899999996 899
Q ss_pred ccHHHHHHHHcCCCEEEeCCCCCccCCCCC
Q 005746 638 FGRVTIEAMAFGVPKNISQIELSRKDPTSG 667 (679)
Q Consensus 638 FGrV~IEAMA~GlPVV~S~~g~~r~~~~~~ 667 (679)
||++++||||||+|||+|++|+.++...+|
T Consensus 677 fglvllEAMA~G~PVIasd~GG~~EiV~dg 706 (816)
T 3s28_A 677 FGLTVVEAMTCGLPTFATCKGGPAEIIVHG 706 (816)
T ss_dssp SCHHHHHHHHTTCCEEEESSBTHHHHCCBT
T ss_pred ccHHHHHHHHcCCCEEEeCCCChHHHHccC
Confidence 999999999999999999999988765443
No 16
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.89 E-value=2.5e-23 Score=218.54 Aligned_cols=273 Identities=11% Similarity=0.078 Sum_probs=177.2
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHH--HHHCCCeEEEEEeCCC--CCChhHHhcCCeEEEEcCCCcc-----hhhhcCc
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATE--LLSCGATVSAVVLSKR--GGLMPELARRKIKVLEDRGEPS-----FKTSMKA 312 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAte--L~s~G~~VsaVvLs~~--GgL~~EL~rrgIkVl~~r~~~s-----fk~~~ka 312 (679)
++||+++++.+..+|++..+++|++. |.+.|++|++++.... +.+..++...+ .+........ +-...++
T Consensus 205 ~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~ 283 (568)
T 2vsy_A 205 PLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGSTLRTRLAQAS-TLHDVTALGHLATAKHIRHHGI 283 (568)
T ss_dssp CEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSCHHHHHHHHTS-EEEECTTCCHHHHHHHHHHTTC
T ss_pred CeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCCCccHHHHHHHhcC-eEEECCCCCHHHHHHHHHhCCC
Confidence 47999999999999999999999999 7888999998876432 23455666666 5554332111 1134689
Q ss_pred CEEEEcchhH-HHHHHHHHHhcCCCCccEEEeeehhhHHHHHHHHHHhh--cCCEEEEechhhHHHHHHHHHHhhccCCC
Q 005746 313 DLVIAGSAVC-ATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLD--RVKLLVFLSESQTKQWLTWCEEEKLKLRS 389 (679)
Q Consensus 313 DLVia~Sav~-aswI~qyia~~pag~s~VvWwI~E~rreYfdr~k~vl~--rvk~LIfvSesq~k~w~~~~~eegi~l~s 389 (679)
|+||.+.... ...+. .++..++. .++.|+-+..... . ..++ .++.+|++|+.... ...
T Consensus 284 Div~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~-~----~~~~~~~~d~~i~~s~~~~~------------~~~ 344 (568)
T 2vsy_A 284 DLLFDLRGWGGGGRPE-VFALRPAP-VQVNWLAYPGTSG-A----PWMDYVLGDAFALPPALEPF------------YSE 344 (568)
T ss_dssp SEEEECSSCTTCSSCH-HHHTCCSS-EEEEESSSSSCCC-C----TTCCEEEECTTTSCTTTGGG------------CSS
T ss_pred CEEEECCCCCCcchHH-HHhcCCCc-eeEeeecCCcccC-C----CCceEEEECCCcCCcccccC------------Ccc
Confidence 9998643211 00011 12222221 1233332211000 0 0011 13444555654322 124
Q ss_pred CcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEeccCCCCCHHHHHHHHHHHH
Q 005746 390 QPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMI 469 (679)
Q Consensus 390 q~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGrInp~KGq~lLLeA~~~li 469 (679)
++.+||+.+.... ..+...+ ...|+++|++++.++ +++|++.+ ||++.|++|+..+.
T Consensus 345 ~i~~ipn~~~~~~----------~~~~~~~-----------~~~r~~~~~~~~~~v-~~~g~~~~-K~~~~li~a~~~l~ 401 (568)
T 2vsy_A 345 HVLRLQGAFQPSD----------TSRVVAE-----------PPSRTQCGLPEQGVV-LCCFNNSY-KLNPQSMARMLAVL 401 (568)
T ss_dssp EEEECSSCSCCCC----------TTCCCCC-----------CCCTGGGTCCTTSCE-EEECCCGG-GCCHHHHHHHHHHH
T ss_pred eeEcCCCcCCCCC----------CCCCCCC-----------CCCccccCCCCCCEE-EEeCCccc-cCCHHHHHHHHHHH
Confidence 6788998432110 0000011 124678999877754 48999999 99999999999987
Q ss_pred HhCCCCchhhhhhcccccccccccccccccccccccccccccCCcccccccccccccccccccccccCCCCcccccCCCC
Q 005746 470 EQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTD 549 (679)
Q Consensus 470 eq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 549 (679)
++.|+
T Consensus 402 ~~~~~--------------------------------------------------------------------------- 406 (568)
T 2vsy_A 402 REVPD--------------------------------------------------------------------------- 406 (568)
T ss_dssp HHCTT---------------------------------------------------------------------------
T ss_pred HhCCC---------------------------------------------------------------------------
Confidence 76543
Q ss_pred ccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCC-CcEEECCCch--hHHHHHHHcCE
Q 005746 550 AVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLS-KAMLWTPATT--RVASLYSAADV 626 (679)
Q Consensus 550 ~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs-~~V~ftG~~t--dVaslysAADV 626 (679)
++++++|. ++. .++.++.+++.+|+. ++|+|+|+.+ ++..+|++|||
T Consensus 407 -----------------------~~l~i~G~--~g~-----~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv 456 (568)
T 2vsy_A 407 -----------------------SVLWLLSG--PGE-----ADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADL 456 (568)
T ss_dssp -----------------------CEEEEECC--STT-----HHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSE
T ss_pred -----------------------cEEEEecC--CHH-----HHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCE
Confidence 34564432 331 456677788889998 9999999984 99999999999
Q ss_pred EEEcCCCCCCCccHHHHHHHHcCCCEEE-------eCCC-------CCccCCC
Q 005746 627 YVINSQGLGETFGRVTIEAMAFGVPKNI-------SQIE-------LSRKDPT 665 (679)
Q Consensus 627 ~VlpSq~~~EgFGrV~IEAMA~GlPVV~-------S~~g-------~~r~~~~ 665 (679)
||+||. . +||++++||||||+|||+ |+++ +..+...
T Consensus 457 ~v~ps~--~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~ 506 (568)
T 2vsy_A 457 FLDTHP--Y-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNV 506 (568)
T ss_dssp EECCSS--S-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBC
T ss_pred EeeCCC--C-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhc
Confidence 999996 6 999999999999999999 9999 8776443
No 17
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.88 E-value=6e-21 Score=187.79 Aligned_cols=255 Identities=15% Similarity=0.069 Sum_probs=168.9
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCc------------ch----
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP------------SF---- 306 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~------------sf---- 306 (679)
+||+++.. +.||....+++||.+|.+.||+|++++... +...+.+...|++++...... .+
T Consensus 7 mkIl~~~~--~~gG~~~~~~~la~~L~~~G~~V~v~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (364)
T 1f0k_A 7 KRLMVMAG--GTGGHVFPGLAVAHHLMAQGWQVRWLGTAD-RMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFN 83 (364)
T ss_dssp CEEEEECC--SSHHHHHHHHHHHHHHHTTTCEEEEEECTT-STHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHH
T ss_pred cEEEEEeC--CCccchhHHHHHHHHHHHcCCEEEEEecCC-cchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHH
Confidence 79999863 457889999999999999999999876432 222234555688886543210 00
Q ss_pred --------hhhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhhHHHHHHHHHHhhcCCEEEEechhhHHHHHH
Q 005746 307 --------KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLT 378 (679)
Q Consensus 307 --------k~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~rreYfdr~k~vl~rvk~LIfvSesq~k~w~~ 378 (679)
....++|+||+++.... +....++.. .+ .+++++.|.....+.. +.+...++.+++.++..
T Consensus 84 ~~~~l~~~l~~~~pDvv~~~~~~~~-~~~~~~~~~-~~-~p~v~~~~~~~~~~~~--~~~~~~~d~v~~~~~~~------ 152 (364)
T 1f0k_A 84 AWRQARAIMKAYKPDVVLGMGGYVS-GPGGLAAWS-LG-IPVVLHEQNGIAGLTN--KWLAKIATKVMQAFPGA------ 152 (364)
T ss_dssp HHHHHHHHHHHHCCSEEEECSSTTH-HHHHHHHHH-TT-CCEEEEECSSSCCHHH--HHHTTTCSEEEESSTTS------
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcCc-hHHHHHHHH-cC-CCEEEEecCCCCcHHH--HHHHHhCCEEEecChhh------
Confidence 01248999999864321 111122221 12 2345555532111111 23445678888766532
Q ss_pred HHHHhhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEE-EEEeccCCCCC
Q 005746 379 WCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLV-LSLSSINPGKG 457 (679)
Q Consensus 379 ~~~eegi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LV-lsvGrInp~KG 457 (679)
++ +..+||++++.+.+. +. ..++++++++++.++ ++.|++.+.||
T Consensus 153 --------~~-~~~~i~n~v~~~~~~--------------~~-----------~~~~~~~~~~~~~~il~~~g~~~~~k~ 198 (364)
T 1f0k_A 153 --------FP-NAEVVGNPVRTDVLA--------------LP-----------LPQQRLAGREGPVRVLVVGGSQGARIL 198 (364)
T ss_dssp --------SS-SCEECCCCCCHHHHT--------------SC-----------CHHHHHTTCCSSEEEEEECTTTCCHHH
T ss_pred --------cC-CceEeCCccchhhcc--------------cc-----------hhhhhcccCCCCcEEEEEcCchHhHHH
Confidence 12 478999999875321 00 013567887777644 45569999999
Q ss_pred HHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCcccccccccccccccccccccccC
Q 005746 458 QLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLL 537 (679)
Q Consensus 458 q~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (679)
+++|++|++.+.+ +
T Consensus 199 ~~~li~a~~~l~~---~--------------------------------------------------------------- 212 (364)
T 1f0k_A 199 NQTMPQVAAKLGD---S--------------------------------------------------------------- 212 (364)
T ss_dssp HHHHHHHHHHHGG---G---------------------------------------------------------------
T ss_pred HHHHHHHHHHhcC---C---------------------------------------------------------------
Confidence 9999999987632 1
Q ss_pred CCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchhH
Q 005746 538 SPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRV 617 (679)
Q Consensus 538 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~tdV 617 (679)
..+++ ++|++. . +.++.++++++++ +|.|+|+.+++
T Consensus 213 -----------------------------------~~~l~--i~G~~~-----~-~~l~~~~~~~~~~-~v~~~g~~~~~ 248 (364)
T 1f0k_A 213 -----------------------------------VTIWH--QSGKGS-----Q-QSVEQAYAEAGQP-QHKVTEFIDDM 248 (364)
T ss_dssp -----------------------------------EEEEE--ECCTTC-----H-HHHHHHHHHTTCT-TSEEESCCSCH
T ss_pred -----------------------------------cEEEE--EcCCch-----H-HHHHHHHhhcCCC-ceEEecchhhH
Confidence 12222 367653 1 3455566677774 79999999999
Q ss_pred HHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCc
Q 005746 618 ASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSR 661 (679)
Q Consensus 618 aslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r 661 (679)
+.+|++||++|+|| + |++++||||||+|||+|++++..
T Consensus 249 ~~~~~~ad~~v~~s---g---~~~~~EAma~G~Pvi~~~~~g~~ 286 (364)
T 1f0k_A 249 AAAYAWADVVVCRS---G---ALTVSEIAAAGLPALFVPFQHKD 286 (364)
T ss_dssp HHHHHHCSEEEECC---C---HHHHHHHHHHTCCEEECCCCCTT
T ss_pred HHHHHhCCEEEECC---c---hHHHHHHHHhCCCEEEeeCCCCc
Confidence 99999999999999 3 99999999999999999999753
No 18
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.82 E-value=2.9e-19 Score=177.08 Aligned_cols=284 Identities=13% Similarity=0.104 Sum_probs=169.1
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCC-eEEEEEeCCCCCChhH-HhcCCeEE-EEcCCC---cc-----------
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGA-TVSAVVLSKRGGLMPE-LARRKIKV-LEDRGE---PS----------- 305 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~-~VsaVvLs~~GgL~~E-L~rrgIkV-l~~r~~---~s----------- 305 (679)
|||++++.+. ..-..+..|+.+|.+.|. +|.+++....++...+ +...++.. ++.... ..
T Consensus 1 mkIl~v~~~~---~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (384)
T 1vgv_A 1 MKVLTVFGTR---PEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEG 77 (384)
T ss_dssp CEEEEEECSH---HHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHHHHH
T ss_pred CeEEEEeccc---HHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHcCCCCCcceecCCCCccHHHHHHHHHHH
Confidence 6888886552 112456789999999994 8877665443333333 33345533 222110 01
Q ss_pred ---hhhhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhhH-----HHHHH-HHHH-hhcCCEEEEechhhHHH
Q 005746 306 ---FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR-----EYFDR-AKLV-LDRVKLLVFLSESQTKQ 375 (679)
Q Consensus 306 ---fk~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~rr-----eYfdr-~k~v-l~rvk~LIfvSesq~k~ 375 (679)
+....++|+||+++.....|...+.+.. .+ .+++++.+.... .+... .+.+ ...++.++++|+...+.
T Consensus 78 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~-~~-ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 155 (384)
T 1vgv_A 78 LKPILAEFKPDVVLVHGDTTTTLATSLAAFY-QR-IPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQN 155 (384)
T ss_dssp HHHHHHHHCCSEEEEETTCHHHHHHHHHHHT-TT-CCEEEESCCCCCSCTTSSTTHHHHHHHHHTTCSEEEESSHHHHHH
T ss_pred HHHHHHHhCCCEEEEeCCchHHHHHHHHHHH-HC-CCEEEEecccccccccCCCchHhhHHHHHhhccEEEcCcHHHHHH
Confidence 0123589999997532223333333322 22 345555553210 00011 1222 34589999999988776
Q ss_pred HHHHHHHhhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcC-CCC-CCEEEEEEeccC
Q 005746 376 WLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMG-LTD-QDMLVLSLSSIN 453 (679)
Q Consensus 376 w~~~~~eegi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelG-L~d-~d~LVlsvGrIn 453 (679)
+ .+.|+.. .++.++|+++.+...+... .. ..+...+..+++++| +++ +.++++++|++.
T Consensus 156 l----~~~g~~~-~~i~vi~n~~~d~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~ 216 (384)
T 1vgv_A 156 L----LRENVAD-SRIFITGNTVIDALLWVRD-------------QV-MSSDKLRSELAANYPFIDPDKKMILVTGHRRE 216 (384)
T ss_dssp H----HHTTCCG-GGEEECCCHHHHHHHHHHH-------------HT-TTCHHHHHHHHTTCTTCCTTSEEEEEECCCBS
T ss_pred H----HHcCCCh-hhEEEeCChHHHHHHhhhh-------------cc-ccchhhhHHHHHhccccCCCCCEEEEEeCCcc
Confidence 3 3456542 4678999986544322110 00 000012345788899 854 457888999998
Q ss_pred CC-CCHHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCccccccccccccccccccc
Q 005746 454 PG-KGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPV 532 (679)
Q Consensus 454 p~-KGq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (679)
+. ||++.|++|++.+.++.|+
T Consensus 217 ~~~kg~~~li~a~~~l~~~~~~---------------------------------------------------------- 238 (384)
T 1vgv_A 217 SFGRGFEEICHALADIATTHQD---------------------------------------------------------- 238 (384)
T ss_dssp SCCHHHHHHHHHHHHHHHHCTT----------------------------------------------------------
T ss_pred ccchHHHHHHHHHHHHHhhCCC----------------------------------------------------------
Confidence 76 9999999999998765432
Q ss_pred ccccCCCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECC
Q 005746 533 RKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTP 612 (679)
Q Consensus 533 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG 612 (679)
+++++ ..|.+ +..++.++.+.. ..++|.|+|
T Consensus 239 ----------------------------------------~~l~i--~~g~~----~~~~~~l~~~~~---~~~~v~~~g 269 (384)
T 1vgv_A 239 ----------------------------------------IQIVY--PVHLN----PNVREPVNRILG---HVKNVILID 269 (384)
T ss_dssp ----------------------------------------EEEEE--ECCBC----HHHHHHHHHHHT---TCTTEEEEC
T ss_pred ----------------------------------------eEEEE--EcCCC----HHHHHHHHHHhh---cCCCEEEeC
Confidence 22332 23432 123444555433 236899965
Q ss_pred C--chhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCC-CCCccCC
Q 005746 613 A--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQI-ELSRKDP 664 (679)
Q Consensus 613 ~--~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~-g~~r~~~ 664 (679)
. .++++.+|++||++|+|| |.+++||||||+|||+|+. ++.++-.
T Consensus 270 ~~~~~~~~~~~~~ad~~v~~S-------g~~~lEA~a~G~PvI~~~~~~~~~e~v 317 (384)
T 1vgv_A 270 PQEYLPFVWLMNHAWLILTDS-------GGIQEEAPSLGKPVLVMRDTTERPEAV 317 (384)
T ss_dssp CCCHHHHHHHHHHCSEEEESS-------STGGGTGGGGTCCEEEESSCCSCHHHH
T ss_pred CCCHHHHHHHHHhCcEEEECC-------cchHHHHHHcCCCEEEccCCCCcchhh
Confidence 4 279999999999999999 3358999999999999986 7766533
No 19
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.81 E-value=4.7e-19 Score=182.93 Aligned_cols=57 Identities=11% Similarity=0.130 Sum_probs=53.3
Q ss_pred HHhCCCCCcEEECCCc--hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHH-------HcCCCEEEeCC
Q 005746 599 SQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAM-------AFGVPKNISQI 657 (679)
Q Consensus 599 ~~~lnLs~~V~ftG~~--tdVaslysAADV~VlpSq~~~EgFGrV~IEAM-------A~GlPVV~S~~ 657 (679)
++.+++.++|.|+|+. ++++.+|++|||+|+||. .|+||++++||| |||+|||+|++
T Consensus 258 ~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas~~ 323 (406)
T 2hy7_A 258 GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCPNA 323 (406)
T ss_dssp CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEEGG
T ss_pred HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEehh
Confidence 4567899999999996 689999999999999996 899999999999 99999999998
No 20
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.79 E-value=7.4e-19 Score=159.94 Aligned_cols=125 Identities=21% Similarity=0.274 Sum_probs=100.2
Q ss_pred HHHHHHHcCCCCCCEEEEEEeccC-CCCCHHHHHHHHHHHH--HhCCCCchhhhhhcccccccccccccccccccccccc
Q 005746 430 RDSVRKEMGLTDQDMLVLSLSSIN-PGKGQLLLVESAQLMI--EQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQ 506 (679)
Q Consensus 430 R~svRkelGL~d~d~LVlsvGrIn-p~KGq~lLLeA~~~li--eq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~ 506 (679)
+..+|+++|++++ .+|+++|++. +.||++.+++|++.+. ++.
T Consensus 24 ~~~~r~~~~~~~~-~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~---------------------------------- 68 (200)
T 2bfw_A 24 KKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF---------------------------------- 68 (200)
T ss_dssp HHHHHHHTTCCSC-EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG----------------------------------
T ss_pred HHHHHHHcCCCCC-CEEEEeeccccccCCHHHHHHHHHHHHhhccC----------------------------------
Confidence 4568999999755 4899999999 9999999999999875 322
Q ss_pred cccccCCcccccccccccccccccccccccCCCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCC
Q 005746 507 MSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSN 586 (679)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~sn 586 (679)
+++++++ +|.+.
T Consensus 69 ----------------------------------------------------------------~~~~l~i---~G~~~- 80 (200)
T 2bfw_A 69 ----------------------------------------------------------------QEMRFII---IGKGD- 80 (200)
T ss_dssp ----------------------------------------------------------------GGEEEEE---ECCBC-
T ss_pred ----------------------------------------------------------------CCeEEEE---ECCCC-
Confidence 2334564 45532
Q ss_pred ChHHHHHHHHHHHHhCCCCCcEEE-CCCch--hHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccC
Q 005746 587 KVPYVKEILEFLSQHSNLSKAMLW-TPATT--RVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKD 663 (679)
Q Consensus 587 k~~y~k~~L~~L~~~lnLs~~V~f-tG~~t--dVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~ 663 (679)
..+ .+.++.+.+.++ +|.| +|+.+ ++..+|++||++|+||. .|+||++++||||||+|||+|+.++.++.
T Consensus 81 -~~~-~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~ 153 (200)
T 2bfw_A 81 -PEL-EGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLRDI 153 (200)
T ss_dssp -HHH-HHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEEEESCHHHHHH
T ss_pred -hHH-HHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCC--CCCccHHHHHHHHCCCCEEEeCCCChHHH
Confidence 123 344556666665 9999 99976 99999999999999996 89999999999999999999999987765
Q ss_pred C
Q 005746 664 P 664 (679)
Q Consensus 664 ~ 664 (679)
.
T Consensus 154 ~ 154 (200)
T 2bfw_A 154 I 154 (200)
T ss_dssp C
T ss_pred c
Confidence 5
No 21
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.78 E-value=1.5e-18 Score=170.88 Aligned_cols=280 Identities=13% Similarity=0.109 Sum_probs=160.2
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHC-C-CeEEEEEeCCCCCChhH-HhcCCeEE-EEcC-----CCcch------
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSC-G-ATVSAVVLSKRGGLMPE-LARRKIKV-LEDR-----GEPSF------ 306 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~-G-~~VsaVvLs~~GgL~~E-L~rrgIkV-l~~r-----~~~sf------ 306 (679)
+|||++++.+.+-.| .+..++.+|.+. | ++|.+++.........+ +...++++ +... ....+
T Consensus 8 ~mkIl~v~~~~~~~~---~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T 3beo_A 8 RLKVMTIFGTRPEAI---KMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTRGL 84 (375)
T ss_dssp CEEEEEEECSHHHHH---HHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHHHHH
T ss_pred CceEEEEecCcHHHH---HHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHcCCCCccccccCCCcccHHHHHHHHH
Confidence 379999986543222 456788888776 4 77766553322122222 22234443 2211 11101
Q ss_pred ------hhhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhh--HHH----HHHHHHHh-hcCCEEEEechhhH
Q 005746 307 ------KTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR--REY----FDRAKLVL-DRVKLLVFLSESQT 373 (679)
Q Consensus 307 ------k~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~r--reY----fdr~k~vl-~rvk~LIfvSesq~ 373 (679)
....++|+||+++.....++..+.+.. .+ .+++++.+..+ ..| ....+.++ ..++.++++|+...
T Consensus 85 ~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~-~~-ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 162 (375)
T 3beo_A 85 EGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFY-NQ-IPVGHVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFSPTAKSA 162 (375)
T ss_dssp HHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHH-TT-CCEEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHH
T ss_pred HHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHH-HC-CCEEEEecccccccccCCChhHhhhhHHhhhhheeeCCCHHHH
Confidence 123589999997642222222222221 12 23454444221 000 01112223 34899999999887
Q ss_pred HHHHHHHHHhhccCCCCcEEeeCC-CchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEecc
Q 005746 374 KQWLTWCEEEKLKLRSQPAVVPLS-VNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSI 452 (679)
Q Consensus 374 k~w~~~~~eegi~l~sq~~VVP~g-VndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGrI 452 (679)
+.+ .+.++. +.++.|||++ ++... +... + .. +..+++++ +++.++++++|++
T Consensus 163 ~~~----~~~g~~-~~~i~vi~n~~~d~~~-~~~~-------~-~~-----------~~~~~~~~--~~~~~vl~~~gr~ 215 (375)
T 3beo_A 163 TNL----QKENKD-ESRIFITGNTAIDALK-TTVK-------E-TY-----------SHPVLEKL--GNNRLVLMTAHRR 215 (375)
T ss_dssp HHH----HHTTCC-GGGEEECCCHHHHHHH-HHCC-------S-SC-----------CCHHHHTT--TTSEEEEEECCCG
T ss_pred HHH----HHcCCC-cccEEEECChhHhhhh-hhhh-------h-hh-----------hHHHHHhc--cCCCeEEEEeccc
Confidence 763 334554 2468899999 55332 1110 0 00 01234444 4566778899999
Q ss_pred CCC-CCHHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCcccccccccccccccccc
Q 005746 453 NPG-KGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEP 531 (679)
Q Consensus 453 np~-KGq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (679)
.+. ||++.|++|++.+.++.|+
T Consensus 216 ~~~~K~~~~li~a~~~l~~~~~~--------------------------------------------------------- 238 (375)
T 3beo_A 216 ENLGEPMRNMFRAIKRLVDKHED--------------------------------------------------------- 238 (375)
T ss_dssp GGTTHHHHHHHHHHHHHHHHCTT---------------------------------------------------------
T ss_pred ccchhHHHHHHHHHHHHHhhCCC---------------------------------------------------------
Confidence 875 9999999999988765432
Q ss_pred cccccCCCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEEC
Q 005746 532 VRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWT 611 (679)
Q Consensus 532 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ft 611 (679)
++ +++| .|. + +.+++.++.+. +..++|.|+
T Consensus 239 -----------------------------------------~~-~i~~-~g~--~--~~~~~~~~~~~---~~~~~v~~~ 268 (375)
T 3beo_A 239 -----------------------------------------VQ-VVYP-VHM--N--PVVRETANDIL---GDYGRIHLI 268 (375)
T ss_dssp -----------------------------------------EE-EEEE-CCS--C--HHHHHHHHHHH---TTCTTEEEE
T ss_pred -----------------------------------------eE-EEEe-CCC--C--HHHHHHHHHHh---hccCCEEEe
Confidence 22 3332 232 2 22344444442 233689997
Q ss_pred CCc--hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCC-CCCccCCCCC
Q 005746 612 PAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQI-ELSRKDPTSG 667 (679)
Q Consensus 612 G~~--tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~-g~~r~~~~~~ 667 (679)
|.. .++..+|++||++|+|| |.+++||||||+|||+|+. ++.++-..+|
T Consensus 269 g~~~~~~~~~~~~~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g 320 (375)
T 3beo_A 269 EPLDVIDFHNVAARSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTERPEGIEAG 320 (375)
T ss_dssp CCCCHHHHHHHHHTCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSCHHHHHTT
T ss_pred CCCCHHHHHHHHHhCcEEEECC-------CChHHHHHhcCCCEEEecCCCCCceeecCC
Confidence 762 49999999999999999 6789999999999999964 7766544333
No 22
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.78 E-value=3.4e-18 Score=175.34 Aligned_cols=257 Identities=11% Similarity=0.098 Sum_probs=159.1
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCC-ChhHHhcCCeE--EEEcCCCcc-----hhhhcCcCEEEEc
Q 005746 247 LIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG-LMPELARRKIK--VLEDRGEPS-----FKTSMKADLVIAG 318 (679)
Q Consensus 247 lI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~Gg-L~~EL~rrgIk--Vl~~r~~~s-----fk~~~kaDLVia~ 318 (679)
+.+|..|. |..+++..|+++|.+.| +|.+.+.+..+. +..++. .++. +. .+.+.. +....+||+||..
T Consensus 43 iwih~~s~-G~~~~~~~L~~~L~~~~-~v~v~~~~~~~~~~~~~~~-~~v~~~~~-~p~~~~~~l~~~l~~~~pDiv~~~ 118 (374)
T 2xci_A 43 LWVHTASI-GEFNTFLPILKELKREH-RILLTYFSPRAREYLKTKS-DFYDCLHP-LPLDNPFSVKRFEELSKPKALIVV 118 (374)
T ss_dssp EEEECSSH-HHHHHHHHHHHHHHHHS-CEEEEESCGGGHHHHHTTG-GGCSEEEE-CCCSSHHHHHHHHHHHCCSEEEEE
T ss_pred EEEEcCCH-HHHHHHHHHHHHHHhcC-CEEEEEcCCcHHHHHHHhc-ccccceeE-CCCCCHHHHHHHHHHhCCCEEEEE
Confidence 46788774 66789999999999999 887655443332 122222 3454 33 332221 1234579999864
Q ss_pred chhHHHHHHHHHHhcCCCCccEEEeeehhhHHHHHHHHHHhhcCCEEEEechhhHHHHHHHHHHhhccCCCCcEEeeCCC
Q 005746 319 SAVCATWIDQYITRFPAGGSQVVWWIMENRREYFDRAKLVLDRVKLLVFLSESQTKQWLTWCEEEKLKLRSQPAVVPLSV 398 (679)
Q Consensus 319 Sav~aswI~qyia~~pag~s~VvWwI~E~rreYfdr~k~vl~rvk~LIfvSesq~k~w~~~~~eegi~l~sq~~VVP~gV 398 (679)
.. ..|.. ++..... +++.+........ ..+.++.+++.++++|+...+.+ .+.|+. ++.|+|++.
T Consensus 119 ~~--~~~~~-~~~~~~~---p~~~~~~~~~~~~--~~~~~~~~~d~ii~~S~~~~~~l----~~~g~~---ki~vi~n~~ 183 (374)
T 2xci_A 119 ER--EFWPS-LIIFTKV---PKILVNAYAKGSL--IEKILSKKFDLIIMRTQEDVEKF----KTFGAK---RVFSCGNLK 183 (374)
T ss_dssp SC--CCCHH-HHHHCCS---CEEEEEECCCCCH--HHHHHHTTCSEEEESCHHHHHHH----HTTTCC---SEEECCCGG
T ss_pred Cc--cCcHH-HHHHHhC---CEEEEEeecCchH--HHHHHHHhCCEEEECCHHHHHHH----HHcCCC---eEEEcCCCc
Confidence 21 11221 1221111 3433222111101 22456788999999999988763 334554 688888762
Q ss_pred chhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEeccCCCCCHHHHHHHHHHHHHhCCCCchh
Q 005746 399 NDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDS 478 (679)
Q Consensus 399 ndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGrInp~KGq~lLLeA~~~lieq~p~~~~~ 478 (679)
-+ .+ ..+ . ++ +. .++++..|+ ..||++.|++|++.+.++.|+
T Consensus 184 f~-------------~~-~~~-~-------------~~--l~--~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~---- 225 (374)
T 2xci_A 184 FI-------------CQ-KGK-G-------------IK--LK--GEFIVAGSI--HTGEVEIILKAFKEIKKTYSS---- 225 (374)
T ss_dssp GC-------------CC-CCS-C-------------CC--CS--SCEEEEEEE--CGGGHHHHHHHHHHHHTTCTT----
T ss_pred cC-------------CC-cCh-h-------------hh--hc--CCEEEEEeC--CCchHHHHHHHHHHHHhhCCC----
Confidence 10 00 000 0 00 11 145555554 568999999999998654432
Q ss_pred hhhhcccccccccccccccccccccccccccccCCcccccccccccccccccccccccCCCCcccccCCCCccccCCccc
Q 005746 479 KIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHL 558 (679)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 558 (679)
T Consensus 226 -------------------------------------------------------------------------------- 225 (374)
T 2xci_A 226 -------------------------------------------------------------------------------- 225 (374)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCC--------CcEEECCCchhHHHHHHHcCEEEEc
Q 005746 559 RRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLS--------KAMLWTPATTRVASLYSAADVYVIN 630 (679)
Q Consensus 559 ~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs--------~~V~ftG~~tdVaslysAADV~Vlp 630 (679)
++++++ |.+.. ..+.++.+++++|+. ..|.|.|.+.+++.+|++|||+|++
T Consensus 226 --------------~~lviv---G~g~~----~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ 284 (374)
T 2xci_A 226 --------------LKLILV---PRHIE----NAKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVG 284 (374)
T ss_dssp --------------CEEEEE---ESSGG----GHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEEC
T ss_pred --------------cEEEEE---CCCHH----HHHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEEC
Confidence 345654 44321 123456667778887 5799999999999999999999998
Q ss_pred CCCCCCCccHHHHHHHHcCCCEEEe-CCCCCcc
Q 005746 631 SQGLGETFGRVTIEAMAFGVPKNIS-QIELSRK 662 (679)
Q Consensus 631 Sq~~~EgFGrV~IEAMA~GlPVV~S-~~g~~r~ 662 (679)
|. +.|+||++++||||||+|||++ ++++.++
T Consensus 285 ss-~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e 316 (374)
T 2xci_A 285 GT-FVNIGGHNLLEPTCWGIPVIYGPYTHKVND 316 (374)
T ss_dssp SS-SSSSCCCCCHHHHTTTCCEEECSCCTTSHH
T ss_pred Cc-ccCCCCcCHHHHHHhCCCEEECCCccChHH
Confidence 75 4688999999999999999975 6777665
No 23
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.76 E-value=5.1e-17 Score=174.77 Aligned_cols=240 Identities=14% Similarity=0.133 Sum_probs=148.1
Q ss_pred CcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhh--HHHHHH---HHHHh---hcCCEEEEechhhHHHHHHHHHH
Q 005746 311 KADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR--REYFDR---AKLVL---DRVKLLVFLSESQTKQWLTWCEE 382 (679)
Q Consensus 311 kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~r--reYfdr---~k~vl---~rvk~LIfvSesq~k~w~~~~~e 382 (679)
..|+|++|..-.. .+..++... ....+++|.+|-.- .++|.. .+.++ -..+.+.|.+....+.+...|..
T Consensus 123 ~~DiV~vHdyhl~-~l~~~lr~~-~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~ 200 (482)
T 1uqt_A 123 DDDIIWIHDYHLL-PFAHELRKR-GVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSN 200 (482)
T ss_dssp TTCEEEEESGGGT-THHHHHHHT-TCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHH-HHHHHHHHh-CCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHH
Confidence 4699999863211 122233322 12345777776421 122211 11222 24578888877666665554542
Q ss_pred h-h--------ccC---CCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEe
Q 005746 383 E-K--------LKL---RSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLS 450 (679)
Q Consensus 383 e-g--------i~l---~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvG 450 (679)
. + +.. ..++.|||+|||.+.+..... .| +. .. +..+|+++| ++.+|+++|
T Consensus 201 ~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~-----~~----~~-----~~-~~~lr~~~~---~~~vil~Vg 262 (482)
T 1uqt_A 201 LTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAA-----GP----LP-----PK-LAQLKAELK---NVQNIFSVE 262 (482)
T ss_dssp HSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHH-----SC----CC-----HH-HHHHHHHTT---TCEEEEEEC
T ss_pred HhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhc-----Cc----ch-----HH-HHHHHHHhC---CCEEEEEEe
Confidence 1 1 110 124689999998765422100 00 00 11 356788887 678999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCccccccccccccccccc
Q 005746 451 SINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNE 530 (679)
Q Consensus 451 rInp~KGq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (679)
|+.+.||++.+|+|++.++++.|+.
T Consensus 263 Rl~~~Kgi~~ll~A~~~ll~~~p~~------------------------------------------------------- 287 (482)
T 1uqt_A 263 RLDYSKGLPERFLAYEALLEKYPQH------------------------------------------------------- 287 (482)
T ss_dssp CBCGGGCHHHHHHHHHHHHHHCGGG-------------------------------------------------------
T ss_pred CCcccCCHHHHHHHHHHHHHhCccc-------------------------------------------------------
Confidence 9999999999999999998876541
Q ss_pred ccccccCCCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHH--HHHHHHHHHHhCC----C
Q 005746 531 PVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPY--VKEILEFLSQHSN----L 604 (679)
Q Consensus 531 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y--~k~~L~~L~~~ln----L 604 (679)
..++.+++||. ++..+...| +++.++.++.+.| .
T Consensus 288 ---------------------------------------~~~v~Lv~vG~-p~~~~~~~~~~l~~~l~~l~~~in~~~g~ 327 (482)
T 1uqt_A 288 ---------------------------------------HGKIRYTQIAP-TSRGDVQAYQDIRHQLENEAGRINGKYGQ 327 (482)
T ss_dssp ---------------------------------------TTTEEEEEECC-BCSTTSHHHHHHHHHHHHHHHHHHHHHCB
T ss_pred ---------------------------------------cCcEEEEEEEC-CCccchHHHHHHHHHHHHHHHHHhhhccc
Confidence 01244565543 111111222 4555666655433 2
Q ss_pred C--CcEE-ECCC--chhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCC-----CEEEeCCCCCccCCCCC
Q 005746 605 S--KAML-WTPA--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGV-----PKNISQIELSRKDPTSG 667 (679)
Q Consensus 605 s--~~V~-ftG~--~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~Gl-----PVV~S~~g~~r~~~~~~ 667 (679)
. ..|+ |+|. .++++.+|++|||||+||. .||||+|++||||||+ |||+|+.+|..+...+|
T Consensus 328 ~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~~g 398 (482)
T 1uqt_A 328 LGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSA 398 (482)
T ss_dssp TTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCTTS
T ss_pred CCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhCCe
Confidence 2 1355 5675 6899999999999999995 9999999999999998 99999988877666433
No 24
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.72 E-value=6e-17 Score=160.92 Aligned_cols=269 Identities=15% Similarity=0.077 Sum_probs=155.6
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHC-CCeEEEEEeCCCCCC-hhHHhcCCeEE-EEcCC--C-cc-----------
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSC-GATVSAVVLSKRGGL-MPELARRKIKV-LEDRG--E-PS----------- 305 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~-G~~VsaVvLs~~GgL-~~EL~rrgIkV-l~~r~--~-~s----------- 305 (679)
+||++++.+.+-.| .+..|+.+|.+. ||+|.+++....... ...+...++.. ++... . ..
T Consensus 6 mkIl~v~~~~~~~~---~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (376)
T 1v4v_A 6 KRVVLAFGTRPEAT---KMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQ 82 (376)
T ss_dssp EEEEEEECSHHHHH---HHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHH
T ss_pred eEEEEEEeccHHHH---HHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHHcCCCcccccccCCCCccHHHHHHHHHHH
Confidence 68999986643222 356789999988 799876653321111 12344456543 22211 0 00
Q ss_pred ---hhhhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhh---------HHHHHHHHHHhhcCCEEEEechhhH
Q 005746 306 ---FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENR---------REYFDRAKLVLDRVKLLVFLSESQT 373 (679)
Q Consensus 306 ---fk~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~r---------reYfdr~k~vl~rvk~LIfvSesq~ 373 (679)
+....+||+||++......|...+.+.. .+. ++++..+... .... .+.+...++.+++.|+...
T Consensus 83 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~-~~i-p~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~~ 158 (376)
T 1v4v_A 83 AARALKEMGADYVLVHGDTLTTFAVAWAAFL-EGI-PVGHVEAGLRSGNLKEPFPEEAN--RRLTDVLTDLDFAPTPLAK 158 (376)
T ss_dssp HHHHHHHTTCSEEEEESSCHHHHHHHHHHHH-TTC-CEEEETCCCCCSCTTSSTTHHHH--HHHHHHHCSEEEESSHHHH
T ss_pred HHHHHHHcCCCEEEEeCChHHHHHHHHHHHH-hCC-CEEEEeCCCccccccCCCchHHH--HHHHHHHhceeeCCCHHHH
Confidence 0123589999996432223332222221 122 2433221111 0011 1223345788888888876
Q ss_pred HHHHHHHHHhhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcCCCCCCEEEEEEeccC
Q 005746 374 KQWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMGLTDQDMLVLSLSSIN 453 (679)
Q Consensus 374 k~w~~~~~eegi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelGL~d~d~LVlsvGrIn 453 (679)
+. ..+.|+. +.++.+|++++.+...+.. .+..+|+++ +++.++++++|++.
T Consensus 159 ~~----l~~~g~~-~~ki~vi~n~~~d~~~~~~----------------------~~~~~~~~~--~~~~~vl~~~gr~~ 209 (376)
T 1v4v_A 159 AN----LLKEGKR-EEGILVTGQTGVDAVLLAA----------------------KLGRLPEGL--PEGPYVTVTMHRRE 209 (376)
T ss_dssp HH----HHTTTCC-GGGEEECCCHHHHHHHHHH----------------------HHCCCCTTC--CSSCEEEECCCCGG
T ss_pred HH----HHHcCCC-cceEEEECCchHHHHhhhh----------------------hhhHHHHhc--CCCCEEEEEeCccc
Confidence 65 3344654 2457788887544321110 011123334 35667888899998
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCcccccccccccccccccccc
Q 005746 454 PGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEPVR 533 (679)
Q Consensus 454 p~KGq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (679)
..||++.|++|++.+.++.|+
T Consensus 210 ~~k~~~~ll~a~~~l~~~~~~----------------------------------------------------------- 230 (376)
T 1v4v_A 210 NWPLLSDLAQALKRVAEAFPH----------------------------------------------------------- 230 (376)
T ss_dssp GGGGHHHHHHHHHHHHHHCTT-----------------------------------------------------------
T ss_pred chHHHHHHHHHHHHHHhhCCC-----------------------------------------------------------
Confidence 889999999999998765433
Q ss_pred cccCCCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECC-
Q 005746 534 KNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTP- 612 (679)
Q Consensus 534 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG- 612 (679)
.++++ .+|.+ + ..++.++.+... .++|.|+|
T Consensus 231 ---------------------------------------~~lv~--~~g~~--~--~~~~~l~~~~~~---~~~v~~~g~ 262 (376)
T 1v4v_A 231 ---------------------------------------LTFVY--PVHLN--P--VVREAVFPVLKG---VRNFVLLDP 262 (376)
T ss_dssp ---------------------------------------SEEEE--ECCSC--H--HHHHHHHHHHTT---CTTEEEECC
T ss_pred ---------------------------------------eEEEE--ECCCC--H--HHHHHHHHHhcc---CCCEEEECC
Confidence 12232 24643 1 234556555432 46899994
Q ss_pred --CchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEe-CCCCCcc
Q 005746 613 --ATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNIS-QIELSRK 662 (679)
Q Consensus 613 --~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S-~~g~~r~ 662 (679)
+. +++.+|++||++|++| | |. ++||||||+|||++ ++++..+
T Consensus 263 ~g~~-~~~~~~~~ad~~v~~S----~--g~-~lEA~a~G~PvI~~~~~~~~~~ 307 (376)
T 1v4v_A 263 LEYG-SMAALMRASLLLVTDS----G--GL-QEEGAALGVPVVVLRNVTERPE 307 (376)
T ss_dssp CCHH-HHHHHHHTEEEEEESC----H--HH-HHHHHHTTCCEEECSSSCSCHH
T ss_pred CCHH-HHHHHHHhCcEEEECC----c--CH-HHHHHHcCCCEEeccCCCcchh
Confidence 45 9999999999999999 2 43 88999999999998 4566544
No 25
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.71 E-value=3.4e-17 Score=145.28 Aligned_cols=71 Identities=15% Similarity=0.258 Sum_probs=59.6
Q ss_pred HHHHHHHHhCCCCCcEEECCC--chhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCC-CEEE-eCCCCCccCCCCCC
Q 005746 593 EILEFLSQHSNLSKAMLWTPA--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGV-PKNI-SQIELSRKDPTSGT 668 (679)
Q Consensus 593 ~~L~~L~~~lnLs~~V~ftG~--~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~Gl-PVV~-S~~g~~r~~~~~~~ 668 (679)
+.++.+++++++ .|.| |+ .+++..+|++||++|+||. .|+||++++||||||+ |||+ ++.++.++...++.
T Consensus 45 ~~~~~~~~~~~~--~v~~-g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~ 119 (166)
T 3qhp_A 45 KKIKLLAQKLGV--KAEF-GFVNSNELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATRQFALDER 119 (166)
T ss_dssp HHHHHHHHHHTC--EEEC-CCCCHHHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGG
T ss_pred HHHHHHHHHcCC--eEEE-eecCHHHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCc
Confidence 445566666777 8898 98 5789999999999999996 8999999999999998 9999 56787777666543
No 26
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.68 E-value=3.6e-17 Score=149.22 Aligned_cols=65 Identities=20% Similarity=0.217 Sum_probs=58.3
Q ss_pred hCCCCCcEEECCCchh--HHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccCCCCC
Q 005746 601 HSNLSKAMLWTPATTR--VASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKDPTSG 667 (679)
Q Consensus 601 ~lnLs~~V~ftG~~td--VaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~~~~~ 667 (679)
.++++++|.|+|+.++ +..+|++||++|+||. .|+||++++||||||+|||+|+.++.++...++
T Consensus 73 ~~~l~~~v~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~ 139 (177)
T 2f9f_A 73 MKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINE 139 (177)
T ss_dssp HHHSCTTEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBT
T ss_pred hcccCCcEEEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCC
Confidence 5689999999999765 9999999999999996 999999999999999999999999877755443
No 27
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.66 E-value=1.1e-15 Score=172.33 Aligned_cols=62 Identities=18% Similarity=0.253 Sum_probs=53.0
Q ss_pred HhCCCCCc------EEECCC---c------hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCccC
Q 005746 600 QHSNLSKA------MLWTPA---T------TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRKD 663 (679)
Q Consensus 600 ~~lnLs~~------V~ftG~---~------tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~ 663 (679)
++++|.+. |.|.|. . .++..+|++||+||+||. .|+||++++||||||+|||+|+++|.++-
T Consensus 480 r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~gG~~d~ 556 (725)
T 3nb0_A 480 RQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSY--YEPWGYTPAECTVMGVPSITTNVSGFGSY 556 (725)
T ss_dssp HHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCS--SBSSCHHHHHHHHTTCCEEEETTBHHHHH
T ss_pred HhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccc--cCCCCHHHHHHHHcCCCEEEeCCCChhhh
Confidence 34677777 677755 1 269999999999999995 99999999999999999999999997653
No 28
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.62 E-value=1.5e-15 Score=165.43 Aligned_cols=185 Identities=11% Similarity=0.075 Sum_probs=129.7
Q ss_pred hhcCCEEEEechhhHHHHHHHHHHh--hccCC------------CCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHH
Q 005746 359 LDRVKLLVFLSESQTKQWLTWCEEE--KLKLR------------SQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMRE 424 (679)
Q Consensus 359 l~rvk~LIfvSesq~k~w~~~~~ee--gi~l~------------sq~~VVP~gVndElafvagi~~slntp~fspek~~e 424 (679)
+-.+|.+.|-+..-.+.+...|... +.... .++.++|+|||.+.+. +... +
T Consensus 205 ll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~--------------~~~~-~ 269 (496)
T 3t5t_A 205 MLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLD--------------GRNP-Q 269 (496)
T ss_dssp HTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC------------------C-C
T ss_pred HHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhc--------------hhhH-H
Confidence 3467999999888888888777643 32210 1357888888876432 1100 0
Q ss_pred hhHHHHHHHHHHcCCCCCCEEEEEEeccCCCCCHHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccc
Q 005746 425 KRNLLRDSVRKEMGLTDQDMLVLSLSSINPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGL 504 (679)
Q Consensus 425 kr~~lR~svRkelGL~d~d~LVlsvGrInp~KGq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l 504 (679)
.++.+|+++| +..+|+++||+.+.||++.+|+|+ .++++.|+.
T Consensus 270 ----~~~~lr~~~~---~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~----------------------------- 312 (496)
T 3t5t_A 270 ----LPEGIEEWAD---GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGL----------------------------- 312 (496)
T ss_dssp ----CCTTHHHHHT---TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSC-----------------------------
T ss_pred ----HHHHHHHHhC---CceEEEEcccCccccCHHHHHHHH-HHHHhCccc-----------------------------
Confidence 0134677787 578999999999999999999999 888877651
Q ss_pred cccccccCCcccccccccccccccccccccccCCCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCC
Q 005746 505 LQMSDDVGLSSNELSVSSESFTQLNEPVRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSK 584 (679)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~ 584 (679)
. ++.+++||.-..+
T Consensus 313 -----------------------------------------------------------------~-~v~Lv~Vg~psr~ 326 (496)
T 3t5t_A 313 -----------------------------------------------------------------E-KTRMLVRMNPNRL 326 (496)
T ss_dssp -----------------------------------------------------------------T-TEEEEEEEECCCT
T ss_pred -----------------------------------------------------------------c-eEEEEEEECCCCC
Confidence 0 2335655532111
Q ss_pred CCChH--HHHHHHHHHHHhCCCC---CcEEECCC--chhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcC---CCEEE
Q 005746 585 SNKVP--YVKEILEFLSQHSNLS---KAMLWTPA--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFG---VPKNI 654 (679)
Q Consensus 585 snk~~--y~k~~L~~L~~~lnLs---~~V~ftG~--~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~G---lPVV~ 654 (679)
+... .+++.++.++.+.|.. ..|+|+|. .++++.+|++|||+|+||. .||||+|.+|||||| .|+|.
T Consensus 327 -~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~Sl--rEGfgLv~~EamA~~~~~g~lVl 403 (496)
T 3t5t_A 327 -YVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNST--VDGQNLSTFEAPLVNERDADVIL 403 (496)
T ss_dssp -TSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCS--SBSCCSHHHHHHHHCSSCCEEEE
T ss_pred -CchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcc--cccCChhHHHHHHhCCCCCCEEE
Confidence 1112 2455566666554321 17999997 5789999999999999995 999999999999997 89999
Q ss_pred eCCCCCccCC
Q 005746 655 SQIELSRKDP 664 (679)
Q Consensus 655 S~~g~~r~~~ 664 (679)
|+.+|..+..
T Consensus 404 Se~aGa~~~l 413 (496)
T 3t5t_A 404 SETCGAAEVL 413 (496)
T ss_dssp ETTBTTHHHH
T ss_pred eCCCCCHHHh
Confidence 9998876544
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.43 E-value=1.3e-11 Score=128.05 Aligned_cols=288 Identities=16% Similarity=0.157 Sum_probs=158.6
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHC-CCeEEEEEeCCCCC-ChhHHhcCCeEE-EEcC---CCcc----------
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSC-GATVSAVVLSKRGG-LMPELARRKIKV-LEDR---GEPS---------- 305 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~-G~~VsaVvLs~~Gg-L~~EL~rrgIkV-l~~r---~~~s---------- 305 (679)
.+||++|+-+-+ | -..+..|..+|.+. |+++.+++....-. +.+.+...+|+. ++.. ...+
T Consensus 25 m~ki~~v~Gtr~--~-~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~ 101 (396)
T 3dzc_A 25 MKKVLIVFGTRP--E-AIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILL 101 (396)
T ss_dssp CEEEEEEECSHH--H-HHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHH
T ss_pred CCeEEEEEeccH--h-HHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeeecCCCCCCHHHHHHHHHH
Confidence 368888854432 1 24567788899886 78877655221100 112244566631 1111 1111
Q ss_pred ----hhhhcCcCEEEEcchhHHHHHHHHHHhcCCCCccEEEeeehhhH-----HHHHH-HHHH-hhcCCEEEEechhhHH
Q 005746 306 ----FKTSMKADLVIAGSAVCATWIDQYITRFPAGGSQVVWWIMENRR-----EYFDR-AKLV-LDRVKLLVFLSESQTK 374 (679)
Q Consensus 306 ----fk~~~kaDLVia~Sav~aswI~qyia~~pag~s~VvWwI~E~rr-----eYfdr-~k~v-l~rvk~LIfvSesq~k 374 (679)
+-...+||+||.+......|.....+. ..+. +++......+. .+.+. .+.+ ...++.+++.++...+
T Consensus 102 ~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~-~~~I-Pv~h~~ag~rs~~~~~~~~~~~~r~~~~~~a~~~~~~se~~~~ 179 (396)
T 3dzc_A 102 GMQQVLSSEQPDVVLVHGDTATTFAASLAAY-YQQI-PVGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHFAPTDTSRA 179 (396)
T ss_dssp HHHHHHHHHCCSEEEEETTSHHHHHHHHHHH-TTTC-CEEEETCCCCCSCTTSSTTHHHHHHHHHHTCSEEEESSHHHHH
T ss_pred HHHHHHHhcCCCEEEEECCchhHHHHHHHHH-HhCC-CEEEEECCccccccccCCcHHHHHHHHHHhcCEEECCCHHHHH
Confidence 112468999998653222232222221 1222 24322110000 00011 1222 2345777777877666
Q ss_pred HHHHHHHHhhccCCCCcEEeeCCCchhhhhhhccccCCCCCCCChhhHHHhhHHHHHHHHHHcC-CCCC-CEEEEEEec-
Q 005746 375 QWLTWCEEEKLKLRSQPAVVPLSVNDELAFVAGFTCSLNTPTSSPEKMREKRNLLRDSVRKEMG-LTDQ-DMLVLSLSS- 451 (679)
Q Consensus 375 ~w~~~~~eegi~l~sq~~VVP~gVndElafvagi~~slntp~fspek~~ekr~~lR~svRkelG-L~d~-d~LVlsvGr- 451 (679)
. ...+|++. .++.++++.+-|...+.. +.. +....++..+|+++| ++++ .+++++.+|
T Consensus 180 ~----l~~~G~~~-~ki~vvGn~~~d~~~~~~-------------~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~ 240 (396)
T 3dzc_A 180 N----LLQENYNA-ENIFVTGNTVIDALLAVR-------------EKI-HTDMDLQATLESQFPMLDASKKLILVTGHRR 240 (396)
T ss_dssp H----HHHTTCCG-GGEEECCCHHHHHHHHHH-------------HHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECSCB
T ss_pred H----HHHcCCCc-CcEEEECCcHHHHHHHhh-------------hhc-ccchhhHHHHHHHhCccCCCCCEEEEEECCc
Confidence 5 34567752 467788876544332211 000 001122467899999 4544 455555555
Q ss_pred cCCCCCHHHHHHHHHHHHHhCCCCchhhhhhcccccccccccccccccccccccccccccCCcccccccccccccccccc
Q 005746 452 INPGKGQLLLVESAQLMIEQEPSMDDSKIRKSRNVGRKKSSLTSRHHLRGRGLLQMSDDVGLSSNELSVSSESFTQLNEP 531 (679)
Q Consensus 452 Inp~KGq~lLLeA~~~lieq~p~~~~~~~~~~~~~~~~~~~~~~~h~lr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (679)
-+.+|++..+++|++.+.++.|+
T Consensus 241 ~~~~~~~~~ll~A~~~l~~~~~~--------------------------------------------------------- 263 (396)
T 3dzc_A 241 ESFGGGFERICQALITTAEQHPE--------------------------------------------------------- 263 (396)
T ss_dssp CCCTTHHHHHHHHHHHHHHHCTT---------------------------------------------------------
T ss_pred ccchhHHHHHHHHHHHHHHhCCC---------------------------------------------------------
Confidence 35678999999999998765443
Q ss_pred cccccCCCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEEC
Q 005746 532 VRKNLLSPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWT 611 (679)
Q Consensus 532 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ft 611 (679)
..+++ .+|.+ +.+++.++.+ .+..++|.++
T Consensus 264 -----------------------------------------~~~v~--~~g~~----~~~~~~l~~~---~~~~~~v~~~ 293 (396)
T 3dzc_A 264 -----------------------------------------CQILY--PVHLN----PNVREPVNKL---LKGVSNIVLI 293 (396)
T ss_dssp -----------------------------------------EEEEE--ECCBC----HHHHHHHHHH---TTTCTTEEEE
T ss_pred -----------------------------------------ceEEE--EeCCC----hHHHHHHHHH---HcCCCCEEEe
Confidence 22232 24542 2345555543 3455789998
Q ss_pred CCc--hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEe-CCCCCccCCCCC
Q 005746 612 PAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNIS-QIELSRKDPTSG 667 (679)
Q Consensus 612 G~~--tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S-~~g~~r~~~~~~ 667 (679)
+.. .++..+|++||++|.+| + | +++||||+|+|||++ ++++..+-...|
T Consensus 294 ~~lg~~~~~~l~~~ad~vv~~S---G---g-~~~EA~a~G~PvV~~~~~~~~~e~v~~G 345 (396)
T 3dzc_A 294 EPQQYLPFVYLMDRAHIILTDS---G---G-IQEEAPSLGKPVLVMRETTERPEAVAAG 345 (396)
T ss_dssp CCCCHHHHHHHHHHCSEEEESC---S---G-GGTTGGGGTCCEEECCSSCSCHHHHHHT
T ss_pred CCCCHHHHHHHHHhcCEEEECC---c---c-HHHHHHHcCCCEEEccCCCcchHHHHcC
Confidence 875 68999999999999999 3 4 449999999999998 666654433444
No 30
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.34 E-value=3.9e-11 Score=120.38 Aligned_cols=49 Identities=18% Similarity=0.154 Sum_probs=43.9
Q ss_pred CCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 603 nLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
+++++|.|+|+. ++..+|++||++|.+| .+.+++||||+|+|||+...+
T Consensus 289 ~~~~~v~~~~~~-~~~~~l~~ad~~v~~~------g~~t~~Ea~a~G~P~v~~p~~ 337 (412)
T 3otg_A 289 EVPANVRLESWV-PQAALLPHVDLVVHHG------GSGTTLGALGAGVPQLSFPWA 337 (412)
T ss_dssp CCCTTEEEESCC-CHHHHGGGCSEEEESC------CHHHHHHHHHHTCCEEECCCS
T ss_pred cCCCcEEEeCCC-CHHHHHhcCcEEEECC------chHHHHHHHHhCCCEEecCCc
Confidence 467899999999 8999999999999888 247999999999999998765
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.15 E-value=1e-09 Score=114.54 Aligned_cols=62 Identities=16% Similarity=0.131 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhCCCCCcEEECCCc--hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEe-CCCCCcc
Q 005746 591 VKEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNIS-QIELSRK 662 (679)
Q Consensus 591 ~k~~L~~L~~~lnLs~~V~ftG~~--tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S-~~g~~r~ 662 (679)
+++.++.+ ++..++|+++|.. .++..+|++||++|.+| |-+++||||+|+|||++ +++...+
T Consensus 270 ~~~~l~~~---~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-------Gg~~~EA~a~g~PvV~~~~~~~~~e 334 (403)
T 3ot5_A 270 VREKAMAI---LGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-------GGVQEEAPGMGVPVLVLRDTTERPE 334 (403)
T ss_dssp HHHHHHHH---HTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-------HHHHHHGGGTTCCEEECCSSCSCHH
T ss_pred HHHHHHHH---hCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-------ccHHHHHHHhCCCEEEecCCCcchh
Confidence 45555543 2344789999986 49999999999999998 34569999999999999 5555433
No 32
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.14 E-value=1.2e-09 Score=111.81 Aligned_cols=50 Identities=20% Similarity=0.270 Sum_probs=40.5
Q ss_pred CCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCC
Q 005746 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIEL 659 (679)
Q Consensus 604 Ls~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~ 659 (679)
++..+.+.|+.+|++.+|++||++|.-+ + +.++.||||+|+|+|......
T Consensus 233 ~~~~~~v~~f~~dm~~~l~~aDlvI~ra---G---~~Tv~E~~a~G~P~Ilip~p~ 282 (365)
T 3s2u_A 233 VAVEADVAPFISDMAAAYAWADLVICRA---G---ALTVSELTAAGLPAFLVPLPH 282 (365)
T ss_dssp TTCCCEEESCCSCHHHHHHHCSEEEECC---C---HHHHHHHHHHTCCEEECC---
T ss_pred cccccccccchhhhhhhhccceEEEecC---C---cchHHHHHHhCCCeEEeccCC
Confidence 3446777899999999999999999766 2 688899999999999877654
No 33
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.03 E-value=1.1e-08 Score=103.98 Aligned_cols=50 Identities=14% Similarity=0.181 Sum_probs=43.7
Q ss_pred CCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCC
Q 005746 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIEL 659 (679)
Q Consensus 603 nLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~ 659 (679)
.++++|.++|+.++. .+|++||++|..|- +.+++||||+|+|+|++..++
T Consensus 280 ~~~~~v~~~~~~~~~-~~l~~ad~~v~~~G------~~t~~Ea~~~G~P~i~~p~~~ 329 (430)
T 2iyf_A 280 ELPDNVEVHDWVPQL-AILRQADLFVTHAG------AGGSQEGLATATPMIAVPQAV 329 (430)
T ss_dssp SCCTTEEEESSCCHH-HHHTTCSEEEECCC------HHHHHHHHHTTCCEEECCCSH
T ss_pred cCCCCeEEEecCCHH-HHhhccCEEEECCC------ccHHHHHHHhCCCEEECCCcc
Confidence 367899999999888 89999999999872 379999999999999998753
No 34
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.00 E-value=3.2e-09 Score=107.13 Aligned_cols=49 Identities=20% Similarity=0.240 Sum_probs=42.3
Q ss_pred CCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 603 nLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
+++++|+++|+. ++..+|+.||++|..+ -+.+++|||++|+|+|+....
T Consensus 281 ~~~~~v~~~~~~-~~~~ll~~ad~~v~~g------G~~t~~Ea~~~G~P~v~~p~~ 329 (398)
T 4fzr_A 281 PLPEGVLAAGQF-PLSAIMPACDVVVHHG------GHGTTLTCLSEGVPQVSVPVI 329 (398)
T ss_dssp -CCTTEEEESCC-CHHHHGGGCSEEEECC------CHHHHHHHHHTTCCEEECCCS
T ss_pred cCCCcEEEeCcC-CHHHHHhhCCEEEecC------CHHHHHHHHHhCCCEEecCCc
Confidence 467899999997 6899999999999777 367999999999999997553
No 35
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=98.95 E-value=1.9e-08 Score=101.66 Aligned_cols=48 Identities=17% Similarity=0.207 Sum_probs=42.3
Q ss_pred CCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCC
Q 005746 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQI 657 (679)
Q Consensus 603 nLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~ 657 (679)
+++++|.++|+. ++..+|+.||++|..+ -+.+++|||++|+|+|+...
T Consensus 280 ~~~~~v~~~~~~-~~~~ll~~ad~~v~~~------G~~t~~Eal~~G~P~v~~p~ 327 (398)
T 3oti_A 280 TLPRNVRAVGWT-PLHTLLRTCTAVVHHG------GGGTVMTAIDAGIPQLLAPD 327 (398)
T ss_dssp SCCTTEEEESSC-CHHHHHTTCSEEEECC------CHHHHHHHHHHTCCEEECCC
T ss_pred cCCCcEEEEccC-CHHHHHhhCCEEEECC------CHHHHHHHHHhCCCEEEcCC
Confidence 578899999999 8999999999999876 35689999999999999644
No 36
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=98.93 E-value=7.8e-09 Score=103.52 Aligned_cols=48 Identities=8% Similarity=0.174 Sum_probs=40.5
Q ss_pred CCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCC
Q 005746 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQI 657 (679)
Q Consensus 603 nLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~ 657 (679)
+++++|++.|+.+ ...++++||++|..+ -+.+++|||++|+|+|+...
T Consensus 267 ~~~~~v~~~~~~~-~~~ll~~ad~~v~~~------G~~t~~Ea~~~G~P~v~~p~ 314 (391)
T 3tsa_A 267 DLPDNARIAESVP-LNLFLRTCELVICAG------GSGTAFTATRLGIPQLVLPQ 314 (391)
T ss_dssp TCCTTEEECCSCC-GGGTGGGCSEEEECC------CHHHHHHHHHTTCCEEECCC
T ss_pred cCCCCEEEeccCC-HHHHHhhCCEEEeCC------CHHHHHHHHHhCCCEEecCC
Confidence 5678999999974 567889999999877 35789999999999999754
No 37
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=98.82 E-value=2.9e-07 Score=91.60 Aligned_cols=47 Identities=19% Similarity=0.136 Sum_probs=41.3
Q ss_pred CCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCC
Q 005746 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQI 657 (679)
Q Consensus 604 Ls~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~ 657 (679)
++++|.++|+.++. .+|++||++|..|- ..+++|||++|+|+|+...
T Consensus 279 ~~~~v~~~~~~~~~-~ll~~ad~~v~~~G------~~t~~Ea~~~G~P~v~~p~ 325 (402)
T 3ia7_A 279 LPPNVEAHQWIPFH-SVLAHARACLTHGT------TGAVLEAFAAGVPLVLVPH 325 (402)
T ss_dssp CCTTEEEESCCCHH-HHHTTEEEEEECCC------HHHHHHHHHTTCCEEECGG
T ss_pred CCCcEEEecCCCHH-HHHhhCCEEEECCC------HHHHHHHHHhCCCEEEeCC
Confidence 67899999999888 99999999999882 3678999999999998644
No 38
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=98.67 E-value=1.3e-06 Score=87.61 Aligned_cols=47 Identities=17% Similarity=0.127 Sum_probs=40.4
Q ss_pred CCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 604 LSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 604 Ls~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
++++|.+ |+. +...+|++||+||..+ -+.+++|||++|+|+|+....
T Consensus 262 ~~~~v~~-~~~-~~~~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~v~~p~~ 308 (384)
T 2p6p_A 262 EVPQARV-GWT-PLDVVAPTCDLLVHHA------GGVSTLTGLSAGVPQLLIPKG 308 (384)
T ss_dssp HCTTSEE-ECC-CHHHHGGGCSEEEECS------CTTHHHHHHHTTCCEEECCCS
T ss_pred CCCceEE-cCC-CHHHHHhhCCEEEeCC------cHHHHHHHHHhCCCEEEccCc
Confidence 4678999 987 4689999999999987 246899999999999999764
No 39
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=98.65 E-value=6e-06 Score=83.35 Aligned_cols=48 Identities=19% Similarity=0.180 Sum_probs=41.5
Q ss_pred CCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCC
Q 005746 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQI 657 (679)
Q Consensus 603 nLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~ 657 (679)
.++++|.++|+.++. .+|+.||++|..+- ..+++|||++|+|+|+-..
T Consensus 294 ~~~~~v~~~~~~~~~-~ll~~ad~~v~~~G------~~t~~Ea~~~G~P~v~~p~ 341 (415)
T 3rsc_A 294 DLPPNVEAHRWVPHV-KVLEQATVCVTHGG------MGTLMEALYWGRPLVVVPQ 341 (415)
T ss_dssp CCCTTEEEESCCCHH-HHHHHEEEEEESCC------HHHHHHHHHTTCCEEECCC
T ss_pred CCCCcEEEEecCCHH-HHHhhCCEEEECCc------HHHHHHHHHhCCCEEEeCC
Confidence 467899999999887 99999999999882 3578999999999999644
No 40
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=98.63 E-value=1.6e-06 Score=89.63 Aligned_cols=59 Identities=7% Similarity=-0.102 Sum_probs=46.7
Q ss_pred CCCcEEECCC--chhHHHHHHHcCEEEEcCCC-----CCCCccHHHHHHHHcCCCEEEeCCCCCccC
Q 005746 604 LSKAMLWTPA--TTRVASLYSAADVYVINSQG-----LGETFGRVTIEAMAFGVPKNISQIELSRKD 663 (679)
Q Consensus 604 Ls~~V~ftG~--~tdVaslysAADV~VlpSq~-----~~EgFGrV~IEAMA~GlPVV~S~~g~~r~~ 663 (679)
++ +|.|+|. .++++.+|+.+|+-++...+ +...+|..++|+||||+|||+++.+...+-
T Consensus 213 l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~ 278 (339)
T 3rhz_A 213 PQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQEL 278 (339)
T ss_dssp CT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHH
T ss_pred cC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHH
Confidence 55 8999999 47999999988888776311 012468899999999999999998877653
No 41
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.62 E-value=3.7e-07 Score=95.38 Aligned_cols=47 Identities=23% Similarity=0.215 Sum_probs=39.2
Q ss_pred CCcEEECCCc--hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 605 SKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 605 s~~V~ftG~~--tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
.++|++++.. .++..+|++||++|.+| |.+++|||++|+|||.....
T Consensus 262 ~~~v~l~~~lg~~~~~~l~~~adlvvt~S-------Ggv~~EA~alG~Pvv~~~~~ 310 (385)
T 4hwg_A 262 GDKIRFLPAFSFTDYVKLQMNAFCILSDS-------GTITEEASILNLPALNIREA 310 (385)
T ss_dssp GGGEEECCCCCHHHHHHHHHHCSEEEECC-------TTHHHHHHHTTCCEEECSSS
T ss_pred CCCEEEEcCCCHHHHHHHHHhCcEEEECC-------ccHHHHHHHcCCCEEEcCCC
Confidence 3689998763 58999999999999888 34789999999999997553
No 42
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.41 E-value=6.8e-07 Score=100.48 Aligned_cols=61 Identities=13% Similarity=0.062 Sum_probs=49.5
Q ss_pred HHHHHHHhCCCCCcEEECCCc--hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 594 ILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 594 ~L~~L~~~lnLs~~V~ftG~~--tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
.++.+. ..|++++|.|+|.. .+...+|+.|||++-|+. ++.|.+++|||+||+|||+...+
T Consensus 488 ~~~~~~-~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfp---y~GgtTtlEALwmGVPVVTl~G~ 550 (631)
T 3q3e_A 488 YVERFI-KSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFP---FGNTNGIIDMVTLGLVGVCKTGA 550 (631)
T ss_dssp HHHHHH-HHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSS---SCCSHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHH-HcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCc---ccCChHHHHHHHcCCCEEeccCC
Confidence 334433 46888999999995 466699999999999994 46699999999999999996544
No 43
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=98.19 E-value=0.00012 Score=73.24 Aligned_cols=50 Identities=16% Similarity=0.194 Sum_probs=41.0
Q ss_pred CCCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 602 SNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 602 lnLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
..++++|.+.++.+ ...+|+.||+||... -..++.|||++|+|+|+....
T Consensus 284 ~~~~~~v~~~~~~p-~~~lL~~~~~~v~h~------G~~s~~Eal~~GvP~v~~P~~ 333 (400)
T 4amg_A 284 GELPANVRVVEWIP-LGALLETCDAIIHHG------GSGTLLTALAAGVPQCVIPHG 333 (400)
T ss_dssp CCCCTTEEEECCCC-HHHHHTTCSEEEECC------CHHHHHHHHHHTCCEEECCC-
T ss_pred ccCCCCEEEEeecC-HHHHhhhhhheeccC------CccHHHHHHHhCCCEEEecCc
Confidence 46788999988874 678999999998766 356899999999999997654
No 44
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=98.18 E-value=9.8e-05 Score=75.82 Aligned_cols=49 Identities=12% Similarity=0.146 Sum_probs=41.6
Q ss_pred CCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 603 nLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
+++++|.+.++.+. ..++..||++|..+- ..++.|||++|+|+|+-...
T Consensus 265 ~~~~~v~~~~~~~~-~~ll~~~d~~v~~gG------~~t~~Eal~~GvP~v~~p~~ 313 (404)
T 3h4t_A 265 DEGDDCLVVGEVNH-QVLFGRVAAVVHHGG------AGTTTAVTRAGAPQVVVPQK 313 (404)
T ss_dssp SCCTTEEEESSCCH-HHHGGGSSEEEECCC------HHHHHHHHHHTCCEEECCCS
T ss_pred cCCCCEEEecCCCH-HHHHhhCcEEEECCc------HHHHHHHHHcCCCEEEcCCc
Confidence 46789999999765 889999999999882 25899999999999997653
No 45
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=97.93 E-value=2.1e-05 Score=70.86 Aligned_cols=49 Identities=12% Similarity=0.077 Sum_probs=42.0
Q ss_pred CCCCcEEECCCchhHHHHH--HHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 603 NLSKAMLWTPATTRVASLY--SAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 603 nLs~~V~ftG~~tdVasly--sAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
+++++|.+.|+.++ ..++ ++||++|..+ -+.+++|||++|+|+|+....
T Consensus 65 ~~~~~v~~~~~~~~-~~~l~~~~ad~~I~~~------G~~t~~Ea~~~G~P~i~~p~~ 115 (170)
T 2o6l_A 65 TLGLNTRLYKWIPQ-NDLLGHPKTRAFITHG------GANGIYEAIYHGIPMVGIPLF 115 (170)
T ss_dssp TCCTTEEEESSCCH-HHHHTSTTEEEEEECC------CHHHHHHHHHHTCCEEECCCS
T ss_pred cCCCcEEEecCCCH-HHHhcCCCcCEEEEcC------CccHHHHHHHcCCCEEeccch
Confidence 46789999999876 6777 9999999865 358999999999999999874
No 46
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=97.50 E-value=0.0016 Score=75.26 Aligned_cols=57 Identities=18% Similarity=0.089 Sum_probs=46.6
Q ss_pred CCCCC--cEEECC-CchhHH-HHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 602 SNLSK--AMLWTP-ATTRVA-SLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 602 lnLs~--~V~ftG-~~tdVa-slysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
..+++ +|.|+. +...++ .+|++|||+.+||+.-.|+.|..=+=||..|.+-|++--|
T Consensus 589 p~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDG 649 (796)
T 2c4m_A 589 PEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDG 649 (796)
T ss_dssp TTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESST
T ss_pred cccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCC
Confidence 35777 788765 455555 7899999999999744899999999999999999977544
No 47
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=97.27 E-value=0.0035 Score=72.50 Aligned_cols=58 Identities=17% Similarity=0.083 Sum_probs=47.1
Q ss_pred CCCCC--cEEECCC-chhHH-HHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCC
Q 005746 602 SNLSK--AMLWTPA-TTRVA-SLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIEL 659 (679)
Q Consensus 602 lnLs~--~V~ftG~-~tdVa-slysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~ 659 (679)
..+++ +|.|+.- ...++ .+|++|||+.+||+.-.|+.|..=+=||..|.+-|++--|.
T Consensus 599 p~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGa 660 (796)
T 1l5w_A 599 PLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGA 660 (796)
T ss_dssp TTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTT
T ss_pred cccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCe
Confidence 35777 8888764 55555 78999999999997448999999999999999999665443
No 48
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=97.20 E-value=0.0062 Score=70.71 Aligned_cols=56 Identities=16% Similarity=0.055 Sum_probs=45.2
Q ss_pred CCCC--cEEECC-CchhHH-HHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 603 NLSK--AMLWTP-ATTRVA-SLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 603 nLs~--~V~ftG-~~tdVa-slysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
.+++ +|.|+. +...++ .+|++|||+.+||+.-.|+.|..=+=||..|.+-|++--|
T Consensus 624 ~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDG 683 (824)
T 2gj4_A 624 VVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDG 683 (824)
T ss_dssp TTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCT
T ss_pred ccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecC
Confidence 3566 777765 555555 7899999999999744899999999999999998885443
No 49
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=97.19 E-value=0.00057 Score=70.54 Aligned_cols=49 Identities=16% Similarity=0.032 Sum_probs=42.9
Q ss_pred CCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 603 nLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
+++++|.++|+.++ ..+|.+||++|..+ -+.+++|||++|+|+|+....
T Consensus 316 ~~~~~v~~~~~~~~-~~ll~~ad~~V~~~------G~~t~~Ea~~~G~P~i~~p~~ 364 (441)
T 2yjn_A 316 NIPDNVRTVGFVPM-HALLPTCAATVHHG------GPGSWHTAAIHGVPQVILPDG 364 (441)
T ss_dssp SCCSSEEECCSCCH-HHHGGGCSEEEECC------CHHHHHHHHHTTCCEEECCCS
T ss_pred cCCCCEEEecCCCH-HHHHhhCCEEEECC------CHHHHHHHHHhCCCEEEeCCc
Confidence 46789999999887 78999999999866 357999999999999999873
No 50
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=96.87 E-value=0.0049 Score=62.81 Aligned_cols=49 Identities=12% Similarity=0.120 Sum_probs=42.6
Q ss_pred CCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 603 nLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
.++++|.+.++.++. .+|+.||++|..+ -..+++|||++|+|+|+....
T Consensus 302 ~~~~~v~~~~~~~~~-~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~i~~p~~ 350 (424)
T 2iya_A 302 EVPPNVEVHQWVPQL-DILTKASAFITHA------GMGSTMEALSNAVPMVAVPQI 350 (424)
T ss_dssp SCCTTEEEESSCCHH-HHHTTCSEEEECC------CHHHHHHHHHTTCCEEECCCS
T ss_pred cCCCCeEEecCCCHH-HHHhhCCEEEECC------chhHHHHHHHcCCCEEEecCc
Confidence 367899999998887 8999999999876 247999999999999998764
No 51
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.43 E-value=0.0084 Score=67.82 Aligned_cols=63 Identities=13% Similarity=0.120 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhCCCC-CcEEECCCc--hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeC
Q 005746 591 VKEILEFLSQHSNLS-KAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQ 656 (679)
Q Consensus 591 ~k~~L~~L~~~lnLs-~~V~ftG~~--tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~ 656 (679)
.+..++...+..|+. ++|.|++.. .+--..|..+||++=+-- =+=|.++.||+.+|+|||+=.
T Consensus 564 ~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~Di~LDt~p---~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 564 GEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLDTPL---CNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp GHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGCSEEECCSS---SCCSHHHHHHHHTTCCEEBCC
T ss_pred HHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCCeEEeCCCC---cCCHHHHHHHHHcCCCEEEcc
Confidence 345566666677885 689999985 456678889999986653 245789999999999998744
No 52
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=96.41 E-value=0.0042 Score=63.14 Aligned_cols=96 Identities=15% Similarity=0.182 Sum_probs=63.4
Q ss_pred CCCcccccCCCCccccCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchhH
Q 005746 538 SPSLFTSIGNTDAVSFGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRV 617 (679)
Q Consensus 538 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~tdV 617 (679)
.+.+.-+.|.+|. .....+++..+.... + ..| +.|.+.. . .+.++...+.. .++...++.+++
T Consensus 157 ~~~ILv~~GG~d~-----~~l~~~vl~~L~~~~-~-i~v---v~G~~~~---~-~~~l~~~~~~~---~~v~v~~~~~~m 219 (282)
T 3hbm_A 157 KYDFFICMGGTDI-----KNLSLQIASELPKTK-I-ISI---ATSSSNP---N-LKKLQKFAKLH---NNIRLFIDHENI 219 (282)
T ss_dssp CEEEEEECCSCCT-----TCHHHHHHHHSCTTS-C-EEE---EECTTCT---T-HHHHHHHHHTC---SSEEEEESCSCH
T ss_pred CCeEEEEECCCch-----hhHHHHHHHHhhcCC-C-EEE---EECCCch---H-HHHHHHHHhhC---CCEEEEeCHHHH
Confidence 4555555666664 123456776665532 3 223 3566421 1 23344444432 379999999999
Q ss_pred HHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCC
Q 005746 618 ASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQI 657 (679)
Q Consensus 618 aslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~ 657 (679)
+.+|++||+.|.+. |.++.|++++|+|.|.-..
T Consensus 220 ~~~m~~aDlvI~~g-------G~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 220 AKLMNESNKLIISA-------SSLVNEALLLKANFKAICY 252 (282)
T ss_dssp HHHHHTEEEEEEES-------SHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHCCEEEECC-------cHHHHHHHHcCCCEEEEeC
Confidence 99999999999843 5799999999999988654
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.10 E-value=0.031 Score=55.40 Aligned_cols=42 Identities=21% Similarity=0.198 Sum_probs=34.2
Q ss_pred cEEECCCc--hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEe
Q 005746 607 AMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNIS 655 (679)
Q Consensus 607 ~V~ftG~~--tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S 655 (679)
.+.+.|.+ .+++.+++.||++|-+.. |.+-+ |.|+|+|+|+-
T Consensus 243 ~~~l~g~~sl~e~~ali~~a~l~I~~Ds------g~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 243 CRNLAGETQLDQAVILIAACKAIVTNDS------GLMHV-AAALNRPLVAL 286 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTSSEEEEESS------HHHHH-HHHTTCCEEEE
T ss_pred eEeccCcCCHHHHHHHHHhCCEEEecCC------HHHHH-HHHcCCCEEEE
Confidence 34677875 699999999999999974 44555 99999999985
No 54
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=94.98 E-value=0.023 Score=58.14 Aligned_cols=49 Identities=10% Similarity=0.061 Sum_probs=41.4
Q ss_pred CCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 603 nLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
+++++|.+.|+.+. ..+|.+||++|..+- ..+++|||++|+|+|+....
T Consensus 282 ~~~~~v~~~~~~~~-~~~l~~~d~~v~~~G------~~t~~Ea~~~G~P~i~~p~~ 330 (415)
T 1iir_A 282 DDGADCFAIGEVNH-QVLFGRVAAVIHHGG------AGTTHVAARAGAPQILLPQM 330 (415)
T ss_dssp SCGGGEEECSSCCH-HHHGGGSSEEEECCC------HHHHHHHHHHTCCEEECCCS
T ss_pred CCCCCEEEeCcCCh-HHHHhhCCEEEeCCC------hhHHHHHHHcCCCEEECCCC
Confidence 46678999999877 478899999998772 37999999999999998764
No 55
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=94.64 E-value=0.032 Score=56.91 Aligned_cols=49 Identities=10% Similarity=0.110 Sum_probs=41.7
Q ss_pred CCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 603 NLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 603 nLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
.++++|.+.++.+ ...+|.+||++|..+ + ..++.|||++|+|+|+-...
T Consensus 283 ~~~~~v~~~~~~~-~~~ll~~~d~~v~~~---G---~~t~~Ea~~~G~P~i~~p~~ 331 (416)
T 1rrv_A 283 DDRDDCFAIDEVN-FQALFRRVAAVIHHG---S---AGTEHVATRAGVPQLVIPRN 331 (416)
T ss_dssp CCCTTEEEESSCC-HHHHGGGSSEEEECC---C---HHHHHHHHHHTCCEEECCCS
T ss_pred CCCCCEEEeccCC-hHHHhccCCEEEecC---C---hhHHHHHHHcCCCEEEccCC
Confidence 4678899999976 688999999999876 2 46999999999999997663
No 56
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=93.12 E-value=0.88 Score=46.51 Aligned_cols=56 Identities=16% Similarity=0.264 Sum_probs=41.4
Q ss_pred HHHHHHHHhCCCCCcEEECCCc--hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeC
Q 005746 593 EILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQ 656 (679)
Q Consensus 593 ~~L~~L~~~lnLs~~V~ftG~~--tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~ 656 (679)
+..+.+.+..+ ...+.++|.+ .+++.+++.||++|-+- -|.+-+ |.|+|+|+|+-=
T Consensus 230 ~~~~~i~~~~~-~~~~~l~g~~sl~e~~ali~~a~~~i~~D------sG~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 230 EMVQPVVEQME-TKPIVATGKFQLGPLAAAMNRCNLLITND------SGPMHV-GISQGVPIVALY 287 (349)
T ss_dssp HHHHHHHHTCS-SCCEECTTCCCHHHHHHHHHTCSEEEEES------SHHHHH-HHTTTCCEEEEC
T ss_pred HHHHHHHHhcc-cccEEeeCCCCHHHHHHHHHhCCEEEECC------CCHHHH-HHhcCCCEEEEE
Confidence 34455555443 2456777874 58999999999999995 266777 999999999863
No 57
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=86.23 E-value=0.57 Score=46.42 Aligned_cols=46 Identities=9% Similarity=0.176 Sum_probs=39.2
Q ss_pred cEEECCCchhHHHHHH-HcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 607 AMLWTPATTRVASLYS-AADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 607 ~V~ftG~~tdVaslys-AADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
.+...++.+++..+|+ +||++|.-+= ..+++||+++|+|.|.-...
T Consensus 115 ~v~v~~f~~~m~~~l~~~AdlvIshaG------agTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 115 KVIGFDFSTKMQSIIRDYSDLVISHAG------TGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp EEEECCSSSSHHHHHHHHCSCEEESSC------HHHHHHHHHTTCCCCEECCS
T ss_pred eEEEeeccchHHHHHHhcCCEEEECCc------HHHHHHHHHhCCCEEEEcCc
Confidence 5667799999999999 9999998772 45999999999999886543
No 58
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=81.53 E-value=4.9 Score=39.63 Aligned_cols=54 Identities=19% Similarity=0.181 Sum_probs=39.7
Q ss_pred HHHHHHHHHhCCCCCcEEECCCc--hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEe
Q 005746 592 KEILEFLSQHSNLSKAMLWTPAT--TRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNIS 655 (679)
Q Consensus 592 k~~L~~L~~~lnLs~~V~ftG~~--tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S 655 (679)
++..+.+.+. ++ .+.++|.+ .+.+.+++.||++|-+-. |.+-+ |.|+|+|+|+=
T Consensus 223 ~~~~~~i~~~--~~-~~~l~g~~sl~el~ali~~a~l~I~~DS------G~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 223 EERAKRLAEG--FA-YVEVLPKMSLEGVARVLAGAKFVVSVDT------GLSHL-TAALDRPNITV 278 (326)
T ss_dssp HHHHHHHHTT--CT-TEEECCCCCHHHHHHHHHTCSEEEEESS------HHHHH-HHHTTCCEEEE
T ss_pred HHHHHHHHhh--CC-cccccCCCCHHHHHHHHHhCCEEEecCC------cHHHH-HHHcCCCEEEE
Confidence 3444555543 33 35677764 589999999999999953 66777 77899999975
No 59
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=76.79 E-value=4 Score=41.46 Aligned_cols=54 Identities=13% Similarity=0.156 Sum_probs=38.9
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEc
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLED 300 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~ 300 (679)
.+||+++. ....|--.-++.||.+|.++||+|++++.. ...+.+...|+++++.
T Consensus 12 ~~~Il~~~--~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~---~~~~~~~~~g~~~~~~ 65 (424)
T 2iya_A 12 PRHISFFN--IPGHGHVNPSLGIVQELVARGHRVSYAITD---EFAAQVKAAGATPVVY 65 (424)
T ss_dssp CCEEEEEC--CSCHHHHHHHHHHHHHHHHTTCEEEEEECG---GGHHHHHHHTCEEEEC
T ss_pred cceEEEEe--CCCCcccchHHHHHHHHHHCCCeEEEEeCH---HHHHHHHhCCCEEEec
Confidence 36888863 223466677999999999999999987632 3455566678887764
No 60
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=75.31 E-value=37 Score=40.19 Aligned_cols=77 Identities=14% Similarity=0.121 Sum_probs=56.0
Q ss_pred CCCCCC-hHHHHHHHHHHHH-------hCCCCC--cEEECCC--chhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcC
Q 005746 582 GSKSNK-VPYVKEILEFLSQ-------HSNLSK--AMLWTPA--TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFG 649 (679)
Q Consensus 582 Gs~snk-~~y~k~~L~~L~~-------~lnLs~--~V~ftG~--~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~G 649 (679)
|.|+.+ ...-|.+++.+.+ +..+.+ +|.|++- .+-...++.||||....|+.-.|.-|..=+=||.-|
T Consensus 654 aGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNG 733 (879)
T 1ygp_A 654 GGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNG 733 (879)
T ss_dssp ECCCCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTT
T ss_pred eccCCCCcHHHHHHHHHHHHHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcC
Confidence 334433 3445555544433 223666 7888887 345557899999999999866899999999999999
Q ss_pred CCEEEeCCC
Q 005746 650 VPKNISQIE 658 (679)
Q Consensus 650 lPVV~S~~g 658 (679)
.+.++|--|
T Consensus 734 aLtlgtlDG 742 (879)
T 1ygp_A 734 GLIIGTVDG 742 (879)
T ss_dssp CEEEEESCT
T ss_pred Ceeeecccc
Confidence 999988644
No 61
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=71.76 E-value=8.2 Score=39.14 Aligned_cols=71 Identities=21% Similarity=0.250 Sum_probs=46.3
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcchhhh-cCcCEEEEcchh
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTS-MKADLVIAGSAV 321 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~sfk~~-~kaDLVia~Sav 321 (679)
+||.+ ++.||+ -|-.+|..|.++|++|++.-........++|.+.|+++........+ . ..+|+|+..+++
T Consensus 5 ~~i~~----iGiGg~--Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l--~~~~~d~vV~Spgi 76 (326)
T 3eag_A 5 KHIHI----IGIGGT--FMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQL--DEFKADVYVIGNVA 76 (326)
T ss_dssp CEEEE----ESCCSH--HHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGG--GSCCCSEEEECTTC
T ss_pred cEEEE----EEECHH--HHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHc--CCCCCCEEEECCCc
Confidence 45544 456666 34468889999999998764332233556788899999854222111 1 358999987765
No 62
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=70.67 E-value=8.6 Score=39.94 Aligned_cols=73 Identities=19% Similarity=0.125 Sum_probs=42.8
Q ss_pred cCCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCC-----CCChhHHhcCCeEEEEcCCCc-------ch
Q 005746 239 FVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKR-----GGLMPELARRKIKVLEDRGEP-------SF 306 (679)
Q Consensus 239 ~~~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~-----GgL~~EL~rrgIkVl~~r~~~-------sf 306 (679)
+|+++||+++ |+ +-....+...|.+.|++|.+|+...+ ..+.+...+.||+++...... .+
T Consensus 19 ~~~~mrIvf~------G~-~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~ 91 (329)
T 2bw0_A 19 YFQSMKIAVI------GQ-SLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDV 91 (329)
T ss_dssp --CCCEEEEE------CC-HHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEETTEECHHH
T ss_pred cCCCCEEEEE------cC-cHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCcccccccccHHH
Confidence 4567899988 33 43344556778888999987765221 123333456799987643211 11
Q ss_pred ---hhhcCcCEEEEc
Q 005746 307 ---KTSMKADLVIAG 318 (679)
Q Consensus 307 ---k~~~kaDLVia~ 318 (679)
....++|+++.-
T Consensus 92 ~~~l~~~~~Dliv~a 106 (329)
T 2bw0_A 92 VAKYQALGAELNVLP 106 (329)
T ss_dssp HHHHHTTCCSEEEES
T ss_pred HHHHHhcCCCEEEEe
Confidence 124679998764
No 63
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=69.82 E-value=6.6 Score=39.99 Aligned_cols=52 Identities=17% Similarity=0.190 Sum_probs=36.2
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEE
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLE 299 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~ 299 (679)
||||++. .+..|--.-++.||.+|.++||+|++++... ..+.+...|++++.
T Consensus 1 M~Il~~~--~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~---~~~~v~~~g~~~~~ 52 (415)
T 1iir_A 1 MRVLLAT--CGSRGDTEPLVALAVRVRDLGADVRMCAPPD---CAERLAEVGVPHVP 52 (415)
T ss_dssp CEEEEEC--CSCHHHHHHHHHHHHHHHHTTCEEEEEECGG---GHHHHHHTTCCEEE
T ss_pred CeEEEEc--CCCchhHHHHHHHHHHHHHCCCeEEEEcCHH---HHHHHHHcCCeeee
Confidence 4777763 3445666679999999999999999876332 34445556776654
No 64
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=66.89 E-value=5.8 Score=40.72 Aligned_cols=54 Identities=11% Similarity=0.201 Sum_probs=38.6
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEc
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLED 300 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~ 300 (679)
.+|||++ ..+.+|--.-++.||.+|.++||+|++++. ..+.+.+...|++++..
T Consensus 20 ~mrIl~~--~~~~~GHv~p~l~la~~L~~~GheV~~~~~---~~~~~~v~~~G~~~~~i 73 (441)
T 2yjn_A 20 HMRVVFS--SMASKSHLFGLVPLAWAFRAAGHEVRVVAS---PALTEDITAAGLTAVPV 73 (441)
T ss_dssp CCEEEEE--CCSCHHHHTTTHHHHHHHHHTTCEEEEEEC---GGGHHHHHTTTCCEEEC
T ss_pred ccEEEEE--cCCCcchHhHHHHHHHHHHHCCCeEEEEeC---chhHHHHHhCCCceeec
Confidence 3688887 223345555689999999999999998763 23455566788888754
No 65
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=64.51 E-value=5.8 Score=40.31 Aligned_cols=52 Identities=15% Similarity=0.114 Sum_probs=36.5
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEE
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLE 299 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~ 299 (679)
||||++.. +..|--.-++.||.+|.++||+|++++.. ...+.+...|+++++
T Consensus 1 MrIl~~~~--~~~GH~~p~l~la~~L~~~Gh~V~~~~~~---~~~~~v~~~g~~~~~ 52 (416)
T 1rrv_A 1 MRVLLSVC--GTRGDVEIGVALADRLKALGVQTRMCAPP---AAEERLAEVGVPHVP 52 (416)
T ss_dssp CEEEEEEE--SCHHHHHHHHHHHHHHHHTTCEEEEEECG---GGHHHHHHHTCCEEE
T ss_pred CeEEEEec--CCCccHHHHHHHHHHHHHCCCeEEEEeCH---HHHHHHHHcCCeeee
Confidence 57887743 24555667999999999999999987632 244445566777765
No 66
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=63.83 E-value=27 Score=32.49 Aligned_cols=59 Identities=24% Similarity=0.243 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCe-EEEEcCCCcch-hhhcCcCEEEEcch
Q 005746 260 SMMELATELLSCGATVSAVVLSKRGGLMPELARRKI-KVLEDRGEPSF-KTSMKADLVIAGSA 320 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgI-kVl~~r~~~sf-k~~~kaDLVia~Sa 320 (679)
.-..++.+|++.|++|.+++ +...-.+++...++ .++.......+ .....+|+|+.+..
T Consensus 33 iG~~l~~~L~~~G~~V~~~~--R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag 93 (236)
T 3e8x_A 33 VARYLLSELKNKGHEPVAMV--RNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAG 93 (236)
T ss_dssp HHHHHHHHHHHTTCEEEEEE--SSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCC
T ss_pred HHHHHHHHHHhCCCeEEEEE--CChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCC
Confidence 45588889999999988765 33334556666788 87753322222 22346899986543
No 67
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=63.43 E-value=12 Score=40.61 Aligned_cols=71 Identities=21% Similarity=0.214 Sum_probs=47.3
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcchhhhcCcCEEEEcchh
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAV 321 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~sfk~~~kaDLVia~Sav 321 (679)
++|.+ ++.||. -|-.+|..|.+.|++|++.-........++|.+.||++........+ ...+|+|+..+++
T Consensus 20 ~~i~~----iGiGg~--Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~--~~~~d~vV~Spgi 90 (524)
T 3hn7_A 20 MHIHI----LGICGT--FMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHL--QPAPDLVVVGNAM 90 (524)
T ss_dssp CEEEE----ETTTSH--HHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGG--CSCCSEEEECTTC
T ss_pred CEEEE----EEecHh--hHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHc--CCCCCEEEECCCc
Confidence 45544 467776 56678889999999998654322233456788899999764322111 2358999988765
No 68
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=60.25 E-value=7.7 Score=41.11 Aligned_cols=46 Identities=17% Similarity=0.157 Sum_probs=36.4
Q ss_pred CCcEEECCCchhHHHHHH--HcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCC
Q 005746 605 SKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPKNISQI 657 (679)
Q Consensus 605 s~~V~ftG~~tdVaslys--AADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~ 657 (679)
+++++..++.+.. .+|+ ++|+||.-.- ...++||+++|+|+|+-..
T Consensus 324 ~~~~~v~~w~pq~-~vL~h~~~~~fvth~G------~~S~~Eal~~GvP~i~~P~ 371 (456)
T 2c1x_A 324 RGYGMVVPWAPQA-EVLAHEAVGAFVTHCG------WNSLWESVAGGVPLICRPF 371 (456)
T ss_dssp TTTEEEESCCCHH-HHHTSTTEEEEEECCC------HHHHHHHHHHTCCEEECCC
T ss_pred CCceEEecCCCHH-HHhcCCcCCEEEecCC------cchHHHHHHhCceEEecCC
Confidence 3567777776664 6888 8899998772 5699999999999999765
No 69
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=54.01 E-value=17 Score=35.91 Aligned_cols=83 Identities=11% Similarity=0.229 Sum_probs=44.5
Q ss_pred cccCCcccccccC--CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhc-CCeEEEEcCCCc
Q 005746 228 GTCDRKGDFARFV--WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELAR-RKIKVLEDRGEP 304 (679)
Q Consensus 228 ~~c~~k~~f~~~~--~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~r-rgIkVl~~r~~~ 304 (679)
|..+-..-|+-|+ ..+++|+| ||++ .....++.|+++|++|+++.... ..-..+|.. -++.++......
T Consensus 15 ~~~~~~~~~Pifl~L~gk~VLVV------GgG~-va~~ka~~Ll~~GA~VtVvap~~-~~~l~~l~~~~~i~~i~~~~~~ 86 (223)
T 3dfz_A 15 GHIEGRHMYTVMLDLKGRSVLVV------GGGT-IATRRIKGFLQEGAAITVVAPTV-SAEINEWEAKGQLRVKRKKVGE 86 (223)
T ss_dssp -------CCEEEECCTTCCEEEE------CCSH-HHHHHHHHHGGGCCCEEEECSSC-CHHHHHHHHTTSCEEECSCCCG
T ss_pred CcccccCccccEEEcCCCEEEEE------CCCH-HHHHHHHHHHHCCCEEEEECCCC-CHHHHHHHHcCCcEEEECCCCH
Confidence 3333333444443 34678887 4443 56677888999999998775321 111223333 457776432221
Q ss_pred chhhhcCcCEEEEcch
Q 005746 305 SFKTSMKADLVIAGSA 320 (679)
Q Consensus 305 sfk~~~kaDLVia~Sa 320 (679)
.....+|+||+.+.
T Consensus 87 --~dL~~adLVIaAT~ 100 (223)
T 3dfz_A 87 --EDLLNVFFIVVATN 100 (223)
T ss_dssp --GGSSSCSEEEECCC
T ss_pred --hHhCCCCEEEECCC
Confidence 22356899998763
No 70
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=53.07 E-value=13 Score=39.29 Aligned_cols=45 Identities=22% Similarity=0.200 Sum_probs=35.5
Q ss_pred CcEEECCCchhHHHHHH--HcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCC
Q 005746 606 KAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPKNISQI 657 (679)
Q Consensus 606 ~~V~ftG~~tdVaslys--AADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~ 657 (679)
++++..++.+.+ .+|+ ++|+||.-.- ...++||+++|+|+|+-..
T Consensus 332 ~~~~v~~w~pq~-~vL~h~~~~~fvth~G------~~s~~Eal~~GvP~i~~P~ 378 (463)
T 2acv_A 332 GKGMICGWAPQV-EVLAHKAIGGFVSHCG------WNSILESMWFGVPILTWPI 378 (463)
T ss_dssp CSEEEESSCCHH-HHHHSTTEEEEEECCC------HHHHHHHHHTTCCEEECCC
T ss_pred CCEEEEccCCHH-HHhCCCccCeEEecCC------chhHHHHHHcCCCeeeccc
Confidence 467777776665 5675 8999998772 4699999999999999765
No 71
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=52.93 E-value=19 Score=38.80 Aligned_cols=65 Identities=18% Similarity=0.244 Sum_probs=42.1
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcchhhhcCcCEEEEcchhH
Q 005746 252 LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAVC 322 (679)
Q Consensus 252 LsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~sfk~~~kaDLVia~Sav~ 322 (679)
++.||.- |-.+|..|.+.|++|++.-. ......++|.+.||++....... ....+|+|+..+++.
T Consensus 28 iGiG~sG--~s~~A~~l~~~G~~V~~~D~-~~~~~~~~l~~~gi~~~~g~~~~---~~~~~d~vV~Spgi~ 92 (494)
T 4hv4_A 28 VGIGGAG--MGGIAEVLANEGYQISGSDL-APNSVTQHLTALGAQIYFHHRPE---NVLDASVVVVSTAIS 92 (494)
T ss_dssp ETTTSTT--HHHHHHHHHHTTCEEEEECS-SCCHHHHHHHHTTCEEESSCCGG---GGTTCSEEEECTTSC
T ss_pred EEEcHhh--HHHHHHHHHhCCCeEEEEEC-CCCHHHHHHHHCCCEEECCCCHH---HcCCCCEEEECCCCC
Confidence 3556652 33478999999999986532 12234567888999987542211 124589999887653
No 72
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=52.89 E-value=23 Score=32.27 Aligned_cols=59 Identities=15% Similarity=0.044 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcC-CCcchhhhcCcCEEEEcch
Q 005746 260 SMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDR-GEPSFKTSMKADLVIAGSA 320 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r-~~~sfk~~~kaDLVia~Sa 320 (679)
.-..|+.+|++.|++|.+++ +...-.+++...+++++... .+........+|+|+....
T Consensus 12 iG~~l~~~L~~~g~~V~~~~--R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 12 AGSAIVAEARRRGHEVLAVV--RDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALS 71 (224)
T ss_dssp HHHHHHHHHHHTTCEEEEEE--SCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEE--ecccccccccCCCceEEecccccccHhhcccCCEEEECCc
Confidence 45588889999999998775 33222344545678877532 1111133457898876543
No 73
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=51.16 E-value=21 Score=34.02 Aligned_cols=52 Identities=15% Similarity=0.081 Sum_probs=34.4
Q ss_pred HHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcC-CCcchhhhcCcCEEEEc
Q 005746 262 MELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDR-GEPSFKTSMKADLVIAG 318 (679)
Q Consensus 262 meLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r-~~~sfk~~~kaDLVia~ 318 (679)
-.|+..|++.|++|.+++ +...-...+...+++++... .+.. ...+|.|+..
T Consensus 18 ~~l~~~L~~~g~~V~~~~--r~~~~~~~~~~~~~~~~~~D~~d~~---~~~~d~vi~~ 70 (286)
T 3ius_A 18 RVLSRALAPQGWRIIGTS--RNPDQMEAIRASGAEPLLWPGEEPS---LDGVTHLLIS 70 (286)
T ss_dssp HHHHHHHGGGTCEEEEEE--SCGGGHHHHHHTTEEEEESSSSCCC---CTTCCEEEEC
T ss_pred HHHHHHHHHCCCEEEEEE--cChhhhhhHhhCCCeEEEecccccc---cCCCCEEEEC
Confidence 377889999999998775 33333455666788877532 2222 4578988754
No 74
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=50.21 E-value=15 Score=38.88 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=34.3
Q ss_pred CCcEEECCCchhHHHHHHHcCE--EEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 605 SKAMLWTPATTRVASLYSAADV--YVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 605 s~~V~ftG~~tdVaslysAADV--~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
+++++..++.+.. .+|+.++| ||.-. =...++||+++|+|+|+-...
T Consensus 352 ~~~~~v~~~~pq~-~~L~h~~~~~~vth~------G~~s~~Eal~~GvP~i~~P~~ 400 (482)
T 2pq6_A 352 ADRGLIASWCPQD-KVLNHPSIGGFLTHC------GWNSTTESICAGVPMLCWPFF 400 (482)
T ss_dssp TTTEEEESCCCHH-HHHTSTTEEEEEECC------CHHHHHHHHHHTCCEEECCCS
T ss_pred CCCEEEEeecCHH-HHhcCCCCCEEEecC------CcchHHHHHHcCCCEEecCcc
Confidence 3567777776665 48866555 76655 146899999999999997654
No 75
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=48.69 E-value=26 Score=37.10 Aligned_cols=71 Identities=15% Similarity=0.093 Sum_probs=44.6
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCC--CCChhHHhcCCeEEEEcCCCcchhhhcC-cCEEEEc
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKR--GGLMPELARRKIKVLEDRGEPSFKTSMK-ADLVIAG 318 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~--GgL~~EL~rrgIkVl~~r~~~sfk~~~k-aDLVia~ 318 (679)
.+||++| +.||+ .|.+|..|.++|++|++.-.... ....++|.+.||++......... ... +|+|+..
T Consensus 9 ~k~v~vi----G~G~s---G~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~--~~~~~d~vv~s 79 (451)
T 3lk7_A 9 NKKVLVL----GLARS---GEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLEL--LDEDFCYMIKN 79 (451)
T ss_dssp TCEEEEE----CCTTT---HHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGG--GGSCEEEEEEC
T ss_pred CCEEEEE----eeCHH---HHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHh--hcCCCCEEEEC
Confidence 4677665 44544 33468999999999987643211 23445788899998854332211 124 8999987
Q ss_pred chh
Q 005746 319 SAV 321 (679)
Q Consensus 319 Sav 321 (679)
+++
T Consensus 80 pgi 82 (451)
T 3lk7_A 80 PGI 82 (451)
T ss_dssp TTS
T ss_pred CcC
Confidence 765
No 76
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=46.90 E-value=35 Score=28.67 Aligned_cols=39 Identities=13% Similarity=0.226 Sum_probs=29.0
Q ss_pred CeEEEEeCCCCCC-CHHHHHHHHHHHHHHC-CC-eEEEEEeC
Q 005746 243 RKFILIFHELSMT-GAPLSMMELATELLSC-GA-TVSAVVLS 281 (679)
Q Consensus 243 rKILlI~heLsmg-GAplsmmeLAteL~s~-G~-~VsaVvLs 281 (679)
+|+++|++.-..+ ......+.+|..+.+. |+ +|.++...
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 3788888876553 4456678999999888 99 99776543
No 77
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=45.73 E-value=44 Score=30.12 Aligned_cols=57 Identities=16% Similarity=0.283 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcC-CCcchhhhcCcCEEEEcc
Q 005746 260 SMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDR-GEPSFKTSMKADLVIAGS 319 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r-~~~sfk~~~kaDLVia~S 319 (679)
.-..|+.+|++.|++|.+++ +...-.+++. .++.++... .+........+|+||...
T Consensus 12 iG~~l~~~L~~~g~~V~~~~--R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~a 69 (221)
T 3ew7_A 12 AGSRILEEAKNRGHEVTAIV--RNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAY 69 (221)
T ss_dssp HHHHHHHHHHHTTCEEEEEE--SCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECC
T ss_pred hHHHHHHHHHhCCCEEEEEE--cCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECC
Confidence 44578889999999998765 3322233333 567776532 111113345689988654
No 78
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=43.92 E-value=25 Score=34.73 Aligned_cols=52 Identities=17% Similarity=0.181 Sum_probs=40.0
Q ss_pred HHHHHHhCCCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEe
Q 005746 595 LEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNIS 655 (679)
Q Consensus 595 L~~L~~~lnLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S 655 (679)
.+.+++.+|.+. .+++.+++..+|++++.+. .....-.+++|+..|++|++-
T Consensus 45 ~~~~a~~~~~~~-------~~~~~~ll~~~D~V~i~tp--~~~h~~~~~~al~~gk~vl~E 96 (308)
T 3uuw_A 45 REKICSDYRIMP-------FDSIESLAKKCDCIFLHSS--TETHYEIIKILLNLGVHVYVD 96 (308)
T ss_dssp HHHHHHHHTCCB-------CSCHHHHHTTCSEEEECCC--GGGHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCCC-------cCCHHHHHhcCCEEEEeCC--cHhHHHHHHHHHHCCCcEEEc
Confidence 445566666542 4677888889999999986 666777889999999998864
No 79
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=42.83 E-value=83 Score=27.16 Aligned_cols=73 Identities=16% Similarity=0.192 Sum_probs=45.9
Q ss_pred eCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeC
Q 005746 581 VGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQ 656 (679)
Q Consensus 581 VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~ 656 (679)
.|+|..-. .+.+.++......|+.-.|.-.+ ..++...+..+|+++...+ +.+-+..+--.+--.+.||+.-+
T Consensus 11 C~~G~~TS-ll~~kl~~~~~~~gi~~~i~~~~-~~~~~~~~~~~D~Ii~t~~-l~~~~~~~~~~~~~~~~pv~~I~ 83 (109)
T 2l2q_A 11 CGAGMSTS-MLVQRIEKYAKSKNINATIEAIA-ETRLSEVVDRFDVVLLAPQ-SRFNKKRLEEITKPKGIPIEIIN 83 (109)
T ss_dssp SSSSCSSC-HHHHHHHHHHHHHTCSEEEEEEC-STTHHHHTTTCSEEEECSC-CSSHHHHHHHHHHHHTCCEEECC
T ss_pred CCChHhHH-HHHHHHHHHHHHCCCCeEEEEec-HHHHHhhcCCCCEEEECCc-cHHHHHHHHHHhcccCCCEEEEC
Confidence 45554444 67777877777788864454333 4466777889999999987 44444433222233689997543
No 80
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=42.65 E-value=20 Score=35.85 Aligned_cols=53 Identities=11% Similarity=0.013 Sum_probs=41.2
Q ss_pred HHHHHHHhCCCCCcEEECCCchhHHHHHHH--cCEEEEcCCCCCCCccHHHHHHHHcCCCEEE
Q 005746 594 ILEFLSQHSNLSKAMLWTPATTRVASLYSA--ADVYVINSQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 594 ~L~~L~~~lnLs~~V~ftG~~tdVaslysA--ADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
..+.+++++|++. ..++..++++. .|++++.+. ...-.-.+++|+.+|++|++
T Consensus 61 ~a~~~a~~~g~~~------~y~d~~ell~~~~iDaV~I~tP--~~~H~~~~~~al~aGkhVl~ 115 (350)
T 4had_A 61 RAREMADRFSVPH------AFGSYEEMLASDVIDAVYIPLP--TSQHIEWSIKAADAGKHVVC 115 (350)
T ss_dssp HHHHHHHHHTCSE------EESSHHHHHHCSSCSEEEECSC--GGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCCe------eeCCHHHHhcCCCCCEEEEeCC--CchhHHHHHHHHhcCCEEEE
Confidence 3556777777752 24688888865 799999996 67777789999999999986
No 81
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=42.33 E-value=43 Score=30.11 Aligned_cols=58 Identities=17% Similarity=0.201 Sum_probs=42.2
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHh--cCCeEEEEc
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELA--RRKIKVLED 300 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~--rrgIkVl~~ 300 (679)
||++.|+..-+-.|-....+.||..|.+.|..|.++-+...+.+...+. ..++.+++.
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~~~~~~~~~~~~ 60 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSKAGKAAFDVFTA 60 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHTTSCCSSEEEEC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHhcCCCCCcEEec
Confidence 5788887777777888889999999999999999887765555444332 234555554
No 82
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=42.21 E-value=38 Score=33.97 Aligned_cols=86 Identities=14% Similarity=0.171 Sum_probs=55.0
Q ss_pred cCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchhHHHHHHH--cCEEEEc
Q 005746 553 FGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSA--ADVYVIN 630 (679)
Q Consensus 553 ~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~tdVaslysA--ADV~Vlp 630 (679)
+|.|.--+..+..+....+++.++ +.+... .+..+.+++.+|+... ..++..+++.. +|++++.
T Consensus 8 IG~G~~g~~~~~~l~~~~~~~~l~--av~d~~-------~~~~~~~~~~~g~~~~-----~~~~~~~ll~~~~~D~V~i~ 73 (344)
T 3mz0_A 8 IGTGAIGKEHINRITNKLSGAEIV--AVTDVN-------QEAAQKVVEQYQLNAT-----VYPNDDSLLADENVDAVLVT 73 (344)
T ss_dssp ECCSHHHHHHHHHHHHTCSSEEEE--EEECSS-------HHHHHHHHHHTTCCCE-----EESSHHHHHHCTTCCEEEEC
T ss_pred ECccHHHHHHHHHHHhhCCCcEEE--EEEcCC-------HHHHHHHHHHhCCCCe-----eeCCHHHHhcCCCCCEEEEC
Confidence 444444444555555345565444 334431 2334556666765211 24788888886 8999999
Q ss_pred CCCCCCCccHHHHHHHHcCCCEEE
Q 005746 631 SQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 631 Sq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
+. ...---.+++|+..|++|++
T Consensus 74 tp--~~~h~~~~~~al~~Gk~vl~ 95 (344)
T 3mz0_A 74 SW--GPAHESSVLKAIKAQKYVFC 95 (344)
T ss_dssp SC--GGGHHHHHHHHHHTTCEEEE
T ss_pred CC--chhHHHHHHHHHHCCCcEEE
Confidence 85 66677788999999999987
No 83
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=41.54 E-value=59 Score=31.40 Aligned_cols=66 Identities=17% Similarity=0.090 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHHhCCCCCcEEECC----CchhHHHHHHHcCEEEEcCCCCCCCccH-----------HHHHHHHcCCCE
Q 005746 588 VPYVKEILEFLSQHSNLSKAMLWTP----ATTRVASLYSAADVYVINSQGLGETFGR-----------VTIEAMAFGVPK 652 (679)
Q Consensus 588 ~~y~k~~L~~L~~~lnLs~~V~ftG----~~tdVaslysAADV~VlpSq~~~EgFGr-----------V~IEAMA~GlPV 652 (679)
..|+....+.+. ++|. .|..+. ..++..+.+..||++++|- +++|-. ++-|+.+.|.|+
T Consensus 43 ~~~~~s~~~a~~-~lG~--~v~~~~i~~~~~~~~~~~l~~ad~I~l~G---G~~~~l~~~L~~~gl~~~l~~~~~~G~p~ 116 (206)
T 3l4e_A 43 TFYVEAGKKALE-SLGL--LVEELDIATESLGEITTKLRKNDFIYVTG---GNTFFLLQELKRTGADKLILEEIAAGKLY 116 (206)
T ss_dssp CHHHHHHHHHHH-HTTC--EEEECCTTTSCHHHHHHHHHHSSEEEECC---SCHHHHHHHHHHHTHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHH-HcCC--eEEEEEecCCChHHHHHHHHhCCEEEECC---CCHHHHHHHHHHCChHHHHHHHHHcCCeE
Confidence 467777666654 4777 477773 5567778899999999987 676633 567888889999
Q ss_pred EEeCCCC
Q 005746 653 NISQIEL 659 (679)
Q Consensus 653 V~S~~g~ 659 (679)
+++-+|.
T Consensus 117 ~G~sAGa 123 (206)
T 3l4e_A 117 IGESAGA 123 (206)
T ss_dssp EEETHHH
T ss_pred EEECHHH
Confidence 9988773
No 84
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=41.20 E-value=28 Score=37.42 Aligned_cols=48 Identities=13% Similarity=0.071 Sum_probs=34.8
Q ss_pred CCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCC
Q 005746 605 SKAMLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQI 657 (679)
Q Consensus 605 s~~V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~ 657 (679)
+++++..++... ..+++.+||-++=+++ | -..++||+++|+|+|+-..
T Consensus 326 ~~~~~vv~w~Pq-~~vL~h~~v~~fvtH~---G-~~S~~Eal~~GvP~i~~P~ 373 (454)
T 3hbf_A 326 KTKGKIVAWAPQ-VEILKHSSVGVFLTHS---G-WNSVLECIVGGVPMISRPF 373 (454)
T ss_dssp TTTEEEESSCCH-HHHHHSTTEEEEEECC---C-HHHHHHHHHHTCCEEECCC
T ss_pred CCceEEEeeCCH-HHHHhhcCcCeEEecC---C-cchHHHHHHcCCCEecCcc
Confidence 456777777666 5889999944444431 1 3589999999999999765
No 85
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=39.95 E-value=20 Score=35.13 Aligned_cols=49 Identities=20% Similarity=0.055 Sum_probs=22.0
Q ss_pred cccccCC-cccccccCCC--CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 005746 226 RSGTCDR-KGDFARFVWS--RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (679)
Q Consensus 226 ~~~~c~~-k~~f~~~~~~--rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVv 279 (679)
.+++|+. +.-|-+-|+. .|+++|+-. +.-.-..+|..|++.|++|.++.
T Consensus 8 ~~~~~~~~~~~~~~~m~~~~~k~~lVTGa-----s~GIG~aia~~la~~G~~V~~~~ 59 (283)
T 3v8b_A 8 SSGVDLGTENLYFQSMMNQPSPVALITGA-----GSGIGRATALALAADGVTVGALG 59 (283)
T ss_dssp -------------------CCCEEEEESC-----SSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccccccchhhhhhhcCCCCCEEEEECC-----CCHHHHHHHHHHHHCCCEEEEEe
Confidence 3566766 3333333332 467777432 22244588999999999987654
No 86
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=39.82 E-value=27 Score=35.23 Aligned_cols=85 Identities=13% Similarity=0.000 Sum_probs=54.7
Q ss_pred cCCc-cchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchhHHHHHH--HcCEEEE
Q 005746 553 FGSG-HLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVI 629 (679)
Q Consensus 553 ~~~~-~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~tdVaslys--AADV~Vl 629 (679)
+|.| .-.+..++.+....+++.++ +++... .+..+.+++.++.+ ...+++.+++. ..|++++
T Consensus 24 IG~G~~~g~~~~~~l~~~~~~~~lv--av~d~~-------~~~~~~~a~~~~~~------~~~~~~~~ll~~~~vD~V~i 88 (340)
T 1zh8_A 24 VGCGIAARELHLPALKNLSHLFEIT--AVTSRT-------RSHAEEFAKMVGNP------AVFDSYEELLESGLVDAVDL 88 (340)
T ss_dssp ECCSHHHHHTHHHHHHTTTTTEEEE--EEECSS-------HHHHHHHHHHHSSC------EEESCHHHHHHSSCCSEEEE
T ss_pred EecCHHHHHHHHHHHHhCCCceEEE--EEEcCC-------HHHHHHHHHHhCCC------cccCCHHHHhcCCCCCEEEE
Confidence 5666 34445566655443565544 334431 22344556666642 23478888887 4899999
Q ss_pred cCCCCCCCccHHHHHHHHcCCCEEE
Q 005746 630 NSQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 630 pSq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
.+. ...-.-.+++|+..|++|++
T Consensus 89 ~tp--~~~H~~~~~~al~aGkhVl~ 111 (340)
T 1zh8_A 89 TLP--VELNLPFIEKALRKGVHVIC 111 (340)
T ss_dssp CCC--GGGHHHHHHHHHHTTCEEEE
T ss_pred eCC--chHHHHHHHHHHHCCCcEEE
Confidence 985 56667788999999999987
No 87
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=38.58 E-value=55 Score=32.79 Aligned_cols=53 Identities=13% Similarity=0.125 Sum_probs=40.3
Q ss_pred HHHHHHhCCCCCcEEECCCchhHHHHHH--HcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEe
Q 005746 595 LEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPKNIS 655 (679)
Q Consensus 595 L~~L~~~lnLs~~V~ftG~~tdVaslys--AADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S 655 (679)
.+.+++.++.+ ...++..+++. .+|++++.+. ...---.+++|+..|++|++-
T Consensus 43 ~~~~~~~~~~~------~~~~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~~gk~vl~E 97 (330)
T 3e9m_A 43 AQKMAKELAIP------VAYGSYEELCKDETIDIIYIPTY--NQGHYSAAKLALSQGKPVLLE 97 (330)
T ss_dssp HHHHHHHTTCC------CCBSSHHHHHHCTTCSEEEECCC--GGGHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHcCCC------ceeCCHHHHhcCCCCCEEEEcCC--CHHHHHHHHHHHHCCCeEEEe
Confidence 44556666654 24578889998 7999999885 566667789999999999873
No 88
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=37.73 E-value=31 Score=36.52 Aligned_cols=37 Identities=19% Similarity=0.224 Sum_probs=28.2
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeC
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLS 281 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs 281 (679)
.+||++ . ....|--.-|++||++|.++||+|++++..
T Consensus 9 ~~vl~~-p-~p~~GHi~P~l~La~~L~~rG~~VT~v~t~ 45 (482)
T 2pq6_A 9 PHVVMI-P-YPVQGHINPLFKLAKLLHLRGFHITFVNTE 45 (482)
T ss_dssp CEEEEE-C-CSSHHHHHHHHHHHHHHHHTTCEEEEEEEH
T ss_pred CEEEEe-c-CccchhHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 455555 3 234677778999999999999999988644
No 89
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=37.52 E-value=39 Score=32.27 Aligned_cols=45 Identities=22% Similarity=0.150 Sum_probs=36.6
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCCh
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLM 287 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~ 287 (679)
+.|++.|+..-+-.|.....+.||..|+ .|..|.++-+...+++.
T Consensus 26 ~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~~~~~ 70 (267)
T 3k9g_A 26 KPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQASIT 70 (267)
T ss_dssp CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTTCHHH
T ss_pred CCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCCCCHH
Confidence 4678888777777788888999999999 99999999887665433
No 90
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=37.33 E-value=70 Score=34.21 Aligned_cols=69 Identities=19% Similarity=0.169 Sum_probs=42.4
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhc-CCeEEEEcCCCcchhhhcCcCEEEEcch
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELAR-RKIKVLEDRGEPSFKTSMKADLVIAGSA 320 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~r-rgIkVl~~r~~~sfk~~~kaDLVia~Sa 320 (679)
.+++|+| ||+. +-...++.|+++|++|+++.... ..-..++.. .+++++....... ....+|+|++.+.
T Consensus 12 ~~~vlVv------GgG~-va~~k~~~L~~~ga~V~vi~~~~-~~~~~~l~~~~~i~~~~~~~~~~--~l~~~~lVi~at~ 81 (457)
T 1pjq_A 12 DRDCLIV------GGGD-VAERKARLLLEAGARLTVNALTF-IPQFTVWANEGMLTLVEGPFDET--LLDSCWLAIAATD 81 (457)
T ss_dssp TCEEEEE------CCSH-HHHHHHHHHHHTTBEEEEEESSC-CHHHHHHHTTTSCEEEESSCCGG--GGTTCSEEEECCS
T ss_pred CCEEEEE------CCCH-HHHHHHHHHHhCcCEEEEEcCCC-CHHHHHHHhcCCEEEEECCCCcc--ccCCccEEEEcCC
Confidence 4677776 4443 66788889999999998875321 111223332 4688776433221 2247899998764
No 91
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=36.87 E-value=25 Score=33.45 Aligned_cols=38 Identities=37% Similarity=0.425 Sum_probs=28.1
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCC
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSK 282 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~ 282 (679)
+.-|+++|.+ +|....+..+|..|.++|+.|.++-+..
T Consensus 51 ~~~VlllHG~--~~s~~~~~~la~~La~~Gy~Via~Dl~G 88 (281)
T 4fbl_A 51 RIGVLVSHGF--TGSPQSMRFLAEGFARAGYTVATPRLTG 88 (281)
T ss_dssp SEEEEEECCT--TCCGGGGHHHHHHHHHTTCEEEECCCTT
T ss_pred CceEEEECCC--CCCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3446678975 5656678889999999999987765543
No 92
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=36.66 E-value=64 Score=33.35 Aligned_cols=71 Identities=20% Similarity=0.236 Sum_probs=41.8
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCC---C-C-------ChhHHhcCCeEEEEcCCCc--ch-
Q 005746 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKR---G-G-------LMPELARRKIKVLEDRGEP--SF- 306 (679)
Q Consensus 241 ~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~---G-g-------L~~EL~rrgIkVl~~r~~~--sf- 306 (679)
.++||+|+ |.|-......+.|.+.||+|.+|+...+ | + +.+...+.||+|+...... .+
T Consensus 6 ~~mrivf~-------Gt~~fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~ 78 (318)
T 3q0i_A 6 QSLRIVFA-------GTPDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDESK 78 (318)
T ss_dssp -CCEEEEE-------CCSHHHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCSCSCSHHHH
T ss_pred cCCEEEEE-------ecCHHHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccCcCCCHHHH
Confidence 35799987 3333444555678888999987765321 1 1 1233456899998532211 11
Q ss_pred --hhhcCcCEEEEc
Q 005746 307 --KTSMKADLVIAG 318 (679)
Q Consensus 307 --k~~~kaDLVia~ 318 (679)
....++|+++.-
T Consensus 79 ~~l~~~~~Dliv~~ 92 (318)
T 3q0i_A 79 QQLAALNADLMVVV 92 (318)
T ss_dssp HHHHTTCCSEEEES
T ss_pred HHHHhcCCCEEEEe
Confidence 235689999864
No 93
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=36.31 E-value=34 Score=35.12 Aligned_cols=52 Identities=13% Similarity=0.129 Sum_probs=39.7
Q ss_pred HHHHHHhCCCCCcEEECCCchhHHHHHHH--cCEEEEcCCCCCCCccHHHHHHHHcCCCEEEe
Q 005746 595 LEFLSQHSNLSKAMLWTPATTRVASLYSA--ADVYVINSQGLGETFGRVTIEAMAFGVPKNIS 655 (679)
Q Consensus 595 L~~L~~~lnLs~~V~ftG~~tdVaslysA--ADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S 655 (679)
.+.+++.+|++ ..+++.+++.. .|++++.+. ....--++++|+..|++|++-
T Consensus 41 ~~~~a~~~g~~-------~~~~~~ell~~~~vD~V~i~tp--~~~H~~~~~~al~aGk~Vl~E 94 (387)
T 3moi_A 41 RERFGKEYGIP-------VFATLAEMMQHVQMDAVYIASP--HQFHCEHVVQASEQGLHIIVE 94 (387)
T ss_dssp HHHHHHHHTCC-------EESSHHHHHHHSCCSEEEECSC--GGGHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCC-------eECCHHHHHcCCCCCEEEEcCC--cHHHHHHHHHHHHCCCceeee
Confidence 34455555653 24788899987 899999996 666677899999999999863
No 94
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=35.69 E-value=52 Score=33.95 Aligned_cols=71 Identities=15% Similarity=0.107 Sum_probs=41.2
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCC--C---------ChhHHhcCCeEEEEcCCCc--ch-
Q 005746 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG--G---------LMPELARRKIKVLEDRGEP--SF- 306 (679)
Q Consensus 241 ~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~G--g---------L~~EL~rrgIkVl~~r~~~--sf- 306 (679)
+++||+|+... -......++|.+.||+|.+|+...+. | ..+...+.||+|+...... .+
T Consensus 1 ~~mrivf~Gtp-------~fa~~~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~~~~~~~~~~ 73 (314)
T 3tqq_A 1 MSLKIVFAGTP-------QFAVPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQPFSLRDEVEQ 73 (314)
T ss_dssp CCCEEEEEECS-------GGGHHHHHHHHHSSSEEEEEECCCC----------CCHHHHHHHHTTCCEECCSCSSSHHHH
T ss_pred CCcEEEEECCC-------HHHHHHHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECcccCCCHHHH
Confidence 46789988432 22334456777889999887653211 1 1133446899988543211 11
Q ss_pred --hhhcCcCEEEEc
Q 005746 307 --KTSMKADLVIAG 318 (679)
Q Consensus 307 --k~~~kaDLVia~ 318 (679)
....++|+++.-
T Consensus 74 ~~l~~~~~Dliv~~ 87 (314)
T 3tqq_A 74 EKLIAMNADVMVVV 87 (314)
T ss_dssp HHHHTTCCSEEEEE
T ss_pred HHHHhcCCCEEEEc
Confidence 235689998763
No 95
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=35.57 E-value=38 Score=34.94 Aligned_cols=71 Identities=21% Similarity=0.300 Sum_probs=45.1
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCC--C---------ChhHHhcCCeEEEEcCCCcchhhhc
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG--G---------LMPELARRKIKVLEDRGEPSFKTSM 310 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~G--g---------L~~EL~rrgIkVl~~r~~~sfk~~~ 310 (679)
.+++++| ||+ ..-+|+|..|.+.|.+|+++.....- . +.+.+.+.||+++....-..+....
T Consensus 146 ~~~vvVI------GgG-~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ig~~~ 218 (385)
T 3klj_A 146 KGKAFII------GGG-ILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEMGDLI 218 (385)
T ss_dssp HSCEEEE------CCS-HHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGCHHHH
T ss_pred CCeEEEE------CCC-HHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEcCeEE
Confidence 4678877 332 36789999999999999977533210 0 2234667899998754333333345
Q ss_pred CcCEEEEcc
Q 005746 311 KADLVIAGS 319 (679)
Q Consensus 311 kaDLVia~S 319 (679)
.+|+|+..+
T Consensus 219 ~~D~vv~a~ 227 (385)
T 3klj_A 219 RSSCVITAV 227 (385)
T ss_dssp HHSEEEECC
T ss_pred ecCeEEECc
Confidence 678887643
No 96
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=34.68 E-value=47 Score=33.21 Aligned_cols=53 Identities=15% Similarity=0.131 Sum_probs=40.8
Q ss_pred HHHHHHhCCCCCcEEECCCchhHHHHHH--HcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEe
Q 005746 595 LEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPKNIS 655 (679)
Q Consensus 595 L~~L~~~lnLs~~V~ftG~~tdVaslys--AADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S 655 (679)
.+.+++.++++. ..+++.+++. ..|++++.+. ...---.+++|+..|++|++-
T Consensus 42 a~~~a~~~~~~~------~~~~~~~ll~~~~vD~V~i~tp--~~~H~~~~~~al~~GkhVl~E 96 (334)
T 3ohs_X 42 AKEFAQKHDIPK------AYGSYEELAKDPNVEVAYVGTQ--HPQHKAAVMLCLAAGKAVLCE 96 (334)
T ss_dssp HHHHHHHHTCSC------EESSHHHHHHCTTCCEEEECCC--GGGHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCCc------ccCCHHHHhcCCCCCEEEECCC--cHHHHHHHHHHHhcCCEEEEE
Confidence 455666667642 2478888988 5999999985 666677899999999999874
No 97
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=34.37 E-value=46 Score=31.90 Aligned_cols=35 Identities=11% Similarity=-0.022 Sum_probs=23.0
Q ss_pred cCCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEE
Q 005746 239 FVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAV 278 (679)
Q Consensus 239 ~~~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaV 278 (679)
-|...|+++|+ ||+.-.-..+|.+|++.|++|.++
T Consensus 22 ~m~~~k~vlIT-----Gas~gIG~a~a~~l~~~G~~V~~~ 56 (272)
T 4e3z_A 22 SMSDTPVVLVT-----GGSRGIGAAVCRLAARQGWRVGVN 56 (272)
T ss_dssp --CCSCEEEET-----TTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred hccCCCEEEEE-----CCCchHHHHHHHHHHHCCCEEEEE
Confidence 34556778873 222234568999999999998654
No 98
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=34.05 E-value=38 Score=36.11 Aligned_cols=64 Identities=22% Similarity=0.272 Sum_probs=42.9
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcchhhhcCcCEEEEcchh
Q 005746 252 LSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAV 321 (679)
Q Consensus 252 LsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~sfk~~~kaDLVia~Sav 321 (679)
.+.+|.-.+ -+|..|.+.|++|++.-.. ....+++|...|+++........+ ..+|+|+...++
T Consensus 18 i~I~G~G~s--glA~~l~~~G~~V~g~D~~-~~~~~~~L~~~gi~~~~g~~~~~~---~~~d~vV~spgi 81 (469)
T 1j6u_A 18 VGIGGIGMS--AVALHEFSNGNDVYGSNIE-ETERTAYLRKLGIPIFVPHSADNW---YDPDLVIKTPAV 81 (469)
T ss_dssp ETTTSHHHH--HHHHHHHHTTCEEEEECSS-CCHHHHHHHHTTCCEESSCCTTSC---CCCSEEEECTTC
T ss_pred EEEcccCHH--HHHHHHHhCCCEEEEEcCC-CCHHHHHHHhCCCEEECCCCHHHC---CCCCEEEECCCc
Confidence 467888655 4499999999998865322 223456788899999863211112 368999998765
No 99
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=33.88 E-value=38 Score=28.79 Aligned_cols=37 Identities=22% Similarity=0.149 Sum_probs=27.3
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEE
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAV 278 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaV 278 (679)
++..|+++|..+.+.....+..++..|.+.|+.|.++
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~ 39 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERP 39 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECC
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEe
Confidence 4567888999875544335668999999999987654
No 100
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=33.19 E-value=1.7e+02 Score=26.28 Aligned_cols=73 Identities=19% Similarity=0.239 Sum_probs=41.3
Q ss_pred CeEEEEeCCCCCCCHHHHHHH-HHHHHHH-CCCeEEEEEeCCCCCChhHH-hcCCeEEEEcCCCcchhhhcCcCEEEEcc
Q 005746 243 RKFILIFHELSMTGAPLSMME-LATELLS-CGATVSAVVLSKRGGLMPEL-ARRKIKVLEDRGEPSFKTSMKADLVIAGS 319 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmme-LAteL~s-~G~~VsaVvLs~~GgL~~EL-~rrgIkVl~~r~~~sfk~~~kaDLVia~S 319 (679)
+||++|..+ ++|.-..+.+ ++..|.+ .|++|.++-+... ..+.+ ...+... .............+|.|+.++
T Consensus 2 mkilii~~S--~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~--~~~~~~~~~~~~~-~~~~~~~~~~l~~aD~ii~gs 76 (198)
T 3b6i_A 2 AKVLVLYYS--MYGHIETMARAVAEGASKVDGAEVVVKRVPET--MPPQLFEKAGGKT-QTAPVATPQELADYDAIIFGT 76 (198)
T ss_dssp CEEEEEECC--SSSHHHHHHHHHHHHHHTSTTCEEEEEECCCC--SCHHHHHHTTCCC-CCSCBCCGGGGGGCSEEEEEE
T ss_pred CeEEEEEeC--CCcHHHHHHHHHHHHHhhcCCCEEEEEEcccc--Cchhhhhhccccc-ccCchhhHHHHHHCCEEEEEe
Confidence 478888877 5777665555 5666776 8999998877653 22222 1111100 000001133445789998776
Q ss_pred h
Q 005746 320 A 320 (679)
Q Consensus 320 a 320 (679)
.
T Consensus 77 P 77 (198)
T 3b6i_A 77 P 77 (198)
T ss_dssp E
T ss_pred C
Confidence 4
No 101
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=32.98 E-value=72 Score=30.80 Aligned_cols=73 Identities=18% Similarity=0.099 Sum_probs=41.0
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEc-CCCc-ch----h----hhcC
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLED-RGEP-SF----K----TSMK 311 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~-r~~~-sf----k----~~~k 311 (679)
..|.++|+ ||+--.-.++|..|++.|++|.++... ...+.+++...++.++.. -.+. +. . ...+
T Consensus 26 ~~k~vlVT-----Gas~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 26 SSAPILIT-----GASQRVGLHCALRLLEHGHRVIISYRT-EHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp -CCCEEES-----STTSHHHHHHHHHHHHTTCCEEEEESS-CCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEE-----CCCCHHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 34566663 222224558899999999998776533 233455565556666542 2221 11 1 1236
Q ss_pred cCEEEEcch
Q 005746 312 ADLVIAGSA 320 (679)
Q Consensus 312 aDLVia~Sa 320 (679)
+|+++.+..
T Consensus 100 iD~lv~nAg 108 (260)
T 3gem_A 100 LRAVVHNAS 108 (260)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 788887653
No 102
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=32.29 E-value=58 Score=32.68 Aligned_cols=54 Identities=13% Similarity=0.086 Sum_probs=39.8
Q ss_pred HHHHHHhCCCCCcEEECCCchhHHHHHH--HcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeC
Q 005746 595 LEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPKNISQ 656 (679)
Q Consensus 595 L~~L~~~lnLs~~V~ftG~~tdVaslys--AADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~ 656 (679)
.+.+++.++.+ ...++..+++. .+|++++.+. .....-.+++|+..|++|++-.
T Consensus 40 ~~~~~~~~~~~------~~~~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~~gk~v~~EK 95 (344)
T 3ezy_A 40 LREMKEKLGVE------KAYKDPHELIEDPNVDAVLVCSS--TNTHSELVIACAKAKKHVFCEK 95 (344)
T ss_dssp HHHHHHHHTCS------EEESSHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHhCCC------ceeCCHHHHhcCCCCCEEEEcCC--CcchHHHHHHHHhcCCeEEEEC
Confidence 34455555542 12478888988 7999999985 5666678899999999998643
No 103
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=31.77 E-value=88 Score=27.50 Aligned_cols=41 Identities=24% Similarity=0.267 Sum_probs=31.0
Q ss_pred CeEEEEeCCCCCC-CHHHHHHHHHHHHHHCCCeE-EEEEeCCCC
Q 005746 243 RKFILIFHELSMT-GAPLSMMELATELLSCGATV-SAVVLSKRG 284 (679)
Q Consensus 243 rKILlI~heLsmg-GAplsmmeLAteL~s~G~~V-saVvLs~~G 284 (679)
||+++|++.-..+ -.....+.+|..+.+.||+| .++ +..+|
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vf-f~~dG 43 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVF-FYHDG 43 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEE-ECGGG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEE-EechH
Confidence 5788888877664 34567899999999999999 655 44444
No 104
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=31.74 E-value=34 Score=33.27 Aligned_cols=37 Identities=11% Similarity=0.036 Sum_probs=21.4
Q ss_pred ccCCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 005746 238 RFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (679)
Q Consensus 238 ~~~~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVv 279 (679)
..|...|+++|+-. +--.-.++|..|++.|++|.++.
T Consensus 19 ~~m~~~k~~lVTGa-----s~GIG~aia~~la~~G~~V~~~~ 55 (279)
T 3sju_A 19 SHMSRPQTAFVTGV-----SSGIGLAVARTLAARGIAVYGCA 55 (279)
T ss_dssp ------CEEEEEST-----TSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCCEEEEeCC-----CCHHHHHHHHHHHHCCCEEEEEe
Confidence 33455677777432 22244578999999999987654
No 105
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=31.67 E-value=53 Score=32.44 Aligned_cols=52 Identities=15% Similarity=0.148 Sum_probs=39.0
Q ss_pred HHHHHHhCCCCCcEEECCCchhHHHHHH--HcCEEEEcCCCCCCCccHHHHHHHHcCCCEEE
Q 005746 595 LEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 595 L~~L~~~lnLs~~V~ftG~~tdVaslys--AADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
.+.+++.++.+ ...+++.+++. .+|++++.+. .....-++++|+..|++|++
T Consensus 38 ~~~~~~~~g~~------~~~~~~~~~l~~~~~D~V~i~tp--~~~h~~~~~~al~~Gk~v~~ 91 (332)
T 2glx_A 38 GAAYATENGIG------KSVTSVEELVGDPDVDAVYVSTT--NELHREQTLAAIRAGKHVLC 91 (332)
T ss_dssp HHHHHHHTTCS------CCBSCHHHHHTCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCC------cccCCHHHHhcCCCCCEEEEeCC--hhHhHHHHHHHHHCCCeEEE
Confidence 44556666653 13567888887 4999999985 56666788899999999987
No 106
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=31.67 E-value=45 Score=32.13 Aligned_cols=22 Identities=23% Similarity=0.123 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHCCCeEEEEE
Q 005746 258 PLSMMELATELLSCGATVSAVV 279 (679)
Q Consensus 258 plsmmeLAteL~s~G~~VsaVv 279 (679)
-..--.|+..|.+.||+|++++
T Consensus 10 GfIG~~L~~~L~~~G~~V~~l~ 31 (298)
T 4b4o_A 10 GFIGTALTQLLNARGHEVTLVS 31 (298)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEE
Confidence 3455678999999999998765
No 107
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=31.58 E-value=39 Score=33.41 Aligned_cols=61 Identities=11% Similarity=0.067 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCC-----ChhHHhcCCeEEEEcCC-Cc-chhh-hc--CcCEEEEcch
Q 005746 260 SMMELATELLSCGATVSAVVLSKRGG-----LMPELARRKIKVLEDRG-EP-SFKT-SM--KADLVIAGSA 320 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVvLs~~Gg-----L~~EL~rrgIkVl~~r~-~~-sfk~-~~--kaDLVia~Sa 320 (679)
.-..|+.+|++.|++|.+++-+.... ...++...++.++.... +. ++.. .. .+|+||...+
T Consensus 22 iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~ 92 (346)
T 3i6i_A 22 IGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVG 92 (346)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEECCc
Confidence 44578889999999998776432111 12245567888886432 21 2222 12 6899876543
No 108
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=31.49 E-value=78 Score=27.69 Aligned_cols=67 Identities=13% Similarity=0.249 Sum_probs=40.7
Q ss_pred cccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCc
Q 005746 569 KQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETF 638 (679)
Q Consensus 569 ~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgF 638 (679)
+..+..++++ ..|+|..-...+...++....+.|+.-.|.-.+. .++...+..+|+++...+ +.+.|
T Consensus 17 ~~~~~kkIlv-vC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~-~~~~~~~~~~DlIist~~-l~~~~ 83 (113)
T 1tvm_A 17 FQGSKRKIIV-ACGGAVATSTMAAEEIKELCQSHNIPVELIQCRV-NEIETYMDGVHLICTTAR-VDRSF 83 (113)
T ss_dssp CSCSSEEEEE-ESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECT-TTTTTSTTSCSEEEESSC-CCCCS
T ss_pred hcccccEEEE-ECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecH-HHHhhccCCCCEEEECCc-ccccc
Confidence 3334445544 3566554444467778888888888744544443 334444568999999887 45444
No 109
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=31.11 E-value=53 Score=32.64 Aligned_cols=52 Identities=19% Similarity=0.172 Sum_probs=38.0
Q ss_pred HHHHHHhCCCCCcEEECCCchhHHHHHH--HcCEEEEcCCCCCCCccHHHHHHHHcCCCEEE
Q 005746 595 LEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 595 L~~L~~~lnLs~~V~ftG~~tdVaslys--AADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
++.+++.+|.+. ..+++.+++. .+|++++.+. ....--.+++|+..|++|++
T Consensus 47 ~~~~a~~~g~~~------~~~~~~~~l~~~~~D~V~i~tp--~~~h~~~~~~al~~G~~v~~ 100 (346)
T 3cea_A 47 LEWAKNELGVET------TYTNYKDMIDTENIDAIFIVAP--TPFHPEMTIYAMNAGLNVFC 100 (346)
T ss_dssp HHHHHHTTCCSE------EESCHHHHHTTSCCSEEEECSC--GGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCCc------ccCCHHHHhcCCCCCEEEEeCC--hHhHHHHHHHHHHCCCEEEE
Confidence 445666666531 1357788887 5899999985 56666678899999999987
No 110
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=30.88 E-value=66 Score=32.68 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=40.6
Q ss_pred HHHHHHhCCCCCcEEECCCchhHHHHHHH--cCEEEEcCCCCCCCccHHHHHHHHcCCCEEE
Q 005746 595 LEFLSQHSNLSKAMLWTPATTRVASLYSA--ADVYVINSQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 595 L~~L~~~lnLs~~V~ftG~~tdVaslysA--ADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
.+.+++.++++. ..+++.+++.. .|++++.+. ...-.-.+++||..|++|++
T Consensus 59 a~~~a~~~~~~~------~~~~~~~ll~~~~iD~V~i~tp--~~~h~~~~~~al~~Gk~V~~ 112 (383)
T 3oqb_A 59 VEALAKRFNIAR------WTTDLDAALADKNDTMFFDAAT--TQARPGLLTQAINAGKHVYC 112 (383)
T ss_dssp HHHHHHHTTCCC------EESCHHHHHHCSSCCEEEECSC--SSSSHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHhCCCc------ccCCHHHHhcCCCCCEEEECCC--chHHHHHHHHHHHCCCeEEE
Confidence 455666777652 24788899986 899999885 67777789999999999985
No 111
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=30.57 E-value=26 Score=35.41 Aligned_cols=47 Identities=17% Similarity=0.037 Sum_probs=38.3
Q ss_pred chhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCcc
Q 005746 614 TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSRK 662 (679)
Q Consensus 614 ~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r~ 662 (679)
.+++..++..+||+|--+. .+..--.+..|+..|+|||+..+|.+.+
T Consensus 64 ~~dl~~ll~~~DVVIDfT~--p~a~~~~~~~al~~G~~vVigTTG~s~~ 110 (272)
T 4f3y_A 64 TDDIERVCAEADYLIDFTL--PEGTLVHLDAALRHDVKLVIGTTGFSEP 110 (272)
T ss_dssp BCCHHHHHHHCSEEEECSC--HHHHHHHHHHHHHHTCEEEECCCCCCHH
T ss_pred cCCHHHHhcCCCEEEEcCC--HHHHHHHHHHHHHcCCCEEEECCCCCHH
Confidence 5788899999999998885 6665566778999999999988886543
No 112
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=30.31 E-value=94 Score=28.42 Aligned_cols=43 Identities=19% Similarity=0.299 Sum_probs=33.8
Q ss_pred CCCeEEEEeCCCCCC-CHHHHHHHHHHHHHHCCCeE-EEEEeCCCC
Q 005746 241 WSRKFILIFHELSMT-GAPLSMMELATELLSCGATV-SAVVLSKRG 284 (679)
Q Consensus 241 ~~rKILlI~heLsmg-GAplsmmeLAteL~s~G~~V-saVvLs~~G 284 (679)
.++||+++++.-..| -.....+.+|..+...|++| .++ +..+|
T Consensus 11 ~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VF-f~~DG 55 (140)
T 2d1p_A 11 GSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVF-FYREG 55 (140)
T ss_dssp CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEE-ECGGG
T ss_pred CceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEE-EechH
Confidence 368999999998775 44567899999999999999 665 44444
No 113
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=30.14 E-value=1.3e+02 Score=29.39 Aligned_cols=48 Identities=13% Similarity=0.112 Sum_probs=37.1
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHH
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPEL 290 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL 290 (679)
+.|++.|+ .-+-.|.....++||..|++.|..|.+|-+...+.+...+
T Consensus 40 ~~~vI~v~-~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~~~~~~~l 87 (307)
T 3end_A 40 GAKVFAVY-GKGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDSTFTL 87 (307)
T ss_dssp CCEEEEEE-CSTTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCTTHHH
T ss_pred CceEEEEE-CCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCCCHHHHh
Confidence 45788777 5555677788899999999999999999888766554433
No 114
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=29.95 E-value=93 Score=31.06 Aligned_cols=42 Identities=21% Similarity=0.302 Sum_probs=31.8
Q ss_pred eEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCC
Q 005746 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG 285 (679)
Q Consensus 244 KILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~Gg 285 (679)
|+-+++..-+-.|--..|+.+|..|.+.|+.|.++.+...|.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~q~~ 47 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVETHGR 47 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCTTC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCCCCC
Confidence 444555555667888889999999999999998877665443
No 115
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=29.85 E-value=88 Score=32.85 Aligned_cols=70 Identities=14% Similarity=0.162 Sum_probs=40.8
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcchhhhcCcCEEEEcchh
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAV 321 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~sfk~~~kaDLVia~Sav 321 (679)
.+||++| +.|| +-|..|..|.++||+|++.-.........+|. .|+++........ ....+|+|+..+.+
T Consensus 5 ~~~v~vi----G~G~---~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~--~~~~~d~vV~s~gi 74 (439)
T 2x5o_A 5 GKNVVII----GLGL---TGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDE--WLMAADLIVASPGI 74 (439)
T ss_dssp TCCEEEE----CCHH---HHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHH--HHHTCSEEEECTTS
T ss_pred CCEEEEE----eecH---HHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHH--HhccCCEEEeCCCC
Confidence 4677665 3333 34455788999999998654322222234577 8998875432211 11268898887643
No 116
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=29.84 E-value=65 Score=29.08 Aligned_cols=39 Identities=15% Similarity=0.207 Sum_probs=29.4
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeC
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLS 281 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs 281 (679)
..+|+++|..+.+.....+..++..|.+.|+.|.++-+.
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 358899999775543456778999999999998766443
No 117
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=29.81 E-value=51 Score=33.23 Aligned_cols=85 Identities=12% Similarity=0.184 Sum_probs=51.9
Q ss_pred cCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchhHHHHHH--HcCEEEEc
Q 005746 553 FGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVIN 630 (679)
Q Consensus 553 ~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~tdVaslys--AADV~Vlp 630 (679)
+|.|.--+..+..+....+++.++ +.+... .+..+.+++.+|+ ...++..+++. .+|++++.
T Consensus 19 iG~G~~g~~~~~~l~~~~~~~~lv--av~d~~-------~~~~~~~~~~~~~-------~~~~~~~~ll~~~~~D~V~i~ 82 (354)
T 3q2i_A 19 VGCGRIANNHFGALEKHADRAELI--DVCDID-------PAALKAAVERTGA-------RGHASLTDMLAQTDADIVILT 82 (354)
T ss_dssp ECCSTTHHHHHHHHHHTTTTEEEE--EEECSS-------HHHHHHHHHHHCC-------EEESCHHHHHHHCCCSEEEEC
T ss_pred EcCcHHHHHHHHHHHhCCCCeEEE--EEEcCC-------HHHHHHHHHHcCC-------ceeCCHHHHhcCCCCCEEEEC
Confidence 444444444455554443555444 233331 2233445555553 23467888887 68999998
Q ss_pred CCCCCCCccHHHHHHHHcCCCEEEe
Q 005746 631 SQGLGETFGRVTIEAMAFGVPKNIS 655 (679)
Q Consensus 631 Sq~~~EgFGrV~IEAMA~GlPVV~S 655 (679)
+. ....--++++|+..|++|++-
T Consensus 83 tp--~~~h~~~~~~al~~gk~v~~E 105 (354)
T 3q2i_A 83 TP--SGLHPTQSIECSEAGFHVMTE 105 (354)
T ss_dssp SC--GGGHHHHHHHHHHTTCEEEEC
T ss_pred CC--cHHHHHHHHHHHHCCCCEEEe
Confidence 85 566667889999999999873
No 118
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=29.70 E-value=61 Score=31.56 Aligned_cols=73 Identities=18% Similarity=0.101 Sum_probs=38.4
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCC--CChhHHhcCCeEEEEcCCCcc----hh--------
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG--GLMPELARRKIKVLEDRGEPS----FK-------- 307 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~G--gL~~EL~rrgIkVl~~r~~~s----fk-------- 307 (679)
..|+++|+ ||+--.-..+|..|++.|++|.++..+... .+..++...+.++.....+.+ ..
T Consensus 3 ~~k~~lVT-----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 77 (264)
T 3tfo_A 3 MDKVILIT-----GASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVD 77 (264)
T ss_dssp TTCEEEES-----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEe-----CCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 44667773 222224458899999999998765422110 123445555545443222211 11
Q ss_pred hhcCcCEEEEcc
Q 005746 308 TSMKADLVIAGS 319 (679)
Q Consensus 308 ~~~kaDLVia~S 319 (679)
.....|+++.+.
T Consensus 78 ~~g~iD~lVnnA 89 (264)
T 3tfo_A 78 TWGRIDVLVNNA 89 (264)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 123688888764
No 119
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=29.31 E-value=48 Score=28.87 Aligned_cols=50 Identities=12% Similarity=0.078 Sum_probs=34.4
Q ss_pred eCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchhHHHHHHHcCEEEEcCC
Q 005746 581 VGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQ 632 (679)
Q Consensus 581 VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~tdVaslysAADV~VlpSq 632 (679)
.|.|..-. .+-+-++...+..|++-.|.-.+ ..++.+....+|++++..|
T Consensus 10 Cg~G~sTS-~l~~k~~~~~~~~gi~~~i~a~~-~~~~~~~~~~~Dvil~~pq 59 (106)
T 1e2b_A 10 SSAGMSTS-LLVSKMRAQAEKYEVPVIIEAFP-ETLAGEKGQNADVVLLGPQ 59 (106)
T ss_dssp CSSSTTTH-HHHHHHHHHHHHSCCSEEEEEEC-SSSTTHHHHHCSEEEECTT
T ss_pred CCCchhHH-HHHHHHHHHHHHCCCCeEEEEec-HHHHHhhccCCCEEEEccc
Confidence 45554444 45556777778889975554444 3456667889999999998
No 120
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=29.16 E-value=79 Score=29.95 Aligned_cols=20 Identities=20% Similarity=0.135 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHCCCeEEEEE
Q 005746 260 SMMELATELLSCGATVSAVV 279 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVv 279 (679)
.-..+|..|++.|++|.++.
T Consensus 16 iG~~ia~~l~~~G~~V~~~~ 35 (255)
T 2q2v_A 16 IGLGIAQVLARAGANIVLNG 35 (255)
T ss_dssp HHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 44588999999999987653
No 121
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=29.13 E-value=1.7e+02 Score=28.00 Aligned_cols=58 Identities=19% Similarity=0.129 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEE-cCCCcchhhhcCcCEEEEcc
Q 005746 260 SMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLE-DRGEPSFKTSMKADLVIAGS 319 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~-~r~~~sfk~~~kaDLVia~S 319 (679)
.-..|+..|++.|++|.++.-. ..-..++...+++++. |-.+..+....+.|+|+-..
T Consensus 12 iG~~l~~~L~~~g~~V~~~~r~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~d~vih~A 70 (312)
T 3ko8_A 12 IGSHLVDKLVELGYEVVVVDNL--SSGRREFVNPSAELHVRDLKDYSWGAGIKGDVVFHFA 70 (312)
T ss_dssp HHHHHHHHHHHTTCEEEEECCC--SSCCGGGSCTTSEEECCCTTSTTTTTTCCCSEEEECC
T ss_pred HHHHHHHHHHhCCCEEEEEeCC--CCCchhhcCCCceEEECccccHHHHhhcCCCEEEECC
Confidence 4557888999999998876432 2222233345666654 22222233333348887543
No 122
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=28.88 E-value=67 Score=33.51 Aligned_cols=55 Identities=9% Similarity=0.005 Sum_probs=42.4
Q ss_pred HHHHHHHhCCCCCcEEECCCchhHHHHHHH-------cCEEEEcCCCCCCCccHHHHHHHHcCCCEEE
Q 005746 594 ILEFLSQHSNLSKAMLWTPATTRVASLYSA-------ADVYVINSQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 594 ~L~~L~~~lnLs~~V~ftG~~tdVaslysA-------ADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
..+.+++.+|++.. ...+++.+++.. .|++++.+. ...-.-.+++|+..|++|++
T Consensus 78 ~a~~~a~~~g~~~~----~~~~~~~~ll~~~~~~~~~vD~V~I~tp--~~~H~~~~~~al~aGkhVl~ 139 (417)
T 3v5n_A 78 KAEASGRELGLDPS----RVYSDFKEMAIREAKLKNGIEAVAIVTP--NHVHYAAAKEFLKRGIHVIC 139 (417)
T ss_dssp HHHHHHHHHTCCGG----GBCSCHHHHHHHHHHCTTCCSEEEECSC--TTSHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHcCCCcc----cccCCHHHHHhcccccCCCCcEEEECCC--cHHHHHHHHHHHhCCCeEEE
Confidence 34556666776531 235788999987 899999996 67777789999999999986
No 123
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=28.72 E-value=80 Score=31.88 Aligned_cols=56 Identities=13% Similarity=0.053 Sum_probs=40.9
Q ss_pred HHHHHHhCCCCCcEEECCCchhHHHHHH--HcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEe
Q 005746 595 LEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPKNIS 655 (679)
Q Consensus 595 L~~L~~~lnLs~~V~ftG~~tdVaslys--AADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S 655 (679)
.+.+++.++++..+. ..+++.+++. .+|++++.+. .....-.+++|+..|++|++-
T Consensus 44 ~~~~a~~~~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~aGk~V~~E 101 (362)
T 1ydw_A 44 AKAFATANNYPESTK---IHGSYESLLEDPEIDALYVPLP--TSLHVEWAIKAAEKGKHILLE 101 (362)
T ss_dssp HHHHHHHTTCCTTCE---EESSHHHHHHCTTCCEEEECCC--GGGHHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHhCCCCCCe---eeCCHHHHhcCCCCCEEEEcCC--hHHHHHHHHHHHHCCCeEEEe
Confidence 455666777642222 1357888887 5899999995 666677889999999999973
No 124
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=28.70 E-value=88 Score=33.20 Aligned_cols=69 Identities=25% Similarity=0.342 Sum_probs=43.7
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcchhhhcCcCEEEEcchh
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAV 321 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~sfk~~~kaDLVia~Sav 321 (679)
++|++ ++.||. -|..+|..|.+.|++|++.-.. .....++|...|+++........ ...+|+|+...++
T Consensus 19 ~~i~v----iG~G~s--G~s~~A~~l~~~G~~V~~~D~~-~~~~~~~l~~~gi~~~~g~~~~~---~~~a~~vv~s~~i 87 (475)
T 1p3d_A 19 QQIHF----IGIGGA--GMSGIAEILLNEGYQISGSDIA-DGVVTQRLAQAGAKIYIGHAEEH---IEGASVVVVSSAI 87 (475)
T ss_dssp CEEEE----ETTTST--THHHHHHHHHHHTCEEEEEESC-CSHHHHHHHHTTCEEEESCCGGG---GTTCSEEEECTTS
T ss_pred CEEEE----EeecHH--HHHHHHHHHHhCCCEEEEECCC-CCHHHHHHHhCCCEEECCCCHHH---cCCCCEEEECCCC
Confidence 45544 455654 2334788888999999875432 23344678889999975432211 2368999987654
No 125
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=28.70 E-value=1.3e+02 Score=28.21 Aligned_cols=65 Identities=18% Similarity=0.253 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHhCCCCCcEEECCCchh------H----HHHHHHcCEEEEcC---CCCCCCccHHHHH---HHHcCCC
Q 005746 588 VPYVKEILEFLSQHSNLSKAMLWTPATTR------V----ASLYSAADVYVINS---QGLGETFGRVTIE---AMAFGVP 651 (679)
Q Consensus 588 ~~y~k~~L~~L~~~lnLs~~V~ftG~~td------V----aslysAADV~VlpS---q~~~EgFGrV~IE---AMA~GlP 651 (679)
..+.+++.+.+ +..|+ ..|.|.... + -..+..||++|..= +| .+.=.-+..| |.|.|+|
T Consensus 26 ~~~~~~l~~~l-~~~G~---~v~~P~~~~~~~~~~i~~~d~~~i~~aD~vVA~ldpf~g-~~~D~GTafEiGyA~AlgKP 100 (161)
T 2f62_A 26 ASYYNKVRELL-KKENV---MPLIPTDNEATEALDIRQKNIQMIKDCDAVIADLSPFRG-HEPDCGTAFEVGCAAALNKM 100 (161)
T ss_dssp HHHHHHHHHHH-HTTTC---EEECTTTTCCSSHHHHHHHHHHHHHHCSEEEEECCCCSS-SSCCHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHH-HHCCC---EEECCCccCcchHHHHHHHHHHHHHhCCEEEEEecCCCC-CCCCCcHHHHHHHHHHCCCE
Confidence 44555544444 44565 345565321 1 47889999998772 22 2333335555 8899999
Q ss_pred EEEeCC
Q 005746 652 KNISQI 657 (679)
Q Consensus 652 VV~S~~ 657 (679)
||+-..
T Consensus 101 Vi~l~~ 106 (161)
T 2f62_A 101 VLTFTS 106 (161)
T ss_dssp EEEECS
T ss_pred EEEEEc
Confidence 999543
No 126
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=28.62 E-value=1.2e+02 Score=28.93 Aligned_cols=33 Identities=18% Similarity=0.092 Sum_probs=21.5
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVv 279 (679)
..|.++|+-.. +| .-.++|.+|++.|++|.++.
T Consensus 33 ~~k~vlITGas--gg---IG~~la~~L~~~G~~V~~~~ 65 (279)
T 3ctm_A 33 KGKVASVTGSS--GG---IGWAVAEAYAQAGADVAIWY 65 (279)
T ss_dssp TTCEEEETTTT--SS---HHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEECCC--cH---HHHHHHHHHHHCCCEEEEEe
Confidence 44666774222 22 33478889999999987664
No 127
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=28.51 E-value=64 Score=32.07 Aligned_cols=51 Identities=12% Similarity=0.067 Sum_probs=39.9
Q ss_pred HHHHHHhCCCCCcEEECCCchhHHHHHH--HcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEe
Q 005746 595 LEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPKNIS 655 (679)
Q Consensus 595 L~~L~~~lnLs~~V~ftG~~tdVaslys--AADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S 655 (679)
.+.+++.+|++ .++..+++. .+|++++.+. .....-++++|+..|++|++-
T Consensus 41 ~~~~~~~~~~~--------~~~~~~~l~~~~~D~V~i~tp--~~~h~~~~~~al~~gk~v~~E 93 (331)
T 4hkt_A 41 AEAIAGAYGCE--------VRTIDAIEAAADIDAVVICTP--TDTHADLIERFARAGKAIFCE 93 (331)
T ss_dssp HHHHHHHTTCE--------ECCHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHhCCC--------cCCHHHHhcCCCCCEEEEeCC--chhHHHHHHHHHHcCCcEEEe
Confidence 45566666653 467888888 7999999885 666777889999999999874
No 128
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=28.30 E-value=62 Score=30.61 Aligned_cols=32 Identities=19% Similarity=0.049 Sum_probs=21.5
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVv 279 (679)
.|.++|+ ||+--.-..+|..|++.|++|.++.
T Consensus 4 ~k~~lVT-----Gas~gIG~~ia~~l~~~G~~V~~~~ 35 (246)
T 3osu_A 4 TKSALVT-----GASRGIGRSIALQLAEEGYNVAVNY 35 (246)
T ss_dssp SCEEEET-----TCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEE-----CCCChHHHHHHHHHHHCCCEEEEEe
Confidence 4566662 2222345588999999999987654
No 129
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=28.23 E-value=2.5e+02 Score=27.10 Aligned_cols=58 Identities=12% Similarity=0.019 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcC-CCc-chhh-hcCcCEEEEcc
Q 005746 260 SMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDR-GEP-SFKT-SMKADLVIAGS 319 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r-~~~-sfk~-~~kaDLVia~S 319 (679)
.-..|+..|++.|++|.+++-. ..-.+++...++.++... .+. ++.. ...+|+|+...
T Consensus 25 iG~~l~~~L~~~g~~V~~~~r~--~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a 85 (342)
T 2x4g_A 25 LGHHAARAIRAAGHDLVLIHRP--SSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSA 85 (342)
T ss_dssp HHHHHHHHHHHTTCEEEEEECT--TSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-
T ss_pred HHHHHHHHHHHCCCEEEEEecC--hHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 4557888999999999877643 222344544577776532 221 2222 23689887654
No 130
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=28.12 E-value=1.3e+02 Score=29.14 Aligned_cols=67 Identities=12% Similarity=0.058 Sum_probs=47.0
Q ss_pred ChHHHHHHHHHHHHhCCCCCcEEECCCchhHHHHHHHcCEEEEcCCCCCCCc-----------cHHHHHHHHcCCCEEEe
Q 005746 587 KVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSAADVYVINSQGLGETF-----------GRVTIEAMAFGVPKNIS 655 (679)
Q Consensus 587 k~~y~k~~L~~L~~~lnLs~~V~ftG~~tdVaslysAADV~VlpSq~~~EgF-----------GrV~IEAMA~GlPVV~S 655 (679)
...|.....+.+. ++|. .+..+-..++..+.+..||.+++|- +|++ --++-|+.+.|+|++.+
T Consensus 46 ~~~~~~~~~~al~-~lG~--~~~~v~~~~d~~~~l~~ad~I~lpG---G~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~ 119 (229)
T 1fy2_A 46 WDEYTDKTAEVLA-PLGV--NVTGIHRVADPLAAIEKAEIIIVGG---GNTFQLLKESRERGLLAPMADRVKRGALYIGW 119 (229)
T ss_dssp HHHHHHHHHHHHG-GGTC--EEEETTSSSCHHHHHHHCSEEEECC---SCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHH-HCCC--EEEEEeccccHHHHHhcCCEEEECC---CcHHHHHHHHHHCChHHHHHHHHHcCCEEEEE
Confidence 3467776666554 4665 4555544456768889999999998 5543 33577788899999998
Q ss_pred CCCC
Q 005746 656 QIEL 659 (679)
Q Consensus 656 ~~g~ 659 (679)
-+|.
T Consensus 120 sAG~ 123 (229)
T 1fy2_A 120 SAGA 123 (229)
T ss_dssp THHH
T ss_pred CHHH
Confidence 8773
No 131
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=27.88 E-value=71 Score=32.89 Aligned_cols=55 Identities=11% Similarity=0.078 Sum_probs=42.8
Q ss_pred HHHHHHHhCCCCCcEEECCCchhHHHHHHH-------cCEEEEcCCCCCCCccHHHHHHHHcCCCEEE
Q 005746 594 ILEFLSQHSNLSKAMLWTPATTRVASLYSA-------ADVYVINSQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 594 ~L~~L~~~lnLs~~V~ftG~~tdVaslysA-------ADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
..+.+++.+|++.. ...+++.+++.. .|++++.+. ...-.-.+++|+.+|++|++
T Consensus 53 ~a~~~a~~~g~~~~----~~~~~~~~ll~~~~~~~~~vD~V~i~tp--~~~H~~~~~~al~aGkhVl~ 114 (398)
T 3dty_A 53 RGSAFGEQLGVDSE----RCYADYLSMFEQEARRADGIQAVSIATP--NGTHYSITKAALEAGLHVVC 114 (398)
T ss_dssp HHHHHHHHTTCCGG----GBCSSHHHHHHHHTTCTTCCSEEEEESC--GGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhCCCcc----eeeCCHHHHHhcccccCCCCCEEEECCC--cHHHHHHHHHHHHCCCeEEE
Confidence 34566777887531 235788999987 899999885 66777789999999999987
No 132
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=27.82 E-value=1e+02 Score=33.81 Aligned_cols=80 Identities=21% Similarity=0.224 Sum_probs=51.0
Q ss_pred ccccccCCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCC-Chh---H-Hhc----CCeEEEEcCCCc
Q 005746 234 GDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG-LMP---E-LAR----RKIKVLEDRGEP 304 (679)
Q Consensus 234 ~~f~~~~~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~Gg-L~~---E-L~r----rgIkVl~~r~~~ 304 (679)
.|+......+|+++. + -+..++.|++.|.++|.+|..+....... +.+ + +.. .+..|+......
T Consensus 352 ~d~~~~l~Gkrv~i~------g-d~~~~~~la~~L~ElGm~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~~v~~~~d~~ 424 (519)
T 1qgu_B 352 LDSHTWLHGKKFGLY------G-DPDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVFINCDLW 424 (519)
T ss_dssp HHHHHHHTTCEEEEE------S-CHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEEESCCHH
T ss_pred HHHHHHcCCCEEEEE------C-CchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCCEEEECCCHH
Confidence 344455577888876 2 36788999999999999998776554332 111 1 222 246777754322
Q ss_pred ch---hhhcCcCEEEEcch
Q 005746 305 SF---KTSMKADLVIAGSA 320 (679)
Q Consensus 305 sf---k~~~kaDLVia~Sa 320 (679)
.+ ....++||+|.++.
T Consensus 425 ~l~~~i~~~~pDLiig~~~ 443 (519)
T 1qgu_B 425 HFRSLMFTRQPDFMIGNSY 443 (519)
T ss_dssp HHHHHHHHHCCSEEEECGG
T ss_pred HHHHHHhhcCCCEEEECcc
Confidence 22 23457999999874
No 133
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=27.76 E-value=63 Score=28.71 Aligned_cols=36 Identities=19% Similarity=0.252 Sum_probs=27.6
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVL 280 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvL 280 (679)
..+|+++|... |....+..++..|.++|+.|.++-+
T Consensus 32 ~p~vv~~HG~~--g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIF--GVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTT--CSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcC--ccCHHHHHHHHHHHHCCcEEEEecc
Confidence 35889999854 4445778999999999999876644
No 134
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=27.71 E-value=89 Score=33.39 Aligned_cols=69 Identities=20% Similarity=0.254 Sum_probs=43.2
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcchhhhcCcCEEEEcchh
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSAV 321 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~sfk~~~kaDLVia~Sav 321 (679)
+||++ ++.||. -|..+|..|.+.|++|++.-.. .....++|...|+++....... ....+|+|+...++
T Consensus 20 ~~v~v----iGiG~s--G~s~~A~~l~~~G~~V~~~D~~-~~~~~~~l~~~gi~~~~g~~~~---~~~~a~~vv~s~~i 88 (491)
T 2f00_A 20 RHIHF----VGIGGA--GMGGIAEVLANEGYQISGSDLA-PNPVTQQLMNLGATIYFNHRPE---NVRDASVVVVSSAI 88 (491)
T ss_dssp CEEEE----ETTTST--THHHHHHHHHHTTCEEEEECSS-CCHHHHHHHHTTCEEESSCCGG---GGTTCSEEEECTTC
T ss_pred CEEEE----EEcCHH--HHHHHHHHHHhCCCeEEEECCC-CCHHHHHHHHCCCEEECCCCHH---HcCCCCEEEECCCC
Confidence 45544 456664 3344788899999999865332 2234457888999986432211 12368999987654
No 135
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=27.51 E-value=95 Score=31.21 Aligned_cols=85 Identities=11% Similarity=0.157 Sum_probs=52.7
Q ss_pred cCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchhHHHHH--HHcCEEEEc
Q 005746 553 FGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLY--SAADVYVIN 630 (679)
Q Consensus 553 ~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~tdVasly--sAADV~Vlp 630 (679)
+|.|.--+..++.+. ..+++.++ +.+... .+..+.+++.+|++ ..+++.+++ ...|++++.
T Consensus 11 iG~G~~g~~~~~~l~-~~~~~~lv--av~d~~-------~~~~~~~~~~~g~~-------~~~~~~~~l~~~~~D~V~i~ 73 (354)
T 3db2_A 11 IGLGRWAYVMADAYT-KSEKLKLV--TCYSRT-------EDKREKFGKRYNCA-------GDATMEALLAREDVEMVIIT 73 (354)
T ss_dssp ECCSHHHHHHHHHHT-TCSSEEEE--EEECSS-------HHHHHHHHHHHTCC-------CCSSHHHHHHCSSCCEEEEC
T ss_pred EccCHHHHHHHHHHH-hCCCcEEE--EEECCC-------HHHHHHHHHHcCCC-------CcCCHHHHhcCCCCCEEEEe
Confidence 344443344444444 34455443 333331 22344455556653 257888898 458999999
Q ss_pred CCCCCCCccHHHHHHHHcCCCEEEeC
Q 005746 631 SQGLGETFGRVTIEAMAFGVPKNISQ 656 (679)
Q Consensus 631 Sq~~~EgFGrV~IEAMA~GlPVV~S~ 656 (679)
+. ...---++++|+..|++|++-.
T Consensus 74 tp--~~~h~~~~~~al~~gk~vl~EK 97 (354)
T 3db2_A 74 VP--NDKHAEVIEQCARSGKHIYVEK 97 (354)
T ss_dssp SC--TTSHHHHHHHHHHTTCEEEEES
T ss_pred CC--hHHHHHHHHHHHHcCCEEEEcc
Confidence 86 6666778899999999999743
No 136
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=27.44 E-value=84 Score=31.94 Aligned_cols=87 Identities=10% Similarity=0.074 Sum_probs=53.5
Q ss_pred cCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchhHHHHHH--HcCEEEEc
Q 005746 553 FGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVIN 630 (679)
Q Consensus 553 ~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~tdVaslys--AADV~Vlp 630 (679)
+|.|.--+..+..+....+++.++ +.+... + +..+.+++.+|+.. ...+++.+++. ..|++++.
T Consensus 29 IG~G~~g~~~~~~l~~~~~~~~lv--av~d~~--~-----~~~~~~a~~~g~~~-----~~~~~~~~ll~~~~~D~V~i~ 94 (357)
T 3ec7_A 29 VGIGMIGSDHLRRLANTVSGVEVV--AVCDIV--A-----GRAQAALDKYAIEA-----KDYNDYHDLINDKDVEVVIIT 94 (357)
T ss_dssp ECCSHHHHHHHHHHHHTCTTEEEE--EEECSS--T-----THHHHHHHHHTCCC-----EEESSHHHHHHCTTCCEEEEC
T ss_pred ECCcHHHHHHHHHHHhhCCCcEEE--EEEeCC--H-----HHHHHHHHHhCCCC-----eeeCCHHHHhcCCCCCEEEEc
Confidence 455554445555555445565444 333332 1 12334455555421 12467888887 48999999
Q ss_pred CCCCCCCccHHHHHHHHcCCCEEEe
Q 005746 631 SQGLGETFGRVTIEAMAFGVPKNIS 655 (679)
Q Consensus 631 Sq~~~EgFGrV~IEAMA~GlPVV~S 655 (679)
+. ...---.+++|+..|++|++=
T Consensus 95 tp--~~~h~~~~~~al~aGk~Vl~E 117 (357)
T 3ec7_A 95 AS--NEAHADVAVAALNANKYVFCE 117 (357)
T ss_dssp SC--GGGHHHHHHHHHHTTCEEEEE
T ss_pred CC--cHHHHHHHHHHHHCCCCEEee
Confidence 85 666777889999999999863
No 137
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=26.79 E-value=70 Score=29.94 Aligned_cols=54 Identities=15% Similarity=0.067 Sum_probs=30.5
Q ss_pred CCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCC---ChhHHhcCCeEEE
Q 005746 240 VWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG---LMPELARRKIKVL 298 (679)
Q Consensus 240 ~~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~Gg---L~~EL~rrgIkVl 298 (679)
|.+.|.++|+ ||+.-.-.++|..|++.|+.|.++.-..... +..++...+.++.
T Consensus 4 ~l~~k~vlIT-----Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (255)
T 3icc_A 4 MLKGKVALVT-----GASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF 60 (255)
T ss_dssp TTTTCEEEET-----TCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEE
T ss_pred ccCCCEEEEE-----CCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceE
Confidence 3455677772 2222245689999999999987654222222 2234445554443
No 138
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=26.78 E-value=1.6e+02 Score=29.40 Aligned_cols=67 Identities=22% Similarity=0.192 Sum_probs=39.6
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEE-cCCCc---------chhhhc-
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLE-DRGEP---------SFKTSM- 310 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~-~r~~~---------sfk~~~- 310 (679)
++||.+| -.|+ .-.-+|..|.+.|++|+++. + .. .+.+.+.|+.+.. ..+.. +.....
T Consensus 2 ~mkI~Ii-----GaGa--iG~~~a~~L~~~g~~V~~~~--r-~~-~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~ 70 (320)
T 3i83_A 2 SLNILVI-----GTGA--IGSFYGALLAKTGHCVSVVS--R-SD-YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELET 70 (320)
T ss_dssp -CEEEEE-----SCCH--HHHHHHHHHHHTTCEEEEEC--S-TT-HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSS
T ss_pred CCEEEEE-----CcCH--HHHHHHHHHHhCCCeEEEEe--C-Ch-HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCC
Confidence 4677777 2233 33357778889999998764 3 33 3777777877664 22211 111222
Q ss_pred CcCEEEEcc
Q 005746 311 KADLVIAGS 319 (679)
Q Consensus 311 kaDLVia~S 319 (679)
.+|+|+...
T Consensus 71 ~~DlVilav 79 (320)
T 3i83_A 71 KPDCTLLCI 79 (320)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEEec
Confidence 689998754
No 139
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=26.64 E-value=1.2e+02 Score=31.89 Aligned_cols=52 Identities=13% Similarity=0.117 Sum_probs=39.8
Q ss_pred hCCCCCcEEECCCchhHHHHHH--HcCEEEEcCCCCCCCccHHHHHHHHcCCCEEE
Q 005746 601 HSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 601 ~lnLs~~V~ftG~~tdVaslys--AADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
..|++..-.+.+..+++.++++ ..|++++.+. ...-.-.+++||.+|++|++
T Consensus 67 ~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp--~~~h~~~~~~al~aGkhV~~ 120 (444)
T 2ixa_A 67 KNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSP--WEWHHEHGVAAMKAGKIVGM 120 (444)
T ss_dssp HTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCC--GGGHHHHHHHHHHTTCEEEE
T ss_pred hcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCC--cHHHHHHHHHHHHCCCeEEE
Confidence 3566544455544558889987 5899999985 66667788999999999987
No 140
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=26.61 E-value=1.1e+02 Score=31.29 Aligned_cols=69 Identities=17% Similarity=0.148 Sum_probs=38.8
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCC--------ChhHHhcCCeEEEEcCC--Ccch---hhh
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG--------LMPELARRKIKVLEDRG--EPSF---KTS 309 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~Gg--------L~~EL~rrgIkVl~~r~--~~sf---k~~ 309 (679)
+||+++. .+-......+.|.+.||+|.+|+..++.. ..+...+.||+|+.... ...+ ...
T Consensus 1 mrivf~g-------t~~fa~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~~ 73 (305)
T 2bln_A 1 MKTVVFA-------YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQ 73 (305)
T ss_dssp CEEEEEE-------CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHH
T ss_pred CEEEEEE-------cCHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCcCCcHHHHHHHHh
Confidence 4666652 23333344456777799998776544322 33344567999885432 1111 234
Q ss_pred cCcCEEEEc
Q 005746 310 MKADLVIAG 318 (679)
Q Consensus 310 ~kaDLVia~ 318 (679)
.++|+++.-
T Consensus 74 ~~~Dliv~~ 82 (305)
T 2bln_A 74 LSPDVIFSF 82 (305)
T ss_dssp TCCSEEEEE
T ss_pred cCCCEEEEe
Confidence 689998753
No 141
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=26.60 E-value=75 Score=30.49 Aligned_cols=33 Identities=15% Similarity=-0.017 Sum_probs=21.7
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEE
Q 005746 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAV 278 (679)
Q Consensus 241 ~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaV 278 (679)
...|.++|+ ||+--.-..+|..|++.|++|.++
T Consensus 2 ~~~k~vlVT-----Gas~gIG~aia~~l~~~G~~vv~~ 34 (258)
T 3oid_A 2 EQNKCALVT-----GSSRGVGKAAAIRLAENGYNIVIN 34 (258)
T ss_dssp -CCCEEEES-----SCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEe-----cCCchHHHHHHHHHHHCCCEEEEE
Confidence 345677773 222224457899999999998764
No 142
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=26.43 E-value=58 Score=31.72 Aligned_cols=32 Identities=13% Similarity=0.097 Sum_probs=21.9
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVv 279 (679)
.|+++|+-. +.-.-..+|..|++.|++|.++.
T Consensus 29 ~k~~lVTGa-----s~GIG~aia~~la~~G~~V~~~~ 60 (280)
T 4da9_A 29 RPVAIVTGG-----RRGIGLGIARALAASGFDIAITG 60 (280)
T ss_dssp CCEEEEETT-----TSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEecC-----CCHHHHHHHHHHHHCCCeEEEEe
Confidence 467777432 22244588999999999987664
No 143
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=26.38 E-value=58 Score=32.33 Aligned_cols=53 Identities=11% Similarity=0.053 Sum_probs=39.3
Q ss_pred HHHHHHhCCCCCcEEECCCchhHHHHH-HHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEe
Q 005746 595 LEFLSQHSNLSKAMLWTPATTRVASLY-SAADVYVINSQGLGETFGRVTIEAMAFGVPKNIS 655 (679)
Q Consensus 595 L~~L~~~lnLs~~V~ftG~~tdVasly-sAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S 655 (679)
.+.+++.++.. ...+++.+++ ..+|++++.+. .....-.+++|+..|++|++-
T Consensus 39 ~~~~~~~~~~~------~~~~~~~~~l~~~~D~V~i~tp--~~~h~~~~~~al~~gk~V~~E 92 (325)
T 2ho3_A 39 AATFASRYQNI------QLFDQLEVFFKSSFDLVYIASP--NSLHFAQAKAALSAGKHVILE 92 (325)
T ss_dssp HHHHGGGSSSC------EEESCHHHHHTSSCSEEEECSC--GGGHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCC------eEeCCHHHHhCCCCCEEEEeCC--hHHHHHHHHHHHHcCCcEEEe
Confidence 44566666541 1245777888 67999999995 666777889999999999974
No 144
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=26.37 E-value=71 Score=30.73 Aligned_cols=76 Identities=13% Similarity=0.056 Sum_probs=36.6
Q ss_pred cccccccCCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcC-CCc-chhhh-
Q 005746 233 KGDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDR-GEP-SFKTS- 309 (679)
Q Consensus 233 k~~f~~~~~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r-~~~-sfk~~- 309 (679)
..+|..+...++||+. ||+-..-..|+.+|++.|++|.++.-.... +.+ ++.++... .+. ++...
T Consensus 3 ~~~~~~~~~~~~vlVT------GatG~iG~~l~~~L~~~G~~V~~~~r~~~~---~~l---~~~~~~~Dl~d~~~~~~~~ 70 (321)
T 2pk3_A 3 GSHHHHHHGSMRALIT------GVAGFVGKYLANHLTEQNVEVFGTSRNNEA---KLP---NVEMISLDIMDSQRVKKVI 70 (321)
T ss_dssp ----------CEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEESCTTC---CCT---TEEEEECCTTCHHHHHHHH
T ss_pred CcccccccCcceEEEE------CCCChHHHHHHHHHHHCCCEEEEEecCCcc---ccc---eeeEEECCCCCHHHHHHHH
Confidence 4566777666666544 222234557888999999999887644322 112 56665422 221 22222
Q ss_pred --cCcCEEEEcch
Q 005746 310 --MKADLVIAGSA 320 (679)
Q Consensus 310 --~kaDLVia~Sa 320 (679)
.++|+|+-..+
T Consensus 71 ~~~~~d~vih~A~ 83 (321)
T 2pk3_A 71 SDIKPDYIFHLAA 83 (321)
T ss_dssp HHHCCSEEEECCS
T ss_pred HhcCCCEEEEcCc
Confidence 24798876543
No 145
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=25.87 E-value=72 Score=27.92 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=28.0
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVL 280 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvL 280 (679)
+.+.|+++|.++.+.. ....++..|.+.|+.|.++-+
T Consensus 21 ~~~~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPN--DMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp SSEEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEECCC
T ss_pred CCceEEEeCCCCCCHH--HHHHHHHHHHHCCCEEEecCC
Confidence 3567888999765444 567899999999999876544
No 146
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=25.72 E-value=1.1e+02 Score=28.44 Aligned_cols=38 Identities=16% Similarity=-0.025 Sum_probs=29.5
Q ss_pred CeEEEEeCCCCC-CCHHHHHHHHHHHHHHCCCeEEEEEe
Q 005746 243 RKFILIFHELSM-TGAPLSMMELATELLSCGATVSAVVL 280 (679)
Q Consensus 243 rKILlI~heLsm-gGAplsmmeLAteL~s~G~~VsaVvL 280 (679)
..+|+++|..+. +|.......++..|.+.|+.|.++-.
T Consensus 50 ~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 88 (283)
T 3bjr_A 50 LPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEY 88 (283)
T ss_dssp EEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEec
Confidence 468899999763 55666678899999999999876653
No 147
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=25.51 E-value=59 Score=32.36 Aligned_cols=54 Identities=15% Similarity=0.177 Sum_probs=41.4
Q ss_pred HHHHHHHHhCCCCCcEEECCCchhHHHHHHH--cCEEEEcCCCCCCCccHHHHHHHHcCCCEEE
Q 005746 593 EILEFLSQHSNLSKAMLWTPATTRVASLYSA--ADVYVINSQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 593 ~~L~~L~~~lnLs~~V~ftG~~tdVaslysA--ADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
+..+.+++++|++. ..++..++++. .|++++.+. ...-.-.+++||.+|++|++
T Consensus 49 ~~a~~~a~~~g~~~------~~~d~~~ll~~~~iDaV~I~tP--~~~H~~~~~~al~aGkhVl~ 104 (390)
T 4h3v_A 49 EAVRAAAGKLGWST------TETDWRTLLERDDVQLVDVCTP--GDSHAEIAIAALEAGKHVLC 104 (390)
T ss_dssp HHHHHHHHHHTCSE------EESCHHHHTTCTTCSEEEECSC--GGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCc------ccCCHHHHhcCCCCCEEEEeCC--hHHHHHHHHHHHHcCCCcee
Confidence 34556677777652 24678888864 789999986 77778899999999999986
No 148
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=25.20 E-value=1.1e+02 Score=30.61 Aligned_cols=87 Identities=17% Similarity=0.155 Sum_probs=51.4
Q ss_pred cCCccchhhhcccccccccceEEEEEEeeCCCCCChHHHHHHHHHHHHhCCCCCcEEECCCchhHHHHHHH--cCEEEEc
Q 005746 553 FGSGHLRRKVLSKSDGKQQQALKILIGSVGSKSNKVPYVKEILEFLSQHSNLSKAMLWTPATTRVASLYSA--ADVYVIN 630 (679)
Q Consensus 553 ~~~~~~~~~~~~~l~~~~~~a~lvLiG~VGs~snk~~y~k~~L~~L~~~lnLs~~V~ftG~~tdVaslysA--ADV~Vlp 630 (679)
+|.+..-...++.+ .+++.++ +.+....... .+ .+....+++++... ..+++.++++. .|++++.
T Consensus 8 iG~G~~~~~~~~~l---~~~~~lv--av~d~~~~~~--~~-~~~~~~~~~~~~~~-----~~~~~~~ll~~~~vD~V~I~ 74 (337)
T 3ip3_A 8 IGSSGHFRYALEGL---DEECSIT--GIAPGVPEED--LS-KLEKAISEMNIKPK-----KYNNWWEMLEKEKPDILVIN 74 (337)
T ss_dssp ECSSSCHHHHHTTC---CTTEEEE--EEECSSTTCC--CH-HHHHHHHTTTCCCE-----ECSSHHHHHHHHCCSEEEEC
T ss_pred EccchhHHHHHHhc---CCCcEEE--EEecCCchhh--HH-HHHHHHHHcCCCCc-----ccCCHHHHhcCCCCCEEEEe
Confidence 34433333556665 5666555 3343321010 11 23333444565322 24788888876 8999999
Q ss_pred CCCCCCCccHHHHHHHHcCCCEEE
Q 005746 631 SQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 631 Sq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
+. ...-.-.+++|+..|++|++
T Consensus 75 tp--~~~H~~~~~~al~aGkhVl~ 96 (337)
T 3ip3_A 75 TV--FSLNGKILLEALERKIHAFV 96 (337)
T ss_dssp SS--HHHHHHHHHHHHHTTCEEEE
T ss_pred CC--cchHHHHHHHHHHCCCcEEE
Confidence 85 55566679999999999885
No 149
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=25.19 E-value=1.5e+02 Score=30.18 Aligned_cols=61 Identities=13% Similarity=0.131 Sum_probs=42.0
Q ss_pred HHHHHHHHhCCCCCcEEECCCc-hhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHH-cCCCEEEeCCC
Q 005746 593 EILEFLSQHSNLSKAMLWTPAT-TRVASLYSAADVYVINSQGLGETFGRVTIEAMA-FGVPKNISQIE 658 (679)
Q Consensus 593 ~~L~~L~~~lnLs~~V~ftG~~-tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA-~GlPVV~S~~g 658 (679)
.+|.+..++.||+ +.=..+. +.+.-+-..+|++-++|+ +.--..+++++| .|+||+.+.--
T Consensus 92 ~~l~~~~~~~Gl~--~~te~~d~~~~~~l~~~vd~~kIgs~---~~~n~~ll~~~a~~~kPV~lk~G~ 154 (276)
T 1vs1_A 92 KLLRRAGDEAGLP--VVTEVLDPRHVETVSRYADMLQIGAR---NMQNFPLLREVGRSGKPVLLKRGF 154 (276)
T ss_dssp HHHHHHHHHHTCC--EEEECCCGGGHHHHHHHCSEEEECGG---GTTCHHHHHHHHHHTCCEEEECCT
T ss_pred HHHHHHHHHcCCc--EEEecCCHHHHHHHHHhCCeEEECcc---cccCHHHHHHHHccCCeEEEcCCC
Confidence 4466677888886 4444553 344444455999999994 665666676666 79999998755
No 150
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=25.09 E-value=1.1e+02 Score=30.11 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=31.0
Q ss_pred chhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEe
Q 005746 614 TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNIS 655 (679)
Q Consensus 614 ~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S 655 (679)
.++...+-..+|++++.+. .....-.+++|+..|++|++-
T Consensus 56 ~~~~~~l~~~~D~V~i~tp--~~~h~~~~~~al~~G~~v~~e 95 (319)
T 1tlt_A 56 ADSLSSLAASCDAVFVHSS--TASHFDVVSTLLNAGVHVCVD 95 (319)
T ss_dssp CSSHHHHHTTCSEEEECSC--TTHHHHHHHHHHHTTCEEEEE
T ss_pred cCcHHHhhcCCCEEEEeCC--chhHHHHHHHHHHcCCeEEEe
Confidence 3445555467899999985 666777889999999999974
No 151
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=25.07 E-value=1.1e+02 Score=28.43 Aligned_cols=56 Identities=25% Similarity=0.361 Sum_probs=36.2
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEE-EEE-eCCCCCChhHHhcCCeEEEE
Q 005746 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVS-AVV-LSKRGGLMPELARRKIKVLE 299 (679)
Q Consensus 241 ~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~Vs-aVv-Ls~~GgL~~EL~rrgIkVl~ 299 (679)
..++||+| -+.=.||+ +|.+.+..|.++|+.+. +++ +.+.++-.+.+.+.++++..
T Consensus 105 ~gk~VllV-DDvitTG~--Tl~~~~~~L~~~Ga~~v~~~~l~~r~~~~~~~l~~~g~~~~s 162 (178)
T 2yzk_A 105 PKGRVVVV-DDVATTGT--SIAKSIEVLRSNGYTVGTALVLVDRGEGAGELLARMGVRLVS 162 (178)
T ss_dssp CSSEEEEE-EEEESSSH--HHHHHHHHHHHTTCEEEEEEEEEECCSSHHHHHHTTTCEEEE
T ss_pred CCCEEEEE-EeccCCcH--HHHHHHHHHHHcCCeEEEEEEEEEcCcCHHHHHHHcCCcEEE
Confidence 45666665 45556777 66788888999998863 333 33434445667777877764
No 152
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=24.94 E-value=65 Score=32.09 Aligned_cols=52 Identities=19% Similarity=0.174 Sum_probs=40.3
Q ss_pred HHHHHHhCCCCCcEEECCCchhHHHHHHH--cCEEEEcCCCCCCCccHHHHHHHHcCCCEEE
Q 005746 595 LEFLSQHSNLSKAMLWTPATTRVASLYSA--ADVYVINSQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 595 L~~L~~~lnLs~~V~ftG~~tdVaslysA--ADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
.+.+++.+|++. ..++..++++. .|++++.+. ...-.-.+++|+.+|++|++
T Consensus 70 a~~~a~~~g~~~------~y~d~~ell~~~~iDaV~IatP--~~~H~~~a~~al~aGkhVl~ 123 (393)
T 4fb5_A 70 AEARAGEFGFEK------ATADWRALIADPEVDVVSVTTP--NQFHAEMAIAALEAGKHVWC 123 (393)
T ss_dssp HHHHHHHHTCSE------EESCHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCCe------ecCCHHHHhcCCCCcEEEECCC--hHHHHHHHHHHHhcCCeEEE
Confidence 455666677652 24788888874 789999996 67778889999999999986
No 153
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=24.89 E-value=1.1e+02 Score=31.04 Aligned_cols=34 Identities=18% Similarity=0.291 Sum_probs=25.1
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCC
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSK 282 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~ 282 (679)
.++||+| ||+ ......+..|++.|+.|+++....
T Consensus 13 ~k~VLVV------GgG-~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLI------GGG-EVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEE------EES-HHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEE------CCc-HHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3566666 444 367788899999999999887543
No 154
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=24.89 E-value=1.2e+02 Score=31.21 Aligned_cols=70 Identities=17% Similarity=0.156 Sum_probs=40.0
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCC-----------CChhHHhcCCeEEEEcCC--Ccch--
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG-----------GLMPELARRKIKVLEDRG--EPSF-- 306 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~G-----------gL~~EL~rrgIkVl~~r~--~~sf-- 306 (679)
++||+++.. +-......+.|.+.||+|.+|+...+. +..+...+.||+|+.... +..+
T Consensus 3 ~mrIvf~Gt-------~~fa~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~ 75 (314)
T 1fmt_A 3 SLRIIFAGT-------PDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQ 75 (314)
T ss_dssp CCEEEEEEC-------SHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHH
T ss_pred CCEEEEEec-------CHHHHHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEecCCCCCHHHHH
Confidence 478888743 223334445666789999877654211 123334568999975322 1112
Q ss_pred -hhhcCcCEEEEc
Q 005746 307 -KTSMKADLVIAG 318 (679)
Q Consensus 307 -k~~~kaDLVia~ 318 (679)
....++|+++.-
T Consensus 76 ~l~~~~~Dliv~~ 88 (314)
T 1fmt_A 76 LVAELQADVMVVV 88 (314)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHhcCCCEEEEe
Confidence 234689998753
No 155
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=24.74 E-value=85 Score=32.12 Aligned_cols=48 Identities=15% Similarity=0.050 Sum_probs=36.4
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHH
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPEL 290 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL 290 (679)
||++.|+..-+--|--...+.||..|+..|..|.+|-+...+++...+
T Consensus 1 MkvIav~s~KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q~~~~~~l 48 (361)
T 3pg5_A 1 MRTISFFNNKGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQCNATQLM 48 (361)
T ss_dssp CEEEEBCCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCTTHHHH
T ss_pred CeEEEEEcCCCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCCCChhhhh
Confidence 477777666554566677889999999999999999888777655443
No 156
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=24.61 E-value=65 Score=30.27 Aligned_cols=33 Identities=18% Similarity=0.017 Sum_probs=22.3
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVv 279 (679)
..|+++|+- |+--.-.++|..|++.|++|.++.
T Consensus 8 ~~k~vlITG-----as~giG~~~a~~l~~~G~~V~~~~ 40 (253)
T 3qiv_A 8 ENKVGIVTG-----SGGGIGQAYAEALAREGAAVVVAD 40 (253)
T ss_dssp TTCEEEEET-----TTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEC-----CCChHHHHHHHHHHHCCCEEEEEc
Confidence 346677742 222245689999999999987654
No 157
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=24.54 E-value=98 Score=27.19 Aligned_cols=39 Identities=21% Similarity=0.126 Sum_probs=28.0
Q ss_pred CCeEEEEeCCCCC---CCHHHHHHHHHHHHHHCCCeEEEEEe
Q 005746 242 SRKFILIFHELSM---TGAPLSMMELATELLSCGATVSAVVL 280 (679)
Q Consensus 242 ~rKILlI~heLsm---gGAplsmmeLAteL~s~G~~VsaVvL 280 (679)
++.+|+++|..+. .........++..|.+.|+.|.++-+
T Consensus 36 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 77 (220)
T 2fuk_A 36 QPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNF 77 (220)
T ss_dssp CSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECC
T ss_pred ccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEec
Confidence 3578999998542 22334567899999999999876643
No 158
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=24.53 E-value=91 Score=27.62 Aligned_cols=58 Identities=17% Similarity=0.171 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcC-CCc-chhh-hcCcCEEEEcc
Q 005746 260 SMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDR-GEP-SFKT-SMKADLVIAGS 319 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r-~~~-sfk~-~~kaDLVia~S 319 (679)
.-..++.+|++.|++|.++.-+.. .+ +++...++.++... .+. ++.. ...+|.|+...
T Consensus 15 iG~~l~~~l~~~g~~V~~~~r~~~-~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 75 (206)
T 1hdo_A 15 TGLTTLAQAVQAGYEVTVLVRDSS-RL-PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL 75 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCGG-GS-CSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHCCCeEEEEEeChh-hc-ccccCCceEEEEecCCCHHHHHHHHcCCCEEEECc
Confidence 456888899999999987753321 11 22223466666432 221 2222 23578887553
No 159
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=24.48 E-value=1e+02 Score=27.00 Aligned_cols=39 Identities=18% Similarity=0.025 Sum_probs=27.9
Q ss_pred CCeEEEEeCCCC---CCCHHHHHHHHHHHHHHCCCeEEEEEe
Q 005746 242 SRKFILIFHELS---MTGAPLSMMELATELLSCGATVSAVVL 280 (679)
Q Consensus 242 ~rKILlI~heLs---mgGAplsmmeLAteL~s~G~~VsaVvL 280 (679)
.+.+|+++|..+ .+.....+..++..|.+.|+.|.++-+
T Consensus 30 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 71 (208)
T 3trd_A 30 KSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNF 71 (208)
T ss_dssp CSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEec
Confidence 356899999853 333344567899999999999876643
No 160
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=24.44 E-value=1.8e+02 Score=27.02 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=33.1
Q ss_pred eEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCC
Q 005746 244 KFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSK 282 (679)
Q Consensus 244 KILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~ 282 (679)
|++.|+..-+-.|.....+.||..|++.|..|.++-+..
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 677777777777888899999999999999999887765
No 161
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=23.92 E-value=86 Score=27.23 Aligned_cols=37 Identities=14% Similarity=0.051 Sum_probs=27.3
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVv 279 (679)
+..|+++|..+..........++..|.+.|+.|.++-
T Consensus 35 ~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 71 (223)
T 2o2g_A 35 TGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLID 71 (223)
T ss_dssp CEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEEC
T ss_pred ceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEc
Confidence 4688999997755443345678899999999976553
No 162
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=23.80 E-value=87 Score=32.19 Aligned_cols=54 Identities=20% Similarity=0.105 Sum_probs=41.2
Q ss_pred HHHHHHHHhCCCCCcEEECCCchhHHHHHH--HcCEEEEcCCCCCCCccHHHHHHHHcCCCEEE
Q 005746 593 EILEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 593 ~~L~~L~~~lnLs~~V~ftG~~tdVaslys--AADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
+..+.++++++.+. ..+++.++++ ..|++++.+. ...-.-.+++|+.+|++|++
T Consensus 70 ~~a~~~a~~~~~~~------~y~d~~~ll~~~~vD~V~I~tp--~~~H~~~~~~al~aGkhVl~ 125 (412)
T 4gqa_A 70 AMAERHAAKLGAEK------AYGDWRELVNDPQVDVVDITSP--NHLHYTMAMAAIAAGKHVYC 125 (412)
T ss_dssp HHHHHHHHHHTCSE------EESSHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCe------EECCHHHHhcCCCCCEEEECCC--cHHHHHHHHHHHHcCCCeEe
Confidence 34556666676642 2467888887 4789999886 67777899999999999986
No 163
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=23.72 E-value=1.7e+02 Score=28.34 Aligned_cols=46 Identities=15% Similarity=0.107 Sum_probs=34.5
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhH
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPE 289 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~E 289 (679)
||++.|. .-+--|--...++||..|+..|+.|.+|-+...++....
T Consensus 2 MkvIavs-~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~q~~~~~~ 47 (289)
T 2afh_E 2 MRQCAIY-GKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKADSTRL 47 (289)
T ss_dssp CEEEEEE-ECTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSSCSSHH
T ss_pred ceEEEEe-CCCcCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCHHHH
Confidence 5777775 344456677788999999999999999888776654443
No 164
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=23.72 E-value=1.4e+02 Score=29.51 Aligned_cols=83 Identities=11% Similarity=0.083 Sum_probs=38.9
Q ss_pred ccCCcccccccCCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHC-CCeEEEEEeCCCCCChhHHhcCCeEEEEcCCC--c-
Q 005746 229 TCDRKGDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSC-GATVSAVVLSKRGGLMPELARRKIKVLEDRGE--P- 304 (679)
Q Consensus 229 ~c~~k~~f~~~~~~rKILlI~heLsmgGAplsmmeLAteL~s~-G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~--~- 304 (679)
-|..+..+..++ .++|| |+ ||.-..-..|+.+|++. |++|.+++-+. ..+.......+++++..... .
T Consensus 12 ~~~~~~~~~~m~-~~~vl-Vt-----GatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~v~~~~~Dl~~d~~ 83 (372)
T 3slg_A 12 LEAQTQGPGSMK-AKKVL-IL-----GVNGFIGHHLSKRILETTDWEVFGMDMQT-DRLGDLVKHERMHFFEGDITINKE 83 (372)
T ss_dssp -----------C-CCEEE-EE-----SCSSHHHHHHHHHHHHHSSCEEEEEESCC-TTTGGGGGSTTEEEEECCTTTCHH
T ss_pred hhhhhcCCcccC-CCEEE-EE-----CCCChHHHHHHHHHHhCCCCEEEEEeCCh-hhhhhhccCCCeEEEeCccCCCHH
Confidence 356666655543 34554 43 22222445788889888 99998776432 23333333467888763222 1
Q ss_pred chh-hhcCcCEEEEcc
Q 005746 305 SFK-TSMKADLVIAGS 319 (679)
Q Consensus 305 sfk-~~~kaDLVia~S 319 (679)
.+. ...++|+||-..
T Consensus 84 ~~~~~~~~~d~Vih~A 99 (372)
T 3slg_A 84 WVEYHVKKCDVILPLV 99 (372)
T ss_dssp HHHHHHHHCSEEEECB
T ss_pred HHHHHhccCCEEEEcC
Confidence 122 123689887543
No 165
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=23.38 E-value=67 Score=32.11 Aligned_cols=53 Identities=19% Similarity=0.224 Sum_probs=39.8
Q ss_pred HHHHHHhCCCCCcEEECCCchhHHHHHH--HcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeC
Q 005746 595 LEFLSQHSNLSKAMLWTPATTRVASLYS--AADVYVINSQGLGETFGRVTIEAMAFGVPKNISQ 656 (679)
Q Consensus 595 L~~L~~~lnLs~~V~ftG~~tdVaslys--AADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~ 656 (679)
.+.+++.+|. ...+++.+++. .+|++++.+. .....-++++|+..|++|++-.
T Consensus 42 ~~~~a~~~g~-------~~~~~~~~~l~~~~~D~V~i~tp--~~~h~~~~~~al~~gk~v~~EK 96 (344)
T 3euw_A 42 AQRLAEANGA-------EAVASPDEVFARDDIDGIVIGSP--TSTHVDLITRAVERGIPALCEK 96 (344)
T ss_dssp HHHHHHTTTC-------EEESSHHHHTTCSCCCEEEECSC--GGGHHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHcCC-------ceeCCHHHHhcCCCCCEEEEeCC--chhhHHHHHHHHHcCCcEEEEC
Confidence 4555665551 12478888888 8999999986 6667778899999999998743
No 166
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=23.31 E-value=1.1e+02 Score=26.65 Aligned_cols=58 Identities=14% Similarity=0.115 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCC-Ccch-hh--hcCcCEEEEcc
Q 005746 260 SMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRG-EPSF-KT--SMKADLVIAGS 319 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~-~~sf-k~--~~kaDLVia~S 319 (679)
.-..+|..|.+.|++|.++. ......+++.+.|+.++.... +... .. ..++|+|++.+
T Consensus 18 ~G~~la~~L~~~g~~v~vid--~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 18 VGSLLGEKLLASDIPLVVIE--TSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp HHHHHHHHHHHTTCCEEEEE--SCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred HHHHHHHHHHHCCCCEEEEE--CCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence 45688889999999998775 333345667778998876432 2222 21 35789988653
No 167
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=23.21 E-value=42 Score=36.00 Aligned_cols=63 Identities=21% Similarity=0.216 Sum_probs=44.0
Q ss_pred HHHHHHHHhCCCCCcEEECCCchhHHHHH----HHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCC
Q 005746 593 EILEFLSQHSNLSKAMLWTPATTRVASLY----SAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIE 658 (679)
Q Consensus 593 ~~L~~L~~~lnLs~~V~ftG~~tdVasly----sAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g 658 (679)
+..+++++. |++.+...|--+|..-|- ..||+||.... -.|.==++.+-|--+|+|-+++-+.
T Consensus 268 ~r~~~la~~--l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~-~De~Ni~~~llAk~~gv~kvIa~vn 334 (461)
T 4g65_A 268 QRAEKLSEE--LENTIVFCGDAADQELLTEENIDQVDVFIALTN-EDETNIMSAMLAKRMGAKKVMVLIQ 334 (461)
T ss_dssp HHHHHHHHH--CTTSEEEESCTTCHHHHHHTTGGGCSEEEECCS-CHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHH--CCCceEEeccccchhhHhhcCchhhcEEEEccc-CcHHHHHHHHHHHHcCCcccccccc
Confidence 345556664 466777777777765554 55888887775 4677777888888888888877654
No 168
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=23.17 E-value=1.3e+02 Score=28.53 Aligned_cols=20 Identities=15% Similarity=0.084 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHCCCeEEEEE
Q 005746 260 SMMELATELLSCGATVSAVV 279 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVv 279 (679)
.-..+|..|++.|++|.++.
T Consensus 19 IG~~ia~~l~~~G~~V~~~~ 38 (249)
T 2ew8_A 19 IGRAIAERFAVEGADIAIAD 38 (249)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEc
Confidence 44578999999999987664
No 169
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=23.10 E-value=1.2e+02 Score=29.83 Aligned_cols=33 Identities=15% Similarity=-0.044 Sum_probs=22.3
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVv 279 (679)
..|+++|+-. +--.-..+|..|++.|++|.++.
T Consensus 48 ~~k~vlVTGa-----s~GIG~aia~~la~~G~~V~~~~ 80 (294)
T 3r3s_A 48 KDRKALVTGG-----DSGIGRAAAIAYAREGADVAINY 80 (294)
T ss_dssp TTCEEEEETT-----TSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEeCC-----CcHHHHHHHHHHHHCCCEEEEEe
Confidence 4567777432 22244588999999999987654
No 170
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=23.02 E-value=95 Score=28.42 Aligned_cols=37 Identities=27% Similarity=0.321 Sum_probs=26.4
Q ss_pred CeEEEEeCCCCCCCHHHHHHH-HHHHHHH-CCCeEEEEEeC
Q 005746 243 RKFILIFHELSMTGAPLSMME-LATELLS-CGATVSAVVLS 281 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmme-LAteL~s-~G~~VsaVvLs 281 (679)
+||++|..+ ++|.-..|.+ ++..|.+ .|++|.++-+.
T Consensus 5 ~kiliiy~S--~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~ 43 (188)
T 2ark_A 5 GKVLVIYDT--RTGNTKKMAELVAEGARSLEGTEVRLKHVD 43 (188)
T ss_dssp EEEEEEECC--SSSHHHHHHHHHHHHHHTSTTEEEEEEETT
T ss_pred CEEEEEEEC--CCcHHHHHHHHHHHHHhhcCCCeEEEEEhh
Confidence 478888776 6777665555 6667777 89998877654
No 171
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=22.98 E-value=82 Score=33.52 Aligned_cols=46 Identities=11% Similarity=0.046 Sum_probs=0.0
Q ss_pred CCCc---------EEECCCchhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEE
Q 005746 604 LSKA---------MLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 604 Ls~~---------V~ftG~~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
+++. +...++.+.. .+|+.+||-++=+.+ =-..++||+++|+|+|+
T Consensus 328 lp~~~~~~~~~~g~~v~~w~Pq~-~vL~h~~v~~fvtHg----G~~S~~Eal~~GvP~i~ 382 (480)
T 2vch_A 328 LPPGFLERTKKRGFVIPFWAPQA-QVLAHPSTGGFLTHC----GWNSTLESVVSGIPLIA 382 (480)
T ss_dssp SCTTHHHHTTTTEEEEESCCCHH-HHHHSTTEEEEEECC----CHHHHHHHHHHTCCEEE
T ss_pred cCHHHHHHhCCCeEEEeCccCHH-HHhCCCCcCeEEecc----cchhHHHHHHcCCCEEe
No 172
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=22.92 E-value=1.3e+02 Score=29.59 Aligned_cols=71 Identities=11% Similarity=0.167 Sum_probs=42.3
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHC--CCeEEEEEeCCCCCC-hhHHhcCCeEEEEcC-CC--------cch---h
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSC--GATVSAVVLSKRGGL-MPELARRKIKVLEDR-GE--------PSF---K 307 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~--G~~VsaVvLs~~GgL-~~EL~rrgIkVl~~r-~~--------~sf---k 307 (679)
+||++++- -+| ..+..+...|.+. +++|.+|+..++... .+...+.||+++... .. ..+ -
T Consensus 23 ~rI~~l~S---G~g--~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l 97 (229)
T 3auf_A 23 IRIGVLIS---GSG--TNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPSRTAFDAALAERL 97 (229)
T ss_dssp EEEEEEES---SCC--HHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSSHHHHHHHHHHHH
T ss_pred cEEEEEEe---CCc--HHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccchhhccHHHHHHH
Confidence 57887732 223 3566777777766 678877765544432 344567899998522 11 111 1
Q ss_pred hhcCcCEEEEc
Q 005746 308 TSMKADLVIAG 318 (679)
Q Consensus 308 ~~~kaDLVia~ 318 (679)
...++|+|+.-
T Consensus 98 ~~~~~Dliv~a 108 (229)
T 3auf_A 98 QAYGVDLVCLA 108 (229)
T ss_dssp HHTTCSEEEES
T ss_pred HhcCCCEEEEc
Confidence 24689999764
No 173
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=22.67 E-value=1.4e+02 Score=27.55 Aligned_cols=42 Identities=17% Similarity=0.074 Sum_probs=35.2
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHC-CCeEEEEEeCCC
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSC-GATVSAVVLSKR 283 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~-G~~VsaVvLs~~ 283 (679)
.+|++.|+..-+-.|.....+.||..|++. |..|.++-+...
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 357888877777778888899999999998 999998877655
No 174
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=22.39 E-value=1.2e+02 Score=29.44 Aligned_cols=71 Identities=14% Similarity=0.240 Sum_probs=41.9
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHC--CCeEEEEEeCCCCC-ChhHHhcCCeEEEEcCC-C-c-------ch---h
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSC--GATVSAVVLSKRGG-LMPELARRKIKVLEDRG-E-P-------SF---K 307 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~--G~~VsaVvLs~~Gg-L~~EL~rrgIkVl~~r~-~-~-------sf---k 307 (679)
+||.+++ +-+| ..+..+...|.+. +++|.+|+..++.. ..+...+.||+++.... . . .+ -
T Consensus 4 ~ki~vl~---sG~g--~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l 78 (212)
T 3av3_A 4 KRLAVFA---SGSG--TNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFESEILREL 78 (212)
T ss_dssp EEEEEEC---CSSC--HHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred cEEEEEE---ECCc--HHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHH
Confidence 3676663 2233 3566777778776 68988776554443 33445678999985321 1 0 11 1
Q ss_pred hhcCcCEEEEc
Q 005746 308 TSMKADLVIAG 318 (679)
Q Consensus 308 ~~~kaDLVia~ 318 (679)
...++|+++.-
T Consensus 79 ~~~~~Dliv~a 89 (212)
T 3av3_A 79 KGRQIDWIALA 89 (212)
T ss_dssp HHTTCCEEEES
T ss_pred HhcCCCEEEEc
Confidence 24689998764
No 175
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=22.32 E-value=2.5e+02 Score=27.72 Aligned_cols=60 Identities=17% Similarity=0.162 Sum_probs=33.8
Q ss_pred HHHHHHHHHHH--CCCeEEEEEeCCCC-----------CChhHHhcCCeEEEEc-CCCc-chhh--hcCcCEEEEcc
Q 005746 260 SMMELATELLS--CGATVSAVVLSKRG-----------GLMPELARRKIKVLED-RGEP-SFKT--SMKADLVIAGS 319 (679)
Q Consensus 260 smmeLAteL~s--~G~~VsaVvLs~~G-----------gL~~EL~rrgIkVl~~-r~~~-sfk~--~~kaDLVia~S 319 (679)
.-..|+..|++ .|++|.++.-.... .-...+...++.++.. -.+. ++.. ..++|+||-..
T Consensus 22 IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~D~vih~A 98 (362)
T 3sxp_A 22 VGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLHFDYLFHQA 98 (362)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTSCCSEEEECC
T ss_pred HHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhccCCCEEEECC
Confidence 45578889999 99999887643320 1122333445565542 2221 2222 35789887654
No 176
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=22.14 E-value=1.7e+02 Score=27.57 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=33.1
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChh
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMP 288 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~ 288 (679)
||++.|. .-+--|--...++||..|+..|+.|.++-+...++...
T Consensus 1 M~vI~vs-~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q~~~~~ 45 (269)
T 1cp2_A 1 MRQVAIY-GKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKADSTR 45 (269)
T ss_dssp CEEEEEE-ECTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTSCSSH
T ss_pred CcEEEEe-cCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCCCCHHH
Confidence 4666664 34444666778899999999999999888776665443
No 177
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=21.93 E-value=2.4e+02 Score=26.01 Aligned_cols=71 Identities=14% Similarity=0.231 Sum_probs=40.3
Q ss_pred CCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcchhhh---cCcCEEE
Q 005746 240 VWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTS---MKADLVI 316 (679)
Q Consensus 240 ~~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~sfk~~---~kaDLVi 316 (679)
|+.+||+++..+ |=.+..+......|...|++|.++....+.... ...|+++..+ ..+... ..+|+|+
T Consensus 1 mm~~~v~ill~~---g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~v~---~~~g~~v~~d---~~l~~~~~~~~~D~li 71 (197)
T 2rk3_A 1 MASKRALVILAK---GAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQ---CSRDVVICPD---ASLEDAKKEGPYDVVV 71 (197)
T ss_dssp -CCCEEEEEECT---TCCHHHHHHHHHHHHHTTCEEEEEETTCSSCEE---CTTSCEECCS---EEHHHHHTTCCCSEEE
T ss_pred CCCCEEEEEECC---CCcHHHHHHHHHHHHHCCCEEEEEEcCCCCccc---cCCCCEEeCC---cCHHHcCCccCCCEEE
Confidence 456788877654 222344555666788899999877543211221 2356665433 344443 5789887
Q ss_pred Ecc
Q 005746 317 AGS 319 (679)
Q Consensus 317 a~S 319 (679)
.-.
T Consensus 72 vpG 74 (197)
T 2rk3_A 72 LPG 74 (197)
T ss_dssp ECC
T ss_pred ECC
Confidence 643
No 178
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=21.86 E-value=1.5e+02 Score=32.62 Aligned_cols=80 Identities=21% Similarity=0.231 Sum_probs=49.2
Q ss_pred ccccccCCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCC-C----hhHHhc----CCeEEEEcCCCc
Q 005746 234 GDFARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG-L----MPELAR----RKIKVLEDRGEP 304 (679)
Q Consensus 234 ~~f~~~~~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~Gg-L----~~EL~r----rgIkVl~~r~~~ 304 (679)
.|+......+|+++. |.+.....|+..|.++|.+|..+....... + .+.+.. .+..|+......
T Consensus 356 ~d~~~~l~GKrvaI~-------gd~~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~D~~ 428 (523)
T 3u7q_B 356 TDSHTWLHGKRFALW-------GDPDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKDLW 428 (523)
T ss_dssp HHHHHHHTTCEEEEE-------CSHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCCHH
T ss_pred HHHHHhcCCCEEEEE-------CCchHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEECCCHH
Confidence 344445567888775 345677889999999999998776543221 1 122222 145676653322
Q ss_pred ch---hhhcCcCEEEEcch
Q 005746 305 SF---KTSMKADLVIAGSA 320 (679)
Q Consensus 305 sf---k~~~kaDLVia~Sa 320 (679)
.+ -...++||++.++.
T Consensus 429 ~l~~~i~~~~pDLlig~s~ 447 (523)
T 3u7q_B 429 HLRSLVFTDKPDFMIGNSY 447 (523)
T ss_dssp HHHHHHHHTCCSEEEECTT
T ss_pred HHHHHHHhcCCCEEEECcc
Confidence 22 23468999999984
No 179
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=21.63 E-value=1.1e+02 Score=30.82 Aligned_cols=65 Identities=18% Similarity=0.221 Sum_probs=38.7
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcchhhhcCcCEEEEc
Q 005746 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAG 318 (679)
Q Consensus 241 ~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~sfk~~~kaDLVia~ 318 (679)
|++||-+| .|+.=|. .+|..|++.||+|++.- ....-.++|.+.|.++.....+ ...+.|+|+..
T Consensus 4 Ms~kIgfI--GLG~MG~-----~mA~~L~~~G~~V~v~d--r~~~~~~~l~~~G~~~~~s~~e----~~~~~dvvi~~ 68 (297)
T 4gbj_A 4 MSEKIAFL--GLGNLGT-----PIAEILLEAGYELVVWN--RTASKAEPLTKLGATVVENAID----AITPGGIVFSV 68 (297)
T ss_dssp CCCEEEEE--CCSTTHH-----HHHHHHHHTTCEEEEC---------CTTTTTTCEECSSGGG----GCCTTCEEEEC
T ss_pred CCCcEEEE--ecHHHHH-----HHHHHHHHCCCeEEEEe--CCHHHHHHHHHcCCeEeCCHHH----HHhcCCceeee
Confidence 45687777 3554344 47888999999987653 3334455677778777544322 23467888764
No 180
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=21.63 E-value=1.2e+02 Score=30.34 Aligned_cols=73 Identities=12% Similarity=0.010 Sum_probs=41.4
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCc-------chhhhcCcCEE
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEP-------SFKTSMKADLV 315 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~-------sfk~~~kaDLV 315 (679)
-|+++|+ ||+.=--..+|..|++.|++|.+..........+++.+.+.++.....+. ......+.|++
T Consensus 9 GKvalVT-----Gas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 9 GRKALVT-----GANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp TCEEEET-----TTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCEEEEe-----CcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 4677773 23322345788999999999876643322223455666665544322111 11123468999
Q ss_pred EEcch
Q 005746 316 IAGSA 320 (679)
Q Consensus 316 ia~Sa 320 (679)
+.|..
T Consensus 84 VNNAG 88 (247)
T 4hp8_A 84 VNNAG 88 (247)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 87753
No 181
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=21.61 E-value=1.5e+02 Score=29.31 Aligned_cols=67 Identities=19% Similarity=0.267 Sum_probs=38.7
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcc---------hhhhcCc
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPS---------FKTSMKA 312 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~s---------fk~~~ka 312 (679)
++||.+| ..+.-| .-+|..|.+.|++|+++. + .. .+.+.+.|+.+....+... ......+
T Consensus 2 ~mkI~Ii--GaGaiG-----~~~a~~L~~~g~~V~~~~--r-~~-~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~ 70 (312)
T 3hn2_A 2 SLRIAIV--GAGALG-----LYYGALLQRSGEDVHFLL--R-RD-YEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPM 70 (312)
T ss_dssp --CEEEE--CCSTTH-----HHHHHHHHHTSCCEEEEC--S-TT-HHHHHHTCEEEEETTCCEEESCCCEESCHHHHCCC
T ss_pred CCEEEEE--CcCHHH-----HHHHHHHHHCCCeEEEEE--c-Cc-HHHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCC
Confidence 4677766 222222 246778888999988764 3 33 4778888887754322211 1223468
Q ss_pred CEEEEcc
Q 005746 313 DLVIAGS 319 (679)
Q Consensus 313 DLVia~S 319 (679)
|+|+...
T Consensus 71 D~vilav 77 (312)
T 3hn2_A 71 DLVLVGL 77 (312)
T ss_dssp SEEEECC
T ss_pred CEEEEec
Confidence 9988754
No 182
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=21.61 E-value=92 Score=29.69 Aligned_cols=32 Identities=19% Similarity=0.089 Sum_probs=21.6
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVv 279 (679)
.|.++|+ ||+--.-.++|.+|++.|++|.++.
T Consensus 29 ~k~vlIT-----Gas~gIG~~la~~l~~~G~~V~~~~ 60 (262)
T 3rkr_A 29 GQVAVVT-----GASRGIGAAIARKLGSLGARVVLTA 60 (262)
T ss_dssp TCEEEES-----STTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEE-----CCCChHHHHHHHHHHHCCCEEEEEE
Confidence 4667773 2222345688999999999986653
No 183
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=21.56 E-value=67 Score=32.68 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=33.0
Q ss_pred chhHHHHHHHc--CEEEEcCCCCCCCccHHHHHHHHcCCCEEE
Q 005746 614 TTRVASLYSAA--DVYVINSQGLGETFGRVTIEAMAFGVPKNI 654 (679)
Q Consensus 614 ~tdVaslysAA--DV~VlpSq~~~EgFGrV~IEAMA~GlPVV~ 654 (679)
.+++.+++... |++++.+. ...-.-.+++|+..|++|++
T Consensus 57 ~~~~~~ll~~~~vD~V~i~tp--~~~H~~~~~~al~aGkhVl~ 97 (359)
T 3m2t_A 57 LDNVPAMLNQVPLDAVVMAGP--PQLHFEMGLLAMSKGVNVFV 97 (359)
T ss_dssp ESSHHHHHHHSCCSEEEECSC--HHHHHHHHHHHHHTTCEEEE
T ss_pred cCCHHHHhcCCCCCEEEEcCC--cHHHHHHHHHHHHCCCeEEE
Confidence 47889999876 99999885 66667788999999999987
No 184
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=21.51 E-value=91 Score=32.22 Aligned_cols=69 Identities=20% Similarity=0.236 Sum_probs=40.1
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCC--C---------ChhHHhcCCeEEEEcCCC--cch---
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG--G---------LMPELARRKIKVLEDRGE--PSF--- 306 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~G--g---------L~~EL~rrgIkVl~~r~~--~sf--- 306 (679)
+||||+.. |-......+.|.+.||+|.+|+...+. | +.+...+.||+|+..... ..+
T Consensus 5 mrIvf~Gt-------p~fa~~~L~~L~~~~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~~~~~~~~~~~ 77 (317)
T 3rfo_A 5 IKVVFMGT-------PDFSVPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQPLRIREKDEYEK 77 (317)
T ss_dssp SEEEEECC-------STTHHHHHHHHHHTTCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECCSCTTSHHHHHH
T ss_pred eEEEEEeC-------CHHHHHHHHHHHHCCCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEccccCCCHHHHHH
Confidence 68888733 223334455677789999887754322 1 123345689999853221 111
Q ss_pred hhhcCcCEEEEc
Q 005746 307 KTSMKADLVIAG 318 (679)
Q Consensus 307 k~~~kaDLVia~ 318 (679)
....++|+++.-
T Consensus 78 l~~~~~Dliv~~ 89 (317)
T 3rfo_A 78 VLALEPDLIVTA 89 (317)
T ss_dssp HHHHCCSEEEES
T ss_pred HHhcCCCEEEEc
Confidence 234689999864
No 185
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=21.27 E-value=1e+02 Score=29.49 Aligned_cols=51 Identities=16% Similarity=0.120 Sum_probs=28.6
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCC--CChhHHhcCCeEEE
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG--GLMPELARRKIKVL 298 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~G--gL~~EL~rrgIkVl 298 (679)
.|+++|+-. +.-.-..+|..|++.|++|.++..+... .+..++...+.++.
T Consensus 7 ~k~vlVTGa-----s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~ 59 (252)
T 3h7a_A 7 NATVAVIGA-----GDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIV 59 (252)
T ss_dssp SCEEEEECC-----SSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEE
T ss_pred CCEEEEECC-----CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE
Confidence 456666422 2223458899999999998766432111 12344555554443
No 186
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=21.26 E-value=2e+02 Score=27.95 Aligned_cols=34 Identities=18% Similarity=0.062 Sum_probs=22.9
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVL 280 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvL 280 (679)
..|+++|+ ||+.-.-..+|..|++.|++|.++..
T Consensus 32 ~gk~~lVT-----Gas~GIG~aia~~la~~G~~V~~~~r 65 (275)
T 4imr_A 32 RGRTALVT-----GSSRGIGAAIAEGLAGAGAHVILHGV 65 (275)
T ss_dssp TTCEEEET-----TCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEE-----CCCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 34677772 22223456889999999999876654
No 187
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=21.25 E-value=1.2e+02 Score=29.36 Aligned_cols=71 Identities=11% Similarity=0.142 Sum_probs=41.7
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCC--eEEEEEeCCCCC-ChhHHhcCCeEEEEcC-CC--------cch---h
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGA--TVSAVVLSKRGG-LMPELARRKIKVLEDR-GE--------PSF---K 307 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~--~VsaVvLs~~Gg-L~~EL~rrgIkVl~~r-~~--------~sf---k 307 (679)
+||++++ |-+| ..+..+...|.+.++ +|.+|+..++.. ..+...+.||+++... .. ..+ -
T Consensus 2 ~rI~vl~---SG~g--~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l 76 (216)
T 2ywr_A 2 LKIGVLV---SGRG--SNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALEL 76 (216)
T ss_dssp EEEEEEE---CSCC--HHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred CEEEEEE---eCCc--HHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHH
Confidence 3677662 2233 366777888888777 777666554443 2334556899988521 11 111 1
Q ss_pred hhcCcCEEEEc
Q 005746 308 TSMKADLVIAG 318 (679)
Q Consensus 308 ~~~kaDLVia~ 318 (679)
...++|+++.-
T Consensus 77 ~~~~~Dliv~a 87 (216)
T 2ywr_A 77 KKKGVELVVLA 87 (216)
T ss_dssp HHTTCCEEEES
T ss_pred HhcCCCEEEEe
Confidence 24589999764
No 188
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=21.19 E-value=3.1e+02 Score=26.72 Aligned_cols=58 Identities=16% Similarity=0.169 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCCC--hhHH-hcCCeEEEEcC-CCcchhhhcCcCEEEEcch
Q 005746 260 SMMELATELLSCGATVSAVVLSKRGGL--MPEL-ARRKIKVLEDR-GEPSFKTSMKADLVIAGSA 320 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVvLs~~GgL--~~EL-~rrgIkVl~~r-~~~sfk~~~kaDLVia~Sa 320 (679)
.-..|+..|++.|++|.++.-...+.. ..++ ...++.++... .+.. ...+|+||...+
T Consensus 39 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~d~vih~A~ 100 (343)
T 2b69_A 39 VGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL---YIEVDQIYHLAS 100 (343)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC---CCCCSEEEECCS
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh---hcCCCEEEECcc
Confidence 456788899999999987764322211 1112 22456666532 2222 246898876543
No 189
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=21.16 E-value=1.1e+02 Score=30.60 Aligned_cols=59 Identities=20% Similarity=0.263 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcch-----hhhcCcCEEEEcchh
Q 005746 260 SMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSF-----KTSMKADLVIAGSAV 321 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~sf-----k~~~kaDLVia~Sav 321 (679)
.-..+|+++..+|++|.++. ....+.+. ...++.+++....... .....+|++|.+.++
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~--~~~~~~~~-~~~~~~~~~v~s~~em~~~v~~~~~~~Dili~aAAv 94 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLIT--TKRALKPE-PHPNLSIREITNTKDLLIEMQERVQDYQVLIHSMAV 94 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEE--CTTSCCCC-CCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECSBC
T ss_pred HHHHHHHHHHHCCCEEEEEe--CCcccccc-CCCCeEEEEHhHHHHHHHHHHHhcCCCCEEEEcCcc
Confidence 34578999999999998774 33333221 1235666654321111 112356777765543
No 190
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=21.11 E-value=3e+02 Score=25.17 Aligned_cols=70 Identities=21% Similarity=0.297 Sum_probs=41.4
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcchhh--hcCcCEEEEc
Q 005746 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKT--SMKADLVIAG 318 (679)
Q Consensus 241 ~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~sfk~--~~kaDLVia~ 318 (679)
+.+||+++..+ +=.+.-+......|...|++|.++....++... ...|+++..+. .+.. ...+|+|+.-
T Consensus 4 m~kkv~ill~~---g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~v~---~~~g~~i~~d~---~l~~~~~~~~D~livp 74 (190)
T 4e08_A 4 MSKSALVILAP---GAEEMEFIIAADVLRRAGIKVTVAGLNGGEAVK---CSRDVQILPDT---SLAQVASDKFDVVVLP 74 (190)
T ss_dssp CCCEEEEEECT---TCCHHHHHHHHHHHHHTTCEEEEEESSSSSCEE---CTTSCEEECSE---ETGGGTTCCCSEEEEC
T ss_pred CCcEEEEEECC---CchHHHHHHHHHHHHHCCCEEEEEECCCCccee---cCCCcEEECCC---CHHHCCcccCCEEEEC
Confidence 46788877663 222344555566788899999888654323322 24577776553 2322 2358988764
Q ss_pred c
Q 005746 319 S 319 (679)
Q Consensus 319 S 319 (679)
.
T Consensus 75 G 75 (190)
T 4e08_A 75 G 75 (190)
T ss_dssp C
T ss_pred C
Confidence 3
No 191
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=21.01 E-value=1.9e+02 Score=26.76 Aligned_cols=21 Identities=19% Similarity=0.017 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHCCCeEEEEEe
Q 005746 260 SMMELATELLSCGATVSAVVL 280 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVvL 280 (679)
.-..+|..|++.|++|.++.-
T Consensus 19 iG~~~a~~l~~~G~~V~~~~r 39 (258)
T 3afn_B 19 IGLATARLFARAGAKVGLHGR 39 (258)
T ss_dssp HHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHCCCEEEEECC
Confidence 455788999999999877653
No 192
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=20.93 E-value=1.6e+02 Score=31.40 Aligned_cols=78 Identities=22% Similarity=0.247 Sum_probs=48.0
Q ss_pred ccccCCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCC-ChhH----HhcC---CeEEEEcCCCcch-
Q 005746 236 FARFVWSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG-LMPE----LARR---KIKVLEDRGEPSF- 306 (679)
Q Consensus 236 f~~~~~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~Gg-L~~E----L~rr---gIkVl~~r~~~sf- 306 (679)
+......+|+++. ++ +.....|+..|.+.|.+|..+....... +.++ +... ..+|+.......+
T Consensus 306 ~~~~l~gkrv~i~------~~-~~~~~~l~~~L~elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~~~d~~~l~ 378 (458)
T 1mio_B 306 AQQYLQGKKVALL------GD-PDEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVEGDFFDVH 378 (458)
T ss_dssp THHHHTTCEEEEE------EC-HHHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEESCBHHHHH
T ss_pred HHHHcCCCEEEEE------cC-chHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEECCCHHHHH
Confidence 4334467788776 33 4678899999999999998776554332 1111 3333 3467665222112
Q ss_pred --hhhcCcCEEEEcch
Q 005746 307 --KTSMKADLVIAGSA 320 (679)
Q Consensus 307 --k~~~kaDLVia~Sa 320 (679)
....++|+++.++.
T Consensus 379 ~~i~~~~pDl~ig~~~ 394 (458)
T 1mio_B 379 QWIKNEGVDLLISNTY 394 (458)
T ss_dssp HHHHHSCCSEEEESGG
T ss_pred HHHHhcCCCEEEeCcc
Confidence 23458999999875
No 193
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=20.87 E-value=1.8e+02 Score=27.81 Aligned_cols=43 Identities=16% Similarity=0.088 Sum_probs=34.8
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCC
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG 285 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~Gg 285 (679)
.|++.|+..-+-.|.......||..|++.|..|.++-+...++
T Consensus 18 ~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~~ 60 (262)
T 2ph1_A 18 KSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLGP 60 (262)
T ss_dssp SCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSCC
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 5677777776667888889999999999999998887665553
No 194
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=20.71 E-value=55 Score=31.33 Aligned_cols=52 Identities=21% Similarity=0.153 Sum_probs=34.1
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCC----CChhHHhcC-CeEEEE
Q 005746 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG----GLMPELARR-KIKVLE 299 (679)
Q Consensus 241 ~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~G----gL~~EL~rr-gIkVl~ 299 (679)
..+++++| | +-.+.+++|..|.+.|.+|+++.....- .+..++.+. ||+++.
T Consensus 172 ~~~~v~vv------G-~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~~~~~~~~l~~~~gv~i~~ 228 (338)
T 3itj_A 172 RNKPLAVI------G-GGDSACEEAQFLTKYGSKVFMLVRKDHLRASTIMQKRAEKNEKIEILY 228 (338)
T ss_dssp TTSEEEEE------C-SSHHHHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHHHHCTTEEEEC
T ss_pred CCCEEEEE------C-CCHHHHHHHHHHHhcCCEEEEEEcCCccCCCHHHHHHHHhcCCeEEee
Confidence 45678777 2 2347889999999999999877532211 123455554 888764
No 195
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=20.65 E-value=35 Score=35.09 Aligned_cols=46 Identities=17% Similarity=-0.002 Sum_probs=35.8
Q ss_pred chhHHHHHHHcCEEEEcCCCCCCCccHHHHHHHHcCCCEEEeCCCCCc
Q 005746 614 TTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGVPKNISQIELSR 661 (679)
Q Consensus 614 ~tdVaslysAADV~VlpSq~~~EgFGrV~IEAMA~GlPVV~S~~g~~r 661 (679)
++++.+++..+||.|--|. .+..--.+..|...|+|||+..+|...
T Consensus 79 ~~dl~~ll~~aDVvIDFT~--p~a~~~~~~~~l~~Gv~vViGTTG~~~ 124 (288)
T 3ijp_A 79 TDDPESAFSNTEGILDFSQ--PQASVLYANYAAQKSLIHIIGTTGFSK 124 (288)
T ss_dssp BSCHHHHTTSCSEEEECSC--HHHHHHHHHHHHHHTCEEEECCCCCCH
T ss_pred eCCHHHHhcCCCEEEEcCC--HHHHHHHHHHHHHcCCCEEEECCCCCH
Confidence 5688888899999997774 555444566789999999998888654
No 196
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=20.56 E-value=1.3e+02 Score=26.46 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=27.1
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVL 280 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvL 280 (679)
+..|+++|..+ |.......++..|.+.|+.|.++-+
T Consensus 28 ~p~vv~~hG~~--~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 28 APVIVIAQDIF--GVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEEEECCTT--BSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCEEEEEcCCC--CCCHHHHHHHHHHHhCCcEEEeccc
Confidence 35789999854 3344778899999999999876643
No 197
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=20.44 E-value=1.4e+02 Score=28.42 Aligned_cols=70 Identities=17% Similarity=0.234 Sum_probs=36.5
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCC-------ChhHHhcCCeEEEEcCC-C-cchhhh-cCcCE
Q 005746 245 FILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGG-------LMPELARRKIKVLEDRG-E-PSFKTS-MKADL 314 (679)
Q Consensus 245 ILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~Gg-------L~~EL~rrgIkVl~~r~-~-~sfk~~-~kaDL 314 (679)
-++|+-..+.-|. .++..|++.|++|.+++-..... ...++...+++++.... + .++..+ ..+|.
T Consensus 6 ~ilVtGatG~iG~-----~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~ 80 (308)
T 1qyc_A 6 RILLIGATGYIGR-----HVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDV 80 (308)
T ss_dssp CEEEESTTSTTHH-----HHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred EEEEEcCCcHHHH-----HHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCE
Confidence 3555444333343 67788999999987654322111 01234457888775321 1 122221 24677
Q ss_pred EEEcc
Q 005746 315 VIAGS 319 (679)
Q Consensus 315 Via~S 319 (679)
|+...
T Consensus 81 vi~~a 85 (308)
T 1qyc_A 81 VISTV 85 (308)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 76543
No 198
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=20.40 E-value=1.2e+02 Score=25.84 Aligned_cols=58 Identities=21% Similarity=0.205 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcC-CCcch-hh--hcCcCEEEEcc
Q 005746 260 SMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDR-GEPSF-KT--SMKADLVIAGS 319 (679)
Q Consensus 260 smmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r-~~~sf-k~--~~kaDLVia~S 319 (679)
.-..+|..|.+.|++|.++. ......+++...++.++... .+... .. ..++|+|+..+
T Consensus 17 iG~~la~~L~~~g~~V~~id--~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~ 78 (141)
T 3llv_A 17 AGVGLVRELTAAGKKVLAVD--KSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITG 78 (141)
T ss_dssp HHHHHHHHHHHTTCCEEEEE--SCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECC
T ss_pred HHHHHHHHHHHCCCeEEEEE--CCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEec
Confidence 45678999999999998764 32334455667788877532 22222 21 24689988754
No 199
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=20.31 E-value=1.1e+02 Score=27.34 Aligned_cols=36 Identities=22% Similarity=0.173 Sum_probs=27.6
Q ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Q 005746 243 RKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVL 280 (679)
Q Consensus 243 rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvL 280 (679)
+.+|+++|.++.+.. ....++..|.+.|+.|.++-+
T Consensus 42 ~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 42 KALIFVSHGAGEHSG--RYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp SEEEEEECCTTCCGG--GGHHHHHHHHHTTEEEEEECC
T ss_pred CeEEEEECCCCchhh--HHHHHHHHHHhCCCcEEEeCC
Confidence 468899998765544 666789999999999876644
No 200
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=20.28 E-value=1.4e+02 Score=27.14 Aligned_cols=37 Identities=14% Similarity=0.149 Sum_probs=30.0
Q ss_pred eEEEEeCCCCCCC-HHHHHHHHHHHHHHCCCeEEEEEe
Q 005746 244 KFILIFHELSMTG-APLSMMELATELLSCGATVSAVVL 280 (679)
Q Consensus 244 KILlI~heLsmgG-AplsmmeLAteL~s~G~~VsaVvL 280 (679)
||+++++.-..|. .....+++|..+...|++|.++..
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~ 44 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFL 44 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEEC
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 6999998877764 567789999999999999987653
No 201
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=20.24 E-value=2.8e+02 Score=27.96 Aligned_cols=64 Identities=19% Similarity=0.254 Sum_probs=39.2
Q ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCCCChhHHhcCCeEEEEcCCCcchhhhcCcCEEEEcch
Q 005746 242 SRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRGGLMPELARRKIKVLEDRGEPSFKTSMKADLVIAGSA 320 (679)
Q Consensus 242 ~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~GgL~~EL~rrgIkVl~~r~~~sfk~~~kaDLVia~Sa 320 (679)
.+++++| +.||+.+. ++..|.+.|.+|+++ ++...-.++|++.++.+.... +. ..+|+||..+.
T Consensus 118 ~k~vlvl----GaGGaara---ia~~L~~~G~~v~V~--nRt~~ka~~la~~~~~~~~~~-~l-----~~~DiVInaTp 181 (269)
T 3phh_A 118 YQNALIL----GAGGSAKA---LACELKKQGLQVSVL--NRSSRGLDFFQRLGCDCFMEP-PK-----SAFDLIINATS 181 (269)
T ss_dssp CCEEEEE----CCSHHHHH---HHHHHHHTTCEEEEE--CSSCTTHHHHHHHTCEEESSC-CS-----SCCSEEEECCT
T ss_pred CCEEEEE----CCCHHHHH---HHHHHHHCCCEEEEE--eCCHHHHHHHHHCCCeEecHH-Hh-----ccCCEEEEccc
Confidence 4567665 55787764 445777889887655 454444555655556655321 11 17899987654
No 202
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=20.21 E-value=69 Score=31.03 Aligned_cols=34 Identities=21% Similarity=0.053 Sum_probs=21.8
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEE
Q 005746 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVV 279 (679)
Q Consensus 241 ~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVv 279 (679)
...|+++|+-. +.-.-..+|..|++.|++|.++.
T Consensus 25 ~~~k~~lVTGa-----s~GIG~aia~~la~~G~~Vv~~~ 58 (267)
T 3u5t_A 25 ETNKVAIVTGA-----SRGIGAAIAARLASDGFTVVINY 58 (267)
T ss_dssp --CCEEEEESC-----SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred cCCCEEEEeCC-----CCHHHHHHHHHHHHCCCEEEEEc
Confidence 34577777432 22234588999999999987643
No 203
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=20.18 E-value=1.4e+02 Score=29.11 Aligned_cols=74 Identities=15% Similarity=0.155 Sum_probs=41.9
Q ss_pred CCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHC--CCeEEEEEeCCCCCC-hhHHhcCCeEEEEcCC-C----cch-----
Q 005746 240 VWSRKFILIFHELSMTGAPLSMMELATELLSC--GATVSAVVLSKRGGL-MPELARRKIKVLEDRG-E----PSF----- 306 (679)
Q Consensus 240 ~~~rKILlI~heLsmgGAplsmmeLAteL~s~--G~~VsaVvLs~~GgL-~~EL~rrgIkVl~~r~-~----~sf----- 306 (679)
|.++||++++ |-+|. .+..|...+.+. .++|.+|+..++... .+...+.||+++.... . ..|
T Consensus 5 m~~~ri~vl~---SG~gs--nl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~~~~~r~~~d~~~~ 79 (209)
T 4ds3_A 5 MKRNRVVIFI---SGGGS--NMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRKDFASKEAHEDAIL 79 (209)
T ss_dssp -CCEEEEEEE---SSCCH--HHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCGGGSSSHHHHHHHHH
T ss_pred CCCccEEEEE---ECCcH--HHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCccccCCHHHHHHHHH
Confidence 4456777662 23343 566677666553 368887765554433 2344568999886321 1 111
Q ss_pred --hhhcCcCEEEEc
Q 005746 307 --KTSMKADLVIAG 318 (679)
Q Consensus 307 --k~~~kaDLVia~ 318 (679)
-...++|+++.-
T Consensus 80 ~~l~~~~~Dliv~a 93 (209)
T 4ds3_A 80 AALDVLKPDIICLA 93 (209)
T ss_dssp HHHHHHCCSEEEES
T ss_pred HHHHhcCCCEEEEe
Confidence 134689999764
No 204
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=20.17 E-value=84 Score=30.85 Aligned_cols=39 Identities=23% Similarity=0.262 Sum_probs=28.3
Q ss_pred CCCeEEEEeCCCCCCCHHHH-HHHHHHHHHHCCCeEEEEEeCCC
Q 005746 241 WSRKFILIFHELSMTGAPLS-MMELATELLSCGATVSAVVLSKR 283 (679)
Q Consensus 241 ~~rKILlI~heLsmgGApls-mmeLAteL~s~G~~VsaVvLs~~ 283 (679)
.++||++.+.. ++|..- ..+|++.|.+.|++|++|. ++.
T Consensus 4 ~~k~IllgiTG---siaayk~~~~ll~~L~~~g~eV~vv~-T~~ 43 (207)
T 3mcu_A 4 KGKRIGFGFTG---SHCTYEEVMPHLEKLIAEGAEVRPVV-SYT 43 (207)
T ss_dssp TTCEEEEEECS---CGGGGTTSHHHHHHHHHTTCEEEEEE-CC-
T ss_pred CCCEEEEEEEC---hHHHHHHHHHHHHHHHhCCCEEEEEE-ehH
Confidence 34788888665 345444 7899999999999999764 543
No 205
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=20.01 E-value=68 Score=30.62 Aligned_cols=74 Identities=16% Similarity=0.205 Sum_probs=41.5
Q ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHCCCeEEEEEeCCCC-CCh-hH-Hhc-CCeEEEEcCCCc---chhhhcCcC
Q 005746 241 WSRKFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKRG-GLM-PE-LAR-RKIKVLEDRGEP---SFKTSMKAD 313 (679)
Q Consensus 241 ~~rKILlI~heLsmgGAplsmmeLAteL~s~G~~VsaVvLs~~G-gL~-~E-L~r-rgIkVl~~r~~~---sfk~~~kaD 313 (679)
+.+||++.+..- .|+. ...+|++.|.+.|++|+++. ++.. .+. ++ +.. .+ +|+.+.... ...-+..+|
T Consensus 4 m~k~IllgvTGs--~aa~-k~~~ll~~L~~~g~~V~vv~-T~~A~~fi~~~~l~~l~~-~v~~~~~~~~~~hi~l~~~aD 78 (175)
T 3qjg_A 4 MGENVLICLCGS--VNSI-NISHYIIELKSKFDEVNVIA-STNGRKFINGEILKQFCD-NYYDEFEDPFLNHVDIANKHD 78 (175)
T ss_dssp -CCEEEEEECSS--GGGG-GHHHHHHHHTTTCSEEEEEE-CTGGGGGSCHHHHHHHCS-CEECTTTCTTCCHHHHHHTCS
T ss_pred CCCEEEEEEeCH--HHHH-HHHHHHHHHHHCCCEEEEEE-CcCHHHHhhHHHHHHhcC-CEEecCCCCccccccccchhC
Confidence 347888775442 3333 57899999999999999764 5433 121 11 221 23 676553211 122345678
Q ss_pred EEEEcc
Q 005746 314 LVIAGS 319 (679)
Q Consensus 314 LVia~S 319 (679)
+++.-.
T Consensus 79 ~~vVaP 84 (175)
T 3qjg_A 79 KIIILP 84 (175)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 776543
Done!